Query 003063
Match_columns 851
No_of_seqs 204 out of 343
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 11:57:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ul4_A SPL4, squamosa promoter 100.0 1.7E-39 5.9E-44 292.3 -0.2 90 142-231 3-92 (94)
2 1ul5_A SPL7, squamosa promoter 100.0 2.8E-38 9.7E-43 281.6 -0.7 83 146-228 2-84 (88)
3 1wj0_A Squamosa promoter-bindi 99.9 3.1E-29 1E-33 209.7 1.2 59 146-204 2-60 (60)
4 4gpm_A Engineered protein OR26 98.3 1.2E-06 4.1E-11 84.2 7.8 85 719-837 73-157 (169)
5 3aaa_C Myotrophin, protein V-1 98.2 1.1E-06 3.9E-11 77.8 6.2 86 717-836 8-93 (123)
6 1n0q_A 3ANK, 3 ankyrin repeats 98.2 1.2E-06 4.1E-11 74.3 6.1 84 719-836 5-88 (93)
7 4gpm_A Engineered protein OR26 98.2 2.2E-06 7.5E-11 82.4 6.5 84 719-836 40-123 (169)
8 2zgd_A 3 repeat synthetic anky 98.1 3.1E-06 1.1E-10 74.4 6.2 86 716-835 24-109 (110)
9 1k1a_A B-cell lymphoma 3-encod 98.1 7.5E-06 2.6E-10 79.0 8.6 58 719-781 12-69 (241)
10 3deo_A Signal recognition part 98.1 5.3E-06 1.8E-10 78.7 7.2 85 716-835 44-129 (183)
11 1n0q_A 3ANK, 3 ankyrin repeats 98.1 3.2E-06 1.1E-10 71.6 5.0 54 758-836 2-55 (93)
12 3c5r_A BARD-1, BRCA1-associate 98.0 4.3E-06 1.5E-10 75.2 5.3 83 719-835 13-95 (137)
13 2jab_A H10-2-G3; HER2, darpin, 98.0 6.7E-06 2.3E-10 74.2 6.1 85 717-835 15-99 (136)
14 2jab_A H10-2-G3; HER2, darpin, 98.0 7E-06 2.4E-10 74.1 6.0 84 719-836 50-133 (136)
15 3twr_A Tankyrase-2; ankyrin re 98.0 8.5E-06 2.9E-10 75.1 6.7 54 718-780 44-97 (165)
16 2l6b_A NR1C; ankyrin, consensu 98.0 3.9E-06 1.3E-10 73.3 4.1 85 719-837 12-96 (115)
17 1d9s_A Cyclin-dependent kinase 98.0 7.4E-06 2.5E-10 73.9 6.0 83 719-836 48-131 (136)
18 1awc_B Protein (GA binding pro 98.0 9.9E-06 3.4E-10 74.1 6.7 54 758-836 67-120 (153)
19 3jxi_A Vanilloid receptor-rela 98.0 7.3E-06 2.5E-10 80.8 6.2 102 719-837 49-161 (260)
20 1ycs_B 53BP2, P53BP2; ankyrin 98.0 4.9E-06 1.7E-10 82.4 4.9 84 718-835 39-122 (239)
21 3twr_A Tankyrase-2; ankyrin re 98.0 1.2E-05 4.1E-10 74.1 7.1 85 719-838 78-162 (165)
22 1n0r_A 4ANK, 4 ankyrin repeats 98.0 1.2E-05 4E-10 69.7 6.6 53 719-780 5-57 (126)
23 3v30_A DNA-binding protein rfx 98.0 7.3E-06 2.5E-10 76.0 5.6 108 720-836 6-122 (172)
24 2vge_A RELA-associated inhibit 97.9 9.4E-06 3.2E-10 80.9 6.7 54 718-780 23-76 (229)
25 2rfm_A Putative ankyrin repeat 97.9 1.1E-05 3.7E-10 76.4 6.8 83 719-835 71-153 (192)
26 1oy3_D Transcription factor in 97.9 1.2E-05 4.3E-10 79.1 7.4 85 719-836 161-245 (282)
27 3ehr_A Osteoclast-stimulating 97.9 7.4E-06 2.5E-10 79.5 5.7 84 719-835 76-159 (222)
28 3ui2_A Signal recognition part 97.9 1E-05 3.5E-10 80.9 6.8 85 717-836 46-131 (244)
29 1awc_B Protein (GA binding pro 97.9 7.8E-06 2.7E-10 74.8 5.5 53 758-835 100-152 (153)
30 4hbd_A KN motif and ankyrin re 97.9 1.3E-05 4.4E-10 81.6 7.1 55 758-837 183-237 (276)
31 3f6q_A Integrin-linked protein 97.9 1.3E-05 4.5E-10 75.2 6.6 54 719-781 42-95 (179)
32 3v31_A Ankyrin repeat family A 97.9 1.3E-05 4.4E-10 74.0 6.4 83 719-835 39-121 (167)
33 1bd8_A P19INK4D CDK4/6 inhibit 97.9 1.5E-05 5.2E-10 72.6 6.7 82 719-835 39-120 (156)
34 3v30_A DNA-binding protein rfx 97.9 1.7E-05 5.8E-10 73.6 7.1 29 806-835 126-154 (172)
35 1ihb_A P18-INK4C(INK6), cyclin 97.9 1.5E-05 5.1E-10 72.9 6.6 82 719-835 41-122 (162)
36 1oy3_D Transcription factor in 97.9 2.2E-05 7.6E-10 77.3 8.3 87 719-837 12-99 (282)
37 3f6q_A Integrin-linked protein 97.9 1.1E-05 3.6E-10 75.8 5.7 54 720-781 9-62 (179)
38 4b93_B Ankyrin repeat domain-c 97.9 1.1E-05 3.7E-10 82.5 5.8 53 719-780 122-174 (269)
39 2y1l_E Darpin-8.4; hydrolase-i 97.9 1.8E-05 6.2E-10 73.7 6.7 83 719-835 50-132 (169)
40 2rfm_A Putative ankyrin repeat 97.9 1.2E-05 4.2E-10 76.0 5.6 84 719-836 38-121 (192)
41 3v31_A Ankyrin repeat family A 97.9 1.7E-05 5.7E-10 73.3 6.3 84 719-836 72-155 (167)
42 1dcq_A PYK2-associated protein 97.9 1.5E-05 5E-10 82.2 6.5 83 719-835 172-257 (278)
43 1ihb_A P18-INK4C(INK6), cyclin 97.9 1.6E-05 5.6E-10 72.6 6.1 85 719-836 73-157 (162)
44 1ikn_D Protein (I-kappa-B-alph 97.8 1.6E-05 5.4E-10 77.5 6.1 85 719-836 120-204 (236)
45 3c5r_A BARD-1, BRCA1-associate 97.8 1.3E-05 4.3E-10 72.1 5.0 85 719-837 46-130 (137)
46 1n0r_A 4ANK, 4 ankyrin repeats 97.8 2.1E-05 7.3E-10 68.0 6.2 84 719-836 38-121 (126)
47 1k1a_A B-cell lymphoma 3-encod 97.8 1.1E-05 3.7E-10 77.9 4.6 87 719-839 153-239 (241)
48 2dzn_A Probable 26S proteasome 97.8 2.1E-05 7.3E-10 75.4 6.6 85 719-836 110-194 (228)
49 2etb_A Transient receptor pote 97.8 2.1E-05 7.2E-10 77.6 6.7 104 719-837 46-157 (256)
50 1s70_B 130 kDa myosin-binding 97.8 1.7E-05 5.9E-10 79.4 6.2 86 717-836 41-126 (299)
51 1ikn_D Protein (I-kappa-B-alph 97.8 1.4E-05 4.8E-10 77.9 5.3 90 719-837 81-172 (236)
52 2etb_A Transient receptor pote 97.8 1.9E-05 6.6E-10 77.8 6.2 95 718-835 92-200 (256)
53 3jxi_A Vanilloid receptor-rela 97.8 1.5E-05 5.1E-10 78.6 5.4 94 719-835 96-204 (260)
54 2pnn_A Transient receptor pote 97.8 2E-05 6.9E-10 78.6 6.3 93 718-835 103-212 (273)
55 1wdy_A 2-5A-dependent ribonucl 97.8 2.2E-05 7.6E-10 76.8 6.2 55 718-780 7-61 (285)
56 2y1l_E Darpin-8.4; hydrolase-i 97.8 2.5E-05 8.5E-10 72.8 6.2 87 717-837 15-101 (169)
57 4hbd_A KN motif and ankyrin re 97.8 2E-05 6.9E-10 80.1 6.1 86 719-837 186-271 (276)
58 1d9s_A Cyclin-dependent kinase 97.8 2E-05 6.7E-10 71.1 5.2 24 758-781 12-35 (136)
59 4b93_B Ankyrin repeat domain-c 97.8 1.8E-05 6E-10 80.9 5.3 81 719-835 155-235 (269)
60 2rfa_A Transient receptor pote 97.8 5.5E-05 1.9E-09 73.1 8.5 59 719-781 40-98 (232)
61 1s70_B 130 kDa myosin-binding 97.8 2.6E-05 9E-10 78.1 6.3 54 758-836 199-252 (299)
62 2rfa_A Transient receptor pote 97.8 3.8E-05 1.3E-09 74.2 7.2 91 718-835 77-177 (232)
63 1bi7_B P16INK4A, MTS1, multipl 97.7 4E-05 1.4E-09 70.7 6.8 77 726-836 54-131 (156)
64 3aaa_C Myotrophin, protein V-1 97.7 3.6E-05 1.2E-09 68.0 6.2 80 719-835 43-122 (123)
65 3kea_A K1L; tropism, ANK repea 97.7 3.2E-05 1.1E-09 78.9 6.6 51 719-780 34-84 (285)
66 3hra_A Ankyrin repeat family p 97.7 2.6E-05 8.9E-10 73.5 5.4 55 719-781 8-62 (201)
67 3hra_A Ankyrin repeat family p 97.7 3.7E-05 1.3E-09 72.5 6.4 54 758-836 140-198 (201)
68 2vge_A RELA-associated inhibit 97.7 5.4E-05 1.9E-09 75.4 7.9 84 719-835 57-142 (229)
69 3eu9_A Huntingtin-interacting 97.7 4E-05 1.4E-09 73.3 6.5 62 758-844 177-238 (240)
70 3ljn_A Hypothetical protein; a 97.7 2.9E-05 9.9E-10 80.7 5.9 88 719-836 176-264 (364)
71 3aji_A 26S proteasome non-ATPa 97.7 4.2E-05 1.4E-09 73.7 6.4 83 719-835 109-191 (231)
72 2l6b_A NR1C; ankyrin, consensu 97.7 2.9E-05 9.8E-10 67.7 4.8 55 758-837 9-63 (115)
73 1bd8_A P19INK4D CDK4/6 inhibit 97.7 4.2E-05 1.4E-09 69.6 6.0 87 717-837 3-89 (156)
74 3ljn_A Hypothetical protein; a 97.7 5.8E-05 2E-09 78.5 7.8 91 718-837 140-232 (364)
75 2dzn_A Probable 26S proteasome 97.7 3.2E-05 1.1E-09 74.1 5.4 86 719-836 75-160 (228)
76 2f8y_A Notch homolog 1, transl 97.7 4.3E-05 1.5E-09 73.2 6.0 53 719-780 95-147 (223)
77 2pnn_A Transient receptor pote 97.7 5.6E-05 1.9E-09 75.4 7.0 102 719-837 57-169 (273)
78 3b7b_A Euchromatic histone-lys 97.7 5.1E-05 1.8E-09 73.4 6.4 83 719-835 114-196 (237)
79 2zgd_A 3 repeat synthetic anky 97.7 4.2E-05 1.4E-09 67.1 5.3 55 757-836 23-77 (110)
80 3utm_A Tankyrase-1; tankyrase, 97.6 5.9E-05 2E-09 76.3 6.7 86 718-837 60-145 (351)
81 3utm_A Tankyrase-1; tankyrase, 97.6 5.8E-05 2E-09 76.3 6.5 84 719-836 214-300 (351)
82 4g8k_A 2-5A-dependent ribonucl 97.6 4.3E-05 1.5E-09 78.6 5.5 56 757-837 24-80 (337)
83 1yyh_A HN1;, notch 1, ankyrin 97.6 3.2E-05 1.1E-09 76.7 4.4 53 719-780 127-179 (253)
84 2b0o_E UPLC1; arfgap, structur 97.6 6.6E-05 2.2E-09 78.3 6.8 84 719-836 193-279 (301)
85 1wdy_A 2-5A-dependent ribonucl 97.6 7.7E-05 2.6E-09 73.0 6.9 56 757-836 218-273 (285)
86 1yyh_A HN1;, notch 1, ankyrin 97.6 5.8E-05 2E-09 74.8 6.1 85 719-837 160-244 (253)
87 2xai_A ASB-9, ankyrin repeat a 97.6 5.6E-05 1.9E-09 75.5 5.8 53 719-780 6-58 (261)
88 2f8y_A Notch homolog 1, transl 97.6 8.7E-05 3E-09 71.1 6.9 85 718-836 127-211 (223)
89 4g8k_A 2-5A-dependent ribonucl 97.6 9.9E-05 3.4E-09 75.9 7.7 55 757-835 238-292 (337)
90 3lvq_E ARF-GAP with SH3 domain 97.5 6.6E-05 2.3E-09 83.2 5.9 58 719-780 135-196 (497)
91 3aji_A 26S proteasome non-ATPa 97.5 9.2E-05 3.2E-09 71.3 6.1 108 719-836 43-159 (231)
92 3eu9_A Huntingtin-interacting 97.5 0.0001 3.5E-09 70.4 6.2 55 719-781 45-99 (240)
93 3lvq_E ARF-GAP with SH3 domain 97.5 8.4E-05 2.9E-09 82.4 6.3 84 719-836 174-260 (497)
94 3jue_A Arfgap with coiled-coil 97.5 0.00014 5E-09 78.7 8.0 28 807-835 293-320 (368)
95 3d9h_A CDNA FLJ77766, highly s 97.5 9.2E-05 3.1E-09 75.3 6.0 53 719-780 62-114 (285)
96 2fo1_E LIN-12 protein; beta-ba 97.5 0.00012 4E-09 77.5 7.0 85 719-836 282-366 (373)
97 1dcq_A PYK2-associated protein 97.5 7.1E-05 2.4E-09 77.0 5.0 54 758-836 169-225 (278)
98 3ui2_A Signal recognition part 97.5 5.4E-05 1.9E-09 75.6 4.0 87 719-837 80-181 (244)
99 2xai_A ASB-9, ankyrin repeat a 97.5 9.9E-05 3.4E-09 73.6 5.9 106 719-836 72-186 (261)
100 1n11_A Ankyrin; clathrin, BAND 97.5 0.00011 3.8E-09 78.1 6.3 28 807-835 369-396 (437)
101 3b7b_A Euchromatic histone-lys 97.5 0.00014 4.7E-09 70.4 6.2 108 719-836 14-131 (237)
102 1ycs_B 53BP2, P53BP2; ankyrin 97.4 0.00015 5.3E-09 71.6 6.6 84 719-835 73-158 (239)
103 3d9h_A CDNA FLJ77766, highly s 97.4 0.00016 5.3E-09 73.7 6.8 82 718-836 192-273 (285)
104 2fo1_E LIN-12 protein; beta-ba 97.4 8.6E-05 3E-09 78.6 4.7 59 718-781 127-189 (373)
105 1sw6_A Regulatory protein SWI6 97.4 0.00021 7.3E-09 74.4 7.6 45 757-825 282-326 (327)
106 3ehr_A Osteoclast-stimulating 97.4 0.0001 3.5E-09 71.4 4.9 57 757-838 72-128 (222)
107 3jue_A Arfgap with coiled-coil 97.4 0.00016 5.3E-09 78.5 6.5 53 758-835 235-287 (368)
108 3deo_A Signal recognition part 97.4 9.6E-05 3.3E-09 70.0 4.3 75 719-825 79-153 (183)
109 1bi7_B P16INK4A, MTS1, multipl 97.4 0.00016 5.4E-09 66.6 5.1 76 757-835 11-97 (156)
110 3kea_A K1L; tropism, ANK repea 97.3 0.00026 8.7E-09 72.2 7.0 29 807-836 186-215 (285)
111 1n11_A Ankyrin; clathrin, BAND 97.3 0.0002 6.9E-09 76.1 5.9 83 719-835 281-363 (437)
112 2b0o_E UPLC1; arfgap, structur 97.2 0.00022 7.6E-09 74.3 4.9 88 720-836 155-246 (301)
113 3t8k_A Uncharacterized protein 97.2 0.00047 1.6E-08 67.0 6.7 113 718-836 40-174 (186)
114 1sw6_A Regulatory protein SWI6 97.2 0.00026 9E-09 73.7 4.8 45 757-825 130-174 (327)
115 3t8k_A Uncharacterized protein 97.1 0.00026 9E-09 68.8 4.3 55 757-835 37-100 (186)
116 2aja_A Ankyrin repeat family p 97.1 0.00017 5.7E-09 78.4 2.3 93 718-839 130-222 (376)
117 2aja_A Ankyrin repeat family p 95.9 0.0032 1.1E-07 68.4 3.2 79 717-835 164-244 (376)
118 1uad_C RSEC5, exocyst complex 43.2 24 0.00081 31.6 4.4 39 547-587 7-46 (99)
119 4hw6_A Hypothetical protein, I 40.7 45 0.0015 36.4 7.1 44 545-590 16-60 (433)
120 2cxk_A Camta1, calmodulin bind 38.7 65 0.0022 28.8 6.6 45 547-592 6-50 (95)
121 3hrp_A Uncharacterized protein 28.7 1.1E+02 0.0038 32.7 7.6 40 545-586 14-54 (409)
122 3tc9_A Hypothetical hydrolase; 27.9 1.1E+02 0.0037 33.2 7.4 67 548-632 18-86 (430)
No 1
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=1.7e-39 Score=292.26 Aligned_cols=90 Identities=63% Similarity=1.075 Sum_probs=80.4
Q ss_pred CCCCCCCceeccCCchhhccCchhhcccccchhhcCcceeeeCCchhhhhHhhhcCcccccccCCcchHHHHHhhhhhhh
Q 003063 142 GGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRR 221 (851)
Q Consensus 142 ~~~~~~~~CqV~gC~~dL~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFd~~krSCr~~L~~hn~RR 221 (851)
+++++.++||||||++||+.+|.||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||
T Consensus 3 ~~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~RR 82 (94)
T 1ul4_A 3 SGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERR 82 (94)
T ss_dssp -----CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCC
T ss_pred CCCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHHh
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcCC
Q 003063 222 RKTNPDAVAN 231 (851)
Q Consensus 222 Rk~~~~~~~~ 231 (851)
||+++++...
