Query 003065
Match_columns 851
No_of_seqs 1043 out of 6759
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 12:01:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 9.8E-84 3.4E-88 781.0 38.8 559 26-592 7-745 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.6E-65 8.9E-70 619.5 29.8 493 74-569 201-744 (768)
3 3t6q_A CD180 antigen; protein- 100.0 2.5E-60 8.6E-65 562.7 34.3 506 63-572 14-567 (606)
4 4eco_A Uncharacterized protein 100.0 1.9E-61 6.4E-66 572.5 23.8 488 28-566 27-601 (636)
5 1ziw_A TOLL-like receptor 3; i 100.0 2.2E-59 7.6E-64 562.1 38.9 519 72-591 24-626 (680)
6 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-59 4.5E-64 556.5 33.7 504 59-573 5-566 (606)
7 4ecn_A Leucine-rich repeat pro 100.0 2.4E-59 8E-64 563.0 31.2 505 25-566 263-865 (876)
8 3j0a_A TOLL-like receptor 5; m 100.0 4E-59 1.4E-63 571.2 30.9 497 61-572 14-567 (844)
9 1ziw_A TOLL-like receptor 3; i 100.0 1E-57 3.4E-62 547.8 37.9 499 74-573 50-631 (680)
10 3t6q_A CD180 antigen; protein- 100.0 8.2E-58 2.8E-62 541.1 34.8 506 77-589 16-562 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-56 5.2E-61 530.2 30.9 501 76-591 14-562 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 7.6E-56 2.6E-60 542.2 33.6 498 77-590 8-563 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 4.9E-54 1.7E-58 505.0 29.0 510 72-591 27-560 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 2.7E-54 9.3E-59 504.7 26.5 486 60-570 3-515 (549)
15 2z7x_B TOLL-like receptor 1, v 100.0 2.5E-52 8.5E-57 484.6 16.8 459 76-573 3-489 (520)
16 2z63_A TOLL-like receptor 4, v 100.0 2.2E-50 7.6E-55 473.9 31.3 500 78-591 12-535 (570)
17 4ecn_A Leucine-rich repeat pro 100.0 7.4E-51 2.5E-55 489.2 27.3 442 97-572 323-847 (876)
18 2z81_A CD282 antigen, TOLL-lik 100.0 1.5E-50 5E-55 473.2 26.7 474 61-546 12-514 (549)
19 2z7x_B TOLL-like receptor 1, v 100.0 6.5E-51 2.2E-55 472.7 20.4 435 73-546 21-485 (520)
20 4eco_A Uncharacterized protein 100.0 7.3E-51 2.5E-55 481.8 20.3 501 30-590 26-603 (636)
21 4g8a_A TOLL-like receptor 4; l 100.0 3.3E-48 1.1E-52 461.3 33.9 492 73-573 52-588 (635)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.9E-48 1.3E-52 453.3 25.2 459 76-573 34-518 (562)
23 1ogq_A PGIP-2, polygalacturona 100.0 3.8E-46 1.3E-50 402.3 20.0 292 27-324 2-302 (313)
24 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-44 5.5E-49 429.5 33.2 526 45-589 8-582 (635)
25 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.6E-45 2.9E-49 425.0 25.7 451 98-589 32-512 (562)
26 1jl5_A Outer protein YOPM; leu 100.0 2.9E-45 1E-49 415.1 20.8 404 74-569 12-433 (454)
27 3v47_A TOLL-like receptor 5B a 100.0 6.7E-44 2.3E-48 406.6 26.7 383 148-570 14-413 (455)
28 3v47_A TOLL-like receptor 5B a 100.0 8.9E-44 3.1E-48 405.6 27.0 384 100-547 13-413 (455)
29 1jl5_A Outer protein YOPM; leu 100.0 5.5E-44 1.9E-48 404.6 24.9 388 74-552 35-439 (454)
30 3bz5_A Internalin-J, INLJ; leu 100.0 1.4E-41 4.7E-46 385.3 29.3 364 86-549 31-394 (457)
31 3bz5_A Internalin-J, INLJ; leu 100.0 4E-41 1.4E-45 381.5 27.0 367 107-573 28-395 (457)
32 1o6v_A Internalin A; bacterial 100.0 9.2E-40 3.1E-44 373.1 31.3 346 95-495 44-389 (466)
33 1o6v_A Internalin A; bacterial 100.0 1.6E-39 5.4E-44 371.2 30.8 355 107-542 34-388 (466)
34 2id5_A Lingo-1, leucine rich r 100.0 1.2E-39 4.1E-44 373.7 21.9 345 220-591 14-360 (477)
35 2id5_A Lingo-1, leucine rich r 100.0 6.2E-39 2.1E-43 367.8 22.6 350 171-572 14-363 (477)
36 3o6n_A APL1; leucine-rich repe 100.0 1.5E-37 5.2E-42 346.5 23.1 280 50-350 3-285 (390)
37 3o6n_A APL1; leucine-rich repe 100.0 4.2E-37 1.4E-41 342.9 24.8 334 192-591 44-378 (390)
38 3oja_B Anopheles plasmodium-re 100.0 2.9E-37 9.8E-42 363.3 24.0 334 192-591 50-384 (597)
39 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-37 5.5E-42 328.2 15.7 168 676-851 32-204 (311)
40 3oja_B Anopheles plasmodium-re 100.0 1.1E-36 3.9E-41 358.2 24.2 348 47-471 6-359 (597)
41 4fcg_A Uncharacterized protein 100.0 2.4E-37 8.2E-42 335.5 15.9 280 26-325 22-313 (328)
42 4b9d_A Serine/threonine-protei 100.0 3E-37 1E-41 331.6 12.0 169 675-851 23-195 (350)
43 4fih_A Serine/threonine-protei 100.0 1.6E-36 5.6E-41 325.4 14.4 165 676-851 74-240 (346)
44 4fmz_A Internalin; leucine ric 100.0 5.8E-35 2E-39 320.3 23.8 305 191-542 42-346 (347)
45 3hyh_A Carbon catabolite-derep 100.0 5.4E-36 1.9E-40 312.3 14.5 166 674-851 11-181 (275)
46 4asz_A BDNF/NT-3 growth factor 100.0 2.5E-36 8.5E-41 320.2 10.7 173 676-851 13-200 (299)
47 4fie_A Serine/threonine-protei 100.0 1E-35 3.5E-40 327.1 15.5 165 676-851 151-317 (423)
48 4fmz_A Internalin; leucine ric 100.0 1.5E-34 5E-39 317.0 24.6 307 140-518 40-346 (347)
49 3fpq_A Serine/threonine-protei 100.0 2.4E-35 8.1E-40 310.3 16.6 161 679-851 29-200 (290)
50 4aoj_A High affinity nerve gro 100.0 9.1E-36 3.1E-40 320.3 13.1 172 677-851 42-230 (329)
51 4g3f_A NF-kappa-beta-inducing 100.0 1.2E-35 4E-40 317.9 13.7 165 676-851 58-226 (336)
52 4g31_A Eukaryotic translation 100.0 1E-35 3.6E-40 316.0 13.2 172 675-851 4-200 (299)
53 3omv_A RAF proto-oncogene seri 100.0 1.3E-35 4.3E-40 314.6 12.6 165 676-851 36-204 (307)
54 4gt4_A Tyrosine-protein kinase 100.0 1.1E-35 3.8E-40 316.6 12.1 172 677-851 27-217 (308)
55 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-35 3.8E-40 314.2 8.5 166 676-851 24-196 (304)
56 1ogq_A PGIP-2, polygalacturona 100.0 5.9E-35 2E-39 314.8 13.9 249 289-564 50-303 (313)
57 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-33 4E-38 307.7 24.3 135 386-539 194-330 (332)
58 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-33 9E-38 304.9 25.0 288 219-563 35-331 (332)
59 1xku_A Decorin; proteoglycan, 100.0 3.7E-33 1.3E-37 303.5 22.4 131 409-540 192-330 (330)
60 3hmm_A TGF-beta receptor type- 100.0 6.3E-34 2.1E-38 303.9 14.0 167 677-851 4-182 (303)
61 1xku_A Decorin; proteoglycan, 100.0 1.3E-32 4.5E-37 299.2 24.4 287 243-563 33-330 (330)
62 1z7x_W Ribonuclease inhibitor; 100.0 3E-37 1E-41 352.3 -15.0 86 458-543 314-412 (461)
63 1z7x_W Ribonuclease inhibitor; 100.0 4.6E-37 1.6E-41 350.7 -14.6 386 144-548 3-446 (461)
64 4ase_A Vascular endothelial gr 100.0 1.1E-33 3.7E-38 306.6 12.5 173 676-851 64-257 (353)
65 3v5w_A G-protein coupled recep 100.0 1.4E-32 4.8E-37 315.4 16.8 165 675-851 188-360 (689)
66 4b99_A Mitogen-activated prote 100.0 8.3E-33 2.8E-37 305.0 13.0 166 677-851 55-232 (398)
67 4f9c_A Cell division cycle 7-r 100.0 1.7E-32 5.7E-37 299.4 14.6 165 676-851 21-216 (361)
68 2z80_A TOLL-like receptor 2, v 100.0 2.2E-32 7.5E-37 300.3 13.8 281 58-354 27-318 (353)
69 4fcg_A Uncharacterized protein 100.0 3.9E-33 1.3E-37 302.3 4.8 289 40-351 22-315 (328)
70 3ogk_B Coronatine-insensitive 100.0 1.7E-34 5.8E-39 340.3 -7.0 377 142-544 110-528 (592)
71 2z66_A Variable lymphocyte rec 100.0 2E-31 7E-36 286.5 15.2 286 59-384 5-297 (306)
72 3ogk_B Coronatine-insensitive 100.0 2E-34 6.9E-39 339.7 -9.7 450 60-539 41-548 (592)
73 3uto_A Twitchin; kinase, muscl 100.0 2.7E-31 9.1E-36 307.6 14.6 167 675-851 156-326 (573)
74 2z66_A Variable lymphocyte rec 100.0 1.3E-30 4.3E-35 280.4 18.0 283 100-409 10-298 (306)
75 2z80_A TOLL-like receptor 2, v 100.0 3.4E-30 1.2E-34 282.9 15.8 178 168-349 31-210 (353)
76 1wwl_A Monocyte differentiatio 100.0 2.6E-31 8.8E-36 286.3 6.1 271 50-351 21-310 (312)
77 3g06_A SSPH2 (leucine-rich rep 100.0 6.1E-30 2.1E-34 298.1 16.4 293 47-432 9-307 (622)
78 1wwl_A Monocyte differentiatio 100.0 4E-31 1.4E-35 284.8 4.4 249 118-376 40-311 (312)
79 3zyi_A Leucine-rich repeat-con 100.0 7.1E-29 2.4E-33 281.8 20.2 255 290-573 55-311 (452)
80 3zyj_A Leucine-rich repeat-con 100.0 9.2E-29 3.1E-33 279.9 20.3 255 290-573 44-300 (440)
81 1ozn_A Reticulon 4 receptor; N 100.0 6.2E-29 2.1E-33 264.2 17.7 223 245-494 15-238 (285)
82 1ozn_A Reticulon 4 receptor; N 100.0 1.2E-28 4E-33 262.1 19.1 225 100-352 14-240 (285)
83 3fe3_A MAP/microtubule affinit 100.0 4.4E-29 1.5E-33 270.4 15.7 166 675-851 14-183 (328)
84 1o6l_A RAC-beta serine/threoni 100.0 1E-28 3.6E-33 268.2 17.5 167 675-851 4-175 (337)
85 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.2E-29 2.5E-33 271.2 15.9 168 674-851 21-194 (353)
86 3fxz_A Serine/threonine-protei 100.0 1.8E-28 6.1E-33 262.2 18.3 166 675-851 19-186 (297)
87 4aw2_A Serine/threonine-protei 100.0 5.7E-29 2E-33 278.9 15.0 168 676-851 74-246 (437)
88 3zyj_A Leucine-rich repeat-con 100.0 3.8E-28 1.3E-32 274.8 21.7 241 80-350 50-292 (440)
89 3zyi_A Leucine-rich repeat-con 100.0 3.8E-28 1.3E-32 275.9 21.6 238 83-350 64-303 (452)
90 3v8s_A RHO-associated protein 100.0 5.7E-29 1.9E-33 276.8 14.0 166 676-851 69-239 (410)
91 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-28 3.9E-33 272.0 15.7 172 676-851 65-255 (365)
92 4fr4_A YANK1, serine/threonine 100.0 1.2E-28 4.2E-33 271.6 15.5 166 675-851 14-184 (384)
93 2vd5_A DMPK protein; serine/th 100.0 1.2E-28 4.2E-33 274.3 15.5 168 676-851 61-233 (412)
94 1fot_A TPK1 delta, CAMP-depend 100.0 1.9E-28 6.5E-33 264.1 16.4 164 675-851 5-173 (318)
95 3o53_A Protein LRIM1, AGAP0063 100.0 6E-30 2.1E-34 276.3 4.6 247 286-570 31-281 (317)
96 3zgw_A Maternal embryonic leuc 100.0 1E-28 3.5E-33 269.0 14.2 168 675-851 9-179 (347)
97 3s95_A LIMK-1, LIM domain kina 100.0 2.4E-28 8.2E-33 263.1 16.9 169 676-851 10-192 (310)
98 4dc2_A Protein kinase C IOTA t 100.0 1.3E-28 4.6E-33 272.3 14.9 167 675-851 51-223 (396)
99 3g06_A SSPH2 (leucine-rich rep 100.0 1.6E-27 5.6E-32 277.7 24.8 267 194-552 41-307 (622)
100 1xjd_A Protein kinase C, theta 100.0 1.9E-28 6.6E-33 266.8 15.6 168 674-851 15-188 (345)
101 3o53_A Protein LRIM1, AGAP0063 100.0 2.1E-29 7.1E-34 272.1 7.1 268 74-378 11-280 (317)
102 3a8x_A Protein kinase C IOTA t 100.0 3.1E-28 1.1E-32 265.6 16.1 167 675-851 8-180 (345)
103 2yab_A Death-associated protei 100.0 3.6E-28 1.2E-32 266.4 16.6 165 676-851 12-188 (361)
104 2i0e_A Protein kinase C-beta I 100.0 2.9E-28 1E-32 266.3 15.1 168 674-851 18-191 (353)
105 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.2E-28 1.1E-32 265.9 15.4 164 675-851 40-208 (350)
106 2psq_A Fibroblast growth facto 100.0 2.9E-28 9.9E-33 268.8 14.9 173 676-851 81-275 (370)
107 3c0i_A Peripheral plasma membr 100.0 4.1E-28 1.4E-32 265.8 15.9 170 676-851 24-203 (351)
108 3tki_A Serine/threonine-protei 100.0 1.1E-28 3.8E-33 267.0 11.2 169 675-851 6-177 (323)
109 3qd2_B Eukaryotic translation 100.0 3.5E-28 1.2E-32 264.3 15.0 173 674-851 4-246 (332)
110 1tki_A Titin; serine kinase, m 100.0 3.7E-28 1.3E-32 262.6 15.1 166 676-851 5-173 (321)
111 4eqm_A Protein kinase; transfe 100.0 4.3E-28 1.5E-32 258.9 15.4 167 676-851 11-182 (294)
112 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.3E-28 1.5E-32 263.1 14.6 165 675-851 8-177 (336)
113 2acx_A G protein-coupled recep 99.9 5.7E-28 1.9E-32 277.2 15.9 167 676-851 184-355 (576)
114 3p1a_A MYT1 kinase, membrane-a 99.9 1.3E-27 4.4E-32 257.4 16.8 176 665-851 46-226 (311)
115 3oja_A Leucine-rich immune mol 99.9 1.1E-28 3.9E-33 281.8 8.9 233 290-560 35-270 (487)
116 2o6q_A Variable lymphocyte rec 99.9 3.2E-27 1.1E-31 248.8 18.9 216 58-302 2-218 (270)
117 3soc_A Activin receptor type-2 99.9 5.9E-28 2E-32 261.4 13.5 165 676-851 24-203 (322)
118 2y0a_A Death-associated protei 99.9 1.2E-27 4E-32 259.5 15.7 165 676-851 11-187 (326)
119 2bdw_A Hypothetical protein K1 99.9 9.4E-28 3.2E-32 263.8 15.0 166 675-851 28-200 (362)
120 3o0g_A Cell division protein k 99.9 1.3E-27 4.3E-32 255.1 15.5 166 676-851 2-171 (292)
121 3soa_A Calcium/calmodulin-depe 99.9 1.1E-27 3.9E-32 269.4 15.8 167 675-851 10-183 (444)
122 2r5t_A Serine/threonine-protei 99.9 6E-28 2E-32 265.7 12.9 167 675-851 37-209 (373)
123 3c4z_A Rhodopsin kinase; Ser/T 99.9 1.3E-27 4.4E-32 273.8 15.9 170 676-851 185-359 (543)
124 2pmi_A Negative RE, cyclin-dep 99.9 2E-27 6.8E-32 256.6 16.2 171 675-851 4-178 (317)
125 3oja_A Leucine-rich immune mol 99.9 2.5E-28 8.4E-33 279.0 9.4 250 82-369 19-270 (487)
126 3a62_A Ribosomal protein S6 ki 99.9 1.5E-27 5.3E-32 258.6 14.8 166 676-851 17-191 (327)
127 2izr_A Casein kinase I isoform 99.9 8.6E-28 2.9E-32 261.1 12.6 168 676-851 9-187 (330)
128 2c30_A Serine/threonine-protei 99.9 2.5E-27 8.7E-32 256.2 16.0 163 678-851 47-211 (321)
129 2zv2_A Calcium/calmodulin-depe 99.9 6.3E-28 2.2E-32 258.2 11.2 166 675-851 12-207 (298)
130 4euu_A Serine/threonine-protei 99.9 2.3E-27 7.7E-32 256.5 15.6 168 676-851 9-185 (319)
131 3cbl_A C-FES, proto-oncogene t 99.9 6.2E-28 2.1E-32 267.1 11.2 169 676-851 114-285 (377)
132 2w4o_A Calcium/calmodulin-depe 99.9 1E-27 3.6E-32 262.2 12.7 165 676-851 53-220 (349)
133 3kul_A Ephrin type-A receptor 99.9 1.6E-27 5.6E-32 258.1 14.0 169 676-851 49-224 (325)
134 3uc3_A Serine/threonine-protei 99.9 1.5E-27 5E-32 262.3 13.4 165 676-851 20-187 (361)
135 2y94_A 5'-AMP-activated protei 99.9 1.5E-27 5E-32 270.3 13.7 166 675-851 15-185 (476)
136 1kob_A Twitchin; kinase, intra 99.9 2.6E-27 8.8E-32 262.0 15.2 166 676-851 51-220 (387)
137 4ejn_A RAC-alpha serine/threon 99.9 1.2E-27 4.1E-32 271.1 12.5 167 675-851 147-319 (446)
138 2qkw_B Protein kinase; three-h 99.9 1.3E-27 4.4E-32 258.7 12.3 171 676-851 39-211 (321)
139 3rp9_A Mitogen-activated prote 99.9 1.3E-27 4.4E-32 272.0 12.5 167 676-851 53-253 (458)
140 3l9p_A Anaplastic lymphoma kin 99.9 6.6E-28 2.2E-32 265.8 9.5 173 676-851 71-256 (367)
141 3oz6_A Mitogen-activated prote 99.9 3E-27 1E-31 262.9 14.5 171 671-851 4-200 (388)
142 3gni_B Strad alpha; kinase fol 99.9 4.5E-27 1.5E-31 261.6 15.9 170 676-851 25-205 (389)
143 3f3z_A Calcium/calmodulin-depe 99.9 7.6E-27 2.6E-31 246.9 16.8 165 676-851 9-178 (277)
144 1luf_A Muscle-specific tyrosin 99.9 1.5E-27 5.1E-32 260.7 11.6 173 676-851 47-246 (343)
145 3n9x_A Phosphotransferase; mal 99.9 2.6E-27 8.8E-32 266.9 13.8 167 676-851 26-221 (432)
146 3kn6_A Ribosomal protein S6 ki 99.9 6.1E-27 2.1E-31 253.6 16.0 160 681-851 16-179 (325)
147 2x4f_A Myosin light chain kina 99.9 3.1E-27 1E-31 260.7 13.7 163 679-851 92-258 (373)
148 3p86_A Serine/threonine-protei 99.9 1.7E-27 5.9E-32 255.9 11.4 167 676-851 37-209 (309)
149 3ork_A Serine/threonine protei 99.9 1.2E-27 4E-32 257.8 10.0 168 676-851 12-189 (311)
150 3vhe_A Vascular endothelial gr 99.9 1.7E-27 6E-32 262.0 11.6 173 676-851 22-265 (359)
151 3is5_A Calcium-dependent prote 99.9 4.4E-27 1.5E-31 249.9 13.9 169 676-851 22-196 (285)
152 3sxs_A Cytoplasmic tyrosine-pr 99.9 7.1E-27 2.4E-31 245.9 15.4 167 676-851 8-175 (268)
153 3dls_A PAS domain-containing s 99.9 1.7E-27 5.7E-32 259.1 10.8 167 674-851 22-199 (335)
154 3niz_A Rhodanese family protei 99.9 4.8E-27 1.7E-31 252.8 14.2 166 675-851 20-189 (311)
155 2ivs_A Proto-oncogene tyrosine 99.9 3.5E-27 1.2E-31 254.4 13.1 173 676-851 23-222 (314)
156 1ob3_A PFPK5, cell division co 99.9 2.5E-27 8.6E-32 252.2 11.7 165 676-851 2-170 (288)
157 3tt0_A Basic fibroblast growth 99.9 6E-27 2.1E-31 259.7 15.1 173 676-851 69-263 (382)
158 3fdn_A Serine/threonine-protei 99.9 7.5E-27 2.6E-31 247.3 15.2 165 675-851 8-177 (279)
159 4hcu_A Tyrosine-protein kinase 99.9 3E-27 1E-31 248.9 12.1 167 676-851 10-177 (269)
160 2qol_A Ephrin receptor; recept 99.9 2.7E-27 9.1E-32 261.3 12.1 169 676-851 45-220 (373)
161 2eue_A Carbon catabolite derep 99.9 6.1E-27 2.1E-31 247.4 14.0 165 675-851 12-181 (275)
162 3cok_A Serine/threonine-protei 99.9 7.9E-27 2.7E-31 246.9 14.9 168 675-851 10-182 (278)
163 2i1m_A Macrophage colony-stimu 99.9 2.7E-27 9.2E-32 257.6 11.6 173 676-851 46-236 (333)
164 2p1m_B Transport inhibitor res 99.9 4.6E-31 1.6E-35 311.1 -19.7 457 60-542 34-544 (594)
165 2rku_A Serine/threonine-protei 99.9 1.2E-26 4E-31 247.8 16.3 170 672-851 11-185 (294)
166 2a2a_A Death-associated protei 99.9 9E-27 3.1E-31 252.0 15.6 165 676-851 12-188 (321)
167 1csn_A Casein kinase-1; phosph 99.9 1E-26 3.4E-31 248.8 15.6 168 676-851 10-188 (298)
168 2p1m_B Transport inhibitor res 99.9 2.5E-30 8.4E-35 304.9 -13.7 434 100-563 46-542 (594)
169 3uim_A Brassinosteroid insensi 99.9 5E-27 1.7E-31 254.7 13.2 173 676-851 30-205 (326)
170 4agu_A Cyclin-dependent kinase 99.9 8.9E-27 3E-31 250.9 15.0 167 675-851 2-172 (311)
171 3poz_A Epidermal growth factor 99.9 3.6E-27 1.2E-31 255.8 12.1 168 676-851 15-189 (327)
172 3qup_A Tyrosine-protein kinase 99.9 4.5E-27 1.6E-31 254.6 12.8 173 676-851 23-209 (323)
173 2owb_A Serine/threonine-protei 99.9 1.2E-26 4.1E-31 252.6 16.0 171 671-851 36-211 (335)
174 3kk8_A Calcium/calmodulin depe 99.9 1.8E-26 6.1E-31 245.0 16.7 165 676-851 6-177 (284)
175 3ugc_A Tyrosine-protein kinase 99.9 2.8E-27 9.5E-32 252.8 10.4 169 676-851 10-187 (295)
176 1u5q_A Serine/threonine protei 99.9 1E-26 3.4E-31 254.1 15.0 161 677-851 55-220 (348)
177 1nxk_A MAP kinase-activated pr 99.9 7.1E-27 2.4E-31 260.3 13.9 165 675-851 60-233 (400)
178 3pfq_A PKC-B, PKC-beta, protei 99.9 7.9E-27 2.7E-31 276.3 15.0 168 674-851 339-512 (674)
179 2qr7_A Ribosomal protein S6 ki 99.9 8.1E-27 2.8E-31 254.1 13.9 165 675-851 21-190 (342)
180 1opk_A P150, C-ABL, proto-onco 99.9 4.8E-27 1.6E-31 269.1 12.6 169 676-851 220-389 (495)
181 2yex_A Serine/threonine-protei 99.9 6E-27 2E-31 247.5 12.1 170 674-851 5-177 (276)
182 4e5w_A Tyrosine-protein kinase 99.9 1.5E-26 5.3E-31 247.8 15.5 169 676-851 21-199 (302)
183 1x8b_A WEE1HU, WEE1-like prote 99.9 1.7E-26 5.8E-31 245.6 15.5 168 674-851 9-200 (289)
184 3llt_A Serine/threonine kinase 99.9 2.1E-26 7.3E-31 253.4 16.8 164 676-851 35-229 (360)
185 3q5i_A Protein kinase; CDPK, m 99.9 2.1E-26 7.2E-31 264.9 17.4 165 676-851 36-218 (504)
186 1t46_A HOMO sapiens V-KIT hard 99.9 5.5E-27 1.9E-31 252.7 11.8 173 676-851 23-217 (313)
187 1rjb_A FL cytokine receptor; k 99.9 6.5E-27 2.2E-31 255.8 12.4 173 676-851 45-244 (344)
188 4eut_A Serine/threonine-protei 99.9 6.5E-27 2.2E-31 260.7 12.5 168 676-851 9-185 (396)
189 2vuw_A Serine/threonine-protei 99.9 3.1E-28 1.1E-32 265.3 1.8 159 676-851 20-247 (336)
190 1k9a_A Carboxyl-terminal SRC k 99.9 1.6E-26 5.5E-31 261.8 15.7 163 676-851 193-356 (450)
191 3mwu_A Calmodulin-domain prote 99.9 1.4E-26 4.6E-31 265.4 15.3 166 675-851 21-193 (486)
192 2nru_A Interleukin-1 receptor- 99.9 2.7E-26 9.2E-31 246.6 16.7 166 679-851 34-205 (307)
193 2ac3_A MAP kinase-interacting 99.9 2.5E-26 8.7E-31 247.9 16.5 168 676-851 12-191 (316)
194 3com_A Serine/threonine-protei 99.9 2E-26 6.9E-31 248.5 15.6 169 674-851 27-195 (314)
195 2pvf_A Fibroblast growth facto 99.9 1.4E-26 4.7E-31 252.1 14.4 173 676-851 35-229 (334)
196 2y7j_A Phosphorylase B kinase 99.9 2.7E-26 9.2E-31 252.7 16.8 167 674-851 92-269 (365)
197 2vgo_A Serine/threonine-protei 99.9 2.7E-26 9.2E-31 243.7 16.3 165 675-851 13-182 (284)
198 3g33_A Cell division protein k 99.9 1.6E-26 5.3E-31 248.6 14.5 167 675-851 8-189 (308)
199 3gen_A Tyrosine-protein kinase 99.9 8.9E-27 3.1E-31 247.2 12.1 167 676-851 24-191 (283)
200 2z62_A TOLL-like receptor 4, v 99.9 5.1E-26 1.7E-30 240.5 17.8 212 88-303 21-238 (276)
201 3lij_A Calcium/calmodulin depe 99.9 1.7E-26 5.6E-31 265.1 15.2 165 676-851 37-208 (494)
202 3kfa_A Tyrosine-protein kinase 99.9 6.3E-27 2.2E-31 249.1 10.8 169 676-851 13-182 (288)
203 3kex_A Receptor tyrosine-prote 99.9 3.8E-27 1.3E-31 255.4 9.2 168 676-851 13-187 (325)
204 3bhy_A Death-associated protei 99.9 3.1E-26 1.1E-30 243.0 15.9 165 676-851 5-181 (283)
205 3q4u_A Activin receptor type-1 99.9 2.2E-26 7.5E-31 246.5 14.6 167 676-851 8-187 (301)
206 4fvq_A Tyrosine-protein kinase 99.9 6.6E-27 2.2E-31 249.0 10.4 163 676-851 8-187 (289)
207 3mtl_A Cell division protein k 99.9 5.7E-27 2E-31 253.9 10.1 166 676-851 2-170 (324)
208 3ttj_A Mitogen-activated prote 99.9 5.5E-27 1.9E-31 266.0 10.2 163 675-851 61-233 (464)
209 2a19_B Interferon-induced, dou 99.9 1.4E-26 4.8E-31 245.8 12.6 168 673-851 8-191 (284)
210 3hko_A Calcium/calmodulin-depe 99.9 5.4E-27 1.8E-31 256.6 9.7 174 675-851 25-244 (345)
211 2wtk_C Serine/threonine-protei 99.9 3.3E-26 1.1E-30 245.6 15.5 170 675-851 4-181 (305)
212 2h6d_A 5'-AMP-activated protei 99.9 3.6E-26 1.2E-30 241.5 15.5 165 676-851 11-180 (276)
213 1vzo_A Ribosomal protein S6 ki 99.9 7.8E-27 2.7E-31 256.0 10.7 168 675-851 53-230 (355)
214 1p4o_A Insulin-like growth fac 99.9 1E-26 3.5E-31 251.7 11.4 173 676-851 25-210 (322)
215 3nyv_A Calmodulin-domain prote 99.9 1.4E-26 4.9E-31 265.3 13.1 165 676-851 26-198 (484)
216 2h34_A Serine/threonine-protei 99.9 3.1E-26 1.1E-30 246.4 14.7 170 673-851 31-205 (309)
217 3lb7_A RAF proto-oncogene seri 99.9 1.4E-26 4.7E-31 248.7 11.9 165 676-851 36-204 (307)
218 2zmd_A Dual specificity protei 99.9 2.5E-26 8.6E-31 255.1 14.2 164 677-851 57-226 (390)
219 1cm8_A Phosphorylated MAP kina 99.9 1.6E-26 5.3E-31 254.7 12.4 161 676-851 25-195 (367)
220 2wqm_A Serine/threonine-protei 99.9 2.5E-26 8.4E-31 247.3 13.7 173 673-851 29-206 (310)
221 3i6u_A CDS1, serine/threonine- 99.9 9.4E-27 3.2E-31 261.1 10.8 166 674-851 133-311 (419)
222 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1E-26 3.5E-31 252.4 10.7 168 673-851 31-207 (329)
223 1ua2_A CAK, cell division prot 99.9 1.5E-26 5.2E-31 253.0 12.0 167 675-851 9-182 (346)
224 1phk_A Phosphorylase kinase; g 99.9 6.7E-26 2.3E-30 242.4 16.6 166 675-851 16-193 (298)
225 4f0f_A Serine/threonine-protei 99.9 3E-26 1E-30 243.7 13.8 162 676-851 19-196 (287)
226 3mi9_A Cell division protein k 99.9 2.6E-26 8.9E-31 251.8 13.6 169 675-851 16-198 (351)
227 3dbq_A Dual specificity protei 99.9 2.1E-26 7.3E-31 251.5 12.7 164 677-851 10-179 (343)
228 1zy4_A Serine/threonine-protei 99.9 2.3E-26 8E-31 246.3 12.7 170 675-851 5-200 (303)
229 1t4h_A Serine/threonine-protei 99.9 7.9E-26 2.7E-30 240.8 16.7 163 677-851 27-200 (290)
230 4aaa_A Cyclin-dependent kinase 99.9 1.5E-26 5.1E-31 251.5 11.1 168 674-851 23-194 (331)
231 3lzb_A Epidermal growth factor 99.9 2E-26 6.7E-31 249.9 11.9 168 676-851 15-189 (327)
232 1mp8_A Focal adhesion kinase 1 99.9 1.8E-26 6E-31 244.7 11.2 167 676-851 15-187 (281)
233 3mdy_A Bone morphogenetic prot 99.9 6.5E-26 2.2E-30 247.0 16.0 165 675-851 36-216 (337)
234 2z62_A TOLL-like receptor 4, v 99.9 5.9E-26 2E-30 240.0 15.0 226 317-570 11-242 (276)
235 3a7i_A MST3 kinase, serine/thr 99.9 5.9E-26 2E-30 243.5 15.2 165 676-851 22-189 (303)
236 3lxl_A Tyrosine-protein kinase 99.9 4.4E-26 1.5E-30 247.3 14.3 169 676-851 23-200 (327)
237 3eb0_A Putative uncharacterize 99.9 3.3E-26 1.1E-30 254.0 13.4 166 676-851 7-211 (383)
238 2jam_A Calcium/calmodulin-depe 99.9 5.5E-26 1.9E-30 243.8 14.8 164 676-851 9-177 (304)
239 2clq_A Mitogen-activated prote 99.9 1.1E-25 3.7E-30 240.3 16.8 168 677-851 23-193 (295)
240 3eqc_A Dual specificity mitoge 99.9 2E-26 6.9E-31 253.6 11.3 164 676-851 33-200 (360)
241 2j7t_A Serine/threonine-protei 99.9 1.5E-26 5.1E-31 248.0 10.0 169 674-851 17-187 (302)
242 2r3i_A Cell division protein k 99.9 4.3E-26 1.5E-30 244.0 13.1 168 675-851 2-173 (299)
243 3t9t_A Tyrosine-protein kinase 99.9 3.5E-26 1.2E-30 240.4 12.2 167 676-851 8-175 (267)
244 2eva_A TAK1 kinase - TAB1 chim 99.9 2.1E-26 7.2E-31 247.4 10.7 165 676-851 8-173 (307)
245 3nsz_A CK II alpha, casein kin 99.9 8.3E-26 2.8E-30 245.5 15.3 161 676-851 36-200 (330)
246 1qcf_A Haematopoetic cell kina 99.9 1.9E-26 6.5E-31 261.5 10.6 167 676-851 188-355 (454)
247 3byv_A Rhoptry kinase; malaria 99.9 8.1E-27 2.8E-31 258.3 7.3 166 676-851 73-272 (377)
248 2buj_A Serine/threonine-protei 99.9 3.7E-26 1.2E-30 246.8 12.3 172 676-851 29-213 (317)
249 3fme_A Dual specificity mitoge 99.9 3.5E-26 1.2E-30 243.5 11.8 168 676-851 7-179 (290)
250 2o6q_A Variable lymphocyte rec 99.9 6.4E-25 2.2E-29 231.1 21.1 205 338-569 17-222 (270)
251 2xir_A Vascular endothelial gr 99.9 2E-26 6.7E-31 248.7 9.4 173 676-851 27-220 (316)
252 3gxj_A TGF-beta receptor type- 99.9 9.8E-27 3.3E-31 249.4 6.8 167 676-851 3-182 (303)
253 2yfx_A Tyrosine-protein kinase 99.9 3E-26 1E-30 248.6 10.5 173 676-851 30-215 (327)
254 2vwi_A Serine/threonine-protei 99.9 2E-26 6.7E-31 247.1 8.9 173 676-851 15-196 (303)
255 2w5a_A Serine/threonine-protei 99.9 2.4E-26 8.2E-31 243.4 9.4 171 675-851 5-186 (279)
256 3brb_A Proto-oncogene tyrosine 99.9 5.9E-26 2E-30 244.7 12.6 173 676-851 34-219 (313)
257 1fvr_A Tyrosine-protein kinase 99.9 5.6E-26 1.9E-30 246.5 12.4 171 675-851 24-211 (327)
258 2x7f_A TRAF2 and NCK-interacti 99.9 7.6E-26 2.6E-30 245.3 13.5 168 676-851 24-199 (326)
259 1mqb_A Ephrin type-A receptor 99.9 6E-26 2.1E-30 246.8 12.7 169 676-851 44-220 (333)
260 3og7_A AKAP9-BRAF fusion prote 99.9 3.1E-26 1E-30 243.9 10.1 165 676-851 24-192 (289)
261 3op5_A Serine/threonine-protei 99.9 4.2E-26 1.4E-30 251.3 11.5 168 676-851 35-231 (364)
262 3pls_A Macrophage-stimulating 99.9 7.3E-26 2.5E-30 242.0 13.0 168 677-851 22-198 (298)
263 3qyz_A Mitogen-activated prote 99.9 8.4E-26 2.9E-30 248.9 13.8 166 676-851 27-201 (364)
264 1j1b_A Glycogen synthase kinas 99.9 5.1E-26 1.7E-30 255.2 12.2 165 677-851 55-226 (420)
265 4azs_A Methyltransferase WBDD; 99.9 2.2E-26 7.4E-31 266.5 9.5 156 683-851 241-409 (569)
266 2xrw_A Mitogen-activated prote 99.9 6.3E-26 2.1E-30 250.5 12.7 163 675-851 24-196 (371)
267 3g2f_A Bone morphogenetic prot 99.9 1.1E-25 3.9E-30 245.0 14.5 165 675-851 12-198 (336)
268 1p9a_G Platelet glycoprotein I 99.9 4.2E-25 1.4E-29 234.6 18.5 207 333-570 6-213 (290)
269 3kvw_A DYRK2, dual specificity 99.9 1.5E-25 5.1E-30 252.0 15.8 164 676-851 97-269 (429)
270 2ycf_A Serine/threonine-protei 99.9 4.4E-26 1.5E-30 246.7 11.0 165 675-851 9-186 (322)
271 3f66_A Hepatocyte growth facto 99.9 6.2E-26 2.1E-30 242.7 11.9 169 676-851 25-202 (298)
272 3kmu_A ILK, integrin-linked ki 99.9 7E-26 2.4E-30 238.5 12.2 161 676-851 10-178 (271)
273 3an0_A Dual specificity mitoge 99.9 4.3E-26 1.5E-30 248.8 10.7 168 676-851 51-223 (340)
274 3dtc_A Mitogen-activated prote 99.9 6.6E-26 2.2E-30 238.9 11.7 164 676-851 7-184 (271)
275 3rgf_A Cyclin-dependent kinase 99.9 4.9E-26 1.7E-30 254.6 11.3 170 678-851 22-205 (405)
276 1qpc_A LCK kinase; alpha beta 99.9 8.2E-26 2.8E-30 239.2 12.4 167 676-851 13-180 (279)
277 3lm5_A Serine/threonine-protei 99.9 5.8E-26 2E-30 246.3 11.3 167 676-851 28-203 (327)
278 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 4.5E-26 1.5E-30 258.2 10.7 167 676-851 184-351 (452)
279 1wak_A Serine/threonine-protei 99.9 6.7E-26 2.3E-30 252.8 11.9 181 659-851 20-263 (397)
280 4hgt_A Casein kinase I isoform 99.9 1.3E-25 4.4E-30 239.8 13.4 168 676-851 9-185 (296)
281 3uzp_A CKI-delta, CKID, casein 99.9 2.2E-25 7.5E-30 238.1 15.2 168 676-851 9-185 (296)
282 1byg_A CSK, protein (C-termina 99.9 4E-26 1.4E-30 241.5 9.3 164 675-851 20-184 (278)
283 2w1i_A JAK2; chromosomal rearr 99.9 1.6E-25 5.6E-30 242.7 13.8 169 676-851 41-218 (326)
284 1b6c_B TGF-B superfamily recep 99.9 2.9E-25 1E-29 242.4 15.8 171 672-851 38-221 (342)
285 3aln_A Dual specificity mitoge 99.9 2.4E-25 8.1E-30 241.6 14.8 169 676-851 22-195 (327)
286 3ll6_A Cyclin G-associated kin 99.9 1.7E-25 5.7E-30 243.7 13.4 169 677-851 29-220 (337)
287 3sv0_A Casein kinase I-like; t 99.9 2.4E-25 8.3E-30 252.5 15.2 168 676-851 7-183 (483)
288 3rfs_A Internalin B, repeat mo 99.9 1.2E-25 4E-30 237.0 11.6 163 188-357 80-242 (272)
289 1xbb_A Tyrosine-protein kinase 99.9 2.2E-25 7.7E-30 237.5 13.9 167 676-851 16-190 (291)
290 1u59_A Tyrosine-protein kinase 99.9 1.8E-25 6.2E-30 237.7 13.2 167 677-851 10-183 (287)
291 2wei_A Calmodulin-domain prote 99.9 3.3E-25 1.1E-29 235.7 14.8 168 673-851 19-193 (287)
292 3c1x_A Hepatocyte growth facto 99.9 5.3E-26 1.8E-30 250.6 8.8 168 677-851 90-266 (373)
293 2b9h_A MAP kinase FUS3, mitoge 99.9 2.3E-25 7.8E-30 244.4 13.8 166 676-851 11-192 (353)
294 3cc6_A Protein tyrosine kinase 99.9 1.6E-25 5.5E-30 237.3 12.0 167 676-851 12-184 (281)
295 2v62_A Serine/threonine-protei 99.9 7.3E-26 2.5E-30 247.5 9.5 167 676-851 37-230 (345)
296 2fst_X Mitogen-activated prote 99.9 4.7E-26 1.6E-30 250.6 8.0 161 676-851 29-199 (367)
297 3e3p_A Protein kinase, putativ 99.9 3.3E-25 1.1E-29 243.9 14.7 174 672-851 19-201 (360)
298 3lxp_A Non-receptor tyrosine-p 99.9 2.1E-25 7.1E-30 241.0 12.5 165 678-851 33-207 (318)
299 3rfs_A Internalin B, repeat mo 99.9 1E-24 3.5E-29 229.7 17.2 226 147-386 22-247 (272)
300 2pml_X PFPK7, Ser/Thr protein 99.9 6.6E-26 2.3E-30 248.2 8.4 168 675-851 30-220 (348)
301 4e7w_A Glycogen synthase kinas 99.9 1.5E-25 5E-30 249.4 11.1 165 676-851 40-211 (394)
302 1z57_A Dual specificity protei 99.9 5.4E-25 1.8E-29 239.8 15.4 164 676-851 14-204 (339)
303 2h8h_A Proto-oncogene tyrosine 99.9 1.1E-25 3.6E-30 260.4 9.8 167 676-851 267-434 (535)
304 3q60_A ROP5B; pseudokinase, tr 99.9 1.4E-25 4.9E-30 247.7 10.2 162 677-851 63-261 (371)
305 3pg1_A Mitogen-activated prote 99.9 2E-25 6.7E-30 245.9 11.2 164 676-851 22-203 (362)
306 2ast_B S-phase kinase-associat 99.9 6.7E-27 2.3E-31 254.8 -0.7 266 59-334 35-314 (336)
307 1p9a_G Platelet glycoprotein I 99.9 2.1E-24 7.2E-29 229.3 18.3 180 117-302 6-185 (290)
308 2jii_A Serine/threonine-protei 99.9 9.6E-26 3.3E-30 247.3 8.0 166 676-851 42-238 (352)
309 2i6l_A Mitogen-activated prote 99.9 3.4E-25 1.2E-29 239.3 11.9 166 676-851 11-194 (320)
310 4fl3_A Tyrosine-protein kinase 99.9 3.3E-25 1.1E-29 260.6 12.6 161 682-851 375-542 (635)
311 3fhr_A MAP kinase-activated pr 99.9 8.7E-25 3E-29 237.9 15.0 164 676-851 28-199 (336)
312 2ozo_A Tyrosine-protein kinase 99.9 3E-25 1E-29 260.3 12.1 161 683-851 343-509 (613)
313 4exu_A Mitogen-activated prote 99.9 2.2E-25 7.5E-30 246.1 10.1 160 676-851 42-211 (371)
314 3a99_A Proto-oncogene serine/t 99.9 2.8E-25 9.7E-30 240.1 10.7 164 676-851 43-218 (320)
315 2iwi_A Serine/threonine-protei 99.9 2E-25 7E-30 240.3 9.4 164 676-851 31-208 (312)
316 2pzi_A Probable serine/threoni 99.9 3.4E-25 1.2E-29 264.0 12.2 159 676-851 80-247 (681)
317 1blx_A Cyclin-dependent kinase 99.9 5.8E-25 2E-29 238.3 12.6 166 676-851 11-189 (326)
318 2vx3_A Dual specificity tyrosi 99.9 1.5E-24 5.2E-29 240.4 16.0 167 675-851 53-228 (382)
319 3goz_A Leucine-rich repeat-con 99.9 3E-26 1E-30 252.1 1.9 260 79-359 4-306 (362)
320 1u46_A ACK-1, activated CDC42 99.9 4.3E-25 1.5E-29 235.1 10.8 168 676-851 18-194 (291)
321 3goz_A Leucine-rich repeat-con 99.9 4.5E-26 1.5E-30 250.7 2.5 261 222-522 3-301 (362)
322 2eu9_A Dual specificity protei 99.9 2.1E-24 7.2E-29 236.8 15.7 164 676-851 19-209 (355)
323 3m19_A Variable lymphocyte rec 99.9 3.9E-24 1.3E-28 222.5 16.2 191 59-280 3-194 (251)
324 3cek_A Dual specificity protei 99.9 1.2E-24 4E-29 234.5 12.2 165 676-851 28-198 (313)
325 2xwt_C Thyrotropin receptor; s 99.9 3.8E-24 1.3E-28 220.9 15.5 201 88-298 25-235 (239)
326 2j0j_A Focal adhesion kinase 1 99.9 1.1E-24 3.9E-29 256.9 12.7 167 676-851 390-562 (656)
327 3coi_A Mitogen-activated prote 99.9 4.4E-25 1.5E-29 242.1 8.4 160 676-851 24-193 (353)
328 3qa8_A MGC80376 protein; kinas 99.9 4.1E-25 1.4E-29 255.8 8.4 171 673-851 11-193 (676)
329 1q8y_A SR protein kinase; tran 99.9 1.2E-24 4.1E-29 240.6 11.3 164 676-851 19-205 (373)
330 2dyl_A Dual specificity mitoge 99.9 2E-24 6.8E-29 233.2 12.4 166 675-851 24-194 (318)
331 4glp_A Monocyte differentiatio 99.9 8E-24 2.7E-28 227.5 16.3 222 98-326 65-307 (310)
332 3m19_A Variable lymphocyte rec 99.9 1.2E-23 4.2E-28 218.7 16.4 179 386-567 15-194 (251)
333 2ast_B S-phase kinase-associat 99.9 1.5E-25 5.3E-30 244.0 1.1 252 98-357 48-313 (336)
334 2y4i_B KSR2, HKSR2, kinase sup 99.9 6.4E-25 2.2E-29 237.2 4.8 165 676-851 33-204 (319)
335 2rio_A Serine/threonine-protei 99.9 2.5E-24 8.5E-29 242.5 9.8 168 678-851 17-202 (434)
336 3p23_A Serine/threonine-protei 99.9 1.7E-24 5.7E-29 243.3 7.5 165 677-851 25-196 (432)
337 4glp_A Monocyte differentiatio 99.9 6.2E-24 2.1E-28 228.4 11.1 200 361-566 91-308 (310)
338 3en9_A Glycoprotease, O-sialog 99.9 2E-24 6.7E-29 248.8 7.3 153 679-851 339-506 (540)
339 2ca6_A RAN GTPase-activating p 99.9 8.3E-26 2.9E-30 251.1 -5.8 189 381-569 90-320 (386)
340 3uqc_A Probable conserved tran 99.9 2.2E-23 7.6E-28 221.1 12.6 142 676-827 31-177 (286)
341 2xwt_C Thyrotropin receptor; s 99.9 6E-23 2E-27 211.9 15.5 85 194-278 32-118 (239)
342 2ca6_A RAN GTPase-activating p 99.9 2.2E-25 7.5E-30 247.7 -3.2 256 256-546 23-320 (386)
343 3m2w_A MAP kinase-activated pr 99.9 6.4E-23 2.2E-27 219.3 15.4 148 675-831 16-172 (299)
344 1h6u_A Internalin H; cell adhe 99.9 6E-23 2.1E-27 220.2 15.2 194 93-302 37-230 (308)
345 3cvr_A Invasion plasmid antige 99.9 1.2E-23 4.2E-28 242.0 9.5 208 49-287 32-252 (571)
346 1h6u_A Internalin H; cell adhe 99.9 3.7E-23 1.3E-27 221.9 12.0 210 99-326 21-230 (308)
347 4ay9_X Follicle-stimulating ho 99.9 1.5E-22 5.3E-27 221.3 14.1 243 61-348 9-257 (350)
348 2o6s_A Variable lymphocyte rec 99.9 4.8E-22 1.6E-26 200.4 14.0 185 59-290 5-190 (208)
349 3dzo_A Rhoptry kinase domain; 99.9 7.5E-23 2.5E-27 228.9 8.4 165 677-851 79-277 (413)
350 4ay9_X Follicle-stimulating ho 99.9 1.9E-21 6.6E-26 212.6 17.3 241 124-396 12-257 (350)
351 2o6s_A Variable lymphocyte rec 99.8 1.4E-20 4.7E-25 189.7 17.0 179 171-384 10-188 (208)
352 1zar_A RIO2 kinase; serine kin 99.8 5.2E-22 1.8E-26 209.4 6.7 133 677-830 91-243 (282)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 3.3E-21 1.1E-25 195.8 12.2 140 434-573 33-174 (220)
354 3cvr_A Invasion plasmid antige 99.8 9E-21 3.1E-25 218.1 17.1 188 122-361 60-254 (571)
355 4b8c_D Glucose-repressible alc 99.8 2.4E-22 8.1E-27 240.0 3.3 230 28-275 129-369 (727)
356 2v9t_B SLIT homolog 2 protein 99.8 8.7E-21 3E-25 192.7 12.7 141 433-573 32-173 (220)
357 3e6j_A Variable lymphocyte rec 99.8 2.2E-20 7.5E-25 191.1 15.4 162 53-232 12-174 (229)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-20 5.4E-25 190.8 12.8 157 387-546 13-170 (220)
359 1m9s_A Internalin B; cell inva 99.8 1E-20 3.4E-25 220.3 12.4 197 98-310 22-218 (605)
360 1h6t_A Internalin B; cell adhe 99.8 6.2E-21 2.1E-25 202.7 9.7 172 118-303 43-214 (291)
361 2xot_A Amphoterin-induced prot 99.8 1.2E-20 4E-25 207.2 11.8 182 387-571 20-208 (361)
362 2v9t_B SLIT homolog 2 protein 99.8 8.3E-20 2.8E-24 185.4 14.7 153 388-543 14-166 (220)
363 1m9s_A Internalin B; cell inva 99.8 3.7E-20 1.3E-24 215.5 13.5 196 77-288 25-220 (605)
364 1h6t_A Internalin B; cell adhe 99.8 4.3E-20 1.5E-24 196.1 12.7 186 79-280 30-215 (291)
365 3e6j_A Variable lymphocyte rec 99.8 3.4E-19 1.2E-23 182.2 16.2 136 433-569 40-176 (229)
366 1dce_A Protein (RAB geranylger 99.8 1.9E-21 6.6E-26 225.0 -0.7 202 310-545 346-549 (567)
367 1dce_A Protein (RAB geranylger 99.8 3.7E-21 1.3E-25 222.6 0.6 217 286-536 346-567 (567)
368 2xot_A Amphoterin-induced prot 99.8 1.4E-19 4.8E-24 198.7 11.8 158 386-543 40-203 (361)
369 1w8a_A SLIT protein; signaling 99.8 4.4E-19 1.5E-23 176.0 10.2 130 412-544 11-141 (192)
370 1xeu_A Internalin C; cellular 99.8 1.9E-19 6.5E-24 188.1 7.4 171 95-280 17-187 (263)
371 1xeu_A Internalin C; cellular 99.8 9.6E-19 3.3E-23 182.7 11.5 170 359-543 17-186 (263)
372 4ezg_A Putative uncharacterize 99.8 1.3E-18 4.6E-23 173.4 11.3 157 380-543 39-195 (197)
373 1w8a_A SLIT protein; signaling 99.8 2.5E-18 8.5E-23 170.5 13.1 153 436-591 11-166 (192)
374 4b8c_D Glucose-repressible alc 99.8 1.1E-18 3.8E-23 208.2 10.7 163 222-395 206-369 (727)
375 1zth_A RIO1 serine protein kin 99.8 1.2E-18 4.1E-23 181.5 9.6 139 678-832 49-222 (258)
376 4ezg_A Putative uncharacterize 99.7 3.2E-18 1.1E-22 170.6 10.8 105 142-251 42-146 (197)
377 3sb4_A Hypothetical leucine ri 99.7 3.1E-18 1.1E-22 185.5 9.0 102 432-535 225-327 (329)
378 3sb4_A Hypothetical leucine ri 99.7 1.2E-18 4.1E-23 188.7 5.3 103 408-512 225-328 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 2.1E-17 7.1E-22 163.9 10.3 133 437-573 14-147 (193)
380 2ell_A Acidic leucine-rich nuc 99.7 5E-17 1.7E-21 157.4 10.7 135 95-230 22-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.8E-21 155.0 11.1 132 385-518 24-160 (168)
382 2je0_A Acidic leucine-rich nuc 99.7 6.8E-17 2.3E-21 153.1 8.1 130 95-225 15-148 (149)
383 2wfh_A SLIT homolog 2 protein 99.6 7.1E-16 2.4E-20 152.8 13.5 128 413-544 14-141 (193)
384 2o6r_A Variable lymphocyte rec 99.6 5.3E-16 1.8E-20 151.6 12.4 113 457-569 28-141 (177)
385 2o6r_A Variable lymphocyte rec 99.6 7.4E-16 2.5E-20 150.6 13.3 132 412-546 10-141 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 2.4E-16 8.2E-21 149.3 8.1 127 385-513 17-148 (149)
387 4fdw_A Leucine rich hypothetic 99.6 1.3E-14 4.3E-19 160.5 18.0 227 290-527 136-367 (401)
388 4fdw_A Leucine rich hypothetic 99.6 2.7E-14 9.1E-19 157.9 19.4 265 193-518 113-383 (401)
389 4gyi_A RIO2 kinase; protein ki 99.6 1.5E-15 5.2E-20 163.8 8.4 134 678-830 97-266 (397)
390 1ds9_A Outer arm dynein; leuci 99.6 2.4E-17 8.3E-22 164.3 -5.9 106 96-206 17-128 (198)
391 1ds9_A Outer arm dynein; leuci 99.6 3E-17 1E-21 163.6 -5.7 138 381-523 14-158 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-15 9.1E-20 146.4 8.2 134 91-230 13-153 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.6 3.4E-15 1.2E-19 145.6 7.8 105 434-542 43-153 (176)
394 4fs7_A Uncharacterized protein 99.5 7.7E-14 2.6E-18 154.8 17.4 333 156-533 59-392 (394)
395 4fs7_A Uncharacterized protein 99.5 1.7E-13 5.9E-18 152.0 19.0 122 381-510 272-393 (394)
396 3g39_A Variable lymphocyte rec 99.5 4.8E-14 1.7E-18 136.5 11.2 105 435-542 11-115 (170)
397 3g39_A Variable lymphocyte rec 99.5 6.8E-14 2.3E-18 135.4 11.1 108 459-569 11-119 (170)
398 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.2E-18 134.1 10.8 104 436-542 15-118 (174)
399 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.8E-18 133.7 11.2 108 459-569 14-122 (174)
400 2ifg_A High affinity nerve gro 99.4 5.8E-13 2E-17 145.1 9.7 108 462-571 13-122 (347)
401 3un9_A NLR family member X1; l 99.3 1.9E-14 6.4E-19 157.6 -7.0 166 384-549 71-259 (372)
402 2ifg_A High affinity nerve gro 99.3 1.6E-12 5.6E-17 141.5 7.6 130 438-570 13-146 (347)
403 4gt6_A Cell surface protein; l 99.3 2.8E-11 9.5E-16 134.1 17.2 158 159-324 54-216 (394)
404 3un9_A NLR family member X1; l 99.3 5.9E-14 2E-18 153.6 -5.8 61 121-181 72-139 (372)
405 4gt6_A Cell surface protein; l 99.2 1.8E-10 6E-15 127.6 17.9 328 188-540 58-389 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 2.1E-11 7.3E-16 127.0 9.8 144 673-828 11-213 (263)
407 2ra8_A Uncharacterized protein 99.1 1.7E-11 5.9E-16 132.9 1.1 202 73-300 107-341 (362)
408 1nd4_A Aminoglycoside 3'-phosp 99.1 9.4E-11 3.2E-15 121.8 6.2 138 677-829 21-215 (264)
409 4h09_A Hypothetical leucine ri 99.0 2.2E-08 7.6E-13 110.0 22.3 107 428-537 235-341 (379)
410 4h09_A Hypothetical leucine ri 99.0 2.4E-08 8.3E-13 109.7 21.2 144 379-527 211-354 (379)
411 3rw6_A Nuclear RNA export fact 98.9 8.1E-12 2.8E-16 128.4 -7.7 120 60-181 77-209 (267)
412 3dxp_A Putative acyl-COA dehyd 98.9 1.6E-09 5.5E-14 118.3 9.5 140 680-828 42-248 (359)
413 2ra8_A Uncharacterized protein 98.8 7E-10 2.4E-14 120.2 2.4 180 381-563 135-341 (362)
414 3r70_A Aminoglycoside phosphot 98.6 6.5E-08 2.2E-12 103.6 10.4 137 677-829 38-238 (320)
415 3sg8_A APH(2'')-ID; antibiotic 98.5 1.4E-07 4.6E-12 100.3 9.1 137 681-829 25-224 (304)
416 4gkh_A Aminoglycoside 3'-phosp 98.4 1E-06 3.6E-11 91.6 12.8 143 675-828 24-223 (272)
417 3tdw_A Gentamicin resistance p 98.4 9.2E-07 3.1E-11 93.8 12.2 137 681-829 24-225 (306)
418 3rw6_A Nuclear RNA export fact 98.4 4.5E-08 1.5E-12 100.5 1.6 104 368-473 123-236 (267)
419 1io0_A Tropomodulin; LRR prote 98.4 8.9E-09 3E-13 100.6 -3.6 122 88-230 27-164 (185)
420 1io0_A Tropomodulin; LRR prote 98.4 4E-08 1.4E-12 95.9 -0.3 88 455-542 63-164 (185)
421 3d1u_A Putative fructosamine-3 98.3 2.8E-06 9.5E-11 89.0 11.5 74 680-758 19-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 7.3E-06 2.5E-10 88.9 11.0 145 680-829 45-244 (362)
423 3ats_A Putative uncharacterize 98.0 4.1E-06 1.4E-10 91.0 6.4 78 681-758 25-120 (357)
424 2q83_A YTAA protein; 2635576, 98.0 3.9E-05 1.3E-09 82.5 13.0 143 682-828 38-252 (346)
425 2olc_A MTR kinase, methylthior 97.9 2.7E-05 9.3E-10 85.8 10.5 74 681-756 35-120 (397)
426 3e4g_A ATP synthase subunit S, 97.6 1.3E-05 4.3E-10 76.2 1.7 82 194-275 62-149 (176)
427 3jr1_A Putative fructosamine-3 97.6 0.001 3.4E-08 70.1 15.7 140 681-824 41-232 (312)
428 3e4g_A ATP synthase subunit S, 97.5 1.7E-05 5.8E-10 75.4 1.1 83 217-299 61-149 (176)
429 2pyw_A Uncharacterized protein 97.4 0.00047 1.6E-08 76.4 11.4 71 681-755 39-122 (420)
430 2ppq_A HSK, HK, homoserine kin 97.2 0.00056 1.9E-08 72.7 8.6 145 682-828 28-217 (322)
431 3f7w_A Putative fructosamine-3 97.2 0.00093 3.2E-08 69.8 9.0 75 679-758 18-97 (288)
432 1nw1_A Choline kinase (49.2 KD 97.1 0.0008 2.7E-08 74.5 8.1 72 681-756 78-157 (429)
433 1zyl_A Hypothetical protein YI 97.1 0.002 6.7E-08 68.6 10.7 143 682-828 32-223 (328)
434 3dxq_A Choline/ethanolamine ki 97.0 0.0012 4.2E-08 69.4 8.2 71 680-758 22-95 (301)
435 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00016 5.6E-09 69.9 0.6 61 433-493 98-169 (197)
436 3csv_A Aminoglycoside phosphot 96.8 0.0042 1.4E-07 66.2 10.9 144 682-829 24-218 (333)
437 3rfe_A Platelet glycoprotein I 96.8 0.0015 5.3E-08 58.9 6.3 62 509-572 12-75 (130)
438 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00029 9.9E-09 68.2 1.0 89 430-518 67-170 (197)
439 3feg_A Choline/ethanolamine ki 96.7 0.0031 1.1E-07 68.2 8.9 144 681-828 55-254 (379)
440 3rfe_A Platelet glycoprotein I 96.5 0.0038 1.3E-07 56.3 6.4 56 485-542 12-68 (130)
441 2qg7_A Ethanolamine kinase PV0 96.3 0.0075 2.6E-07 67.0 8.8 73 681-757 113-187 (458)
442 3c5i_A Choline kinase; choline 96.1 0.005 1.7E-07 66.7 5.9 72 682-757 39-120 (369)
443 3i1a_A Spectinomycin phosphotr 95.7 0.037 1.3E-06 59.0 10.2 32 797-828 205-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.2 0.033 1.1E-06 60.5 8.0 143 682-828 58-280 (401)
445 3mes_A Choline kinase; malaria 94.1 0.09 3.1E-06 57.6 7.9 72 682-757 76-156 (424)
446 3g15_A CK, chetk-alpha, cholin 90.4 0.42 1.4E-05 52.0 7.4 30 799-828 245-280 (401)
447 4ano_A ESSB; membrane protein, 78.2 6.2 0.00021 38.3 8.2 87 729-830 48-135 (219)
448 3cxl_A N-chimerin; SH2, RHO-GA 75.6 0.31 1.1E-05 54.1 -2.1 59 680-741 146-214 (463)
449 4ann_A ESSB; membrane protein, 71.0 4 0.00014 39.5 4.7 88 729-830 43-130 (215)
450 3ls8_A Phosphatidylinositol 3- 62.2 46 0.0016 37.6 11.7 46 775-827 454-501 (614)
451 2x6h_A GH13170P, VPS34, phosph 38.4 61 0.0021 37.2 7.9 44 777-827 530-575 (696)
452 2lz0_A Uncharacterized protein 24.3 1.5E+02 0.005 24.4 6.1 37 428-465 15-51 (100)
453 2lz0_A Uncharacterized protein 22.1 1.7E+02 0.0058 24.0 6.0 13 260-272 15-27 (100)
454 1cja_A Protein (actin-fragmin 20.2 1.6E+02 0.0053 30.4 6.3 81 745-830 156-239 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.8e-84 Score=780.97 Aligned_cols=559 Identities=34% Similarity=0.522 Sum_probs=438.9
Q ss_pred CCCchhhHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccceeEecCCCCceEEEecccCCccee---cC------------
Q 003065 26 SLSLNVETQALIQFKSKLKDPHGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGE---IS------------ 90 (851)
Q Consensus 26 ~~~~~~~~~aLl~fk~~~~~~~~~l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---i~------------ 90 (851)
..+.++|++||++||+++.||. .+++|+.+ +|||+|.||+|+ ++||+.|+|++.+++|. +|
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~~~-~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWSSN-KNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT-SCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCCCC-CCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3457899999999999999998 99999865 789999999999 68999999999999997 54
Q ss_pred -----------ccccCCccCcEEeCCCCcccCccCc--ccccCCCCceEecccCcccCCCCC-C-CCCCCCCeEeccCcc
Q 003065 91 -----------SSISALQSLTVLSLPFNVLSGKLPL--ELSNCSNLKVLNVTGNAMVGSVPD-L-SALKNLEIFDLSINY 155 (851)
Q Consensus 91 -----------~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~~~-l-~~l~~L~~L~Ls~N~ 155 (851)
+.++.+++|++|||++|.++|.+|. .|+++++|++|+|++|.+.+..|. + .++++|++|||++|.