T Consensus 83 Rk~~~~~~~~ 92 (94)
T 1ul4_A 83 RKSSGESGPS 92 (94)
T ss_dssp CSCCCC----
T ss_pred ccCCCCcCCC
Confidence 9999987643
No 2
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=2.8e-38 Score=281.61 Aligned_cols=83 Identities=52% Similarity=0.962 Sum_probs=79.4
Q ss_pred CCCceeccCCchhhccCchhhcccccchhhcCcceeeeCCchhhhhHhhhcCcccccccCCcchHHHHHhhhhhhhccCC
Q 003063 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTN 225 (851)
Q Consensus 146 ~~~~CqV~gC~~dL~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFd~~krSCr~~L~~hn~RRRk~~ 225 (851)
+.++||||||++||+.+|.||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||++
T Consensus 2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~ 81 (88)
T 1ul5_A 2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP 81 (88)
T ss_dssp -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 003063 226 PDA 228 (851)
Q Consensus 226 ~~~ 228 (851)
++.
T Consensus 82 ~~~ 84 (88)
T 1ul5_A 82 VDK 84 (88)
T ss_dssp CSS
T ss_pred ccC
Confidence 765
No 3
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.95 E-value=3.1e-29 Score=209.70 Aligned_cols=59 Identities=78% Similarity=1.372 Sum_probs=57.2
Q ss_pred CCCceeccCCchhhccCchhhcccccchhhcCcceeeeCCchhhhhHhhhcCccccccc
Q 003063 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFD 204 (851)
Q Consensus 146 ~~~~CqV~gC~~dL~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFd 204 (851)
+.++|||+||++||+.+|+|||||||||.|+||++|+++|.++||||||+|||+|+|||
T Consensus 2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 46899999999999999999999999999999999999999999999999999999998
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.29 E-value=1.2e-06 Score=84.23 Aligned_cols=85 Identities=21% Similarity=0.294 Sum_probs=65.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
-|-+|+.++...+++.||. .+.+..... -.+.||||+||+.++.+||++||.+.
T Consensus 73 pLh~A~~~g~~~~v~~Ll~----~gadvn~~d-----~~G~TpLh~A~~~g~~~~v~~Ll~~g----------------- 126 (169)
T 4gpm_A 73 PLHHAAENGHKEVVKLLIS----KGADVNAKD-----SDGRTPLHHAAENGHKEVVKLLISKG----------------- 126 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHH----TTCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHH----CcCCCCCCC-----CCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 5778889999999988876 223222111 24679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
-+++..+..|.||||+|+.. |..+|++.|-+
T Consensus 127 -------ad~~~~d~~G~TpL~~A~~~-g~~~iv~~Ll~ 157 (169)
T 4gpm_A 127 -------ADVNTSDSDGRTPLDLAREH-GNEEVVKLLEK 157 (169)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHT
T ss_pred -------CCccccCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 24566788899999999987 89999999844
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.25 E-value=1.1e-06 Score=77.75 Aligned_cols=86 Identities=14% Similarity=0.054 Sum_probs=65.7
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~ 796 (851)
...|-+|+..+...+++.||.. ..+.... .-.+.++||+|++.+..+||++|+.+.
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~----~~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------- 63 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAK----GEDVNRT-----LEGGRKPLHYAADCGQLEILEFLLLKG--------------- 63 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----TCCTTSC-----CTTSSCHHHHHHHTTCHHHHHHHHTTT---------------
T ss_pred chHHHHHHHcCCHHHHHHHHHc----CCCcCcc-----CCCCCcHHHHHHHcCCHHHHHHHHHcC---------------
Confidence 3467889999999999998872 1221111 113679999999999999999999763
Q ss_pred ccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 797 v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. +..+++..|-
T Consensus 64 ---------~~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll 93 (123)
T 3aaa_C 64 ---------ADINAPDKHHITPLLSAVYE-GHVSCVKLLL 93 (123)
T ss_dssp ---------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred ---------CCCCcCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 23566678899999999987 7889999983
No 6
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=98.25 E-value=1.2e-06 Score=74.26 Aligned_cols=84 Identities=26% Similarity=0.300 Sum_probs=63.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+..... -.+.|+||+|++.+..+||++|+.+.
T Consensus 5 ~L~~A~~~~~~~~v~~Ll~~----g~~~n~~d-----~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 58 (93)
T 1n0q_A 5 PLHLAARNGHLEVVKLLLEA----GADVNAKD-----KNGRTPLHLAARNGHLEVVKLLLEAG----------------- 58 (93)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCcccC-----CCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 35677777778888887762 22222111 13679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. |..++++.|-
T Consensus 59 -------a~~~~~d~~g~t~l~~A~~~-~~~~~~~~Ll 88 (93)
T 1n0q_A 59 -------ADVNAKDKNGRTPLHLAARN-GHLEVVKLLL 88 (93)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred -------CCCCccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 23456678899999999987 7899999884
No 7
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.16 E-value=2.2e-06 Score=82.36 Aligned_cols=84 Identities=23% Similarity=0.292 Sum_probs=65.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+++..+...+++.||.. +.+.... --.+.||||+||++++.++|++||.+.
T Consensus 40 ~l~~a~~~~~~~~~~~ll~~----gad~~~~-----d~~g~TpLh~A~~~g~~~~v~~Ll~~g----------------- 93 (169)
T 4gpm_A 40 PLHHAAENGHKEVVKLLISK----GADVNAK-----DSDGRTPLHHAAENGHKEVVKLLISKG----------------- 93 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHhc----ccchhhh-----ccCCCCHHHHHHHcCCHHHHHHHHHCc-----------------
Confidence 56778888888888888762 2222111 124679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-+++..+..|+||||+||.. |..+++..|-
T Consensus 94 -------advn~~d~~G~TpLh~A~~~-g~~~~v~~Ll 123 (169)
T 4gpm_A 94 -------ADVNAKDSDGRTPLHHAAEN-GHKEVVKLLI 123 (169)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred -------CCCCCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 24567788999999999987 8999999993
No 8
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.12 E-value=3.1e-06 Score=74.40 Aligned_cols=86 Identities=20% Similarity=0.144 Sum_probs=66.0
Q ss_pred HhHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccc
Q 003063 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 716 fr~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
....|-+|+..+-..+++.||.. +.+.... .-.+.++||+||+.++.+||++||.+.
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~----g~~i~~~-----d~~g~tpLh~A~~~~~~~~v~~Ll~~g-------------- 80 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMAN----GADVAAK-----DKNGSTPLHLAARNGHLEVVKLLLEAG-------------- 80 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT----TCCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTT--------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHc----CCCCCcc-----CCCCCCHHHHHHHcCCHHHHHHHHHcC--------------
Confidence 35577889999999999988863 2222111 124679999999999999999999763
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|+||||+|+.. +..++++.|
T Consensus 81 ----------a~~~~~d~~g~tpl~~A~~~-~~~~~~~~L 109 (110)
T 2zgd_A 81 ----------ADVXAQDKFGKTAFDISIDN-GNEDLAEIL 109 (110)
T ss_dssp ----------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred ----------CCccccccCCCcHHHHHHHc-CCHHHHHHh
Confidence 23456678899999999987 788898876
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.08 E-value=7.5e-06 Score=79.03 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=44.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
.|-+|+.++-..+++.||..+.....+..... -.+.++||+|++.++.+||++|+.+.
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g 69 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-----NLRQTPLHLAVITTLPSVVRLLVTAG 69 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCCccc-----ccCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 67888999999999999998876554433221 13668888888888888888888753
No 10
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.07 E-value=5.3e-06 Score=78.71 Aligned_cols=85 Identities=24% Similarity=0.138 Sum_probs=63.1
Q ss_pred HhHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccc
Q 003063 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 716 fr~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
-+..|-+|+.++-..+++.||. ...++.- --.+.|+||+|++.++.+||++|+.+.
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~-------d~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------- 99 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE---DRDVDAV-------DENGRTALLFVAGLGSDKCVRLLAEAG-------------- 99 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT---TSCTTCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTT--------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHh---cCCCCCc-------CCCCCCHHHHHHHcCCHHHHHHHHHcC--------------
Confidence 3456778888888888888887 2222211 114679999999999999999999763
Q ss_pred cccCcccccccCCCCCC-CCCCchhhhhcccCCchhHHHhh
Q 003063 796 LVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~G-p~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+++..+ ..|.||||+|+.. |..++++.|
T Consensus 100 ----------a~~~~~~~~~g~tpL~~A~~~-~~~~~v~~L 129 (183)
T 3deo_A 100 ----------ADLDHRDMRGGLTALHMAAGY-VRPEVVEAL 129 (183)
T ss_dssp ----------CCTTCCCSSSSCCHHHHHHHT-TCHHHHHHH
T ss_pred ----------CCCCcCCCCCCCCHHHHHHhc-CcHHHHHHH
Confidence 2234444 7799999999876 788899888
No 11
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=98.06 E-value=3.2e-06 Score=71.59 Aligned_cols=54 Identities=31% Similarity=0.363 Sum_probs=45.8
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
+.|+||.|++.+..++|++|+... .+++..+..|.||||+|+.. +..++++.|-
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g------------------------~~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll 55 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG------------------------ADVNAKDKNGRTPLHLAARN-GHLEVVKLLL 55 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT------------------------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC------------------------CCCcccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 569999999999999999999763 23566778899999999987 7899999983
No 12
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.03 E-value=4.3e-06 Score=75.15 Aligned_cols=83 Identities=23% Similarity=0.226 Sum_probs=48.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+..... -.+.++||+|+..++.+||++|+.+.
T Consensus 13 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~~~~Ll~~g----------------- 66 (137)
T 3c5r_A 13 LLHIASIKGDIPSVEYLLQN----GSDPNVKD-----HAGWTPLHEACNHGHLKVVELLLQHK----------------- 66 (137)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSCCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCcCC-----CCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 56667777777777777752 11111110 13567777777777777777777653
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+|+.. +..+++..|
T Consensus 67 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 95 (137)
T 3c5r_A 67 -------ALVNTTGYQNDSPLHDAAKN-GHVDIVKLL 95 (137)
T ss_dssp -------CCTTCCCGGGCCHHHHHHHT-TCHHHHHHH
T ss_pred -------CcccCcCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 11233445566666666654 556666666
No 13
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.00 E-value=6.7e-06 Score=74.19 Aligned_cols=85 Identities=19% Similarity=0.167 Sum_probs=52.0
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~ 796 (851)
...|-+|+..+-..+++.||.. +.+.... .-.+.++||+||..+..+||++|+.+.
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------- 70 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMAN----GADVNAK-----DEYGLTPLYLATAHGHLEIVEVLLKNG--------------- 70 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTT---------------
T ss_pred cHHHHHHHHhCCHHHHHHHHHc----CCCCCCc-----CCCCCCHHHHHHHcCCHHHHHHHHHcC---------------
Confidence 4567788888888888888763 1221111 013567888888888888888888653
Q ss_pred ccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 797 v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+||.. |..+++..|
T Consensus 71 ---------~~~~~~d~~g~t~L~~A~~~-~~~~~v~~L 99 (136)
T 2jab_A 71 ---------ADVNAVDAIGFTPLHLAAFI-GHLEIAEVL 99 (136)
T ss_dssp ---------CCTTCCCTTCCCHHHHHHHH-TCHHHHHHH
T ss_pred ---------CCCCcCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 12233445566666666654 455566555
No 14
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=97.99 E-value=7e-06 Score=74.06 Aligned_cols=84 Identities=20% Similarity=0.252 Sum_probs=64.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+.... --.+.++||+|++.++.+||++|+.+.
T Consensus 50 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----d~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 103 (136)
T 2jab_A 50 PLYLATAHGHLEIVEVLLKN----GADVNAV-----DAIGFTPLHLAAFIGHLEIAEVLLKHG----------------- 103 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCC-----CTTCCCHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCcC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 67788888888888888873 2221111 113679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. +..+|++.|.
T Consensus 104 -------~~~~~~~~~g~tpl~~A~~~-~~~~~~~~Ll 133 (136)
T 2jab_A 104 -------ADVNAQDKFGKTAFDISIGN-GNEDLAEILQ 133 (136)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred -------CCCcCcCCCCCCHHHHHHHC-CCHHHHHHHH
Confidence 23456678899999999987 7899999884
No 15
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=97.99 E-value=8.5e-06 Score=75.09 Aligned_cols=54 Identities=20% Similarity=0.221 Sum_probs=36.5
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
..|-+|+..+-..+++.||.. +.+..... -.+.|+||+|++.++.+||++|+.+
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~ 97 (165)
T 3twr_A 44 TPLHFAAGYNRVSVVEYLLQH----GADVHAKD-----KGGLVPLHNACSYGHYEVAELLVKH 97 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHcChHHHHHHHHhc----CCCCCccC-----CCCCCHHHHHHHcCcHHHHHHHHhC
Confidence 367788888888888888873 22211111 1356888888888888888888865
No 16
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=97.99 E-value=3.9e-06 Score=73.26 Aligned_cols=85 Identities=22% Similarity=0.253 Sum_probs=63.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+..... ..+.++||+||..+..+||++|+.+.
T Consensus 12 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~d-----~~g~t~L~~A~~~~~~~~~~~Ll~~g----------------- 65 (115)
T 2l6b_A 12 PLHNAAKNGHAEEVKKLLSK----GADVNARS-----KDGNTPLHLAAKNGHAEIVKLLLAKG----------------- 65 (115)
T ss_dssp HHHHHHHHTCHHHHHHHTTT----TCCSSCCC-----SSSCCTTHHHHTTTCHHHHHHHTTTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCcC-----CCCCCHHHHHHHcCcHHHHHHHHHcC-----------------
Confidence 56677777777777777652 22221111 24679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++..+..|.||||+|+.. +..+|++.|-+
T Consensus 66 -------~~~~~~d~~g~tpl~~A~~~-~~~~~~~~Ll~ 96 (115)
T 2l6b_A 66 -------ADVNARSKDGNTPEHLAKKN-GHHEIVKLLDA 96 (115)
T ss_dssp -------CCTTCCCTTCCCTTHHHHTT-TCHHHHHHHHT
T ss_pred -------CCCcccCCCCCCHHHHHHHC-CCHHHHHHHHH
Confidence 23456677899999999988 78999999843
No 17
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=97.98 E-value=7.4e-06 Score=73.90 Aligned_cols=83 Identities=23% Similarity=0.163 Sum_probs=62.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHh-hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALT-ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~-em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
.|-+|+. +-..+++.||.. +.+.... --. +.|+||+|++.++.+||++|+.+.
T Consensus 48 ~L~~A~~-~~~~~v~~Ll~~----g~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---------------- 101 (136)
T 1d9s_A 48 PIQVMMM-GSAQVAELLLLH----GAEPNCA-----DPATLTRPVHDAAREGFLDTLVVLHRAG---------------- 101 (136)
T ss_dssp TTTTSTT-SCHHHHHHHHHH----TCCSSCC-----BTTTTBCHHHHHHHHTCHHHHHHHHHTC----------------
T ss_pred HHHHHHc-CCHHHHHHHHHC----CCCCCCc-----CCCCCCCHHHHHHHcCCHHHHHHHHHcC----------------
Confidence 4566777 888888888873 2221111 113 679999999999999999999763
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. +..+|++.|-
T Consensus 102 --------a~~~~~d~~g~tpl~~A~~~-~~~~~~~~Ll 131 (136)
T 1d9s_A 102 --------ARLDVCDAWGRLPVDLAEEQ-GHRDIARYLH 131 (136)
T ss_dssp --------CCCCCCSSSSSCHHHHHHHH-TCHHHHHHHH
T ss_pred --------CCCCccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 23566778999999999987 7899999883
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=97.97 E-value=9.9e-06 Score=74.11 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=37.4
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
+.|+||.|++.++.+||++|+.+. .+++..+..|.||||+|+.. |..+++..|-
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll~~g------------------------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 120 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLLKHG------------------------ADVNAKDMLKMTALHWATEH-NHQEVVELLI 120 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTT------------------------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHcC------------------------CCCCCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 346666666666666666666442 23566678889999998876 7888888883
No 19
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=97.96 E-value=7.3e-06 Score=80.83 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=63.7
Q ss_pred HHHHhc---cCchHHHHHHHHHHHHhccc-----cCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccc
Q 003063 719 LIEFSM---DHEWCAVVKKLLHILLDGTV-----SLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLG 790 (851)
Q Consensus 719 LL~Fsv---erdWcAVvkkLL~~l~~g~v-----~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~ 790 (851)
.|-+|+ ..+-..+++.||..-.+... +..... .-..+.|+||+|+..++.+||++||.+...-
T Consensus 49 ~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~---~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~------ 119 (260)
T 3jxi_A 49 CLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRD---VYYRGQTALHIAIERRCKHYVELLVEKGADV------ 119 (260)
T ss_dssp HHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCC---SSEESBCHHHHHHHTTCHHHHHHHHHTTCCT------
T ss_pred HHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccc---cccCCCCHHHHHHHcCCHHHHHHHHhCCCCc------
Confidence 455555 66777778888775433110 000000 0014679999999999999999999874221
Q ss_pred ccccccccCcccccccCCCCC---CCCCCchhhhhcccCCchhHHHhhhc
Q 003063 791 SENKALVDGVHKGFLFRPDVI---GPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 791 ~~~~~~v~~~~~~y~F~pd~~---Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+....+-.|.++-. ...|.||||+||.. |..+|+..|-+
T Consensus 120 -------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~ 161 (260)
T 3jxi_A 120 -------HAQARGRFFQPKDEGGYFYFGELPLSLAACT-NQPHIVHYLTE 161 (260)
T ss_dssp -------TCCCEECCCSSSCCCCSCCSCSSHHHHHHHT-TCHHHHHHHHH
T ss_pred -------CccccccccCcccccccccCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 11111122333222 25799999999987 88999999955
No 20
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=97.96 E-value=4.9e-06 Score=82.41 Aligned_cols=84 Identities=21% Similarity=0.191 Sum_probs=53.2
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
..|-+|+..+-..+++.||.. +.+.... --.+.|+||+|++.++.+||++||.+.
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~----g~~~~~~-----d~~g~t~L~~A~~~g~~~~v~~Ll~~g---------------- 93 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYE----VDDPSLP-----NDEGITALHNAVCAGHTEIVKFLVQFG---------------- 93 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTST----TSSCCCC-----CTTSCCHHHHHHHHTCHHHHHHHHHHT----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHc----CCCCCCc-----CCCCCCHHHHHHHcCCHHHHHHHHHcC----------------
Confidence 467777777778888877742 1121111 113668888888888888888888763
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+++..+..|.||||+||.. |..+|++.|
T Consensus 94 --------a~~~~~d~~g~tpL~~A~~~-~~~~~v~~L 122 (239)
T 1ycs_B 94 --------VNVNAADSDGWTPLHCAASC-NNVQVCKFL 122 (239)
T ss_dssp --------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHH
T ss_pred --------CCCCccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 12344455666666666655 566666666
No 21
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=97.96 E-value=1.2e-05 Score=74.13 Aligned_cols=85 Identities=22% Similarity=0.279 Sum_probs=65.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+.... -..+.|+||+|++.++.+||++|+.+.
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 131 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKH----GAVVNVA-----DLWKFTPLHEAAAKGKYEICKLLLQHG----------------- 131 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCcHHHHHHHHhC----CCCCCCc-----CCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 67788888889999888872 2221111 124679999999999999999999773
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcC
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 838 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~d 838 (851)
.+++..+..|.||||+|+. +..+|++.|.+.
T Consensus 132 -------a~~~~~~~~g~t~l~~a~~--~~~~i~~~L~~~ 162 (165)
T 3twr_A 132 -------ADPTKKNRDGNTPLDLVKD--GDTDIQDLLRGD 162 (165)
T ss_dssp -------CCTTCCCTTSCCTGGGSCT--TCHHHHHHHHTC
T ss_pred -------CCCcccCCCCCChhHhHhc--CChHHHHHHhhc
Confidence 3456778899999999765 788999999654
No 22
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=97.95 E-value=1.2e-05 Score=69.69 Aligned_cols=53 Identities=25% Similarity=0.228 Sum_probs=31.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.|.+|+..+...+++.||..= .+..... -.+.++||.||+.+..+||++|+.+
T Consensus 5 ~L~~A~~~~~~~~v~~Ll~~~----~~~~~~~-----~~g~t~L~~A~~~~~~~~~~~Ll~~ 57 (126)
T 1n0r_A 5 PLHLAARNGHLEVVKLLLEAG----ADVNAKD-----KNGRTPLHLAARNGHLEVVKLLLEA 57 (126)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT----CCTTCCC-----TTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcCcHHHHHHHHHcC----CCCCCcC-----CCCCcHHHHHHHcCcHHHHHHHHHc
Confidence 456677777777777777631 1111100 1245777777777777777777754
No 23
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=97.95 E-value=7.3e-06 Score=76.04 Aligned_cols=108 Identities=16% Similarity=0.048 Sum_probs=53.8
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccc-cccccccc--cccc
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE-VSDRLGSE--NKAL 796 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~-~~~~~~~~--~~~~ 796 (851)
|-+|+..+-..+++.||.. +...... .--.+.++||+||+.++.+||++|+.+...- ..+..+.. ..+.
T Consensus 6 L~~A~~~g~~~~v~~ll~~---~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRK---GDNLVNK-----PDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLAS 77 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTT---CSGGGGC-----CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHc---CcccccC-----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHH
Confidence 4556666667777777652 1100000 0113557777777777777777777653210 00000000 0000
Q ss_pred ccCccc------ccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 797 VDGVHK------GFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 797 v~~~~~------~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
..+... .+..+++..+..|.||||+|+.. |..++++.|-
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 122 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRG-NHVKCVEALL 122 (172)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 000000 01234556677888888888877 6778888773
No 24
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=97.95 E-value=9.4e-06 Score=80.86 Aligned_cols=54 Identities=19% Similarity=0.108 Sum_probs=35.9
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.+|-+|+..+-..+++.||..=. .++.- .-.+.|+||+||..+..+||++||.+
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~-------d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMN--DPSQP-------NEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSS--CTTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHhcCC--CCCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 46778888888888888886311 11110 11356788888888888888887765
No 25
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=97.95 E-value=1.1e-05 Score=76.37 Aligned_cols=83 Identities=14% Similarity=0.180 Sum_probs=56.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++...+++.||..= .+.... --.+.++||+|++.+..++|++|+.+.
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 124 (192)
T 2rfm_A 71 ALIWAVKNNRLGIAEKLLSKG----SNVNTK-----DFSGKTPLMWSIIFGYSEMSYFLLEHG----------------- 124 (192)
T ss_dssp HHHHHHHTTCHHHHHHHHHHT----CCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHCC----CCCCCC-----CCCCCcHHHHHHHcCCHHHHHHHHHCC-----------------
Confidence 577888888889999888741 111111 113668999999999999999998763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+||.. |..+++..|
T Consensus 125 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 153 (192)
T 2rfm_A 125 -------ANVNDRNLEGETPLIVASKY-GRSEIVKKL 153 (192)
T ss_dssp -------CCSSCCCTTCCCHHHHHHHH-TCHHHHHHH
T ss_pred -------CCCCCCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 22344556677777777665 566666666
No 26
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=97.95 E-value=1.2e-05 Score=79.11 Aligned_cols=85 Identities=20% Similarity=0.174 Sum_probs=65.9
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++-..+++.||.. +.+...... ..+.|+||.||+.++.++|++||.+.
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~~----~~g~tpL~~A~~~~~~~~v~~Ll~~g----------------- 215 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDA----GADLNKPEP----TCGRTPLHLAVEAQAASVLELLLKAG----------------- 215 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHH----TCCTTCCCT----TTCCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCCCC----CCCcCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 57788888889999998873 222111111 12679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++.....|.||||+|+.. +..+|+..|-
T Consensus 216 -------ad~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll 245 (282)
T 1oy3_D 216 -------ADPTARMYGGRTPLGSALLR-PNPILARLLR 245 (282)
T ss_dssp -------CCTTCCCTTSCCHHHHHHTS-SCHHHHHHHH
T ss_pred -------CCCcccccCCCCHHHHHHHc-CCcHHHHHHH
Confidence 34567788999999999987 7899999993
No 27
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=97.95 E-value=7.4e-06 Score=79.48 Aligned_cols=84 Identities=18% Similarity=0.158 Sum_probs=44.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++...+++.||.. +.+.... .-.+.|+||+|+..++.++|++||.+.
T Consensus 76 ~L~~A~~~g~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~~----------------- 129 (222)
T 3ehr_A 76 PLHEAAKRGNLSWLRECLDN----RVGVNGL-----DKAGSTALYWACHGGHKDIVEMLFTQP----------------- 129 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHTTCHHHHHHHTTST-----------------
T ss_pred ccccccccCcHHHHHHHHhC----CCCcccc-----CCCCCCHHHHHHHcCCHHHHHHHHcCC-----------------
Confidence 45556666666666666651 1111110 013557777777777777777777541
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
..+++..+..|.||||+||.. |..+|+..|
T Consensus 130 ------g~~~~~~d~~g~tpL~~A~~~-~~~~~v~~L 159 (222)
T 3ehr_A 130 ------NIELNQQNKLGDTALHAAAWK-GYADIVQLL 159 (222)
T ss_dssp ------TCCCCCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred ------CCCccccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 112334445555666665554 455555555
No 28
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=97.94 E-value=1e-05 Score=80.91 Aligned_cols=85 Identities=24% Similarity=0.116 Sum_probs=60.8
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~ 796 (851)
...|-+|+..+-..+++.||. ...++.- . -.+.|+||+|+..++.+||++||.+.
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~--d-----~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------- 100 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE---DRDVDAV--D-----ENGRTALLFVAGLGSDKCVRLLAEAG--------------- 100 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT---TCCTTCB--C-----TTSCBHHHHHHHHTCHHHHHHHHHTT---------------
T ss_pred CCHHHHHHHcCCHHHHHHHHc---CCCCCCc--C-----CCCCCHHHHHHHCCCHHHHHHHHHcC---------------
Confidence 456778888888888888887 1112211 1 13679999999999999999999763
Q ss_pred ccCcccccccCCCCCC-CCCCchhhhhcccCCchhHHHhhh
Q 003063 797 VDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 797 v~~~~~~y~F~pd~~G-p~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-+++... ..|+||||+||.. |..++++.|-
T Consensus 101 ---------a~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll 131 (244)
T 3ui2_A 101 ---------ADLDHRDMRGGLTALHMAAGY-VRPEVVEALV 131 (244)
T ss_dssp ---------CCTTCCCSSSCCCHHHHHHHT-TCHHHHHHHH
T ss_pred ---------CCCCcCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 2234444 6689999998876 7888888883
No 29
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=97.94 E-value=7.8e-06 Score=74.82 Aligned_cols=53 Identities=25% Similarity=0.382 Sum_probs=45.6
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+.|+||+|++.++.+||++|+.+. .+++..+..|.||||+|+.. |..+|++.|
T Consensus 100 g~t~L~~A~~~~~~~~v~~Ll~~g------------------------a~~~~~~~~g~t~l~~A~~~-~~~~i~~~L 152 (153)
T 1awc_B 100 KMTALHWATEHNHQEVVELLIKYG------------------------ADVHTQSKFCKTAFDISIDN-GNEDLAEIL 152 (153)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT------------------------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC------------------------CCccccCCCCCCHHHHHHHc-CCHHHHHHh
Confidence 469999999999999999999773 23566788999999999987 889999877
No 30
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=97.92 E-value=1.3e-05 Score=81.62 Aligned_cols=55 Identities=22% Similarity=0.190 Sum_probs=41.9
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+.|+||+|++.+..+||++||.+. .+++..+..|.||||+||.. |..+++..|-+
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~g------------------------ad~n~~d~~G~TpLh~A~~~-g~~~iv~~Ll~ 237 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACE------------------------ADVNVQDDDGSTALMCACEH-GHKEIAGLLLA 237 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT------------------------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCC------------------------CCCCCCCCCCCCHHHHHHHC-CCHHHHHHHHh
Confidence 569999999999999999999773 23455566777777777766 66777777743
No 31
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=97.91 E-value=1.3e-05 Score=75.18 Aligned_cols=54 Identities=20% Similarity=0.232 Sum_probs=37.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
.|-+|+..+...+++.||.. +.+..... -.+.++||.|++.++.+||++||.+.
T Consensus 42 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (179)
T 3f6q_A 42 PLHWACREGRSAVVEMLIMR----GARINVMN-----RGDDTPLHLAASHGHRDIVQKLLQYK 95 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCCC-----TTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHHc----CCCCCCcC-----CCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 67788888888888888863 22211111 13568888888888888888888763
No 32
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=97.91 E-value=1.3e-05 Score=74.02 Aligned_cols=83 Identities=20% Similarity=0.121 Sum_probs=51.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.||.. +.+.... --.+.++||.|++.++.+||++|+.+.
T Consensus 39 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 92 (167)
T 3v31_A 39 PLMWAAAHGQIAVVEFLLQN----GADPQLL-----GKGRESALSLACSKGYTDIVKMLLDCG----------------- 92 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTCCCHHHHHHHHTCHHHHHHHHHHT-----------------
T ss_pred HHHHHHHCCCHHHHHHHHHc----CCCCCCc-----CCCCCcHHHHHHHcCCHHHHHHHHHCC-----------------
Confidence 57788888888888888873 1111111 113558888888888888888888653
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+|+.. |..++++.|
T Consensus 93 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 121 (167)
T 3v31_A 93 -------VDVNEYDWNGGTPLLYAVHG-NHVKCVKML 121 (167)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred -------CCCCcCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 12334445556666665554 455555555
No 33
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=97.91 E-value=1.5e-05 Score=72.57 Aligned_cols=82 Identities=22% Similarity=0.241 Sum_probs=52.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+ +..+...+++.||.. +.+..... -.+.++||+|++.++.++|++|+.+.
T Consensus 39 ~L~~-~~~~~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 91 (156)
T 1bd8_A 39 ALQV-MMFGSTAIALELLKQ----GASPNVQD-----TSGTSPVHDAARTGFLDTLKVLVEHG----------------- 91 (156)
T ss_dssp HHHH-SCTTCHHHHHHHHHT----TCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHH-HHcCCHHHHHHHHHC----CCCCCCcC-----CCCCCHHHHHHHcCcHHHHHHHHHcC-----------------
Confidence 4455 667777788887763 22211111 13668899999999999999888763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+||.. |..++++.|
T Consensus 92 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 120 (156)
T 1bd8_A 92 -------ADVNVPDGTGALPIHLAVQE-GHTAVVSFL 120 (156)
T ss_dssp -------CCSCCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred -------CCCCCcCCCCCcHHHHHHHh-ChHHHHHHH
Confidence 22344455666777766665 566666666
No 34
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=97.90 E-value=1.7e-05 Score=73.58 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=25.0
Q ss_pred cCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 806 FRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 806 F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+|+.. +..+|++.|
T Consensus 126 a~~~~~~~~g~t~l~~A~~~-~~~~~~~~L 154 (172)
T 3v30_A 126 ADLTTEADSGYTPMDLAVAL-GYRKVQQVI 154 (172)
T ss_dssp CCTTCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred CCccccCCCCCCHHHHHHHh-CcHHHHHHH
Confidence 34667788999999999998 799999988
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=97.90 E-value=1.5e-05 Score=72.88 Aligned_cols=82 Identities=21% Similarity=0.250 Sum_probs=50.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+. +-..+++.||.. +.+.... -..+.++||.|++.+..++|++|+.+.
T Consensus 41 ~L~~A~~-~~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 93 (162)
T 1ihb_A 41 ALQVMKL-GNPEIARRLLLR----GANPDLK-----DRTGFAVIHDAARAGFLDTLQTLLEFQ----------------- 93 (162)
T ss_dssp HHHHCCS-SCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHc-CcHHHHHHHHHc----CCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 4556777 777888877763 2221111 113568888888888888888888653
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+|+.. |..++++.|
T Consensus 94 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 122 (162)
T 1ihb_A 94 -------ADVNIEDNEGNLPLHLAAKE-GHLRVVEFL 122 (162)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred -------CCCCCcCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 12344455666666666655 566666666
No 36
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=97.90 E-value=2.2e-05 Score=77.33 Aligned_cols=87 Identities=17% Similarity=0.087 Sum_probs=67.1
Q ss_pred HHHHhccCchHHHHHHHHHHHHhcc-ccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGT-VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~-v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
.|-+|+..+-..+++.||..-.... +..- --.+.|+||+||+.++.+||++||.+.
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~g---------------- 68 (282)
T 1oy3_D 12 ALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ-------NDLGQTALHLAAILGEASTVEKLYAAG---------------- 68 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSGGGGCC-------CTTSCCHHHHHHHHTCHHHHHHHHHTT----------------
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccccc-------CCCCCCHHHHHHHcCCHHHHHHHHHcC----------------
Confidence 6788999999999999997533211 1111 113679999999999999999999763
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++..+..|.||||+|+.. |..+++..|-+
T Consensus 69 --------a~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~ 99 (282)
T 1oy3_D 69 --------AGVLVAERGGHTALHLACRV-RAHTCACVLLQ 99 (282)
T ss_dssp --------CCSSCCCTTSCCHHHHHTTT-TCHHHHHHHSS
T ss_pred --------CCCCCCCCCCCCHHHHHHHc-CCcchhHhhhc
Confidence 34566678899999999987 89999999943
No 37
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=97.90 E-value=1.1e-05 Score=75.80 Aligned_cols=54 Identities=19% Similarity=0.134 Sum_probs=39.1
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
|-.|+..+-..+++.||.. +..+.... .-.+.++||.|++.++.++|++|+...