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4788889999999999999998888 899999999999999888776554 2 445555555544444
Q ss_pred cCC-------------------------------------------------CCcccccCccccceeecccccCCCCCCc
Q 003065 156 FTG-------------------------------------------------RFPRWVVNLTQLVSLSIGDNVYDEAEIP 186 (851)
Q Consensus 156 l~~-------------------------------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~p 186 (851)
+++ .+|. +.++++|++|++++|.+. +.+|
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~-~~~~ 240 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS-GDFS 240 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCC-SCHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCC-Cccc
Confidence 433 3333 444444444444444444 3344
Q ss_pred ccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCC-CcccEEEeeccCccCcCCcCcCCCC
Q 003065 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKL-QKLWKIELYANNLTGELPAELGNLT 265 (851)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~ 265 (851)
..++++++|++|++++|++++.+|.. .+++|++|++++|++++.+|..+..+ ++|++|+|++|++++.+|..|++++
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~ 318 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCT
T ss_pred HHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCC
Confidence 44444444444444444444332221 22333333333333333444444443 5555555555555555555555555
Q ss_pred cccEEecccccccCCCCcc-ccCcCCccEEEccCCccC-------------------------CCCCCCCCC--cccccE
Q 003065 266 LLQEFDISSNQMYGKLPEE-IGNLKNLTVFQCFKNNFS-------------------------GEFPSGFGD--MRKLFA 317 (851)
Q Consensus 266 ~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~l~~N~l~-------------------------~~~p~~~~~--l~~L~~ 317 (851)
+|++|++++|++++.+|.. +.++++|++|++++|+++ +.+|..+.. +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 5555555555555444443 455555555555555544 444444444 567777
Q ss_pred EEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCcc
Q 003065 318 FSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHL 397 (851)
Q Consensus 318 L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l 397 (851)
|++++|++++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++.+|.+.+.+|..+..+++|++|+|++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 88888888878888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCcccc
Q 003065 398 SGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSAL 477 (851)
Q Consensus 398 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 477 (851)
++.+|..+..+++|++|++++|++++.+|.+++.+++|++|+|++|+++|.+|..++.+++|++|++++|+++|.+|..+
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877543
Q ss_pred ----------------------------------------------------------------------ccCCcccEEE
Q 003065 478 ----------------------------------------------------------------------GALRQLSSLH 487 (851)
Q Consensus 478 ----------------------------------------------------------------------~~l~~L~~L~ 487 (851)
+.++.|+.||
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 3357799999
Q ss_pred ecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccc
Q 003065 488 LEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSG 566 (851)
Q Consensus 488 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~ 566 (851)
|++|+++|.+|.++++++.|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+ .|+.||+++|+++|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred cCCcccccCCC-CccccCCCCCCCCcc
Q 003065 567 SVPLDFLRMGG-DGAFAGNEGLCLDQS 592 (851)
Q Consensus 567 ~~p~~~~~~~~-~~~~~gn~~lc~~~~ 592 (851)
.||...++.++ ..+|.||+++||.|.
T Consensus 719 ~iP~~~~~~~~~~~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 719 PIPEMGQFETFPPAKFLNNPGLCGYPL 745 (768)
T ss_dssp ECCSSSSGGGSCGGGGCSCTEEESTTS
T ss_pred cCCCchhhccCCHHHhcCCchhcCCCC
Confidence 99999888777 788999999999873
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.6e-65 Score=619.54 Aligned_cols=493 Identities=28% Similarity=0.463 Sum_probs=314.2
Q ss_pred ceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccC
Q 003065 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (851)
Q Consensus 74 ~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (851)
+++.|+++++.+++.+|. ++.+++|++|+|++|.+++.+|..|+++++|++|+|++|.+++.+|.. .+++|++|+|++
T Consensus 201 ~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~ 278 (768)
T 3rgz_A 201 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAE 278 (768)
T ss_dssp TCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCS
T ss_pred cCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcC
Confidence 344555555555554444 555555555555555555555555555555555555555555544444 455555555555
Q ss_pred cccCCCCcccccCc-cccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcc-cccccccCccccccccccc
Q 003065 154 NYFTGRFPRWVVNL-TQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPES-ISELRELGTLDICRNKISG 231 (851)
Q Consensus 154 N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~i~~ 231 (851)
|.+++.+|..+..+ ++|++|++++|.+. +.+|..++++++|++|+|++|++++.+|.. +.++++|++|++++|++++
T Consensus 279 n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~ 357 (768)
T 3rgz_A 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFY-GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSG 357 (768)
T ss_dssp SEEEESCCCCSCTTCTTCSEEECCSSEEE-ECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEE
T ss_pred CccCCccCHHHHhhcCcCCEEECcCCcCC-CccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCc
Confidence 55555555555443 55555555555554 345555555555555555555555555543 5555555555555555555
Q ss_pred cccccccCCC-cccEEEeeccCccCcCCcCcCC--CCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCC
Q 003065 232 EFPRSIRKLQ-KLWKIELYANNLTGELPAELGN--LTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSG 308 (851)
Q Consensus 232 ~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~ 308 (851)
.+|..+.+++ +|++|++++|++++.+|..+.. +++|++|++++|++++.+|..+.++++|++|++++|++++.+|..
T Consensus 358 ~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 437 (768)
T 3rgz_A 358 ELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437 (768)
T ss_dssp CCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGG
T ss_pred cccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHH
Confidence 5555555554 5555555555555555555544 555555555555555555555555555555555555555555555
Q ss_pred CCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccc
Q 003065 309 FGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQ 388 (851)
Q Consensus 309 ~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~ 388 (851)
++.+++|+.|++++|++++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++.+|++.+.+|.+++.+++|+
T Consensus 438 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 517 (768)
T 3rgz_A 438 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred HhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCC
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred eeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCC----------------------------------
Q 003065 389 RLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTS---------------------------------- 434 (851)
Q Consensus 389 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~---------------------------------- 434 (851)
+|+|++|+++|.+|..+..+++|+.|++++|+++|.+|..+.....
T Consensus 518 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (768)
T 3rgz_A 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597 (768)
T ss_dssp EEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECT
T ss_pred EEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccc
Confidence 5555555555555555555555555555555555555544433221
Q ss_pred ------------CCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcc
Q 003065 435 ------------LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMG 502 (851)
Q Consensus 435 ------------L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 502 (851)
+..++++.|.+.|.+|..+..+++|+.|||++|+++|.+|..++.++.|+.|+|++|+++|.+|..++
T Consensus 598 ~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~ 677 (768)
T 3rgz_A 598 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677 (768)
T ss_dssp TCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHh
Confidence 12223334555556666667778999999999999999999999999999999999999999999999
Q ss_pred cccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccccceEEeCcCCcccccCC
Q 003065 503 DCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVP 569 (851)
Q Consensus 503 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~L~~l~ls~N~l~~~~p 569 (851)
++++|+.|||++|+++|.+|..+..+++|+.|||++|+|+|.||..-.-..+....+.+|+.-|-.|
T Consensus 678 ~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 678 DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp GCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 9999999999999999999999999999999999999999999986322245555677887444333
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.5e-60 Score=562.67 Aligned_cols=506 Identities=18% Similarity=0.191 Sum_probs=453.6
Q ss_pred cceeEecCC---------CCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcc
Q 003065 63 FSGITCDSV---------TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAM 133 (851)
Q Consensus 63 w~gv~c~~~---------~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l 133 (851)
+.-|.|... +..++.|+++++.+++..|.+|+.+++|++|+|++|++++..|.+|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 455778532 35789999999999988889999999999999999999988899999999999999999999
Q ss_pred cCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcc
Q 003065 134 VGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPES 212 (851)
Q Consensus 134 ~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 212 (851)
++..|. ++++++|++|+|++|.+++..+..+.++++|++|++++|.+.....|..+. +++|++|++++|++++..|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP-TEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC-CTTCCEEECCSSCCCEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccC-CcccCEEEcccCcccccChhh
Confidence 988775 999999999999999999887889999999999999999998445555554 999999999999999888889
Q ss_pred cccccccC--ccccccccccccccccccCCCcccEEEeeccCcc--------------------------CcCCcCcCCC
Q 003065 213 ISELRELG--TLDICRNKISGEFPRSIRKLQKLWKIELYANNLT--------------------------GELPAELGNL 264 (851)
Q Consensus 213 ~~~l~~L~--~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~--------------------------~~~p~~~~~l 264 (851)
|+.+++|+ +|++++|++++..|..|.. .+|++|++++|... ...+..+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999999 8999999999877776654 68999999887511 1112223333
Q ss_pred C--cccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCcccee
Q 003065 265 T--LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDV 342 (851)
Q Consensus 265 ~--~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 342 (851)
. +|+.|++++|++++..+..|.++++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 2 7999999999999888888999999999999999999 788899999999999999999998889999999999999
Q ss_pred eccCCcccccCchh-hhhhcchHHHHhccCCccccc--cccccCccccceeccccCccccccCCcccCccccceEEecCC
Q 003065 343 DISENQFSGSFPKY-LCEKRKLLNLLALSNNFSGEV--PNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDN 419 (851)
Q Consensus 343 ~Ls~N~l~~~~p~~-~~~~~~L~~l~l~~n~~~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 419 (851)
++++|.+.+.+|.. +..+++|+++++.+|.+.+.. |..+..+++|++|++++|++++..|..+..+++|+.|++++|
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 410 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT 410 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence 99999999777665 889999999999999999877 888999999999999999999999999999999999999999
Q ss_pred cCCCCCCc-ccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCC---CccccccCCcccEEEecCCcccC
Q 003065 420 DFTGGISP-LIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK---IPSALGALRQLSSLHLEENALTG 495 (851)
Q Consensus 420 ~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~ 495 (851)
++++..+. .+..+++|+.|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|+|++|++++
T Consensus 411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 490 (606)
T 3t6q_A 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490 (606)
T ss_dssp CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCE
T ss_pred cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCc
Confidence 99988665 489999999999999999988999999999999999999999873 34679999999999999999999
Q ss_pred CCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCccc
Q 003065 496 SIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDF 572 (851)
Q Consensus 496 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~ 572 (851)
..|..|+.+++|+.|+|++|++++.+|..+..+++| .|+|++|++++.+|..+..+ .|+.+++++|+|.|.++..+
T Consensus 491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 567 (606)
T 3t6q_A 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIY 567 (606)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHH
T ss_pred cChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHH
Confidence 999999999999999999999999999999999999 99999999998888888888 89999999999999998543
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.9e-61 Score=572.52 Aligned_cols=488 Identities=21% Similarity=0.302 Sum_probs=312.3
Q ss_pred CchhhHHHHHHHHHhcCCC-CC-------CCCCCCCCCCCCccc---ceeEecCCCCceEEEecccCCcceecCccccCC
Q 003065 28 SLNVETQALIQFKSKLKDP-HG-------VLDSWKESADSPCGF---SGITCDSVTGRVTEISFDNKSLSGEISSSISAL 96 (851)
Q Consensus 28 ~~~~~~~aLl~fk~~~~~~-~~-------~l~sW~~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l 96 (851)
....|+.||.+||+++.++ +. ...+|+.+ .|||.| .||+|+.. |||++|+|++++++|.+|++|++|
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGC
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcC
Confidence 3457999999999998653 22 34589976 789999 99999865 899999999999999999999999
Q ss_pred ccCcEEeCCCCcc------cC------ccCcccccCCCCceEecccCcccCCCCC-CCC-CCC-----------------
Q 003065 97 QSLTVLSLPFNVL------SG------KLPLELSNCSNLKVLNVTGNAMVGSVPD-LSA-LKN----------------- 145 (851)
Q Consensus 97 ~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~-l~~----------------- 145 (851)
++|++|+|++|.+ .| .+|.+. +.+|+ +++++|.+.+.+|. +.. +.+
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 181 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRI 181 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccccccc
Confidence 9999999999977 33 455544 56777 88888888877665 431 111
Q ss_pred -CCeEecc--CcccCCCCcccccCccccceeecccccCCCCC-----------------Cccccc--CCCCCCeEecccc
Q 003065 146 -LEIFDLS--INYFTGRFPRWVVNLTQLVSLSIGDNVYDEAE-----------------IPESIG--NLKNLTYLFLAHC 203 (851)
Q Consensus 146 -L~~L~Ls--~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-----------------~p~~~~--~l~~L~~L~L~~n 203 (851)
++.+.+. .|++++ +|..++++++|++|+|++|.++ +. +|+.++ ++++|++|+|++|
T Consensus 182 ~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~-~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 182 TLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFV-AENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCC-GGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred chhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccc-cccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 2222222 456666 6666666777777777766665 32 666666 6666666666666
Q ss_pred cccccCCcccccccccCcccccccc-ccc-cccccccCC------CcccEEEeeccCccCcCCc--CcCCCCcccEEecc
Q 003065 204 NLRGRIPESISELRELGTLDICRNK-ISG-EFPRSIRKL------QKLWKIELYANNLTGELPA--ELGNLTLLQEFDIS 273 (851)
Q Consensus 204 ~l~~~~p~~~~~l~~L~~L~L~~N~-i~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls 273 (851)
++.+.+|..|+++++|++|++++|+ +++ .+|..+.++ ++|++|++++|+++ .+|. .++++++|++|+++
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~ 338 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECL 338 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECC
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCc
Confidence 6666666666666666666666666 666 566666554 66666666666666 5665 66666666666666
Q ss_pred cccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCccc-ccEEEeccCcCCCCCCCccCCCC--ccceeeccCCccc
Q 003065 274 SNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK-LFAFSIYGNRFSGPFPENLGRYT--ALTDVDISENQFS 350 (851)
Q Consensus 274 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~ 350 (851)
+|+++|.+| .+.++++|++|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+.... +|+.|++++|+++
T Consensus 339 ~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~ 415 (636)
T 4eco_A 339 YNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIG 415 (636)
T ss_dssp SCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred CCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCC
Confidence 666666666 6666666666666666666 55666666666 666666666666 5555555433 5666666666665
Q ss_pred ccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCc-ccCccccceEEecCCcCCCCCCccc
Q 003065 351 GSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDG-LWALPNVGMLDFGDNDFTGGISPLI 429 (851)
Q Consensus 351 ~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~~ 429 (851)
+.+|..+... ......+++|++|+|++|+++ .+|.. +..+++|++|+|++|+++..++..+
T Consensus 416 ~~~p~~l~~~-----------------~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~ 477 (636)
T 4eco_A 416 SVDGKNFDPL-----------------DPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSL 477 (636)
T ss_dssp TTTTCSSCTT-----------------CSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSS
T ss_pred Ccchhhhccc-----------------ccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHh
Confidence 5444433210 000113445666666666666 33433 3345666666666666664333333
Q ss_pred ccCC-------CCCeEecCCCcceeeCCcccc--cCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCC
Q 003065 430 GLST-------SLSQLVLQNNRFSGELPSELG--RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNE 500 (851)
Q Consensus 430 ~~~~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 500 (851)
.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 478 ~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~-------- 547 (636)
T 4eco_A 478 KDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR-------- 547 (636)
T ss_dssp EETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB--------
T ss_pred ccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc--------
Confidence 3222 5555555555555 4555554 55555555555555554 55555555555555554433
Q ss_pred cccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccccceEEeCcCCcccc
Q 003065 501 MGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSG 566 (851)
Q Consensus 501 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~L~~l~ls~N~l~~ 566 (851)
++++|++.+.+|.++..+++|+.|+|++|++ +.+|..+. -.|+.||+++|++.+
T Consensus 548 ----------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 548 ----------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNIS 601 (636)
T ss_dssp ----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCE
T ss_pred ----------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCcc
Confidence 2256667777777777777777777777777 46776654 367777777776664
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.2e-59 Score=562.14 Aligned_cols=519 Identities=19% Similarity=0.181 Sum_probs=397.9
Q ss_pred CCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEe
Q 003065 72 TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFD 150 (851)
Q Consensus 72 ~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 150 (851)
..+++.|+|+++.+++..+..++.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++.++. |+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35899999999999987778899999999999999999999999999999999999999999988875 99999999999
Q ss_pred ccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccc--cccccCcccccccc
Q 003065 151 LSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESIS--ELRELGTLDICRNK 228 (851)
Q Consensus 151 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~L~~N~ 228 (851)
|++|.+++..|..|.++++|++|++++|.+. +..|..++++++|++|++++|++++..+..+. .+++|++|++++|+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLS-STKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCS-CCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCccc-ccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999888899999999999999999998 55677889999999999999999977776654 45789999999998
Q ss_pred ccccccccccCC---------------------------CcccEEEeeccCccCcCCcCcCCCCc--ccEEecccccccC
Q 003065 229 ISGEFPRSIRKL---------------------------QKLWKIELYANNLTGELPAELGNLTL--LQEFDISSNQMYG 279 (851)
Q Consensus 229 i~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 279 (851)
+++..|..|..+ ++|+.|++++|.+++..|..|.+++. |++|++++|++++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 887777666544 34556666666666666666666644 7777777777766
Q ss_pred CCCccccCcCCccEEEccCCccCCCCCCCCCCcc---------------------------------cccEEEeccCcCC
Q 003065 280 KLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMR---------------------------------KLFAFSIYGNRFS 326 (851)
Q Consensus 280 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~---------------------------------~L~~L~l~~N~l~ 326 (851)
..|..|.++++|++|++++|++++..|..|.+++ +|++|++++|+++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 6666677777777777777776665555555544 4555555555555
Q ss_pred CCCCCccCCCCccceeeccCCccccc-Cc-hhhhh--hcchHHHHhccCCccccccccccCccccceeccccCccccccC
Q 003065 327 GPFPENLGRYTALTDVDISENQFSGS-FP-KYLCE--KRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIP 402 (851)
Q Consensus 327 ~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p-~~~~~--~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 402 (851)
+..+..|..+++|++|++++|.+++. ++ ..+.. .++|+.+++.+|++.+..|..|..+++|++|+|++|++++.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 55555555555555555555543221 11 11111 1345566666677777777888888888888888888877666
Q ss_pred -CcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcce--eeCCcccccCCCCcEEeccCccccCCCcccccc
Q 003065 403 -DGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFS--GELPSELGRLTNLERLILTNNNFSGKIPSALGA 479 (851)
Q Consensus 403 -~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 479 (851)
..+.++++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..|..+++|++|++++|++++..|..|.+
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 502 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG 502 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcc
Confidence 56777888888888888888877888888888888888888876 467888888889999999999998888888888
Q ss_pred CCcccEEEecCCcccCCCC--------CCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCccccc
Q 003065 480 LRQLSSLHLEENALTGSIP--------NEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMK 551 (851)
Q Consensus 480 l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 551 (851)
+++|++|+|++|++++..+ ..++.+++|+.|+|++|+++...+..|..+++|+.|+|++|++++..|..+..
T Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 582 (680)
T 1ziw_A 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNN 582 (680)
T ss_dssp CTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCC
Confidence 8999999999998875422 23788888999999999998554457888999999999999999555555677
Q ss_pred c-cceEEeCcCCcccccCCcccc-c-CCC-CccccCCCCCCCCc
Q 003065 552 L-KLSSIDLSENQLSGSVPLDFL-R-MGG-DGAFAGNEGLCLDQ 591 (851)
Q Consensus 552 l-~L~~l~ls~N~l~~~~p~~~~-~-~~~-~~~~~gn~~lc~~~ 591 (851)
+ .|+.||+++|++++..|..+. . ... .-...+||+.|..+
T Consensus 583 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 583 QVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 7 899999999999887665432 1 111 34457888888643
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-59 Score=556.53 Aligned_cols=504 Identities=20% Similarity=0.176 Sum_probs=452.5
Q ss_pred CCccc----ceeEecC---------CCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCce
Q 003065 59 SPCGF----SGITCDS---------VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKV 125 (851)
Q Consensus 59 ~~c~w----~gv~c~~---------~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 125 (851)
+||.| ..|.|.. ...+++.|+|+++.+++..+..++.+++|++|+|++|.+++..|.+|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 45655 2467753 2357999999999999988889999999999999999999888999999999999
Q ss_pred EecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEeccccc
Q 003065 126 LNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCN 204 (851)
Q Consensus 126 L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~ 204 (851)
|+|++|.+++.+|. ++++++|++|+|++|.+++..+..+.++++|++|++++|.+....+|..++++++|++|++++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 99999999998776 99999999999999999988888999999999999999999866789999999999999999999
Q ss_pred ccccCCcccccccccC----ccccccccccccccccccCCCcccEEEeeccCcc-CcCCcCcCCCCcccEEec-------
Q 003065 205 LRGRIPESISELRELG----TLDICRNKISGEFPRSIRKLQKLWKIELYANNLT-GELPAELGNLTLLQEFDI------- 272 (851)
Q Consensus 205 l~~~~p~~~~~l~~L~----~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L------- 272 (851)
+++..|..|+.+++|+ +|++++|++++..+..+... +|++|++++|.++ +..|..+.+++.|+.+++
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 9999899999888876 79999999997666666555 9999999999986 355566666776666655
Q ss_pred --------------------------ccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCC
Q 003065 273 --------------------------SSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS 326 (851)
Q Consensus 273 --------------------------s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 326 (851)
..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|++
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l- 319 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL- 319 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-
Confidence 66777777777 889999999999999997 456 899999999999999999
Q ss_pred CCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCcccc--ccccccCccccceeccccCccccccCCc
Q 003065 327 GPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGE--VPNSYADCKTIQRLRISDNHLSGKIPDG 404 (851)
Q Consensus 327 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 404 (851)
+.+| .+ .+++|+.|++++|+..+.+ .+..+++|+++++++|++.+. +|..+..+++|++|++++|.++ .+|..
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~ 394 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSAN 394 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCC
T ss_pred cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhh
Confidence 5788 45 9999999999999766544 566889999999999999877 4888999999999999999998 47788
Q ss_pred ccCccccceEEecCCcCCCCCC-cccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccC-CCccccccCCc
Q 003065 405 LWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSG-KIPSALGALRQ 482 (851)
Q Consensus 405 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~ 482 (851)
+..+++|+.|++++|++++.++ ..+..+++|+.|++++|++++..|..+..+++|++|++++|.+++ .+|..+..+++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 9999999999999999999888 789999999999999999999999999999999999999999998 47899999999
Q ss_pred ccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc--cceEEeCc
Q 003065 483 LSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL--KLSSIDLS 560 (851)
Q Consensus 483 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l--~L~~l~ls 560 (851)
|+.|+|++|++++..|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|++|+++ .+|..+..+ .|+.|+++
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~ 553 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLT 553 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECC
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEcc
Confidence 999999999999999999999999999999999999999999999999999999999999 789888887 49999999
Q ss_pred CCcccccCCcccc
Q 003065 561 ENQLSGSVPLDFL 573 (851)
Q Consensus 561 ~N~l~~~~p~~~~ 573 (851)
+|+|.|.++..|.
T Consensus 554 ~N~~~c~c~~~~~ 566 (606)
T 3vq2_A 554 NNSVACICEHQKF 566 (606)
T ss_dssp SCCCCCSSTTHHH
T ss_pred CCCcccCCccHHH
Confidence 9999999997654
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.4e-59 Score=562.98 Aligned_cols=505 Identities=20% Similarity=0.265 Sum_probs=339.3
Q ss_pred CCCCchhhHHHHHHHHHhcCCCCCCCCCCCCCC----CCC--ccc------------ceeEecCCCCceEEEecccCCcc
Q 003065 25 PSLSLNVETQALIQFKSKLKDPHGVLDSWKESA----DSP--CGF------------SGITCDSVTGRVTEISFDNKSLS 86 (851)
Q Consensus 25 ~~~~~~~~~~aLl~fk~~~~~~~~~l~sW~~~~----~~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~ 86 (851)
.+.+..+|++||++||+++.+| +|+.+. .+| |.| .||+|+. ++||++|+|++++++
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred ccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 3456678999999999999877 887653 356 999 9999987 689999999999999
Q ss_pred eecCccccCCccCcEEeC-CCCcccCccCcccccC----CC-----CceE------ec-ccCccc-----------CCCC
Q 003065 87 GEISSSISALQSLTVLSL-PFNVLSGKLPLELSNC----SN-----LKVL------NV-TGNAMV-----------GSVP 138 (851)
Q Consensus 87 g~i~~~l~~l~~L~~L~L-~~n~l~~~~p~~~~~l----~~-----L~~L------~L-s~n~l~-----------~~~~ 138 (851)
|.+|++|++|++|++|+| ++|.++|..|-.-... +. ++.. +. ....+. ...+
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 8999988754321111 00 0000 00 000000 0000
Q ss_pred C-CCCCCCCCeEeccC--cccCCCCcccccCccccceeecccccCCCC----------------CCccccc--CCCCCCe
Q 003065 139 D-LSALKNLEIFDLSI--NYFTGRFPRWVVNLTQLVSLSIGDNVYDEA----------------EIPESIG--NLKNLTY 197 (851)
Q Consensus 139 ~-l~~l~~L~~L~Ls~--N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----------------~~p~~~~--~l~~L~~ 197 (851)
. ......++.+.++. |.+++ +|..|.++++|++|+|++|.++.. .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 0 11222333333333 55555 566666666666666666666510 2666655 6666666
Q ss_pred EecccccccccCCcccccccccCcccccccc-ccc-cccccccCCC-------cccEEEeeccCccCcCCc--CcCCCCc
Q 003065 198 LFLAHCNLRGRIPESISELRELGTLDICRNK-ISG-EFPRSIRKLQ-------KLWKIELYANNLTGELPA--ELGNLTL 266 (851)
Q Consensus 198 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-i~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~ 266 (851)
|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..+.+++ +|++|+|++|+++ .+|. .|+++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 6666666666666666666666666666666 666 5665555444 6666677666666 5666 6666666
Q ss_pred ccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCccc-ccEEEeccCcCCCCCCCccCCCCc--cceee
Q 003065 267 LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK-LFAFSIYGNRFSGPFPENLGRYTA--LTDVD 343 (851)
Q Consensus 267 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~l~~l~~--L~~L~ 343 (851)
|++|+|++|+++ .+| .|.++++|+.|++++|+++ .+|..+..+++ |+.|++++|+++ .+|..+..++. |+.|+
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~ 650 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVD 650 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEE
Confidence 667777666666 555 6666666666777666666 56666666666 667777766666 55666655543 66677
Q ss_pred ccCCcccccCchhh---h--hhcchHHHHhccCCcccccccc-ccCccccceeccccCccccccCCcccCc--------c
Q 003065 344 ISENQFSGSFPKYL---C--EKRKLLNLLALSNNFSGEVPNS-YADCKTIQRLRISDNHLSGKIPDGLWAL--------P 409 (851)
Q Consensus 344 Ls~N~l~~~~p~~~---~--~~~~L~~l~l~~n~~~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~ 409 (851)
|++|++.+.+|... . ..++|+.|++++|++. .+|.. +..+++|++|+|++|+|+ .+|..+... +
T Consensus 651 Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~ 728 (876)
T 4ecn_A 651 FSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTY 728 (876)
T ss_dssp CCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGG
T ss_pred CcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccC
Confidence 77776666554322 1 2235666666666666 34443 457889999999999998 667655442 3
Q ss_pred ccceEEecCCcCCCCCCcccc--cCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEE
Q 003065 410 NVGMLDFGDNDFTGGISPLIG--LSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLH 487 (851)
Q Consensus 410 ~L~~L~Ls~N~l~~~~~~~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 487 (851)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+ +
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ 788 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------D 788 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------C
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------C
Confidence 8999999999999 5566665 89999999999999997 78889999999999998876 5
Q ss_pred ecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccc
Q 003065 488 LEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSG 566 (851)
Q Consensus 488 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~ 566 (851)
+++|++.+.+|..++.+++|+.|+|++|+| +.+|..+. ++|+.|||++|++...-+..+... .+..+.+.+|++..
T Consensus 789 ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp TTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred cccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccc
Confidence 566777777777777777777777777777 56666654 467777777777764444444443 45555666665543
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4e-59 Score=571.17 Aligned_cols=497 Identities=19% Similarity=0.219 Sum_probs=426.1
Q ss_pred cccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCcc-CcccccCCCCceEecccCcccCCCCC
Q 003065 61 CGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKL-PLELSNCSNLKVLNVTGNAMVGSVPD 139 (851)
Q Consensus 61 c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~~~ 139 (851)
|.|..|.+ .+.+++.|||++|.+++..+.+|..+++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+.+..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 57888877 5568999999999999999999999999999999999777777 77899999999999999999998776
Q ss_pred -CCCCCCCCeEeccCcccCCCCccc--ccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccc
Q 003065 140 -LSALKNLEIFDLSINYFTGRFPRW--VVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISEL 216 (851)
Q Consensus 140 -l~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 216 (851)
|+++++|++|+|++|.+++..|.. |.++++|++|+|++|.+.....+..|+++++|++|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 999999999999999999876665 99999999999999999855555789999999999999999999999999988
Q ss_pred --cccCccccccccccccccccccCCCc------ccEEEeeccCccCcCCcCcCC-------------------------
Q 003065 217 --RELGTLDICRNKISGEFPRSIRKLQK------LWKIELYANNLTGELPAELGN------------------------- 263 (851)
Q Consensus 217 --~~L~~L~L~~N~i~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~------------------------- 263 (851)
++|+.|+++.|.+++..|..+..+++ |++|++++|.+++..|..+..
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999988888777766 999999999888766654432
Q ss_pred -------------CCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCC
Q 003065 264 -------------LTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP 330 (851)
Q Consensus 264 -------------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 330 (851)
.++|+.|++++|.+.+..|..|.++++|+.|++++|++++..|..|..+++|++|++++|++++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 2578888888888887778888888888888888888888778888888888888888888888888
Q ss_pred CccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccc
Q 003065 331 ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPN 410 (851)
Q Consensus 331 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 410 (851)
..+..+++|+.|++++|++.+..+..+..+++|+.|++++|.+.+. ..+++|+.|++++|+++ .+|.. ..+
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~ 402 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLT 402 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTT
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccc
Confidence 8888888888888888888877777788888888888888887643 23677888888888887 55543 457
Q ss_pred cceEEecCCcCCCCCC-cccccCCCCCeEecCCCcceeeCCc-ccccCCCCcEEeccCcccc-----CCCccccccCCcc
Q 003065 411 VGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPS-ELGRLTNLERLILTNNNFS-----GKIPSALGALRQL 483 (851)
Q Consensus 411 L~~L~Ls~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L 483 (851)
++.|++++|++++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|
T Consensus 403 l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L 482 (844)
T 3j0a_A 403 ANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHL 482 (844)
T ss_dssp CCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCE
T ss_pred cceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccc
Confidence 8888999998887543 2456789999999999999865543 4566889999999999997 4455678899999
Q ss_pred cEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccccceEEeCcCCc
Q 003065 484 SSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQ 563 (851)
Q Consensus 484 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~L~~l~ls~N~ 563 (851)
+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|..+. .|+.+++++|+
T Consensus 483 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--~L~~l~l~~Np 558 (844)
T 3j0a_A 483 QVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--SLSVLDITHNK 558 (844)
T ss_dssp ECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS--SCCEEEEEEEC
T ss_pred cEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC--CcCEEEecCCC
Confidence 9999999999999999999999999999999999987777766 7899999999999998888765 67889999999
Q ss_pred ccccCCccc
Q 003065 564 LSGSVPLDF 572 (851)
Q Consensus 564 l~~~~p~~~ 572 (851)
|.|.|+..+
T Consensus 559 ~~C~c~~~~ 567 (844)
T 3j0a_A 559 FICECELST 567 (844)
T ss_dssp CCCSSSCCS
T ss_pred cccccccHH
Confidence 999998654
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-57 Score=547.80 Aligned_cols=499 Identities=21% Similarity=0.172 Sum_probs=391.0
Q ss_pred ceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEecc
Q 003065 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLS 152 (851)
Q Consensus 74 ~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls 152 (851)
+++.|+++++.+++..|..++.+++|++|+|++|.+++..+..|+++++|++|+|++|.+++.+|. ++++++|++|||+
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 566777777777777777777777777777777777754444677777777777777777766654 7777777777777
Q ss_pred CcccCCCCcccccCccccceeecccccCCCCCCcccc--cCCCCCCeEecccccccccCCc-------------------
Q 003065 153 INYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESI--GNLKNLTYLFLAHCNLRGRIPE------------------- 211 (851)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p~------------------- 211 (851)
+|.+++..|..+.++++|++|++++|.++ +..|..+ ..+++|++|++++|++++..|.
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQ-ALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCC-CBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCcccccCchhhcccccCCEEEccCCccc-ccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 77777777777777777777777777765 2223332 2345566666666655554444
Q ss_pred --------------------------------ccccccc--cCccccccccccccccccccCCCcccEEEeeccCccCcC
Q 003065 212 --------------------------------SISELRE--LGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGEL 257 (851)
Q Consensus 212 --------------------------------~~~~l~~--L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 257 (851)
.|.+++. |++|++++|++++..|..|..+++|++|++++|++++..
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 288 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLF 288 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEEC
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccC
Confidence 4444433 566666666665555555666666666666666666555
Q ss_pred CcCcCCCCcccEEecccccccC-----CCCc----cccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCC
Q 003065 258 PAELGNLTLLQEFDISSNQMYG-----KLPE----EIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGP 328 (851)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~-----~~p~----~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 328 (851)
|..|.++++|++|++++|...+ .+|. .|..+++|++|++++|++++..+..|.++++|++|++++|.++..
T Consensus 289 ~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ 368 (680)
T 1ziw_A 289 SHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR 368 (680)
T ss_dssp TTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCC
T ss_pred hhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhh
Confidence 5566666666666666554332 2222 567788999999999999998888999999999999999986533
Q ss_pred C--CCccCCC--CccceeeccCCcccccCchhhhhhcchHHHHhccCCcccccc-ccccCccccceeccccCccccccCC
Q 003065 329 F--PENLGRY--TALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVP-NSYADCKTIQRLRISDNHLSGKIPD 403 (851)
Q Consensus 329 ~--p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~ 403 (851)
. +..+..+ ++|+.|++++|++++..|..+..+++|+.+++++|.+.+.+| ..|.++++|++|++++|++++..+.
T Consensus 369 ~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 448 (680)
T 1ziw_A 369 TLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRN 448 (680)
T ss_dssp EECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTT
T ss_pred hcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChh
Confidence 2 2333333 589999999999999999999999999999999999998776 6899999999999999999999999
Q ss_pred cccCccccceEEecCCcCC--CCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCc-------
Q 003065 404 GLWALPNVGMLDFGDNDFT--GGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIP------- 474 (851)
Q Consensus 404 ~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------- 474 (851)
.|..+++|+.|++++|.++ +..|..+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+
T Consensus 449 ~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 528 (680)
T 1ziw_A 449 SFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGP 528 (680)
T ss_dssp TTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSC
T ss_pred hhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCc
Confidence 9999999999999999987 5688899999999999999999998888889999999999999999986532
Q ss_pred -cccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccc-cc
Q 003065 475 -SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLM-KL 552 (851)
Q Consensus 475 -~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~-~l 552 (851)
..|.++++|+.|+|++|+++...+..|+++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..+. .+
T Consensus 529 ~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 608 (680)
T 1ziw_A 529 IYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAF 608 (680)
T ss_dssp CCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHH
T ss_pred chhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccc
Confidence 3488999999999999999965556799999999999999999987777889999999999999999987777776 55
Q ss_pred -cceEEeCcCCcccccCCc-ccc
Q 003065 553 -KLSSIDLSENQLSGSVPL-DFL 573 (851)
Q Consensus 553 -~L~~l~ls~N~l~~~~p~-~~~ 573 (851)
.|+.+++++|+|.|.++. .|.
T Consensus 609 ~~L~~l~l~~N~~~c~c~~~~~~ 631 (680)
T 1ziw_A 609 RNLTELDMRFNPFDCTCESIAWF 631 (680)
T ss_dssp TTCSEEECTTCCCCBCCCCCSSE
T ss_pred cccCEEEccCCCcccCCccHHHH
Confidence 899999999999999985 443
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.2e-58 Score=541.14 Aligned_cols=506 Identities=19% Similarity=0.178 Sum_probs=450.4
Q ss_pred EEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcc
Q 003065 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINY 155 (851)
Q Consensus 77 ~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~ 155 (851)
.++.++.+++ .+|..+.. ++++|+|++|.+++..|..|+++++|++|+|++|++.+..|. |+++++|++|+|++|.
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5788888887 67777764 799999999999988899999999999999999999998776 9999999999999999
Q ss_pred cCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccc
Q 003065 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPR 235 (851)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~ 235 (851)
+++..|..|.++++|++|++++|.+. ...|..++++++|++|++++|++++..+..+..+++|++|++++|++++..|.
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred ccccChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChh
Confidence 99999999999999999999999998 22367799999999999999999975545555699999999999999988899
Q ss_pred cccCCCccc--EEEeeccCccCcCCcCcCCCCcccEEeccccccc--------------------------CCCCccccC
Q 003065 236 SIRKLQKLW--KIELYANNLTGELPAELGNLTLLQEFDISSNQMY--------------------------GKLPEEIGN 287 (851)
Q Consensus 236 ~~~~l~~L~--~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--------------------------~~~p~~l~~ 287 (851)
.|..+++|+ .|++++|.+++..|..+. ..+|+.|++++|... ...+..+..
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 999999999 999999999988777765 478999999987510 111223333
Q ss_pred cC--CccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHH
Q 003065 288 LK--NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLN 365 (851)
Q Consensus 288 l~--~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~ 365 (851)
+. +|+.|++++|++++..+..|+.+++|++|++++|+++ .+|..+..+++|++|++++|++.+..|..+..+++|++
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 33 7999999999999888888999999999999999999 78889999999999999999999888999999999999
Q ss_pred HHhccCCcccccccc-ccCccccceeccccCcccccc--CCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCC
Q 003065 366 LLALSNNFSGEVPNS-YADCKTIQRLRISDNHLSGKI--PDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQN 442 (851)
Q Consensus 366 l~l~~n~~~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~ 442 (851)
+++.+|.+.+.+|.. +..+++|++|++++|++++.. |..+..+++|++|++++|++++..+..+..+++|+.|++++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 999999999877654 999999999999999999776 78899999999999999999999999999999999999999
Q ss_pred CcceeeCCcc-cccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCC---CCCCcccccccceeeccCcccc
Q 003065 443 NRFSGELPSE-LGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGS---IPNEMGDCARIVDLNLARNSLS 518 (851)
Q Consensus 443 N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~ 518 (851)
|++++..|.. +..+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..++.+++|+.|++++|+++
T Consensus 410 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~ 489 (606)
T 3t6q_A 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS 489 (606)
T ss_dssp CCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCC
T ss_pred CcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccC
Confidence 9999877654 89999999999999999999999999999999999999999873 3467999999999999999999
Q ss_pred cccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccccCCC--CccccCCCCCCC
Q 003065 519 GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMGG--DGAFAGNEGLCL 589 (851)
Q Consensus 519 ~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~~--~~~~~gn~~lc~ 589 (851)
+.+|..|..+++|+.|+|++|++++.+|..+..+ .| .||+++|++++.+|..+..... .-...+||..|.
T Consensus 490 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 490 SIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred ccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 9999999999999999999999999999999998 88 9999999999887765443222 344578887774
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-56 Score=530.23 Aligned_cols=501 Identities=20% Similarity=0.174 Sum_probs=445.6
Q ss_pred EEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCc
Q 003065 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSIN 154 (851)
Q Consensus 76 ~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N 154 (851)
+.++.++++++ .+|..+. +++++|+|++|.+++..|..|+++++|++|+|++|.+++.+|. |+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 36899999998 6787665 8999999999999988888999999999999999999998776 999999999999999
Q ss_pred ccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccc-cCCcccccccccCccccccccccccc
Q 003065 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEF 233 (851)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~i~~~~ 233 (851)
.+++..|..|.++++|++|++++|.+. ...|..++++++|++|++++|++++ .+|..|+++++|++|++++|++++..
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred cccccChhhcCCcccCCEEEccCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 999999999999999999999999997 3334779999999999999999986 57999999999999999999999988
Q ss_pred cccccCCCccc----EEEeeccCccCcCCcCcCCCCcccEEeccccccc-CCCCccccCcCCccEEEc------------
Q 003065 234 PRSIRKLQKLW----KIELYANNLTGELPAELGNLTLLQEFDISSNQMY-GKLPEEIGNLKNLTVFQC------------ 296 (851)
Q Consensus 234 p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l------------ 296 (851)
|..|..+++|+ +|++++|.+++..+..+... +|++|++++|.+. +.+|..+.++++|+.+++
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~ 248 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc
Confidence 88888887765 89999999997666666554 9999999999986 355667777777777666
Q ss_pred ---------------------cCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCch
Q 003065 297 ---------------------FKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPK 355 (851)
Q Consensus 297 ---------------------~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 355 (851)
..|.+++.+|. +..+++|+.|++++|.+. .+| .+..+++|++|++++|++ +.+|.
T Consensus 249 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~ 324 (606)
T 3vq2_A 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPT 324 (606)
T ss_dssp CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCC
T ss_pred ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-ccccc
Confidence 66777777776 899999999999999997 456 889999999999999999 68884
Q ss_pred hhhhhcchHHHHhccCCccccccccccCccccceeccccCccccc--cCCcccCccccceEEecCCcCCCCCCcccccCC
Q 003065 356 YLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGK--IPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (851)
Q Consensus 356 ~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 433 (851)
. .+++|+++++.+|...+.+ .+..+++|++|++++|++++. +|..+..+++|++|++++|++++.+ ..+..++
T Consensus 325 ~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~l~ 399 (606)
T 3vq2_A 325 L--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMS-ANFMGLE 399 (606)
T ss_dssp C--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEEC-CCCTTCT
T ss_pred C--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccch-hhccCCC
Confidence 4 8999999999999766655 678999999999999999976 3888999999999999999998744 7888999
Q ss_pred CCCeEecCCCcceeeCC-cccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccC-CCCCCcccccccceee
Q 003065 434 SLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTG-SIPNEMGDCARIVDLN 511 (851)
Q Consensus 434 ~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 511 (851)
+|+.|++++|++++..| ..+..+++|++|++++|.+++..|..+..+++|++|+|++|++++ .+|..++.+++|+.|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 99999999999998887 689999999999999999999999999999999999999999998 4899999999999999
Q ss_pred ccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccccCC--C-CccccCCCCC
Q 003065 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMG--G-DGAFAGNEGL 587 (851)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~--~-~~~~~gn~~l 587 (851)
|++|++++.+|..+..+++|+.|+|++|++++.+|..+..+ .|+.||+++|+++ .+|..+.... . .-...+|+..
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVA 558 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCC
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcc
Confidence 99999999999999999999999999999999889999998 8999999999999 6776644332 1 2346889988
Q ss_pred CCCc
Q 003065 588 CLDQ 591 (851)
Q Consensus 588 c~~~ 591 (851)
|..+
T Consensus 559 c~c~ 562 (606)
T 3vq2_A 559 CICE 562 (606)
T ss_dssp CSST
T ss_pred cCCc
Confidence 8654
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-56 Score=542.15 Aligned_cols=498 Identities=21% Similarity=0.210 Sum_probs=419.9
Q ss_pred EEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCC-CC-CCCCCCCCeEeccCc
Q 003065 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSV-PD-LSALKNLEIFDLSIN 154 (851)
Q Consensus 77 ~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-~~-l~~l~~L~~L~Ls~N 154 (851)
.+|.++++++ .+|. ..++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |. |+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3455667777 4665 5689999999999999888999999999999999999776654 44 999999999999999
Q ss_pred ccCCCCcccccCccccceeecccccCCCCCCccc--ccCCCCCCeEecccccccccCC-cccccccccCccccccccccc
Q 003065 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPES--IGNLKNLTYLFLAHCNLRGRIP-ESISELRELGTLDICRNKISG 231 (851)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~i~~ 231 (851)
.+.+..|.+|.++++|++|+|++|.+. +.+|.. ++++++|++|+|++|.+++..+ ..|+++++|++|+|++|++++
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLS-DAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCS-SCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCC-cccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 999999999999999999999999998 445554 8999999999999999997765 579999999999999999999
Q ss_pred cccccccCC--CcccEEEeeccCccCcCCcCcCCCCc------ccEEecccccccCCCCccccCc---------------
Q 003065 232 EFPRSIRKL--QKLWKIELYANNLTGELPAELGNLTL------LQEFDISSNQMYGKLPEEIGNL--------------- 288 (851)
Q Consensus 232 ~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~l~~l--------------- 288 (851)
..+..+..+ ++|+.|+++.|.+.+..|..++.+++ |++|++++|++++..|..+...
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 999999888 89999999999999999888877776 9999999999887776655432
Q ss_pred -----------------------CCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeecc
Q 003065 289 -----------------------KNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDIS 345 (851)
Q Consensus 289 -----------------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls 345 (851)
++|+.|++++|.+.+..|..|..+++|+.|++++|++++..|..|..+++|+.|+|+
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 322 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS 322 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEE
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECC
Confidence 578888888888887777788888888888888888888878888888888888888
Q ss_pred CCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCC
Q 003065 346 ENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGI 425 (851)
Q Consensus 346 ~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 425 (851)
+|++++..|..+..+++|+.|++.+|++.+..+..|..+++|++|+|++|.+++ ++ .+++|+.|++++|+++..+
T Consensus 323 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~~l~ 397 (844)
T 3j0a_A 323 YNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLVTLP 397 (844)
T ss_dssp SCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCCCCC
T ss_pred CCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCccccc
Confidence 888887778888888888888888888887777788888888888888888873 22 2778888888888887543
Q ss_pred CcccccCCCCCeEecCCCcceeeC-CcccccCCCCcEEeccCccccCCCcc-ccccCCcccEEEecCCccc-----CCCC
Q 003065 426 SPLIGLSTSLSQLVLQNNRFSGEL-PSELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALT-----GSIP 498 (851)
Q Consensus 426 ~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p 498 (851)
. . ..+++.|++++|++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..|
T Consensus 398 ~-~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 473 (844)
T 3j0a_A 398 K-I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473 (844)
T ss_dssp C-C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCS
T ss_pred c-c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccch
Confidence 2 2 467888999999988542 23456899999999999999976554 5667899999999999997 4556
Q ss_pred CCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccccceEEeCcCCcccccCCcccccCCCC
Q 003065 499 NEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVPLDFLRMGGD 578 (851)
Q Consensus 499 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~L~~l~ls~N~l~~~~p~~~~~~~~~ 578 (851)
..|..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. -.|+.||+++|++++.+|..+.... .
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~~~~L~-~ 551 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDVFVSLS-V 551 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCCCSSCC-E
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhHhCCcC-E
Confidence 7799999999999999999999999999999999999999999976665554 5799999999999999997654222 3
Q ss_pred ccccCCCCCCCC
Q 003065 579 GAFAGNEGLCLD 590 (851)
Q Consensus 579 ~~~~gn~~lc~~ 590 (851)
-.+.+||..|..
T Consensus 552 l~l~~Np~~C~c 563 (844)
T 3j0a_A 552 LDITHNKFICEC 563 (844)
T ss_dssp EEEEEECCCCSS
T ss_pred EEecCCCccccc
Confidence 456889888853
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-54 Score=505.00 Aligned_cols=510 Identities=19% Similarity=0.177 Sum_probs=418.7
Q ss_pred CCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEe
Q 003065 72 TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFD 150 (851)
Q Consensus 72 ~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 150 (851)
..+++.|+++++.+++..+.++..+++|++|+|++|++++..|..|+++++|++|+|++|.+++.+|. |+++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 34688899999999887778899999999999999999877778889999999999999998887765 88899999999
Q ss_pred ccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccccccc----Ccccccc
Q 003065 151 LSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL----GTLDICR 226 (851)
Q Consensus 151 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L----~~L~L~~ 226 (851)
+++|.+++..+..+.++++|++|++++|.+....+|..++++++|++|++++|++++..|..++.+++| ++|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 999998876666788999999999999988755678889999999999999999988878888888888 7889999
Q ss_pred ccccccccccccCCCcccEEEeeccCccC-cCCcCcCCCCcccEEeccccccc------CCCCccccCcC--CccEEEcc
Q 003065 227 NKISGEFPRSIRKLQKLWKIELYANNLTG-ELPAELGNLTLLQEFDISSNQMY------GKLPEEIGNLK--NLTVFQCF 297 (851)
Q Consensus 227 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~------~~~p~~l~~l~--~L~~L~l~ 297 (851)
|.+++..|..|..+ +|++|++++|.... .++..+..+++++.+++..+.+. ......+..++ .++.++++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99988777777766 79999998885431 33445556666666655433222 11122233333 25666777
Q ss_pred CC-ccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCcccc
Q 003065 298 KN-NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGE 376 (851)
Q Consensus 298 ~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~ 376 (851)
+| .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.+.+.+|.+.+.
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNA 340 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCccccc
Confidence 77 777777888888888888888888887 577777777 8888888888887 5665 3567788888888887776
Q ss_pred ccccccCccccceeccccCcccccc--CCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCC-ccc
Q 003065 377 VPNSYADCKTIQRLRISDNHLSGKI--PDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELP-SEL 453 (851)
Q Consensus 377 ~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~ 453 (851)
.+. ..+++|++|++++|++++.. |..+..+++|++|++++|++++.++. +..+++|+.|++++|++++..| ..+
T Consensus 341 ~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~ 417 (570)
T 2z63_A 341 FSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVF 417 (570)
T ss_dssp CCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTT
T ss_pred ccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhh
Confidence 665 78899999999999998664 77888999999999999999987666 8899999999999999998766 578
Q ss_pred ccCCCCcEEeccCccccCCCccccccCCcccEEEecCCccc-CCCCCCcccccccceeeccCcccccccCCCccccccCC
Q 003065 454 GRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT-GSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLN 532 (851)
Q Consensus 454 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 532 (851)
..+++|++|++++|.+++..|..+.++++|+.|+|++|+++ +.+|..++.+++|+.|++++|++++..|.++..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 99999999999999999999999999999999999999998 68999999999999999999999999999999999999
Q ss_pred eEeCCCCccccccCcccccc-cceEEeCcCCcccccCCccccc-CCC---CccccCCCCCCCCc
Q 003065 533 ALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLR-MGG---DGAFAGNEGLCLDQ 591 (851)
Q Consensus 533 ~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~-~~~---~~~~~gn~~lc~~~ 591 (851)
.|+|++|++++..|..+..+ .|+.|++++|+++|.+|..+.. ... ...+.+.+ .|..|
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 99999999998878888888 8999999999999999965432 111 23344444 66654
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.7e-54 Score=504.74 Aligned_cols=486 Identities=19% Similarity=0.238 Sum_probs=397.8
Q ss_pred CcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC
Q 003065 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD 139 (851)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~ 139 (851)
.|.|.|| ||.. +++++ .+|+.+. ++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.
T Consensus 3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999999 9643 34454 5666654 7899999999999887888899999999999999999888765
Q ss_pred -CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCC-ccccccc
Q 003065 140 -LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP-ESISELR 217 (851)
Q Consensus 140 -l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~ 217 (851)
++++++|++|||++|.+++..|.+|.++++|++|++++|.+....+|..++++++|++|++++|++.+.+| ..|.+++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 88999999999999999988888889999999999999998755667788899999999999998444444 6788999
Q ss_pred ccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCC--C-ccccCcCCccEE
Q 003065 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKL--P-EEIGNLKNLTVF 294 (851)
Q Consensus 218 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p-~~l~~l~~L~~L 294 (851)
+|++|++++|++++..|..+..+++|++|+++.|.+....+..+..+++|++|++++|++++.. | .....+++|+.|
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L 228 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKL 228 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccce
Confidence 9999999999999888889999999999999999887433333456889999999999988642 2 223457888999
Q ss_pred EccCCccCCCCC----CCCCCcccccEEEeccCcCCCCC------CCccCCCCccceeeccCCccccc-----Cchhhhh
Q 003065 295 QCFKNNFSGEFP----SGFGDMRKLFAFSIYGNRFSGPF------PENLGRYTALTDVDISENQFSGS-----FPKYLCE 359 (851)
Q Consensus 295 ~l~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~-----~p~~~~~ 359 (851)
++++|.+++..+ ..+..+++|+.+++++|.+.+.. ...+..+.+|+.|+++++.+... ++..+..