T Consensus 9 l~~A~~~g~~~~v~~ll~~---~~~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g 62 (179)
T 3f6q_A 9 IFTQCREGNAVAVRLWLDN---TENDLNQG-----DDHGFSPLHWACREGRSAVVEMLIMRG 62 (179)
T ss_dssp HHHHHHHTCHHHHHHHHHC---TTSCTTCC-----CTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHhc---Cccccccc-----CCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 4567888888899988872 12211111 124679999999999999999999864
No 38
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=97.88 E-value=1.1e-05 Score=82.47 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=27.9
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.+.+++..+...+++.||.. +.+.... ...+.||||+||+.++.++|++||.+
T Consensus 122 ~l~~a~~~~~~~~~~~Ll~~----g~~~n~~-----d~~g~TpL~~A~~~g~~~~v~~Ll~~ 174 (269)
T 4b93_B 122 PLHLACQQGHFQVVKCLLDS----NAKPNKK-----DLSGNTPLIYACSGGHHELVALLLQH 174 (269)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSCCC-----CTTCCCHHHHHHHTTCGGGHHHHHHT
T ss_pred ccccccccChHHHHHHHHHC----CCCCCCC-----CCCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 34556666666777766652 2221110 01245666666666666666666654
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=97.87 E-value=1.8e-05 Score=73.72 Aligned_cols=83 Identities=19% Similarity=0.221 Sum_probs=56.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.||.. +.+..... -.+.++||+|+..++.+||++|+.+..
T Consensus 50 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------------- 104 (169)
T 2y1l_E 50 PLHLAAFNGHLEIVEVLLKN----GADVNAVD-----HAGMTPLRLAALFGHLEIVEVLLKNGA---------------- 104 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTTC----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCccC-----CCCCCHHHHHHHcCCHHHHHHHHHcCC----------------
Confidence 67788888999999888873 22211111 135689999999999999999987631
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+++..+..|.||||+|+.. +..+++..|
T Consensus 105 --------~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 132 (169)
T 2y1l_E 105 --------DVNANDMEGHTPLHLAAMF-GHLEIVEVL 132 (169)
T ss_dssp --------CTTCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred --------CCCCCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 2334455667777777665 566676666
No 40
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=97.87 E-value=1.2e-05 Score=76.04 Aligned_cols=84 Identities=15% Similarity=0.044 Sum_probs=64.9
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.||..-.+ +..- -..+.++||+|++.+..++|++|+.+.
T Consensus 38 ~L~~A~~~g~~~~v~~Ll~~~~~--~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 91 (192)
T 2rfm_A 38 PLMVACMLGMENAIDKLVENFDK--LEDK-------DIEGSTALIWAVKNNRLGIAEKLLSKG----------------- 91 (192)
T ss_dssp HHHHHHHHTCGGGHHHHHHHHCC--TTCC-------CTTSCCHHHHHHHTTCHHHHHHHHHHT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHhccc--cccc-------cccCccHHHHHHHcCCHHHHHHHHHCC-----------------
Confidence 56778888888899998884321 1111 113679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. +..+++..|-
T Consensus 92 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 121 (192)
T 2rfm_A 92 -------SNVNTKDFSGKTPLMWSIIF-GYSEMSYFLL 121 (192)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred -------CCCCCCCCCCCcHHHHHHHc-CCHHHHHHHH
Confidence 23456678899999999987 7899999884
No 41
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=97.86 E-value=1.7e-05 Score=73.28 Aligned_cols=84 Identities=21% Similarity=0.258 Sum_probs=65.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++...+++.||.. +.+.... --.+.++||+|++.++.+||++|+.+.
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 125 (167)
T 3v31_A 72 ALSLACSKGYTDIVKMLLDC----GVDVNEY-----DWNGGTPLLYAVHGNHVKCVKMLLESG----------------- 125 (167)
T ss_dssp HHHHHHHHTCHHHHHHHHHH----TCCTTCC-----CTTSCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCcC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 57788888889999988874 2221111 123679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. |..++++.|.
T Consensus 126 -------~~~~~~~~~g~t~l~~A~~~-~~~~~~~~L~ 155 (167)
T 3v31_A 126 -------ADPTIETDSGYNSMDLAVAL-GYRSVQQVIE 155 (167)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred -------CCCCCcCCCCCCHHHHHHHc-CcHHHHHHHH
Confidence 34566788999999999988 7899999883
No 42
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=97.86 E-value=1.5e-05 Score=82.18 Aligned_cols=83 Identities=19% Similarity=0.205 Sum_probs=64.1
Q ss_pred HHHHhccC---chHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccc
Q 003063 719 LIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 719 LL~Fsver---dWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
.|-+|+.. +...+++.||.. +.+.... --.+.||||+|+..++.++|++||.+.
T Consensus 172 ~Lh~A~~~~~~~~~~~v~~Ll~~----ga~in~~-----d~~g~TpLh~A~~~g~~~~v~~Ll~~g-------------- 228 (278)
T 1dcq_A 172 ALHLAVRSVDRTSLHIVDFLVQN----SGNLDKQ-----TGKGSTALHYCCLTDNAECLKLLLRGK-------------- 228 (278)
T ss_dssp HHHHHHHHCCTTTHHHHHHHHHH----CSCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTT--------------
T ss_pred cchHHHHhcccchHHHHHHHHHC----CCCcccc-----CCCCCCHHHHHHHcCCHHHHHHHHHcC--------------
Confidence 56677776 778888888874 2222111 114779999999999999999999763
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-++++.+..|.||||+|+.. |..+|++.|
T Consensus 229 ----------ad~~~~d~~g~tpL~~A~~~-~~~~~v~~L 257 (278)
T 1dcq_A 229 ----------ASIEIANESGETPLDIAKRL-KHEHCEELL 257 (278)
T ss_dssp ----------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred ----------CCCCCccCCCCCHHHHHHHc-CCHHHHHHH
Confidence 24567788999999999987 789999999
No 43
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=97.86 E-value=1.6e-05 Score=72.59 Aligned_cols=85 Identities=15% Similarity=0.167 Sum_probs=64.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++...+++.||.. +.+..... -.+.|+||+|++.+..++|++|+.+.+.
T Consensus 73 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------------- 128 (162)
T 1ihb_A 73 VIHDAARAGFLDTLQTLLEF----QADVNIED-----NEGNLPLHLAAKEGHLRVVEFLVKHTAS--------------- 128 (162)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHHSCC---------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCcC-----CCCCCHHHHHHHcCCHHHHHHHHHccCC---------------
Confidence 57788888888999888862 22222111 1467999999999999999999987422
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
..+.....|.||||+|+.. |..++++.|-
T Consensus 129 --------~~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll 157 (162)
T 1ihb_A 129 --------NVGHRNHKGDTACDLARLY-GRNEVVSLMQ 157 (162)
T ss_dssp --------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred --------CCCCcCCCCCcHHHHHHHc-CCHHHHHHHH
Confidence 1245677899999999987 7899999884
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=97.84 E-value=1.6e-05 Score=77.52 Aligned_cols=85 Identities=20% Similarity=0.289 Sum_probs=65.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++-..+++.||.. +.+...... ..+.|+||+|++.++.+||++||.+.
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~----~~g~tpL~~A~~~~~~~~v~~Ll~~g----------------- 174 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSL----GADVNAQEP----CNGRTALHLAVDLQNPDLVSLLLKCG----------------- 174 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHH----TCCTTCCCT----TTCCCHHHHHHHTTCHHHHHHHHTTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCCCC----CCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 67788888989999988873 222111111 14679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++.....|.||||+|+.. +..+|+..|-
T Consensus 175 -------a~~~~~~~~g~tpl~~A~~~-~~~~~~~~Ll 204 (236)
T 1ikn_D 175 -------ADVNRVTYQGYSPYQLTWGR-PSTRIQQQLG 204 (236)
T ss_dssp -------CCSCCCCTTCCCGGGGCTTS-SCHHHHHHHH
T ss_pred -------CCCCcccCCCCCHHHHHHcc-CchHHHHHHH
Confidence 34567788999999999987 7999999983
No 45
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=97.84 E-value=1.3e-05 Score=72.08 Aligned_cols=85 Identities=19% Similarity=0.249 Sum_probs=63.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++-..+++.||.. +.+.... -..+.|+||+|++.++.+||++|+.+.
T Consensus 46 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 99 (137)
T 3c5r_A 46 PLHEACNHGHLKVVELLLQH----KALVNTT-----GYQNDSPLHDAAKNGHVDIVKLLLSYG----------------- 99 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CGGGCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCcccCc-----CCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 57788888988998888862 2221111 124679999999999999999999773
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.++++.+..|.||||+|+.. +..+++..|.+
T Consensus 100 -------a~~~~~~~~g~tpl~~A~~~-~~~~~l~~l~~ 130 (137)
T 3c5r_A 100 -------ASRNAVNIFGLRPVDYTDDE-SMKSLLLLPEK 130 (137)
T ss_dssp -------CCTTCCCTTSCCGGGGCCCH-HHHHHHSCC--
T ss_pred -------CCCCCCCCCCCCHHHHHhhc-cHHHHHhhccc
Confidence 34567788999999999866 67888877744
No 46
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=97.84 E-value=2.1e-05 Score=68.04 Aligned_cols=84 Identities=26% Similarity=0.300 Sum_probs=63.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.|+.. +.+..... -.+.++||.|++.+..+||++|+.+.
T Consensus 38 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~-----~~g~t~l~~A~~~~~~~~~~~Ll~~g----------------- 91 (126)
T 1n0r_A 38 PLHLAARNGHLEVVKLLLEA----GADVNAKD-----KNGRTPLHLAARNGHLEVVKLLLEAG----------------- 91 (126)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCCC-----TTSCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCcHHHHHHHHHc----CCCCcccC-----CCCCcHHHHHHHcChHHHHHHHHHcC-----------------
Confidence 57778888888888888762 22211111 13679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. +..++++.|-
T Consensus 92 -------~~~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll 121 (126)
T 1n0r_A 92 -------ADVNAKDKNGRTPLHLAARN-GHLEVVKLLL 121 (126)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred -------CCCcccCCCCCCHHHHHHHc-CcHHHHHHHH
Confidence 23456678899999999987 7899998874
No 47
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=97.83 E-value=1.1e-05 Score=77.94 Aligned_cols=87 Identities=20% Similarity=0.246 Sum_probs=56.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|.+|+..+...+++.||.. +.+.... ...+.|+||.|++.+..+||++|+.+.
T Consensus 153 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 206 (241)
T 1k1a_A 153 PLIHAVENNSLSMVQLLLQH----GANVNAQ-----MYSGSSALHSASGRGLLPLVRTLVRSG----------------- 206 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCB-----CTTSCBHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCc-----CCCCCCHHHHHHHcCCHHHHHHHHhcC-----------------
Confidence 56677777777777777762 1221110 113568888888888888888888652
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcCc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDP 839 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~dP 839 (851)
.+++..+..|.||||+|+.. |..+|+..|.+.|
T Consensus 207 -------a~~~~~~~~g~tpl~~A~~~-~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 207 -------ADSSLKNCHNDTPLMVARSR-RVIDILRGKATRP 239 (241)
T ss_dssp -------CCTTCCCTTSCCTTTTCSSH-HHHHHHTC-----
T ss_pred -------CCCCCcCCCCCCHHHHHHhc-CcHHHHhhhccCC
Confidence 23556677888999998877 7888888886665
No 48
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=97.83 E-value=2.1e-05 Score=75.39 Aligned_cols=85 Identities=22% Similarity=0.248 Sum_probs=63.2
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.||.. +.+..... -.+.++||+|++.++.++|++|+.+.+
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------------- 164 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIEN----GASVRIKD-----KFNQIPLHRAASVGSLKLIELLCGLGK---------------- 164 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCSCCCC-----TTSCCHHHHHHHTTCHHHHHHHHTTTC----------------
T ss_pred HHHHHHHcCCHhHHHHHHHc----CCCccccC-----CCCCCHHHHHHHcCCHHHHHHHHhcCc----------------
Confidence 56788888888888888863 22221111 136799999999999999999997641
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. |..+++..|-
T Consensus 165 -------~~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll 194 (228)
T 2dzn_A 165 -------SAVNWQDKQGWTPLFHALAE-GHGDAAVLLV 194 (228)
T ss_dssp -------CCSCCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred -------ccccCcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 23456678899999999887 7888888885
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=97.83 E-value=2.1e-05 Score=77.57 Aligned_cols=104 Identities=23% Similarity=0.137 Sum_probs=66.2
Q ss_pred HHHHhccC---chHHHHHHHHHHHHhcc-ccCCCCchH-HHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccc
Q 003063 719 LIEFSMDH---EWCAVVKKLLHILLDGT-VSLGEHPSL-DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 793 (851)
Q Consensus 719 LL~Fsver---dWcAVvkkLL~~l~~g~-v~~g~~ss~-e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~ 793 (851)
.|-+|+.. +-..+++.||..-.+-. +..-..... +.-..+.|+||+|++.++.+||++||.+...-
T Consensus 46 ~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--------- 116 (256)
T 2etb_A 46 CLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV--------- 116 (256)
T ss_dssp HHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT---------
T ss_pred HHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC---------
Confidence 57777877 88899999998654422 110000000 00124779999999999999999999874220
Q ss_pred cccccCcccccccCCCCCCC---CCCchhhhhcccCCchhHHHhhhc
Q 003063 794 KALVDGVHKGFLFRPDVIGP---AGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 794 ~~~v~~~~~~y~F~pd~~Gp---~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+.....-.|.++. +. -|.||||+||.. |..++++.|-+
T Consensus 117 ----~~~~~~~~~~~~~-~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~ 157 (256)
T 2etb_A 117 ----HLRACGRFFQKHQ-GTCFYFGELPLSLAACT-KQWDVVTYLLE 157 (256)
T ss_dssp ----TCCCCSGGGSCCS-SSCCCSCSSHHHHHHHT-TCHHHHHHHHH
T ss_pred ----Ccccccccccccc-cccccCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 1001111122322 23 399999999987 89999999955
No 50
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=97.82 E-value=1.7e-05 Score=79.37 Aligned_cols=86 Identities=20% Similarity=0.178 Sum_probs=63.9
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~ 796 (851)
...|-+|+..+-..+++.||.. +.+..... ..+.|+||.|++.++.+||++||.+.
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------- 96 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLER----GADINYAN-----VDGLTALHQACIDDNVDMVKFLVENG--------------- 96 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH----CCCTTCBC-----TTCCBHHHHHHHTTCHHHHHHHHHTT---------------
T ss_pred ccHHHHHHHcCCHHHHHHHHHc----CCCCcccC-----CCCCCHHHHHHHcCCHHHHHHHHHCC---------------
Confidence 3478889999999999999863 22211111 13679999999999999999999763
Q ss_pred ccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 797 v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|+||||+||.. |..+|++.|-
T Consensus 97 ---------a~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll 126 (299)
T 1s70_B 97 ---------ANINQPDNEGWIPLHAAASC-GYLDIAEYLI 126 (299)
T ss_dssp ---------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred ---------CCCCCCCCCCCcHHHHHHHc-CCHHHHHHHH
Confidence 23455677888999988877 7888888883
No 51
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=97.82 E-value=1.4e-05 Score=77.88 Aligned_cols=90 Identities=20% Similarity=0.220 Sum_probs=65.1
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHH-HHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDL-ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~-~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
.|.+|+..+...+++.||..-..... ...+.. -..+.++||+|++.++.+||++||.+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---------------- 140 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHL----HSILKATNYNGHTCLHLASIHGYLGIVELLVSLG---------------- 140 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSS----SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT----------------
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhH----HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC----------------
Confidence 57788888999999988873221000 011110 123679999999999999999999763
Q ss_pred cCcccccccCCCCCCC-CCCchhhhhcccCCchhHHHhhhc
Q 003063 798 DGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp-~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++.... .|.||||+|+.. |..+++..|-+
T Consensus 141 --------~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~ 172 (236)
T 1ikn_D 141 --------ADVNAQEPCNGRTALHLAVDL-QNPDLVSLLLK 172 (236)
T ss_dssp --------CCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHT
T ss_pred --------CCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 23455555 899999999987 79999999943
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=97.82 E-value=1.9e-05 Score=77.85 Aligned_cols=95 Identities=18% Similarity=0.056 Sum_probs=65.3
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCch---HHH---HHhhhhHHHHHHHcCChhHHHHHHhcccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS---LDL---ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGS 791 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss---~e~---~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~ 791 (851)
..|-+|+.++...+++.||..=. .+..-.... ... ...+.|+||+|++.++.++|++||....
T Consensus 92 t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~--------- 160 (256)
T 2etb_A 92 SALHIAIEKRSLQCVKLLVENGA--DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH--------- 160 (256)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC--CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS---------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC--CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc---------
Confidence 36788999999999999887311 122111100 000 0017799999999999999999997310
Q ss_pred cccccccCcccccccCCCCCCCCCCchhhhhccc-CCchh-------HHHhh
Q 003063 792 ENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK-DGSED-------VLDAL 835 (851)
Q Consensus 792 ~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~-~gs~~-------vldaL 835 (851)
+..+++..+..|.||||+||.. .+..+ |++.|
T Consensus 161 ------------~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L 200 (256)
T 2etb_A 161 ------------QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGL 200 (256)
T ss_dssp ------------CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred ------------cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHH
Confidence 0234567788999999999984 46776 88888
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=97.81 E-value=1.5e-05 Score=78.61 Aligned_cols=94 Identities=14% Similarity=0.008 Sum_probs=63.9
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCch------H-HHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS------L-DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGS 791 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss------~-e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~ 791 (851)
.|-+|+.++...+++.||..= ..+....... . .....+.|+||+|++.++.+||++||....