T Consensus 229 ~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~ 308 (549)
T 2z81_A 229 AFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSL 308 (549)
T ss_dssp EEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHH
T ss_pred eccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhh
Confidence 999998875433 33466788899999998877532 23456678888899888876532 2333445
Q ss_pred hcchHHHHhccCCccccccccc-cCccccceeccccCccccccC---CcccCccccceEEecCCcCCCCCC--cccccCC
Q 003065 360 KRKLLNLLALSNNFSGEVPNSY-ADCKTIQRLRISDNHLSGKIP---DGLWALPNVGMLDFGDNDFTGGIS--PLIGLST 433 (851)
Q Consensus 360 ~~~L~~l~l~~n~~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~ 433 (851)
..+++.+++.+|.+. .+|..+ ..+++|++|+|++|++++.+| ..+..+++|++|++++|++++..+ ..+..++
T Consensus 309 ~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~ 387 (549)
T 2z81_A 309 LEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK 387 (549)
T ss_dssp STTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT
T ss_pred cccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCC
Confidence 567888888888875 666665 579999999999999998774 457889999999999999997654 5688999
Q ss_pred CCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeecc
Q 003065 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (851)
Q Consensus 434 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (851)
+|++|+|++|+++ .+|..+..+++|++|++++|++++ +|..+. ++|++|+|++|++++.+ +.+++|+.|+|+
T Consensus 388 ~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 388 NLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp TCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred CCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 9999999999999 788899999999999999999984 444432 58999999999998753 578999999999
Q ss_pred CcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCc
Q 003065 514 RNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPL 570 (851)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~ 570 (851)
+|+|+ .+|. ...+++|+.|+|++|++++.+|..+..+ .|+.||+++|+|.|.+|.
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99999 6776 5789999999999999998888889888 899999999999999994
No 15
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-52 Score=484.63 Aligned_cols=459 Identities=21% Similarity=0.254 Sum_probs=386.6
Q ss_pred EEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCc
Q 003065 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSIN 154 (851)
Q Consensus 76 ~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N 154 (851)
+.+|+++++++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|. ++++++|++|||++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 36899999999 5888777 8999999999999987778999999999999999999988765 899999999999999
Q ss_pred ccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccccccc--Cccccccccc--c
Q 003065 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL--GTLDICRNKI--S 230 (851)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~i--~ 230 (851)
+++ .+|.. .+++|++|+|++|.+....+|..++++++|++|++++|++++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56665 899999999999999855788999999999999999999986 457777777 9999999999 7
Q ss_pred ccccccccCCC-cccEEEeeccCccCcCCc-CcCCCCcccEEeccccc-------ccCCCCccccCcCCccEEEccCCcc
Q 003065 231 GEFPRSIRKLQ-KLWKIELYANNLTGELPA-ELGNLTLLQEFDISSNQ-------MYGKLPEEIGNLKNLTVFQCFKNNF 301 (851)
Q Consensus 231 ~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~~~~p~~l~~l~~L~~L~l~~N~l 301 (851)
+..|..+..+. +...+++++|++.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88888888776 455678888988876654 67789999999999997 666665 788899999999999888
Q ss_pred CCCCCCCCC---CcccccEEEeccCcCCCCCCCcc-----CCCCccceeeccCCcccccCc-hhhhhhcchHHHHhccCC
Q 003065 302 SGEFPSGFG---DMRKLFAFSIYGNRFSGPFPENL-----GRYTALTDVDISENQFSGSFP-KYLCEKRKLLNLLALSNN 372 (851)
Q Consensus 302 ~~~~p~~~~---~l~~L~~L~l~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~L~~l~l~~n~ 372 (851)
++..+..+. ..++|++|++++|+++|.+|..+ +.+++|+.+++++|.+ .+| .+++..
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~------------ 298 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEI------------ 298 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHH------------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcc------------
Confidence 753222111 13588999999999998888888 8889999999999888 455 333322
Q ss_pred ccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCccee--eCC
Q 003065 373 FSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSG--ELP 450 (851)
Q Consensus 373 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~--~~p 450 (851)
....+|+.|++++|++.+.. .+..+++|++|++++|++++.+|..+..+++|++|+|++|++++ .+|
T Consensus 299 ---------~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 367 (520)
T 2z7x_B 299 ---------FSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA 367 (520)
T ss_dssp ---------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHH
T ss_pred ---------cccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccch
Confidence 01146889999999886432 12578899999999999999889999999999999999999986 567
Q ss_pred cccccCCCCcEEeccCccccCCCcc-ccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccc
Q 003065 451 SELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLS 529 (851)
Q Consensus 451 ~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (851)
..+..+++|++|++++|.+++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|++++|+++ .+|..+..++
T Consensus 368 ~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~ 444 (520)
T 2z7x_B 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE 444 (520)
T ss_dssp HHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred HHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC
Confidence 8899999999999999999985654 588999999999999999988887775 78999999999999 8898888999
Q ss_pred cCCeEeCCCCccccccCcc-cccc-cceEEeCcCCcccccCCcccc
Q 003065 530 SLNALNLSGNKLTGSIPDN-LMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 530 ~L~~L~Ls~N~l~g~ip~~-l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
+|+.|+|++|+++ .+|.. +..+ .|+.|++++|+++|.++..|.
T Consensus 445 ~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 489 (520)
T 2z7x_B 445 ALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 489 (520)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred CCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCchHH
Confidence 9999999999999 67776 7777 899999999999999986544
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=473.90 Aligned_cols=500 Identities=20% Similarity=0.214 Sum_probs=429.3
Q ss_pred EecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCccc
Q 003065 78 ISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYF 156 (851)
Q Consensus 78 l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l 156 (851)
++.++.+++ .+|..+. +++++|+|++|++++..+..|+++++|++|+|++|++++.++. |+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 444445555 4666553 5799999999999988888999999999999999999998776 89999999999999999
Q ss_pred CCCCcccccCccccceeecccccCCCCCCcc-cccCCCCCCeEecccccccc-cCCcccccccccCcccccccccccccc
Q 003065 157 TGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE-SIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEFP 234 (851)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~-~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~i~~~~p 234 (851)
++..|..|.++++|++|++++|.+. .+|. .++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLA--SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCC--CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred CccCHhhhcCccccccccccccccc--cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 9888899999999999999999997 4444 69999999999999999987 479999999999999999999998888
Q ss_pred ccccCCCcc----cEEEeeccCccCcCCcCcCCCCcccEEecccccccC-CCCccccCcCCccEEEccCCccC------C
Q 003065 235 RSIRKLQKL----WKIELYANNLTGELPAELGNLTLLQEFDISSNQMYG-KLPEEIGNLKNLTVFQCFKNNFS------G 303 (851)
Q Consensus 235 ~~~~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~------~ 303 (851)
..+..+++| +.|++++|.+++..|..+... +|+.|++++|.... .++..+..+++++.+.+..+.+. .
T Consensus 167 ~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~ 245 (570)
T 2z63_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245 (570)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEE
T ss_pred HHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhh
Confidence 899999998 899999999998888888766 89999999986542 34566778888888776544332 1
Q ss_pred CCCCCCCCcc--cccEEEeccC-cCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCcccccccc
Q 003065 304 EFPSGFGDMR--KLFAFSIYGN-RFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNS 380 (851)
Q Consensus 304 ~~p~~~~~l~--~L~~L~l~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~ 380 (851)
.....+..+. .++.+++++| .+.+..|..+..+++|+.|++++|.++ .+|.++... +|+++++.+|.+. .+|.
T Consensus 246 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~- 321 (570)
T 2z63_A 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT- 321 (570)
T ss_dssp CCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB-
T ss_pred cchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc-
Confidence 2223444444 3567788888 788899999999999999999999998 688888888 9999999999988 5565
Q ss_pred ccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCC--CcccccCCCCCeEecCCCcceeeCCcccccCCC
Q 003065 381 YADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGI--SPLIGLSTSLSQLVLQNNRFSGELPSELGRLTN 458 (851)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 458 (851)
..+++|++|++++|.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|.+++..+. +..+++
T Consensus 322 -~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~ 397 (570)
T 2z63_A 322 -LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQ 397 (570)
T ss_dssp -CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTT
T ss_pred -ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCC
Confidence 5788999999999999877766 68999999999999998765 67788999999999999999966555 999999
Q ss_pred CcEEeccCccccCCCc-cccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccc-cccCCCccccccCCeEeC
Q 003065 459 LERLILTNNNFSGKIP-SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLS-GNIPRSLSLLSSLNALNL 536 (851)
Q Consensus 459 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L 536 (851)
|++|++++|.+++..| ..+..+++|++|+|++|++++..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+|
T Consensus 398 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 477 (570)
T 2z63_A 398 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477 (570)
T ss_dssp CCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEEC
Confidence 9999999999998776 57899999999999999999999999999999999999999998 689999999999999999
Q ss_pred CCCccccccCcccccc-cceEEeCcCCcccccCCcccccCCC--CccccCCCCCCCCc
Q 003065 537 SGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMGG--DGAFAGNEGLCLDQ 591 (851)
Q Consensus 537 s~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~~--~~~~~gn~~lc~~~ 591 (851)
++|++++..|..+..+ .|+.|++++|++++..|..+..... .-...+|+..|..+
T Consensus 478 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 478 SQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999998889999998 9999999999999987765543332 23457777766543
No 17
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.4e-51 Score=489.21 Aligned_cols=442 Identities=18% Similarity=0.272 Sum_probs=346.6
Q ss_pred ccCcEEeCCCCcccCccCcccccCCCCceEec-ccCcccCCCCCC-CCC-CCCCe---Eecc------------CcccCC
Q 003065 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNV-TGNAMVGSVPDL-SAL-KNLEI---FDLS------------INYFTG 158 (851)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~~~l-~~l-~~L~~---L~Ls------------~N~l~~ 158 (851)
.+++.|+|++|+++|.+|++|++|++|++|+| ++|.++|..+.- ... ..+.. ..+. ...+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 999998874421 111 00000 0000 000110
Q ss_pred -----------CCcccccCccccceeeccc--ccCCCCCCcccccCCCCCCeEecccccccc-----------------c
Q 003065 159 -----------RFPRWVVNLTQLVSLSIGD--NVYDEAEIPESIGNLKNLTYLFLAHCNLRG-----------------R 208 (851)
Q Consensus 159 -----------~~~~~~~~l~~L~~L~L~~--N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~ 208 (851)
..+........++.+.++. |.++ + +|..++++++|++|+|++|++++ .
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~-~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~ 480 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRIT-F-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQY 480 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEE-E-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCccc-c-hhHHHhcCCCCCEEECcCCcCCCCccccccccccccccccc
Confidence 1111112334455555554 8887 3 89999999999999999999998 3
Q ss_pred CCcccc--cccccCccccccccccccccccccCCCcccEEEeeccC-ccC-cCCcCcCCCC-------cccEEecccccc
Q 003065 209 IPESIS--ELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN-LTG-ELPAELGNLT-------LLQEFDISSNQM 277 (851)
Q Consensus 209 ~p~~~~--~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l 277 (851)
+|+.++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 899988 99999999999999999999999999999999999998 998 7888666665 999999999999
Q ss_pred cCCCCc--cccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCc-cceeeccCCcccccCc
Q 003065 278 YGKLPE--EIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTA-LTDVDISENQFSGSFP 354 (851)
Q Consensus 278 ~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p 354 (851)
+ .+|. .+.++++|+.|++++|+++ .+| .|+.+++|+.|++++|+++ .+|..+..+++ |+.|+|++|+++ .+|
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCC
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCc
Confidence 9 8888 9999999999999999999 888 8999999999999999999 89999999999 999999999998 555
Q ss_pred hhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcc---c--CccccceEEecCCcCCCCCCccc
Q 003065 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGL---W--ALPNVGMLDFGDNDFTGGISPLI 429 (851)
Q Consensus 355 ~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~ 429 (851)
..+.... .++|+.|+|++|++++.+|... . .+++|+.|+|++|+++..++..+
T Consensus 636 ~~~~~~~----------------------~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~ 693 (876)
T 4ecn_A 636 NIFNAKS----------------------VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELF 693 (876)
T ss_dssp SCCCTTC----------------------SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHH
T ss_pred hhhhccc----------------------cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHH
Confidence 4432221 1237777777777776655322 1 23477777777777775555555
Q ss_pred ccCCCCCeEecCCCcceeeCCcccccC--------CCCcEEeccCccccCCCccccc--cCCcccEEEecCCcccCCCCC
Q 003065 430 GLSTSLSQLVLQNNRFSGELPSELGRL--------TNLERLILTNNNFSGKIPSALG--ALRQLSSLHLEENALTGSIPN 499 (851)
Q Consensus 430 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~ 499 (851)
..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|.
T Consensus 694 ~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~ 770 (876)
T 4ecn_A 694 ATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPT 770 (876)
T ss_dssp HTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCC
T ss_pred ccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cch
Confidence 56777778888877777 555544332 27888888888887 5666665 77888888888888876 677
Q ss_pred CcccccccceeeccC------cccccccCCCccccccCCeEeCCCCccccccCcccccccceEEeCcCCcccccCCccc
Q 003065 500 EMGDCARIVDLNLAR------NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVPLDF 572 (851)
Q Consensus 500 ~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~L~~l~ls~N~l~~~~p~~~ 572 (851)
.++.+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|..+.. .|+.|||++|++...-+..+
T Consensus 771 ~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~-~L~~LdLs~N~l~~i~~~~~ 847 (876)
T 4ecn_A 771 QPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTP-QLYILDIADNPNISIDVTSV 847 (876)
T ss_dssp GGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCS-SSCEEECCSCTTCEEECGGG
T ss_pred hhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcC-CCCEEECCCCCCCccChHHc
Confidence 777888888888765 889999999999999999999999999 699998664 89999999999876555443
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.5e-50 Score=473.19 Aligned_cols=474 Identities=18% Similarity=0.168 Sum_probs=406.0
Q ss_pred cccceeEecC--CCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCC
Q 003065 61 CGFSGITCDS--VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP 138 (851)
Q Consensus 61 c~w~gv~c~~--~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 138 (851)
|++.+++.-+ ...+++.|+++++.+++..|.+++.+++|++|+|++|++++..|.+|+++++|++|+|++|++++.++
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 5666665532 23589999999999999889999999999999999999998888999999999999999999999988
Q ss_pred C-CCCCCCCCeEeccCcccCC-CCcccccCccccceeecccccCCCCCCc-ccccCCCCCCeEecccccccccCCccccc
Q 003065 139 D-LSALKNLEIFDLSINYFTG-RFPRWVVNLTQLVSLSIGDNVYDEAEIP-ESIGNLKNLTYLFLAHCNLRGRIPESISE 215 (851)
Q Consensus 139 ~-l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 215 (851)
. ++++++|++|+|++|.+++ ..|..+.++++|++|++++|.+. +.+| ..+.++++|++|++++|++++.+|..+..
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETF-SEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC-CEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccc-cccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 7 9999999999999999987 46788999999999999999854 3555 57999999999999999999999999999
Q ss_pred ccccCccccccccccccccccccCCCcccEEEeeccCccCcC--C-cCcCCCCcccEEecccccccCCCCc----cccCc
Q 003065 216 LRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGEL--P-AELGNLTLLQEFDISSNQMYGKLPE----EIGNL 288 (851)
Q Consensus 216 l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L~~L~Ls~N~l~~~~p~----~l~~l 288 (851)
+++|++|+++.|.+....+..+..+++|++|++++|++++.. | .....+++|+.|++++|++++..+. .+..+
T Consensus 171 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~ 250 (549)
T 2z81_A 171 IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYI 250 (549)
T ss_dssp CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGC
T ss_pred cccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhh
Confidence 999999999999997443334567999999999999999742 2 2335688999999999999865544 34667
Q ss_pred CCccEEEccCCccCCCC------CCCCCCcccccEEEeccCcCCCC-----CCCccCCCCccceeeccCCcccccCchhh
Q 003065 289 KNLTVFQCFKNNFSGEF------PSGFGDMRKLFAFSIYGNRFSGP-----FPENLGRYTALTDVDISENQFSGSFPKYL 357 (851)
Q Consensus 289 ~~L~~L~l~~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~~-----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 357 (851)
++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+... ++..+....+|+.|++++|++. .+|..+
T Consensus 251 ~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~ 329 (549)
T 2z81_A 251 LELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSF 329 (549)
T ss_dssp TTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHH
T ss_pred ccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHH
Confidence 89999999999987642 23457788999999999987632 1222344578999999999997 788877
Q ss_pred -hhhcchHHHHhccCCcccccc---ccccCccccceeccccCccccccC--CcccCccccceEEecCCcCCCCCCccccc
Q 003065 358 -CEKRKLLNLLALSNNFSGEVP---NSYADCKTIQRLRISDNHLSGKIP--DGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (851)
Q Consensus 358 -~~~~~L~~l~l~~n~~~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 431 (851)
..+++|++|++++|++.+.+| ..++.+++|++|+|++|++++..+ ..+..+++|++|++++|+++ .+|..+..
T Consensus 330 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 408 (549)
T 2z81_A 330 SQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408 (549)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCC
T ss_pred HhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcc
Confidence 479999999999999999875 347889999999999999986543 56888999999999999999 46677888
Q ss_pred CCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceee
Q 003065 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (851)
Q Consensus 432 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (851)
+++|++|++++|+++ .+|..+ .++|++|++++|++++.+ ..+++|++|+|++|+|+ .+|. .+.+++|+.|+
T Consensus 409 ~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~ 479 (549)
T 2z81_A 409 PEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMK 479 (549)
T ss_dssp CTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEE
T ss_pred cccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEe
Confidence 999999999999998 455444 268999999999999753 57899999999999998 6776 57899999999
Q ss_pred ccCcccccccCCCccccccCCeEeCCCCccccccC
Q 003065 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (851)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip 546 (851)
|++|++++.+|..+..+++|+.|+|++|++++..|
T Consensus 480 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 480 ISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999999999999999999999999999999887
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-51 Score=472.72 Aligned_cols=435 Identities=19% Similarity=0.204 Sum_probs=379.9
Q ss_pred CceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEecc
Q 003065 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLS 152 (851)
Q Consensus 73 ~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls 152 (851)
.+++.|+++++.+++..|..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++.++. .+++|++|||+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEecc
Confidence 5899999999999988888999999999999999999988899999999999999999999975555 89999999999
Q ss_pred CcccCC-CCcccccCccccceeecccccCCCCCCcccccCCCCC--CeEecccccc--cccCCccccccc-ccCcccccc
Q 003065 153 INYFTG-RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNL--TYLFLAHCNL--RGRIPESISELR-ELGTLDICR 226 (851)
Q Consensus 153 ~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~p~~~~~l~-~L~~L~L~~ 226 (851)
+|.+++ .+|..|.++++|++|++++|.+.. ..+..+++| ++|++++|++ .+..|..+..+. +...+++++
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred CCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 999997 578999999999999999999973 457778888 9999999999 888898888776 345678899
Q ss_pred ccccccccc-cccCCCcccEEEeeccC-------ccCcCCcCcCCCCcccEEecccccccCCCCcccc---CcCCccEEE
Q 003065 227 NKISGEFPR-SIRKLQKLWKIELYANN-------LTGELPAELGNLTLLQEFDISSNQMYGKLPEEIG---NLKNLTVFQ 295 (851)
Q Consensus 227 N~i~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~ 295 (851)
|++.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+++..+..+. ..++|++|+
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~ 253 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFS 253 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEE
T ss_pred Ccchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEE
Confidence 998876664 68899999999999998 777666 788999999999999998764433322 246899999
Q ss_pred ccCCccCCCCCCCC-----CCcccccEEEeccCcCCCCCC-CccCCC---CccceeeccCCcccccCchhhhhhcchHHH
Q 003065 296 CFKNNFSGEFPSGF-----GDMRKLFAFSIYGNRFSGPFP-ENLGRY---TALTDVDISENQFSGSFPKYLCEKRKLLNL 366 (851)
Q Consensus 296 l~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~p-~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l 366 (851)
+++|+++|.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+..
T Consensus 254 l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~------------- 318 (520)
T 2z7x_B 254 ISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML------------- 318 (520)
T ss_dssp EEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC-------------
T ss_pred eecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc-------------
Confidence 99999999999988 9999999999999999 456 445444 67999999999876210
Q ss_pred HhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCC--CCCcccccCCCCCeEecCCCc
Q 003065 367 LALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTG--GISPLIGLSTSLSQLVLQNNR 444 (851)
Q Consensus 367 ~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~~~~L~~L~Ls~N~ 444 (851)
.+..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..+..+++|++|+|++|+
T Consensus 319 -------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~ 385 (520)
T 2z7x_B 319 -------------CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNS 385 (520)
T ss_dssp -------------CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSC
T ss_pred -------------chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCc
Confidence 12567889999999999999899999999999999999999997 455778999999999999999
Q ss_pred ceeeCCc-ccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCC
Q 003065 445 FSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPR 523 (851)
Q Consensus 445 l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 523 (851)
+++.+|. .+..+++|++|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|.
T Consensus 386 l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~ 461 (520)
T 2z7x_B 386 VSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPD 461 (520)
T ss_dssp CBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCT
T ss_pred CCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCH
Confidence 9985665 488899999999999999988887775 78999999999998 88888889999999999999999 4665
Q ss_pred C-ccccccCCeEeCCCCccccccC
Q 003065 524 S-LSLLSSLNALNLSGNKLTGSIP 546 (851)
Q Consensus 524 ~-~~~l~~L~~L~Ls~N~l~g~ip 546 (851)
. +..+++|+.|+|++|++++..+
T Consensus 462 ~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 462 GIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHhccCCcccEEECcCCCCcccCC
Confidence 5 8999999999999999998665
No 20
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.3e-51 Score=481.79 Aligned_cols=501 Identities=18% Similarity=0.275 Sum_probs=361.0
Q ss_pred hhhHHHHHHHHHhcCCCCCCCCCCCCCC-CC--Ccccc-eeEecCC---CCceEEEecccCCcceecCccccCCccCcEE
Q 003065 30 NVETQALIQFKSKLKDPHGVLDSWKESA-DS--PCGFS-GITCDSV---TGRVTEISFDNKSLSGEISSSISALQSLTVL 102 (851)
Q Consensus 30 ~~~~~aLl~fk~~~~~~~~~l~sW~~~~-~~--~c~w~-gv~c~~~---~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L 102 (851)
..+.+.-.++++-...-.+ .+|.... .+ .|+|. +..|+.. .| |+ .+.. .+++.|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~--~~w~~~~~~~~~~~~W~~~~~~c~w~~~~G-V~---C~~~-------------~~V~~L 86 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNG--KNWSQQGFGTQPGANWNFNKELDMWGAQPG-VS---LNSN-------------GRVTGL 86 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTG--GGCCCCC------CCCCCSSCGGGTTCCTT-EE---ECTT-------------CCEEEE
T ss_pred hhHHHHHHHHHHHHHHcCC--CCcccCCcCCccCCCCCCCCCcccccCCCC-eE---EcCC-------------CCEEEE
Confidence 4445566666655543333 4787442 12 24895 3444444 22 32 1111 468899
Q ss_pred eCCCCcccCccCcccccCCCCceEecccCccc------C------CCCCCCCCCCCCeEeccCcccCCCCcccccC-ccc
Q 003065 103 SLPFNVLSGKLPLELSNCSNLKVLNVTGNAMV------G------SVPDLSALKNLEIFDLSINYFTGRFPRWVVN-LTQ 169 (851)
Q Consensus 103 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~------~------~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~ 169 (851)
+|++|.++|.+|.+|++|++|++|+|++|.+. + .+|. ..+.+|+ ++++.|.+.+..|..+.. +..
T Consensus 87 ~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~-~~~~~l~-l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 87 SLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSD-EQKQKMR-MHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp ECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCH-HHHHHHH-THHHHHHTCCCGGGGSCHHHHH
T ss_pred EecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchH-HHHHHHH-hhHHHhhhccCchhhHHHHHHH
Confidence 99999999999999999999999999999872 2 1221 1145566 888888888888877653 345
Q ss_pred cceeecccccCCCCCCcccccCCCCCCeEec--ccccccccCCcccccccccCcccccccccccc---------------
Q 003065 170 LVSLSIGDNVYDEAEIPESIGNLKNLTYLFL--AHCNLRGRIPESISELRELGTLDICRNKISGE--------------- 232 (851)
Q Consensus 170 L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L--~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~--------------- 232 (851)
+..+++....+.. .....++.+.+ .+|++++ +|..++++++|++|+|++|++++.
T Consensus 165 l~~~~l~~~~~~~-------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 165 CINSDPQQKSIKK-------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp HHHHCTTSCCCCC-------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HhhcCcccccccc-------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhc
Confidence 5555555443321 11223344433 3578887 788888888888888888888875
Q ss_pred --cccccc--CCCcccEEEeeccCccCcCCcCcCCCCcccEEeccccc-ccC-CCCccccCc------CCccEEEccCCc
Q 003065 233 --FPRSIR--KLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQ-MYG-KLPEEIGNL------KNLTVFQCFKNN 300 (851)
Q Consensus 233 --~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~l~~N~ 300 (851)
+|..+. ++++|++|+|++|++.+.+|..|+++++|++|++++|+ +++ .+|..++++ ++|++|++++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred ccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 888887 88888888888888888888888888888888888887 887 788887776 888888888888
Q ss_pred cCCCCCC--CCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCcccccc
Q 003065 301 FSGEFPS--GFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVP 378 (851)
Q Consensus 301 l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p 378 (851)
++ .+|. .++++++|++|++++|+++|.+| .++.+++|+.|++++|+++ .+ |
T Consensus 317 l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~l------------------------p 369 (636)
T 4eco_A 317 LK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EI------------------------P 369 (636)
T ss_dssp CS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-EC------------------------C
T ss_pred CC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cc------------------------c
Confidence 88 7777 78888888888888888887777 7888888888888888876 44 4
Q ss_pred ccccCccc-cceeccccCccccccCCcccCcc--ccceEEecCCcCCCCCCcccc-------cCCCCCeEecCCCcceee
Q 003065 379 NSYADCKT-IQRLRISDNHLSGKIPDGLWALP--NVGMLDFGDNDFTGGISPLIG-------LSTSLSQLVLQNNRFSGE 448 (851)
Q Consensus 379 ~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~-------~~~~L~~L~Ls~N~l~~~ 448 (851)
..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|++++.+|..+. .+++|+.|+|++|++++.
T Consensus 370 ~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~l 448 (636)
T 4eco_A 370 ANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKF 448 (636)
T ss_dssp TTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSC
T ss_pred HhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcC
Confidence 45566666 777777777777 6676665544 777777777777777777666 666777888888887743
Q ss_pred CCcccccCCCCcEEeccCccccCCCccccccCC-------cccEEEecCCcccCCCCCCcc--cccccceeeccCccccc
Q 003065 449 LPSELGRLTNLERLILTNNNFSGKIPSALGALR-------QLSSLHLEENALTGSIPNEMG--DCARIVDLNLARNSLSG 519 (851)
Q Consensus 449 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~ 519 (851)
.+..+..+++|++|+|++|+++...+..+..+. +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++
T Consensus 449 p~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 449 PKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp CTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred CHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 333445577888888888888733333333332 7888888888887 6777776 78888888888888886
Q ss_pred ccCCCccccccCCeEeC------CCCccccccCcccccc-cceEEeCcCCcccccCCcccccCCCCccccCCCCCCCC
Q 003065 520 NIPRSLSLLSSLNALNL------SGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEGLCLD 590 (851)
Q Consensus 520 ~~p~~~~~l~~L~~L~L------s~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~gn~~lc~~ 590 (851)
+|..+..+++|+.|+| ++|++.+.+|..+..+ .|+.||+++|++ +.+|..+...-..-...+|+..|..
T Consensus 528 -ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 528 -FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp -CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred -cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 7888888888888888 6788999999999999 999999999999 8899764421112334677766644
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.3e-48 Score=461.34 Aligned_cols=492 Identities=18% Similarity=0.174 Sum_probs=385.9
Q ss_pred CceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEec
Q 003065 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDL 151 (851)
Q Consensus 73 ~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 151 (851)
..++.|||++|.|++..+.+|..+++|++|||++|+|++..|.+|++|++|++|+|++|++++.++. |.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 4688899999999876667899999999999999999876677889999999999999998887776 888999999999
Q ss_pred cCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccC----ccccccc
Q 003065 152 SINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELG----TLDICRN 227 (851)
Q Consensus 152 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~L~~N 227 (851)
++|++++..+..|.++++|++|+|++|.+....+|..++.+++|++|+|++|++++..|..|..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 999998877778889999999999999887667788888899999999999999888888887777655 4677888
Q ss_pred cccccccccccCCCcccEEEeeccCccCc-CCcCcCCCCcccE------------------------------Eeccccc
Q 003065 228 KISGEFPRSIRKLQKLWKIELYANNLTGE-LPAELGNLTLLQE------------------------------FDISSNQ 276 (851)
Q Consensus 228 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~------------------------------L~Ls~N~ 276 (851)
.++...+..+ ....+..+++.+|..... .+..+..+..++. .++..+.
T Consensus 212 ~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 8875444433 334566677776654321 1122233333333 3333222
Q ss_pred ccC---CCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccC
Q 003065 277 MYG---KLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSF 353 (851)
Q Consensus 277 l~~---~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 353 (851)
... ..+..+..+.+++.+++.+|.+.... .+.....|+.|++.+|.+....+. .+..|+.++++.|.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc
Confidence 211 11223444556667777776665332 245556777788888777654443 3456777777777765432
Q ss_pred chhhhhhcchHHHHhccCCccc--cccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCC-cccc
Q 003065 354 PKYLCEKRKLLNLLALSNNFSG--EVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIG 430 (851)
Q Consensus 354 p~~~~~~~~L~~l~l~~n~~~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 430 (851)
....+++++.++++.|.+.. ..+..+..+.+|++|+++.|.+. ..+..+..+++|+.++++.|+.....+ ..+.
T Consensus 366 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~ 442 (635)
T 4g8a_A 366 --SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 442 (635)
T ss_dssp --CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTT
T ss_pred --ccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccc
Confidence 23456778888888887753 45566777889999999999987 466678889999999999988766544 5678
Q ss_pred cCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCcccc-CCCccccccCCcccEEEecCCcccCCCCCCcccccccce
Q 003065 431 LSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFS-GKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVD 509 (851)
Q Consensus 431 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 509 (851)
.+++++.++++.|.+.+..|..+..++.|+.|+|++|.+. +.+|..|..+++|++|+|++|+|++.+|..|+++++|+.
T Consensus 443 ~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~ 522 (635)
T 4g8a_A 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 522 (635)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCE
Confidence 8999999999999999999999999999999999999854 567889999999999999999999999999999999999
Q ss_pred eeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc--cceEEeCcCCcccccCCcccc
Q 003065 510 LNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL--KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 510 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l--~L~~l~ls~N~l~~~~p~~~~ 573 (851)
|+|++|+|++..|..|..+++|+.|||++|+|++..|..+..+ +|+.|++++|+|.|+|...|.
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~ 588 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSF 588 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHH
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHH
Confidence 9999999999999999999999999999999999999999887 799999999999999986543
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.9e-48 Score=453.34 Aligned_cols=459 Identities=21% Similarity=0.239 Sum_probs=381.6
Q ss_pred EEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCc
Q 003065 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSIN 154 (851)
Q Consensus 76 ~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N 154 (851)
+.+|++++++++ +|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|. |.++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 688999999995 888775 8999999999999988888999999999999999999998776 999999999999999
Q ss_pred ccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccccccc--Cccccccccc--c
Q 003065 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL--GTLDICRNKI--S 230 (851)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~i--~ 230 (851)
.++ .+|.. .+++|++|++++|.+....+|..++++++|++|++++|++++. .+..+++| ++|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 998 56666 8999999999999998556778999999999999999999863 45555666 9999999999 8
Q ss_pred ccccccccCCC-cccEEEeeccCccCcCCc-CcCCCCcccEEeccccc-----ccCCCCccccCcCCccEEEccCCccCC
Q 003065 231 GEFPRSIRKLQ-KLWKIELYANNLTGELPA-ELGNLTLLQEFDISSNQ-----MYGKLPEEIGNLKNLTVFQCFKNNFSG 303 (851)
Q Consensus 231 ~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-----l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (851)
+..|..+..+. ....++++.|.+.+.++. .+..+++|+.|++++|+ +.+ .+..+..+++|+.|+++++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 88898888765 223678899999876664 56789999999999985 222 23457788899999998887764
Q ss_pred CCCCC---CCCcccccEEEeccCcCCCCCCCcc-----CCCCccceeeccCCcccccCch-hhhhhcchHHHHhccCCcc
Q 003065 304 EFPSG---FGDMRKLFAFSIYGNRFSGPFPENL-----GRYTALTDVDISENQFSGSFPK-YLCEKRKLLNLLALSNNFS 374 (851)
Q Consensus 304 ~~p~~---~~~l~~L~~L~l~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~L~~l~l~~n~~~ 374 (851)
..... ....++|++|++++|+++|.+|..+ ..++.|+.++++.|.+ .+|. ++...
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~-------------- 327 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV-------------- 327 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH--------------
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh--------------
Confidence 21110 1123489999999999998899887 7778888888888777 4553 22211
Q ss_pred ccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCccee--eCCcc
Q 003065 375 GEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSG--ELPSE 452 (851)
Q Consensus 375 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~--~~p~~ 452 (851)
....+|++|++++|.+.... ....+++|++|++++|++++.+|..+..+++|+.|+|++|++++ .+|..
T Consensus 328 -------~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 398 (562)
T 3a79_B 328 -------FAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALM 398 (562)
T ss_dssp -------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHT
T ss_pred -------hccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhh
Confidence 01146899999999886322 12678999999999999999899999999999999999999996 34577
Q ss_pred cccCCCCcEEeccCccccCCCc-cccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccC
Q 003065 453 LGRLTNLERLILTNNNFSGKIP-SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSL 531 (851)
Q Consensus 453 ~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (851)
+..+++|++|++++|++++.+| ..+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|
T Consensus 399 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 399 TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 8999999999999999998455 5688999999999999999988887765 78999999999999 788888899999
Q ss_pred CeEeCCCCccccccCcc-cccc-cceEEeCcCCcccccCCcccc
Q 003065 532 NALNLSGNKLTGSIPDN-LMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 532 ~~L~Ls~N~l~g~ip~~-l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
+.|+|++|+|+ .+|.. +..+ .|+.|++++|+|.|.+|..+.
T Consensus 476 ~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 476 QELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp SEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred CEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 99999999999 67776 7777 899999999999999997554
No 23
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.8e-46 Score=402.26 Aligned_cols=292 Identities=30% Similarity=0.512 Sum_probs=254.0
Q ss_pred CCchhhHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc--cceeEecCCC--CceEEEecccCCcce--ecCccccCCccCc
Q 003065 27 LSLNVETQALIQFKSKLKDPHGVLDSWKESADSPCG--FSGITCDSVT--GRVTEISFDNKSLSG--EISSSISALQSLT 100 (851)
Q Consensus 27 ~~~~~~~~aLl~fk~~~~~~~~~l~sW~~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~i~~~l~~l~~L~ 100 (851)
.|.++|++||++||+++.||. .+++|..+ +|||. |.||+|+..+ ++|+.|+|++++++| .+|+.++.+++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 599999999999999999887 78999876 78998 9999998765 899999999999999 9999999999999
Q ss_pred EEeCCC-CcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccc
Q 003065 101 VLSLPF-NVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (851)
Q Consensus 101 ~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 178 (851)
+|+|++ |.+++.+|..|+++++|++|+|++|.+++.+|. +..+++|++|||++|.+++.+|..+.++++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 999999999999999999999999999977776 999999999999999999889999999999999999999
Q ss_pred cCCCCCCcccccCCC-CCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcC
Q 003065 179 VYDEAEIPESIGNLK-NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGEL 257 (851)
Q Consensus 179 ~l~~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 257 (851)
.++ +.+|..++.++ +|++|++++|++++.+|..+..++ |++|++++|++++..|..|..+++|++|+|++|++++.+
T Consensus 160 ~l~-~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 160 RIS-GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp CCE-EECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred ccc-CcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 887 67888888887 889999999988888888888887 888888888888888888888888888888888888665
Q ss_pred CcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCc
Q 003065 258 PAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (851)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (851)
|. +..+++|++|+|++|++++.+|..+.++++|++|++++|++++.+|.. ..+++|+.+++++|+
T Consensus 238 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred Cc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 55 677788888888888888778888888888888888888887777764 666666666666666
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-44 Score=429.54 Aligned_cols=526 Identities=19% Similarity=0.179 Sum_probs=401.9
Q ss_pred CCCCCCCCCCCCCCCCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCc
Q 003065 45 DPHGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLK 124 (851)
Q Consensus 45 ~~~~~l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 124 (851)
|+...+++|... -|..|....|.... +.++.++.+|+ .||+.+. +++++|||++|+|++..|..|.++++|+
T Consensus 8 ~~~~~~~~~~~~--~p~~~~~c~~~~~~---~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~ 79 (635)
T 4g8a_A 8 DDDDKLAAANSS--IPESWEPCVEVVPN---ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQ 79 (635)
T ss_dssp -------------------CCSEEEETT---TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCcchhhcccCC--CCCCCCCccccCCC---CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCC
Confidence 455567777764 35566655554222 13567777777 6777664 5899999999999977778899999999
Q ss_pred eEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCc-ccccCCCCCCeEeccc
Q 003065 125 VLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP-ESIGNLKNLTYLFLAH 202 (851)
Q Consensus 125 ~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~L~~ 202 (851)
+|||++|+|++.++. |.++++|++|+|++|++++..+.+|.++++|++|+|++|+++ .+| ..|+++++|++|+|++
T Consensus 80 ~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~--~l~~~~~~~L~~L~~L~Ls~ 157 (635)
T 4g8a_A 80 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA--SLENFPIGHLKTLKELNVAH 157 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCC--CSTTCCCTTCTTCCEEECCS
T ss_pred EEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCC--CCChhhhhcCcccCeecccc
Confidence 999999999998886 999999999999999999888889999999999999999997 444 4699999999999999
Q ss_pred ccccc-cCCcccccccccCccccccccccccccccccCCCccc----EEEeeccCccCcCCcCcCCCCcccEEecccccc
Q 003065 203 CNLRG-RIPESISELRELGTLDICRNKISGEFPRSIRKLQKLW----KIELYANNLTGELPAELGNLTLLQEFDISSNQM 277 (851)
Q Consensus 203 n~l~~-~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 277 (851)
|.+++ .+|..+..+++|++|++++|+|++..|..|..+.+++ .++++.|.++...+..+ ....++.+++++|..
T Consensus 158 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~ 236 (635)
T 4g8a_A 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFD 236 (635)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCS
T ss_pred CccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccc
Confidence 99986 4678899999999999999999998888887766544 78999999996555444 456788899998865
Q ss_pred cCCC-CccccCcCCccEEEccCCcc------CCC---------------------------CCCCCCCcccccEEEeccC
Q 003065 278 YGKL-PEEIGNLKNLTVFQCFKNNF------SGE---------------------------FPSGFGDMRKLFAFSIYGN 323 (851)
Q Consensus 278 ~~~~-p~~l~~l~~L~~L~l~~N~l------~~~---------------------------~p~~~~~l~~L~~L~l~~N 323 (851)
...+ +..+..+..++...+..+.. ... .+..+..+.+++.+.+.+|
T Consensus 237 ~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 316 (635)
T 4g8a_A 237 SLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSV 316 (635)
T ss_dssp SHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESC
T ss_pred cccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccc
Confidence 5322 23455555555554432221 111 1223444556666666666
Q ss_pred cCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCcccc--cc
Q 003065 324 RFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSG--KI 401 (851)
Q Consensus 324 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~ 401 (851)
.+... ..+.....|+.|++++|.+.+..+.. +..+..+.+..|..... ..+..+++|+.|++++|.+.. ..
T Consensus 317 ~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~---l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~ 389 (635)
T 4g8a_A 317 TIERV--KDFSYNFGWQHLELVNCKFGQFPTLK---LKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCC 389 (635)
T ss_dssp EEEEC--GGGGSCCCCSEEEEESCEESSCCCCB---CTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEEC
T ss_pred ccccc--cccccchhhhhhhcccccccCcCccc---chhhhhcccccccCCCC--cccccccccccchhhcccccccccc
Confidence 66532 23455667888888888877544433 34455556666655433 345578899999999999863 44
Q ss_pred CCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCC-cccccCCCCcEEeccCccccCCCccccccC
Q 003065 402 PDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGAL 480 (851)
Q Consensus 402 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 480 (851)
+..+..+.+|+.++++.|.+.... ..+..+++|+.+++++|......+ ..|..+.+++.++++.|.+.+..|..+..+
T Consensus 390 ~~~~~~~~~L~~L~~~~~~~~~~~-~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~ 468 (635)
T 4g8a_A 390 SQSDFGTISLKYLDLSFNGVITMS-SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 468 (635)
T ss_dssp CHHHHSCSCCCEEECCSCSEEEEC-SCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTC
T ss_pred ccchhhhhhhhhhhcccccccccc-ccccccccccchhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 556677889999999999887544 456788999999999998876654 567889999999999999999999999999
Q ss_pred CcccEEEecCCcc-cCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEe
Q 003065 481 RQLSSLHLEENAL-TGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSID 558 (851)
Q Consensus 481 ~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ 558 (851)
+.|+.|+|++|++ .+.+|..|..+++|+.|+|++|+|++.+|.+|.++++|+.|+|++|+|++..|..+..+ +|+.||
T Consensus 469 ~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 548 (635)
T 4g8a_A 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548 (635)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEE
T ss_pred hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEE
Confidence 9999999999975 45688999999999999999999999999999999999999999999998888889988 999999
Q ss_pred CcCCcccccCCcccccC-CC--CccccCCCCCCC
Q 003065 559 LSENQLSGSVPLDFLRM-GG--DGAFAGNEGLCL 589 (851)
Q Consensus 559 ls~N~l~~~~p~~~~~~-~~--~~~~~gn~~lc~ 589 (851)
+++|++++..|..+... .. .-...+||..|.
T Consensus 549 Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999998776543 11 234578998885
No 25
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.6e-45 Score=425.01 Aligned_cols=451 Identities=19% Similarity=0.214 Sum_probs=320.6
Q ss_pred cCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecc
Q 003065 98 SLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIG 176 (851)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 176 (851)
..+++|+++|++++ +|..+. ++|++|+|++|.+++.++. +.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 34788888888884 777664 7888888888888887764 8888888888888888887777788888888888888
Q ss_pred cccCCCCCCcccccCCCCCCeEeccccccccc-CCcccccccccCccccccccccccccccccCCCcc--cEEEeeccCc
Q 003065 177 DNVYDEAEIPESIGNLKNLTYLFLAHCNLRGR-IPESISELRELGTLDICRNKISGEFPRSIRKLQKL--WKIELYANNL 253 (851)
Q Consensus 177 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L--~~L~L~~N~l 253 (851)
+|.++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 109 ~N~l~--~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 109 HNRLQ--NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TSCCC--EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCcCC--ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 88876 56665 677888888888887752 356777777777777777777643 33334444 7777777777
Q ss_pred --cCcCCcCcCCCC--cccEEecccccccCCCCc-cccCcCCccEEEccCCcc-----CCCCCCCCCCcccccEEEeccC
Q 003065 254 --TGELPAELGNLT--LLQEFDISSNQMYGKLPE-EIGNLKNLTVFQCFKNNF-----SGEFPSGFGDMRKLFAFSIYGN 323 (851)
Q Consensus 254 --~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~l~~N~l-----~~~~p~~~~~l~~L~~L~l~~N 323 (851)
++..|..+..+. .+ .+++++|.+.+.++. .+.++++|+.+++++|+. .+. +..+..+++|+.|++.++
T Consensus 182 ~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp CCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEE
T ss_pred cccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCC
Confidence 666666665544 22 446666666655444 344566666666666531 111 112334444444444444
Q ss_pred cCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccc-----cCccccceeccccCccc
Q 003065 324 RFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSY-----ADCKTIQRLRISDNHLS 398 (851)
Q Consensus 324 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~-----~~l~~L~~L~Ls~N~l~ 398 (851)
.+++.. +.+ ++..+ ...+|++|++.+|.+.|.+|..+ .+++.|+.++++.|.+
T Consensus 260 ~l~~~~-------------------~~~-~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~- 317 (562)
T 3a79_B 260 ETTWKC-------------------SVK-LFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF- 317 (562)
T ss_dssp EECHHH-------------------HHH-HHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-
T ss_pred cCcHHH-------------------HHH-HHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-
Confidence 433210 000 11111 11244445555555555555554 6777888888888887
Q ss_pred cccC-CcccCc---cccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCC--
Q 003065 399 GKIP-DGLWAL---PNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK-- 472 (851)
Q Consensus 399 ~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-- 472 (851)
.+| ..+..+ .+|+.|++++|.+.... ....+++|++|++++|++++.+|..+.++++|++|+|++|++++.
T Consensus 318 -~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 394 (562)
T 3a79_B 318 -LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK 394 (562)
T ss_dssp -SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTH
T ss_pred -ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCccc
Confidence 445 333332 67999999999986543 226789999999999999998999999999999999999999974
Q ss_pred CccccccCCcccEEEecCCcccCCCCC-CcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCccccc
Q 003065 473 IPSALGALRQLSSLHLEENALTGSIPN-EMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMK 551 (851)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 551 (851)
+|..+..+++|+.|+|++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..
T Consensus 395 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~ 471 (562)
T 3a79_B 395 VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTH 471 (562)
T ss_dssp HHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTS
T ss_pred chhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcC
Confidence 357899999999999999999985665 588999999999999999998887765 78999999999999 89988888
Q ss_pred c-cceEEeCcCCcccccCCcc-cccCCC--CccccCCCCCCC
Q 003065 552 L-KLSSIDLSENQLSGSVPLD-FLRMGG--DGAFAGNEGLCL 589 (851)
Q Consensus 552 l-~L~~l~ls~N~l~~~~p~~-~~~~~~--~~~~~gn~~lc~ 589 (851)
+ .|+.||+++|+++ .+|.. +..... .-...+|+..|.
T Consensus 472 l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 472 LQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp SCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred CCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 8 9999999999999 57765 332222 233577877764
No 26
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.9e-45 Score=415.06 Aligned_cols=404 Identities=22% Similarity=0.291 Sum_probs=216.4
Q ss_pred ceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccC
Q 003065 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (851)
Q Consensus 74 ~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (851)
++++++++++.+ |.+|++++++++|++|++++|.++|.+|.+++++++|+.+++++|.. +++++|++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------~~l~~L~l~~ 80 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------RQAHELELNN 80 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH----------HTCSEEECTT
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc----------cCCCEEEecC
Confidence 344445555555 45555555555555555555555555555555555444444444331 3457888888
Q ss_pred cccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccc
Q 003065 154 NYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (851)
Q Consensus 154 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~ 233 (851)
|.+++ +|.. .++|++|++++|.++ .+|.. +++|++|++++|++++ +|... ++|++|++++|++++ +
T Consensus 81 ~~l~~-lp~~---~~~L~~L~l~~n~l~--~lp~~---~~~L~~L~l~~n~l~~-l~~~~---~~L~~L~L~~n~l~~-l 146 (454)
T 1jl5_A 81 LGLSS-LPEL---PPHLESLVASCNSLT--ELPEL---PQSLKSLLVDNNNLKA-LSDLP---PLLEYLGVSNNQLEK-L 146 (454)
T ss_dssp SCCSC-CCSC---CTTCSEEECCSSCCS--SCCCC---CTTCCEEECCSSCCSC-CCSCC---TTCCEEECCSSCCSS-C
T ss_pred Ccccc-CCCC---cCCCCEEEccCCcCC--ccccc---cCCCcEEECCCCccCc-ccCCC---CCCCEEECcCCCCCC-C
Confidence 88775 3332 367888888888876 36653 3678888888888874 33221 578888888888885 6
Q ss_pred cccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcc
Q 003065 234 PRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMR 313 (851)
Q Consensus 234 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 313 (851)
| .|.++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++++++|+.|++++|++++ +|... +
T Consensus 147 p-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~ 215 (454)
T 1jl5_A 147 P-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---L 215 (454)
T ss_dssp C-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---T
T ss_pred c-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---C
Confidence 6 58888888888888888874 55543 578888888888875 55 57888888888888888875 44432 4
Q ss_pred cccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccc
Q 003065 314 KLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRIS 393 (851)
Q Consensus 314 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls 393 (851)
+|++|++++|+++ .+| .++.+++|+.|++++|++++ +|.. .++|++|+++
T Consensus 216 ~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---------------------------~~~L~~L~l~ 265 (454)
T 1jl5_A 216 SLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---------------------------PPSLEALNVR 265 (454)
T ss_dssp TCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---------------------------CTTCCEEECC
T ss_pred cccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---------------------------ccccCEEECC
Confidence 7788888888887 566 37788888888888888773 3321 1356666666
Q ss_pred cCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccC-CCCcEEeccCccccCC
Q 003065 394 DNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRL-TNLERLILTNNNFSGK 472 (851)
Q Consensus 394 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~ 472 (851)
+|++++ +|.. +++|+.|++++|++++... ..++|+.|++++|++++. + .+ ++|++|++++|++++
T Consensus 266 ~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 266 DNYLTD-LPEL---PQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-
T ss_pred CCcccc-cCcc---cCcCCEEECcCCccCcccC----cCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-
Confidence 666653 4432 2556666666666654211 124566666666666532 1 12 356666666666664
Q ss_pred CccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCccccc--ccCCCcccc-------------ccCCeEeCC
Q 003065 473 IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSG--NIPRSLSLL-------------SSLNALNLS 537 (851)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l-------------~~L~~L~Ls 537 (851)
+|.. +++|+.|++++|+++ .+|. .+++|+.|++++|++++ .+|.++..+ ++|+.||++
T Consensus 332 lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls 404 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVE 404 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------
T ss_pred cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECC
Confidence 3333 355666666666665 3444 34566666666666665 555555443 455555555
Q ss_pred CCcccc--ccCcccccccceEEeCcCCcccccCC
Q 003065 538 GNKLTG--SIPDNLMKLKLSSIDLSENQLSGSVP 569 (851)
Q Consensus 538 ~N~l~g--~ip~~l~~l~L~~l~ls~N~l~~~~p 569 (851)
+|+++| .+|.++ +.|.+++|.+.+.+|
T Consensus 405 ~N~l~~~~~iP~sl-----~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 405 TNPLREFPDIPESV-----EDLRMNSERVVDPYE 433 (454)
T ss_dssp ----------------------------------
T ss_pred CCcCCccccchhhH-----hheeCcCcccCCccc
Confidence 555554 444432 233445555555444
No 27
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.7e-44 Score=406.64 Aligned_cols=383 Identities=19% Similarity=0.175 Sum_probs=240.7
Q ss_pred eEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccC-CcccccccccCcccccc
Q 003065 148 IFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRI-PESISELRELGTLDICR 226 (851)
Q Consensus 148 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~ 226 (851)
.++.+++.++ .+|. + .++|++|+|++|.+. ...|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++
T Consensus 14 ~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 14 NAICINRGLH-QVPE-L--PAHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp EEECCSSCCS-SCCC-C--CTTCCEEECCSSCCC-EECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred ccCcCCCCcc-cCCC-C--CCccCEEEecCCccC-cCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 4555555554 3333 1 145555555555554 223445555555555555555554333 33455555555555555
Q ss_pred ccccccccccccCCCcccEEEeeccCccCcCCcC--cCCCCcccEEecccccccCCCCcc-ccCcCCccEEEccCCccCC
Q 003065 227 NKISGEFPRSIRKLQKLWKIELYANNLTGELPAE--LGNLTLLQEFDISSNQMYGKLPEE-IGNLKNLTVFQCFKNNFSG 303 (851)
Q Consensus 227 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~l~~N~l~~ 303 (851)
|++++..|..|.++++|++|+|++|++++..|.. |..+++|++|+|++|++++..|.. +.++++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 5555544555555555555555555555433322 555555555555555555444443 4455555555555555555
Q ss_pred CCCCCCCCc--ccccEEEeccCcCCCCCCCcc--------CCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCc
Q 003065 304 EFPSGFGDM--RKLFAFSIYGNRFSGPFPENL--------GRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNF 373 (851)
Q Consensus 304 ~~p~~~~~l--~~L~~L~l~~N~l~~~~p~~l--------~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~ 373 (851)
..|..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+....
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~------------ 236 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAI------------ 236 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHT------------
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccc------------
Confidence 444444443 344555555555443333221 1334444444444444443333332210
Q ss_pred cccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCccccc--CCCCCeEecCCCcceeeCCc
Q 003065 374 SGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL--STSLSQLVLQNNRFSGELPS 451 (851)
Q Consensus 374 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--~~~L~~L~Ls~N~l~~~~p~ 451 (851)
..++|+.|++++|.+.+... ..+.+.+..+..+.. .++|+.|++++|++++..|.
T Consensus 237 ---------~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 293 (455)
T 3v47_A 237 ---------AGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKS 293 (455)
T ss_dssp ---------TTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTT
T ss_pred ---------cccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchh
Confidence 11345555555554432110 111222222222322 36899999999999999999
Q ss_pred ccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccC
Q 003065 452 ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSL 531 (851)
Q Consensus 452 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (851)
.|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..++.+++|+.|+|++|++++..|.++..+++|
T Consensus 294 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 294 VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccc
Confidence 99999999999999999998889999999999999999999998889999999999999999999999999999999999
Q ss_pred CeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCc
Q 003065 532 NALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPL 570 (851)
Q Consensus 532 ~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~ 570 (851)
+.|+|++|++++..+..+..+ .|+.|++++|+++|.+|.
T Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 374 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 999999999996555567777 899999999999999994
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.9e-44 Score=405.58 Aligned_cols=384 Identities=18% Similarity=0.165 Sum_probs=245.5
Q ss_pred cEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccc
Q 003065 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (851)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 178 (851)
+.++.++++++ .+|. +. ++|++|+|++|.+++.+|. ++++++|++|+|++|.+.+.++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~----------------- 71 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIR----------------- 71 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEEC-----------------
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceEC-----------------
Confidence 45666666665 4554 22 5666666666666665444 6666666666666666553331
Q ss_pred cCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCcccccccccccccccc--ccCCCcccEEEeeccCccCc
Q 003065 179 VYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRS--IRKLQKLWKIELYANNLTGE 256 (851)
Q Consensus 179 ~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~--~~~l~~L~~L~L~~N~l~~~ 256 (851)
|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|.. |..+++|++|+|++|++++.
T Consensus 72 -------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 144 (455)
T 3v47_A 72 -------NNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI 144 (455)
T ss_dssp -------TTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC
T ss_pred -------cccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc
Confidence 233444555555555555555444555555555555555555555433332 55555555555555555555
Q ss_pred CCcC-cCCCCcccEEecccccccCCCCccccCc--CCccEEEccCCccCCCCCCC--------CCCcccccEEEeccCcC
Q 003065 257 LPAE-LGNLTLLQEFDISSNQMYGKLPEEIGNL--KNLTVFQCFKNNFSGEFPSG--------FGDMRKLFAFSIYGNRF 325 (851)
Q Consensus 257 ~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~l~~N~l~~~~p~~--------~~~l~~L~~L~l~~N~l 325 (851)
.|.. +.++++|++|++++|++++..|..+.++ .+|+.|++++|.+.+..+.. +..+++|++|++++|++
T Consensus 145 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 224 (455)
T 3v47_A 145 QPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGF 224 (455)
T ss_dssp CCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCC
T ss_pred CcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcc
Confidence 4543 5556666666666666655555555544 45666666666666443332 33567788888888888
Q ss_pred CCCCCCccCCC---CccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccC
Q 003065 326 SGPFPENLGRY---TALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIP 402 (851)
Q Consensus 326 ~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 402 (851)
++..|..+... ++|+.|++++|.+.+... ..+++.+..+..+..+
T Consensus 225 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~------------------ 272 (455)
T 3v47_A 225 KESMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGL------------------ 272 (455)
T ss_dssp CHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGG------------------
T ss_pred cccchhhhhccccccceeeEeecccccccccc--------------chhhhccCcccccccc------------------
Confidence 77777666543 778888888887654211 1112222222222211
Q ss_pred CcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCc
Q 003065 403 DGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQ 482 (851)
Q Consensus 403 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 482 (851)
..++|+.|++++|++++.++..+..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++
T Consensus 273 ----~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 273 ----EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp ----TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred ----cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 1245666666666666666666666677777777777777777777888888888888888887777778888888
Q ss_pred ccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCc
Q 003065 483 LSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPD 547 (851)
Q Consensus 483 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~ 547 (851)
|++|+|++|++++..|..++.+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|.
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 88888888888877788888888888888888888876667788899999999999999988873
No 29
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.5e-44 Score=404.65 Aligned_cols=388 Identities=23% Similarity=0.290 Sum_probs=236.5
Q ss_pred ceEEEecccCCcceecCccccCCccC-------------cEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCC
Q 003065 74 RVTEISFDNKSLSGEISSSISALQSL-------------TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDL 140 (851)
Q Consensus 74 ~v~~l~l~~~~l~g~i~~~l~~l~~L-------------~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l 140 (851)
+.+.++++++.++|.+|++++.+++| ++|++++|.+++ +|.. .++|++|++++|.+++. |.
T Consensus 35 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~l-p~- 108 (454)
T 1jl5_A 35 SKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTEL-PE- 108 (454)
T ss_dssp CHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSSC-CC-
T ss_pred chhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCcc-cc-
Confidence 56678899999999999999999986 888888888775 4442 36788888888888774 33
Q ss_pred CCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccC
Q 003065 141 SALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELG 220 (851)
Q Consensus 141 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 220 (851)
.+++|++|++++|.+++. |.. .++|++|++++|.+. .+| .++++++|++|++++|++++ +|..+ .+|+
T Consensus 109 -~~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~--~lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~ 176 (454)
T 1jl5_A 109 -LPQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLE--KLP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLE 176 (454)
T ss_dssp -CCTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCS--SCC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCC
T ss_pred -ccCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCC--CCc-ccCCCCCCCEEECCCCcCcc-cCCCc---cccc
Confidence 236788888888877742 221 157788888888776 366 47777888888888887774 55443 4677
Q ss_pred ccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCc
Q 003065 221 TLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNN 300 (851)
Q Consensus 221 ~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~ 300 (851)
+|++++|++++ +| .+.++++|++|++++|++++ +|... ++|++|++++|+++ .+| .++.+++|++|++++|+
T Consensus 177 ~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~ 248 (454)
T 1jl5_A 177 FIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNL 248 (454)
T ss_dssp EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSC
T ss_pred EEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCc
Confidence 77777777775 45 57777777777777777774 44332 47777777777777 555 37777777777777777
Q ss_pred cCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCcccccccc
Q 003065 301 FSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNS 380 (851)
Q Consensus 301 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~ 380 (851)
+++ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|++++. | .+|
T Consensus 249 l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~---------------------~~~-- 296 (454)
T 1jl5_A 249 LKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-S---------------------ELP-- 296 (454)
T ss_dssp CSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-S---------------------CCC--
T ss_pred CCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-c---------------------CcC--
Confidence 774 4432 3667777777777775 4433 25677777777776631 1 111
Q ss_pred ccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCc
Q 003065 381 YADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLE 460 (851)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 460 (851)
++|++|++++|++++ ++.. .++|+.|++++|++++. |.. +++|+.|++++|+++ .+|. .+++|+
T Consensus 297 ----~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~l-p~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~ 360 (454)
T 1jl5_A 297 ----PNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIEL-PAL---PPRLERLIASFNHLA-EVPE---LPQNLK 360 (454)
T ss_dssp ----TTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCS-CCCC---CCTTCC
T ss_pred ----CcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCccccc-ccc---CCcCCEEECCCCccc-cccc---hhhhcc
Confidence 468888999998885 3321 25788889998888874 332 478888888888888 4665 467888
Q ss_pred EEeccCccccC--CCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCccccc--ccCCCccccccCCeEeC
Q 003065 461 RLILTNNNFSG--KIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSG--NIPRSLSLLSSLNALNL 536 (851)
Q Consensus 461 ~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L 536 (851)
+|++++|++++ .+|..++. |+.|.+.|.+|.. +++|+.|++++|++++ .+|. +++.|.+
T Consensus 361 ~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~ 423 (454)
T 1jl5_A 361 QLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRM 423 (454)
T ss_dssp EEECCSSCCSSCCCCCTTCCE--------EECCC----------------------------------------------
T ss_pred EEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh------hHhheeC
Confidence 88888888887 56666553 3457777777764 4789999999999997 6664 3567788
Q ss_pred CCCccccccCcccccc
Q 003065 537 SGNKLTGSIPDNLMKL 552 (851)
Q Consensus 537 s~N~l~g~ip~~l~~l 552 (851)
.+|.+.+.+|.+....
T Consensus 424 ~~~~~~~~~~~~~~~~ 439 (454)
T 1jl5_A 424 NSERVVDPYEFAHETT 439 (454)
T ss_dssp ----------------
T ss_pred cCcccCCccccCHHHh
Confidence 9999998887766543
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.4e-41 Score=385.33 Aligned_cols=364 Identities=19% Similarity=0.207 Sum_probs=239.3
Q ss_pred ceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCccccc
Q 003065 86 SGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVV 165 (851)
Q Consensus 86 ~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 165 (851)
.+..+.+++.+++|++|+|++|.+++ +| .|+.+++|++|+|++|++++. | ++.+++|++|++++|.+++. + +.
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~~-~--~~ 103 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTNL-D--VT 103 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSCC-C--CT
T ss_pred CcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCcee-e--cC
Confidence 33444567788888899998888886 45 688888888888888888875 3 78888888888888888864 3 77
Q ss_pred CccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccE
Q 003065 166 NLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWK 245 (851)
Q Consensus 166 ~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 245 (851)
++++|++|++++|+++ .+| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .+..+++|++
T Consensus 104 ~l~~L~~L~L~~N~l~--~l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 174 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLT--KLD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTT 174 (457)
T ss_dssp TCTTCCEEECCSSCCS--CCC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCE
T ss_pred CCCcCCEEECCCCcCC--eec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCE
Confidence 8888888888888886 344 77888888888888888763 2 777788888888888554444 4677777888
Q ss_pred EEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcC
Q 003065 246 IELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRF 325 (851)
Q Consensus 246 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 325 (851)
|++++|++++ +| +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++
T Consensus 175 L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 175 LDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp EECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCC
T ss_pred EECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcC
Confidence 8888887775 34 66777777888877777754 36677777777777777776 44 66777777777777777
Q ss_pred CCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcc
Q 003065 326 SGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGL 405 (851)
Q Consensus 326 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 405 (851)
++.. ++.+++|+.|++++|++ +.|++++|.+.+.+| +
T Consensus 246 ~~~~---~~~l~~L~~L~l~~n~L--------------------------------------~~L~l~~n~~~~~~~--~ 282 (457)
T 3bz5_A 246 TELD---VSTLSKLTTLHCIQTDL--------------------------------------LEIDLTHNTQLIYFQ--A 282 (457)
T ss_dssp SCCC---CTTCTTCCEEECTTCCC--------------------------------------SCCCCTTCTTCCEEE--C
T ss_pred CCcC---HHHCCCCCEEeccCCCC--------------------------------------CEEECCCCccCCccc--c
Confidence 7643 34456666666665533 334444444444443 2
Q ss_pred cCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccE
Q 003065 406 WALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSS 485 (851)
Q Consensus 406 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 485 (851)
+.+++|+.|++++|.+.+.+|. ..++|+.|++++| ++|++|++++|++++. + ++.+++|+.
T Consensus 283 ~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~ 343 (457)
T 3bz5_A 283 EGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKS 343 (457)
T ss_dssp TTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSE
T ss_pred cccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcE
Confidence 3344444444444443333331 1233444444333 4566666666666653 2 556666666
Q ss_pred EEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCccc
Q 003065 486 LHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNL 549 (851)
Q Consensus 486 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l 549 (851)
|++++|++++ ++.|..|++++|.++|. ..+..|+.+++++|+++|.||..+
T Consensus 344 L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 344 LSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp EECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred EECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 6666666654 13455556666666654 344555666666666666666544
No 31
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4e-41 Score=381.51 Aligned_cols=367 Identities=18% Similarity=0.199 Sum_probs=300.4
Q ss_pred CcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCc
Q 003065 107 NVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP 186 (851)
Q Consensus 107 n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p 186 (851)
....+..+..++++++|++|+|++|.+++. |.++.+++|++|+|++|.+++. | +..+++|++|++++|.++ .+|
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~--~~~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLT--NLD 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-TTGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCS--CCC
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-hhhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCc--eee
Confidence 344556667899999999999999999986 5799999999999999999975 3 889999999999999987 343
Q ss_pred ccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCc
Q 003065 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTL 266 (851)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 266 (851)
++++++|++|++++|++++ +| ++.+++|++|++++|++++. + +..+++|++|++++|+..+.+ .+..+++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 8889999999999999986 44 88889999999999999864 3 788889999999999665555 4778889
Q ss_pred ccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccC
Q 003065 267 LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE 346 (851)
Q Consensus 267 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~ 346 (851)
|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 9999999999886 44 77888889999999988865 37788888888888888887 45 77888888888888
Q ss_pred CcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCC
Q 003065 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS 426 (851)
Q Consensus 347 N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 426 (851)
|++++. | +..+++|+.|++++|+ |+.|++++|.+.+.+|
T Consensus 243 N~l~~~-------------------------~--~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 243 NPLTEL-------------------------D--VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSCC-------------------------C--CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE
T ss_pred CcCCCc-------------------------C--HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc
Confidence 888742 1 2345678888887764 4578888888877666
Q ss_pred cccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccc
Q 003065 427 PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCAR 506 (851)
Q Consensus 427 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 506 (851)
++.+++|+.|++++|.+.+.+|. ...+|+.|++++| ++|+.|+|++|+|++. + ++.+++
T Consensus 282 --~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~ 340 (457)
T 3bz5_A 282 --AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTK 340 (457)
T ss_dssp --CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTT
T ss_pred --ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCc
Confidence 46778899999999988877774 3456777777666 6899999999999984 3 999999
Q ss_pred cceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccc
Q 003065 507 IVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 507 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
|+.|++++|+|++ ++.|..|++++|+++|. + .+ .+..+|+++|+++|.||..+.
T Consensus 341 L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-~----~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 341 LKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-G----QTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp CSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-E----EEEECCCBCCBTTBEEEECCTTCB
T ss_pred CcEEECCCCCCCC--------ccccccccccCCcEEec-c----eeeecCccccccCcEEEEcChhHh
Confidence 9999999999996 24677889999999986 2 33 688899999999999997654
No 32
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.2e-40 Score=373.12 Aligned_cols=346 Identities=26% Similarity=0.359 Sum_probs=190.5
Q ss_pred CCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceee
Q 003065 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (851)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 174 (851)
.+++++.|+++++.++. +| .+..+++|++|+|++|.+++.++ +..+++|++|++++|.+++..+ +.++++|++|+
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 45667777777777653 44 36667777777777777766655 6777777777777777765444 66666666666
Q ss_pred cccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCcc
Q 003065 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (851)
Q Consensus 175 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 254 (851)
+++|.+. .+|. +.++++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+..+ +.++++|++|++++|.++
T Consensus 119 L~~n~l~--~~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQIT--DIDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCC--CCGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCC--CChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 6666665 3333 6666666666666666663 22 35666666666664 34433222 556666666666666655
Q ss_pred CcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccC
Q 003065 255 GELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLG 334 (851)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 334 (851)
+. ..+..+++|++|++++|++.+..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 32 235555666666666666554433 44555566666665555532 234445555555555555544333 44
Q ss_pred CCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceE
Q 003065 335 RYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGML 414 (851)
Q Consensus 335 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 414 (851)
.+++|+.|++++|++++.. + +..+++|++|++++|++++..| +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~------------------------~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNIS------------------------P--LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp TCTTCSEEECCSSCCCCCG------------------------G--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred cCCCCCEEECCCCccCccc------------------------c--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 4455555555555444210 1 3344455555555555554333 4445555555
Q ss_pred EecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCccc
Q 003065 415 DFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (851)
Q Consensus 415 ~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (851)
++++|++++..+ +..+++|+.|++++|++++. ..+..+++|++|++++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 555555554433 34455555555555555432 234455555555555555554444 455555555555555554
Q ss_pred C
Q 003065 495 G 495 (851)
Q Consensus 495 ~ 495 (851)
+
T Consensus 389 ~ 389 (466)
T 1o6v_A 389 N 389 (466)
T ss_dssp C
T ss_pred C
Confidence 3
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.6e-39 Score=371.17 Aligned_cols=355 Identities=27% Similarity=0.382 Sum_probs=215.4
Q ss_pred CcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCc
Q 003065 107 NVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP 186 (851)
Q Consensus 107 n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p 186 (851)
+.+.+.++. ..+++|+.|++++|.+.. +|.+..+++|++|||++|.+++..+ +.++++|++|++++|.+. .++
T Consensus 34 ~~~~~~i~~--~~l~~l~~L~l~~~~i~~-l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~--~~~ 106 (466)
T 1o6v_A 34 TNVTDTVSQ--TDLDQVTTLQADRLGIKS-IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA--DIT 106 (466)
T ss_dssp SSTTSEECH--HHHHTCCEEECCSSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC--CCG
T ss_pred cccccccCh--hHhccccEEecCCCCCcc-CcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccc--cCh
Confidence 344444432 457789999999999876 4568889999999999999886544 888888888888888886 444
Q ss_pred ccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCc
Q 003065 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTL 266 (851)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 266 (851)
. ++++++|++|++++|++++..+ +.++++|++|++++|++++. + .+..+++|++|+++ |.+.+.. .+.++++
T Consensus 107 ~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~ 178 (466)
T 1o6v_A 107 P-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTT 178 (466)
T ss_dssp G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTT
T ss_pred h-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCC
Confidence 4 8888888888888888875433 77888888888888888743 3 47777788888875 4454332 2667777
Q ss_pred ccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccC
Q 003065 267 LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE 346 (851)
Q Consensus 267 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~ 346 (851)
|++|++++|++++. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++
T Consensus 179 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 179 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 252 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCC
Confidence 77777777777643 236666677777777766665443 45555566666655555532 2344455555555555
Q ss_pred CcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCC
Q 003065 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS 426 (851)
Q Consensus 347 N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 426 (851)
|++++.. | +..+++|++|++++|++++..| +..+++|+.|++++|++++..+
T Consensus 253 n~l~~~~------------------------~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 253 NQISNLA------------------------P--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp SCCCCCG------------------------G--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG
T ss_pred Cccccch------------------------h--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh
Confidence 5444211 1 3334455555555555553332 4444555555555555544332
Q ss_pred cccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccc
Q 003065 427 PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCAR 506 (851)
Q Consensus 427 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 506 (851)
+..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++
T Consensus 305 --------------------------~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~ 354 (466)
T 1o6v_A 305 --------------------------ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTN 354 (466)
T ss_dssp --------------------------GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred --------------------------hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCC
Confidence 4444455555555555544433 44445555555555555433 23444555
Q ss_pred cceeeccCcccccccCCCccccccCCeEeCCCCccc
Q 003065 507 IVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (851)
Q Consensus 507 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (851)
|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 355 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 355 INWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred CCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 5555555555554444 445555555555555555
No 34
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=373.68 Aligned_cols=345 Identities=17% Similarity=0.176 Sum_probs=290.5
Q ss_pred CccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCC
Q 003065 220 GTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKN 299 (851)
Q Consensus 220 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 299 (851)
+.++.++++++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|++++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45777777777 5666553 57888888888888777788888888888888888888777888888888888888888
Q ss_pred ccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccc
Q 003065 300 NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPN 379 (851)
Q Consensus 300 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~ 379 (851)
++++..+..|.++++|++|++++|++++..|..|..+++|+.|++++|++++ ..|.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------~~~~ 146 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY------------------------ISHR 146 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE------------------------ECTT
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccce------------------------eChh
Confidence 8886666667888888888888888887777788888888888888887764 3345
Q ss_pred cccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCC
Q 003065 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (851)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 459 (851)
.|..+++|++|+|++|++++..+..+..+++|+.|++++|++.+..+..|..+++|+.|++++|.+.+.+|..+....+|
T Consensus 147 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 147 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 67778889999999999987777778889999999999999998888889999999999999998888888877777899
Q ss_pred cEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCC
Q 003065 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGN 539 (851)
Q Consensus 460 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (851)
+.|+|++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 99999999999766678999999999999999999888889999999999999999999999999999999999999999
Q ss_pred ccccccCcccccc-cceEEeCcCCcccccCCcccccCCC-CccccCCCCCCCCc
Q 003065 540 KLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMGG-DGAFAGNEGLCLDQ 591 (851)
Q Consensus 540 ~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~~-~~~~~gn~~lc~~~ 591 (851)
++++..+..+..+ .|+.|++++|+|.|.++..|..... ...+.++...|..|
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 9997666677777 8999999999999999877765443 35677888888766
No 35
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=367.79 Aligned_cols=350 Identities=17% Similarity=0.135 Sum_probs=199.9
Q ss_pred ceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeec
Q 003065 171 VSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYA 250 (851)
Q Consensus 171 ~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~ 250 (851)
+.++.+++.++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~--~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFV--AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCS--SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC--cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 45666666665 5666543 4677777777777766666777777777777777777766666777777777777777
Q ss_pred cCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCC
Q 003065 251 NNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP 330 (851)
Q Consensus 251 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 330 (851)
|+++...+..|.++++|++|+|++|++.+..|..|.++++|+.|++++|.+++..+..|.++++|+.|++++|++++..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 77765555556666777777777776666666666666666666666666665555566666666666666666655444
Q ss_pred CccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccc
Q 003065 331 ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPN 410 (851)
Q Consensus 331 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 410 (851)
..+..+++|+.|++++|.+.+ ..+..|..+++|++|++++|.+.+.+|.......+
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~------------------------~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~ 225 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINA------------------------IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 225 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCE------------------------ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCC
T ss_pred hHhcccCCCcEEeCCCCcCcE------------------------eChhhcccCcccceeeCCCCccccccCcccccCcc
Confidence 445555555555555555442 22234455556666666666555555554444445
Q ss_pred cceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecC
Q 003065 411 VGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEE 490 (851)
Q Consensus 411 L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 490 (851)
|+.|++++|++++.++..+..+ ++|+.|+|++|.+++..+..|..+++|+.|+|++
T Consensus 226 L~~L~l~~n~l~~~~~~~~~~l------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 226 LTSLSITHCNLTAVPYLAVRHL------------------------VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CSEEEEESSCCCSCCHHHHTTC------------------------TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred ccEEECcCCcccccCHHHhcCc------------------------cccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 5555555555554443444444 4444444444444444444445555555555555
Q ss_pred CcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccccceEEeCcCCcccccCCc
Q 003065 491 NALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVPL 570 (851)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~L~~l~ls~N~l~~~~p~ 570 (851)
|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.-+.....-....+++..+...|..|.
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 55555445555555555555555555554444445555555555555555553322111000122234455666666664
Q ss_pred cc
Q 003065 571 DF 572 (851)
Q Consensus 571 ~~ 572 (851)
.+
T Consensus 362 ~~ 363 (477)
T 2id5_A 362 FV 363 (477)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-37 Score=346.49 Aligned_cols=280 Identities=14% Similarity=0.132 Sum_probs=184.1
Q ss_pred CCCCCCCCCCCc-ccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEec
Q 003065 50 LDSWKESADSPC-GFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNV 128 (851)
Q Consensus 50 l~sW~~~~~~~c-~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 128 (851)
+++|... .+|| .|.+..|....-+| ............-..++++++|++++|.++...+..|..+++|++|+|
T Consensus 3 ~~~~~~~-~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 3 VKPRQPE-YKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNL 76 (390)
T ss_dssp ----CCE-ECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEEC
T ss_pred cCCCCCc-cceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEEC
Confidence 5789887 4455 55555553222111 222222222233345789999999999998543345789999999999
Q ss_pred ccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCccc-ccCCCCCCeEeccccccc
Q 003065 129 TGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPES-IGNLKNLTYLFLAHCNLR 206 (851)
Q Consensus 129 s~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~-~~~l~~L~~L~L~~n~l~ 206 (851)
++|.+++.++. +..+++|++|+|++|.+++..|..|.++++|++|++++|.+. .+|.. +.++++|++|++++|+++
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L~L~~n~l~ 154 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLTTLSMSNNNLE 154 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC--cCCHHHhcCCCCCcEEECCCCccC
Confidence 99999888774 899999999999999999888888889999999999999886 56655 578888889999888888
Q ss_pred ccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCcccc
Q 003065 207 GRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIG 286 (851)
Q Consensus 207 ~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 286 (851)
+..|..|.++++|++|++++|++++. .+..+++|++|++++|.+++. ...++|++|++++|++... |..
T Consensus 155 ~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~-- 223 (390)
T 3o6n_A 155 RIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP-- 223 (390)
T ss_dssp BCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--
T ss_pred ccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--
Confidence 77777888888888888888888754 356667788888888877632 2345677777777777633 322
Q ss_pred CcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCccc
Q 003065 287 NLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (851)
Q Consensus 287 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 350 (851)
..++|+.|++++|++++. ..+..+++|++|++++|++++..|..+..+++|+.|+|++|+++
T Consensus 224 ~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 285 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285 (390)
T ss_dssp CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC
T ss_pred ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc
Confidence 234566666666666532 23444555555555555554444444444444444444444443
No 37
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.2e-37 Score=342.92 Aligned_cols=334 Identities=18% Similarity=0.192 Sum_probs=207.2
Q ss_pred CCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEe
Q 003065 192 LKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (851)
Q Consensus 192 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 271 (851)
+++++.|++++|.++...+..|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46677777777777644444456667777777777777665556666666677777776666666666666666666666
Q ss_pred cccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccc
Q 003065 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (851)
Q Consensus 272 Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 351 (851)
|++|+++...+..|.++++|++|++++|++++..|..|..+++|++|++++|++++. .+..+++|+.|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 666666643333456666666666666666655555566666666666666665543 23344555555555555441
Q ss_pred cCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCccccc
Q 003065 352 SFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (851)
Q Consensus 352 ~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 431 (851)
. ...++|++|++++|.++.. |.. .
T Consensus 201 ~-----------------------------~~~~~L~~L~l~~n~l~~~-~~~--------------------------~ 224 (390)
T 3o6n_A 201 L-----------------------------AIPIAVEELDASHNSINVV-RGP--------------------------V 224 (390)
T ss_dssp E-----------------------------ECCSSCSEEECCSSCCCEE-ECC--------------------------C
T ss_pred c-----------------------------CCCCcceEEECCCCeeeec-ccc--------------------------c
Confidence 0 1112455555555555422 221 1
Q ss_pred CCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceee
Q 003065 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (851)
Q Consensus 432 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (851)
.++|+.|++++|++++. ..+..+++|++|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 301 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEE
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEE
Confidence 24555566666665532 356666666666666666666666666666777777777777663 455556667777777
Q ss_pred ccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccccCCCCccccCCCCCCCC
Q 003065 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEGLCLD 590 (851)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~gn~~lc~~ 590 (851)
|++|+++ .+|..+..+++|+.|+|++|+++ .+| +..+ .|+.|++++|+|.|.....+........+.+++..|..
T Consensus 302 L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~-~~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 302 LSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCC--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred CCCCcce-ecCccccccCcCCEEECCCCccc-eeC--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceecc
Confidence 7777777 45666777777888888888877 344 4445 67888888888888776555443335566777777865
Q ss_pred c
Q 003065 591 Q 591 (851)
Q Consensus 591 ~ 591 (851)
+
T Consensus 378 ~ 378 (390)
T 3o6n_A 378 D 378 (390)
T ss_dssp T
T ss_pred c
Confidence 4
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-37 Score=363.27 Aligned_cols=334 Identities=18% Similarity=0.175 Sum_probs=240.9
Q ss_pred CCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEe
Q 003065 192 LKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (851)
Q Consensus 192 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 271 (851)
+++++.|++++|.+....+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 57889999999999876666678889999999999999887778888889999999999988888778888888888888
Q ss_pred cccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccc
Q 003065 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (851)
Q Consensus 272 Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 351 (851)
|++|.+++..+..|.++++|++|++++|.+++..|..|+.+++|++|++++|++++.. ++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 8888888665566788888888888888888777777888888888888888777542 4455667777777776652
Q ss_pred cCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCccccc
Q 003065 352 SFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (851)
Q Consensus 352 ~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 431 (851)
. ...++|+.|++++|.++...+ .+ .
T Consensus 207 l-----------------------------~~~~~L~~L~ls~n~l~~~~~-~~--~----------------------- 231 (597)
T 3oja_B 207 L-----------------------------AIPIAVEELDASHNSINVVRG-PV--N----------------------- 231 (597)
T ss_dssp E-----------------------------ECCTTCSEEECCSSCCCEEEC-SC--C-----------------------
T ss_pred c-----------------------------cCCchhheeeccCCccccccc-cc--C-----------------------
Confidence 1 112346666666666653222 11 1
Q ss_pred CCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceee
Q 003065 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (851)
Q Consensus 432 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (851)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|+.+++|+.|+|++|++++ +|..++.+++|+.|+
T Consensus 232 -~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 232 -VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 307 (597)
T ss_dssp -SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEE
T ss_pred -CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEE
Confidence 345555555555553 2455666666666666666666666666666667777777776664 455566677777777
Q ss_pred ccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccccCCCCccccCCCCCCCC
Q 003065 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEGLCLD 590 (851)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~gn~~lc~~ 590 (851)
|++|.++ .+|..+..+++|+.|+|++|++++ +| +..+ .|+.|++++|+|.|.++..+........+.+++..|+.
T Consensus 308 Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~-~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 308 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCCC-ccCcccccCCCCCEEECCCCCCCC-cC--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 7777777 566677777888888888888874 33 3444 78888888888888876665544335667888889986
Q ss_pred c
Q 003065 591 Q 591 (851)
Q Consensus 591 ~ 591 (851)
+
T Consensus 384 ~ 384 (597)
T 3oja_B 384 D 384 (597)
T ss_dssp T
T ss_pred c
Confidence 4
No 39
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.6e-37 Score=328.17 Aligned_cols=168 Identities=28% Similarity=0.430 Sum_probs=152.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|++++++++|||||+++++|++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4699999999999999999999999999999998643 45677899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
|||+||+|.+++.+. ..+++..+..++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+...
T Consensus 112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999864 35889999999999999999999 7899999999999999999999999999999876
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.........+++||+.|||||
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPE 204 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPE 204 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHH
T ss_pred CCCCcccccCcccCcccCCHH
Confidence 554444455678999999998
No 40
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-36 Score=358.18 Aligned_cols=348 Identities=17% Similarity=0.221 Sum_probs=225.0
Q ss_pred CCCCCCCCCCCCCCcc----cceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCC
Q 003065 47 HGVLDSWKESADSPCG----FSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSN 122 (851)
Q Consensus 47 ~~~l~sW~~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 122 (851)
...+++|.++ .+||. |.++.|+. .++....... .+..-..+.+++.|++++|.++...+..|+.+++
T Consensus 6 ~~~l~~~~~~-~~C~~~~~~~~c~~~~~------~i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~ 76 (597)
T 3oja_B 6 RYNVKPRQPE-YKCIDSNLQYDCVFYDV------HIDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 76 (597)
T ss_dssp -----CCCSE-ECCCCC--CCSEEECSC------EECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCC
T ss_pred cccccCCCCC-CcCcccCcCceeEecCc------eecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCC
Confidence 3457889887 45552 66666642 1222222221 1122234788999999999998655556889999
Q ss_pred CceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCccc-ccCCCCCCeEec
Q 003065 123 LKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPES-IGNLKNLTYLFL 200 (851)
Q Consensus 123 L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~-~~~l~~L~~L~L 200 (851)
|++|+|++|.+++.++. ++.+++|++|+|++|.+++..|..|.++++|++|+|++|.+. .+|.. |+++++|++|+|
T Consensus 77 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEEC
T ss_pred CcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC--CCCHHHhccCCCCCEEEe
Confidence 99999999999988774 899999999999999999888888888888888888888886 45554 578888888888
Q ss_pred ccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCC
Q 003065 201 AHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (851)
Q Consensus 201 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (851)
++|.+++..|..|.++++|++|+|++|++++. .+..+++|+.|++++|.+++ +...++|+.|++++|.+...
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~ 226 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV 226 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc
Confidence 88888877777788888888888888888754 24556677777777777663 22345666777777666532
Q ss_pred CCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhh
Q 003065 281 LPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEK 360 (851)
Q Consensus 281 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 360 (851)
|..+ .++|+.|++++|.+++ +..+..+++|+.|+|++|.+++..|
T Consensus 227 -~~~~--~~~L~~L~L~~n~l~~--------------------------~~~l~~l~~L~~L~Ls~N~l~~~~~------ 271 (597)
T 3oja_B 227 -RGPV--NVELTILKLQHNNLTD--------------------------TAWLLNYPGLVEVDLSYNELEKIMY------ 271 (597)
T ss_dssp -ECSC--CSCCCEEECCSSCCCC--------------------------CGGGGGCTTCSEEECCSSCCCEEES------
T ss_pred -cccc--CCCCCEEECCCCCCCC--------------------------ChhhccCCCCCEEECCCCccCCCCH------
Confidence 2211 1345555555555543 2344555555555555555543322
Q ss_pred cchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEec
Q 003065 361 RKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVL 440 (851)
Q Consensus 361 ~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L 440 (851)
..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|+|
T Consensus 272 ------------------~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 272 ------------------HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYL 331 (597)
T ss_dssp ------------------GGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEEC
T ss_pred ------------------HHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEEC
Confidence 233444555555555555553 34444555666666666666653 3444555666666666
Q ss_pred CCCcceeeCCcccccCCCCcEEeccCccccC
Q 003065 441 QNNRFSGELPSELGRLTNLERLILTNNNFSG 471 (851)
Q Consensus 441 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 471 (851)
++|.+++. | +..+++|+.|++++|++.+
T Consensus 332 ~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 332 DHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 66666533 2 5566777777777777764
No 41
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.4e-37 Score=335.50 Aligned_cols=280 Identities=17% Similarity=0.212 Sum_probs=189.7
Q ss_pred CCCchhhHHHHHHHHHhc-CCCCCCCCCCC---CCCCCCcccceeEecC--------CCCceEEEecccCCcceecCccc
Q 003065 26 SLSLNVETQALIQFKSKL-KDPHGVLDSWK---ESADSPCGFSGITCDS--------VTGRVTEISFDNKSLSGEISSSI 93 (851)
Q Consensus 26 ~~~~~~~~~aLl~fk~~~-~~~~~~l~sW~---~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~g~i~~~l 93 (851)
..+..+|++||++||+++ .|+.+.+.+|. ....++|.|.|++|+. ...+|+.|+|+++.++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 346789999999999999 57888889994 3347889999999952 3468899999999998 788889
Q ss_pred cCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCcccccee
Q 003065 94 SALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (851)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 173 (851)
+.+++|++|+|++|.++ .+|..|+++++|++|+|++|.++..++.++.+++|++|+|++|++.+.+|..+...
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------ 173 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLAST------ 173 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE------
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhc------
Confidence 99999999999999998 88888999999999999999988555558888999999999988888888766540
Q ss_pred ecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCc
Q 003065 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNL 253 (851)
Q Consensus 174 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l 253 (851)
.++..+.++++|++|+|++|+++ .+|..+.++++|++|+|++|++++ +|..+..+++|++|+|++|++
T Consensus 174 ----------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~ 241 (328)
T 4fcg_A 174 ----------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTA 241 (328)
T ss_dssp ----------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTT
T ss_pred ----------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcc
Confidence 11122334455555555555555 445555555555555555555552 333455555555555555555
Q ss_pred cCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcC
Q 003065 254 TGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRF 325 (851)
Q Consensus 254 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 325 (851)
.+.+|..++.+++|++|+|++|.+.+.+|..+.++++|++|++++|++.+.+|..++.+++|+.+++..|.+
T Consensus 242 ~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 242 LRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred hhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 555555555555555555555555555555555555555555555555555555555555555555554444
No 42
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3e-37 Score=331.64 Aligned_cols=169 Identities=22% Similarity=0.378 Sum_probs=143.9
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
+++|++.+.||+|+||+||+|+++.+++.||||++... ...+.+.+|++++++++|||||++++++++++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 45899999999999999999999999999999998654 23567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
|||+||+|.+++... ....+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+...
T Consensus 103 Ey~~gg~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp ECCTTCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred eCCCCCcHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 999999999999764 2345788889999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
... ......+||+.|||||
T Consensus 177 ~~~--~~~~~~~GT~~YmAPE 195 (350)
T 4b9d_A 177 STV--ELARACIGTPYYLSPE 195 (350)
T ss_dssp HHH--HHHHHHHSCCTTCCHH
T ss_pred CCc--ccccccCCCccccCHH
Confidence 321 1223467999999998
No 43
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-36 Score=325.40 Aligned_cols=165 Identities=27% Similarity=0.431 Sum_probs=148.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
..|+..+.||+|+||+||+|+++.+++.||||++... ...+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 3688899999999999999999999999999998543 34566889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 833 (851)
+||+|.+++.+. .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 154 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 999999998652 4889999999999999999999 7899999999999999999999999999998775443
Q ss_pred CcccccccccccccccCC
Q 003065 834 KVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 834 ~~~~~~~~~gt~~Y~APE 851 (851)
. ...+.+||+.|||||
T Consensus 225 ~--~~~~~~GTp~YmAPE 240 (346)
T 4fih_A 225 P--RRKSLVGTPYWMAPE 240 (346)
T ss_dssp C--CBCCCCSCGGGCCHH
T ss_pred C--cccccccCcCcCCHH
Confidence 2 234578999999998
No 44
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.8e-35 Score=320.25 Aligned_cols=305 Identities=22% Similarity=0.318 Sum_probs=147.6
Q ss_pred CCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEE
Q 003065 191 NLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEF 270 (851)
Q Consensus 191 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 270 (851)
.+++|++|++++|.+.. +| .+..+++|++|++++|++++..+ +..+++|++|++++|.++. + +.+..+++|++|
T Consensus 42 ~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L 115 (347)
T 4fmz_A 42 ELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNLREL 115 (347)
T ss_dssp HHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEE
T ss_pred hcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEE
Confidence 34444455555544442 22 24444455555555555543222 4455555555555555543 2 234555555555
Q ss_pred ecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCccc
Q 003065 271 DISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (851)
Q Consensus 271 ~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 350 (851)
++++|++.+. +. +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|++.
T Consensus 116 ~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 116 YLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp ECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred ECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 5555555532 22 4555555555555554332222 24455555555555555543322 445555555555555544
Q ss_pred ccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccc
Q 003065 351 GSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIG 430 (851)
Q Consensus 351 ~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 430 (851)
+. + . +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +.
T Consensus 191 ~~-~------------------------~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~ 240 (347)
T 4fmz_A 191 DI-S------------------------P-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LA 240 (347)
T ss_dssp CC-G------------------------G-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GT
T ss_pred cc-c------------------------c-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hh
Confidence 21 0 1 3334455555555555553333 4445555555555555554333 44
Q ss_pred cCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCccccccccee
Q 003065 431 LSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDL 510 (851)
Q Consensus 431 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 510 (851)
.+++|+.|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..|..++.+++|+.|
T Consensus 241 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 241 NLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp TCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred cCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 455555555555555432 2345555555555555555533 234555555555555555555555555555555555
Q ss_pred eccCcccccccCCCccccccCCeEeCCCCccc
Q 003065 511 NLARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (851)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (851)
++++|++++..| +..+++|+.|++++|+++
T Consensus 317 ~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 317 FLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EccCCccccccC--hhhhhccceeehhhhccc
Confidence 555555554444 455555555555555543
No 45
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.4e-36 Score=312.28 Aligned_cols=166 Identities=30% Similarity=0.440 Sum_probs=135.0
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
.+++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|++++++++|||||++++++++++..|+
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 467899999999999999999999999999999998643 335678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+ +|+|.+++.++ ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 91 vmEy~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~ 161 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp EEECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred EEeCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCee
Confidence 99999 68999999763 45899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ..+.+||+.|||||
T Consensus 162 ~~~~~~---~~~~~GT~~Y~APE 181 (275)
T 3hyh_A 162 MTDGNF---LKTSCGSPNYAAPE 181 (275)
T ss_dssp ----------------CTTSCHH
T ss_pred cCCCCc---cCCeeECcccCChh
Confidence 654332 23468999999998
No 46
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.5e-36 Score=320.19 Aligned_cols=173 Identities=28% Similarity=0.405 Sum_probs=146.2
Q ss_pred cCCccCCeecccCcEEEEEEEEc-----CCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
.+|...+.||+|+||+||+|++. .++..||||++... ...++|.+|++++++++|||||++++++.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 36788899999999999999875 35778999999654 345679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhh--------hCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEE
Q 003065 749 VLEYMPNGNLFQALHKRV--------KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 820 (851)
|||||++|+|.++++... ......++|..+.+++.|+|+||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999998642 123457999999999999999999999 789999999999999999999999
Q ss_pred eeecCccccCCCCCcccccccccccccccCC
Q 003065 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 821 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+|||+|+...............||+.|||||
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE 200 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 200 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHH
Confidence 9999998765543333333457999999998
No 47
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=327.13 Aligned_cols=165 Identities=27% Similarity=0.431 Sum_probs=148.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
..|+..+.||+|+||.||+|+++.+++.||||++... ...+.+.+|+++|++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4689999999999999999999999999999998643 34566889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 833 (851)
+||+|.++++.. .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+......
T Consensus 231 ~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 231 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 999999998642 4889999999999999999999 7899999999999999999999999999998775543
Q ss_pred CcccccccccccccccCC
Q 003065 834 KVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 834 ~~~~~~~~~gt~~Y~APE 851 (851)
. ...+.+||+.|||||
T Consensus 302 ~--~~~~~~GTp~YmAPE 317 (423)
T 4fie_A 302 P--RRKSLVGTPYWMAPE 317 (423)
T ss_dssp C--CBCCCEECTTTCCHH
T ss_pred c--cccccccCcCcCCHH
Confidence 2 234578999999998
No 48
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-34 Score=317.01 Aligned_cols=307 Identities=23% Similarity=0.363 Sum_probs=173.6
Q ss_pred CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccccccc
Q 003065 140 LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL 219 (851)
Q Consensus 140 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 219 (851)
+..+++|++|++++|.+.. ++ .+..+++|++|++++|.+. .+|. +..+++|++|++++|++++ + +.+.++++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~--~~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQIT--DISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC--CCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTC
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccc--cchh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcC
Confidence 4456666666776666653 22 2555666666666666554 3333 5555666666666665553 2 235555555
Q ss_pred CccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCC
Q 003065 220 GTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKN 299 (851)
Q Consensus 220 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 299 (851)
++|++++|++++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~--------------------- 168 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVK--------------------- 168 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCC---------------------
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcC---------------------
Confidence 555555555553222 4455555555555553332222 2444455555555555444
Q ss_pred ccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccc
Q 003065 300 NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPN 379 (851)
Q Consensus 300 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~ 379 (851)
+..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|.+.+..+
T Consensus 169 ---~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~------------------------- 216 (347)
T 4fmz_A 169 ---DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP------------------------- 216 (347)
T ss_dssp ---CCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-------------------------
T ss_pred ---Cchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-------------------------
Confidence 3222 4444555555555555543222 4555556666666655542111
Q ss_pred cccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCC
Q 003065 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (851)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 459 (851)
+..+++|++|++++|++++..+ +..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|
T Consensus 217 -~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L 289 (347)
T 4fmz_A 217 -VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQL 289 (347)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTC
T ss_pred -hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCC
Confidence 3344556666666666654333 55566666666666666553 3456666777777777777643 346677777
Q ss_pred cEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccc
Q 003065 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLS 518 (851)
Q Consensus 460 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 518 (851)
+.|++++|.+++..|..+..+++|+.|+|++|++++..| +..+++|+.|++++|.|+
T Consensus 290 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 290 NSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 777777777777777777777777777777777776555 677777777777777765
No 49
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-35 Score=310.28 Aligned_cols=161 Identities=29% Similarity=0.359 Sum_probs=140.0
Q ss_pred ccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEe----CCeeEEEE
Q 003065 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFLVL 750 (851)
Q Consensus 679 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 750 (851)
+..+.||+|+||+||+|.++.++..||||++... ...+.|.+|++++++++|||||+++++|++ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5667899999999999999999999999998643 235678999999999999999999999865 34579999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEEeCCCCCCEEEC-CCCceEEeeecCcc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLD-EDYEPKIADFGVAK 827 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGla~ 827 (851)
|||+||+|.+++.+. ..+++..+..++.||+.||+||| +++ ||||||||+|||++ .+|.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999864 35889999999999999999999 555 99999999999998 47899999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ...+.+||+.|||||
T Consensus 181 ~~~~~----~~~~~~GTp~YmAPE 200 (290)
T 3fpq_A 181 LKRAS----FAKAVIGTPEFMAPE 200 (290)
T ss_dssp GCCTT----SBEESCSSCCCCCGG
T ss_pred eCCCC----ccCCcccCccccCHH
Confidence 64432 233468999999999
No 50
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.1e-36 Score=320.33 Aligned_cols=172 Identities=24% Similarity=0.364 Sum_probs=138.5
Q ss_pred CCccCCeecccCcEEEEEEEEc-----CCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+|...+.||+|+||+||+|++. .++..||||++... ...++|.+|++++++++|||||++++++.+++..|+|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 5677889999999999999875 35778999999654 3456799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceE
Q 003065 750 LEYMPNGNLFQALHKRVKE----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 819 (851)
||||++|+|.++++..... ....++|..+..|+.|||+||+||| +++||||||||+|||+++++.+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEE
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcEE
Confidence 9999999999999864221 2346899999999999999999999 78999999999999999999999
Q ss_pred EeeecCccccCCCCCcccccccccccccccCC
Q 003065 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 820 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+|||+|+..............+||+.|||||
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE 230 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 230 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHH
T ss_pred EcccccceeccCCCcceecCcccccccccChh
Confidence 99999999775544333334567999999998
No 51
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.2e-35 Score=317.90 Aligned_cols=165 Identities=25% Similarity=0.291 Sum_probs=142.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccCC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 755 (851)
..|+..+.||+|+||+||+|+++.+++.||||++..+.. ..+|++++++++|||||++++++.+++..|+|||||+|
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 457788899999999999999999999999999975532 24799999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC-ceEEeeecCccccCCCCC
Q 003065 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAENSPK 834 (851)
Q Consensus 756 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~ 834 (851)
|+|.+++++. ..+++..+..++.||+.||+||| +++||||||||+|||++.+| .+||+|||+|+.......
T Consensus 135 g~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 135 GSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 9999999864 35899999999999999999999 88999999999999999988 699999999997754322
Q ss_pred c---ccccccccccccccCC
Q 003065 835 V---SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~---~~~~~~~gt~~Y~APE 851 (851)
. .....++||+.|||||
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE 226 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPE 226 (336)
T ss_dssp -------CCCCCCGGGCCHH
T ss_pred ccceecCCccccCccccCHH
Confidence 1 1223467999999998
No 52
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1e-35 Score=315.99 Aligned_cols=172 Identities=24% Similarity=0.389 Sum_probs=136.4
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCC-------
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGG------- 744 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 744 (851)
+.+|++.+.||+|+||+||+|+++.+++.||||++.... ..+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 457899999999999999999999999999999986442 3467889999999999999999999987544
Q ss_pred -----eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceE
Q 003065 745 -----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (851)
Q Consensus 745 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 819 (851)
..|+|||||++|+|.+++..+. .....++..+..++.|+++||+||| +++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEE
Confidence 3699999999999999998642 2234566778899999999999999 78999999999999999999999
Q ss_pred EeeecCccccCCCCCc----------ccccccccccccccCC
Q 003065 820 IADFGVAKIAENSPKV----------SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 820 l~DFGla~~~~~~~~~----------~~~~~~~gt~~Y~APE 851 (851)
|+|||+|+........ ...++.+||+.|||||
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE 200 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE 200 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHH
Confidence 9999999876543221 1223467999999998
No 53
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=314.64 Aligned_cols=165 Identities=33% Similarity=0.510 Sum_probs=136.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
+++...+.||+|+||+||+|++. ..||||+++.. ...+.|.+|++++++++|||||++++++.. +..|+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 36778899999999999999874 35999988543 235679999999999999999999998754 56899999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
||++|+|.++++.. ...+++..+..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred cCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 99999999999753 456899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
..........+||+.|||||
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE 204 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPE 204 (307)
T ss_dssp ---------CCCCTTSCCHH
T ss_pred CCcceeecccccCCCccCHH
Confidence 43333345568999999998
No 54
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.1e-35 Score=316.60 Aligned_cols=172 Identities=22% Similarity=0.300 Sum_probs=146.0
Q ss_pred CCccCCeecccCcEEEEEEEEc-----CCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
++++.+.||+|+||+||+|++. .+++.||||++... ...++|.+|+.++++++|||||++++++.+++..|+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4567889999999999999864 35678999998654 346789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc
Q 003065 749 VLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~ 817 (851)
|||||++|+|.+++..+... ....++|..+.+|+.|||+||+||| +++||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 99999999999999764221 1245899999999999999999999 789999999999999999999
Q ss_pred eEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 818 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+||+|||+|+...............||+.|||||
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE 217 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE 217 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHH
Confidence 9999999998765443333344567999999998
No 55
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-35 Score=314.24 Aligned_cols=166 Identities=31% Similarity=0.403 Sum_probs=138.8
Q ss_pred cCCccCCeecccCcEEEEEEEEc---CCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
++|++.+.||+|+||+||+|++. .+++.||||++.+. .....+.+|++++++++|||||++++++++++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47999999999999999999874 46788999998643 234467899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
|||||+||+|.+++.+. ..+++..+..++.|++.||+||| +++|+||||||+|||++.+|.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999864 35889999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ...+.+||+.|||||
T Consensus 176 ~~~~~~--~~~~~~GT~~YmAPE 196 (304)
T 3ubd_A 176 SIDHEK--KAYSFCGTVEYMAPE 196 (304)
T ss_dssp -----C--CCCSCCCCGGGCCHH
T ss_pred ccCCCc--cccccccCcccCCHH
Confidence 544322 233468999999998
No 56
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.9e-35 Score=314.76 Aligned_cols=249 Identities=27% Similarity=0.452 Sum_probs=179.1
Q ss_pred CCccEEEccCCccCC--CCCCCCCCcccccEEEecc-CcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHH
Q 003065 289 KNLTVFQCFKNNFSG--EFPSGFGDMRKLFAFSIYG-NRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLN 365 (851)
Q Consensus 289 ~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~ 365 (851)
.+++.|++++|++++ .+|..|+++++|++|++++ |.+.+.+|..++.+++|++|+|++|++++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-------------- 115 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG-------------- 115 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEE--------------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCC--------------
Confidence 356666666666666 5666666666666666663 66666666666666666666666665554
Q ss_pred HHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCC-CCCeEecCCCc
Q 003065 366 LLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLST-SLSQLVLQNNR 444 (851)
Q Consensus 366 l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~-~L~~L~Ls~N~ 444 (851)
.+|..|.++++|++|+|++|++++.+|..+..+++|++|++++|++++.+|..+..++ +|+.|+|++|+
T Consensus 116 ----------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 116 ----------AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp ----------ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred ----------cCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe
Confidence 3444556667777777777777777777777777777777777777777777777776 77888888888
Q ss_pred ceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCC
Q 003065 445 FSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRS 524 (851)
Q Consensus 445 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 524 (851)
+++.+|..+..++ |++|++++|.+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|.+
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 8777777777776 88888888888777777777788888888888887766555 677777888888888887777777
Q ss_pred ccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcc
Q 003065 525 LSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQL 564 (851)
Q Consensus 525 ~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l 564 (851)
+..+++|+.|+|++|+++|.+|.. ..+ .|+.+++++|+.
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~ 303 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKC 303 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSE
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCC
Confidence 777777888888888887777765 445 666666666663
No 57
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.2e-33 Score=307.72 Aligned_cols=135 Identities=19% Similarity=0.221 Sum_probs=67.5
Q ss_pred ccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEecc
Q 003065 386 TIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (851)
Q Consensus 386 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 465 (851)
+|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+++
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECC
Confidence 4555556666555555555555555555555555555555555555555555555555555 445555555555555555
Q ss_pred CccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccc--cccCCCccccccCCeEeCCCC
Q 003065 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLS--GNIPRSLSLLSSLNALNLSGN 539 (851)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N 539 (851)
+|++++..+..|..... -.....|+.|++++|.++ +..|..|..+++|+.+++++|
T Consensus 273 ~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 273 TNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred CCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 55555444444433200 000133445555555544 344445555555555555555
No 58
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.6e-33 Score=304.94 Aligned_cols=288 Identities=20% Similarity=0.286 Sum_probs=170.0
Q ss_pred cCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccC
Q 003065 219 LGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFK 298 (851)
Q Consensus 219 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~ 298 (851)
++.+++++|.++ .+|..+. ++|++|++++|.+++..|..|.++++|++|++++|++++..|..|.++++|++|++++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444444444444 3333332 3455555555555544455555556666666666665555555566666666666666
Q ss_pred CccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCcccccc
Q 003065 299 NNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVP 378 (851)
Q Consensus 299 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p 378 (851)
|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|+++.. +..|
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------------~~~~ 166 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS----------------------GFEP 166 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGG----------------------GSCT
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccC----------------------CCCc
Confidence 6655 3343332 5566666666666655555566666666666666666420 1223
Q ss_pred ccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCC
Q 003065 379 NSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTN 458 (851)
Q Consensus 379 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 458 (851)
..+..+ +|++|++++|++++ +|..+. + +|+.|++++|++++..|..|..+++
T Consensus 167 ~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~------------------------~L~~L~l~~n~i~~~~~~~l~~l~~ 218 (332)
T 2ft3_A 167 GAFDGL-KLNYLRISEAKLTG-IPKDLP--E------------------------TLNELHLDHNKIQAIELEDLLRYSK 218 (332)
T ss_dssp TSSCSC-CCSCCBCCSSBCSS-CCSSSC--S------------------------SCSCCBCCSSCCCCCCTTSSTTCTT
T ss_pred ccccCC-ccCEEECcCCCCCc-cCcccc--C------------------------CCCEEECCCCcCCccCHHHhcCCCC
Confidence 444444 66667777766663 443322 3 4555555555555555555556666
Q ss_pred CcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccc------cccCC
Q 003065 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSL------LSSLN 532 (851)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~ 532 (851)
|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..++.+++|+.|++++|++++..+..|.. ...|+
T Consensus 219 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~ 297 (332)
T 2ft3_A 219 LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYN 297 (332)
T ss_dssp CSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBS
T ss_pred CCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccccccccc
Confidence 666666666666555556666666666666666665 55666666666666666666666555555543 36799
Q ss_pred eEeCCCCccc--cccCcccccc-cceEEeCcCCc
Q 003065 533 ALNLSGNKLT--GSIPDNLMKL-KLSSIDLSENQ 563 (851)
Q Consensus 533 ~L~Ls~N~l~--g~ip~~l~~l-~L~~l~ls~N~ 563 (851)
.|++++|+++ +..|..+..+ .|+.+++++|+
T Consensus 298 ~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 298 GISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp EEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ceEeecCcccccccCcccccccchhhhhhccccc
Confidence 9999999998 5677778888 89999999985
No 59
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.7e-33 Score=303.51 Aligned_cols=131 Identities=21% Similarity=0.240 Sum_probs=65.8
Q ss_pred cccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEe
Q 003065 409 PNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHL 488 (851)
Q Consensus 409 ~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 488 (851)
++|++|++++|++++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 34444444444444444444444444555555555555444444555555555555555555 44445555555555555
Q ss_pred cCCcccCCCCCCccc------ccccceeeccCccccc--ccCCCccccccCCeEeCCCCc
Q 003065 489 EENALTGSIPNEMGD------CARIVDLNLARNSLSG--NIPRSLSLLSSLNALNLSGNK 540 (851)
Q Consensus 489 s~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 540 (851)
++|++++..+..|.. ...++.|++++|.+.. ..|..|..+.+++.++|++|+
T Consensus 271 ~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 271 HNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 555555444444432 2455566666666542 444566666667777776664
No 60
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.3e-34 Score=303.88 Aligned_cols=167 Identities=32% Similarity=0.419 Sum_probs=135.3
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHH-HHHHHHHHHHcCCCCccccEEEEEEeCC----eeEEEEe
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVK-VFAAEMEILGKIRHRNILKLYACLLKGG----SSFLVLE 751 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e 751 (851)
+|...+.||+|+||+||+|++ +|+.||||++......+ .++.|+..+.+++|||||++++++.+++ ..|+|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 567788999999999999988 58899999986554322 2334566667889999999999987654 5799999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD-----CSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
||++|+|.++++.. .++|..+.+++.|+++||+|||+. +.++||||||||+|||++.++.+||+|||+|
T Consensus 82 y~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999753 588999999999999999999943 1349999999999999999999999999999
Q ss_pred cccCCCCCcc--cccccccccccccCC
Q 003065 827 KIAENSPKVS--DYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~--~~~~~~gt~~Y~APE 851 (851)
+......... .....+||+.|||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE 182 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPE 182 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHH
T ss_pred ccccCCCCceeeecccccccccccCHH
Confidence 8775543221 223457999999998
No 61
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.3e-32 Score=299.16 Aligned_cols=287 Identities=21% Similarity=0.278 Sum_probs=202.3
Q ss_pred ccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEecc
Q 003065 243 LWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYG 322 (851)
Q Consensus 243 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 322 (851)
++.++++++.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..|..|+.+++|++|++++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 344444444444 2333322 3455555555555544444455555555555555555544455555555555555555
Q ss_pred CcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCcccc--c
Q 003065 323 NRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSG--K 400 (851)
Q Consensus 323 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~--~ 400 (851)
|+++ .+|..+. ++|++|++++|++++..+ ..|.++++|++|++++|.++. .
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~~~~ 162 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRK------------------------SVFNGLNQMIVVELGTNPLKSSGI 162 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCH------------------------HHHTTCTTCCEEECCSSCCCGGGB
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCH------------------------hHhcCCccccEEECCCCcCCccCc
Confidence 5555 2333332 566777777766653222 234556677777777777753 5
Q ss_pred cCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccC
Q 003065 401 IPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGAL 480 (851)
Q Consensus 401 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 480 (851)
.+..+..+++|++|++++|+++..+...+ ++|+.|++++|++++..|..|..+++|++|+|++|.+++..+..+..+
T Consensus 163 ~~~~~~~l~~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 163 ENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CTTGGGGCTTCCEEECCSSCCCSCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred ChhhccCCCCcCEEECCCCccccCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 66777788888888888888876544332 789999999999999989999999999999999999998888899999
Q ss_pred CcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCcccc------ccCCeEeCCCCcccc--ccCcccccc
Q 003065 481 RQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLL------SSLNALNLSGNKLTG--SIPDNLMKL 552 (851)
Q Consensus 481 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~g--~ip~~l~~l 552 (851)
++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|... ..|+.|++++|++.. ..|..+..+
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~ 318 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 318 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc
Confidence 99999999999998 889999999999999999999998777777543 789999999999973 456677777
Q ss_pred -cceEEeCcCCc
Q 003065 553 -KLSSIDLSENQ 563 (851)
Q Consensus 553 -~L~~l~ls~N~ 563 (851)
.++.+++++|+
T Consensus 319 ~~l~~l~L~~N~ 330 (330)
T 1xku_A 319 YVRAAVQLGNYK 330 (330)
T ss_dssp CCGGGEEC----
T ss_pred cceeEEEecccC
Confidence 89999999985
No 62
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3e-37 Score=352.27 Aligned_cols=86 Identities=28% Similarity=0.299 Sum_probs=42.0
Q ss_pred CCcEEeccCccccCC----CccccccCCcccEEEecCCcccCCCCCCccc-----ccccceeeccCccccc----ccCCC
Q 003065 458 NLERLILTNNNFSGK----IPSALGALRQLSSLHLEENALTGSIPNEMGD-----CARIVDLNLARNSLSG----NIPRS 524 (851)
Q Consensus 458 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~ 524 (851)
+|++|++++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++|++++ .+|..
T Consensus 314 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 393 (461)
T 1z7x_W 314 QLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAAT 393 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred cceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHH
Confidence 444444444444432 2333444455555555555544333332222 3455555555555554 45555
Q ss_pred ccccccCCeEeCCCCcccc
Q 003065 525 LSLLSSLNALNLSGNKLTG 543 (851)
Q Consensus 525 ~~~l~~L~~L~Ls~N~l~g 543 (851)
+..+++|+.|+|++|++++
T Consensus 394 l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 394 LLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHCCCCCEEECCSSSCCH
T ss_pred HHhCCCccEEECCCCCCCH
Confidence 5555556666666665553
No 63
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=4.6e-37 Score=350.69 Aligned_cols=386 Identities=16% Similarity=0.142 Sum_probs=276.6
Q ss_pred CCCCeEeccCcccCCCCccc-ccCccccceeecccccCCCC---CCcccccCCCCCCeEecccccccccCCcccc-ccc-
Q 003065 144 KNLEIFDLSINYFTGRFPRW-VVNLTQLVSLSIGDNVYDEA---EIPESIGNLKNLTYLFLAHCNLRGRIPESIS-ELR- 217 (851)
Q Consensus 144 ~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~---~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~- 217 (851)
++|++|||++|.++...... +..+++|++|++++|.+... .++..+..+++|++|+|++|+++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56888999999887544333 67888999999999888632 3466778888999999999988765444433 344
Q ss_pred ---ccCccccccccccc----cccccccCCCcccEEEeeccCccCcCCcCc-----CCCCcccEEecccccccCCC----
Q 003065 218 ---ELGTLDICRNKISG----EFPRSIRKLQKLWKIELYANNLTGELPAEL-----GNLTLLQEFDISSNQMYGKL---- 281 (851)
Q Consensus 218 ---~L~~L~L~~N~i~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~---- 281 (851)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+ ...++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 68889999988874 457788888888899998888875444332 23567888888888887643
Q ss_pred CccccCcCCccEEEccCCccCCCCCCCCC-----CcccccEEEeccCcCCCC----CCCccCCCCccceeeccCCccccc
Q 003065 282 PEEIGNLKNLTVFQCFKNNFSGEFPSGFG-----DMRKLFAFSIYGNRFSGP----FPENLGRYTALTDVDISENQFSGS 352 (851)
Q Consensus 282 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~ 352 (851)
+..+..+++|+.|++++|.+++..+..+. .+++|++|++++|.+++. ++..+..+++|++|++++|++++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 45566678888888888887654333332 245788888888888754 466666778888888888877643
Q ss_pred CchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccc----cCCcccCccccceEEecCCcCCCCCCcc
Q 003065 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGK----IPDGLWALPNVGMLDFGDNDFTGGISPL 428 (851)
Q Consensus 353 ~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 428 (851)
....++ +..+..+++|++|++++|++++. ++..+..+++|++|++++|++++..+..