T Consensus 96 ~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~--------- 164 (260)
T 3jxi_A 96 ALHIAIERRCKHYVELLVEKG--ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH--------- 164 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT--CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS---------
T ss_pred HHHHHHHcCCHHHHHHHHhCC--CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc---------
Confidence 678899999999999998821 1122111000 0 000247799999999999999999997310
Q ss_pred cccccccCcccccccCCCCCCCCCCchhhhhcccCCc--------hhHHHhh
Q 003063 792 ENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS--------EDVLDAL 835 (851)
Q Consensus 792 ~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs--------~~vldaL 835 (851)
+..+++..+..|.||||+||..... .+|++.|
T Consensus 165 ------------~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L 204 (260)
T 3jxi_A 165 ------------KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL 204 (260)
T ss_dssp ------------CCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH
T ss_pred ------------cCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 0244567788999999999975321 4777777
No 54
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=97.81 E-value=2e-05 Score=78.63 Aligned_cols=93 Identities=12% Similarity=0.035 Sum_probs=64.7
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCch--HHH-------HHhhhhHHHHHHHcCChhHHHHHHhccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS--LDL-------ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 788 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss--~e~-------~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~ 788 (851)
-.|-+|+..+...+++.||.. +.+...... ... ...+.|+||+|++.++.+||++||....
T Consensus 103 tpL~~A~~~g~~~~v~~Ll~~----ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~------ 172 (273)
T 2pnn_A 103 TALHIAIERRNMTLVTLLVEN----GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW------ 172 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS------
T ss_pred CHHHHHHHcCCHHHHHHHHHC----CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc------
Confidence 367889999999999999883 222111111 000 0136799999999999999999997310
Q ss_pred ccccccccccCcccccccCCCCCCCCCCchhhhhcccCCc--------hhHHHhh
Q 003063 789 LGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS--------EDVLDAL 835 (851)
Q Consensus 789 ~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs--------~~vldaL 835 (851)
+..+++..+..|.||||+||..... .+|++.|
T Consensus 173 ---------------~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~L 212 (273)
T 2pnn_A 173 ---------------QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEI 212 (273)
T ss_dssp ---------------CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred ---------------CCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHH
Confidence 0234567788999999999986331 5777777
No 55
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.79 E-value=2.2e-05 Score=76.82 Aligned_cols=55 Identities=25% Similarity=0.288 Sum_probs=34.9
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.+|.+|+..+-..+++.||.. +.+..... --.+.++||+|++.++.++|++|+.+
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~ 61 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEG----GANVNFQE----EEGGWTPLHNAVQMSREDIVELLLRH 61 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT----TCCTTCCC----TTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred hHHHHHHHcCCHHHHHHHHHc----CCCccccc----CCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 467788888888888888762 11111110 11245777777777777777777765
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=97.79 E-value=2.5e-05 Score=72.80 Aligned_cols=87 Identities=18% Similarity=0.186 Sum_probs=67.2
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~ 796 (851)
...|.+|+..+-..+++.||.. +.+.... -..+.++||+|++.++.+||++|+...
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------- 70 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMAN----GADVNAE-----DASGWTPLHLAAFNGHLEIVEVLLKNG--------------- 70 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHTTCHHHHHHHHHTT---------------
T ss_pred cchHHHHHHcCCHHHHHHHHHC----CCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC---------------
Confidence 4578899999999999999873 2221111 124679999999999999999999763
Q ss_pred ccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 797 v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++..+..|.||||+|+.. |..++++.|-+
T Consensus 71 ---------~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~ 101 (169)
T 2y1l_E 71 ---------ADVNAVDHAGMTPLRLAALF-GHLEIVEVLLK 101 (169)
T ss_dssp ---------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred ---------CCCCccCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 23456677899999999988 78999999843
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=97.79 E-value=2e-05 Score=80.14 Aligned_cols=86 Identities=19% Similarity=0.222 Sum_probs=67.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++-..+++.||.. +.+.... --.+.||||+|++.++.+||++||...
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~----gad~n~~-----d~~G~TpLh~A~~~g~~~iv~~Ll~~~----------------- 239 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLAC----EADVNVQ-----DDDGSTALMCACEHGHKEIAGLLLAVP----------------- 239 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHTST-----------------
T ss_pred HHHHHHHcCCHHHHHHHHhC----CCCCCCC-----CCCCCCHHHHHHHCCCHHHHHHHHhcC-----------------
Confidence 57788889999999998873 2222111 124779999999999999999999732
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
..++++.+..|.||||+|+.. |..+|++.|-+
T Consensus 240 ------gad~~~~d~~g~TpL~~A~~~-g~~~iv~~Ll~ 271 (276)
T 4hbd_A 240 ------SCDISLTDRDGSTALMVALDA-GQSEIASMLYS 271 (276)
T ss_dssp ------TCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHH
T ss_pred ------CCCCcCcCCCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 234567788999999999998 89999999854
No 58
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=97.78 E-value=2e-05 Score=71.09 Aligned_cols=24 Identities=21% Similarity=0.016 Sum_probs=21.1
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
+.++||+|++.+..++|++|+...
T Consensus 12 g~t~L~~A~~~~~~~~v~~Ll~~g 35 (136)
T 1d9s_A 12 SDAGLATAAARGQVETVRQLLEAG 35 (136)
T ss_dssp CSCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CccHHHHHHHcCCHHHHHHHHHcC
Confidence 568999999999999999999763
No 59
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=97.77 E-value=1.8e-05 Score=80.90 Aligned_cols=81 Identities=20% Similarity=0.192 Sum_probs=60.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.||.. +.+.... .-.+.|+||+||++++.+||++||.+.
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~----gadvn~~-----~~~g~t~Lh~A~~~g~~~~v~~Ll~~G----------------- 208 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQH----GASINAS-----NNKGNTALHEAVIEKHVFVVELLLLHG----------------- 208 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHT----TCCTTCB-----CTTSCBHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHCCCHHHHHHHHHC----CCCCCcc-----ccCCCcHHHHHHHcCCHHHHHHHHHCC-----------------
Confidence 46788999999999988862 2222111 124779999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+|++.+..|.||||+|+.. .+|++.|
T Consensus 209 -------ad~~~~d~~G~TpL~~A~~~---~~i~~lL 235 (269)
T 4b93_B 209 -------ASVQVLNKRQRTAVDCAEQN---SKIMELL 235 (269)
T ss_dssp -------CCSCCCCTTSCCSGGGSCTT---CHHHHHT
T ss_pred -------CCCCCcCCCCCCHHHHHHhC---CcHHHHH
Confidence 24677788999999999753 3466555
No 60
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=97.77 E-value=5.5e-05 Score=73.13 Aligned_cols=59 Identities=17% Similarity=0.010 Sum_probs=42.2
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
.|-+|+..+-..+++.||..-.+-.. ..... ....+.++||.|++.++.+||++|+.+.
T Consensus 40 ~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 98 (232)
T 2rfa_A 40 ALHIAALYDNLEAAMVLMEAAPELVF--EPMTS--ELYEGQTALHIAVINQNVNLVRALLARG 98 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGGGGG--CCCCS--TTTTTCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCchhcc--ccccc--cCCCCcCHHHHHHHcCCHHHHHHHHhCC
Confidence 67889999999999999984322100 00000 0124679999999999999999999875
No 61
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=97.76 E-value=2.6e-05 Score=78.06 Aligned_cols=54 Identities=28% Similarity=0.352 Sum_probs=45.9
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
+.++||+|++++..++|++|+.+. .+++..+..|.||||+||.. |..+++..|-
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g------------------------~d~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll 252 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQAR------------------------YDVNIKDYDGWTPLHAAAHW-GKEEACRILV 252 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTT------------------------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcC------------------------CCCCCcCCCCCcHHHHHHhc-CCHHHHHHHH
Confidence 569999999999999999999763 34566778899999999887 7889999883
No 62
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=97.76 E-value=3.8e-05 Score=74.23 Aligned_cols=91 Identities=20% Similarity=0.089 Sum_probs=64.5
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHH------HHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLD------LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGS 791 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e------~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~ 791 (851)
..|-+|+.++-..+++.||..-.+ +........- ....+.|+||+|+++++.++|++|+.+.
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---------- 144 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGAS--VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG---------- 144 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC--TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT----------
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCC--CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC----------
Confidence 367888999999999998874211 1111110000 0013679999999999999999999763
Q ss_pred cccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHH----Hhh
Q 003063 792 ENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL----DAL 835 (851)
Q Consensus 792 ~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vl----daL 835 (851)
.+++..+..|.||||+|+.. +..+++ +.|
T Consensus 145 --------------a~~~~~d~~g~t~L~~A~~~-~~~~~~~~i~~~L 177 (232)
T 2rfa_A 145 --------------ADIRAQDSLGNTVLHILILQ-PNKTFACQMYNLL 177 (232)
T ss_dssp --------------CCTTCCCTTSCCHHHHHHTC-SCHHHHHHHHHHH
T ss_pred --------------CCCCCCCCCCCCHHHHHHHc-CChHHHHHHHHHH
Confidence 34567788999999999988 566665 777
No 63
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=97.75 E-value=4e-05 Score=70.68 Aligned_cols=77 Identities=25% Similarity=0.166 Sum_probs=57.0
Q ss_pred CchHHHHHHHHHHHHhccccCCCCchHHHHHhhhh-HHHHHHHcCChhHHHHHHhcccccccccccccccccccCccccc
Q 003063 726 HEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELG-LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGF 804 (851)
Q Consensus 726 rdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~-LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y 804 (851)
.+-..+++.||.. +.+..... ..+.+ +||+|++++..+||++||.+.
T Consensus 54 ~~~~~~v~~Ll~~----g~~~~~~d-----~~g~ttpL~~A~~~~~~~~v~~Ll~~g----------------------- 101 (156)
T 1bi7_B 54 MGSARVAELLLLH----GAEPNCAD-----PATLTRPVHDAAREGFLDTLVVLHRAG----------------------- 101 (156)
T ss_dssp TTCHHHHHHHHTT----TCCCCCCC-----TTTCCCHHHHHHHHTCHHHHHHHHHHT-----------------------
T ss_pred cCCHHHHHHHHHc----CCCCCCcC-----CCCCcHHHHHHHHCCCHHHHHHHHHcC-----------------------
Confidence 5666777777652 22222111 13557 999999999999999999873
Q ss_pred ccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 805 LFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 805 ~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. |..++++.|-
T Consensus 102 -a~~~~~d~~g~tpl~~A~~~-~~~~~v~~Ll 131 (156)
T 1bi7_B 102 -ARLDVRDAWGRLPVDLAEEL-GHRDVARYLR 131 (156)
T ss_dssp -CCSSCCCTTCCCHHHHHHHH-TCHHHHHHHS
T ss_pred -CCCcccCCCCCCHHHHHHHh-CHHHHHHHHH
Confidence 23456678899999999988 7899999994
No 64
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=97.74 E-value=3.6e-05 Score=68.03 Aligned_cols=80 Identities=21% Similarity=0.234 Sum_probs=58.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+.... -..+.|+||+|++.+..+||++|+.+.
T Consensus 43 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----d~~g~tpL~~A~~~~~~~~v~~Ll~~g----------------- 96 (123)
T 3aaa_C 43 PLHYAADCGQLEILEFLLLK----GADINAP-----DKHHITPLLSAVYEGHVSCVKLLLSKG----------------- 96 (123)
T ss_dssp HHHHHHHTTCHHHHHHHHTT----TCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCcC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 67788888888888888752 2222111 124679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
-+++..+..|.||||+|+ ..++.+.|
T Consensus 97 -------a~~~~~~~~g~t~l~~A~----~~~~~~ll 122 (123)
T 3aaa_C 97 -------ADKTVKGPDGLTAFEATD----NQAIKALL 122 (123)
T ss_dssp -------CCTTCCCTTSCCHHHHCC----CHHHHHHH
T ss_pred -------CCCCCcCCCCCCHHHHhC----CHHHHHHh
Confidence 235677889999999994 34455443
No 65
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=97.74 E-value=3.2e-05 Score=78.90 Aligned_cols=51 Identities=20% Similarity=0.095 Sum_probs=35.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.|-+|+..+...+++.||..=.+ +... .+.|+||+|++.++.++|++|+.+
T Consensus 34 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~---------~g~t~L~~A~~~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 34 ASYYAIADNNVRLVCTLLNAGAL--KNLL---------ENEFPLHQAATLEDTKIVKILLFS 84 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTGG--GSCC---------TTCCHHHHHTTSSSCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCC--CCCC---------CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 67788888999999888873111 1111 256788888888888888888765
No 66
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=97.73 E-value=2.6e-05 Score=73.55 Aligned_cols=55 Identities=20% Similarity=0.126 Sum_probs=33.8
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
.|-+|+..+-..+++.||. .+..+.... ...+.++||+|++.++.++|++|+...
T Consensus 8 ~L~~A~~~g~~~~v~~ll~---~~~~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g 62 (201)
T 3hra_A 8 ALLEAANQRDTKKVKEILQ---DTTYQVDEV-----DTEGNTPLNIAVHNNDIEIAKALIDRG 62 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHT---CTTCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHhccHHHHHHHHH---cCCCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3555666666677777764 222221111 113568888888888888888888753
No 67
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=97.73 E-value=3.7e-05 Score=72.46 Aligned_cols=54 Identities=22% Similarity=0.248 Sum_probs=37.2
Q ss_pred hhhHHHHHHHcCC-----hhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHH
Q 003063 758 ELGLLHRAVRKNS-----RPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 832 (851)
Q Consensus 758 em~LLH~AVr~~s-----~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vl 832 (851)
+.|+||+|+..+. .++|++|+.+. .+++..+..|.||||+|+.. |..+|+
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g------------------------a~~~~~~~~g~t~l~~A~~~-~~~~~~ 194 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENG------------------------ADQSIKDNSGRTAMDYANQK-GYTEIS 194 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTT------------------------CCTTCCCTTSCCHHHHHHHH-TCHHHH
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCC------------------------CCCCccCCCCCCHHHHHHHc-CCHhHH
Confidence 4566666666666 66666666542 34566677788888888877 778888
Q ss_pred Hhhh
Q 003063 833 DALT 836 (851)
Q Consensus 833 daLt 836 (851)
+.|-
T Consensus 195 ~~Ll 198 (201)
T 3hra_A 195 KILA 198 (201)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7774
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=97.73 E-value=5.4e-05 Score=75.37 Aligned_cols=84 Identities=14% Similarity=0.073 Sum_probs=63.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.||.. +.+..... -.+.|+||+|+..+..+||++||.+.
T Consensus 57 pLh~A~~~g~~~~v~~Ll~~----ga~~n~~d-----~~g~tpLh~A~~~g~~~~v~~Ll~~g----------------- 110 (229)
T 2vge_A 57 ALHNAICGANYSIVDFLITA----GANVNSPD-----SHGWTPLHCAASCNDTVICMALVQHG----------------- 110 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCCC-----TTCCCHHHHHHHTTCHHHHHHHHTTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCCCC-----CCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 67788999999999988863 22221111 14779999999999999999999763
Q ss_pred CcccccccCCCCCC-CCCCchhhhh-cccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIG-PAGLTPIHIA-AGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~G-p~GlTPLHIA-A~~~gs~~vldaL 835 (851)
.+++... ..|.||||+| |...|..+|++.|
T Consensus 111 -------a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~L 142 (229)
T 2vge_A 111 -------AAIFATTLSDGATAFEKCDPYREGYADCATYL 142 (229)
T ss_dssp -------CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHH
T ss_pred -------CCcccccCCCCCCHHHHHHHHhcChHHHHHHH
Confidence 2234443 5899999999 3555899999999
No 69
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.72 E-value=4e-05 Score=73.27 Aligned_cols=62 Identities=18% Similarity=0.147 Sum_probs=45.8
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+.++||.|++.+..+||++|+.+. .+++..+..|.||||+|+.. +..+|+..|.+
T Consensus 177 g~t~L~~A~~~~~~~~v~~Ll~~g------------------------~~~~~~~~~g~t~l~~A~~~-~~~~~v~~L~~ 231 (240)
T 3eu9_A 177 KNTALHWAVLAGNTTVISLLLEAG------------------------ANVDAQNIKGESALDLAKQR-KNVWMINHLQE 231 (240)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHT------------------------CCTTCBCTTSCBHHHHHHHT-TCHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC------------------------CCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 347888888888888888888663 34566678899999999888 79999999966
Q ss_pred Cccccee
Q 003063 838 DPGMVIS 844 (851)
Q Consensus 838 dP~~vgl 844 (851)
.....|+
T Consensus 232 ~~~~~~~ 238 (240)
T 3eu9_A 232 ARQAKGY 238 (240)
T ss_dssp HC-----
T ss_pred hhhccCc
Confidence 5555443
No 70
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=97.71 E-value=2.9e-05 Score=80.74 Aligned_cols=88 Identities=9% Similarity=0.052 Sum_probs=66.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHh-ccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLD-GTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~-g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
.|.+|+..+-..+++.||..-.+ ..++.... .-.+.|+||+|++.++.+||++||.+.
T Consensus 176 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-----~~~g~t~L~~A~~~g~~~~v~~Ll~~g---------------- 234 (364)
T 3ljn_A 176 PLMRAMEFRNREALDLMMDTVPSKSSLRLDYA-----NKQGNSHLHWAILINWEDVAMRFVEMG---------------- 234 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCC-----CTTCCCTTHHHHTTTCHHHHHHHHTTT----------------
T ss_pred HHHHHHHcCCHHHHHHHHhccccccccccccc-----CCCCCcHHHHHHHcCCHHHHHHHHHcC----------------
Confidence 67788888999999998885332 11111100 123669999999999999999999763
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.++++.+..|.||||+|+.. |..+|+..|-
T Consensus 235 --------ad~~~~d~~g~tpL~~A~~~-g~~~~v~~Ll 264 (364)
T 3ljn_A 235 --------IDVNMEDNEHTVPLYLSVRA-AMVLLTKELL 264 (364)
T ss_dssp --------CCTTCCCTTSCCHHHHHHHT-CCHHHHHHHH
T ss_pred --------CCCCCCCCCCCCHHHHHHHh-ChHHHHHHHH
Confidence 34567788999999999988 8999999993
No 71
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=97.70 E-value=4.2e-05 Score=73.72 Aligned_cols=83 Identities=18% Similarity=0.271 Sum_probs=54.9
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|.+|+.++...+++.||.. +.+.... ...+.++||.|++.++.+||++|+.+.