T Consensus 243 ~~~~l~-------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 303 (461)
T 1z7x_W 243 GMAELC-------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 303 (461)
T ss_dssp HHHHHH-------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHH
T ss_pred HHHHHH-------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHH
Confidence 222111 12233567899999999998864 5777777889999999999887544433
Q ss_pred ccc-----CCCCCeEecCCCcceee----CCcccccCCCCcEEeccCccccCCCcccccc-----CCcccEEEecCCccc
Q 003065 429 IGL-----STSLSQLVLQNNRFSGE----LPSELGRLTNLERLILTNNNFSGKIPSALGA-----LRQLSSLHLEENALT 494 (851)
Q Consensus 429 ~~~-----~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~ 494 (851)
+.. .++|+.|+|++|.+++. ++..+..+++|++|++++|.+++..+..+.. .+.|+.|+|++|+++
T Consensus 304 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 304 LCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 332 36899999999998865 4666777899999999999988665554443 678999999999998
Q ss_pred C----CCCCCcccccccceeeccCcccccccCCCcc-----ccccCCeEeCCCCccccccCcc
Q 003065 495 G----SIPNEMGDCARIVDLNLARNSLSGNIPRSLS-----LLSSLNALNLSGNKLTGSIPDN 548 (851)
Q Consensus 495 ~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~g~ip~~ 548 (851)
+ .+|..+..+++|++|++++|++++.-...+. ...+|+.|++.++.+....++.
T Consensus 384 ~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~ 446 (461)
T 1z7x_W 384 DSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDR 446 (461)
T ss_dssp HHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHH
T ss_pred hhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHH
Confidence 6 7788888889999999999988864222221 1235666777766666444443
No 64
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-33 Score=306.62 Aligned_cols=173 Identities=31% Similarity=0.393 Sum_probs=146.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCC-----CcEEEEEEecccc---cHHHHHHHHHHHHcCCC-CccccEEEEEEe-CCe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKGD---GVKVFAAEMEILGKIRH-RNILKLYACLLK-GGS 745 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h-~niv~l~~~~~~-~~~ 745 (851)
++|++.+.||+|+||+||+|++... ++.||||++.... ..+.|.+|++++++++| ||||++++++.. ++.
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~ 143 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 143 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence 4688999999999999999998654 3579999986543 34678999999999965 899999999866 456
Q ss_pred eEEEEeccCCCCHHHHHHHhhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~ 814 (851)
.|+|||||++|+|.++++..... ....+++..+..++.|||+||+||| +++||||||||+|||+++
T Consensus 144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 220 (353)
T ss_dssp CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCC
Confidence 89999999999999999864321 1345899999999999999999999 789999999999999999
Q ss_pred CCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 815 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++.+||+|||+|+...............||+.|||||
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE 257 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 257 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHH
Confidence 9999999999999776554444445567999999998
No 65
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.98 E-value=1.4e-32 Score=315.36 Aligned_cols=165 Identities=25% Similarity=0.336 Sum_probs=144.7
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHH---HHHHHcCCCCccccEEEEEEeCCee
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAE---MEILGKIRHRNILKLYACLLKGGSS 746 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~ 746 (851)
+++|++.+.||+|+||+||+|+++.+++.||||++.+. .......+| +.+++.++|||||+++++|++.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999999999999999998543 223334444 5666778999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+|||||+||+|.+++.+. ..+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|
T Consensus 268 ylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEeccccee
Confidence 9999999999999999864 35889999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+...... ..+.+||+.|||||
T Consensus 340 ~~~~~~~----~~t~~GTp~YmAPE 360 (689)
T 3v5w_A 340 CDFSKKK----PHASVGTHGYMAPE 360 (689)
T ss_dssp EECSSCC----CCSCCSCGGGCCHH
T ss_pred eecCCCC----CCCccCCcCccCHH
Confidence 8775443 23468999999998
No 66
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.98 E-value=8.3e-33 Score=305.02 Aligned_cols=166 Identities=31% Similarity=0.428 Sum_probs=142.4
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEe------CCee
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK------GGSS 746 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~ 746 (851)
+|++.+.||+|+||+||+|+++.+++.||||++... ...+.+.+|+++|++++|||||++++++.. .+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 689999999999999999999999999999999654 234568899999999999999999998764 3578
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+|||||+ |+|.+++.. ...+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|
T Consensus 135 ~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeeccee
Confidence 99999995 689988864 346899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCC--cccccccccccccccCC
Q 003065 827 KIAENSPK--VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~--~~~~~~~~gt~~Y~APE 851 (851)
+....... .....+.+||+.|||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APE 232 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPE 232 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHH
T ss_pred eecccCccccccccccceeChHhcCHH
Confidence 87644321 22334578999999998
No 67
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.98 E-value=1.7e-32 Score=299.42 Aligned_cols=165 Identities=24% Similarity=0.362 Sum_probs=142.8
Q ss_pred cCCccCCeecccCcEEEEEEEEc---CCCcEEEEEEecccccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 751 (851)
+.|++.+.||+|+||+||+|+++ .+++.||||++.+.....++.+|+++++.+ +|||||+++++|.+++..|+|||
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 47999999999999999999875 457789999998877778889999999998 69999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC-CceEEeeecCccccC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKIAE 830 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~ 830 (851)
|+++|+|.+++. .+++..+..++.|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 101 ~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 101 YLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp CCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred CCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 999999999873 3788899999999999999999 7899999999999999876 799999999998654
Q ss_pred CCCC--------------------------cccccccccccccccCC
Q 003065 831 NSPK--------------------------VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~--------------------------~~~~~~~~gt~~Y~APE 851 (851)
.... .......+||++|||||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 216 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE 216 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHH
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 3321 01123467999999998
No 68
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=300.33 Aligned_cols=281 Identities=20% Similarity=0.286 Sum_probs=237.4
Q ss_pred CCCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCC
Q 003065 58 DSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSV 137 (851)
Q Consensus 58 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 137 (851)
.++|.|.|+ |+- ++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++.+
T Consensus 27 ~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 27 SLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 567999998 764 345555 5676655 58999999999999766668999999999999999999987
Q ss_pred CC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcc--cccCCCCCCeEecccc-cccccCCccc
Q 003065 138 PD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE--SIGNLKNLTYLFLAHC-NLRGRIPESI 213 (851)
Q Consensus 138 ~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~--~~~~l~~L~~L~L~~n-~l~~~~p~~~ 213 (851)
+. ++++++|++|||++|.+++..+..|.++++|++|++++|.+. .+|. .+.++++|++|++++| .+.+..+..|
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 170 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK--TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDF 170 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS--SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc--ccCchhhhccCCCCcEEECCCCccccccCHHHc
Confidence 76 999999999999999999776777999999999999999997 5665 7899999999999999 5777778889
Q ss_pred ccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCcccc---CcCC
Q 003065 214 SELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIG---NLKN 290 (851)
Q Consensus 214 ~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~ 290 (851)
.++++|++|++++|++++..|..|..+++|++|++++|+++...+..+..+++|++|++++|++++..+..+. ..+.
T Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~ 250 (353)
T 2z80_A 171 AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL 250 (353)
T ss_dssp TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCC
T ss_pred cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccch
Confidence 9999999999999999998899999999999999999999754444455689999999999999976665543 3567
Q ss_pred ccEEEccCCccCC----CCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCc
Q 003065 291 LTVFQCFKNNFSG----EFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (851)
Q Consensus 291 L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 354 (851)
++.++++++.+++ .+|..+..+++|+.|++++|+++...+..|..+++|++|+|++|++.+..|
T Consensus 251 l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 251 IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 8889999998875 356678889999999999999995444446899999999999999986544
No 69
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=3.9e-33 Score=302.33 Aligned_cols=289 Identities=17% Similarity=0.228 Sum_probs=208.2
Q ss_pred HHhcCCCCCCCCCCCCCC-CCCcccceeEecCCCC--ceEEEecccCCcceecCccc--cCCccCcEEeCCCCcccCccC
Q 003065 40 KSKLKDPHGVLDSWKESA-DSPCGFSGITCDSVTG--RVTEISFDNKSLSGEISSSI--SALQSLTVLSLPFNVLSGKLP 114 (851)
Q Consensus 40 k~~~~~~~~~l~sW~~~~-~~~c~w~gv~c~~~~~--~v~~l~l~~~~l~g~i~~~l--~~l~~L~~L~L~~n~l~~~~p 114 (851)
|.++.|+..++..|+..- .|||.|.++.|+.... .+. ...+.... .++..+ ...+.+++|+|++|.++ .+|
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~-~~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHH-HHHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchh-hhHHHHhcccccceeEEEccCCCch-hcC
Confidence 455566667888897632 5789999998843221 111 11111110 111111 12456677777777776 566
Q ss_pred cccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCC
Q 003065 115 LELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKN 194 (851)
Q Consensus 115 ~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~ 194 (851)
..++++++|++|+|++|.++..+..++.+++|++|+|++|.++ .+|..+.++++|++|++++|.+. +.+|..++.
T Consensus 98 ~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~-~~~p~~~~~--- 172 (328)
T 4fcg_A 98 DQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPEL-TELPEPLAS--- 172 (328)
T ss_dssp SCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTC-CCCCSCSEE---
T ss_pred hhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCc-cccChhHhh---
Confidence 6666666666666666666633333666666666666666655 44444545555555555444433 333333221
Q ss_pred CCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEeccc
Q 003065 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (851)
Q Consensus 195 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 274 (851)
. ..+..|.++++|++|+|++|+++ .+|..+.++++|++|+|++|++++ +|..+..+++|++|+|++
T Consensus 173 ---~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~ 238 (328)
T 4fcg_A 173 ---T---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRG 238 (328)
T ss_dssp ---E---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTT
T ss_pred ---c---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcC
Confidence 0 11223456999999999999999 889999999999999999999994 677899999999999999
Q ss_pred ccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccc
Q 003065 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (851)
Q Consensus 275 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 351 (851)
|.+.+.+|..+.++++|++|++++|++.+.+|..+..+++|++|++++|++.+.+|..++.+++|+.+++..|.+..
T Consensus 239 n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 239 CTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred CcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887763
No 70
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=1.7e-34 Score=340.33 Aligned_cols=377 Identities=14% Similarity=0.114 Sum_probs=209.2
Q ss_pred CCCCCCeEeccCcccCCCCcccccCc--cccceeeccccc-CCCCCCcccccCCCCCCeEeccccccccc----CCcccc
Q 003065 142 ALKNLEIFDLSINYFTGRFPRWVVNL--TQLVSLSIGDNV-YDEAEIPESIGNLKNLTYLFLAHCNLRGR----IPESIS 214 (851)
Q Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L~~N~-l~~~~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~ 214 (851)
.+++|++|+|++|.+++..+.++... .+|++|+|++|. +....++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45556666666665555445555442 336666666554 22112222334566666666666666544 222334
Q ss_pred cccccCcccccccccc----ccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEeccccccc---CCCCccccC
Q 003065 215 ELRELGTLDICRNKIS----GEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMY---GKLPEEIGN 287 (851)
Q Consensus 215 ~l~~L~~L~L~~N~i~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~l~~ 287 (851)
.+++|++|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+..+++|++|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 5566666666666665 2333444556666666666666663 4555666666666666643222 223344555
Q ss_pred cCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCC-CccCCCCccceeeccCCcccccCchhhhhhcchHHH
Q 003065 288 LKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP-ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNL 366 (851)
Q Consensus 288 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l 366 (851)
+++|+.|+++++.. +.+|..+..+++|++|++++|.+++... ..+..+++|+.|+++ |.+.+.
T Consensus 269 ~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~-------------- 332 (592)
T 3ogk_B 269 PRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDR-------------- 332 (592)
T ss_dssp CTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHH--------------
T ss_pred cccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHH--------------
Confidence 66666666665422 2445555566666666666666543222 234566667777776 333321
Q ss_pred HhccCCccccccccccCccccceeccc-----------cCccccccC-CcccCccccceEEecCCcCCCCCCccccc-CC
Q 003065 367 LALSNNFSGEVPNSYADCKTIQRLRIS-----------DNHLSGKIP-DGLWALPNVGMLDFGDNDFTGGISPLIGL-ST 433 (851)
Q Consensus 367 ~l~~n~~~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~ 433 (851)
.++..+..+++|++|+|+ .|.+++... .....+++|++|+++.|++++.....+.. ++
T Consensus 333 ---------~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~ 403 (592)
T 3ogk_B 333 ---------GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLK 403 (592)
T ss_dssp ---------HHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCC
T ss_pred ---------HHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCC
Confidence 111222344556666666 245543322 22234566666666666666544444443 66
Q ss_pred CCCeEecC----CCcceee-----CCcccccCCCCcEEeccCc--cccCCCccccc-cCCcccEEEecCCcccC-CCCCC
Q 003065 434 SLSQLVLQ----NNRFSGE-----LPSELGRLTNLERLILTNN--NFSGKIPSALG-ALRQLSSLHLEENALTG-SIPNE 500 (851)
Q Consensus 434 ~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~ 500 (851)
+|+.|+++ .|.+++. ++..+.++++|+.|++++| .+++..+..+. .+++|+.|+|++|++++ .++..
T Consensus 404 ~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 483 (592)
T 3ogk_B 404 NLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF 483 (592)
T ss_dssp SCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH
T ss_pred CCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH
Confidence 66666664 5566542 3334556777777777643 35544444443 36677777777777765 34444
Q ss_pred cccccccceeeccCcccccc-cCCCccccccCCeEeCCCCccccc
Q 003065 501 MGDCARIVDLNLARNSLSGN-IPRSLSLLSSLNALNLSGNKLTGS 544 (851)
Q Consensus 501 ~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~ 544 (851)
+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.
T Consensus 484 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 484 SRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 56677777777777777654 333345677788888888887754
No 71
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2e-31 Score=286.55 Aligned_cols=286 Identities=20% Similarity=0.243 Sum_probs=155.6
Q ss_pred CCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCC--
Q 003065 59 SPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGS-- 136 (851)
Q Consensus 59 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-- 136 (851)
+.|.|.+|+|+... ++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.++..
T Consensus 5 C~C~~~~l~c~~~~------------l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNSKG------------LT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCSSC------------CS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCCCC------------cc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 34899999997532 22 3444332 5677777777777743333467777777777777776543
Q ss_pred -CCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccc
Q 003065 137 -VPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISE 215 (851)
Q Consensus 137 -~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 215 (851)
++.+..+++|++|+|++|.+. .+|..+..+++|++|++++|.+.....+..+..+++|++|++++|++.+..+..+..
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 122445666666666666665 344455555566666666555542111134555555555555555555555555555
Q ss_pred ccccCccccccccccc-cccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEE
Q 003065 216 LRELGTLDICRNKISG-EFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVF 294 (851)
Q Consensus 216 l~~L~~L~L~~N~i~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 294 (851)
+++|++|++++|++++ ..|..+..+++|++|++++|++++..|..|..+++|++|+|++|+
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~------------------ 210 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN------------------ 210 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC------------------
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCc------------------
Confidence 5555555555555543 344445555555555555555554444444444445555555444
Q ss_pred EccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCC-CccceeeccCCcccccCc--hhhhhhcchHHHHhccC
Q 003065 295 QCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRY-TALTDVDISENQFSGSFP--KYLCEKRKLLNLLALSN 371 (851)
Q Consensus 295 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p--~~~~~~~~L~~l~l~~n 371 (851)
+++..+..+..+++|+.|++++|++++..|..+..+ ++|+.|+|++|++++.-+ .....+.....+....+
T Consensus 211 ------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~ 284 (306)
T 2z66_A 211 ------FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVE 284 (306)
T ss_dssp ------CSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGG
T ss_pred ------cCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcccc
Confidence 444333344455555555555555555555555555 366666666666654321 11112223334444556
Q ss_pred CccccccccccCc
Q 003065 372 NFSGEVPNSYADC 384 (851)
Q Consensus 372 ~~~~~~p~~~~~l 384 (851)
.+....|..+.+.
T Consensus 285 ~~~C~~p~~~~g~ 297 (306)
T 2z66_A 285 RMECATPSDKQGM 297 (306)
T ss_dssp GCBEEESGGGTTC
T ss_pred ccccCCchhhCCc
Confidence 6666666666554
No 72
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=2e-34 Score=339.69 Aligned_cols=450 Identities=12% Similarity=0.046 Sum_probs=320.9
Q ss_pred CcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcc---cCccCcccc------------cCCCCc
Q 003065 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVL---SGKLPLELS------------NCSNLK 124 (851)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L~ 124 (851)
|++|.++.+.. .+. +.+. +.+...++..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~--~~~--l~~~-~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--REH--VTMA-LCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--CCE--EEES-CGGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--ccE--EEEe-eccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 45899986532 122 2222 223333445667788999999987532 234554433 789999
Q ss_pred eEecccCcccCCCCC-CCC-C-CCCCeEeccCcc-cCC-CCcccccCccccceeecccccCCCCC---CcccccCCCCCC
Q 003065 125 VLNVTGNAMVGSVPD-LSA-L-KNLEIFDLSINY-FTG-RFPRWVVNLTQLVSLSIGDNVYDEAE---IPESIGNLKNLT 196 (851)
Q Consensus 125 ~L~Ls~n~l~~~~~~-l~~-l-~~L~~L~Ls~N~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~ 196 (851)
+|+|++|.+++..+. +.. + ++|++|+|++|. ++. .++....++++|++|+|++|.+.... ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 999999988765443 554 3 349999999987 221 12223357899999999999986322 344567789999
Q ss_pred eEeccccccc----ccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCcc---CcCCcCcCCCCcccE
Q 003065 197 YLFLAHCNLR----GRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT---GELPAELGNLTLLQE 269 (851)
Q Consensus 197 ~L~L~~n~l~----~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~ 269 (851)
+|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+.++++|++|+++..... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 9999999997 3445556788999999999999985 7788999999999999864433 344567788999999
Q ss_pred EecccccccCCCCccccCcCCccEEEccCCccCCCCC-CCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccC--
Q 003065 270 FDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFP-SGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE-- 346 (851)
Q Consensus 270 L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~-- 346 (851)
|+++++... .+|..+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|++++
T Consensus 275 L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~ 353 (592)
T 3ogk_B 275 LGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGA 353 (592)
T ss_dssp EEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred cCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCc
Confidence 999987543 678888999999999999999765433 2357889999999994333333344446788999999993
Q ss_pred ---------CcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccC-ccccceEEe
Q 003065 347 ---------NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWA-LPNVGMLDF 416 (851)
Q Consensus 347 ---------N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L 416 (851)
|.+++... +.....+++|++|+++.|.+++..+..+.. +++|+.|++
T Consensus 354 ~~~~~~~~~~~~~~~~~-----------------------~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l 410 (592)
T 3ogk_B 354 DEQGMEDEEGLVSQRGL-----------------------IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRL 410 (592)
T ss_dssp CSSTTSSTTCCCCHHHH-----------------------HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEE
T ss_pred cccccccccCccCHHHH-----------------------HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEE
Confidence 55553211 111334678888888888888777766665 788888888
Q ss_pred c----CCcCCCC-----CCcccccCCCCCeEecCCCc--ceeeCCccccc-CCCCcEEeccCccccC-CCccccccCCcc
Q 003065 417 G----DNDFTGG-----ISPLIGLSTSLSQLVLQNNR--FSGELPSELGR-LTNLERLILTNNNFSG-KIPSALGALRQL 483 (851)
Q Consensus 417 s----~N~l~~~-----~~~~~~~~~~L~~L~Ls~N~--l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L 483 (851)
+ .|++++. ++..+..+++|+.|+|++|. +++..+..+.. +++|++|++++|.+++ .++..+.++++|
T Consensus 411 ~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L 490 (592)
T 3ogk_B 411 VLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL 490 (592)
T ss_dssp EECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTC
T ss_pred eecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCccc
Confidence 6 6777764 33346668889999997543 66555555544 7889999999999875 345566788899
Q ss_pred cEEEecCCcccCC-CCCCcccccccceeeccCcccccccCCCc-cccccCCeEeCCCC
Q 003065 484 SSLHLEENALTGS-IPNEMGDCARIVDLNLARNSLSGNIPRSL-SLLSSLNALNLSGN 539 (851)
Q Consensus 484 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N 539 (851)
+.|+|++|.+++. ++..+..+++|+.|+|++|++++.-...+ ..++.+....+..+
T Consensus 491 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 491 QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 9999999998654 44445678899999999999886543333 34566665555544
No 73
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97 E-value=2.7e-31 Score=307.64 Aligned_cols=167 Identities=20% Similarity=0.366 Sum_probs=148.8
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
+++|++.+.||+|+||.||+|+++.+++.||||++.... ..+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999999999999999986553 456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC--CceEEeeecCccccC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED--YEPKIADFGVAKIAE 830 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla~~~~ 830 (851)
|+||+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 236 ~~gg~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 236 MSGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCBHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred cCCCcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999988642 346889999999999999999999 7899999999999999854 899999999999876
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... ....+||+.|||||
T Consensus 309 ~~~~---~~~~~GT~~y~APE 326 (573)
T 3uto_A 309 PKQS---VKVTTGTAEFAAPE 326 (573)
T ss_dssp TTSE---EEEECSSGGGCCHH
T ss_pred CCCc---eeeeEECccccCHH
Confidence 5432 23468999999998
No 74
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.3e-30 Score=280.37 Aligned_cols=283 Identities=18% Similarity=0.175 Sum_probs=207.2
Q ss_pred cEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccc
Q 003065 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (851)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 178 (851)
+.++.+++.++ .+|..+. ++|++|+|++|+++..++. +.++++|++|+|++|.++...
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~------------------ 68 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG------------------ 68 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE------------------
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc------------------
Confidence 35666777766 4565443 5677777777777655554 566666777777666665211
Q ss_pred cCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCcccccccccccccc-ccccCCCcccEEEeeccCccCcC
Q 003065 179 VYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFP-RSIRKLQKLWKIELYANNLTGEL 257 (851)
Q Consensus 179 ~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 257 (851)
..|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..
T Consensus 69 -----~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 69 -----CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp -----EEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECS
T ss_pred -----CcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccc
Confidence 11233444555555555555555 344455556666666666666654433 45677777777777777777777
Q ss_pred CcCcCCCCcccEEecccccccC-CCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCC
Q 003065 258 PAELGNLTLLQEFDISSNQMYG-KLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRY 336 (851)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 336 (851)
+..+..+++|++|++++|++++ .+|..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 7778888888888888888876 577888888999999999999988888899999999999999999998888889999
Q ss_pred CccceeeccCCcccccCchhhhhhc-chHHHHhccCCcccccc--ccccCccccceeccccCccccccCCcccCcc
Q 003065 337 TALTDVDISENQFSGSFPKYLCEKR-KLLNLLALSNNFSGEVP--NSYADCKTIQRLRISDNHLSGKIPDGLWALP 409 (851)
Q Consensus 337 ~~L~~L~Ls~N~l~~~~p~~~~~~~-~L~~l~l~~n~~~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 409 (851)
++|+.|++++|++++..|..+..++ +|+++++.+|.+.+..+ .....+...+.+....+.+....|..+.+.+
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~ 298 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMP 298 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCB
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCce
Confidence 9999999999999999999998884 89999999999987643 1123345566777888888888888876644
No 75
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.4e-30 Score=282.85 Aligned_cols=178 Identities=15% Similarity=0.117 Sum_probs=88.6
Q ss_pred cccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEE
Q 003065 168 TQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIE 247 (851)
Q Consensus 168 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~ 247 (851)
+.....++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..|..|.++++|++|+
T Consensus 31 ~~~~~c~~~~~~l~--~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 31 DRNGICKGSSGSLN--SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CTTSEEECCSTTCS--SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCeEeeCCCCCcc--ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 33344555555554 4554443 3555555555555544444555555555555555555554455555555555555
Q ss_pred eeccCccCcCCcCcCCCCcccEEecccccccCCCC-ccccCcCCccEEEccCCc-cCCCCCCCCCCcccccEEEeccCcC
Q 003065 248 LYANNLTGELPAELGNLTLLQEFDISSNQMYGKLP-EEIGNLKNLTVFQCFKNN-FSGEFPSGFGDMRKLFAFSIYGNRF 325 (851)
Q Consensus 248 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l 325 (851)
|++|++++..+..|.++++|++|++++|++++..+ ..+.++++|++|++++|+ +.+..+..|.++++|++|++++|++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 55555553333335555555555555555553222 244455555555555552 3333334444444555555554444
Q ss_pred CCCCCCccCCCCccceeeccCCcc
Q 003065 326 SGPFPENLGRYTALTDVDISENQF 349 (851)
Q Consensus 326 ~~~~p~~l~~l~~L~~L~Ls~N~l 349 (851)
++..|..+..+++|++|++++|++
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCS
T ss_pred CccCHHHHhccccCCeecCCCCcc
Confidence 444444444444444444444444
No 76
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.6e-31 Score=286.32 Aligned_cols=271 Identities=18% Similarity=0.223 Sum_probs=134.4
Q ss_pred CCCCCCCCCCCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcc-cCccCcccc-------cCC
Q 003065 50 LDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVL-SGKLPLELS-------NCS 121 (851)
Q Consensus 50 l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~ 121 (851)
..+|... ..|+.|..+.......+++.++++++.+ .+|..+... |++|+|++|.+ .+.+|..+. +++
T Consensus 21 ~~~~~~~-~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~ 95 (312)
T 1wwl_A 21 KPDWSSA-FNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS 95 (312)
T ss_dssp SCCGGGG-GGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS
T ss_pred ccchHHH-hhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC
Confidence 3455543 3444554443222222344555555555 445444433 55555555555 334444443 455
Q ss_pred CCceEecccCcccCCCCC-C--CCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeE
Q 003065 122 NLKVLNVTGNAMVGSVPD-L--SALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYL 198 (851)
Q Consensus 122 ~L~~L~Ls~n~l~~~~~~-l--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 198 (851)
+|++|+|++|++++..|. + ..+++|++|+|++|.+++. |..+..+.. ..+++|++|
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~--------------------~~~~~L~~L 154 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQ--------------------WLKPGLKVL 154 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT--------------------TCCTTCCEE
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHH--------------------hhcCCCcEE
Confidence 555555555555544443 2 4555555555555555544 444444400 000455555
Q ss_pred ecccccccccCCcccccccccCcccccccccccc--ccccc--cCCCcccEEEeeccCccC--cCC-cCcCCCCcccEEe
Q 003065 199 FLAHCNLRGRIPESISELRELGTLDICRNKISGE--FPRSI--RKLQKLWKIELYANNLTG--ELP-AELGNLTLLQEFD 271 (851)
Q Consensus 199 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~--~p~~~--~~l~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~ 271 (851)
+|++|++++..|..|+++++|++|+|++|++.+. .|..+ ..+++|++|+|++|++++ .++ ..+.++++|++|+
T Consensus 155 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~ 234 (312)
T 1wwl_A 155 SIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLD 234 (312)
T ss_dssp EEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEE
T ss_pred EeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEE
Confidence 5555555544444555555555555555554433 12222 455555555555555542 111 2233455555555
Q ss_pred cccccccCCCC-ccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCccc
Q 003065 272 ISSNQMYGKLP-EEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (851)
Q Consensus 272 Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 350 (851)
+++|++++..| ..+..+++|++|++++|+++ .+|..+. ++|++|++++|++++. |. +..+++|++|++++|+++
T Consensus 235 Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 235 LSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 55555555443 23444555666666666655 4455444 5666666666666644 44 566666666666666665
Q ss_pred c
Q 003065 351 G 351 (851)
Q Consensus 351 ~ 351 (851)
+
T Consensus 310 ~ 310 (312)
T 1wwl_A 310 D 310 (312)
T ss_dssp C
T ss_pred C
Confidence 3
No 77
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=6.1e-30 Score=298.15 Aligned_cols=293 Identities=22% Similarity=0.305 Sum_probs=155.0
Q ss_pred CCCCCCCCCCCCCCcccceeEec------CCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccC
Q 003065 47 HGVLDSWKESADSPCGFSGITCD------SVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNC 120 (851)
Q Consensus 47 ~~~l~sW~~~~~~~c~w~gv~c~------~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 120 (851)
...+++|... .+||.|.|..|. .....++.|++++++|+ .+|..+. ++|++|+|++|.++ .+|. .+
T Consensus 9 ~~~w~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 9 DAVWSAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp -CHHHHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 4456778776 678999775321 11123566777777766 5666554 56666666666666 3554 45
Q ss_pred CCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEec
Q 003065 121 SNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL 200 (851)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 200 (851)
++|++|+|++|++++.++ .+++|++|+|++|.+++. |. .+++|++|++++|+++ .+|.. +++|++|+|
T Consensus 81 ~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~--~lp~~---l~~L~~L~L 148 (622)
T 3g06_A 81 PELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLT--SLPVL---PPGLQELSV 148 (622)
T ss_dssp TTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCS--CCCCC---CTTCCEEEC
T ss_pred CCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCC--cCCCC---CCCCCEEEC
Confidence 666666666666665433 456666666666666532 22 3455555555555554 34432 245555555
Q ss_pred ccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCC
Q 003065 201 AHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (851)
Q Consensus 201 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (851)
++|++++ +|.. +++|+.|++++|.+++ +| ..+++|+.|++++|++++
T Consensus 149 s~N~l~~-l~~~---------------------------~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 149 SDNQLAS-LPAL---------------------------PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---------------------------CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-cCCc---------------------------cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 5555542 2221 2344444455554442 33 223445555555555542
Q ss_pred CCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhh
Q 003065 281 LPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEK 360 (851)
Q Consensus 281 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 360 (851)
+|.. +++|+.|++++|.++ .+|.. +++|+.|++++|++++ +| ..+++|+.|+|++|+|+ .+|
T Consensus 196 l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp------ 257 (622)
T 3g06_A 196 LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLP------ 257 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCC------
T ss_pred CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCC------
Confidence 2221 244555555555555 23322 2455555555555553 33 23455666666666655 122
Q ss_pred cchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccC
Q 003065 361 RKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLS 432 (851)
Q Consensus 361 ~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 432 (851)
. .+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+++.++..+..+
T Consensus 258 ------------------~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 258 ------------------M---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp ------------------C---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred ------------------c---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 1 2244566666666665 455556666666666666666665555544433
No 78
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=4e-31 Score=284.82 Aligned_cols=249 Identities=17% Similarity=0.184 Sum_probs=191.5
Q ss_pred ccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCccc-CCCCccccc-------CccccceeecccccCCCCCCcccc
Q 003065 118 SNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYF-TGRFPRWVV-------NLTQLVSLSIGDNVYDEAEIPESI 189 (851)
Q Consensus 118 ~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l-~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~p~~~ 189 (851)
+..++|++|++++|.+ ..++.+... |+.|+|++|.+ ...+|..+. ++++|++|+|++|.++ +.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l-~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE-ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT-GTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT-CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCB-SCCCCCS
T ss_pred ccCCCceeEeeccccc-ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCccc-chhHHHH
Confidence 3344444444444444 211112222 44455555555 223444433 5666666667666665 4566665
Q ss_pred --cCCCCCCeEecccccccccCCcccccc-----cccCccccccccccccccccccCCCcccEEEeeccCccCc--CCcC
Q 003065 190 --GNLKNLTYLFLAHCNLRGRIPESISEL-----RELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGE--LPAE 260 (851)
Q Consensus 190 --~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~ 260 (851)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|.++++|++|+|++|++.+. .|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 7888999999999999876 8888887 8999999999999988889999999999999999998765 2334
Q ss_pred c--CCCCcccEEecccccccCC--CC-ccccCcCCccEEEccCCccCCCCC-CCCCCcccccEEEeccCcCCCCCCCccC
Q 003065 261 L--GNLTLLQEFDISSNQMYGK--LP-EEIGNLKNLTVFQCFKNNFSGEFP-SGFGDMRKLFAFSIYGNRFSGPFPENLG 334 (851)
Q Consensus 261 ~--~~l~~L~~L~Ls~N~l~~~--~p-~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 334 (851)
+ ..+++|++|++++|++++. ++ ..+.++++|++|++++|++++..| ..+..+++|++|++++|+++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 4 8899999999999999832 22 345688999999999999998875 46778999999999999999 7788776
Q ss_pred CCCccceeeccCCcccccCchhhhhhcchHHHHhccCCcccc
Q 003065 335 RYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGE 376 (851)
Q Consensus 335 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~ 376 (851)
++|++|||++|+|++. |. +..+++|+++++.+|.+++.
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 8999999999999976 76 88999999999999998763
No 79
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=7.1e-29 Score=281.81 Aligned_cols=255 Identities=19% Similarity=0.200 Sum_probs=218.3
Q ss_pred CccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhc
Q 003065 290 NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLAL 369 (851)
Q Consensus 290 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~ 369 (851)
....++++++.++ .+|..+. +++++|++++|++++..|..|..+++|+.|+|++|+|++
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------------------ 113 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ------------------ 113 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE------------------
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCC------------------
Confidence 4567888888887 5666553 578888888888887778888888888888888887764
Q ss_pred cCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCC-Ccceee
Q 003065 370 SNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQN-NRFSGE 448 (851)
Q Consensus 370 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~ 448 (851)
..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++.++..|..+++|+.|+|++ |.+...
T Consensus 114 ------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i 187 (452)
T 3zyi_A 114 ------IEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYI 187 (452)
T ss_dssp ------ECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred ------cChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcccc
Confidence 3345677888999999999999977777788899999999999999988888899999999999998 556655
Q ss_pred CCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCcccc
Q 003065 449 LPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLL 528 (851)
Q Consensus 449 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 528 (851)
.+..|.++++|++|+|++|++++. | .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+
T Consensus 188 ~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 265 (452)
T 3zyi_A 188 SEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL 265 (452)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred ChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCC
Confidence 556799999999999999999864 4 58889999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccc
Q 003065 529 SSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 529 ~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
++|+.|+|++|+|++..+..+..+ .|+.|++++|+|.|.+...|.
T Consensus 266 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l 311 (452)
T 3zyi_A 266 ASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWL 311 (452)
T ss_dssp TTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHH
T ss_pred CCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchHH
Confidence 999999999999997666777777 899999999999999986654
No 80
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=9.2e-29 Score=279.90 Aligned_cols=255 Identities=22% Similarity=0.239 Sum_probs=221.7
Q ss_pred CccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhc
Q 003065 290 NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLAL 369 (851)
Q Consensus 290 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~ 369 (851)
..+.++++++.++ .+|..+. ++++.|+|++|++++..+..|..+++|++|+|++|+|++.
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i----------------- 103 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI----------------- 103 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEE-----------------
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCcc-----------------
Confidence 4568888888888 5676554 6788889999998888888888888999999988888743
Q ss_pred cCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCC-Ccceee
Q 003065 370 SNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQN-NRFSGE 448 (851)
Q Consensus 370 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~ 448 (851)
.+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++ |.+...
T Consensus 104 -------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i 176 (440)
T 3zyj_A 104 -------EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYI 176 (440)
T ss_dssp -------CGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred -------ChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCccee
Confidence 335677788999999999999977777889999999999999999988888899999999999998 456655
Q ss_pred CCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCcccc
Q 003065 449 LPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLL 528 (851)
Q Consensus 449 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 528 (851)
.+..|.++++|++|+|++|.++. +| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+
T Consensus 177 ~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 254 (440)
T 3zyj_A 177 SEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 254 (440)
T ss_dssp CTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTC
T ss_pred CcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCC
Confidence 56689999999999999999984 45 48899999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccc
Q 003065 529 SSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 529 ~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
++|+.|+|++|+|++..+..+..+ .|+.|++++|+|.|++...|.
T Consensus 255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l 300 (440)
T 3zyj_A 255 QSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWL 300 (440)
T ss_dssp TTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHH
T ss_pred CCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHH
Confidence 999999999999997666777888 899999999999999986654
No 81
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=6.2e-29 Score=264.18 Aligned_cols=223 Identities=21% Similarity=0.223 Sum_probs=106.4
Q ss_pred EEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCc
Q 003065 245 KIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (851)
Q Consensus 245 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (851)
.++.+++.++ .+|..+ .++|++|++++|++++..+..|.++++|++|++++|.+++..|..|..+++|++|++++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 15 TTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp EEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 3444444444 333322 2445555555555554444445555555555555555544444444444555555554444
Q ss_pred -CCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCC
Q 003065 325 -FSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPD 403 (851)
Q Consensus 325 -l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 403 (851)
++...|..+..+++|++|++++|++++. .|..|..+++|++|++++|++++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQEL------------------------GPGLFRGLAALQYLYLQDNALQALPDD 147 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCC------------------------CTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEE------------------------CHhHhhCCcCCCEEECCCCcccccCHh
Confidence 4433344444444444444444444321 122233344444555555544433333
Q ss_pred cccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcc
Q 003065 404 GLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQL 483 (851)
Q Consensus 404 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 483 (851)
.+..+++|++|++++|++++.++..+..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..+..+..+++|
T Consensus 148 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 44444444444444444444444444444555555555555554545555555555555555555554444445555555
Q ss_pred cEEEecCCccc
Q 003065 484 SSLHLEENALT 494 (851)
Q Consensus 484 ~~L~Ls~N~l~ 494 (851)
+.|+|++|.+.
T Consensus 228 ~~L~l~~N~~~ 238 (285)
T 1ozn_A 228 QYLRLNDNPWV 238 (285)
T ss_dssp CEEECCSSCEE
T ss_pred CEEeccCCCcc
Confidence 55555555554
No 82
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.2e-28 Score=262.05 Aligned_cols=225 Identities=21% Similarity=0.269 Sum_probs=137.6
Q ss_pred cEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccc
Q 003065 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (851)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 178 (851)
++++.+++.++ .+|..+ .++|++|+|++|.+++.++. +..+++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777777776 456544 35777777777777776654 677777777777777776555555666666666666555
Q ss_pred c-CCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcC
Q 003065 179 V-YDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGEL 257 (851)
Q Consensus 179 ~-l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 257 (851)
. +. ...|..+..+++|++|++++|++++..| ..|.++++|++|++++|++++..
T Consensus 91 ~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 91 AQLR-SVDPATFHGLGRLHTLHLDRCGLQELGP------------------------GLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp TTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCT------------------------TTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcc-ccCHHHhcCCcCCCEEECCCCcCCEECH------------------------hHhhCCcCCCEEECCCCcccccC
Confidence 4 33 1224445555555555555555554444 44444555555555555555444
Q ss_pred CcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCC
Q 003065 258 PAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYT 337 (851)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~ 337 (851)
+..|..+++|++|++++|++++..+..|.++++|+.|++++|++++..|..|..+++|+.|++++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 44455555555666666655544444555666666666666666655566666666666777777777665556677777
Q ss_pred ccceeeccCCccccc
Q 003065 338 ALTDVDISENQFSGS 352 (851)
Q Consensus 338 ~L~~L~Ls~N~l~~~ 352 (851)
+|+.|++++|++...
T Consensus 226 ~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCD 240 (285)
T ss_dssp TCCEEECCSSCEECS
T ss_pred ccCEEeccCCCccCC
Confidence 777788888877643
No 83
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96 E-value=4.4e-29 Score=270.38 Aligned_cols=166 Identities=29% Similarity=0.414 Sum_probs=148.4
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
+.+|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35799999999999999999999999999999998654 23456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+...
T Consensus 94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999764 34788999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... ....+||+.|+|||
T Consensus 166 ~~~~---~~~~~gt~~y~aPE 183 (328)
T 3fe3_A 166 VGGK---LDAFCGAPPYAAPE 183 (328)
T ss_dssp SSCG---GGTTSSSGGGCCHH
T ss_pred CCCc---cccccCCcceeCcc
Confidence 4432 23467999999998
No 84
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.96 E-value=1e-28 Score=268.17 Aligned_cols=167 Identities=30% Similarity=0.400 Sum_probs=148.0
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+++|+..+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|+++++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 35789999999999999999999999999999998643 3466788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++.+. ..+++..+..++.|++.||+||| +++|+||||||+||+++.+|.+||+|||+|+..
T Consensus 84 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999999999998764 35788899999999999999999 789999999999999999999999999999864
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... .....+||+.|+|||
T Consensus 156 ~~~~~--~~~~~~gt~~y~aPE 175 (337)
T 1o6l_A 156 ISDGA--TMKTFCGTPEYLAPE 175 (337)
T ss_dssp CCTTC--CBCCCEECGGGCCGG
T ss_pred ccCCC--cccccccChhhCChh
Confidence 33222 233467999999998
No 85
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96 E-value=7.2e-29 Score=271.24 Aligned_cols=168 Identities=33% Similarity=0.460 Sum_probs=143.7
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 747 (851)
.+++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|.++++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 456899999999999999999999999999999998643 3456678999999988 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++|+|.+++.+. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+
T Consensus 101 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEcccccee
Confidence 999999999999999764 35889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... .....+||+.|+|||
T Consensus 173 ~~~~~~~--~~~~~~gt~~y~aPE 194 (353)
T 3txo_A 173 EGICNGV--TTATFCGTPDYIAPE 194 (353)
T ss_dssp CSCC-----------CCGGGCCHH
T ss_pred ecccCCc--cccccCCCcCeEChh
Confidence 6443322 233467999999998
No 86
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.96 E-value=1.8e-28 Score=262.23 Aligned_cols=166 Identities=27% Similarity=0.387 Sum_probs=148.4
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
..+|+..+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+.++++++||||+++++++..++..|+||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35899999999999999999999999999999998543 4567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 832 (851)
+++|+|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999998753 4788899999999999999999 789999999999999999999999999999876544
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
... .....||+.|+|||
T Consensus 170 ~~~--~~~~~gt~~y~aPE 186 (297)
T 3fxz_A 170 QSK--RSTMVGTPYWMAPE 186 (297)
T ss_dssp TCC--BCCCCSCGGGCCHH
T ss_pred ccc--cCCccCCcCccChh
Confidence 322 23457999999998
No 87
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.96 E-value=5.7e-29 Score=278.92 Aligned_cols=168 Identities=28% Similarity=0.337 Sum_probs=147.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
++|+..+.||+|+||+||+|+++.+++.||||++.+.. ....+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 57999999999999999999999999999999986532 2234789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++|+|.+++.+. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus 154 Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~ 226 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226 (437)
T ss_dssp CCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence 999999999999753 346889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... .....+||+.|||||
T Consensus 227 ~~~~~-~~~~~~GT~~Y~APE 246 (437)
T 4aw2_A 227 EDGTV-QSSVAVGTPDYISPE 246 (437)
T ss_dssp TTSCE-ECCSCCSCGGGCCHH
T ss_pred cCCCc-ccccccCCcCeeChH
Confidence 54332 223467999999998
No 88
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=274.83 Aligned_cols=241 Identities=20% Similarity=0.222 Sum_probs=155.6
Q ss_pred cccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCC
Q 003065 80 FDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTG 158 (851)
Q Consensus 80 l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~ 158 (851)
.++.+++ .+|..+. ++++.|+|++|++++..+..|+++++|++|+|++|.+++..+. |.++++|++|+|++|+++.
T Consensus 50 c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~ 126 (440)
T 3zyj_A 50 CVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 126 (440)
T ss_dssp CCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSS
T ss_pred eCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCe
Confidence 3344444 4555444 5667777777777665556666666666666666666554443 5555556666665555554
Q ss_pred CCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccc-cccccccccc
Q 003065 159 RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRN-KISGEFPRSI 237 (851)
Q Consensus 159 ~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~i~~~~p~~~ 237 (851)
..+.. |..+++|++|+|++|++++..+..|.++++|++|+|++| .++...+..|
T Consensus 127 ~~~~~-------------------------~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~ 181 (440)
T 3zyj_A 127 IPNGA-------------------------FVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAF 181 (440)
T ss_dssp CCTTT-------------------------SCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTT
T ss_pred eCHhH-------------------------hhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchh
Confidence 33334 445555555555555555444445555555666666553 3333333456
Q ss_pred cCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccE
Q 003065 238 RKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFA 317 (851)
Q Consensus 238 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 317 (851)
.++++|++|+|++|+++ .+| .+..+++|++|+|++|++++..|..|.++++|+.|++++|++++..+..|.++++|+.
T Consensus 182 ~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 259 (440)
T 3zyj_A 182 EGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVE 259 (440)
T ss_dssp TTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCE
T ss_pred hcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCE
Confidence 66666666666666666 344 3666777777777777777766777777777777777777777777777777888888
Q ss_pred EEeccCcCCCCCCCccCCCCccceeeccCCccc
Q 003065 318 FSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (851)
Q Consensus 318 L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 350 (851)
|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 260 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 260 INLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp EECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred EECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 888888888777777788888888888888876
No 89
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.8e-28 Score=275.86 Aligned_cols=238 Identities=19% Similarity=0.210 Sum_probs=161.8
Q ss_pred CCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCc
Q 003065 83 KSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFP 161 (851)
Q Consensus 83 ~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~ 161 (851)
.+++ .+|..+. +++++|+|++|++++..|..|+++++|++|+|++|.+++..+. |.++++|++|+|++|.+++..+
T Consensus 64 ~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 140 (452)
T 3zyi_A 64 RGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPS 140 (452)
T ss_dssp SCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCT
T ss_pred CCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccCh
Confidence 3444 3555444 5778888888888777777777778888887777777766654 6677777777777777665444
Q ss_pred ccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCcccccc-ccccccccccccCC
Q 003065 162 RWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICR-NKISGEFPRSIRKL 240 (851)
Q Consensus 162 ~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~i~~~~p~~~~~l 240 (851)
..|.++++|++|+|++| ++++..+..|.++++|++|++++ |.+....+..|.++
T Consensus 141 ~~~~~l~~L~~L~L~~N-------------------------~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l 195 (452)
T 3zyi_A 141 GAFEYLSKLRELWLRNN-------------------------PIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGL 195 (452)
T ss_dssp TTSSSCTTCCEEECCSC-------------------------CCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC
T ss_pred hhhcccCCCCEEECCCC-------------------------CcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCC
Confidence 44555555555555555 44444344455555555555555 23332333356666
Q ss_pred CcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEe
Q 003065 241 QKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSI 320 (851)
Q Consensus 241 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 320 (851)
++|++|+|++|++++ +| .+..+++|++|+|++|++++..|..|.++++|+.|++++|++++..|..|..+++|+.|++
T Consensus 196 ~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 273 (452)
T 3zyi_A 196 FNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNL 273 (452)
T ss_dssp TTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEEC
Confidence 666666666666663 33 3667777777777777777777777777888888888888887777777888888888888
Q ss_pred ccCcCCCCCCCccCCCCccceeeccCCccc
Q 003065 321 YGNRFSGPFPENLGRYTALTDVDISENQFS 350 (851)
Q Consensus 321 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 350 (851)
++|++++..+..+..+++|+.|+|++|.+.
T Consensus 274 ~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 274 AHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 888888777777888888888888888876
No 90
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.96 E-value=5.7e-29 Score=276.81 Aligned_cols=166 Identities=26% Similarity=0.356 Sum_probs=146.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.+|+..+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|+++++.++|||||++++++.+++..|+||
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999999999999999998653 23345789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||++||+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.+|.+||+|||+|+...
T Consensus 149 E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp CCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 999999999998652 4788889999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... ......+||+.|+|||
T Consensus 220 ~~~~-~~~~~~~gt~~Y~APE 239 (410)
T 3v8s_A 220 KEGM-VRCDTAVGTPDYISPE 239 (410)
T ss_dssp TTSE-EECCSCCSCGGGCCHH
T ss_pred cCCc-ccccCCcCCccccCHH
Confidence 4432 1233468999999998
No 91
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=272.04 Aligned_cols=172 Identities=21% Similarity=0.235 Sum_probs=147.9
Q ss_pred cCCccCCeecccCcEEEEEEE-----EcCCCcEEEEEEecccccHHHHHHHHHHHHcCC---CCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~ 747 (851)
.+|.+.+.||+|+||.||+|. ...+++.||||++... ....+.+|++++++++ |+||+++++++..++..|
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence 468899999999999999994 5678889999998654 4567888999998887 999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC-----------CC
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-----------DY 816 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~-----------~~ 816 (851)
+||||+++|+|.+++..........+++..++.++.|++.||+||| +.+|+||||||+|||++. ++
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccC
Confidence 9999999999999998765545667999999999999999999999 789999999999999998 89
Q ss_pred ceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 817 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.+||+|||+|+..............+||+.|||||
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE 255 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVE 255 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHH
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChH
Confidence 99999999998665333333345568999999998
No 92
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=271.65 Aligned_cols=166 Identities=27% Similarity=0.396 Sum_probs=148.7
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++|||||++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 35789999999999999999999999999999998543 3456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.+|.+||+|||+|+..
T Consensus 94 ~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp ECCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 999999999999875 245889999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....+||+.|+|||
T Consensus 166 ~~~~~---~~~~~gt~~Y~aPE 184 (384)
T 4fr4_A 166 PRETQ---ITTMAGTKPYMAPE 184 (384)
T ss_dssp CTTCC---BCCCCSCGGGCCGG
T ss_pred cCCCc---eeccCCCccccCCe
Confidence 54332 23467999999998
No 93
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=274.27 Aligned_cols=168 Identities=27% Similarity=0.316 Sum_probs=148.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
++|+..+.||+|+||+||+|+++.+++.||||++.+.. ..+.+.+|++++..++||||+++++++.+.+..|+||
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 57999999999999999999999999999999986532 2344788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++|+|.+++.+. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus 141 E~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp CCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred cCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheecc
Confidence 999999999999864 235888999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... .....+||+.|+|||
T Consensus 214 ~~~~~-~~~~~~Gt~~Y~APE 233 (412)
T 2vd5_A 214 ADGTV-RSLVAVGTPDYLSPE 233 (412)
T ss_dssp TTSCE-ECSSCCSCGGGCCHH
T ss_pred CCCcc-ccceeccccCcCCHH
Confidence 54322 223457999999998
No 94
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.95 E-value=1.9e-28 Score=264.11 Aligned_cols=164 Identities=30% Similarity=0.442 Sum_probs=147.2
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+.+|++.+.||+|+||.||+|+++.+++.||||++.+. ...+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 45789999999999999999999999999999998653 3456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.+|.+||+|||+|+..
T Consensus 85 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 9999999999999763 35788899999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
... ....+||+.|+|||
T Consensus 157 ~~~-----~~~~~gt~~y~aPE 173 (318)
T 1fot_A 157 PDV-----TYTLCGTPDYIAPE 173 (318)
T ss_dssp SSC-----BCCCCSCTTTCCHH
T ss_pred CCc-----cccccCCccccCHh
Confidence 432 22357999999998
No 95
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6e-30 Score=276.29 Aligned_cols=247 Identities=19% Similarity=0.196 Sum_probs=168.0
Q ss_pred cCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHH
Q 003065 286 GNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLN 365 (851)
Q Consensus 286 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~ 365 (851)
..+++|++|++++|++++..|..|..+++|++|++++|++++..+ +..+++|++|++++|++++..
T Consensus 31 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~------------ 96 (317)
T 3o53_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL------------ 96 (317)
T ss_dssp TTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE------------
T ss_pred ccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc------------
Confidence 334444444444444444333444444444444555554443332 555666666666666665210
Q ss_pred HHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcc
Q 003065 366 LLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRF 445 (851)
Q Consensus 366 l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l 445 (851)
..++|++|++++|++++..+.. +++|+.|++++|++++..+..+..+++|++|+|++|++
T Consensus 97 -----------------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 156 (317)
T 3o53_A 97 -----------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156 (317)
T ss_dssp -----------------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCC
T ss_pred -----------------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCC
Confidence 1246777777777776554443 46677777777777777776777777788888888888
Q ss_pred eeeCCcccc-cCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCC
Q 003065 446 SGELPSELG-RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRS 524 (851)
Q Consensus 446 ~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 524 (851)
++..|..+. .+++|++|+|++|.+++. |. ...+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..
T Consensus 157 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~ 232 (317)
T 3o53_A 157 DTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKA 232 (317)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTT
T ss_pred CcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhH
Confidence 777666664 678888888888888755 32 2347888888888888875 4455888888888999998888 57788
Q ss_pred ccccccCCeEeCCCCccc-cccCcccccc-cceEEeCc-CCcccccCCc
Q 003065 525 LSLLSSLNALNLSGNKLT-GSIPDNLMKL-KLSSIDLS-ENQLSGSVPL 570 (851)
Q Consensus 525 ~~~l~~L~~L~Ls~N~l~-g~ip~~l~~l-~L~~l~ls-~N~l~~~~p~ 570 (851)
+..+++|+.|+|++|+++ +.+|.++..+ .|+.++++ .+.+.|..|.
T Consensus 233 ~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 233 LRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred hhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 888889999999999998 7788888877 78888888 4457776654
No 96
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.95 E-value=1e-28 Score=268.99 Aligned_cols=168 Identities=30% Similarity=0.438 Sum_probs=141.7
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++...+..|+|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 357999999999999999999999999999999986543 33568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|.....
T Consensus 89 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 89 YCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999999764 35889999999999999999999 78999999999999999999999999999986554
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
.... .....+||+.|+|||
T Consensus 161 ~~~~-~~~~~~gt~~y~aPE 179 (347)
T 3zgw_A 161 NKDY-HLQTCCGSLAYAAPE 179 (347)
T ss_dssp ------------CGGGCCHH
T ss_pred CCCc-cccccCCccCccCHH
Confidence 3221 223457999999998
No 97
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.95 E-value=2.4e-28 Score=263.07 Aligned_cols=169 Identities=27% Similarity=0.478 Sum_probs=146.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
++|...+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.+++..|+||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4788999999999999999999999999999988553 34567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 833 (851)
++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 90 KGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp TTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred CCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999763 346899999999999999999999 7899999999999999999999999999998765432
Q ss_pred Ccc------------cccccccccccccCC
Q 003065 834 KVS------------DYSCFAGTHGYIAPG 851 (851)
Q Consensus 834 ~~~------------~~~~~~gt~~Y~APE 851 (851)
... ......||+.|+|||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 192 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192 (310)
T ss_dssp -----------------CCCCSCGGGCCHH
T ss_pred ccccccccccccccccccccCCCcceeCHH
Confidence 211 111457999999998
No 98
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.95 E-value=1.3e-28 Score=272.30 Aligned_cols=167 Identities=27% Similarity=0.419 Sum_probs=146.1
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 748 (851)
+.+|++.+.||+|+||+||+|+++.+++.||||++.+.. ..+.+.+|..+++++ +|||||++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457999999999999999999999999999999986542 234578899999887 89999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++|+|.+++.+. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.+|.+||+|||+|+.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999999864 35889999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....+||+.|+|||
T Consensus 203 ~~~~~~--~~~~~~gt~~Y~aPE 223 (396)
T 4dc2_A 203 GLRPGD--TTSTFCGTPNYIAPE 223 (396)
T ss_dssp CCCTTC--CBCCCCBCGGGCCHH
T ss_pred cccCCC--ccccccCCcccCCch
Confidence 433221 234468999999998
No 99
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.6e-27 Score=277.69 Aligned_cols=267 Identities=28% Similarity=0.405 Sum_probs=153.6
Q ss_pred CCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecc
Q 003065 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDIS 273 (851)
Q Consensus 194 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 273 (851)
+++.|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4666666666666 5555444 56666666666665 3333 3455555566655555 2333 34555555555
Q ss_pred cccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccC
Q 003065 274 SNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSF 353 (851)
Q Consensus 274 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 353 (851)
+|++++ +|. .+++|+.|++++|++++ +|. . +++|+.|+|++|++++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~------------------------~---l~~L~~L~Ls~N~l~~-l 156 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV------------------------L---PPGLQELSVSDNQLAS-L 156 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC------------------------C---CTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC------------------------C---CCCCCEEECcCCcCCC-c
Confidence 555553 222 33445555555555442 222 1 2445555555555442 1
Q ss_pred chhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCC
Q 003065 354 PKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (851)
Q Consensus 354 p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 433 (851)
| . ..++|+.|++++|.|++ +| ..+++|+.|++++|++++.++ .++
T Consensus 157 ~------------------------~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~----~~~ 201 (622)
T 3g06_A 157 P------------------------A---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT----LPS 201 (622)
T ss_dssp C------------------------C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCT
T ss_pred C------------------------C---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----ccc
Confidence 1 1 11345555555555552 33 234556666666666654332 135
Q ss_pred CCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeecc
Q 003065 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (851)
Q Consensus 434 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (851)
+|+.|++++|.++ .+|.. +++|+.|+|++|.|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|+
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVY 269 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECC
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCC
Confidence 6666677777666 34432 3667777777777775 44 34467777777777776 4554 45677777888
Q ss_pred CcccccccCCCccccccCCeEeCCCCccccccCcccccc
Q 003065 514 RNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL 552 (851)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l 552 (851)
+|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 88777 667777777888888888888887777766544
No 100
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.95 E-value=1.9e-28 Score=266.81 Aligned_cols=168 Identities=32% Similarity=0.482 Sum_probs=147.5
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 747 (851)
.+.+|+..+.||+|+||.||+|+++.+++.||||++.+. ...+.+..|.++++.+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 346899999999999999999999999999999998653 3456778899999887 9999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.+|.+||+|||+|+
T Consensus 95 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999764 35788999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... .....+||+.|+|||
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE 188 (345)
T 1xjd_A 167 ENMLGDA--KTNTFCGTPDYIAPE 188 (345)
T ss_dssp CCCCTTC--CBCCCCSCGGGCCHH
T ss_pred hcccCCC--cccCCCCCcccCChh
Confidence 6433222 233468999999998
No 101
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.1e-29 Score=272.07 Aligned_cols=268 Identities=16% Similarity=0.204 Sum_probs=151.3
Q ss_pred ceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccC
Q 003065 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (851)
Q Consensus 74 ~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (851)
+..-.+++.+.+...+...+..+++|++|+|++|++++..|..|+++++|++|+|++|.+++.++ +..+++|++|+|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCS
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcC
Confidence 34445566666655444555566677777777777776666667777777777777777766544 66667777777777
Q ss_pred cccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccc
Q 003065 154 NYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (851)
Q Consensus 154 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~ 233 (851)
|.+++.. ..++|++|++++|.+. .++. ..+++|++|++++|++++..+..+..+++|++|++++|++++..
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~--~~~~--~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNIS--RVSC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCS--EEEE--CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred Ccccccc-----CCCCcCEEECCCCccC--CcCc--cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 7665321 2255555555555554 1111 12344555555555555444444555555555555555554444
Q ss_pred cccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcc
Q 003065 234 PRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMR 313 (851)
Q Consensus 234 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 313 (851)
+..+. ..+++|++|+|++|++++. |. ...+++|++|++++|++++ +|..+..++
T Consensus 161 ~~~~~-----------------------~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~ 214 (317)
T 3o53_A 161 FAELA-----------------------ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAA 214 (317)
T ss_dssp GGGGG-----------------------GGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGT
T ss_pred HHHHh-----------------------hccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccC
Confidence 43332 2344455555555544422 11 1224555555555555553 233355555
Q ss_pred cccEEEeccCcCCCCCCCccCCCCccceeeccCCccc-ccCchhhhhhcchHHHHhccC-Ccccccc
Q 003065 314 KLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFS-GSFPKYLCEKRKLLNLLALSN-NFSGEVP 378 (851)
Q Consensus 314 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~~~~L~~l~l~~n-~~~~~~p 378 (851)
+|+.|++++|+++ .+|..+..+++|+.|++++|++. +.+|.++..+++|+.+.+.++ .+.+..|
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 5666666666665 35556667777777777777777 666777777777777776633 3444433
No 102
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.95 E-value=3.1e-28 Score=265.62 Aligned_cols=167 Identities=28% Similarity=0.433 Sum_probs=146.7
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 748 (851)
+.+|+..+.||+|+||.||+|+++.+++.||||++.+. ...+.+.+|+.+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 45789999999999999999999999999999998654 2345678899999988 89999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++|+|.+++.+. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 88 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence 99999999999999764 35889999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....+||+.|+|||
T Consensus 160 ~~~~~~--~~~~~~gt~~y~aPE 180 (345)
T 3a8x_A 160 GLRPGD--TTSTFCGTPNYIAPE 180 (345)
T ss_dssp SCCTTC--CBCCCCSCGGGCCHH
T ss_pred ccCCCC--cccccCCCccccCcc
Confidence 433221 233468999999998
No 103
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.95 E-value=3.6e-28 Score=266.43 Aligned_cols=165 Identities=27% Similarity=0.357 Sum_probs=146.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--------cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
+.|++.+.||+|+||.||+|+++.+++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..|
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 46899999999999999999999999999999986542 3577899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC----ceEEeee
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIADF 823 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DF 823 (851)
+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 92 lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 92 LILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999864 346899999999999999999999 78999999999999998776 7999999
Q ss_pred cCccccCCCCCcccccccccccccccCC
Q 003065 824 GVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+++....... .....||+.|+|||
T Consensus 164 G~a~~~~~~~~---~~~~~gt~~y~aPE 188 (361)
T 2yab_A 164 GLAHEIEDGVE---FKNIFGTPEFVAPE 188 (361)
T ss_dssp SSCEECCTTCC---CCCCCSCGGGCCHH
T ss_pred CCceEcCCCCc---cccCCCCccEECch
Confidence 99987765432 23467999999998
No 104
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.95 E-value=2.9e-28 Score=266.26 Aligned_cols=168 Identities=29% Similarity=0.384 Sum_probs=147.6
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 747 (851)
.+.+|+..+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|.++++.+ +||+|+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 346899999999999999999999989999999998643 3456788999999988 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||++||+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.+|.+||+|||+|+
T Consensus 98 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 999999999999999864 35888999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... .....+||+.|+|||
T Consensus 170 ~~~~~~~--~~~~~~gt~~y~aPE 191 (353)
T 2i0e_A 170 ENIWDGV--TTKTFCGTPDYIAPE 191 (353)
T ss_dssp CCCCTTC--CBCCCCSCGGGCCHH
T ss_pred ccccCCc--ccccccCCccccChh
Confidence 6433222 233468999999998
No 105
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.95 E-value=3.2e-28 Score=265.91 Aligned_cols=164 Identities=25% Similarity=0.362 Sum_probs=147.6
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+.+|+..+.||+|+||.||+|++..+++.||||++.+. ...+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 45899999999999999999999999999999998543 3456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++.+. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.+|.+||+|||+|+..
T Consensus 120 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceec
Confidence 9999999999999864 34788999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
... ....+||+.|+|||
T Consensus 192 ~~~-----~~~~~gt~~y~aPE 208 (350)
T 1rdq_E 192 KGR-----TWTLCGTPEALAPE 208 (350)
T ss_dssp SSC-----BCCCEECGGGCCHH
T ss_pred cCC-----cccccCCccccCHH
Confidence 543 22357999999998
No 106
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.95 E-value=2.9e-28 Score=268.82 Aligned_cols=173 Identities=29% Similarity=0.417 Sum_probs=147.4
Q ss_pred cCCccCCeecccCcEEEEEEEEc-------CCCcEEEEEEecccc---cHHHHHHHHHHHHcC-CCCccccEEEEEEeCC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG 744 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 744 (851)
++|++.+.||+|+||.||+|++. .++..||||++.... ..+.+.+|+++++++ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 47889999999999999999874 245579999986543 345688999999999 8999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~ 813 (851)
..|+||||+++|+|.+++...... ....+++..++.++.|++.||+||| +++|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEEC
Confidence 999999999999999999875211 1245789999999999999999999 78999999999999999
Q ss_pred CCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 814 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.++.+||+|||+|+...............||+.|+|||
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE 275 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 275 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHH
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHh
Confidence 99999999999998766544333334456889999998
No 107
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.95 E-value=4.1e-28 Score=265.79 Aligned_cols=170 Identities=25% Similarity=0.275 Sum_probs=147.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-------ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
+.|++.+.||+|+||.||+|+++.+++.||||++... ...+.+.+|+++++.++||||+++++++..++..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4689999999999999999999999999999998532 246778999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc---eEEeeecC
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFGV 825 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl 825 (851)
||||+++++|.+++..... ....+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+
T Consensus 104 v~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998876533 2345789999999999999999999 789999999999999986654 99999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++........ ....+||+.|+|||
T Consensus 180 a~~~~~~~~~--~~~~~gt~~y~aPE 203 (351)
T 3c0i_A 180 AIQLGESGLV--AGGRVGTPHFMAPE 203 (351)
T ss_dssp CEECCTTSCB--CCCCCSCGGGCCHH
T ss_pred eeEecCCCee--ecCCcCCcCccCHH
Confidence 9877654321 23457999999998
No 108
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.95 E-value=1.1e-28 Score=267.03 Aligned_cols=169 Identities=28% Similarity=0.397 Sum_probs=147.0
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
+++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999999999999999986442 24568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 86 YCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp CCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred cCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 9999999888753 345889999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
...........||+.|+|||
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE 177 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPE 177 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHH
T ss_pred CCcccccCCCccCcCccCcH
Confidence 43333334567999999998
No 109
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.95 E-value=3.5e-28 Score=264.29 Aligned_cols=173 Identities=23% Similarity=0.371 Sum_probs=144.1
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCC------
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------ 744 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 744 (851)
.+.+|++.+.||+|+||.||+|+++.+++.||||++... ...+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 356799999999999999999999999999999998643 34577899999999999999999999986543
Q ss_pred ---------------------------------------------------eeEEEEeccCCCCHHHHHHHhhhCCCCCC
Q 003065 745 ---------------------------------------------------SSFLVLEYMPNGNLFQALHKRVKEGKPEL 773 (851)
Q Consensus 745 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l 773 (851)
..|+||||+++++|.+++.... .....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~ 161 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDR 161 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGS
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccch
Confidence 3799999999999999998642 23345
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCCc----------cccccccc
Q 003065 774 DWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV----------SDYSCFAG 843 (851)
Q Consensus 774 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~g 843 (851)
.+..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+........ .......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 77778899999999999999 789999999999999999999999999999877654211 11234579
Q ss_pred ccccccCC
Q 003065 844 THGYIAPG 851 (851)
Q Consensus 844 t~~Y~APE 851 (851)
|+.|+|||
T Consensus 239 t~~y~aPE 246 (332)
T 3qd2_B 239 TKLYMSPE 246 (332)
T ss_dssp CGGGSCHH
T ss_pred CcCccChH
Confidence 99999998
No 110
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.7e-28 Score=262.56 Aligned_cols=166 Identities=23% Similarity=0.286 Sum_probs=147.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+|+++++.++||||+++++++.+.+..|+||||++
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 4789999999999999999999999999999998654 345568899999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC--CCceEEeeecCccccCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAENS 832 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~ 832 (851)
+|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 85 g~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 85 GLDIFERINTS----AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 99999988642 346889999999999999999999 789999999999999987 789999999999877554
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
.. .....||+.|+|||
T Consensus 158 ~~---~~~~~gt~~y~aPE 173 (321)
T 1tki_A 158 DN---FRLLFTAPEYYAPE 173 (321)
T ss_dssp CE---EEEEESCGGGSCHH
T ss_pred Cc---cccccCChhhcCcH
Confidence 32 23357999999998
No 111
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.95 E-value=4.3e-28 Score=258.90 Aligned_cols=167 Identities=26% Similarity=0.375 Sum_probs=141.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
++|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++..++..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4689999999999999999999999999999988442 23467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 91 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 91 EYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp ECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999764 35889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ......||+.|+|||
T Consensus 163 ~~~~~-~~~~~~gt~~y~aPE 182 (294)
T 4eqm_A 163 ETSLT-QTNHVLGTVQYFSPE 182 (294)
T ss_dssp -------------CCSSCCHH
T ss_pred ccccc-ccCccccCccccCHh
Confidence 43221 223457999999998
No 112
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.95 E-value=4.3e-28 Score=263.07 Aligned_cols=165 Identities=29% Similarity=0.423 Sum_probs=146.6
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+.+|.+.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++...+..|+|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999999999999999998543 2345788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+ +|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 9999 78999998764 35889999999999999999999 679999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....+||+.|+|||
T Consensus 159 ~~~~~---~~~~~gt~~y~aPE 177 (336)
T 3h4j_B 159 TDGNF---LKTSCGSPNYAAPE 177 (336)
T ss_dssp TTSBT---TCCCTTSTTTSCGG
T ss_pred cCCcc---cccccCCcCcCCHH
Confidence 54432 23357999999998
No 113
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.95 E-value=5.7e-28 Score=277.21 Aligned_cols=167 Identities=28% Similarity=0.374 Sum_probs=148.4
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.+|+..+.||+|+||.||+|+++.+++.||||++.+. .....+.+|+++++.++|||||++++++.+.+..|+||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 4688999999999999999999999999999998543 34566889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||++||+|.+++... ....+++..+..++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+...
T Consensus 264 Ey~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 264 TLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp CCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999998753 2345899999999999999999999 7899999999999999999999999999998775
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... ....+||+.|+|||
T Consensus 338 ~~~~---~~~~~GT~~Y~APE 355 (576)
T 2acx_A 338 EGQT---IKGRVGTVGYMAPE 355 (576)
T ss_dssp TTCC---EECCCSCGGGCCHH
T ss_pred cCcc---ccccCCCccccCHH
Confidence 5432 23357999999998
No 114
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=257.37 Aligned_cols=176 Identities=22% Similarity=0.250 Sum_probs=143.5
Q ss_pred cccccccHHHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcC-CCCccccEEEE
Q 003065 665 FHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNILKLYAC 739 (851)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~ 739 (851)
+.+........++|+..+.||+|+||+||+|++..+++.||||++... ........|+..+.++ +||||++++++
T Consensus 46 ~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~ 125 (311)
T 3p1a_A 46 YDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQA 125 (311)
T ss_dssp CCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 333333333446799999999999999999999999999999987543 2233445566666555 89999999999
Q ss_pred EEeCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceE
Q 003065 740 LLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (851)
Q Consensus 740 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 819 (851)
+.+++..|+||||+ +++|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+|
T Consensus 126 ~~~~~~~~lv~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~k 197 (311)
T 3p1a_A 126 WEEGGILYLQTELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCK 197 (311)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEE
T ss_pred EEeCCEEEEEEecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEE
Confidence 99999999999999 77999998765 346899999999999999999999 67999999999999999999999
Q ss_pred EeeecCccccCCCCCcccccccccccccccCC
Q 003065 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 820 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+|||+|+....... .....||+.|+|||
T Consensus 198 l~DFG~a~~~~~~~~---~~~~~gt~~y~aPE 226 (311)
T 3p1a_A 198 LGDFGLLVELGTAGA---GEVQEGDPRYMAPE 226 (311)
T ss_dssp ECCCTTCEECC---------CCCCCGGGCCGG
T ss_pred EccceeeeecccCCC---CcccCCCccccCHh
Confidence 999999987654332 23356999999998
No 115
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-28 Score=281.79 Aligned_cols=233 Identities=20% Similarity=0.191 Sum_probs=156.1
Q ss_pred CccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhc
Q 003065 290 NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLAL 369 (851)
Q Consensus 290 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~ 369 (851)
+|+.|++++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|+.|+|++|.|++..
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~---------------- 96 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL---------------- 96 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE----------------
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC----------------
Confidence 45555555555554444445555555555555555544333 556666666666666665211
Q ss_pred cCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeC
Q 003065 370 SNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGEL 449 (851)
Q Consensus 370 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 449 (851)
..++|++|++++|.+++..+.. +++|+.|+|++|++++.+|..++.+++|+.|+|++|.+++..
T Consensus 97 -------------~~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 97 -------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp -------------ECTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred -------------CCCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 1156777777777777655543 466777777777777777777777777777777778777777
Q ss_pred Ccccc-cCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCcccc
Q 003065 450 PSELG-RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLL 528 (851)
Q Consensus 450 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 528 (851)
|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|+|++. |..++.+++|+.|+|++|.|++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 77765 67788888888888876532 33477888888888888754 4447778888888888888884 67778888
Q ss_pred ccCCeEeCCCCccc-cccCcccccc-cceEEeCc
Q 003065 529 SSLNALNLSGNKLT-GSIPDNLMKL-KLSSIDLS 560 (851)
Q Consensus 529 ~~L~~L~Ls~N~l~-g~ip~~l~~l-~L~~l~ls 560 (851)
++|+.|++++|+++ +.+|.++..+ .++.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 88888888888887 6677777666 66666654
No 116
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=3.2e-27 Score=248.76 Aligned_cols=216 Identities=22% Similarity=0.275 Sum_probs=135.4
Q ss_pred CCCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCC
Q 003065 58 DSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSV 137 (851)
Q Consensus 58 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 137 (851)
.++|.|.|+.|+-. +.++.+++++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++.+
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 46899999998643 35667888888888 4666554 57788888888887665667777888888888887777666
Q ss_pred CC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccc
Q 003065 138 PD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISEL 216 (851)
Q Consensus 138 ~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 216 (851)
+. +..+++|++|+|++|.+++..+..|.++++|++|++++|.+ ++..+..|..+
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l-------------------------~~~~~~~~~~l 132 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQL-------------------------KSLPPRVFDSL 132 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCC-------------------------CCCCTTTTTTC
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCcc-------------------------CeeCHHHhCcC
Confidence 55 56777777777777777655444555555555555555555 44444444444
Q ss_pred cccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEc
Q 003065 217 RELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQC 296 (851)
Q Consensus 217 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 296 (851)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++
T Consensus 133 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 133 TKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 45555555555554433344555555555555555555444445555566666666666665444445555666666666
Q ss_pred cCCccC
Q 003065 297 FKNNFS 302 (851)
Q Consensus 297 ~~N~l~ 302 (851)
++|.+.
T Consensus 213 ~~N~~~ 218 (270)
T 2o6q_A 213 QENPWD 218 (270)
T ss_dssp CSSCBC
T ss_pred cCCCee
Confidence 666554
No 117
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.95 E-value=5.9e-28 Score=261.40 Aligned_cols=165 Identities=32% Similarity=0.422 Sum_probs=142.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-cHHHHHHHHHHHHcCCCCccccEEEEEEeCC----eeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNILKLYACLLKGG----SSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 750 (851)
.+|+..+.||+|+||.||+|++. ++.||||++.... ......+|+.++++++||||+++++++.... ..|+||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 47899999999999999999884 7899999986543 3345667899999999999999999998754 369999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC----------CcEEeCCCCCCEEECCCCceEE
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP----------PIIHRDIKSSNILLDEDYEPKI 820 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivHrDlkp~NILl~~~~~~kl 820 (851)
||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 102 e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp ECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred ecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 999999999999753 4889999999999999999999 77 9999999999999999999999
Q ss_pred eeecCccccCCCCCcccccccccccccccCC
Q 003065 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 821 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+|||+|+...............||+.|+|||
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE 203 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHH
T ss_pred ccCCcccccccccCccccccCccCccccCHh
Confidence 9999998776554433344467999999998
No 118
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=259.45 Aligned_cols=165 Identities=28% Similarity=0.362 Sum_probs=146.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--------cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
..|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++...+..|
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 36889999999999999999999999999999986432 3677999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC----ceEEeee
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIADF 823 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DF 823 (851)
+||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 91 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 99999999999999864 345889999999999999999999 78999999999999999887 7999999
Q ss_pred cCccccCCCCCcccccccccccccccCC
Q 003065 824 GVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+|+....... .....||+.|+|||
T Consensus 163 g~a~~~~~~~~---~~~~~gt~~y~aPE 187 (326)
T 2y0a_A 163 GLAHKIDFGNE---FKNIFGTPEFVAPE 187 (326)
T ss_dssp TTCEECCTTSC---CCCCCSCTTTCCHH
T ss_pred CCCeECCCCCc---cccccCCcCcCCce
Confidence 99987754332 23357999999998
No 119
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.95 E-value=9.4e-28 Score=263.78 Aligned_cols=166 Identities=28% Similarity=0.403 Sum_probs=145.8
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
..+|++.+.||+|+||.||+|.++.+++.||||++... ...+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 35799999999999999999999999999999998654 23466889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC---CceEEeeecCcc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFGVAK 827 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~ 827 (851)
||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||+|+
T Consensus 108 e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 108 DLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp CCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 99999999998864 245889999999999999999999 7899999999999999865 459999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... .....||+.|+|||
T Consensus 180 ~~~~~~~---~~~~~gt~~y~aPE 200 (362)
T 2bdw_A 180 EVNDSEA---WHGFAGTPGYLSPE 200 (362)
T ss_dssp CCTTCCS---CCCSCSCTTTCCHH
T ss_pred EecCCcc---cccCCCCccccCHH
Confidence 7664432 23467999999998
No 120
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.95 E-value=1.3e-27 Score=255.07 Aligned_cols=166 Identities=26% Similarity=0.363 Sum_probs=144.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
++|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5789999999999999999999999999999998643 234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++ ++.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+....
T Consensus 82 ~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9964 777766543 346899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
... ......||+.|+|||
T Consensus 154 ~~~--~~~~~~~t~~y~aPE 171 (292)
T 3o0g_A 154 PVR--CYSAEVVTLWYRPPD 171 (292)
T ss_dssp CCS--CCCSCCSCGGGCCHH
T ss_pred ccc--cccCCccccCCcChH
Confidence 322 223457899999998
No 121
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=269.45 Aligned_cols=167 Identities=23% Similarity=0.335 Sum_probs=145.5
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 357999999999999999999999999999999986542 3456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC---CCCceEEeeecCcc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIADFGVAK 827 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~ 827 (851)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||+|+
T Consensus 90 E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 90 DLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp CCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999998763 35889999999999999999999 78999999999999998 46789999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... ......||+.|+|||
T Consensus 162 ~~~~~~~--~~~~~~gt~~Y~APE 183 (444)
T 3soa_A 162 EVEGEQQ--AWFGFAGTPGYLSPE 183 (444)
T ss_dssp CCCTTCC--BCCCSCSCGGGCCHH
T ss_pred EecCCCc--eeecccCCcccCCHH
Confidence 7654432 223467999999998
No 122
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.95 E-value=6e-28 Score=265.69 Aligned_cols=167 Identities=31% Similarity=0.392 Sum_probs=138.3
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHH-HHcCCCCccccEEEEEEeCCeeEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEI-LGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
..+|+..+.||+|+||+||+|+++.+++.||||++.+.. ..+.+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357899999999999999999999999999999986542 23456677776 567899999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++|+|.+++.+. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.+|.+||+|||+|+.
T Consensus 117 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 99999999999999764 35788888999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....+||+.|+|||
T Consensus 189 ~~~~~~--~~~~~~gt~~y~aPE 209 (373)
T 2r5t_A 189 NIEHNS--TTSTFCGTPEYLAPE 209 (373)
T ss_dssp GBCCCC--CCCSBSCCCCCCCHH
T ss_pred cccCCC--ccccccCCccccCHH
Confidence 443322 233468999999998
No 123
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.95 E-value=1.3e-27 Score=273.76 Aligned_cols=170 Identities=28% Similarity=0.385 Sum_probs=149.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.+|...+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|++++++++||||+++++++...+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5788899999999999999999999999999998543 34567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||++||+|.+++.... .....+++..+..++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+...
T Consensus 265 E~~~gg~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp CCCTTCBHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeccCCCHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999987642 22446899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....+||+.|+|||
T Consensus 341 ~~~~~--~~~~~GT~~Y~APE 359 (543)
T 3c4z_A 341 AGQTK--TKGYAGTPGFMAPE 359 (543)
T ss_dssp TTCCC--BCCCCSCTTTSCHH
T ss_pred CCCcc--cccccCCccccChh
Confidence 44322 23457999999998
No 124
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.95 E-value=2e-27 Score=256.64 Aligned_cols=171 Identities=24% Similarity=0.348 Sum_probs=134.5
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
..+|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 35799999999999999999999999999999998643 234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 752 YMPNGNLFQALHKRVKE-GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
|++ |+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 6999999875432 2245889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... ......||+.|+|||
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE 178 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPD 178 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHH
T ss_pred CCcc--cCCCCcccccccCch
Confidence 4322 123357899999998
No 125
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.5e-28 Score=279.03 Aligned_cols=250 Identities=18% Similarity=0.188 Sum_probs=157.2
Q ss_pred cCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCc
Q 003065 82 NKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFP 161 (851)
Q Consensus 82 ~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 161 (851)
..++...+......+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| ++.+++|++|||++|.+++..
T Consensus 19 ~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~- 96 (487)
T 3oja_A 19 DSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELL- 96 (487)
T ss_dssp TTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEE-
T ss_pred hhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCC-
Confidence 333433333334445588888888888888777888888888888888888887665 788888888888888876432
Q ss_pred ccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCcccccccccccccccccc-CC
Q 003065 162 RWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIR-KL 240 (851)
Q Consensus 162 ~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~-~l 240 (851)
..++|++|++++|.+. .+|. ..+++|+.|+|++|++++..|..++.+++|++|+|++|++++..|..+. .+
T Consensus 97 ----~~~~L~~L~L~~N~l~--~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l 168 (487)
T 3oja_A 97 ----VGPSIETLHAANNNIS--RVSC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168 (487)
T ss_dssp ----ECTTCCEEECCSSCCC--CEEE--CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT
T ss_pred ----CCCCcCEEECcCCcCC--CCCc--cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC
Confidence 2266777777777665 2222 2345666666666666666666666666666666666666665555554 56
Q ss_pred CcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEe
Q 003065 241 QKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSI 320 (851)
Q Consensus 241 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 320 (851)
++|++|+|++|.+++..+ +..+++|++|+|++|++++. |..+..+++|+.|++++|.++
T Consensus 169 ~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~------------------ 227 (487)
T 3oja_A 169 DTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV------------------ 227 (487)
T ss_dssp TTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC------------------
T ss_pred CcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCc------------------
Confidence 666666666666654421 22355555555555555532 223555555555555555554
Q ss_pred ccCcCCCCCCCccCCCCccceeeccCCccc-ccCchhhhhhcchHHHHhc
Q 003065 321 YGNRFSGPFPENLGRYTALTDVDISENQFS-GSFPKYLCEKRKLLNLLAL 369 (851)
Q Consensus 321 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~~~~L~~l~l~ 369 (851)
+ +|..+..+++|+.|++++|.+. +.+|.++..++.+..+.+.
T Consensus 228 ------~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 228 ------L-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ------E-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ------c-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 2 3444555566666666666665 5566667777777776665
No 126
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.95 E-value=1.5e-27 Score=258.59 Aligned_cols=166 Identities=30% Similarity=0.426 Sum_probs=136.2
Q ss_pred cCCccCCeecccCcEEEEEEEEc---CCCcEEEEEEeccc------ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 746 (851)
++|+..+.||+|+||.||+|++. .+++.||||++.+. .....+.+|+++++.++||||+++++++..++..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 47899999999999999999985 67889999998654 2345577899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 97 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 97 YLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 9999999999999999764 34788889999999999999999 779999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+....... ......||+.|+|||
T Consensus 169 ~~~~~~~~--~~~~~~gt~~y~aPE 191 (327)
T 3a62_A 169 KESIHDGT--VTHTFCGTIEYMAPE 191 (327)
T ss_dssp ------------CTTSSCCTTSCHH
T ss_pred cccccCCc--cccccCCCcCccCHh
Confidence 86543322 123457999999998
No 127
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.95 E-value=8.6e-28 Score=261.14 Aligned_cols=168 Identities=21% Similarity=0.219 Sum_probs=147.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
.+|++.+.||+|+||.||+|++..+++.||||++......+.+.+|+++++++ +||||+++++++..++..|+||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 46899999999999999999999999999999987666566788999999999 9999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc-----eEEeeecCcccc
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-----PKIADFGVAKIA 829 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~~ 829 (851)
+++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+|+..
T Consensus 88 ~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 88 GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99999999863 346899999999999999999999 789999999999999998887 999999999876
Q ss_pred CCCCCcc-----cccccccccccccCC
Q 003065 830 ENSPKVS-----DYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~-----~~~~~~gt~~Y~APE 851 (851)
....... ......||+.|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE 187 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSIN 187 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred ecCCCCccccccccCCcCCCccccChH
Confidence 5443211 123567999999998
No 128
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.95 E-value=2.5e-27 Score=256.17 Aligned_cols=163 Identities=28% Similarity=0.419 Sum_probs=144.5
Q ss_pred CccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccCC
Q 003065 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (851)
Q Consensus 678 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 755 (851)
|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|+.++++++||||+++++++..++..|+||||+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 56677899999999999999889999999998643 4567789999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCCc
Q 003065 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (851)
Q Consensus 756 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 835 (851)
++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 127 ~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 197 (321)
T 2c30_A 127 GALTDIVSQ------VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197 (321)
T ss_dssp CBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred CCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc
Confidence 999998753 35889999999999999999999 789999999999999999999999999999876543222
Q ss_pred ccccccccccccccCC
Q 003065 836 SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 836 ~~~~~~~gt~~Y~APE 851 (851)
.....||+.|+|||
T Consensus 198 --~~~~~gt~~y~aPE 211 (321)
T 2c30_A 198 --RKSLVGTPYWMAPE 211 (321)
T ss_dssp --BCCCCSCGGGCCHH
T ss_pred --cccccCCccccCHh
Confidence 23457999999998
No 129
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.95 E-value=6.3e-28 Score=258.22 Aligned_cols=166 Identities=32% Similarity=0.396 Sum_probs=140.7
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----------------------------cHHHHHHHHHHHH
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------------------------GVKVFAAEMEILG 726 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------------------------~~~~~~~E~~~l~ 726 (851)
+++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357999999999999999999999999999999985432 1245789999999
Q ss_pred cCCCCccccEEEEEEe--CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeC
Q 003065 727 KIRHRNILKLYACLLK--GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRD 804 (851)
Q Consensus 727 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrD 804 (851)
+++||||+++++++.. .+..|+||||+++++|.+++. ...+++..+..++.|+++||+||| +.+|+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccC
Confidence 9999999999999986 567899999999999876432 346899999999999999999999 77999999
Q ss_pred CCCCCEEECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 805 IKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 805 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|||+||+++.++.+||+|||+++........ .....||+.|+|||
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE 207 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAPE 207 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCGG
T ss_pred CCHHHEEECCCCCEEEecCCCcccccccccc--ccCCcCCccccChh
Confidence 9999999999999999999999876544322 23357999999998
No 130
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.3e-27 Score=256.55 Aligned_cols=168 Identities=29% Similarity=0.419 Sum_probs=146.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCC--eeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 750 (851)
.+|.+.+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+ ..|+||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 3688999999999999999999999999999998653 34677889999999999999999999988765 779999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE----CCCCceEEeeecCc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVA 826 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla 826 (851)
||+++++|.+++..... ...+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|
T Consensus 89 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp ECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred eCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 99999999999986522 234899999999999999999999 7899999999999999 77888999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+........ ....||+.|+|||
T Consensus 164 ~~~~~~~~~---~~~~gt~~y~aPE 185 (319)
T 4euu_A 164 RELEDDEQF---VSLYGTEEYLHPD 185 (319)
T ss_dssp EECCTTCCB---CCCCSCGGGCCHH
T ss_pred eecCCCCce---eecccCCCccCHH
Confidence 877654332 2357999999998
No 131
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.94 E-value=6.2e-28 Score=267.07 Aligned_cols=169 Identities=26% Similarity=0.338 Sum_probs=144.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
++|...+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 36888999999999999999998899999999986542 234678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 832 (851)
+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 194 ~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 194 VQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred CCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999864 235788999999999999999999 789999999999999999999999999999865443
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
..........+++.|+|||
T Consensus 267 ~~~~~~~~~~~~~~y~aPE 285 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPE 285 (377)
T ss_dssp EEECCSSCCEEEGGGSCHH
T ss_pred ceeecCCCCCCCcCcCCHh
Confidence 2111111234678899998
No 132
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.94 E-value=1e-27 Score=262.24 Aligned_cols=165 Identities=33% Similarity=0.440 Sum_probs=130.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccCC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 755 (851)
++|++.+.||+|+||.||+|++..+++.||||++......+.+.+|++++++++||||+++++++..++..|+||||+++
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 46889999999999999999999999999999998776677888999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---CCceEEeeecCccccCCC
Q 003065 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVAKIAENS 832 (851)
Q Consensus 756 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~ 832 (851)
|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 133 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 133 GELFDRIVE-----KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999998864 245889999999999999999999 779999999999999975 889999999999876543
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
.. .....||+.|+|||
T Consensus 205 ~~---~~~~~gt~~y~aPE 220 (349)
T 2w4o_A 205 VL---MKTVCGTPGYCAPE 220 (349)
T ss_dssp -----------CGGGSCHH
T ss_pred cc---cccccCCCCccCHH
Confidence 22 23357999999998
No 133
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.94 E-value=1.6e-27 Score=258.14 Aligned_cols=169 Identities=28% Similarity=0.477 Sum_probs=142.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCc---EEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+|++.+.||+|+||.||+|++..+++ .||||++... ...+.+.+|++++++++||||+++++++..++..|+|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 468899999999999999999975554 4999998754 2356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred eeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999998653 346899999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCc-ccccccccccccccCC
Q 003065 830 ENSPKV-SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~-~~~~~~~gt~~Y~APE 851 (851)
...... .......||+.|+|||
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE 224 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPE 224 (325)
T ss_dssp C----CCEECC---CCGGGSCHH
T ss_pred ccCccceeeccCCCCcccccCHh
Confidence 554322 1222345688999998
No 134
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.94 E-value=1.5e-27 Score=262.28 Aligned_cols=165 Identities=28% Similarity=0.331 Sum_probs=138.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
.+|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+.+++.++||||+++++++..++..|+||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 4799999999999999999999999999999998654 334678899999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc--eEEeeecCccccCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--PKIADFGVAKIAENS 832 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~~~~ 832 (851)
+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+|+.....
T Consensus 100 ~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 100 GGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 99999999764 35889999999999999999999 789999999999999987765 999999999754332
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
.. .....||+.|+|||
T Consensus 172 ~~---~~~~~gt~~y~aPE 187 (361)
T 3uc3_A 172 SQ---PKSTVGTPAYIAPE 187 (361)
T ss_dssp ------------CTTSCHH
T ss_pred CC---CCCCcCCCCcCChh
Confidence 22 23357999999998
No 135
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.94 E-value=1.5e-27 Score=270.26 Aligned_cols=166 Identities=31% Similarity=0.471 Sum_probs=148.1
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+.+|.+.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++...+..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 35789999999999999999999999999999998643 2356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++.+ ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 95 ~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 95 MEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 999999999998864 345899999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....+||+.|+|||
T Consensus 167 ~~~~~---~~~~~gt~~y~aPE 185 (476)
T 2y94_A 167 SDGEF---LRTSCGSPNYAAPE 185 (476)
T ss_dssp CTTCC---BCCCCSCSTTCCHH
T ss_pred ccccc---ccccCCCcCeEChh
Confidence 55432 23357999999998
No 136
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.94 E-value=2.6e-27 Score=261.97 Aligned_cols=166 Identities=23% Similarity=0.312 Sum_probs=146.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
+.|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++||||+++++++.+.+..|+||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 57999999999999999999999999999999986543 3456889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC--CCceEEeeecCccccCC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAEN 831 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~ 831 (851)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+|+....
T Consensus 131 ~gg~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 131 SGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999988642 345899999999999999999999 789999999999999974 47899999999987755
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
.... ....||+.|+|||
T Consensus 204 ~~~~---~~~~gt~~y~aPE 220 (387)
T 1kob_A 204 DEIV---KVTTATAEFAAPE 220 (387)
T ss_dssp TSCE---EEECSSGGGCCHH
T ss_pred Ccce---eeeccCCCccCch
Confidence 4322 2347999999998
No 137
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.94 E-value=1.2e-27 Score=271.06 Aligned_cols=167 Identities=30% Similarity=0.386 Sum_probs=137.9
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+++|+..+.||+|+||.||+|++..+++.||||++... .....+.+|+++++.++||||+++++++...+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35799999999999999999999999999999998643 2345677899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-CCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
|||+++|+|.+++... ..+++..+..++.|++.||+||| + .+|+||||||+|||++.++.+||+|||+|+.
T Consensus 227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 9999999999998764 35889999999999999999999 5 7999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....+||+.|+|||
T Consensus 299 ~~~~~~--~~~~~~gt~~y~aPE 319 (446)
T 4ejn_A 299 GIKDGA--TMKTFCGTPEYLAPE 319 (446)
T ss_dssp TCC-------CCSSSCGGGCCHH
T ss_pred ccCCCc--ccccccCCccccCHh
Confidence 443322 233468999999998
No 138
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.94 E-value=1.3e-27 Score=258.67 Aligned_cols=171 Identities=38% Similarity=0.612 Sum_probs=147.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
.+|+..+.||+|+||.||+|++ .+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+||||+
T Consensus 39 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117 (321)
T ss_dssp CCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred hccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence 5899999999999999999997 46889999988654 34677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 833 (851)
++|+|.+++.... .....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 118 ~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 193 (321)
T 2qkw_B 118 ENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193 (321)
T ss_dssp TTCBTGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred CCCcHHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999998886431 12345899999999999999999999 7899999999999999999999999999998755433
Q ss_pred CcccccccccccccccCC
Q 003065 834 KVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 834 ~~~~~~~~~gt~~Y~APE 851 (851)
.........||+.|+|||
T Consensus 194 ~~~~~~~~~gt~~y~aPE 211 (321)
T 2qkw_B 194 QTHLSTVVKGTLGYIDPE 211 (321)
T ss_dssp CCCCBCCCEEETTTCCHH
T ss_pred ccccccccCCCccccCHH
Confidence 222233456999999998
No 139
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.94 E-value=1.3e-27 Score=271.95 Aligned_cols=167 Identities=25% Similarity=0.394 Sum_probs=131.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeC-----Cee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 746 (851)
++|++.+.||+|+||.||+|+++.+++.||||++... ...+++.+|++++++++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4799999999999999999999999999999998653 2456788999999999999999999998443 568
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||+ +++|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|
T Consensus 133 ~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEECCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 9999998 5799988864 345899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCc-------------------------ccccccccccccccCC
Q 003065 827 KIAENSPKV-------------------------SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~-------------------------~~~~~~~gt~~Y~APE 851 (851)
+........ ......+||++|+|||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 253 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHH
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChH
Confidence 876532210 1234567999999998
No 140
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.94 E-value=6.6e-28 Score=265.78 Aligned_cols=173 Identities=28% Similarity=0.337 Sum_probs=144.3
Q ss_pred cCCccCCeecccCcEEEEEEEE-----cCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
.+|++.+.||+|+||.||+|++ ..+++.||||++... .....+.+|+.++++++||||+++++++...+..|
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 4688999999999999999994 456778999998643 33456889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC---ceEEee
Q 003065 748 LVLEYMPNGNLFQALHKRVKE--GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKIAD 822 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~D 822 (851)
+||||+++|+|.+++...... ....+++..++.++.|+++||+||| +++|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 999999999999999875321 2245899999999999999999999 78999999999999999555 599999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+|+...............||+.|+|||
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE 256 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPE 256 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred CccccccccccccccCCCcCCcccEECHH
Confidence 99998654333223334457899999998
No 141
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=3e-27 Score=262.93 Aligned_cols=171 Identities=29% Similarity=0.442 Sum_probs=136.2
Q ss_pred cHHHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCC-CCccccEEEEEEeCC-
Q 003065 671 DAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIR-HRNILKLYACLLKGG- 744 (851)
Q Consensus 671 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~- 744 (851)
+.....+|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+.+++++. ||||+++++++...+
T Consensus 4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 445667999999999999999999999999999999998543 34566789999999997 999999999997644
Q ss_pred -eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeee
Q 003065 745 -SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (851)
Q Consensus 745 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 823 (851)
..|+||||++ ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+||
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DF 153 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADF 153 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred CEEEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCC
Confidence 6899999996 6899888752 5788889999999999999999 789999999999999999999999999
Q ss_pred cCccccCCCCC-------------------cccccccccccccccCC
Q 003065 824 GVAKIAENSPK-------------------VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~-------------------~~~~~~~~gt~~Y~APE 851 (851)
|+|+....... .......+||++|+|||
T Consensus 154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (388)
T 3oz6_A 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPE 200 (388)
T ss_dssp TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHH
T ss_pred cccccccccccccccccccccccccccccccccccCCcccCCcCCHH
Confidence 99986543111 11223468999999998
No 142
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.94 E-value=4.5e-27 Score=261.60 Aligned_cols=170 Identities=18% Similarity=0.205 Sum_probs=146.6
Q ss_pred cCCccCCeeccc--CcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSG--GTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+|++.+.||+| +||.||+|++..+++.||||++... ...+.+.+|+++++.++|||||++++++..++..|+|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 479999999999 9999999999999999999998654 2345678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||.+...
T Consensus 105 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 105 TSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999764 2345889999999999999999999 789999999999999999999999999998654
Q ss_pred CCCCCc-----ccccccccccccccCC
Q 003065 830 ENSPKV-----SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~-----~~~~~~~gt~~Y~APE 851 (851)
...... .......||+.|+|||
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE 205 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPE 205 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHH
T ss_pred ccccccccccccccccccccccccCHH
Confidence 322111 1112347999999998
No 143
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.94 E-value=7.6e-27 Score=246.93 Aligned_cols=165 Identities=28% Similarity=0.394 Sum_probs=147.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
++|++.+.||+|+||.||+|++..++..||+|++... ...+.+.+|++++++++||||+++++++..++..|+||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 4689999999999999999999999999999998653 45678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---CCCCceEEeeecCccccC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~ 830 (851)
++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||++....
T Consensus 89 ~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 89 TGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 999999998764 34789999999999999999999 7899999999999999 788899999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....||+.|+|||
T Consensus 161 ~~~~~---~~~~~t~~y~aPE 178 (277)
T 3f3z_A 161 PGKMM---RTKVGTPYYVSPQ 178 (277)
T ss_dssp TTSCB---CCCCSCTTTCCHH
T ss_pred Cccch---hccCCCCCccChH
Confidence 44322 2357999999998
No 144
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.94 E-value=1.5e-27 Score=260.71 Aligned_cols=173 Identities=29% Similarity=0.381 Sum_probs=145.5
Q ss_pred cCCccCCeecccCcEEEEEEEEc-----CCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
++|+..+.||+|+||.||+|++. .+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|
T Consensus 47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 126 (343)
T 1luf_A 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126 (343)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence 47899999999999999999986 345789999987543 3467889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCC
Q 003065 748 LVLEYMPNGNLFQALHKRVKE-------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSS 808 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~ 808 (851)
+||||+++|+|.+++...... ....+++..++.++.|+++||+||| +.+|+||||||+
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~ 203 (343)
T 1luf_A 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATR 203 (343)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcc
Confidence 999999999999999864211 1256899999999999999999999 789999999999
Q ss_pred CEEECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 809 NILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 809 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++.++.+||+|||+++...............||+.|+|||
T Consensus 204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE 246 (343)
T 1luf_A 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE 246 (343)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHH
T ss_pred eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChh
Confidence 9999999999999999998765433222233456899999998
No 145
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.94 E-value=2.6e-27 Score=266.93 Aligned_cols=167 Identities=28% Similarity=0.388 Sum_probs=141.4
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeC-----Cee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 746 (851)
++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++... +..
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 4799999999999999999999999999999998653 2356788999999999999999999999766 568
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||++ ++|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+|
T Consensus 106 ~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 99999995 699998864 345899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCc--------------------ccccccccccccccCC
Q 003065 827 KIAENSPKV--------------------SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~--------------------~~~~~~~gt~~Y~APE 851 (851)
+........ ......+||++|+|||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 221 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPE 221 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHH
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHH
Confidence 876543211 1234578999999998
No 146
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.94 E-value=6.1e-27 Score=253.58 Aligned_cols=160 Identities=27% Similarity=0.356 Sum_probs=127.6
Q ss_pred CCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCC-CCccccEEEEEEeCCeeEEEEeccCCCCHH
Q 003065 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEYMPNGNLF 759 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 759 (851)
.+.||+|+||.||+|++..+++.||||++... ....+.+|+++++.+. ||||+++++++.+++..|+||||+++|+|.
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 47899999999999999999999999998544 4566789999999997 999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC---ceEEeeecCccccCCCCCcc
Q 003065 760 QALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKIADFGVAKIAENSPKVS 836 (851)
Q Consensus 760 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~~~~~~~~ 836 (851)
+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++........
T Consensus 95 ~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~- 165 (325)
T 3kn6_A 95 ERIKKK-----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP- 165 (325)
T ss_dssp HHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-
Confidence 999763 45899999999999999999999 78999999999999998765 7999999999866543222
Q ss_pred cccccccccccccCC
Q 003065 837 DYSCFAGTHGYIAPG 851 (851)
Q Consensus 837 ~~~~~~gt~~Y~APE 851 (851)
.....||+.|+|||
T Consensus 166 -~~~~~~t~~y~aPE 179 (325)
T 3kn6_A 166 -LKTPCFTLHYAAPE 179 (325)
T ss_dssp ---------------
T ss_pred -ccccCCCcCccCHH
Confidence 23457899999998
No 147
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.94 E-value=3.1e-27 Score=260.66 Aligned_cols=163 Identities=25% Similarity=0.410 Sum_probs=138.1
Q ss_pred ccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccCCC
Q 003065 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNG 756 (851)
Q Consensus 679 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 756 (851)
...+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++...+..|+||||++++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3467899999999999999999999999998765 34567899999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE--CCCCceEEeeecCccccCCCCC
Q 003065 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL--DEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 757 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 172 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 172 ELFDRIIDE----SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp EEHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 999998753 235788999999999999999999 7899999999999999 5678999999999987755432
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
. ....||+.|+|||
T Consensus 245 ~---~~~~gt~~y~aPE 258 (373)
T 2x4f_A 245 L---KVNFGTPEFLAPE 258 (373)
T ss_dssp C---CCCCSSCTTCCHH
T ss_pred c---ccccCCCcEeChh
Confidence 2 2356999999998
No 148
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.94 E-value=1.7e-27 Score=255.94 Aligned_cols=167 Identities=35% Similarity=0.610 Sum_probs=134.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
.+|++.+.||+|+||.||+|++ +++.||||++.... ..+.+.+|++++++++||||+++++++...+..|+|||
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 4788999999999999999987 57889999986542 34568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|+++|+|.+++..... ...+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 115 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp CCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred cCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999975311 123889999999999999999999 678 999999999999999999999999999865
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ......||+.|+|||
T Consensus 190 ~~~~~--~~~~~~gt~~y~aPE 209 (309)
T 3p86_A 190 ASTFL--SSKSAAGTPEWMAPE 209 (309)
T ss_dssp --------------CCTTSCHH
T ss_pred ccccc--ccccCCCCccccChh
Confidence 44322 123457999999998
No 149
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.94 E-value=1.2e-27 Score=257.81 Aligned_cols=168 Identities=24% Similarity=0.365 Sum_probs=136.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCe----e
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGS----S 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~ 746 (851)
++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++...+. .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 47999999999999999999999999999999986541 23568899999999999999999999876543 4
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||+++++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred EEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 9999999999999999764 35889999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCc-ccccccccccccccCC
Q 003065 827 KIAENSPKV-SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~-~~~~~~~gt~~Y~APE 851 (851)
+........ .......||+.|+|||
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE 189 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPE 189 (311)
T ss_dssp ------------------CCTTCCHH
T ss_pred ccccccccccccccccCcCcccCCHH
Confidence 876543221 2233457999999998
No 150
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.94 E-value=1.7e-27 Score=261.97 Aligned_cols=173 Identities=31% Similarity=0.390 Sum_probs=144.7
Q ss_pred cCCccCCeecccCcEEEEEEE-----EcCCCcEEEEEEecccc---cHHHHHHHHHHHHcC-CCCccccEEEEEEeCCe-
Q 003065 676 CNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGGS- 745 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~- 745 (851)
++|++.+.||+|+||.||+|+ ...+++.||||++.... ..+.+.+|+++++++ +||||+++++++...+.
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 478999999999999999998 44566889999997643 345688999999999 79999999999887554
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCC--------------------------------------------------------
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEG-------------------------------------------------------- 769 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------------- 769 (851)
.|+||||+++|+|.+++.......
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 899999999999999998653210
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCCcccccccccc
Q 003065 770 -----KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGT 844 (851)
Q Consensus 770 -----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt 844 (851)
...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+...............||
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 258 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence 112888999999999999999999 789999999999999999999999999999876554443334456789
Q ss_pred cccccCC
Q 003065 845 HGYIAPG 851 (851)
Q Consensus 845 ~~Y~APE 851 (851)
+.|+|||
T Consensus 259 ~~y~aPE 265 (359)
T 3vhe_A 259 LKWMAPE 265 (359)
T ss_dssp GGGCCHH
T ss_pred ceeEChh
Confidence 9999998
No 151
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.94 E-value=4.4e-27 Score=249.87 Aligned_cols=169 Identities=25% Similarity=0.364 Sum_probs=143.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
++|.+.+.||+|+||.||+|++..++..||+|++... ...+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4789999999999999999999999999999998654 3467889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---CCCCceEEeeecCcccc
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIA 829 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~ 829 (851)
+++|+|.+++..... ....+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++..
T Consensus 102 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 102 CEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred CCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 999999999976432 2346889999999999999999999 7899999999999999 45678999999999866
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... .....||+.|+|||
T Consensus 178 ~~~~~---~~~~~~t~~y~aPE 196 (285)
T 3is5_A 178 KSDEH---STNAAGTALYMAPE 196 (285)
T ss_dssp ------------CTTGGGCCHH
T ss_pred CCccc---CcCcccccCcCChH
Confidence 54322 23357999999998
No 152
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.94 E-value=7.1e-27 Score=245.86 Aligned_cols=167 Identities=28% Similarity=0.364 Sum_probs=145.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++. ++..||||++... ...+.+.+|++++++++||||+++++++..++..|+||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 47889999999999999999885 5678999998665 356778999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+++|.+++... ...+++..++.++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 87 ~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 87 NGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 99999999775 235889999999999999999999 78999999999999999999999999999987655432
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
.. .....||+.|+|||
T Consensus 160 ~~-~~~~~~~~~y~aPE 175 (268)
T 3sxs_A 160 VS-SVGTKFPVKWSAPE 175 (268)
T ss_dssp EE-CCSCCCCGGGCCHH
T ss_pred hc-ccCCCcCcccCCHH
Confidence 22 23345788899998
No 153
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.94 E-value=1.7e-27 Score=259.06 Aligned_cols=167 Identities=32% Similarity=0.429 Sum_probs=146.8
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----------cHHHHHHHHHHHHcCCCCccccEEEEEEeC
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLLKG 743 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 743 (851)
...+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4467999999999999999999999999999999986542 233567899999999999999999999999
Q ss_pred CeeEEEEeccCCC-CHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEee
Q 003065 744 GSSFLVLEYMPNG-NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (851)
Q Consensus 744 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 822 (851)
+..++||||+.+| +|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECC
T ss_pred CEEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEee
Confidence 9999999999776 99998875 345899999999999999999999 78999999999999999999999999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++....... .....||+.|+|||
T Consensus 174 fg~a~~~~~~~~---~~~~~gt~~y~aPE 199 (335)
T 3dls_A 174 FGSAAYLERGKL---FYTFCGTIEYCAPE 199 (335)
T ss_dssp CTTCEECCTTCC---BCEECSCGGGCCHH
T ss_pred cccceECCCCCc---eeccCCCccccChh
Confidence 999987765432 23357999999998
No 154
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.94 E-value=4.8e-27 Score=252.83 Aligned_cols=166 Identities=27% Similarity=0.352 Sum_probs=141.5
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.++|++.+.||+|+||.||+|++. +++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 357899999999999999999994 58899999986432 2467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||++ +++.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+...
T Consensus 99 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 99 EFME-KDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp ECCS-EEHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred cCCC-CCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9997 5888887653 345889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... .....||+.|+|||
T Consensus 171 ~~~~~--~~~~~~t~~y~aPE 189 (311)
T 3niz_A 171 IPVRS--YTHEVVTLWYRAPD 189 (311)
T ss_dssp SCCC-----CCCCCCTTCCHH
T ss_pred CCccc--ccCCcccCCcCCHH
Confidence 43222 23357899999998
No 155
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.94 E-value=3.5e-27 Score=254.36 Aligned_cols=173 Identities=27% Similarity=0.356 Sum_probs=147.0
Q ss_pred cCCccCCeecccCcEEEEEEEEc-----CCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
.+|.+.+.||+|+||.||+|++. .++..||||++.... ..+.+.+|++++++++||||+++++++...+..|
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 46889999999999999999983 445789999986543 3467889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCC
Q 003065 748 LVLEYMPNGNLFQALHKRVKE-------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSS 808 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~ 808 (851)
+||||+++++|.+++...... ....+++..++.++.|+++||+||| +.+|+||||||+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp~ 179 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAAR 179 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGG
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccchh
Confidence 999999999999999875321 1234789999999999999999999 789999999999
Q ss_pred CEEECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 809 NILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 809 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++.++.+||+|||+++...............||+.|+|||
T Consensus 180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 222 (314)
T 2ivs_A 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE 222 (314)
T ss_dssp GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHH
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChh
Confidence 9999999999999999998776544333334456889999998
No 156
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.94 E-value=2.5e-27 Score=252.21 Aligned_cols=165 Identities=30% Similarity=0.398 Sum_probs=139.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
++|+..+.||+|+||.||+|++ .+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 4789999999999999999998 678999999985432 24678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++ +|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+....
T Consensus 81 ~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGI 152 (288)
T ss_dssp CCSE-EHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred ecCC-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence 9974 999888753 345888999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
... ......||+.|+|||
T Consensus 153 ~~~--~~~~~~~t~~y~aPE 170 (288)
T 1ob3_A 153 PVR--KYTHEIVTLWYRAPD 170 (288)
T ss_dssp -----------CCCTTCCHH
T ss_pred ccc--ccccccccccccCch
Confidence 322 123356899999998
No 157
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.94 E-value=6e-27 Score=259.72 Aligned_cols=173 Identities=29% Similarity=0.388 Sum_probs=147.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCC-------CcEEEEEEecccc---cHHHHHHHHHHHHcC-CCCccccEEEEEEeCC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKN-------AGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG 744 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 744 (851)
++|.+.+.||+|+||.||+|++... +..||||++.... ..+.+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 4688899999999999999997533 3579999986653 346688999999999 9999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~ 813 (851)
..|+||||+++|+|.+++...... ....+++..++.++.|++.||+||| +.+|+||||||+||+++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEc
Confidence 999999999999999999875321 1245899999999999999999999 78999999999999999
Q ss_pred CCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 814 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.++.+||+|||+|+...............||+.|+|||
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE 263 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 263 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHH
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHH
Confidence 99999999999998776544333344456899999998
No 158
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.94 E-value=7.5e-27 Score=247.28 Aligned_cols=165 Identities=35% Similarity=0.519 Sum_probs=143.3
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+++|++.+.||+|+||.||+|++..++..||||++... ...+.+.+|++++++++||||+++++++...+..|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 35789999999999999999999999999999998543 2356688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999999764 34788999999999999999999 789999999999999999999999999998655
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... .....||+.|+|||
T Consensus 160 ~~~~----~~~~~~~~~y~aPE 177 (279)
T 3fdn_A 160 PSSR----RTDLCGTLDYLPPE 177 (279)
T ss_dssp ------------CCCCTTCCHH
T ss_pred Cccc----ccccCCCCCccCHh
Confidence 4332 22357899999998
No 159
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=3e-27 Score=248.86 Aligned_cols=167 Identities=26% Similarity=0.374 Sum_probs=145.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++. +++.||+|++... ...+++.+|++++++++||||+++++++.+++..|+||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 36889999999999999999985 5778999998765 356789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+++|.+++... ...+++..++.++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 89 HGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCcHHHHHHhc----CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999753 345889999999999999999999 78999999999999999999999999999986654321
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
.......||+.|+|||
T Consensus 162 -~~~~~~~~~~~y~aPE 177 (269)
T 4hcu_A 162 -TSSTGTKFPVKWASPE 177 (269)
T ss_dssp -HSTTSTTCCGGGCCHH
T ss_pred -ccccCcccccccCCHH
Confidence 1222345788999998
No 160
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.94 E-value=2.7e-27 Score=261.28 Aligned_cols=169 Identities=30% Similarity=0.480 Sum_probs=133.5
Q ss_pred cCCccCCeecccCcEEEEEEEEc---CCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+|++.+.||+|+||.||+|++. .++..||||++... ...+.+.+|++++++++||||+++++++..++..|+|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 47899999999999999999986 45677999998654 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 125 ~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 9999999999999753 346899999999999999999999 779999999999999999999999999999876
Q ss_pred CCCCCcc-cccccccccccccCC
Q 003065 830 ENSPKVS-DYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~-~~~~~~gt~~Y~APE 851 (851)
....... ......+|+.|+|||
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE 220 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPE 220 (373)
T ss_dssp ----------------CTTSCHH
T ss_pred ccCCccceeccCCCcCCCccChh
Confidence 5442211 122234678899998
No 161
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.94 E-value=6.1e-27 Score=247.41 Aligned_cols=165 Identities=29% Similarity=0.431 Sum_probs=128.3
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+++|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 45899999999999999999999999999999998643 3356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+ ++++.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred ehhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceec
Confidence 9999 78898888653 45889999999999999999999 779999999999999999999999999999866
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ....||+.|+|||
T Consensus 163 ~~~~~~---~~~~~t~~y~aPE 181 (275)
T 2eue_A 163 TDGNFL---KTSCGSPNYAAPE 181 (275)
T ss_dssp ---------------CTTCCHH
T ss_pred cCcccc---cCCCCCcCcCCce
Confidence 544322 2346999999998
No 162
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.94 E-value=7.9e-27 Score=246.94 Aligned_cols=168 Identities=32% Similarity=0.452 Sum_probs=135.7
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+..|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45789999999999999999999989999999998543 2346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++++|.+++... ...+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 9999999999998753 346889999999999999999999 779999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....||+.|+|||
T Consensus 163 ~~~~~~--~~~~~~~~~y~aPE 182 (278)
T 3cok_A 163 KMPHEK--HYTLCGTPNYISPE 182 (278)
T ss_dssp C---------------------
T ss_pred cCCCCc--ceeccCCCCcCCcc
Confidence 543221 22356999999998
No 163
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.94 E-value=2.7e-27 Score=257.61 Aligned_cols=173 Identities=27% Similarity=0.381 Sum_probs=146.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCc-----EEEEEEecccc---cHHHHHHHHHHHHcC-CCCccccEEEEEEeCCee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG-----TVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 746 (851)
.+|+..+.||+|+||.||+|.+..+++ .||+|++.... ..+.+.+|+++++++ +||||+++++++..++..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 478899999999999999999876554 79999986553 356788999999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHHHHHhhhC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKE---------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~ 817 (851)
|+||||+++|+|.+++...... ....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGGE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCCe
Confidence 9999999999999999865321 1235789999999999999999999 779999999999999999999
Q ss_pred eEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 818 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+||+|||+++...............||+.|+|||
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 236 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 236 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHH
T ss_pred EEECccccccccccccceeecCCCCCCccccCHH
Confidence 9999999998765443333333456788999998
No 164
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.6e-31 Score=311.11 Aligned_cols=457 Identities=11% Similarity=0.082 Sum_probs=275.8
Q ss_pred CcccceeEecCCCCceEEEecccCCcceecC-ccccCCccCcEEeCCCCcccC---ccC------------cccccCCCC
Q 003065 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEIS-SSISALQSLTVLSLPFNVLSG---KLP------------LELSNCSNL 123 (851)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~-~~l~~l~~L~~L~L~~n~l~~---~~p------------~~~~~l~~L 123 (851)
|++|.++... ....+++.... +..+ ..+..+++|++|+|+++.... ..| .....+++|
T Consensus 34 ck~W~~~~~~----~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIERW----CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHHH----HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhh----hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 5688887221 23344444322 1122 345667888888888865321 111 123467788
Q ss_pred ceEecccCcccCCCCC-CC-CCCCCCeEeccCc-ccCCC-CcccccCccccceeecccccCCCCC---CcccccCCCCCC
Q 003065 124 KVLNVTGNAMVGSVPD-LS-ALKNLEIFDLSIN-YFTGR-FPRWVVNLTQLVSLSIGDNVYDEAE---IPESIGNLKNLT 196 (851)
Q Consensus 124 ~~L~Ls~n~l~~~~~~-l~-~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~ 196 (851)
++|+|++|.+++..+. +. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.++... ++.....+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 8888888877654433 43 5778888888877 44432 3333446778888888877765211 222233566788
Q ss_pred eEeccccc--cccc-CCcccccccccCccccccc-cccccccccccCCCcccEEEeecc-------CccCcCCcCcCCCC
Q 003065 197 YLFLAHCN--LRGR-IPESISELRELGTLDICRN-KISGEFPRSIRKLQKLWKIELYAN-------NLTGELPAELGNLT 265 (851)
Q Consensus 197 ~L~L~~n~--l~~~-~p~~~~~l~~L~~L~L~~N-~i~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~p~~~~~l~ 265 (851)
+|++++|. +... ++..+..+++|++|++++| .+.+ +|..+..+++|++|+++.+ .+.+ ++..+.+++
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~ 265 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCK 265 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCT
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCC
Confidence 88887776 2211 1111234577777777777 4443 6667777777777774433 3332 233556666
Q ss_pred cccEE-ecccccccCCCCccccCcCCccEEEccCCccCCCCCC-CCCCcccccEEEeccCcCCCC-CCCccCCCCcccee
Q 003065 266 LLQEF-DISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPS-GFGDMRKLFAFSIYGNRFSGP-FPENLGRYTALTDV 342 (851)
Q Consensus 266 ~L~~L-~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~-~p~~l~~l~~L~~L 342 (851)
+|+.| ++.+... +.++..+..+++|+.|++++|.+++.... .+..+++|+.|++++| ++.. ++.....+++|++|
T Consensus 266 ~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L 343 (594)
T 2p1m_B 266 ELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLREL 343 (594)
T ss_dssp TCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEE
T ss_pred CcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEE
Confidence 67666 3333322 23444444566777777777665432111 1345566666666665 3211 11112235566666
Q ss_pred eccCCcccccCchhhhhhcchHHHHhccCCccccccccc-cCccccceeccccCccccccCCccc-CccccceEEec--C
Q 003065 343 DISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSY-ADCKTIQRLRISDNHLSGKIPDGLW-ALPNVGMLDFG--D 418 (851)
Q Consensus 343 ~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~ 418 (851)
+++++.-.| ....+.+++.....+ ..+++|++|+++.|.+++..+..+. .+++|+.|+++ +
T Consensus 344 ~L~~~~~~g---------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~ 408 (594)
T 2p1m_B 344 RVFPSEPFV---------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIE 408 (594)
T ss_dssp EEECSCTTC---------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESS
T ss_pred EEecCcccc---------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeeccc
Confidence 663321000 001122222211222 2467899999988998877666665 48899999998 4
Q ss_pred ----CcCCCCCC-----cccccCCCCCeEecCCCcceeeCCccccc-CCCCcEEeccCccccCCCcccc-ccCCcccEEE
Q 003065 419 ----NDFTGGIS-----PLIGLSTSLSQLVLQNNRFSGELPSELGR-LTNLERLILTNNNFSGKIPSAL-GALRQLSSLH 487 (851)
Q Consensus 419 ----N~l~~~~~-----~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ 487 (851)
|++++.+. ..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+
T Consensus 409 ~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~ 487 (594)
T 2p1m_B 409 PKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLE 487 (594)
T ss_dssp TTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEE
T ss_pred CCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEE
Confidence 56664322 2356788999999987 777666666665 8999999999999976555555 6789999999
Q ss_pred ecCCcccCCCCC-CcccccccceeeccCcccccccCCCc-cccccCCeEeCCCCccc
Q 003065 488 LEENALTGSIPN-EMGDCARIVDLNLARNSLSGNIPRSL-SLLSSLNALNLSGNKLT 542 (851)
Q Consensus 488 Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~ 542 (851)
|++|.+++..+. .+..+++|+.|++++|.++......+ ..+++|+...+..+.-.