T Consensus 109 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g----------------- 162 (231)
T 3aji_A 109 PLHYAASKNRHEIAVMLLEG----GANPDAK-----DHYDATAMHRAAAKGNLKMVHILLFYK----------------- 162 (231)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCc-----CCCCCcHHHHHHHcCCHHHHHHHHhcC-----------------
Confidence 56677777777777777652 1111100 113568888888888888888888653
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+|+.. +..++++.|
T Consensus 163 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 191 (231)
T 3aji_A 163 -------ASTNIQDTEGNTPLHLACDE-ERVEEAKFL 191 (231)
T ss_dssp -------CCSCCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred -------CCccccCCCCCCHHHHHHHC-CCHHHHHHH
Confidence 23455566788888888766 677777777
No 72
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=97.70 E-value=2.9e-05 Score=67.70 Aligned_cols=55 Identities=25% Similarity=0.298 Sum_probs=46.4
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+.++||+||+.+..++|++|+... ..++..+..|.||||+|+.. +..+++..|-+
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll~~g------------------------~~~~~~d~~g~t~L~~A~~~-~~~~~~~~Ll~ 63 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLLSKG------------------------ADVNARSKDGNTPLHLAAKN-GHAEIVKLLLA 63 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHTTTT------------------------CCSSCCCSSSCCTTHHHHTT-TCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC------------------------CCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 569999999999999999999653 23456678899999999987 78999999843
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=97.69 E-value=4.2e-05 Score=69.59 Aligned_cols=87 Identities=22% Similarity=0.112 Sum_probs=66.1
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~ 796 (851)
.-.|-+|+..+-..+++.||.. ....++.- . -.+.++||+ +..++.+||++|+.+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~--~-----~~g~t~L~~-~~~~~~~~v~~Ll~~g--------------- 58 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-ELVHPDAL--N-----RFGKTALQV-MMFGSTAIALELLKQG--------------- 58 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCCTTCC--C-----TTSCCHHHH-SCTTCHHHHHHHHHTT---------------
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hCcCcccc--C-----CCCCcHHHH-HHcCCHHHHHHHHHCC---------------
Confidence 3467788999999999999985 21112211 1 136799999 9999999999999763
Q ss_pred ccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 797 v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++..+..|.||||+||.. |..++++.|-+
T Consensus 59 ---------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~ 89 (156)
T 1bd8_A 59 ---------ASPNVQDTSGTSPVHDAART-GFLDTLKVLVE 89 (156)
T ss_dssp ---------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred ---------CCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 33566678899999999988 89999999843
No 74
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=97.69 E-value=5.8e-05 Score=78.48 Aligned_cols=91 Identities=21% Similarity=0.242 Sum_probs=68.9
Q ss_pred HHHHHhccCc--hHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccc
Q 003063 718 WLIEFSMDHE--WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 718 ~LL~Fsverd--WcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
..|.+|+..+ ...+++.||.. +.+.... ...+.|+||.|++.++.++|++||.+.+..
T Consensus 140 t~L~~A~~~g~~~~~~v~~Ll~~----ga~~~~~-----d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~----------- 199 (364)
T 3ljn_A 140 TALHWCVGLGPEYLEMIKILVQL----GASPTAK-----DKADETPLMRAMEFRNREALDLMMDTVPSK----------- 199 (364)
T ss_dssp CHHHHHHHSCGGGHHHHHHHHHH----TCCTTCC-----CTTSCCHHHHHHHTTCHHHHHHHHHHCSCS-----------
T ss_pred CHHHHHHHcCCchHHHHHHHHHc----CCCCccc-----CCCCCCHHHHHHHcCCHHHHHHHHhccccc-----------
Confidence 3677888888 89999999985 1221111 124679999999999999999999875321
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
...+++..+..|.||||+||.. |..+|+..|-+
T Consensus 200 --------~~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~ 232 (364)
T 3ljn_A 200 --------SSLRLDYANKQGNSHLHWAILI-NWEDVAMRFVE 232 (364)
T ss_dssp --------SSCCTTCCCTTCCCTTHHHHTT-TCHHHHHHHHT
T ss_pred --------ccccccccCCCCCcHHHHHHHc-CCHHHHHHHHH
Confidence 1234567788999999999987 89999999944
No 75
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=97.69 E-value=3.2e-05 Score=74.13 Aligned_cols=86 Identities=22% Similarity=0.176 Sum_probs=62.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+...+++.||..-.. .+.... --.+.++||.|++.+..++|++|+.+.
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~-----~~~g~t~L~~A~~~~~~~~~~~Ll~~g----------------- 130 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLK--PDLNKI-----TNQGVTCLHLAVGKKWFEVSQFLIENG----------------- 130 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSC--CCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHhCCCC--cccccC-----CcCCCCHHHHHHHcCCHhHHHHHHHcC-----------------
Confidence 56777888888888777652100 111110 113679999999999999999999762
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+||.. |..++++.|-
T Consensus 131 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 160 (228)
T 2dzn_A 131 -------ASVRIKDKFNQIPLHRAASV-GSLKLIELLC 160 (228)
T ss_dssp -------CCSCCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred -------CCccccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 34566788899999999987 7899999994
No 76
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=97.67 E-value=4.3e-05 Score=73.22 Aligned_cols=53 Identities=13% Similarity=0.074 Sum_probs=33.1
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.|.+|+..+...+++.||.. +.+.... ...+.++||.|++.+..++|++|+.+
T Consensus 95 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 95 PLILAARLAVEGMLEDLINS----HADVNAV-----DDLGKSALHWAAAVNNVDAAVVLLKN 147 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCB-----CTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHhCcHHHHHHHHHc----CCCCcCc-----CCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 56677777777788777762 1111110 01255777777777777777777765
No 77
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=97.67 E-value=5.6e-05 Score=75.40 Aligned_cols=102 Identities=18% Similarity=0.109 Sum_probs=64.1
Q ss_pred HHHHhccC---chHHHHHHHHHHHHhcc-----ccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccc
Q 003063 719 LIEFSMDH---EWCAVVKKLLHILLDGT-----VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLG 790 (851)
Q Consensus 719 LL~Fsver---dWcAVvkkLL~~l~~g~-----v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~ 790 (851)
.|-+|+.. +-..+++.||..-.+-. +...... .-..+.|+||+||+.++.+||++||.+...-
T Consensus 57 pL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~---~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~------ 127 (273)
T 2pnn_A 57 CLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTD---SYYKGQTALHIAIERRNMTLVTLLVENGADV------ 127 (273)
T ss_dssp HHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCS---TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT------
T ss_pred HHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhccccc---ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc------
Confidence 55666654 77888898888643311 1111000 0124679999999999999999999874221
Q ss_pred ccccccccCcccccccCC---CCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 791 SENKALVDGVHKGFLFRP---DVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 791 ~~~~~~v~~~~~~y~F~p---d~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
+.....-.|.. ......|.||||+||.. |..+|+..|-+
T Consensus 128 -------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~ 169 (273)
T 2pnn_A 128 -------QAAANGDFFKKTKGRPGFYFGELPLSLAACT-NQLAIVKFLLQ 169 (273)
T ss_dssp -------TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT-TCHHHHHHHHH
T ss_pred -------CccccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 00000001111 12234799999999998 79999999955
No 78
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=97.66 E-value=5.1e-05 Score=73.38 Aligned_cols=83 Identities=20% Similarity=0.206 Sum_probs=54.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|.+|+..+-..+++.||.. +.+.... --.+.++||.|+++++.+||++|+.+.
T Consensus 114 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~~~~Ll~~g----------------- 167 (237)
T 3b7b_A 114 PMIWATEYKHVDLVKLLLSK----GSDINIR-----DNEENICLHWAAFSGCVDIAEILLAAK----------------- 167 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHHCCHHHHHHHHTTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCcc-----CCCCCCHHHHHHHCCCHHHHHHHHHcC-----------------
Confidence 46667777777777777762 1111100 013558888888888888888888653
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+|+.. +..+++..|
T Consensus 168 -------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 196 (237)
T 3b7b_A 168 -------CDLHAVNIHGDSPLHIAARE-NRYDCVVLF 196 (237)
T ss_dssp -------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHH
T ss_pred -------CCCCCcCCCCCCHHHHHHHh-CCHhHHHHH
Confidence 23455566778888888776 677777777
No 79
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=97.66 E-value=4.2e-05 Score=67.14 Aligned_cols=55 Identities=25% Similarity=0.233 Sum_probs=46.6
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+-++||+||+.+..++|++|+... .+++..+..|.||||+||.. |..++++.|-
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g------------------------~~i~~~d~~g~tpLh~A~~~-~~~~~v~~Ll 77 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANG------------------------ADVAAKDKNGSTPLHLAARN-GHLEVVKLLL 77 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTT------------------------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcC------------------------CCCCccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 4569999999999999999999663 23456678999999999987 7999999883
No 80
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=97.64 E-value=5.9e-05 Score=76.30 Aligned_cols=86 Identities=21% Similarity=0.202 Sum_probs=66.7
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
-.|-+|+..+-..+++.||.. +.+.... -..+.|+||+|++.++.+||++|+.+.
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~g~~~iv~~Ll~~g---------------- 114 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQH----GADVHAK-----DKGGLVPLHNACSYGHYEVTELLLKHG---------------- 114 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTT----------------
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCcc-----CCCCCcHHHHHHHCCCHHHHHHHHHCC----------------
Confidence 378899999999999999873 2221111 124679999999999999999999763
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
.+++..+..|.||||+|+.. |..++++.|-+
T Consensus 115 --------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~ 145 (351)
T 3utm_A 115 --------ACVNAMDLWQFTPLHEAASK-NRVEVCSLLLS 145 (351)
T ss_dssp --------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHH
T ss_pred --------CCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 23456677899999999987 89999999943
No 81
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=97.62 E-value=5.8e-05 Score=76.31 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=60.3
Q ss_pred HHHHhccC---chHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccc
Q 003063 719 LIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 719 LL~Fsver---dWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
.|.+|+.. +...+++.||. .+.+..... -.+.|+||+|++++..+||++|+.+.
T Consensus 214 ~L~~A~~~~~~~~~~~~~~Ll~----~g~~~~~~~-----~~g~t~L~~A~~~g~~~~v~~Ll~~g-------------- 270 (351)
T 3utm_A 214 ALHCAVASLHPKRKQVAELLLR----KGANVNEKN-----KDFMTPLHVAAERAHNDVMEVLHKHG-------------- 270 (351)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHH----TTCCTTCCC-----TTCCCHHHHHHHTTCHHHHHHHHHTT--------------
T ss_pred HHHHHHHHhCccHHHHHHHHHH----cCCCcCCcC-----CCCCCHHHHHHHcCCHHHHHHHHHCC--------------
Confidence 45566655 55667766665 222222111 13679999999999999999999763
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+++..+..|.||||+|+.. |..++++.|-
T Consensus 271 ----------a~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll 300 (351)
T 3utm_A 271 ----------AKMNALDSLGQTALHRAALA-GHLQTCRLLL 300 (351)
T ss_dssp ----------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred ----------CCCCCcCCCCCCHHHHHHHc-CcHHHHHHHH
Confidence 34566788899999999987 7899999983
No 82
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=97.62 E-value=4.3e-05 Score=78.57 Aligned_cols=56 Identities=29% Similarity=0.331 Sum_probs=45.7
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCC-CCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~G-p~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+-++||.||+++..+||++||..- -+++... -.|+||||+||.. |..+|++.|
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~G------------------------advn~~~~~~g~TpLh~A~~~-g~~~iv~~L 78 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGG------------------------ANVNFQEEEGGWTPLHNAVQM-SREDIVELL 78 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHT------------------------CCTTCCCTTTCCCHHHHHHHT-TCHHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCC------------------------CCCCccCCCCCcCHHHHHHHc-CCHHHHHHH
Confidence 4669999999999999999999763 2344444 4699999999987 899999999
Q ss_pred hc
Q 003063 836 TD 837 (851)
Q Consensus 836 t~ 837 (851)
-+
T Consensus 79 l~ 80 (337)
T 4g8k_A 79 LR 80 (337)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 83
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=97.62 E-value=3.2e-05 Score=76.70 Aligned_cols=53 Identities=13% Similarity=0.072 Sum_probs=30.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.|-+|+..+-..+++.||.. +.+..... -.+.|+||+|++.+..++|++||.+
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~d-----~~g~t~L~~A~~~~~~~~v~~Ll~~ 179 (253)
T 1yyh_A 127 PLILAARLAVEGMLEDLINS----HADVNAVD-----DLGKSALHWAAAVNNVDAAVVLLKN 179 (253)
T ss_dssp HHHHHHHHTCSSHHHHHHHT----TCCTTCBC-----TTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcChHHHHHHHHHc----CCCCCCcC-----CCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45566666666666666652 11111100 1255777777777777777777765
No 84
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.61 E-value=6.6e-05 Score=78.30 Aligned_cols=84 Identities=20% Similarity=0.177 Sum_probs=62.9
Q ss_pred HHHHhccC---chHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccc
Q 003063 719 LIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 719 LL~Fsver---dWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
.|-+|+.. +-..+++.||.. +.+.... ...+.|+||.|+..+..+||++||.+.
T Consensus 193 ~Lh~A~~~~~~~~~~iv~~Ll~~----gadvn~~-----d~~G~TpLh~A~~~g~~~~v~~Ll~~g-------------- 249 (301)
T 2b0o_E 193 VLHLAVKVANQASLPLVDFIIQN----GGHLDAK-----AADGNTALHYAALYNQPDCLKLLLKGR-------------- 249 (301)
T ss_dssp HHHHHHHTCCTTTHHHHHHHHHH----SSCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTT--------------
T ss_pred HHHHHHHhcccCcHHHHHHHHhc----CCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC--------------
Confidence 55666653 777888888874 2222111 124679999999999999999999773
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-++++.+..|.||||+|+.. +..+|++.|.
T Consensus 250 ----------ad~~~~d~~G~TpL~~A~~~-~~~~iv~~Ll 279 (301)
T 2b0o_E 250 ----------ALVGTVNEAGETALDIARKK-HHKECEELLE 279 (301)
T ss_dssp ----------CCCSCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred ----------CCCCCcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 23466788899999999987 7899999983
No 85
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.61 E-value=7.7e-05 Score=72.96 Aligned_cols=56 Identities=21% Similarity=0.128 Sum_probs=47.5
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+.|+||.|++++..++|++|+... ..+++.....|.||||+|+.. +..+|++.|-
T Consensus 218 ~g~t~L~~A~~~~~~~~v~~Ll~~~-----------------------g~~~~~~~~~g~t~l~~A~~~-~~~~i~~~Ll 273 (285)
T 1wdy_A 218 RGKTPLILAVEKKHLGLVQRLLEQE-----------------------HIEINDTDSDGKTALLLAVEL-KLKKIAELLC 273 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHSS-----------------------SCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcc-----------------------CCCccccCCCCCcHHHHHHHc-CcHHHHHHHH
Confidence 3669999999999999999999732 244667788999999999988 7999999993
No 86
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=97.61 E-value=5.8e-05 Score=74.82 Aligned_cols=85 Identities=18% Similarity=0.124 Sum_probs=66.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+.... --.+.|+||.|++.+..+||++|+.+.
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~----ga~~~~~-----~~~g~tpL~~A~~~~~~~~v~~Ll~~g----------------- 213 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKN----GANKDMQ-----NNREETPLFLAAREGSYETAKVLLDHF----------------- 213 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCc-----CCCCCCHHHHHHHCCCHHHHHHHHHcC-----------------
Confidence 57778888888888888862 2221111 124679999999999999999999873
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~ 837 (851)
-++++.+..|.||||+|+.. |..+|+..|..
T Consensus 214 -------a~~~~~d~~g~tpl~~A~~~-g~~~i~~~l~~ 244 (253)
T 1yyh_A 214 -------ANRDITDHMDRLPRDIAQER-MHHDIVRLLDL 244 (253)
T ss_dssp -------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHC
T ss_pred -------CCccccccCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 24567788999999999988 89999999955
No 87
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=97.59 E-value=5.6e-05 Score=75.46 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=30.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.|-+|+.++-..+++.||.. +.+.... .-.+.|+||+|++.++.++|++|+.+
T Consensus 6 ~L~~A~~~g~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~g~~~~v~~Ll~~ 58 (261)
T 2xai_A 6 PMHEAAIHGHQLSLRNLISQ----GWAVNII-----TADHVSPLHEACLGGHLSCVKILLKH 58 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSSCC-----CTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCCc-----CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 45566777777777777652 1111110 01245777777777777777777754
No 88
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=97.59 E-value=8.7e-05 Score=71.10 Aligned_cols=85 Identities=18% Similarity=0.127 Sum_probs=65.5
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
..|-+|+.++-..+++.||.. +.+.... -..+.++||.|++++..+||++|+.+.
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g---------------- 181 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKN----GANKDMQ-----NNREETPLFLAAREGSYETAKVLLDHF---------------- 181 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CTTCCCHHHHHHHHTCHHHHHHHHHTT----------------
T ss_pred cHHHHHHHcCCHHHHHHHHHc----CCCCCCc-----CCCCcCHHHHHHHcCCHHHHHHHHHcC----------------
Confidence 367788888888888888873 2222111 124679999999999999999999773
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-+++..+..|.||||+|+.. +..+|++.|.