T Consensus 488 L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 488 IRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp EESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred CcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 999999654443 44568999999999999865544444 45778877777776544
No 165
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.94 E-value=1.2e-26 Score=247.82 Aligned_cols=170 Identities=26% Similarity=0.372 Sum_probs=148.8
Q ss_pred HHHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCee
Q 003065 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (851)
Q Consensus 672 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 746 (851)
.....+|...+.||+|+||.||+|++..+++.||+|++... ...+.+.+|+++++.++||||+++++++..++..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEE
Confidence 34456799999999999999999999999999999998543 2356788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||+++++|.+++... ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 162 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162 (294)
T ss_dssp EEEEECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCc
Confidence 9999999999999988764 35889999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+........ .....||+.|+|||
T Consensus 163 ~~~~~~~~~--~~~~~~~~~y~aPE 185 (294)
T 2rku_A 163 TKVEYDGER--KKVLCGTPNYIAPE 185 (294)
T ss_dssp EECCSTTCC--BCCCCSCCSSCCHH
T ss_pred eecccCccc--cccccCCCCcCCcc
Confidence 876543222 23357999999998
No 166
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.94 E-value=9e-27 Score=252.03 Aligned_cols=165 Identities=27% Similarity=0.363 Sum_probs=146.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--------cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++...+..|
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 46899999999999999999999999999999986532 3677999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC----ceEEeee
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIADF 823 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DF 823 (851)
+||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 92 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999875 245789999999999999999999 78999999999999999887 7999999
Q ss_pred cCccccCCCCCcccccccccccccccCC
Q 003065 824 GVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+++....... .....||+.|+|||
T Consensus 164 g~~~~~~~~~~---~~~~~gt~~y~aPE 188 (321)
T 2a2a_A 164 GLAHEIEDGVE---FKNIFGTPEFVAPE 188 (321)
T ss_dssp TTCEECCTTCC---CCCCCSCGGGCCHH
T ss_pred ccceecCcccc---ccccCCCCCccCcc
Confidence 99987665432 23357999999998
No 167
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.94 E-value=1e-26 Score=248.75 Aligned_cols=168 Identities=18% Similarity=0.220 Sum_probs=147.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
.+|++.+.||+|+||.||+|++..+++.||||++......+.+.+|+++++++ +|++++++++++..+...|+||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 36899999999999999999999999999999987766666788999999999 7999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc-----eEEeeecCcccc
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-----PKIADFGVAKIA 829 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~~ 829 (851)
+++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+|+..
T Consensus 89 ~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 89 GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99999999764 335899999999999999999999 889999999999999987776 999999999876
Q ss_pred CCCCCc-----ccccccccccccccCC
Q 003065 830 ENSPKV-----SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~-----~~~~~~~gt~~Y~APE 851 (851)
...... .......||+.|+|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE 188 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSIN 188 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred ccccccccccccCccCCCCCcccCCch
Confidence 654321 1223467999999998
No 168
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.5e-30 Score=304.90 Aligned_cols=434 Identities=15% Similarity=0.161 Sum_probs=294.7
Q ss_pred cEEeCCCCcccCccC-cccccCCCCceEecccCcccC---CCC------------C-CCCCCCCCeEeccCcccCCCCcc
Q 003065 100 TVLSLPFNVLSGKLP-LELSNCSNLKVLNVTGNAMVG---SVP------------D-LSALKNLEIFDLSINYFTGRFPR 162 (851)
Q Consensus 100 ~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~---~~~------------~-l~~l~~L~~L~Ls~N~l~~~~~~ 162 (851)
+.+++++... ..| ..+..+++|++|+|+++.... ..| . ...+++|++|+|++|.+++..+.
T Consensus 46 ~~l~~~~~~~--~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~ 123 (594)
T 2p1m_B 46 RKVFIGNCYA--VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLE 123 (594)
T ss_dssp CEEEESSTTS--SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHH
T ss_pred eEEeeccccc--cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHH
Confidence 3555554332 223 346788999999999986432 111 1 23678999999999998877777
Q ss_pred ccc-Cccccceeecccc-cCCCCCCcccccCCCCCCeEecccccccccCCcccc----cccccCcccccccc--cccc-c
Q 003065 163 WVV-NLTQLVSLSIGDN-VYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESIS----ELRELGTLDICRNK--ISGE-F 233 (851)
Q Consensus 163 ~~~-~l~~L~~L~L~~N-~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l~~L~~L~L~~N~--i~~~-~ 233 (851)
.+. .+++|++|+|++| .+....++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. +
T Consensus 124 ~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l 203 (594)
T 2p1m_B 124 LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSAL 203 (594)
T ss_dssp HHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHH
T ss_pred HHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHH
Confidence 775 6889999999888 454223455556789999999999998766555444 56689999998886 3211 2
Q ss_pred cccccCCCcccEEEeecc-CccCcCCcCcCCCCcccEEecccc-------cccCCCCccccCcCCccEE-EccCCccCCC
Q 003065 234 PRSIRKLQKLWKIELYAN-NLTGELPAELGNLTLLQEFDISSN-------QMYGKLPEEIGNLKNLTVF-QCFKNNFSGE 304 (851)
Q Consensus 234 p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N-------~l~~~~p~~l~~l~~L~~L-~l~~N~l~~~ 304 (851)
+..+.++++|++|++++| .+. .+|..+..+++|++|+++.+ .+.+ ++..+.++++|+.| .+.+... +.
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~ 280 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AY 280 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GG
T ss_pred HHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hh
Confidence 223355688999999888 444 36777778888888885443 3443 34467778888887 3333222 23
Q ss_pred CCCCCCCcccccEEEeccCcCCCCCC-CccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccC
Q 003065 305 FPSGFGDMRKLFAFSIYGNRFSGPFP-ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYAD 383 (851)
Q Consensus 305 ~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~ 383 (851)
++..+..+++|+.|++++|.+++... ..+..+++|+.|++++| +.+. .++.....
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~-----------------------~l~~l~~~ 336 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDA-----------------------GLEVLAST 336 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHH-----------------------HHHHHHHH
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHH-----------------------HHHHHHHh
Confidence 33334456778888888777653322 22456777777777776 3311 11112234
Q ss_pred ccccceecc---------ccCccccccCCccc-CccccceEEecCCcCCCCCCcccc-cCCCCCeEecC--C----Ccce
Q 003065 384 CKTIQRLRI---------SDNHLSGKIPDGLW-ALPNVGMLDFGDNDFTGGISPLIG-LSTSLSQLVLQ--N----NRFS 446 (851)
Q Consensus 384 l~~L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~-~~~~L~~L~Ls--~----N~l~ 446 (851)
+++|++|++ +.|.+++.....+. ++++|+.|+++.|++++.....+. .+++|+.|+|+ + |.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 678899988 44566654444443 489999999999999876555554 58999999999 4 6666
Q ss_pred ee-----CCcccccCCCCcEEeccCccccCCCcccccc-CCcccEEEecCCcccCCCCCCc-ccccccceeeccCccccc
Q 003065 447 GE-----LPSELGRLTNLERLILTNNNFSGKIPSALGA-LRQLSSLHLEENALTGSIPNEM-GDCARIVDLNLARNSLSG 519 (851)
Q Consensus 447 ~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 519 (851)
+. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 22 223367789999999988 777655556655 8999999999999976655555 678999999999999976
Q ss_pred ccCC-CccccccCCeEeCCCCccccccCccc-ccc-cceEEeCcCCc
Q 003065 520 NIPR-SLSLLSSLNALNLSGNKLTGSIPDNL-MKL-KLSSIDLSENQ 563 (851)
Q Consensus 520 ~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~l-~~l-~L~~l~ls~N~ 563 (851)
..+. ....+++|+.|++++|+++......+ ..+ .++...+..+.
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 5544 44568999999999999965443334 223 45555555554
No 169
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.94 E-value=5e-27 Score=254.69 Aligned_cols=173 Identities=43% Similarity=0.739 Sum_probs=147.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
++|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+|+++++.++||||+++++++...+..++||||
T Consensus 30 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 108 (326)
T 3uim_A 30 DNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108 (326)
T ss_dssp TSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEEC
T ss_pred hccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEe
Confidence 5799999999999999999986 468899999986543 223688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 832 (851)
+++|+|.+++.... .....+++..+..++.|++.||+|||..+..+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 109 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 109 MANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred ccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 99999999998642 23445899999999999999999999543349999999999999999999999999999876543
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
... ......||+.|+|||
T Consensus 188 ~~~-~~~~~~gt~~y~aPE 205 (326)
T 3uim_A 188 DTH-VTTAVRGTIGHIAPE 205 (326)
T ss_dssp SSC-EECCCCSCGGGCCHH
T ss_pred ccc-ccccccCCcCccCHH
Confidence 322 223456999999998
No 170
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.94 E-value=8.9e-27 Score=250.89 Aligned_cols=167 Identities=23% Similarity=0.374 Sum_probs=140.3
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccccc----HHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
+++|+..+.||+|+||.||+|++..+++.||||++..... .+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 3579999999999999999999999999999998865432 456789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||++++++.+++.. ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+...
T Consensus 82 e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 99999998887754 245889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... .....||+.|+|||
T Consensus 154 ~~~~~--~~~~~~~~~y~aPE 172 (311)
T 4agu_A 154 GPSDY--YDDEVATRWYRSPE 172 (311)
T ss_dssp --------------GGGCCHH
T ss_pred Ccccc--cCCCcCCccccChH
Confidence 43322 23357899999998
No 171
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.94 E-value=3.6e-27 Score=255.76 Aligned_cols=168 Identities=23% Similarity=0.344 Sum_probs=137.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcE----EEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGT----VAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
.+|+..+.||+|+||.||+|++..+++. ||+|.+... ...+.+.+|++++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 4688999999999999999998777665 577776433 34577899999999999999999999998754 789
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
|+||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 94 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999999999763 346889999999999999999999 77999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..............||+.|+|||
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE 189 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALE 189 (327)
T ss_dssp HTTTCC-------CCCGGGSCHH
T ss_pred ccCCcccccccCCCccccccChH
Confidence 76554443334456788999998
No 172
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.94 E-value=4.5e-27 Score=254.64 Aligned_cols=173 Identities=24% Similarity=0.346 Sum_probs=129.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCc---EEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCee--
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS-- 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 746 (851)
.+|+..+.||+|+||.||+|++..++. .||||++... ...+.+.+|++++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 378999999999999999999877665 7999998643 3457789999999999999999999999876655
Q ss_pred ----EEEEeccCCCCHHHHHHHhhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEe
Q 003065 747 ----FLVLEYMPNGNLFQALHKRVKE-GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (851)
Q Consensus 747 ----~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 821 (851)
|+||||+++|+|.+++...... ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEEe
Confidence 9999999999999999765432 2235899999999999999999999 7899999999999999999999999
Q ss_pred eecCccccCCCCCcccccccccccccccCC
Q 003065 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 822 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|||+|+...............+|+.|+|||
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE 209 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALE 209 (323)
T ss_dssp CCCC-----------------CCGGGCCHH
T ss_pred eccccccccccccccccccccCcccccCch
Confidence 999998765544333333446788999998
No 173
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.94 E-value=1.2e-26 Score=252.62 Aligned_cols=171 Identities=26% Similarity=0.379 Sum_probs=149.7
Q ss_pred cHHHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCe
Q 003065 671 DAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (851)
Q Consensus 671 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 745 (851)
+.....+|.+.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 115 (335)
T 2owb_A 36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 115 (335)
T ss_dssp ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe
Confidence 334456899999999999999999999999999999998643 245678899999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecC
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 825 (851)
.|+||||+++++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~lv~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 187 (335)
T 2owb_A 116 VFVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187 (335)
T ss_dssp EEEEECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccC
Confidence 99999999999999988764 35889999999999999999999 77999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++........ .....||+.|+|||
T Consensus 188 ~~~~~~~~~~--~~~~~gt~~y~aPE 211 (335)
T 2owb_A 188 ATKVEYDGER--KKVLCGTPNYIAPE 211 (335)
T ss_dssp CEECCSTTCC--BCCCCSCCSSCCHH
T ss_pred ceecccCccc--ccccCCCccccCHH
Confidence 9876543222 23357999999998
No 174
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.94 E-value=1.8e-26 Score=245.03 Aligned_cols=165 Identities=28% Similarity=0.417 Sum_probs=145.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 47899999999999999999999999999999986542 34668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc---eEEeeecCccc
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFGVAKI 828 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~ 828 (851)
|+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||.+..
T Consensus 86 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 86 LVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred cCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999988764 35889999999999999999999 789999999999999986655 99999999987
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....||+.|+|||
T Consensus 158 ~~~~~~---~~~~~~~~~y~aPE 177 (284)
T 3kk8_A 158 VNDSEA---WHGFAGTPGYLSPE 177 (284)
T ss_dssp CCSSCB---CCCSCSCGGGCCHH
T ss_pred cccCcc---ccCCCCCcCCcCch
Confidence 654432 23357999999998
No 175
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.94 E-value=2.8e-27 Score=252.81 Aligned_cols=169 Identities=28% Similarity=0.422 Sum_probs=139.0
Q ss_pred cCCccCCeecccCcEEEEEEE----EcCCCcEEEEEEecccc--cHHHHHHHHHHHHcCCCCccccEEEEEEeC--CeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 747 (851)
.+|++.+.||+|+||.||+|+ +..+++.||||++.... ..+.+.+|++++++++||||+++++++... ...|
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 478899999999999999998 45678899999986543 346788999999999999999999998653 5589
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 90 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 999999999999999764 235889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCc-ccccccccccccccCC
Q 003065 828 IAENSPKV-SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~Y~APE 851 (851)
........ .......||+.|+|||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE 187 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPE 187 (295)
T ss_dssp -------------CTTCGGGGCCHH
T ss_pred cccCCcceeeeccCCCCccceeCcH
Confidence 76543321 1122345788899998
No 176
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.94 E-value=1e-26 Score=254.15 Aligned_cols=161 Identities=34% Similarity=0.516 Sum_probs=142.5
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
.|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 588889999999999999999999999999998643 223568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|++ |++.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 135 ~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 135 YCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp CCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred cCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 996 6888888654 346889999999999999999999 67999999999999999999999999999986543
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
. ....||+.|+|||
T Consensus 207 ~------~~~~gt~~y~aPE 220 (348)
T 1u5q_A 207 A------NSFVGTPYWMAPE 220 (348)
T ss_dssp B------CCCCSCGGGCCHH
T ss_pred C------CcccCCcceeCHh
Confidence 2 2357999999998
No 177
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.94 E-value=7.1e-27 Score=260.26 Aligned_cols=165 Identities=26% Similarity=0.359 Sum_probs=133.5
Q ss_pred HcCCccC-CeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHH-cCCCCccccEEEEEEe----CCeeEE
Q 003065 675 ICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILG-KIRHRNILKLYACLLK----GGSSFL 748 (851)
Q Consensus 675 ~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~~l 748 (851)
+.+|.+. +.||+|+||+||+|.+..+++.||||++... ..+.+|++++. ..+||||+++++++.. .+..|+
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 3567765 6899999999999999999999999998643 45678998874 4589999999998875 567899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---CCceEEeeecC
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGV 825 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl 825 (851)
||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+
T Consensus 137 v~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 99999999999999753 2345899999999999999999999 789999999999999997 78999999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+....... ....+||+.|+|||
T Consensus 211 a~~~~~~~~---~~~~~gt~~y~aPE 233 (400)
T 1nxk_A 211 AKETTSHNS---LTTPCYTPYYVAPE 233 (400)
T ss_dssp CEECC--------------CTTCCGG
T ss_pred ccccCCCCc---cccCCCCCCccCHh
Confidence 987654322 23457999999998
No 178
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.94 E-value=7.9e-27 Score=276.25 Aligned_cols=168 Identities=29% Similarity=0.384 Sum_probs=147.7
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 747 (851)
.+.+|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+..|.+++..+ +||+|+++++++++.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 346899999999999999999999999999999998643 3456678899999988 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+
T Consensus 419 lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999999864 35889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... .....+||+.|||||
T Consensus 491 ~~~~~~~--~~~~~~GT~~Y~APE 512 (674)
T 3pfq_A 491 ENIWDGV--TTKTFCGTPDYIAPE 512 (674)
T ss_dssp ECCCTTC--CBCCCCSCSSSCCHH
T ss_pred ccccCCc--ccccccCCCcccCHh
Confidence 6443322 234468999999998
No 179
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.94 E-value=8.1e-27 Score=254.08 Aligned_cols=165 Identities=27% Similarity=0.336 Sum_probs=141.5
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEEEecc
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
.++|+..+.||+|+||.||+|+++.+++.||||++.+... ...+|++++.++ +||||+++++++.+++..|+||||+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 98 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM 98 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence 3478999999999999999999999999999999865432 235788888888 7999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC----CceEEeeecCcccc
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED----YEPKIADFGVAKIA 829 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~~ 829 (851)
++|+|.+++.+. ..+++..+..++.|++.||+||| +.+|+||||||+||++.++ +.+||+|||+|+..
T Consensus 99 ~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 99 KGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999998753 35889999999999999999999 7899999999999998533 35999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ....+||+.|+|||
T Consensus 171 ~~~~~~--~~~~~gt~~y~aPE 190 (342)
T 2qr7_A 171 RAENGL--LMTPCYTANFVAPE 190 (342)
T ss_dssp BCTTCC--BCCSSCCSSCCCHH
T ss_pred cCCCCc--eeccCCCccccCHH
Confidence 544322 23457999999998
No 180
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.94 E-value=4.8e-27 Score=269.08 Aligned_cols=169 Identities=25% Similarity=0.391 Sum_probs=148.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
.+|+..+.||+|+||.||+|++..++..||||++... ...+.+.+|++++++++||||+++++++...+..|+||||++
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~ 299 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 299 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccC
Confidence 3678889999999999999999888999999998654 457789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+|+|.+++... ....+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 300 ~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 300 YGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp TCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred CCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 99999999763 3346889999999999999999999 78999999999999999999999999999987654322
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
.......+++.|+|||
T Consensus 374 -~~~~~~~~~~~y~aPE 389 (495)
T 1opk_A 374 -TAHAGAKFPIKWTAPE 389 (495)
T ss_dssp -ECCTTCCCCGGGCCHH
T ss_pred -eecCCCcCCcceeCHh
Confidence 2223345678999998
No 181
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.94 E-value=6e-27 Score=247.52 Aligned_cols=170 Identities=29% Similarity=0.400 Sum_probs=148.5
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.+++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++..++..|+||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 356899999999999999999999989999999998543 34577889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++...
T Consensus 85 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 85 EYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp ECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999887753 345889999999999999999999 7899999999999999999999999999998665
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
............||+.|+|||
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE 177 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPE 177 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGG
T ss_pred CCcchhcccCCccccCccChH
Confidence 433222234467999999998
No 182
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.94 E-value=1.5e-26 Score=247.85 Aligned_cols=169 Identities=28% Similarity=0.395 Sum_probs=144.0
Q ss_pred cCCccCCeecccCcEEEEEEE----EcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeC--Cee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 746 (851)
..|+..+.||+|+||.||+|+ +..+++.||||++... ...+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 358899999999999999999 4568889999998654 3457789999999999999999999999876 668
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 101 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccc
Confidence 9999999999999999764 345889999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCc-ccccccccccccccCC
Q 003065 827 KIAENSPKV-SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~-~~~~~~~gt~~Y~APE 851 (851)
+........ .......||+.|+|||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE 199 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPE 199 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHH
T ss_pred ccccCCCcceeccCCCCCCccccCCe
Confidence 877654322 1223456899999998
No 183
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.94 E-value=1.7e-26 Score=245.56 Aligned_cols=168 Identities=21% Similarity=0.296 Sum_probs=145.2
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 748 (851)
...+|++.+.||+|+||.||+|++..+++.||||++... .....+.+|+..+..+ +||||+++++++..++..|+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 345799999999999999999999989999999998653 3456788999999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC-------------
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED------------- 815 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~------------- 815 (851)
||||+++++|.+++..... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 9999999999999987532 2245889999999999999999999 7899999999999999844
Q ss_pred ------CceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 816 ------YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 816 ------~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..+||+|||.++....... ..||+.|+|||
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~~------~~gt~~y~aPE 200 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQV------EEGDSRFLANE 200 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSCC------CCCCGGGCCHH
T ss_pred cccCCceEEEEcccccccccCCccc------cCCCccccChh
Confidence 4799999999987654322 35899999998
No 184
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=2.1e-26 Score=253.36 Aligned_cols=164 Identities=24% Similarity=0.299 Sum_probs=144.4
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCC-----CCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIR-----HRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv 749 (851)
++|++.+.||+|+||.||+|++..+++.||||++... ...+.+..|+++++.++ ||||+++++++...+..|+|
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv 114 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLI 114 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEE
Confidence 4799999999999999999999999999999998653 34566788999999986 99999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---------------
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--------------- 814 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~--------------- 814 (851)
|||+ +++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 115 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 115 FEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp ECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred EcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcccc
Confidence 9999 99999999864 2345889999999999999999999 789999999999999975
Q ss_pred ----------CCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 815 ----------DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 815 ----------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++.+||+|||+|+...... ....||+.|+|||
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE 229 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPE 229 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHH
T ss_pred cccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcH
Confidence 7899999999998654332 2357999999998
No 185
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.94 E-value=2.1e-26 Score=264.94 Aligned_cols=165 Identities=32% Similarity=0.435 Sum_probs=144.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---------------ccHHHHHHHHHHHHcCCCCccccEEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---------------DGVKVFAAEMEILGKIRHRNILKLYACL 740 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---------------~~~~~~~~E~~~l~~l~h~niv~l~~~~ 740 (851)
.+|.+.+.||+|+||.||+|+++.+++.||||++... ...+.+.+|++++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 5799999999999999999999999999999998643 2346788999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC---c
Q 003065 741 LKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---E 817 (851)
Q Consensus 741 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~---~ 817 (851)
..++..|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSS
T ss_pred EcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999998764 35889999999999999999999 78999999999999998776 6
Q ss_pred eEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 818 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+||+|||+|+....... .....||+.|+|||
T Consensus 188 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE 218 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPE 218 (504)
T ss_dssp EEECCCTTCEECCTTSC---BCCCCSCTTTCCHH
T ss_pred EEEEECCCCEEcCCCCc---cccccCCcCCCCHH
Confidence 99999999987765432 23357999999998
No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.94 E-value=5.5e-27 Score=252.66 Aligned_cols=173 Identities=29% Similarity=0.412 Sum_probs=147.5
Q ss_pred cCCccCCeecccCcEEEEEEEE-----cCCCcEEEEEEecccc---cHHHHHHHHHHHHcC-CCCccccEEEEEEeCCee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 746 (851)
.+|+..+.||+|+||.||+|++ ..+++.||||++.... ..+.+.+|+++++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 4788999999999999999985 3567789999987553 346788999999999 999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHHhhh-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC
Q 003065 747 FLVLEYMPNGNLFQALHKRVK-------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~ 813 (851)
|+||||+++|+|.+++..... .....+++..++.++.|+++||+||| +.+|+||||||+||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEc
Confidence 999999999999999987521 11235899999999999999999999 78999999999999999
Q ss_pred CCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 814 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.++.+||+|||+++...............||+.|+|||
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 217 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 217 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChH
Confidence 99999999999998776554433333456889999998
No 187
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=6.5e-27 Score=255.82 Aligned_cols=173 Identities=26% Similarity=0.368 Sum_probs=144.6
Q ss_pred cCCccCCeecccCcEEEEEEEEc-----CCCcEEEEEEeccc---ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 746 (851)
.+|+..+.||+|+||.||+|++. .++..||||++... ...+.+.+|+++++++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 47889999999999999999973 35667999998654 2346788999999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHHHHHhhhC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCC
Q 003065 747 FLVLEYMPNGNLFQALHKRVKE------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSS 808 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~ 808 (851)
|+||||+++|+|.+++...... ....+++..++.++.|++.||+||| +.+|+||||||+
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~ 201 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAAR 201 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGG
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChh
Confidence 9999999999999999864211 0124789999999999999999999 789999999999
Q ss_pred CEEECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 809 NILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 809 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++.++.+||+|||+++...............||+.|+|||
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE 244 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE 244 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHH
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHH
Confidence 9999999999999999998765544333333456889999998
No 188
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.94 E-value=6.5e-27 Score=260.71 Aligned_cols=168 Identities=29% Similarity=0.429 Sum_probs=145.4
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCC--eeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 750 (851)
.+|.+.+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+ ..|+||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 3688999999999999999999999999999998653 34677889999999999999999999998755 679999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE----CCCCceEEeeecCc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVA 826 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla 826 (851)
||+++|+|.+++..... ...+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|
T Consensus 89 e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp CCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred ecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 99999999999876422 234899999999999999999999 7899999999999999 77788999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+....... .....||+.|+|||
T Consensus 164 ~~~~~~~~---~~~~~gt~~y~aPE 185 (396)
T 4eut_A 164 RELEDDEQ---FVSLYGTEEYLHPD 185 (396)
T ss_dssp EECCCGGG---SSCSSSCCTTCCHH
T ss_pred eEccCCCc---cccccCCccccCHH
Confidence 87654322 23457999999998
No 189
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=3.1e-28 Score=265.32 Aligned_cols=159 Identities=18% Similarity=0.214 Sum_probs=133.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----------cHHHHHHHHHHHHcCC---------CCccccE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIR---------HRNILKL 736 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~---------h~niv~l 736 (851)
.+|++.+.||+|+||+||+|++ +++.||||++.... ..+.+.+|++++++++ |||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 5789999999999999999998 67899999986542 2377899999999885 7777777
Q ss_pred EEEEE------------------------------eCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHH
Q 003065 737 YACLL------------------------------KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAA 786 (851)
Q Consensus 737 ~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~ 786 (851)
.+.+. ..+..|+||||+++|++.+.+.+ ..+++..+..++.|++
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 76543 26789999999999977666532 3578999999999999
Q ss_pred HHHHHHHhCCCCCcEEeCCCCCCEEECCCC--------------------ceEEeeecCccccCCCCCcccccccccccc
Q 003065 787 KGIAYLHHDCSPPIIHRDIKSSNILLDEDY--------------------EPKIADFGVAKIAENSPKVSDYSCFAGTHG 846 (851)
Q Consensus 787 ~~l~~LH~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 846 (851)
.||+|||+ +.+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.
T Consensus 172 ~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDV 242 (336)
T ss_dssp HHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCC
T ss_pred HHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeec
Confidence 99999993 25899999999999999887 8999999999876532 2479999
Q ss_pred cccCC
Q 003065 847 YIAPG 851 (851)
Q Consensus 847 Y~APE 851 (851)
|||||
T Consensus 243 y~aPE 247 (336)
T 2vuw_A 243 SMDED 247 (336)
T ss_dssp TTCSG
T ss_pred ccChh
Confidence 99998
No 190
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.94 E-value=1.6e-26 Score=261.75 Aligned_cols=163 Identities=29% Similarity=0.462 Sum_probs=141.4
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeCC-eeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGG-SSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~ 754 (851)
.+|+..+.||+|+||.||+|++. ++.||||+++.....+.+.+|++++++++||||+++++++...+ ..|+||||++
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred HHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 46888999999999999999884 67999999987777788999999999999999999999987654 7899999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+|+|.+++... ....+++..+..++.|+++||+||| +++|+||||||+|||++.++.+||+|||+|+......
T Consensus 271 ~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 343 (450)
T 1k9a_A 271 KGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 343 (450)
T ss_dssp TCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-
Confidence 99999999875 2334788899999999999999999 7899999999999999999999999999998654321
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
....+++.|+|||
T Consensus 344 ----~~~~~~~~y~aPE 356 (450)
T 1k9a_A 344 ----DTGKLPVKWTAPE 356 (450)
T ss_dssp -------CCCTTTSCHH
T ss_pred ----cCCCCCcceeCHH
Confidence 1235788999998
No 191
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.94 E-value=1.4e-26 Score=265.41 Aligned_cols=166 Identities=32% Similarity=0.475 Sum_probs=145.8
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecc----cccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
..+|++.+.||+|+||.||+|++..+++.||||++.. ......+.+|++++++++||||+++++++...+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 4579999999999999999999999999999999853 245678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC---CCCceEEeeecCcc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIADFGVAK 827 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~ 827 (851)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++ .++.+||+|||+|+
T Consensus 101 e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999998764 35889999999999999999999 78999999999999995 45679999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... ....+||+.|+|||
T Consensus 173 ~~~~~~~---~~~~~gt~~y~aPE 193 (486)
T 3mwu_A 173 CFQQNTK---MKDRIGTAYYIAPE 193 (486)
T ss_dssp TBCCC-------CCTTGGGGCCGG
T ss_pred ECCCCCc---cCCCcCCCCCCCHH
Confidence 7654432 23357999999998
No 192
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.94 E-value=2.7e-26 Score=246.60 Aligned_cols=166 Identities=43% Similarity=0.651 Sum_probs=143.2
Q ss_pred ccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc------ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 679 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
...+.||+|+||.||+|++ +++.||||++... ...+.+.+|++++++++||||+++++++..++..|+||||
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 111 (307)
T 2nru_A 34 VGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111 (307)
T ss_dssp TTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred ccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEe
Confidence 3448999999999999986 5789999998542 2356789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 832 (851)
+++++|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 186 (307)
T 2nru_A 112 MPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186 (307)
T ss_dssp CTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred cCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeecccccccccc
Confidence 99999999997642 2346899999999999999999999 789999999999999999999999999999876554
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
..........||+.|+|||
T Consensus 187 ~~~~~~~~~~g~~~y~aPE 205 (307)
T 2nru_A 187 AQTVMTSRIVGTTAYMAPE 205 (307)
T ss_dssp SSCEECSSCCSCGGGCCHH
T ss_pred cccccccccCCCcCcCChH
Confidence 3332333457999999998
No 193
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.94 E-value=2.5e-26 Score=247.92 Aligned_cols=168 Identities=25% Similarity=0.353 Sum_probs=139.2
Q ss_pred cCCccC-CeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 751 (851)
..|.+. +.||+|+||.||+|++..+++.||||++... ...+.+.+|++++.++ +||||+++++++..++..|+|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 367774 7899999999999999999999999998654 3467889999999985 79999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc---eEEeeecCccc
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFGVAKI 828 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~ 828 (851)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.
T Consensus 92 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 92 KMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred cCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999864 35788999999999999999999 779999999999999998776 99999999976
Q ss_pred cCCCCC-----cccccccccccccccCC
Q 003065 829 AENSPK-----VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~-----~~~~~~~~gt~~Y~APE 851 (851)
...... ........||+.|+|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE 191 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPE 191 (316)
T ss_dssp ------------------CCSGGGCCHH
T ss_pred cccCCccccccccccccccCCcCccChH
Confidence 543211 11122356999999998
No 194
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.94 E-value=2e-26 Score=248.47 Aligned_cols=169 Identities=28% Similarity=0.404 Sum_probs=145.6
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
...+|++.+.||+|+||.||+|.+..+++.||||++......+.+.+|++++++++||||+++++++...+..|+||||+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 34579999999999999999999998999999999987777788999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 833 (851)
++++|.+++... ...+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||.++......
T Consensus 107 ~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 107 GAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp TTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred CCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 999999998753 346889999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccccccccccCC
Q 003065 834 KVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 834 ~~~~~~~~~gt~~Y~APE 851 (851)
. ......||+.|+|||
T Consensus 180 ~--~~~~~~~~~~y~aPE 195 (314)
T 3com_A 180 A--KRNTVIGTPFWMAPE 195 (314)
T ss_dssp S--CBCCCCSCGGGCCHH
T ss_pred c--ccCccCCCCCccChh
Confidence 2 123357999999998
No 195
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.94 E-value=1.4e-26 Score=252.06 Aligned_cols=173 Identities=29% Similarity=0.422 Sum_probs=145.2
Q ss_pred cCCccCCeecccCcEEEEEEEEc-------CCCcEEEEEEecccc---cHHHHHHHHHHHHcC-CCCccccEEEEEEeCC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG 744 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 744 (851)
++|++.+.||+|+||.||+|++. .++..||||++.... ..+.+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 47889999999999999999985 356789999986543 345688999999999 8999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~ 813 (851)
..|+||||+++|+|.+++...... ....+++..++.++.|+++||+||| +.+|+||||||+||+++
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVT 191 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEEc
Confidence 999999999999999999864221 1234889999999999999999999 78999999999999999
Q ss_pred CCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 814 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.++.+||+|||+++...............||+.|+|||
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 229 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHH
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChH
Confidence 99999999999998776544333334456789999998
No 196
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.94 E-value=2.7e-26 Score=252.67 Aligned_cols=167 Identities=28% Similarity=0.422 Sum_probs=147.1
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----------cHHHHHHHHHHHHcC-CCCccccEEEEEEe
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKI-RHRNILKLYACLLK 742 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 742 (851)
...+|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+++++++ +||||+++++++..
T Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 3457999999999999999999998899999999885432 135678999999999 79999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEee
Q 003065 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (851)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 822 (851)
.+..|+||||+++++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|
T Consensus 172 ~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 172 SSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred CCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEe
Confidence 99999999999999999999764 35889999999999999999999 67999999999999999999999999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||++........ .....||+.|+|||
T Consensus 244 fG~~~~~~~~~~---~~~~~gt~~y~aPE 269 (365)
T 2y7j_A 244 FGFSCHLEPGEK---LRELCGTPGYLAPE 269 (365)
T ss_dssp CTTCEECCTTCC---BCCCCSCGGGCCHH
T ss_pred cCcccccCCCcc---cccCCCCCCccChh
Confidence 999987765432 23367999999998
No 197
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.94 E-value=2.7e-26 Score=243.67 Aligned_cols=165 Identities=33% Similarity=0.508 Sum_probs=146.5
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
+++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 35789999999999999999999989999999998543 2356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999999764 25788999999999999999999 789999999999999999999999999999765
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....||+.|+|||
T Consensus 165 ~~~~~----~~~~~~~~y~aPE 182 (284)
T 2vgo_A 165 PSLRR----RTMCGTLDYLPPE 182 (284)
T ss_dssp SSSCB----CCCCSCGGGCCHH
T ss_pred ccccc----ccccCCCCcCCHH
Confidence 44321 2357999999998
No 198
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=248.63 Aligned_cols=167 Identities=27% Similarity=0.326 Sum_probs=140.8
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-------cHHHHHHHHHHHHcCC---CCccccEEEEEEeCC
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIR---HRNILKLYACLLKGG 744 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~ 744 (851)
..+|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|++++++++ ||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 358999999999999999999999999999999985321 2346678888887775 999999999998755
Q ss_pred -----eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceE
Q 003065 745 -----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (851)
Q Consensus 745 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 819 (851)
..++||||++ ++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEE
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEE
Confidence 4799999996 6999998763 2334899999999999999999999 78999999999999999999999
Q ss_pred EeeecCccccCCCCCcccccccccccccccCC
Q 003065 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 820 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+|||+|+....... .....||+.|+|||
T Consensus 161 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE 189 (308)
T 3g33_A 161 LADFGLARIYSYQMA---LTPVVVTLWYRAPE 189 (308)
T ss_dssp ECSCSCTTTSTTCCC---SGGGGCCCSSCCHH
T ss_pred EeeCccccccCCCcc---cCCccccccccCch
Confidence 999999987654332 23457999999998
No 199
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.94 E-value=8.9e-27 Score=247.23 Aligned_cols=167 Identities=22% Similarity=0.347 Sum_probs=142.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++. ++..||||++... ...+++.+|++++++++||||+++++++..++..|+||||++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 47889999999999999999885 6778999998765 356789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+++|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 103 NGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 99999999763 235889999999999999999999 78999999999999999999999999999986654321
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
.......||+.|+|||
T Consensus 176 -~~~~~~~~~~~y~aPE 191 (283)
T 3gen_A 176 -TSSVGSKFPVRWSPPE 191 (283)
T ss_dssp -HSTTSTTSCGGGCCHH
T ss_pred -ccccCCccCcccCCHH
Confidence 1122345788999998
No 200
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=5.1e-26 Score=240.48 Aligned_cols=212 Identities=22% Similarity=0.236 Sum_probs=152.8
Q ss_pred ecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-CCCCCCCCeEeccCcccCCCCcccccC
Q 003065 88 EISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVN 166 (851)
Q Consensus 88 ~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 166 (851)
.+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++.++. +..+++|++|+|++|.+++..+..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 3555443 5789999999999876667888999999999999988887764 888889999999999888777778888
Q ss_pred ccccceeecccccCCCCCCcccccCCCCCCeEeccccccccc-CCcccccccccCccccccccccccccccccCCCccc-
Q 003065 167 LTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGR-IPESISELRELGTLDICRNKISGEFPRSIRKLQKLW- 244 (851)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~- 244 (851)
+++|++|++++|.+. ...+..++.+++|++|++++|++++. +|..+.++++|++|++++|++++..+..|..+++|+
T Consensus 99 l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 177 (276)
T 2z62_A 99 LSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (276)
T ss_dssp CTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccc
Confidence 888888888888876 22233577788888888888888753 577777777788888887777766666666666665
Q ss_pred ---EEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCC
Q 003065 245 ---KIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSG 303 (851)
Q Consensus 245 ---~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (851)
.|++++|.+++..+..+. ..+|++|++++|++++..+..|.++++|+.|++++|.+.+
T Consensus 178 l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 178 LNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred cceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 667777777644444333 3356666666666665444445556666666666665553
No 201
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.94 E-value=1.7e-26 Score=265.14 Aligned_cols=165 Identities=32% Similarity=0.440 Sum_probs=142.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
.+|++.+.||+|+||.||+|+++.++..||||++... .....+.+|+++++.++||||+++++++...+..|+|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4689999999999999999999999999999998653 335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---CCceEEeeecCccc
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVAKI 828 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~ 828 (851)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+|+.
T Consensus 117 ~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 117 CYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred cCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999988764 35788899999999999999999 789999999999999976 45599999999987
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ....+||+.|+|||
T Consensus 189 ~~~~~~---~~~~~gt~~y~aPE 208 (494)
T 3lij_A 189 FENQKK---MKERLGTAYYIAPE 208 (494)
T ss_dssp CBTTBC---BCCCCSCTTTCCHH
T ss_pred CCCCcc---ccccCCCcCeeCHH
Confidence 765432 23357999999998
No 202
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94 E-value=6.3e-27 Score=249.06 Aligned_cols=169 Identities=26% Similarity=0.399 Sum_probs=148.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
.+|+..+.||+|+||.||+|.+..++..||+|++.... ..+.+.+|++++++++||||+++++++..++..|+||||++
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 92 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 92 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCC
Confidence 46889999999999999999999999999999986553 45778999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+++|.+++... ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 93 ~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 93 YGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp TEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred CCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999763 3456899999999999999999999 67999999999999999999999999999987664432
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
. ......||+.|+|||
T Consensus 167 ~-~~~~~~~~~~y~aPE 182 (288)
T 3kfa_A 167 T-AHAGAKFPIKWTAPE 182 (288)
T ss_dssp E-EETTEEECGGGCCHH
T ss_pred c-cccCCccccCcCChh
Confidence 2 223345788999998
No 203
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.94 E-value=3.8e-27 Score=255.44 Aligned_cols=168 Identities=25% Similarity=0.368 Sum_probs=139.4
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcE----EEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGT----VAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
.+|+..+.||+|+||.||+|++..+++. ||+|.+... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4788999999999999999999877765 777776433 22345678999999999999999999886 456899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 92 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence 99999999999998753 235778889999999999999999 77999999999999999999999999999998
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..............||+.|+|||
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE 187 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALE 187 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHH
T ss_pred cCcccccccccCCCCcccccChH
Confidence 76554443344567888999998
No 204
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.93 E-value=3.1e-26 Score=242.98 Aligned_cols=165 Identities=29% Similarity=0.395 Sum_probs=143.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--------cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 36889999999999999999999899999999885431 3678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC----ceEEeee
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIADF 823 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DF 823 (851)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999763 35789999999999999999999 78999999999999998877 7999999
Q ss_pred cCccccCCCCCcccccccccccccccCC
Q 003065 824 GVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|.++....... .....||+.|+|||
T Consensus 157 g~~~~~~~~~~---~~~~~~~~~y~aPE 181 (283)
T 3bhy_A 157 GIAHKIEAGNE---FKNIFGTPEFVAPE 181 (283)
T ss_dssp TTCEECC-----------CCCGGGCCHH
T ss_pred ccceeccCCCc---ccccCCCcCccCcc
Confidence 99987654332 22356999999998
No 205
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.93 E-value=2.2e-26 Score=246.51 Aligned_cols=167 Identities=32% Similarity=0.450 Sum_probs=138.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHc--CCCCccccEEEEEEe----CCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLK----GGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~lv 749 (851)
++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. ....|+|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 4789999999999999999988 6889999998654 44556677777766 799999999998654 3457999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCcEEeCCCCCCEEECCCCceEEeeec
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD-----CSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~kl~DFG 824 (851)
|||+++|+|.++++. ..+++..+++++.|++.|++|||.. ++++|+||||||+||+++.++.+||+|||
T Consensus 85 ~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 158 (301)
T 3q4u_A 85 THYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158 (301)
T ss_dssp ECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred hhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCC
Confidence 999999999999853 3589999999999999999999932 14699999999999999999999999999
Q ss_pred CccccCCCCCcc--cccccccccccccCC
Q 003065 825 VAKIAENSPKVS--DYSCFAGTHGYIAPG 851 (851)
Q Consensus 825 la~~~~~~~~~~--~~~~~~gt~~Y~APE 851 (851)
+|+......... ......||+.|+|||
T Consensus 159 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 187 (301)
T 3q4u_A 159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187 (301)
T ss_dssp TCEEEETTTTEEECCCCCCCCCGGGCCHH
T ss_pred CeeecccccccccccccccccccceeChh
Confidence 998765543321 122347999999998
No 206
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.93 E-value=6.6e-27 Score=249.05 Aligned_cols=163 Identities=21% Similarity=0.325 Sum_probs=142.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCC-------cEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNA-------GTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 746 (851)
++|.+.+.||+|+||.||+|++..++ ..||+|++... ...+.+.+|++++++++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 47889999999999999999998766 46999998543 4567789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc--------e
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--------P 818 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~--------~ 818 (851)
|+||||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++. +
T Consensus 88 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp EEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred EEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccccccee
Confidence 9999999999999999864 234788899999999999999999 789999999999999998877 9
Q ss_pred EEeeecCccccCCCCCcccccccccccccccCC
Q 003065 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 819 kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+|||+++..... ....||+.|+|||
T Consensus 161 kl~Dfg~~~~~~~~------~~~~~~~~y~aPE 187 (289)
T 4fvq_A 161 KLSDPGISITVLPK------DILQERIPWVPPE 187 (289)
T ss_dssp EECCCCSCTTTSCH------HHHHHTTTTSCHH
T ss_pred eeccCcccccccCc------cccCCcCcccCHH
Confidence 99999999755332 2245899999998
No 207
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.93 E-value=5.7e-27 Score=253.85 Aligned_cols=166 Identities=27% Similarity=0.359 Sum_probs=137.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccH---HHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGV---KVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
++|.+.+.||+|+||.||+|++..+++.||||++...... ..+.+|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 5789999999999999999999999999999998654322 1345799999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 832 (851)
++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 82 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 96 6999988764 345888999999999999999999 789999999999999999999999999999865533
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
.. ......||+.|+|||
T Consensus 154 ~~--~~~~~~~t~~y~aPE 170 (324)
T 3mtl_A 154 TK--TYDNEVVTLWYRPPD 170 (324)
T ss_dssp -----------CGGGCCHH
T ss_pred cc--ccccccCcccccChh
Confidence 22 223357899999998
No 208
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.93 E-value=5.5e-27 Score=265.98 Aligned_cols=163 Identities=33% Similarity=0.402 Sum_probs=134.9
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeC------C
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------G 744 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 744 (851)
.++|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 45899999999999999999999999999999998643 3456788999999999999999999999654 3
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeec
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 824 (851)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEE
Confidence 57999999965 56666532 3788899999999999999999 7899999999999999999999999999
Q ss_pred CccccCCCCCcccccccccccccccCC
Q 003065 825 VAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 825 la~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+|+....... ....+||++|+|||
T Consensus 210 ~a~~~~~~~~---~~~~~gt~~y~aPE 233 (464)
T 3ttj_A 210 LARTAGTSFM---MTPYVVTRYYRAPE 233 (464)
T ss_dssp CC-----CCC---C----CCCTTCCHH
T ss_pred eeeecCCCcc---cCCCcccccccCHH
Confidence 9987654322 23467999999998
No 209
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.93 E-value=1.4e-26 Score=245.76 Aligned_cols=168 Identities=30% Similarity=0.463 Sum_probs=145.2
Q ss_pred HHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEe----------
Q 003065 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK---------- 742 (851)
Q Consensus 673 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 742 (851)
....+|+..+.||+|+||.||+|++..+++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 34467999999999999999999998899999999986543 356789999999999999999998854
Q ss_pred ------CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC
Q 003065 743 ------GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (851)
Q Consensus 743 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~ 816 (851)
....|+||||+++++|.+++.... ...+++..++.++.|++.|+.||| +.+|+||||||+||+++.++
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCC
Confidence 445799999999999999998642 346889999999999999999999 77999999999999999999
Q ss_pred ceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 817 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.+||+|||+++........ ....||+.|+|||
T Consensus 160 ~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE 191 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPE 191 (284)
T ss_dssp EEEECCCTTCEESSCCSCC---CCCCSCCTTSCHH
T ss_pred CEEECcchhheeccccccc---cccCCcccccChh
Confidence 9999999999877654322 2346999999998
No 210
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=5.4e-27 Score=256.55 Aligned_cols=174 Identities=26% Similarity=0.312 Sum_probs=142.1
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-------ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
.++|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.+.+..|
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 45799999999999999999999999999999998542 34567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCC-----------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Q 003065 748 LVLEYMPNGNLFQALHKRVKEG-----------------------------------KPELDWFRRYKIALGAAKGIAYL 792 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~-----------------------------------~~~l~~~~~~~i~~~i~~~l~~L 792 (851)
+||||+++|+|.+++....... ...+++..+..++.|++.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999885321110 11235667788999999999999
Q ss_pred HhCCCCCcEEeCCCCCCEEECCCC--ceEEeeecCccccCCCCC--cccccccccccccccCC
Q 003065 793 HHDCSPPIIHRDIKSSNILLDEDY--EPKIADFGVAKIAENSPK--VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 793 H~~~~~~ivHrDlkp~NILl~~~~--~~kl~DFGla~~~~~~~~--~~~~~~~~gt~~Y~APE 851 (851)
| +.+|+||||||+||+++.++ .+||+|||+|+....... ........||+.|+|||
T Consensus 185 H---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 244 (345)
T 3hko_A 185 H---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244 (345)
T ss_dssp H---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred H---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence 9 77999999999999998776 899999999986543221 11223457999999998
No 211
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.93 E-value=3.3e-26 Score=245.61 Aligned_cols=170 Identities=26% Similarity=0.384 Sum_probs=143.6
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc------ccHHHHHHHHHHHHcCCCCccccEEEEEE--eCCee
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLL--KGGSS 746 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 746 (851)
+++|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999999999999999998643 34567899999999999999999999984 45678
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||++++ +.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+
T Consensus 84 ~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccc
Confidence 9999999866 77777653 3456889999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+...............||+.|+|||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE 181 (305)
T 2wtk_C 157 EALHPFAADDTCRTSQGSPAFQPPE 181 (305)
T ss_dssp EECCTTCSSCEECCCCSCGGGCCHH
T ss_pred cccCccccccccccCCCCCCCcChh
Confidence 8765433333333457999999998
No 212
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.93 E-value=3.6e-26 Score=241.55 Aligned_cols=165 Identities=29% Similarity=0.455 Sum_probs=139.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.+|.+.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 4789999999999999999999889999999998543 34567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 91 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 91 EYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp ECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred eccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999764 34788999999999999999999 6799999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... .....||+.|+|||
T Consensus 163 ~~~~---~~~~~~~~~y~aPE 180 (276)
T 2h6d_A 163 DGEF---LRTSCGSPNYAAPE 180 (276)
T ss_dssp C----------------CCTG
T ss_pred CCcc---eecccCCccccCHH
Confidence 4322 22346899999998
No 213
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=7.8e-27 Score=256.03 Aligned_cols=168 Identities=28% Similarity=0.352 Sum_probs=145.1
Q ss_pred HcCCccCCeecccCcEEEEEEEEc---CCCcEEEEEEeccc------ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCC
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKI-RHRNILKLYACLLKGG 744 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 744 (851)
+.+|++.+.||+|+||.||+|++. .+++.||||++... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 357999999999999999999984 47889999998543 2345677899999999 6999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeec
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 824 (851)
..|+||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCC
Confidence 999999999999999999764 35788999999999999999999 7799999999999999999999999999
Q ss_pred CccccCCCCCcccccccccccccccCC
Q 003065 825 VAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 825 la~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+++........ ......||+.|+|||
T Consensus 205 ~a~~~~~~~~~-~~~~~~gt~~y~aPE 230 (355)
T 1vzo_A 205 LSKEFVADETE-RAYDFCGTIEYMAPD 230 (355)
T ss_dssp EEEECCGGGGG-GGCGGGSCCTTCCHH
T ss_pred CCeecccCCCC-cccCcccCcCccChh
Confidence 99865433221 223457999999998
No 214
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.93 E-value=1e-26 Score=251.75 Aligned_cols=173 Identities=21% Similarity=0.316 Sum_probs=146.4
Q ss_pred cCCccCCeecccCcEEEEEEEEc-----CCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
++|+..+.||+|+||.||+|++. .+++.||||++.... ....+.+|++++++++||||+++++++..++..|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 47899999999999999999886 356789999986543 3456889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhh-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEee
Q 003065 748 LVLEYMPNGNLFQALHKRVK-----EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 822 (851)
+||||+++|+|.+++..... .....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~D 181 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGD 181 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECC
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEECc
Confidence 99999999999999986432 11245688999999999999999999 77999999999999999999999999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++...............||+.|+|||
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE 210 (322)
T 1p4o_A 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPE 210 (322)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHH
T ss_pred CccccccccccccccccCCCCCCCccChh
Confidence 99998665443322333446789999998
No 215
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.93 E-value=1.4e-26 Score=265.27 Aligned_cols=165 Identities=32% Similarity=0.461 Sum_probs=146.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.+|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+..|+||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 4689999999999999999999999999999998543 35678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---CCCCceEEeeecCcc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAK 827 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~ 827 (851)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+
T Consensus 106 e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 106 EVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp CCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999988753 45889999999999999999999 7899999999999999 467899999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... ....+||+.|+|||
T Consensus 178 ~~~~~~~---~~~~~gt~~y~aPE 198 (484)
T 3nyv_A 178 HFEASKK---MKDKIGTAYYIAPE 198 (484)
T ss_dssp HBCCCCS---HHHHTTGGGTCCHH
T ss_pred Ecccccc---cccCCCCccccCce
Confidence 7765433 23357999999998
No 216
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.93 E-value=3.1e-26 Score=246.35 Aligned_cols=170 Identities=22% Similarity=0.291 Sum_probs=140.1
Q ss_pred HHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 673 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
..+++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34678999999999999999999999899999999986542 2367889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~ 182 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIAS 182 (309)
T ss_dssp EEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--
T ss_pred EEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCc
Confidence 999999999999999864 35889999999999999999999 7799999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... .......||+.|+|||
T Consensus 183 ~~~~~~~-~~~~~~~~~~~y~aPE 205 (309)
T 2h34_A 183 ATTDEKL-TQLGNTVGTLYYMAPE 205 (309)
T ss_dssp ---------------CCGGGCCGG
T ss_pred ccccccc-ccccccCCCcCccCHH
Confidence 6654322 1223457999999998
No 217
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.93 E-value=1.4e-26 Score=248.71 Aligned_cols=165 Identities=32% Similarity=0.486 Sum_probs=135.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
.+|...+.||+|+||.||+|++.. .+|+|+++.. ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 478999999999999999998743 5888877542 23467889999999999999999999875 456899999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+....
T Consensus 112 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 99999999998753 456899999999999999999999 77999999999999999999999999999986554
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
...........||+.|+|||
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE 204 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPE 204 (307)
T ss_dssp ---------CCCCTTSCCHH
T ss_pred ccccccccCCCCCcceECcc
Confidence 32223334457999999998
No 218
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.93 E-value=2.5e-26 Score=255.08 Aligned_cols=164 Identities=24% Similarity=0.358 Sum_probs=137.3
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCC--CCccccEEEEEEeCCeeEEEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIR--HRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 750 (851)
.|++.+.||+|+||.||+|.+.. ++.||||++... ...+.+.+|++++++++ ||||+++++++..++..|+||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 58999999999999999999854 889999998643 23467889999999996 599999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
| +.+++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++ ++.+||+|||+|+...