T Consensus 182 --------a~~~~~~~~g~t~l~~A~~~-~~~~i~~~L~ 211 (223)
T 2f8y_A 182 --------ANRDITDHMDRLPRDIAQER-MHHDIVRLLD 211 (223)
T ss_dssp --------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred --------CCCccccccCCCHHHHHHHh-cchHHHHHHH
Confidence 23566678899999999987 7999999993
No 89
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=97.59 E-value=9.9e-05 Score=75.88 Aligned_cols=55 Identities=22% Similarity=0.133 Sum_probs=42.5
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+.|+||.|++.+..++|++|+.+. ..+++..+..|.||||+||.. |..+|++.|
T Consensus 238 ~g~t~L~~a~~~~~~~~v~~Ll~~~-----------------------~~~vn~~d~~G~TpL~~A~~~-g~~~iv~~L 292 (337)
T 4g8k_A 238 RGKTPLILAVEKKHLGLVQRLLEQE-----------------------HIEINDTDSDGKTALLLAVEL-KLKKIAELL 292 (337)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHHTST-----------------------TCCTTCBCTTSCBHHHHHHHT-TCHHHHHHH
T ss_pred CCCCHHHHHHHhhhhHHHHHHHHhc-----------------------CCcccCcCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 3668999999999999998888653 233456677888888888876 788888888
No 90
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=97.53 E-value=6.6e-05 Score=83.17 Aligned_cols=58 Identities=24% Similarity=0.232 Sum_probs=29.9
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCC-chHHHHHhhhhHHHHHHH---cCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEH-PSLDLALTELGLLHRAVR---KNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~-ss~e~~l~em~LLH~AVr---~~s~~mVelLl~~ 780 (851)
.|-.|+..+-..+++.||..= .+.... ......-.+.|+||+||+ .++.+||++||.+
T Consensus 135 ~L~~A~~~g~~~~v~~ll~~g----~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ 196 (497)
T 3lvq_E 135 RLWTAICNRDLLSVLEAFANG----QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 196 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT----CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH
T ss_pred HHHHHHhccCHHHHHHHHhhc----ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc
Confidence 355666666677777777532 221110 000001134566666655 6666666666654
No 91
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=97.53 E-value=9.2e-05 Score=71.29 Aligned_cols=108 Identities=20% Similarity=0.210 Sum_probs=55.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccc-ccccccc--ccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV-SDRLGSE--NKA 795 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~-~~~~~~~--~~~ 795 (851)
.|-+|+..+-..+++.||.. +.+..... -.+.++||.|++.++.++|++|+.+...-. .+..+.. ..+
T Consensus 43 ~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 113 (231)
T 3aji_A 43 ALHWACSAGHTEIVEFLLQL----GVPVNDKD-----DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYA 113 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSCCCC-----TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHh----CCCCCCcC-----CCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 66777888888888877763 12111100 124577777777777777777776532110 0000000 000
Q ss_pred cccCccc--cc----ccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 796 LVDGVHK--GF----LFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 796 ~v~~~~~--~y----~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
...+... .| ..+++..+..|.||||+|+.. |..+++..|-
T Consensus 114 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 159 (231)
T 3aji_A 114 ASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK-GNLKMVHILL 159 (231)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc-CCHHHHHHHH
Confidence 0000000 00 123455566777777777766 5777777773
No 92
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.52 E-value=0.0001 Score=70.41 Aligned_cols=55 Identities=16% Similarity=0.154 Sum_probs=37.0
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
.|.+|+..+-..+++.||..-. +..... .-.+.++||.|++.+..+||++|+.+.
T Consensus 45 ~L~~A~~~~~~~~v~~Ll~~~~----~~~~~~----~~~~~t~L~~A~~~~~~~~v~~Ll~~g 99 (240)
T 3eu9_A 45 LLHWAAINNRIDLVKYYISKGA----IVDQLG----GDLNSTPLHWATRQGHLSMVVQLMKYG 99 (240)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC----CTTCCB----TTTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHHHHHHcCC----cchhhc----CCcCCChhHHHHHcCCHHHHHHHHHcC
Confidence 6778888888888888887311 111000 012458888888888888888888763
No 93
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=97.51 E-value=8.4e-05 Score=82.36 Aligned_cols=84 Identities=19% Similarity=0.182 Sum_probs=64.4
Q ss_pred HHHHhcc---CchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccc
Q 003063 719 LIEFSMD---HEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 719 LL~Fsve---rdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
.|-+||. .+-..+++.||.. +.+..... -.+.|+||+|+..++.++|++||.+.
T Consensus 174 ~Lh~A~~~a~~g~~~~v~~Ll~~----ga~vn~~d-----~~g~TpLh~A~~~g~~~~v~~Ll~~g-------------- 230 (497)
T 3lvq_E 174 VLHLAVKVANQASLPLVDFIIQN----GGHLDAKA-----ADGNTALHYAALYNQPDCLKLLLKGR-------------- 230 (497)
T ss_dssp HHHHHHHTCCTTTHHHHHHHHHH----SCCTTCCC-----SSSCCHHHHHTTTTCHHHHHHHHHTC--------------
T ss_pred HHHHHHHhcccccHHHHHHHHHc----CCCCCccC-----CCCCcHHHHHHHcCCHHHHHHHHHcC--------------
Confidence 5666744 7888899988873 22222111 14789999999999999999999773
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-++++.+..|.||||+|+.. |..+|++.|-
T Consensus 231 ----------a~~~~~d~~g~tpl~~A~~~-~~~~~~~~Ll 260 (497)
T 3lvq_E 231 ----------ALVGTVNEAGETALDIARKK-HHKECEELLE 260 (497)
T ss_dssp ----------CCCSCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred ----------CCCCCcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 23567788999999999977 8999999993
No 94
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=97.51 E-value=0.00014 Score=78.75 Aligned_cols=28 Identities=21% Similarity=0.347 Sum_probs=19.2
Q ss_pred CCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 807 RPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 807 ~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
++++.+..|.||||+|+.. +..+|++.|
T Consensus 293 d~~~~d~~G~TpL~~A~~~-g~~~iv~lL 320 (368)
T 3jue_A 293 DLGARDSEGRDPLTIAMET-ANADIVTLL 320 (368)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCCCcCCCCCCHHHHHHHC-CCHHHHHHH
Confidence 3455667777777777766 677777777
No 95
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=97.50 E-value=9.2e-05 Score=75.33 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=32.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~ 780 (851)
.|-+|+..+-..+++.||.. +.+.... -..+.|+||+|++.++.+||++|+.+
T Consensus 62 ~L~~Aa~~g~~~~v~~Ll~~----g~~~~~~-----~~~g~t~L~~A~~~g~~~~v~~Ll~~ 114 (285)
T 3d9h_A 62 PMHEAAIHGHQLSLRNLISQ----GWAVNII-----TADHVSPLHEACLGGHLSCVKILLKH 114 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCSCEE-----CTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCCc-----CCCCCCHHHHHHHCCcHHHHHHHHHC
Confidence 56677777777777777762 1111100 11355777777777777777777765
No 96
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=97.50 E-value=0.00012 Score=77.53 Aligned_cols=85 Identities=11% Similarity=0.116 Sum_probs=66.4
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++-..+++.||.. +..+.... --.+.|+||.|++.++.+||++||.+.
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~---~~~~~n~~-----d~~g~TpL~~A~~~g~~~iv~~Ll~~g----------------- 336 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGE---KGSNKDKQ-----DEDGKTPIMLAAQEGRIEVVMYLIQQG----------------- 336 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHH---SCCCTTCC-----CTTCCCHHHHHHHHTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHhCCHHHHHHHHHh---cCCCccCc-----CCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------
Confidence 67788999999999998863 22222111 124679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.++++.+..|.||||+|+.. |..+|++.|.
T Consensus 337 -------ad~~~~d~~g~t~l~~A~~~-g~~~iv~~Ll 366 (373)
T 2fo1_E 337 -------ASVEAVDATDHTARQLAQAN-NHHNIVDIFD 366 (373)
T ss_dssp -------CCSSCCCSSSCCHHHHHHHT-TCHHHHHHHH
T ss_pred -------CCccCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 34566788899999999988 8999999994
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=97.49 E-value=7.1e-05 Score=77.05 Aligned_cols=54 Identities=28% Similarity=0.274 Sum_probs=46.7
Q ss_pred hhhHHHHHHHc---CChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHh
Q 003063 758 ELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 834 (851)
Q Consensus 758 em~LLH~AVr~---~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vlda 834 (851)
+.|+||+|++. ++.+||++||.+. -+++..+..|.||||+||.. |..+++..
T Consensus 169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~g------------------------a~in~~d~~g~TpLh~A~~~-g~~~~v~~ 223 (278)
T 1dcq_A 169 DETALHLAVRSVDRTSLHIVDFLVQNS------------------------GNLDKQTGKGSTALHYCCLT-DNAECLKL 223 (278)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHC------------------------SCTTCCCTTCCCHHHHHHHT-TCHHHHHH
T ss_pred CCCcchHHHHhcccchHHHHHHHHHCC------------------------CCccccCCCCCCHHHHHHHc-CCHHHHHH
Confidence 67999999999 8999999999773 23466678899999999987 89999999
Q ss_pred hh
Q 003063 835 LT 836 (851)
Q Consensus 835 Lt 836 (851)
|-
T Consensus 224 Ll 225 (278)
T 1dcq_A 224 LL 225 (278)
T ss_dssp HH
T ss_pred HH
Confidence 94
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=97.49 E-value=5.4e-05 Score=75.61 Aligned_cols=87 Identities=22% Similarity=0.212 Sum_probs=61.7
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+..... .-.+.|+||+|++.++.+||++||.+.
T Consensus 80 ~L~~A~~~g~~~~v~~Ll~~----ga~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~g----------------- 134 (244)
T 3ui2_A 80 ALLFVAGLGSDKCVRLLAEA----GADLDHRD----MRGGLTALHMAAGYVRPEVVEALVELG----------------- 134 (244)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCCC----SSSCCCHHHHHHHTTCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHCCCHHHHHHHHHc----CCCCCcCC----CCCCCCHHHHHHHcCCHHHHHHHHHCC-----------------
Confidence 57788888889999988873 22221111 013779999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcc---------------cCCchhHHHhhhc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAG---------------KDGSEDVLDALTD 837 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~---------------~~gs~~vldaLt~ 837 (851)
-++++.+..|.||||+|+. ..|..+|++.|.+
T Consensus 135 -------a~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 135 -------ADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp -------CCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHH
Confidence 2345566778888888873 2267788888843
No 99
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=97.48 E-value=9.9e-05 Score=73.65 Aligned_cols=106 Identities=16% Similarity=0.025 Sum_probs=51.8
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccc-ccccccc--ccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEV-SDRLGSE--NKA 795 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~-~~~~~~~--~~~ 795 (851)
.|.+|+..+...+++.||.. +.+.... -.+.++||.|++.++.++|++|+.+...-. .+..+.. ..+
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 141 (261)
T 2xai_A 72 PLFNACVSGSWDCVNLLLQH----GASVQPE------SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLA 141 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSSCS------CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCCC------CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 56677777777777777763 1111100 014466666666666666666665431100 0000000 000
Q ss_pred cccCccc--c----cccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 796 LVDGVHK--G----FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 796 ~v~~~~~--~----y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
...+... . +..+++. +..|.||||+||.. +..++++.|-
T Consensus 142 ~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~-~~~~~v~~Ll 186 (261)
T 2xai_A 142 CENQQRACVKKLLESGADVNQ-GKGQDSPLHAVART-ASEELACLLM 186 (261)
T ss_dssp HHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHH-TCHHHHHHHH
T ss_pred HHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHc-CCHHHHHHHH
Confidence 0000000 0 0112332 56788888888877 6778888873
No 100
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=97.46 E-value=0.00011 Score=78.07 Aligned_cols=28 Identities=36% Similarity=0.536 Sum_probs=18.6
Q ss_pred CCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 807 RPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 807 ~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+|+.....|.||||+|+.. |..+|++.|
T Consensus 369 ~~~~~~~~g~t~l~~A~~~-g~~~~~~~l 396 (437)
T 1n11_A 369 SPNEVSSDGTTPLAIAKRL-GYISVTDVL 396 (437)
T ss_dssp CSCCCCSSSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHc-CcHHHHHHH
Confidence 4556666777777777666 566666666
No 101
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=97.45 E-value=0.00014 Score=70.36 Aligned_cols=108 Identities=17% Similarity=0.169 Sum_probs=54.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccc-cccccccc--ccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE-VSDRLGSE--NKA 795 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~-~~~~~~~~--~~~ 795 (851)
.|-+|+..+-..+++.||.. +.+..... -.+.++||.|++.+..++|++|+.+...- ..+..+.. ..+
T Consensus 14 ~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 14 PLHAAAEAGHVDICHMLVQA----GANIDTCS-----EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA 84 (237)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCCC-----TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHc----CCCcCccC-----CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Confidence 56677777777777777652 11111100 12456777777777777777777543110 00000000 000
Q ss_pred cccCccc--cc-----ccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 796 LVDGVHK--GF-----LFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 796 ~v~~~~~--~y-----~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
...+... .| ...++.....|.||||+|+.. +..++++.|-
T Consensus 85 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll 131 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY-KHVDLVKLLL 131 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 0000000 00 134455567788888888776 6777888773
No 102
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=97.45 E-value=0.00015 Score=71.65 Aligned_cols=84 Identities=14% Similarity=0.082 Sum_probs=61.5
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+.++...+++.||.. +.+.... --.+.|+||+|+..++.+||++||.+..
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~----ga~~~~~-----d~~g~tpL~~A~~~~~~~~v~~Ll~~ga---------------- 127 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQF----GVNVNAA-----DSDGWTPLHCAASCNNVQVCKFLVESGA---------------- 127 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHH----TCCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTTC----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCcc-----CCCCCCHHHHHHHcCCHHHHHHHHHcCC----------------
Confidence 57788899999999999873 2222111 1246799999999999999999998742
Q ss_pred CcccccccCCCCCCCCC-Cchhhhhc-ccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAG-LTPIHIAA-GKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~G-lTPLHIAA-~~~gs~~vldaL 835 (851)
+++.....| .||||+|+ ...|..+++..|
T Consensus 128 --------~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 128 --------AVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp --------CTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred --------CcceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 234444444 49999995 345889999988
No 103
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=97.44 E-value=0.00016 Score=73.66 Aligned_cols=82 Identities=21% Similarity=0.246 Sum_probs=61.1
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
..|.+|+..+...+++.||.. +.+.. . .-.+.|+||.|++.++.+||++|+.+.
T Consensus 192 t~L~~A~~~~~~~~v~~Ll~~----ga~~~--~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g---------------- 245 (285)
T 3d9h_A 192 TPLYLACENQQRACVKKLLES----GADVN--Q----GKGQDSPLHAVVRTASEELACLLMDFG---------------- 245 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTT--C----CBTTBCHHHHHHHTTCHHHHHHHHHTT----------------
T ss_pred CHHHHHHHcCcHHHHHHHHHC----CCCCC--C----CCCCCCHHHHHHHcCCHHHHHHHHHCC----------------
Confidence 367788888888888888863 22211 1 124669999999999999999999763
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.++++.+..|.||||+|+. ..+++..|.
T Consensus 246 --------ad~~~~d~~g~t~l~~A~~---~~~~~~~Ll 273 (285)
T 3d9h_A 246 --------ADTQAKNAEGKRPVELVPP---ESPLAQLFL 273 (285)
T ss_dssp --------CCTTCCCTTSCCGGGGSCT---TSHHHHHHH
T ss_pred --------CCCCCcCCCCCCHHHHhcC---ccHHHHHHH
Confidence 3456778899999999993 457888773
No 104
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=97.42 E-value=8.6e-05 Score=78.56 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=38.5
Q ss_pred HHHHHhccCchHHHHHHHHH----HHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcc
Q 003063 718 WLIEFSMDHEWCAVVKKLLH----ILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFV 781 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~----~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~ 781 (851)
-.|-+|+.++-..+++.||. .|.+.+.+..... ..+.|+||.||..++.+||++||.+.
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d-----~~g~TpL~~A~~~g~~~iv~~Ll~~g 189 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMD-----CDENTPLMLAVLARRRRLVAYLMKAG 189 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCC-----TTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCC-----CCCCCHHHHHHHcChHHHHHHHHHCC
Confidence 36677777777766666653 2334333322111 23679999999999999999998764
No 105
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=97.42 E-value=0.00021 Score=74.38 Aligned_cols=45 Identities=29% Similarity=0.394 Sum_probs=38.1
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhccc
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK 825 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~ 825 (851)
.+.||||+||+++..+||++||.+- -++++.+..|.||||+||..
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~G------------------------ad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYG------------------------ADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTT------------------------CCTTCCCTTSCCGGGGTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC------------------------CCCcccCCCCCCHHHHHHhc
Confidence 3679999999999999999999773 24567788999999999864
No 106
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=97.42 E-value=0.0001 Score=71.43 Aligned_cols=57 Identities=19% Similarity=0.207 Sum_probs=47.7
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
.+.++||+|++++..++|++||... .+++..+..|.||||+||.. |..+|+..|-
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g------------------------~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 126 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNR------------------------VGVNGLDKAGSTALYWACHG-GHKDIVEMLF 126 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTT------------------------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCC------------------------CCccccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 3579999999999999999999752 23556678899999999988 7899999995
Q ss_pred cC
Q 003063 837 DD 838 (851)
Q Consensus 837 ~d 838 (851)
+.
T Consensus 127 ~~ 128 (222)
T 3ehr_A 127 TQ 128 (222)
T ss_dssp TS
T ss_pred cC
Confidence 43
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=97.40 E-value=0.00016 Score=78.49 Aligned_cols=53 Identities=23% Similarity=0.169 Sum_probs=30.1
Q ss_pred hhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 758 em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
+.|+||+||..++.+||++||.+. .+++..+..|.||||+|+.. |..+++..|
T Consensus 235 g~TpLh~Aa~~g~~~iv~~LL~~G------------------------advn~~d~~G~TpLh~A~~~-g~~~~v~~L 287 (368)
T 3jue_A 235 NATPLIQATAANSLLACEFLLQNG------------------------ANVNQADSAGRGPLHHATIL-GHTGLACLF 287 (368)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT------------------------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcC------------------------CCCCCCCCCCCCHHHHHHHc-CcHHHHHHH
Confidence 346666666666666666666542 12344455566666666655 455566555
No 108
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=97.40 E-value=9.6e-05 Score=70.02 Aligned_cols=75 Identities=20% Similarity=0.148 Sum_probs=55.3
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|-+|+..+-..+++.||.. +.+..... .-.+.|+||+|+..+..++|++|+.+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~----ga~~~~~~----~~~g~tpL~~A~~~~~~~~v~~Ll~~g----------------- 133 (183)
T 3deo_A 79 ALLFVAGLGSDKCVRLLAEA----GADLDHRD----MRGGLTALHMAAGYVRPEVVEALVELG----------------- 133 (183)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCCC----SSSSCCHHHHHHHTTCHHHHHHHHHHT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCcCC----CCCCCCHHHHHHhcCcHHHHHHHHHcC-----------------
Confidence 56778888888888888862 22221111 023679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhccc
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGK 825 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~ 825 (851)
.+++..+..|.||||+|+..
T Consensus 134 -------a~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 134 -------ADIEVEDERGLTALELAREI 153 (183)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHH
T ss_pred -------CCCcCCCCCCCCHHHHHHHh
Confidence 23567788899999999864
No 109
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=97.35 E-value=0.00016 Score=66.64 Aligned_cols=76 Identities=26% Similarity=0.288 Sum_probs=45.8
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhccccc-cccccccccccccc---Ccc--ccc----ccCCCCCCCCCCc-hhhhhccc
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLE-VSDRLGSENKALVD---GVH--KGF----LFRPDVIGPAGLT-PIHIAAGK 825 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~-~~~~~~~~~~~~v~---~~~--~~y----~F~pd~~Gp~GlT-PLHIAA~~ 825 (851)
.+.++||+||+.+..++|++|+.....- ..+..|. -.+.- +.. ..| ..+++..+..|.| |||+||..
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~--t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~ 88 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGR--RPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAARE 88 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSC--CTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC--CHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHC
Confidence 3569999999999999999999764221 0111110 00000 000 001 1245566777887 88888876
Q ss_pred CCchhHHHhh
Q 003063 826 DGSEDVLDAL 835 (851)
Q Consensus 826 ~gs~~vldaL 835 (851)
|..+++..|
T Consensus 89 -~~~~~v~~L 97 (156)
T 1bi7_B 89 -GFLDTLVVL 97 (156)
T ss_dssp -TCHHHHHHH
T ss_pred -CCHHHHHHH
Confidence 677788777
No 110
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=97.34 E-value=0.00026 Score=72.21 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=23.4
Q ss_pred CCCCCCCCCCch-hhhhcccCCchhHHHhhh
Q 003063 807 RPDVIGPAGLTP-IHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 807 ~pd~~Gp~GlTP-LHIAA~~~gs~~vldaLt 836 (851)
+++..+..|.|| ||+|+.. +..+|+..|-
T Consensus 186 d~n~~~~~g~t~~L~~A~~~-~~~~~v~~Ll 215 (285)
T 3kea_A 186 STNTNNSLLFIPDIKLAIDN-KDIEMLQALF 215 (285)
T ss_dssp HTCTTCCCBCCTTHHHHHHH-TCHHHHHHHT
T ss_pred CCCcccCCCCChHHHHHHHc-CCHHHHHHHH
Confidence 456778889997 9999886 7888888883
No 111
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=97.30 E-value=0.0002 Score=76.12 Aligned_cols=83 Identities=22% Similarity=0.274 Sum_probs=64.6
Q ss_pred HHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhccccccccccccccccccc
Q 003063 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (851)
Q Consensus 719 LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~ 798 (851)
.|.+|+..+...+++.||.. +++..... -.+.|+||.|++.++.++|++|+.+.
T Consensus 281 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~-----~~g~t~L~~A~~~g~~~~v~~Ll~~g----------------- 334 (437)
T 1n11_A 281 PLHLVAQEGHVPVADVLIKH----GVMVDATT-----RMGYTPLHVASHYGNIKLVKFLLQHQ----------------- 334 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHH----TCCTTCCC-----SSCCCHHHHHHHSSCSHHHHHHHHTT-----------------
T ss_pred HHHHHHHcCCHHHHHHHHhC----CccCCCCC-----CCCCCHHHHHHHcCcHHHHHHHHhcC-----------------
Confidence 56778888888999888874 22222111 13679999999999999999999763
Q ss_pred CcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 799 ~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
.+++..+..|.||||+|+.. |..+|++.|
T Consensus 335 -------ad~n~~~~~g~t~L~~A~~~-g~~~iv~~L 363 (437)
T 1n11_A 335 -------ADVNAKTKLGYSPLHQAAQQ-GHTDIVTLL 363 (437)
T ss_dssp -------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred -------CCCCCCCCCCCCHHHHHHHC-ChHHHHHHH
Confidence 23566678899999999987 799999998
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.21 E-value=0.00022 Score=74.30 Aligned_cols=88 Identities=25% Similarity=0.200 Sum_probs=59.1
Q ss_pred HHHhccCchHHHHHHHHHHHHhccccCCCCc-hHHHHHhhhhHHHHHHHc---CChhHHHHHHhcccccccccccccccc
Q 003063 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHP-SLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKA 795 (851)
Q Consensus 720 L~FsverdWcAVvkkLL~~l~~g~v~~g~~s-s~e~~l~em~LLH~AVr~---~s~~mVelLl~~~~~~~~~~~~~~~~~ 795 (851)
|-.|+..+=..+++.||. .+.+..... .......+.|+||.||+. ++.+||++||.+.
T Consensus 155 L~~A~~~g~~~~v~~ll~----~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-------------- 216 (301)
T 2b0o_E 155 LWTAICNRDLLSVLEAFA----NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-------------- 216 (301)
T ss_dssp HHHHHHTTCHHHHHHHHH----TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS--------------
T ss_pred HhhhhhccCHHHHHHHHh----cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC--------------
Confidence 445555555556666653 222222100 000012467999999997 8999999999873
Q ss_pred cccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 796 ~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
-+++..+..|.||||+||.. |..++++.|-
T Consensus 217 ----------advn~~d~~G~TpLh~A~~~-g~~~~v~~Ll 246 (301)
T 2b0o_E 217 ----------GHLDAKAADGNTALHYAALY-NQPDCLKLLL 246 (301)
T ss_dssp ----------SCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred ----------CCCCCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 23456678899999999987 8999999993
No 113
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.20 E-value=0.00047 Score=67.01 Aligned_cols=113 Identities=9% Similarity=-0.032 Sum_probs=64.2
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCC------hhHHHHHHhcccc-ccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS------RPLVDLLLRFVPL-EVSDRLG 790 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s------~~mVelLl~~~~~-~~~~~~~ 790 (851)
-.|-+|+.++-...-..+...|++.+.+..... -.+.||||+|+..++ .+||++||..-.. ...|..|
T Consensus 40 T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-----~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g 114 (186)
T 3t8k_A 40 NILYDVLRNNNDEARYKISMFLINKGADIKSRT-----KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPY 114 (186)
T ss_dssp THHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-----TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGG
T ss_pred CHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-----CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCc
Confidence 367788887755422233344444444433211 247799999999987 5789999986422 1122222
Q ss_pred c-c--ccccccCcc-------cc-----cccCCCCCCCCCCchhhhhcccCCchhHHHhhh
Q 003063 791 S-E--NKALVDGVH-------KG-----FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (851)
Q Consensus 791 ~-~--~~~~v~~~~-------~~-----y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt 836 (851)
. - ..+.-.+.. .. +.-++++.+..|.||||+|+.. +..+++..|.
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~-~~~~~v~~L~ 174 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC-QKPIALKMME 174 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT-TCHHHHHHHH
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 1 0 000000000 01 2334567788888888888876 6777887774
No 114
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=97.16 E-value=0.00026 Score=73.68 Aligned_cols=45 Identities=16% Similarity=-0.040 Sum_probs=34.1
Q ss_pred hhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhccc
Q 003063 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK 825 (851)
Q Consensus 757 ~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~ 825 (851)
.+.||||+|++.++.+||++||..- -+++..+..|+||||+||..
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~~Ll~~G------------------------ad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVKHLVKHG------------------------SNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTT------------------------CCTTBCCTTCCCHHHHHHHS
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC------------------------CCCCCcCCCCCCHHHHHHHh
Confidence 4789999999999999999999763 22344555666666666664
No 115
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.14 E-value=0.00026 Score=68.76 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=41.7
Q ss_pred hhhhHHHHHHHcCCh----hHHHHHHhcccccccccccccccccccCcccccccCCCCCCCCCCchhhhhcccCC-----
Q 003063 757 TELGLLHRAVRKNSR----PLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG----- 827 (851)
Q Consensus 757 ~em~LLH~AVr~~s~----~mVelLl~~~~~~~~~~~~~~~~~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~g----- 827 (851)
.+.||||+|++.+.. +||++||..- -++++.+..|+||||+|+....
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G------------------------advn~~d~~g~TpLh~a~~~~~~~~~~ 92 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKG------------------------ADIKSRTKEGTTLFFPLFQGGGNDITG 92 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTT------------------------CCSSCCCTTCCCTHHHHHHHCTTCHHH
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCC------------------------CCCCCCCCCCCcHHHHHHHcCCcchhh
Confidence 478999999999975 5999999763 3456777888999998887631
Q ss_pred chhHHHhh
Q 003063 828 SEDVLDAL 835 (851)
Q Consensus 828 s~~vldaL 835 (851)
..+|+..|
T Consensus 93 ~~~iv~~L 100 (186)
T 3t8k_A 93 TTELCKIF 100 (186)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 14567776
No 116
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=97.06 E-value=0.00017 Score=78.41 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=61.0
Q ss_pred HHHHHhccCchHHHHHHHHHHHHhccccCCCCchHHHHHhhhhHHHHHHHcCChhHHHHHHhcccccccccccccccccc
Q 003063 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (851)
Q Consensus 718 ~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~e~~l~em~LLH~AVr~~s~~mVelLl~~~~~~~~~~~~~~~~~~v 797 (851)
.-|-+|+.++-..+++.||.. | .+ ......-....|+||.|++.|+.++|++|+.+.+...
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~---g-ad---~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~------------ 190 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCEL---A-PT---EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEA------------ 190 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHS---C-TT---THHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGH------------
T ss_pred CHHHHHHHcCCHHHHHHHHhC---C-CC---ccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCccc------------
Confidence 478889999999999988862 1 00 0001111112699999999999999999997743200
Q ss_pred cCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhhhcCc
Q 003063 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDP 839 (851)
Q Consensus 798 ~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaLt~dP 839 (851)
. +..+..|.||||+||+..|..+|+..|-+.+
T Consensus 191 ---------~-~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 191 ---------T-AMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp ---------H-HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred ---------h-hccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 0 0023347889999884448888888885543
No 117
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=95.94 E-value=0.0032 Score=68.39 Aligned_cols=79 Identities=9% Similarity=0.044 Sum_probs=58.5
Q ss_pred hHHHHHhccCchHHHHHHHHHHHHhccccCCCCchH-HHHHhhhhHHHHHH-HcCChhHHHHHHhccccccccccccccc
Q 003063 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL-DLALTELGLLHRAV-RKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (851)
Q Consensus 717 r~LL~FsverdWcAVvkkLL~~l~~g~v~~g~~ss~-e~~l~em~LLH~AV-r~~s~~mVelLl~~~~~~~~~~~~~~~~ 794 (851)
..-|-+|+.++-..+++.||.. |..... ..-..+.|+||+|+ +.|+.+||++|+...
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~--------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g------------- 222 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCEL--------APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP------------- 222 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHS--------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH-------------
T ss_pred CCHHHHHHHCCCHHHHHHHHHc--------CCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC-------------
Confidence 4467788888888888888862 111111 01234679999999 999999999999631
Q ss_pred ccccCcccccccCCCCCCCCCCchhhhhcccCCchhHHHhh
Q 003063 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (851)
Q Consensus 795 ~~v~~~~~~y~F~pd~~Gp~GlTPLHIAA~~~gs~~vldaL 835 (851)
..|.||||+||.. |..+|+..|
T Consensus 223 ------------------a~~~taL~~Aa~~-g~~evv~lL 244 (376)
T 2aja_A 223 ------------------VMLAYAEIHEFEY-GEKYVNPFI 244 (376)
T ss_dssp ------------------HHHHHHHHCTTTT-TTTTHHHHH
T ss_pred ------------------CccchHHHHHHHC-CCHHHHHHH
Confidence 1178999999987 788899988
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=43.20 E-value=24 Score=31.63 Aligned_cols=39 Identities=21% Similarity=0.252 Sum_probs=33.0
Q ss_pred CceeEEeceeeEecCCceEEEEEeeccCCCCceE-EEEEcCc
Q 003063 547 YSKILSVKPIAVPASERAQFFVKGINLGRSATRL-LCAVEGK 587 (851)
Q Consensus 547 ~p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRl-Lcs~~Gk 587 (851)
.|+|..++|..-.-| +.+.++|.||......+ .+++.|.
T Consensus 7 ~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 7 PPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 589999999988665 99999999998876666 5888883
No 119
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=40.75 E-value=45 Score=36.36 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=36.4
Q ss_pred CCCc-eeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCcccc
Q 003063 545 NNYS-KILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMV 590 (851)
Q Consensus 545 ~~~p-~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~GkYL~ 590 (851)
|+.| +|..+.|..- +..+++++.|.|+......+.|.|.|+-..
T Consensus 16 ~~~p~~i~~~~P~~g--~~~~~~~i~G~nfg~~~~~~~v~~~~~~a~ 60 (433)
T 4hw6_A 16 PKEEIVVEKFLPTEG--RKGTRVVVYGRNFGNDVSKVKVTIGGYPAK 60 (433)
T ss_dssp TTSCCEEEEEESSEE--CTTCEEEEEEECCCSCGGGEEEEETTEEEE
T ss_pred CCCCCEEEEECCCCC--CCCCEEEEEeECCCCCcceeEEEECCEEEE
Confidence 4455 9999999984 667889999999998888999999995443
No 120
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=38.70 E-value=65 Score=28.81 Aligned_cols=45 Identities=9% Similarity=0.057 Sum_probs=37.5
Q ss_pred CceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCccccee
Q 003063 547 YSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQE 592 (851)
Q Consensus 547 ~p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~GkYL~~e 592 (851)
.-+|..++|-+-..+..+.+.|.|.+|... .++.|.|.+.-..+|
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~g-s~~~~~fG~~~vpa~ 50 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEAS-NNYSCLFDQISVPAS 50 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCCS-SCEEEEETTEEEECE
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCCC-ccEEEEECCEEEeEE
Confidence 447999999999999999999999999754 589999988544444
No 121
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.74 E-value=1.1e+02 Score=32.67 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=34.7
Q ss_pred CCCc-eeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcC
Q 003063 545 NNYS-KILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEG 586 (851)
Q Consensus 545 ~~~p-~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~G 586 (851)
|+.| +|..+.|.. ++..+++++.|.|+......+.|.+.|
T Consensus 14 ~~~~~~~~~~~p~~--g~~~~~~~i~g~nfg~~~~~~~v~~~~ 54 (409)
T 3hrp_A 14 PNQPVTVESFMPVE--GKLREKVIVKGSNFGTDKSKVKVYFVD 54 (409)
T ss_dssp TTSCCEEEEEECSE--ECTTCEEEEEEECCCSCGGGEEEEEEC
T ss_pred CCCCcEEEEEcCCC--CCCCcEEEEEeEcCCCCccceEEEECC
Confidence 3444 999999996 456789999999999998999999999
No 122
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=27.87 E-value=1.1e+02 Score=33.17 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=46.8
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEEcCcccceehhcccccCccCccccccceEeeeccCCCCCCCce-
Q 003063 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRG- 626 (851)
Q Consensus 548 p~I~~V~PlAv~ag~~~~~~v~G~NL~~p~tRlLcs~~GkYL~~e~~~~~~~g~~~~~~~dei~~l~~~~~~P~~~Gr~- 626 (851)
|.|..+.|..-. ..+++++.|.|+......+-|.+.|+-... .. .. .+.|. |.+|...|-+
T Consensus 18 ~~i~~~~P~~g~--~~~~~~i~G~nfg~~~~~~~v~~~~~~~~v--~~--~~-------~~~i~-----~~vp~~~~~g~ 79 (430)
T 3tc9_A 18 VVISEFSPKEGG--LGTRMLLYGENFGSDISKIKVTIGGQDSKV--VG--AK-------GKSLY-----CVVPAKAYDGD 79 (430)
T ss_dssp CEEEEEECSEEC--TTCEEEEEEECCCSCGGGEEEEETTEEECE--EE--EC-------SSEEE-----EECCTTCTTCC
T ss_pred CEEEEEcCCCCC--CCCEEEEEEEcCCCCccceEEEECCEEEEE--EE--EC-------CCEEE-----EEeCCCCCCcc
Confidence 499999999875 567899999999988789999999943322 11 11 23444 6688776544
Q ss_pred -EEEEec
Q 003063 627 -FIEIED 632 (851)
Q Consensus 627 -FIEVE~ 632 (851)
-|.|+.
T Consensus 80 ~~v~~~~ 86 (430)
T 3tc9_A 80 IKLSILN 86 (430)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 555554
Done!