T Consensus 136 E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 5588999999763 35788889999999999999999 88999999999999996 5799999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
...........+||+.|+|||
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE 226 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPE 226 (390)
T ss_dssp --------CCSCCCGGGCCHH
T ss_pred CCCccccCCCCCcCCCccChH
Confidence 443322233467999999998
No 219
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.6e-26 Score=254.66 Aligned_cols=161 Identities=29% Similarity=0.441 Sum_probs=135.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCC------e
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------S 745 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 745 (851)
.+|+..+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+++++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 4789999999999999999999999999999998543 23466889999999999999999999997653 4
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecC
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 825 (851)
.|+||||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 105 ~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeec
Confidence 59999999 8899999875 24788899999999999999999 78999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+..... ....+||++|+|||
T Consensus 175 a~~~~~~-----~~~~~~t~~y~aPE 195 (367)
T 1cm8_A 175 ARQADSE-----MTGYVVTRWYRAPE 195 (367)
T ss_dssp CEECCSS-----CCSSCSCGGGCCTH
T ss_pred ccccccc-----cCcCcCCCCcCCHH
Confidence 9876432 23357899999998
No 220
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.93 E-value=2.5e-26 Score=247.30 Aligned_cols=173 Identities=23% Similarity=0.369 Sum_probs=138.3
Q ss_pred HHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 673 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
..+.+|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 3456899999999999999999999999999999998642 23567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++++|.+++..... ....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 109 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~ 184 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGR 184 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred EEEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence 99999999999999976533 3456889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
........ .....||+.|+|||
T Consensus 185 ~~~~~~~~--~~~~~~~~~y~aPE 206 (310)
T 2wqm_A 185 FFSSKTTA--AHSLVGTPYYMSPE 206 (310)
T ss_dssp ----------------CCSSCCHH
T ss_pred eecCCCcc--ccccCCCeeEeChH
Confidence 66543221 22356899999998
No 221
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.93 E-value=9.4e-27 Score=261.11 Aligned_cols=166 Identities=30% Similarity=0.389 Sum_probs=135.2
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----------cHHHHHHHHHHHHcCCCCccccEEEEEEeC
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLLKG 743 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 743 (851)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 3468999999999999999999999999999999986431 12247899999999999999999999754
Q ss_pred CeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC---CceEE
Q 003065 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKI 820 (851)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl 820 (851)
+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.+ +.+||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred CceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEE
Confidence 568999999999999887753 346899999999999999999999 7799999999999999754 45999
Q ss_pred eeecCccccCCCCCcccccccccccccccCC
Q 003065 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 821 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+|||+|+....... ....+||+.|+|||
T Consensus 284 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE 311 (419)
T 3i6u_A 284 TDFGHSKILGETSL---MRTLCGTPTYLAPE 311 (419)
T ss_dssp CCSSTTTSCC--------------CTTCCTT
T ss_pred eecccceecCCCcc---ccccCCCCCccCce
Confidence 99999987654322 23467999999999
No 222
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.93 E-value=1e-26 Score=252.43 Aligned_cols=168 Identities=26% Similarity=0.360 Sum_probs=137.3
Q ss_pred HHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 673 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
..+++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34568999999999999999999999999999999986542 23457799999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC-----CCCceEEeee
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-----EDYEPKIADF 823 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~-----~~~~~kl~DF 823 (851)
||||++ |+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ ..+.+||+||
T Consensus 111 v~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999997 5999998763 35889999999999999999999 78999999999999994 4556999999
Q ss_pred cCccccCCCCCcccccccccccccccCC
Q 003065 824 GVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+|+....... ......||+.|+|||
T Consensus 182 g~a~~~~~~~~--~~~~~~~t~~y~aPE 207 (329)
T 3gbz_A 182 GLARAFGIPIR--QFTHEIITLWYRPPE 207 (329)
T ss_dssp THHHHHC-------------CCTTCCHH
T ss_pred CCccccCCccc--ccCCCcCCccccCHH
Confidence 99987654322 223356899999998
No 223
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.5e-26 Score=252.96 Aligned_cols=167 Identities=29% Similarity=0.397 Sum_probs=139.2
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccccc-------HHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG-------VKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
..+|+..+.||+|+||.||+|++..+++.||||++..... .+.+.+|++++++++||||+++++++...+..|
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 4689999999999999999999999999999999864321 235789999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++ +|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 89 lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 99999975 888887642 345777888999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... ......||+.|+|||
T Consensus 161 ~~~~~~~--~~~~~~~t~~y~aPE 182 (346)
T 1ua2_A 161 SFGSPNR--AYTHQVVTRWYRAPE 182 (346)
T ss_dssp TTTSCCC--CCCCSCCCCTTCCHH
T ss_pred eccCCcc--cCCcccccccccCch
Confidence 7654322 223357899999998
No 224
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.93 E-value=6.7e-26 Score=242.36 Aligned_cols=166 Identities=32% Similarity=0.405 Sum_probs=146.5
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----------cHHHHHHHHHHHHcCC-CCccccEEEEEEe
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----------GVKVFAAEMEILGKIR-HRNILKLYACLLK 742 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----------~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 742 (851)
..+|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 458999999999999999999999999999999985432 2356789999999995 9999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEee
Q 003065 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (851)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 822 (851)
++..|+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEec
Confidence 99999999999999999999764 35788999999999999999999 78999999999999999999999999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++....... .....||+.|+|||
T Consensus 168 fg~~~~~~~~~~---~~~~~~~~~y~aPE 193 (298)
T 1phk_A 168 FGFSCQLDPGEK---LREVCGTPSYLAPE 193 (298)
T ss_dssp CTTCEECCTTCC---BCCCCSCGGGCCHH
T ss_pred ccchhhcCCCcc---cccccCCccccCHH
Confidence 999987654432 22357899999998
No 225
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.93 E-value=3e-26 Score=243.67 Aligned_cols=162 Identities=34% Similarity=0.604 Sum_probs=140.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccccc---------HHHHHHHHHHHHcCCCCccccEEEEEEeCCee
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG---------VKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 746 (851)
.+|+..+.||+|+||.||+|++..+++.||||++..... .+.+.+|++++++++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 478999999999999999999999999999999854321 167889999999999999999999986654
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEEeCCCCCCEEECCCCc-----eE
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYE-----PK 819 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDlkp~NILl~~~~~-----~k 819 (851)
++||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+ |+||||||+||+++.++. +|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp EEEEECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred eEEEEecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 7999999999999988653 346899999999999999999999 677 999999999999988776 99
Q ss_pred EeeecCccccCCCCCcccccccccccccccCC
Q 003065 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 820 l~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+|||+|+..... .....||+.|+|||
T Consensus 170 l~Dfg~~~~~~~~-----~~~~~g~~~y~aPE 196 (287)
T 4f0f_A 170 VADFGLSQQSVHS-----VSGLLGNFQWMAPE 196 (287)
T ss_dssp ECCCTTCBCCSSC-----EECCCCCCTTSCGG
T ss_pred eCCCCcccccccc-----ccccCCCccccCch
Confidence 9999999854432 23357999999998
No 226
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.93 E-value=2.6e-26 Score=251.75 Aligned_cols=169 Identities=25% Similarity=0.374 Sum_probs=143.4
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEe--------
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK-------- 742 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 742 (851)
+.+|++.+.||+|+||.||+|++..+++.||||++... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999999999999999988543 234567899999999999999999999876
Q ss_pred CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEee
Q 003065 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (851)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 822 (851)
.+..|+||||++ +++.+.+... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CceEEEEEeccC-CCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEcc
Confidence 456899999996 5888877653 345899999999999999999999 78999999999999999999999999
Q ss_pred ecCccccCCCCC--cccccccccccccccCC
Q 003065 823 FGVAKIAENSPK--VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~--~~~~~~~~gt~~Y~APE 851 (851)
||+|+....... ........||+.|+|||
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 198 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPE 198 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHH
T ss_pred chhcccccccccccccccCCcccccCccCch
Confidence 999987653321 12234467899999998
No 227
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.93 E-value=2.1e-26 Score=251.50 Aligned_cols=164 Identities=24% Similarity=0.360 Sum_probs=136.1
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCC--CccccEEEEEEeCCeeEEEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRH--RNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 750 (851)
+|++.+.||+|+||.||+|.+ .+++.||||++... ...+.+.+|++++++++| |||+++++++..++..|+||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 588999999999999999998 56889999998643 234678899999999976 99999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
|+ .+++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++ ++.+||+|||+|+...
T Consensus 89 e~-~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp CC-CSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred eC-CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 95 588999999763 45888999999999999999999 78999999999999997 5789999999998776
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
...........+||+.|+|||
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE 179 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPE 179 (343)
T ss_dssp -----------CCCCSSCCHH
T ss_pred cccccccCCCCcCCcCcCCHH
Confidence 544333334467999999998
No 228
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.93 E-value=2.3e-26 Score=246.34 Aligned_cols=170 Identities=27% Similarity=0.486 Sum_probs=139.4
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEe-----------
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLK----------- 742 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------- 742 (851)
.++|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 35789999999999999999999999999999998654 345678899999999999999999998765
Q ss_pred --CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEE
Q 003065 743 --GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (851)
Q Consensus 743 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 820 (851)
.+..|+||||+++|+|.+++... ...+++..++.++.|+++|++||| +.+|+||||||+||+++.++.+||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEE
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEE
Confidence 35679999999999999999763 345678888999999999999999 779999999999999999999999
Q ss_pred eeecCccccCCCCC------------cccccccccccccccCC
Q 003065 821 ADFGVAKIAENSPK------------VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 821 ~DFGla~~~~~~~~------------~~~~~~~~gt~~Y~APE 851 (851)
+|||+++....... ........||+.|+|||
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 200 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE 200 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHH
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcc
Confidence 99999986643211 11223457999999998
No 229
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.93 E-value=7.9e-26 Score=240.84 Aligned_cols=163 Identities=29% Similarity=0.358 Sum_probs=141.1
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEe----CCeeEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFL 748 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 748 (851)
.|.+.+.||+|+||.||+|.+..++..||+|++... ...+.+.+|++++++++||||+++++++.. ....|+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 467888999999999999999999999999998643 235678899999999999999999999875 355899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEEeCCCCCCEEEC-CCCceEEeeecC
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLD-EDYEPKIADFGV 825 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGl 825 (851)
||||+++++|.+++... ..+++..+..++.|++.||.||| +.+ |+||||||+||+++ .++.+||+|||+
T Consensus 107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999764 35788999999999999999999 667 99999999999998 789999999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++...... .....||+.|+|||
T Consensus 179 ~~~~~~~~----~~~~~~t~~y~aPE 200 (290)
T 1t4h_A 179 ATLKRASF----AKAVIGTPEFMAPE 200 (290)
T ss_dssp GGGCCTTS----BEESCSSCCCCCGG
T ss_pred cccccccc----cccccCCcCcCCHH
Confidence 97654432 22357999999998
No 230
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.93 E-value=1.5e-26 Score=251.46 Aligned_cols=168 Identities=30% Similarity=0.414 Sum_probs=140.8
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+++|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++...+..|+|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 4568999999999999999999999999999999985442 245577999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||++++++.++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 174 (331)
T 4aaa_A 103 FEFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174 (331)
T ss_dssp EECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceee
Confidence 999999888877553 235889999999999999999999 789999999999999999999999999999866
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....||+.|+|||
T Consensus 175 ~~~~~~--~~~~~~t~~y~aPE 194 (331)
T 4aaa_A 175 AAPGEV--YDDEVATRWYRAPE 194 (331)
T ss_dssp -----------CCCCCTTCCHH
T ss_pred cCCccc--cCCCcCCccccCcc
Confidence 543222 23356899999998
No 231
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.93 E-value=2e-26 Score=249.86 Aligned_cols=168 Identities=23% Similarity=0.344 Sum_probs=135.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEE----EEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTV----AVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v----avK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
.+|+..+.||+|+||.||+|++..+++.| |+|.+... ...+.+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 47899999999999999999998777654 66666432 35678999999999999999999999998765 789
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
|+||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 94 v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 99999999999999864 345889999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..............||+.|+|||
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE 189 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALE 189 (327)
T ss_dssp -------------CCCGGGSCHH
T ss_pred ccCccccccccCCCccccccCHH
Confidence 75544333334456788999998
No 232
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.93 E-value=1.8e-26 Score=244.72 Aligned_cols=167 Identities=26% Similarity=0.308 Sum_probs=130.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCC---CcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+|++.+.||+|+||.||+|++..+ +..||+|++.... ..+.+.+|+.++++++||||+++++++. ++..|+|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 4788999999999999999998653 4569999886542 3456889999999999999999999984 5678999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccccc
Confidence 9999999999999763 345889999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ......+|+.|+|||
T Consensus 167 ~~~~~~-~~~~~~~~~~y~aPE 187 (281)
T 1mp8_A 167 EDSTYY-KASKGKLPIKWMAPE 187 (281)
T ss_dssp -------------CCGGGCCHH
T ss_pred Cccccc-ccccCCCcccccChh
Confidence 543322 122345788999998
No 233
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=6.5e-26 Score=247.01 Aligned_cols=165 Identities=31% Similarity=0.450 Sum_probs=136.9
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcC--CCCccccEEEEEEeC----CeeEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI--RHRNILKLYACLLKG----GSSFL 748 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~~~l 748 (851)
.++|++.+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++... ...|+
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred ccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 457999999999999999999884 8899999985543 34455666666655 899999999999887 78899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC--------CcEEeCCCCCCEEECCCCceEE
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP--------PIIHRDIKSSNILLDEDYEPKI 820 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivHrDlkp~NILl~~~~~~kl 820 (851)
||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 113 v~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred EEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 99999999999999652 5889999999999999999999 66 9999999999999999999999
Q ss_pred eeecCccccCCCCCcc--cccccccccccccCC
Q 003065 821 ADFGVAKIAENSPKVS--DYSCFAGTHGYIAPG 851 (851)
Q Consensus 821 ~DFGla~~~~~~~~~~--~~~~~~gt~~Y~APE 851 (851)
+|||+|+......... ......||+.|+|||
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 216 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHH
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChh
Confidence 9999997665433221 122457999999998
No 234
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=5.9e-26 Score=239.98 Aligned_cols=226 Identities=20% Similarity=0.222 Sum_probs=184.2
Q ss_pred EEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCc
Q 003065 317 AFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNH 396 (851)
Q Consensus 317 ~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~ 396 (851)
.++..+..++ .+|..+. ++|++|++++|++++. .+..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~ 63 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHL------------------------GSYSFFSFPELQVLDLSRCE 63 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEE------------------------CTTTTTTCTTCSEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCccccc------------------------CHhHhccccCCcEEECCCCc
Confidence 3455555555 4565543 4688888888887743 23456777888999999999
Q ss_pred cccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCC-Ccc
Q 003065 397 LSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK-IPS 475 (851)
Q Consensus 397 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~ 475 (851)
+++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+++. +|.
T Consensus 64 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~ 143 (276)
T 2z62_A 64 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCch
Confidence 8877777888889999999999999888888888889999999999999877777888999999999999999864 588
Q ss_pred ccccCCcccEEEecCCcccCCCCCCcccccccc----eeeccCcccccccCCCccccccCCeEeCCCCccccccCccccc
Q 003065 476 ALGALRQLSSLHLEENALTGSIPNEMGDCARIV----DLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMK 551 (851)
Q Consensus 476 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 551 (851)
.+..+++|+.|+|++|++++..+..+..+.+|+ .|++++|.+++..+..+.. .+|+.|+|++|++++..+..+..
T Consensus 144 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTT
T ss_pred hhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcc
Confidence 899999999999999999888888888888877 8999999999766655554 48999999999999655556677
Q ss_pred c-cceEEeCcCCcccccCCc
Q 003065 552 L-KLSSIDLSENQLSGSVPL 570 (851)
Q Consensus 552 l-~L~~l~ls~N~l~~~~p~ 570 (851)
+ .|+.|++++|+|.|.+|.
T Consensus 223 l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCSCCEEECCSSCBCCCTTT
T ss_pred cccccEEEccCCcccccCCc
Confidence 7 899999999999999983
No 235
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.93 E-value=5.9e-26 Score=243.48 Aligned_cols=165 Identities=31% Similarity=0.441 Sum_probs=146.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
..|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|+.++++++||||+++++++...+..|+||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4689999999999999999999999999999998643 3467889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 832 (851)
+++++|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 102 LGGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred CCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999998853 35889999999999999999999 779999999999999999999999999999876543
Q ss_pred CCcccccccccccccccCC
Q 003065 833 PKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 833 ~~~~~~~~~~gt~~Y~APE 851 (851)
.. ......||+.|+|||
T Consensus 173 ~~--~~~~~~~~~~y~aPE 189 (303)
T 3a7i_A 173 QI--KRNTFVGTPFWMAPE 189 (303)
T ss_dssp BC--CBCCCCSCGGGCCHH
T ss_pred cc--ccCccCCCcCccCHH
Confidence 22 123457999999998
No 236
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.93 E-value=4.4e-26 Score=247.35 Aligned_cols=169 Identities=30% Similarity=0.343 Sum_probs=144.6
Q ss_pred cCCccCCeecccCcEEEEEEE----EcCCCcEEEEEEecccc--cHHHHHHHHHHHHcCCCCccccEEEEEE--eCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLL--KGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 747 (851)
.+|+..+.||+|+||.||+|+ ...+++.||||++.... ..+.+.+|++++++++||||+++++++. .....|
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 478899999999999999999 45678899999986553 3456899999999999999999999886 456689
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 103 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccce
Confidence 9999999999999998642 25889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcc-cccccccccccccCC
Q 003065 828 IAENSPKVS-DYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~-~~~~~~gt~~Y~APE 851 (851)
......... ......||+.|+|||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE 200 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPE 200 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHH
T ss_pred ecccCCccceeeccCCccccccCHH
Confidence 775443221 223346899999998
No 237
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=3.3e-26 Score=253.95 Aligned_cols=166 Identities=23% Similarity=0.341 Sum_probs=139.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeC------------
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG------------ 743 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------------ 743 (851)
.+|+..+.||+|+||.||+|++..+++.||||++.... ....+|+++++.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP--RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 47899999999999999999999999999999986542 2234799999999999999999998543
Q ss_pred --------------------------CeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 003065 744 --------------------------GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS 797 (851)
Q Consensus 744 --------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 797 (851)
...++||||++ |+|.+.+..... ....+++..+..++.|+++||+||| +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH---~ 159 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIH---S 159 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence 34789999997 689888876433 3456899999999999999999999 8
Q ss_pred CCcEEeCCCCCCEEEC-CCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 798 PPIIHRDIKSSNILLD-EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 798 ~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.+|+||||||+||+++ .++.+||+|||+|+........ ....||+.|+|||
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE 211 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---VAYICSRFYRAPE 211 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---CCCCCCSSCCCHH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---cCcccCCCccCHH
Confidence 8999999999999998 6889999999999876544322 2357899999998
No 238
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.93 E-value=5.5e-26 Score=243.82 Aligned_cols=164 Identities=27% Similarity=0.431 Sum_probs=143.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEecc
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
++|.+.+.||+|+||.||+|++..+++.||+|++.... ..+.+.+|++++++++||||+++++++...+..|+||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 47899999999999999999999999999999986542 3456889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---CCCCceEEeeecCccccC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~ 830 (851)
++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 89 ~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 89 SGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 999999998764 35788999999999999999999 7899999999999999 778899999999997654
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
... .....||+.|+|||
T Consensus 161 ~~~----~~~~~~~~~y~aPE 177 (304)
T 2jam_A 161 NGI----MSTACGTPGYVAPE 177 (304)
T ss_dssp CBT----THHHHSCCCBCCTT
T ss_pred CCc----cccccCCCCccChH
Confidence 321 22346999999999
No 239
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=240.32 Aligned_cols=168 Identities=26% Similarity=0.372 Sum_probs=142.6
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
+|.....||+|+||.||+|++..+++.||||++... ...+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 456667999999999999999999999999998654 335678899999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC-CCceEEeeecCccccCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIAENSP 833 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~ 833 (851)
+++|.+++... ......++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 103 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 103 GGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp EEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999764 22345678888899999999999999 789999999999999987 8999999999998765432
Q ss_pred CcccccccccccccccCC
Q 003065 834 KVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 834 ~~~~~~~~~gt~~Y~APE 851 (851)
.. .....||+.|+|||
T Consensus 178 ~~--~~~~~~~~~y~aPE 193 (295)
T 2clq_A 178 PC--TETFTGTLQYMAPE 193 (295)
T ss_dssp -----CCCCCCGGGCCHH
T ss_pred Cc--ccccCCCccccChh
Confidence 21 22357999999998
No 240
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.93 E-value=2e-26 Score=253.59 Aligned_cols=164 Identities=28% Similarity=0.426 Sum_probs=143.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
.+|+..+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++..++..|+||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 4789999999999999999999999999999998654 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
+++++|.+++... ..+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+++....
T Consensus 113 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 113 MDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred CCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999764 25788899999999999999999 54 899999999999999999999999999976533
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
.. .....||+.|+|||
T Consensus 185 ~~----~~~~~gt~~y~aPE 200 (360)
T 3eqc_A 185 SM----ANSFVGTRSYMSPE 200 (360)
T ss_dssp HC--------CCCCTTCCHH
T ss_pred cc----ccCCCCCCCeECHH
Confidence 21 22357999999998
No 241
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.93 E-value=1.5e-26 Score=247.95 Aligned_cols=169 Identities=26% Similarity=0.402 Sum_probs=142.8
Q ss_pred HHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 674 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
..++|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|+++++.++||||+++++++..++..|+|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 345899999999999999999999989999999998543 456788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++++|.+++... ...+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp CCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred eCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999998764 345889999999999999999999 77999999999999999999999999999764322
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
.. .......||+.|+|||
T Consensus 170 ~~--~~~~~~~~~~~y~aPE 187 (302)
T 2j7t_A 170 TL--QKRDSFIGTPYWMAPE 187 (302)
T ss_dssp HH--HC-----CCGGGCCHH
T ss_pred cc--cccccccCChhhcCCe
Confidence 11 1112356899999998
No 242
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.93 E-value=4.3e-26 Score=243.99 Aligned_cols=168 Identities=26% Similarity=0.380 Sum_probs=144.3
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
+++|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 468999999999999999999999899999999986442 2356889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||++ ++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++...
T Consensus 82 e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 82 EFLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp ECCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred Eccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 9997 6999998764 2345788899999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
.... ......||+.|+|||
T Consensus 155 ~~~~--~~~~~~~~~~y~aPE 173 (299)
T 2r3i_A 155 VPVR--TYTHEVVTLWYRAPE 173 (299)
T ss_dssp CCSB--CTTSCBCCCTTCCHH
T ss_pred CCcc--ccCcccccccccCcH
Confidence 4322 122346899999998
No 243
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.93 E-value=3.5e-26 Score=240.36 Aligned_cols=167 Identities=26% Similarity=0.369 Sum_probs=144.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++. +++.||+|++... ...+.+.+|++++++++||||+++++++..++..|+||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 46889999999999999999985 6778999998765 356788999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~- 158 (267)
T 3t9t_A 87 HGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ- 158 (267)
T ss_dssp TCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-
T ss_pred CCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-
Confidence 99999999763 345789999999999999999999 7899999999999999999999999999998664321
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
........||+.|+|||
T Consensus 159 ~~~~~~~~~~~~y~aPE 175 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPE 175 (267)
T ss_dssp HHSTTSTTCCGGGCCHH
T ss_pred ccccccccccccccChh
Confidence 11122345788999998
No 244
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.93 E-value=2.1e-26 Score=247.37 Aligned_cols=165 Identities=33% Similarity=0.506 Sum_probs=135.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccCC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 755 (851)
++|++.+.||+|+||.||+|++ .++.||||++......+.+.+|++++++++||||+++++++. +..|+||||+++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~ 83 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEG 83 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTT
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCC
Confidence 4788999999999999999988 467899999987777788999999999999999999999876 347999999999
Q ss_pred CCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc-eEEeeecCccccCCCCC
Q 003065 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-PKIADFGVAKIAENSPK 834 (851)
Q Consensus 756 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGla~~~~~~~~ 834 (851)
|+|.+++... .....+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||+++......
T Consensus 84 ~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~- 160 (307)
T 2eva_A 84 GSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM- 160 (307)
T ss_dssp CBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-
Confidence 9999999753 12234788889999999999999999432279999999999999998886 7999999997654322
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
....||+.|+|||
T Consensus 161 ----~~~~gt~~y~aPE 173 (307)
T 2eva_A 161 ----TNNKGSAAWMAPE 173 (307)
T ss_dssp --------CCTTSSCHH
T ss_pred ----ccCCCCCceEChh
Confidence 2246899999998
No 245
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.93 E-value=8.3e-26 Score=245.47 Aligned_cols=161 Identities=24% Similarity=0.322 Sum_probs=141.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCC-CCccccEEEEEEe--CCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLK--GGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~e~ 752 (851)
++|++.+.||+|+||.||+|++..+++.||||++.. ...+.+.+|++++++++ ||||+++++++.. ....++||||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 579999999999999999999999999999999864 44677899999999997 9999999999987 6678999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC-ceEEeeecCccccCC
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAEN 831 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~ 831 (851)
+++++|.+++. .++...+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+|+....
T Consensus 115 ~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 115 VNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp CCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 99999988764 2678889999999999999999 78999999999999999776 899999999987654
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
... .....||+.|+|||
T Consensus 184 ~~~---~~~~~~~~~y~aPE 200 (330)
T 3nsz_A 184 GQE---YNVRVASRYFKGPE 200 (330)
T ss_dssp TCC---CCSCCSCGGGCCHH
T ss_pred CCc---cccccccccccChh
Confidence 432 23357899999998
No 246
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.93 E-value=1.9e-26 Score=261.55 Aligned_cols=167 Identities=26% Similarity=0.429 Sum_probs=141.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
.+|+..+.||+|+||.||+|++. .+..||||++... ...+.+.+|++++++++||||+++++++. .+..|+||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 36788999999999999999984 5678999998754 45788999999999999999999999986 567899999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+|+|.++++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 266 ~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 266 KGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp TCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred CCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 999999997542 124678889999999999999999 78999999999999999999999999999987654321
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
.......+|+.|+|||
T Consensus 340 -~~~~~~~~~~~y~aPE 355 (454)
T 1qcf_A 340 -TAREGAKFPIKWTAPE 355 (454)
T ss_dssp -HTTCSSSSCGGGSCHH
T ss_pred -eccCCCcccccccCHH
Confidence 1122335688999998
No 247
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.93 E-value=8.1e-27 Score=258.27 Aligned_cols=166 Identities=15% Similarity=0.187 Sum_probs=135.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHH---HHHcCCCCccccEE-------EEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEME---ILGKIRHRNILKLY-------ACL 740 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~---~l~~l~h~niv~l~-------~~~ 740 (851)
++|+..+.||+|+||.||+|++..+++.||||++... ...+.+.+|++ .+++++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 4688899999999999999999889999999998532 34577889994 55556899999988 776
Q ss_pred EeCCe-----------------eEEEEeccCCCCHHHHHHHhhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 003065 741 LKGGS-----------------SFLVLEYMPNGNLFQALHKRVKEGK--PELDWFRRYKIALGAAKGIAYLHHDCSPPII 801 (851)
Q Consensus 741 ~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 801 (851)
...+. .|+||||+ +|+|.+++........ ..+++..++.++.|++.||+||| +.+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv 228 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 228 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 65542 78999999 6899999987533221 23446778889999999999999 78999
Q ss_pred EeCCCCCCEEECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 802 HRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 802 HrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||||||+|||++.++.+||+|||+|+.... ......| +.|+|||
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE 272 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPE 272 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChh
Confidence 999999999999999999999999986432 1233568 9999998
No 248
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.93 E-value=3.7e-26 Score=246.78 Aligned_cols=172 Identities=23% Similarity=0.308 Sum_probs=143.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCCccccEEEEEEe----CCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv 749 (851)
++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++.. ....|+|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4789999999999999999999999999999988544 345678899999999999999999998862 3478999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++..... ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 999999999999987532 3456899999999999999999999 779999999999999999999999999998765
Q ss_pred CCCCCc-------ccccccccccccccCC
Q 003065 830 ENSPKV-------SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~-------~~~~~~~gt~~Y~APE 851 (851)
...... .......||+.|+|||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 213 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPE 213 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGG
T ss_pred ccccccccccccccccccccCCcccCCHh
Confidence 422111 0112345799999998
No 249
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.93 E-value=3.5e-26 Score=243.47 Aligned_cols=168 Identities=23% Similarity=0.316 Sum_probs=132.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccccc----HHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
++|+..+.||+|+||.||+|++..+++.||||++..... .+.+.++...++.++||||+++++++..++..|+|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 478999999999999999999999999999999865422 2234445555788899999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
|++ |+|.+++..... ....+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 87 ~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 87 LMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp CCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred hhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 996 599888876433 3456899999999999999999999 66 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....||+.|+|||
T Consensus 162 ~~~~~---~~~~~t~~y~aPE 179 (290)
T 3fme_A 162 DDVAK---DIDAGCKPYMAPE 179 (290)
T ss_dssp -----------CCCCCCSCHH
T ss_pred ccccc---cccCCCccccChh
Confidence 44322 2246999999998
No 250
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=6.4e-25 Score=231.11 Aligned_cols=205 Identities=21% Similarity=0.288 Sum_probs=180.0
Q ss_pred ccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEec
Q 003065 338 ALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFG 417 (851)
Q Consensus 338 ~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 417 (851)
+.+.+++++|.++ .+|. .+. +++++|+|++|++++..+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~------------------------~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 69 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPS------------------------NIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLN 69 (270)
T ss_dssp TTTEEECTTSCCS-SCCS------------------------CCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCC------------------------CCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECC
Confidence 4667888888877 2332 222 468999999999997777789999999999999
Q ss_pred CCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCC
Q 003065 418 DNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSI 497 (851)
Q Consensus 418 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 497 (851)
+|+++...+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|++++..
T Consensus 70 ~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 70 DNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 99999888888899999999999999999777788899999999999999999888888999999999999999999877
Q ss_pred CCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCC
Q 003065 498 PNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVP 569 (851)
Q Consensus 498 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p 569 (851)
+..|+.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+ .|+.|++++|+|.|.++
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7779999999999999999998877889999999999999999996555567777 89999999999999987
No 251
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.93 E-value=2e-26 Score=248.71 Aligned_cols=173 Identities=31% Similarity=0.392 Sum_probs=144.4
Q ss_pred cCCccCCeecccCcEEEEEEEE-----cCCCcEEEEEEecccc---cHHHHHHHHHHHHcC-CCCccccEEEEEEeCC-e
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG-S 745 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-~ 745 (851)
++|++.+.||+|+||.||+|++ ..+++.||||++.... ..+.+.+|+++++++ +||||+++++++...+ .
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 106 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 106 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence 4789999999999999999985 3466789999987653 345688999999999 7999999999987654 5
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEG-----------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~ 814 (851)
.|+||||+++|+|.+++....... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 183 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECC
Confidence 899999999999999998642210 122788999999999999999999 789999999999999999
Q ss_pred CCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 815 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++.+||+|||+++...............||+.|+|||
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE 220 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHH
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCch
Confidence 9999999999998765544333334456899999998
No 252
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.93 E-value=9.8e-27 Score=249.44 Aligned_cols=167 Identities=33% Similarity=0.445 Sum_probs=128.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHc--CCCCccccEEEEEEeCC----eeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKGG----SSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~lv 749 (851)
++|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++...+ ..|+|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T-THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc-chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 4789999999999999999987 4889999998544 45567788888887 79999999999998776 78999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCcEEeCCCCCCEEECCCCceEEeeec
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPKIADFG 824 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFG 824 (851)
|||+++|+|.+++.+. .+++..+..++.|++.|++|||... +++|+||||||+||+++.++.+||+|||
T Consensus 80 ~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecC
Confidence 9999999999999653 4666778899999999999999321 4699999999999999999999999999
Q ss_pred CccccCCCCCcc--cccccccccccccCC
Q 003065 825 VAKIAENSPKVS--DYSCFAGTHGYIAPG 851 (851)
Q Consensus 825 la~~~~~~~~~~--~~~~~~gt~~Y~APE 851 (851)
+|+......... ......||+.|+|||
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 182 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPE 182 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHH
T ss_pred cceeccCCCcccccccCCCCcCccccCHh
Confidence 997665443321 122347999999998
No 253
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.93 E-value=3e-26 Score=248.62 Aligned_cols=173 Identities=27% Similarity=0.335 Sum_probs=139.3
Q ss_pred cCCccCCeecccCcEEEEEEE-----EcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
.+|++.+.||+|+||.||+|+ ...++..||||++... ....++.+|+.++++++||||+++++++...+..|
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 579999999999999999998 4467788999998643 33457889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---CCceEEee
Q 003065 748 LVLEYMPNGNLFQALHKRVKE--GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIAD 822 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~D 822 (851)
+||||+++++|.+++...... ....+++..++.++.|++.||.||| +.+|+||||||+||+++. +..+||+|
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~D 186 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 186 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECc
Confidence 999999999999999875321 1245889999999999999999999 789999999999999984 44699999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++...............||+.|+|||
T Consensus 187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE 215 (327)
T 2yfx_A 187 FGMARDIYRASYYRKGGCAMLPVKWMPPE 215 (327)
T ss_dssp CHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred cccccccccccccccCCCcCCCcceeCHh
Confidence 99998665443333333456899999998
No 254
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.93 E-value=2e-26 Score=247.09 Aligned_cols=173 Identities=28% Similarity=0.420 Sum_probs=129.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEec
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
.+|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 4799999999999999999999889999999988543 3356688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhhhC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 753 MPNGNLFQALHKRVKE---GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
+++++|.+++...... ....+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 9999999999764322 2345899999999999999999999 779999999999999999999999999999766
Q ss_pred CCCCCc---ccccccccccccccCC
Q 003065 830 ENSPKV---SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~---~~~~~~~gt~~Y~APE 851 (851)
...... .......||+.|+|||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE 196 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPE 196 (303)
T ss_dssp C---------------CCCTTCCHH
T ss_pred ccCCCccchhhhcccCCCccccCHH
Confidence 543211 1123457999999998
No 255
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.93 E-value=2.4e-26 Score=243.36 Aligned_cols=171 Identities=25% Similarity=0.453 Sum_probs=144.2
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEe--CCeeEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFL 748 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 748 (851)
.++|++.+.||+|+||.||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.. ++..|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 45789999999999999999999999999999998643 235668899999999999999999998754 578899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----cEEeCCCCCCEEECCCCceEEeee
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP-----IIHRDIKSSNILLDEDYEPKIADF 823 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivHrDlkp~NILl~~~~~~kl~DF 823 (851)
||||+++++|.+++..... ....+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999987533 3445899999999999999999999 556 999999999999999999999999
Q ss_pred cCccccCCCCCcccccccccccccccCC
Q 003065 824 GVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|.++........ .....||+.|+|||
T Consensus 161 g~~~~~~~~~~~--~~~~~~~~~y~aPE 186 (279)
T 2w5a_A 161 GLARILNHDTSF--AKTFVGTPYYMSPE 186 (279)
T ss_dssp CHHHHC---CHH--HHHHHSCCTTCCHH
T ss_pred chheeecccccc--ccccCCCccccChH
Confidence 999876543221 22356899999998
No 256
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.93 E-value=5.9e-26 Score=244.72 Aligned_cols=173 Identities=23% Similarity=0.327 Sum_probs=133.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcC---CCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCC----
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG---- 744 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 744 (851)
.+|.+.+.||+|+||.||+|++.. ++..||||++... ...+.+.+|++++++++||||+++++++...+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 468899999999999999998865 4558999998643 23466889999999999999999999987654
Q ss_pred -eeEEEEeccCCCCHHHHHHHhhh-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEee
Q 003065 745 -SSFLVLEYMPNGNLFQALHKRVK-EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (851)
Q Consensus 745 -~~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 822 (851)
..|+||||+++|+|.+++..... .....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||+|
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEECS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEee
Confidence 34999999999999999965432 23456899999999999999999999 78999999999999999999999999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++...............|++.|+|||
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE 219 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIE 219 (313)
T ss_dssp CSCC----------------CCGGGSCHH
T ss_pred cCcceecccccccCcccccCCCccccCch
Confidence 99998765443222233346788999998
No 257
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.93 E-value=5.6e-26 Score=246.48 Aligned_cols=171 Identities=32% Similarity=0.481 Sum_probs=142.4
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEE--EEEEeccc---ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTV--AVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v--avK~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 748 (851)
.++|+..+.||+|+||.||+|++..++..+ |||.+... ...+.+.+|+++++++ +||||+++++++...+..|+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 357999999999999999999998888765 99988643 3445688999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhh-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc
Q 003065 749 VLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~ 817 (851)
||||+++|+|.+++..... .....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 9999999999999976420 12346899999999999999999999 789999999999999999999
Q ss_pred eEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 818 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+||+|||+++....... .....+|+.|+|||
T Consensus 181 ~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE 211 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVK---KTMGRLPVRWMAIE 211 (327)
T ss_dssp EEECCTTCEESSCEECC---C----CCTTTCCHH
T ss_pred EEEcccCcCcccccccc---ccCCCCCccccChh
Confidence 99999999974432211 12245788999998
No 258
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.93 E-value=7.6e-26 Score=245.30 Aligned_cols=168 Identities=30% Similarity=0.432 Sum_probs=140.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcC-CCCccccEEEEEEe------CCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKI-RHRNILKLYACLLK------GGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~~~~ 747 (851)
.+|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|+++++++ +||||+++++++.. .+..|
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 5789999999999999999999999999999998654 4457788999999999 89999999999976 46789
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++|+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 104 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp EEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred EEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 9999999999999998642 245788899999999999999999 7799999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... ......||+.|+|||
T Consensus 178 ~~~~~~~--~~~~~~~~~~y~aPE 199 (326)
T 2x7f_A 178 QLDRTVG--RRNTFIGTPYWMAPE 199 (326)
T ss_dssp ---------------CCGGGCCHH
T ss_pred ecCcCcc--ccccccCCccccChh
Confidence 7654321 123357999999998
No 259
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=6e-26 Score=246.77 Aligned_cols=169 Identities=30% Similarity=0.470 Sum_probs=135.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCC----cEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNA----GTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
.+|+..+.||+|+||.||+|++..++ ..||||++.... ....+.+|++++++++||||+++++++...+..|+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 36778899999999999999986543 359999986542 34568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 124 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999763 346889999999999999999999 77999999999999999999999999999987
Q ss_pred cCCCCCcc-cccccccccccccCC
Q 003065 829 AENSPKVS-DYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~-~~~~~~gt~~Y~APE 851 (851)
........ ......+|+.|+|||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE 220 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPE 220 (333)
T ss_dssp --------------CCCGGGSCHH
T ss_pred hccccccccccCCCCccccccCch
Confidence 65432211 122335688999998
No 260
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.93 E-value=3.1e-26 Score=243.92 Aligned_cols=165 Identities=33% Similarity=0.509 Sum_probs=128.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
.+|++.+.||+|+||.||+|++. ..||||++... ...+.+.+|++++++++||||++++++. ..+..++|||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 37899999999999999999863 35999988643 2346788999999999999999999965 5566899999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999988642 346889999999999999999999 78999999999999999999999999999986654
Q ss_pred CCCcccccccccccccccCC
Q 003065 832 SPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~~~~~~~gt~~Y~APE 851 (851)
...........||+.|+|||
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE 192 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPE 192 (289)
T ss_dssp -----------CCCTTCCHH
T ss_pred ccccccccccCCCccccCch
Confidence 33333334467999999998
No 261
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.93 E-value=4.2e-26 Score=251.31 Aligned_cols=168 Identities=19% Similarity=0.277 Sum_probs=135.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCC-----CcEEEEEEeccccc-------------HHHHHHHHHHHHcCCCCccccEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKGDG-------------VKVFAAEMEILGKIRHRNILKLY 737 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-------------~~~~~~E~~~l~~l~h~niv~l~ 737 (851)
.+|++.+.||+|+||.||+|.+..+ ++.||||++..... ...+.+|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 4789999999999999999998664 47899999865431 11234456667778899999999
Q ss_pred EEEEeC----CeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC
Q 003065 738 ACLLKG----GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (851)
Q Consensus 738 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~ 813 (851)
+++... ...|+||||+ +++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEE
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEe
Confidence 998764 4579999999 99999999763 346899999999999999999999 77999999999999998
Q ss_pred --CCCceEEeeecCccccCCCCCc-----ccccccccccccccCC
Q 003065 814 --EDYEPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 814 --~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~APE 851 (851)
.++.+||+|||+|+........ .......||+.|+|||
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 231 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSID 231 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHH
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHH
Confidence 8899999999999876433211 1123456999999998
No 262
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=7.3e-26 Score=242.03 Aligned_cols=168 Identities=27% Similarity=0.382 Sum_probs=140.6
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCc---EEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCee-EEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS-FLV 749 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 749 (851)
.|...+.||+|+||.||+|++..++. .||+|++.... ..+.+.+|++++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 46677899999999999999765544 79999986543 346788999999999999999999999776555 999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+.+|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp ECCCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EecccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999998752 346788999999999999999999 779999999999999999999999999999865
Q ss_pred CCCCC--cccccccccccccccCC
Q 003065 830 ENSPK--VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~--~~~~~~~~gt~~Y~APE 851 (851)
..... ........||+.|+|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE 198 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALE 198 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHH
T ss_pred cCCcccccccCcCCCCCccccChh
Confidence 44321 11223356899999998
No 263
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.93 E-value=8.4e-26 Score=248.90 Aligned_cols=166 Identities=27% Similarity=0.392 Sum_probs=142.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeC-----CeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 747 (851)
.+|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++... ...|
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 37999999999999999999999999999999986542 346788999999999999999999998754 3689
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 107 iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 9999996 6999988652 4889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcc-cccccccccccccCC
Q 003065 828 IAENSPKVS-DYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~-~~~~~~gt~~Y~APE 851 (851)
......... ......||+.|+|||
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE 201 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPE 201 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHH
T ss_pred ecCCCCCccccccccccccCCCCCH
Confidence 765432211 123457999999998
No 264
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.93 E-value=5.1e-26 Score=255.22 Aligned_cols=165 Identities=29% Similarity=0.443 Sum_probs=136.4
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeC----C--eeEEEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG----G--SSFLVL 750 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~--~~~lv~ 750 (851)
+|+..+.||+|+||.||+|++..+++.||||++.... ....+|++++++++|||||++++++... + ..++||
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 5888999999999999999999999999999986542 2234799999999999999999988542 2 367999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC-CceEEeeecCcccc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKIA 829 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~ 829 (851)
||+++ ++.+.+..... ....+++..+..++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+..
T Consensus 133 e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp ECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 99964 77777665322 3456899999999999999999999 8899999999999999965 57899999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ...+||+.|+|||
T Consensus 208 ~~~~~~---~~~~~t~~y~aPE 226 (420)
T 1j1b_A 208 VRGEPN---VSYICSRYYRAPE 226 (420)
T ss_dssp CTTCCC---CSCCSCTTSCCHH
T ss_pred ccCCCc---eeeeeCCCcCCHH
Confidence 544322 2357899999998
No 265
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=2.2e-26 Score=266.54 Aligned_cols=156 Identities=17% Similarity=0.115 Sum_probs=124.0
Q ss_pred eecccCcEEEEEEEEcCCCcEEEEEEeccc------------ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEE
Q 003065 683 LIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------------DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 683 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~------------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 749 (851)
..+.|+.|.+..++....|+.||||++.+. ...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 356677777777777778899999998543 2345689999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||++|++|.+++.+. ..++.. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999763 234543 58999999999999 789999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ...+.+||++|||||
T Consensus 390 ~~~~~--~~~t~vGTp~YmAPE 409 (569)
T 4azs_A 390 PQDCS--WPTNLVQSFFVFVNE 409 (569)
T ss_dssp C---C--CSHHHHHHHHHHHHH
T ss_pred CCCCc--cccCceechhhccHH
Confidence 55432 234568999999998
No 266
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.93 E-value=6.3e-26 Score=250.48 Aligned_cols=163 Identities=33% Similarity=0.398 Sum_probs=132.1
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCC------
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------ 744 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 744 (851)
.++|+..+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35899999999999999999999999999999998653 23456889999999999999999999997654
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeec
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 824 (851)
..|+||||++ ++|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEee
Confidence 7899999996 578887752 3788899999999999999999 7899999999999999999999999999
Q ss_pred CccccCCCCCcccccccccccccccCC
Q 003065 825 VAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 825 la~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+|+....... .....||+.|+|||
T Consensus 173 ~a~~~~~~~~---~~~~~gt~~y~aPE 196 (371)
T 2xrw_A 173 LARTAGTSFM---MTPYVVTRYYRAPE 196 (371)
T ss_dssp C-------------------CTTCCHH
T ss_pred cccccccccc---cCCceecCCccCHH
Confidence 9987654321 23357999999998
No 267
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=245.04 Aligned_cols=165 Identities=33% Similarity=0.485 Sum_probs=133.0
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHH--HHcCCCCccccEEEEEEe-----CCeeE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEI--LGKIRHRNILKLYACLLK-----GGSSF 747 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~~ 747 (851)
+++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|.++ +..++||||+++++++.. ....|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 45899999999999999999977 67899999986443 3444455555 445899999999986542 23568
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC---------CcEEeCCCCCCEEECCCCce
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP---------PIIHRDIKSSNILLDEDYEP 818 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivHrDlkp~NILl~~~~~~ 818 (851)
+||||+++|+|.+++... ..++..+..++.|+++||+||| +. +|+||||||+|||++.++.+
T Consensus 89 lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcE
Confidence 999999999999999753 3478889999999999999999 66 99999999999999999999
Q ss_pred EEeeecCccccCCCCC------cccccccccccccccCC
Q 003065 819 KIADFGVAKIAENSPK------VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 819 kl~DFGla~~~~~~~~------~~~~~~~~gt~~Y~APE 851 (851)
||+|||+|+....... ........||+.|+|||
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 198 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHH
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCch
Confidence 9999999987654321 11223457999999998
No 268
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=4.2e-25 Score=234.63 Aligned_cols=207 Identities=23% Similarity=0.250 Sum_probs=181.4
Q ss_pred cCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccc
Q 003065 333 LGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVG 412 (851)
Q Consensus 333 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 412 (851)
+..+++++++++++|.++ .+| ..+. +++++|+|++|++++..|..|..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip------------------------~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~ 58 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALP------------------------PDLP--KDTTILHLSENLLYTFSLATLMPYTRLT 58 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCC------------------------SCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCC------------------------CCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCC
Confidence 556778888898888887 333 2222 5688999999999988888899999999
Q ss_pred eEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCc
Q 003065 413 MLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (851)
Q Consensus 413 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (851)
+|+|++|++++..+. ..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 59 ~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 59 QLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 999999999876543 67899999999999998 788889999999999999999998888999999999999999999
Q ss_pred ccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCc
Q 003065 493 LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPL 570 (851)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~ 570 (851)
+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+... .|+.+++++|+|.|.+..
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCcc
Confidence 99888888899999999999999999777777899999999999999999 788888777 899999999999998854
No 269
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.93 E-value=1.5e-25 Score=252.04 Aligned_cols=164 Identities=24% Similarity=0.285 Sum_probs=142.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-cHHHHHHHHHHHHcC------CCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKI------RHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~~l 748 (851)
.+|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+++++.+ +|+||+++++++...+..|+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 46999999999999999999999999999999997653 345677899888877 57799999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc--eEEeeecCc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--PKIADFGVA 826 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla 826 (851)
||||++ ++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+|
T Consensus 177 v~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999995 6999998864 2345899999999999999999999 679999999999999999887 999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+...... ...+||+.|+|||
T Consensus 250 ~~~~~~~-----~~~~gt~~y~aPE 269 (429)
T 3kvw_A 250 CYEHQRV-----YTYIQSRFYRAPE 269 (429)
T ss_dssp EETTCCC-----CSSCSCGGGCCHH
T ss_pred eecCCcc-----cccCCCCCccChH
Confidence 7654332 2357999999998
No 270
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.93 E-value=4.4e-26 Score=246.72 Aligned_cols=165 Identities=31% Similarity=0.403 Sum_probs=139.8
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----------cHHHHHHHHHHHHcCCCCccccEEEEEEeCC
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 744 (851)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357999999999999999999999999999999985431 2235789999999999999999999987655
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc---eEEe
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIA 821 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~ 821 (851)
.|+||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp -EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred -eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEc
Confidence 8999999999999998854 346889999999999999999999 789999999999999987654 9999
Q ss_pred eecCccccCCCCCcccccccccccccccCC
Q 003065 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 822 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|||+++....... .....||+.|+|||
T Consensus 160 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE 186 (322)
T 2ycf_A 160 DFGHSKILGETSL---MRTLCGTPTYLAPE 186 (322)
T ss_dssp CCTTCEECCCCHH---HHHHHSCCTTCCHH
T ss_pred cCccceecccccc---cccccCCcCccCch
Confidence 9999987654321 22356899999998
No 271
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.93 E-value=6.2e-26 Score=242.69 Aligned_cols=169 Identities=30% Similarity=0.381 Sum_probs=138.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCC---cEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEE-EeCCeeEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNA---GTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACL-LKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 748 (851)
..|+..+.||+|+||.||+|++..++ ..||+|.+.... ..+.+.+|++++++++||||+++++++ ..++..|+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 36888999999999999999975433 358999886543 346688999999999999999999985 45667899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 105 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEECCTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEeCCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999753 345788999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCC--cccccccccccccccCC
Q 003065 829 AENSPK--VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~--~~~~~~~~gt~~Y~APE 851 (851)
...... ........||+.|+|||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE 202 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALE 202 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHH
T ss_pred ccccchhccccccCCCCCccccChH
Confidence 654321 11223456889999998
No 272
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.93 E-value=7e-26 Score=238.48 Aligned_cols=161 Identities=22% Similarity=0.319 Sum_probs=140.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeC--CeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 749 (851)
++|+..+.||+|+||.||+|++ .++.||||++... ...+.+.+|++++++++||||+++++++... +..++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 5789999999999999999998 4788999998654 2346788999999999999999999999876 778999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
|||+++|+|.+++... ....+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+|||++.
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred ecccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEecccee
Confidence 9999999999999753 2335899999999999999999999 667 9999999999999999999999999876
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ...||+.|+|||
T Consensus 162 ~~~~~-------~~~~t~~y~aPE 178 (271)
T 3kmu_A 162 SFQSP-------GRMYAPAWVAPE 178 (271)
T ss_dssp TTSCT-------TCBSCGGGSCHH
T ss_pred eeccc-------CccCCccccChh
Confidence 43322 246899999998
No 273
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.93 E-value=4.3e-26 Score=248.82 Aligned_cols=168 Identities=25% Similarity=0.365 Sum_probs=142.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHH-HHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEI-LGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
.+|+..+.||+|+||.||+|++..+++.||||++... ....++..|..+ ++.++||||+++++++..++..|+|||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 4688899999999999999999999999999998654 233455566665 777899999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
|+++ +|.+++..... ....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 131 ~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 131 LMDT-SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCSE-EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HhhC-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 9975 99999876432 3456899999999999999999999 55 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
... ......||+.|+|||
T Consensus 206 ~~~---~~~~~~gt~~y~aPE 223 (340)
T 3an0_A 206 DSV---AKTIDAGCKPYMAPE 223 (340)
T ss_dssp CHH---HHHHSSCCCCCCCHH
T ss_pred ccc---ccccCCCCccccCcc
Confidence 321 122347999999998
No 274
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.93 E-value=6.6e-26 Score=238.86 Aligned_cols=164 Identities=34% Similarity=0.493 Sum_probs=129.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc------ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+|+..+.||+|+||.||+|++ .+..||||++... ...+.+.+|+++++.++||||+++++++..++..|+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 5789999999999999999998 4788999988543 2346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC--------CCceEEe
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--------DYEPKIA 821 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~--------~~~~kl~ 821 (851)
|||+++++|.+++.. ..+++..++.++.|+++|++|||.....+|+||||||+||+++. ++.+||+
T Consensus 85 ~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999988742 35889999999999999999999431122999999999999986 6789999
Q ss_pred eecCccccCCCCCcccccccccccccccCC
Q 003065 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 822 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|||+++........ ...||+.|+|||
T Consensus 159 Dfg~~~~~~~~~~~----~~~~~~~y~aPE 184 (271)
T 3dtc_A 159 DFGLAREWHRTTKM----SAAGAYAWMAPE 184 (271)
T ss_dssp CCCC-----------------CCGGGSCHH
T ss_pred cCCccccccccccc----CCCCccceeCHH
Confidence 99999866543322 346899999998
No 275
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.93 E-value=4.9e-26 Score=254.57 Aligned_cols=170 Identities=27% Similarity=0.388 Sum_probs=128.5
Q ss_pred Ccc-CCeecccCcEEEEEEEEc--CCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEe--CCeeEEEEec
Q 003065 678 LEE-DNLIGSGGTGKVYRLDLK--KNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFLVLEY 752 (851)
Q Consensus 678 ~~~-~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 752 (851)
|++ .++||+|+||.||+|+++ .+++.||||++......+.+.+|++++++++||||+++++++.. ....|+||||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~ 101 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 101 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence 554 568999999999999976 46788999999776666778899999999999999999999954 6788999999
Q ss_pred cCCCCHHHHHHHhhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE----CCCCceEEeeec
Q 003065 753 MPNGNLFQALHKRVKE----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFG 824 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFG 824 (851)
++ ++|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||
T Consensus 102 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 102 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp CS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred CC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 95 6898888754321 1224889999999999999999999 7899999999999999 677899999999
Q ss_pred CccccCCCCC-cccccccccccccccCC
Q 003065 825 VAKIAENSPK-VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 825 la~~~~~~~~-~~~~~~~~gt~~Y~APE 851 (851)
+|+....... .......+||+.|+|||
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE 205 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPE 205 (405)
T ss_dssp CCC----------------CCCTTCCHH
T ss_pred CceecCCCCcccccCCCceecCcccCch
Confidence 9987654322 12233467999999998
No 276
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.93 E-value=8.2e-26 Score=239.25 Aligned_cols=167 Identities=28% Similarity=0.447 Sum_probs=142.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++. ++..||||++... ...+.+.+|++++++++||||+++++++. .+..|+||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 46889999999999999999984 5678999998654 35678999999999999999999999886 456899999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+++|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 91 NGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp TCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999986532 125788999999999999999999 78999999999999999999999999999987654432
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
. ......||+.|+|||
T Consensus 165 ~-~~~~~~~~~~y~aPE 180 (279)
T 1qpc_A 165 T-AREGAKFPIKWTAPE 180 (279)
T ss_dssp E-CCTTCCCCTTTSCHH
T ss_pred c-cccCCCCccCccChh
Confidence 1 223345788999998
No 277
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.92 E-value=5.8e-26 Score=246.26 Aligned_cols=167 Identities=24% Similarity=0.280 Sum_probs=140.4
Q ss_pred cCCccC-CeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 749 (851)
..|.+. +.||+|+||.||+|++..+++.||||++... .....+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 346665 8899999999999999999999999998653 3467889999999999 469999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---CCceEEeeecCc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVA 826 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla 826 (851)
|||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 108 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a 181 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181 (327)
T ss_dssp EECCTTEEGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred EEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence 9999999998887532 2356899999999999999999999 789999999999999987 789999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+....... .....||+.|+|||
T Consensus 182 ~~~~~~~~---~~~~~gt~~y~aPE 203 (327)
T 3lm5_A 182 RKIGHACE---LREIMGTPEYLAPE 203 (327)
T ss_dssp EEC------------CCCGGGCCHH
T ss_pred cccCCccc---cccccCCcCccCCe
Confidence 87654432 22357999999998
No 278
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.92 E-value=4.5e-26 Score=258.21 Aligned_cols=167 Identities=28% Similarity=0.443 Sum_probs=136.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|.+.. +..||||++... ...+.+.+|++++++++||||+++++++.. +..|+||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 367889999999999999999954 567999998754 356789999999999999999999999866 67899999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+|+|.+++.... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 262 ~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 262 KGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp TCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 999999997542 234788999999999999999999 78999999999999999999999999999987654322
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
. ......+|+.|+|||
T Consensus 336 ~-~~~~~~~~~~y~aPE 351 (452)
T 1fmk_A 336 T-ARQGAKFPIKWTAPE 351 (452)
T ss_dssp --------CCGGGSCHH
T ss_pred e-cccCCcccccccCHh
Confidence 1 122345788999998
No 279
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.92 E-value=6.7e-26 Score=252.84 Aligned_cols=181 Identities=23% Similarity=0.255 Sum_probs=146.2
Q ss_pred cceeeecccccccHHHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-cHHHHHHHHHHHHcCC--------
Q 003065 659 KWKLASFHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIR-------- 729 (851)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-------- 729 (851)
.+....++.+.+......+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++.++
T Consensus 20 ~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~ 99 (397)
T 1wak_A 20 DYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 99 (397)
T ss_dssp --CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGG
T ss_pred cCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCC
Confidence 3333444444444333468999999999999999999999999999999997553 3567889999999985
Q ss_pred CCccccEEEEEE----eCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CcEEeC
Q 003065 730 HRNILKLYACLL----KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRD 804 (851)
Q Consensus 730 h~niv~l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrD 804 (851)
|+||+++++++. .+...|+||||+ ++++.+++... ....+++..+..++.|++.||+||| ++ +|+|||
T Consensus 100 ~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrD 172 (397)
T 1wak_A 100 REMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTD 172 (397)
T ss_dssp GGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCC
T ss_pred cceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCC
Confidence 788999999987 455789999999 67887777653 2346899999999999999999999 66 999999
Q ss_pred CCCCCEEECCCC-------------------------------------------------ceEEeeecCccccCCCCCc
Q 003065 805 IKSSNILLDEDY-------------------------------------------------EPKIADFGVAKIAENSPKV 835 (851)
Q Consensus 805 lkp~NILl~~~~-------------------------------------------------~~kl~DFGla~~~~~~~~~ 835 (851)
|||+|||++.++ .+||+|||+|+.....
T Consensus 173 ikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--- 249 (397)
T 1wak_A 173 IKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--- 249 (397)
T ss_dssp CSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---
T ss_pred CCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---
Confidence 999999999775 7999999999876543
Q ss_pred ccccccccccccccCC
Q 003065 836 SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 836 ~~~~~~~gt~~Y~APE 851 (851)
.....||+.|+|||
T Consensus 250 --~~~~~gt~~y~aPE 263 (397)
T 1wak_A 250 --FTEDIQTRQYRSLE 263 (397)
T ss_dssp --SCSCCSCGGGCCHH
T ss_pred --CccCCCCCcccCCh
Confidence 22347999999998
No 280
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.92 E-value=1.3e-25 Score=239.85 Aligned_cols=168 Identities=22% Similarity=0.255 Sum_probs=140.4
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEE-EEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYA-CLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++..+++.||||++......+.+.+|+++++.++|++++..+. ++..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-
Confidence 579999999999999999999999999999998766655566889999999999888776554 557788889999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---CCCCceEEeeecCccccCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~ 831 (851)
+++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+....
T Consensus 88 ~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 88 GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999998753 345899999999999999999999 7899999999999999 7889999999999987655
Q ss_pred CCCc-----ccccccccccccccCC
Q 003065 832 SPKV-----SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~-----~~~~~~~gt~~Y~APE 851 (851)
.... .......||+.|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE 185 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASIN 185 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHH
T ss_pred cccCccCCCCcccccCCCccccchH
Confidence 4321 1223467999999998
No 281
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.92 E-value=2.2e-25 Score=238.06 Aligned_cols=168 Identities=22% Similarity=0.255 Sum_probs=143.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEE-EEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYA-CLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++..+++.||||++......+.+.+|+++++.++|++++..+. ++..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 478999999999999999999999999999999877666667899999999999888766544 556778889999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---CCCCceEEeeecCccccCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~ 831 (851)
+++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++....
T Consensus 88 ~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 88 GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99999999753 345899999999999999999999 7899999999999999 4788999999999987665
Q ss_pred CCCcc-----cccccccccccccCC
Q 003065 832 SPKVS-----DYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~-----~~~~~~gt~~Y~APE 851 (851)
..... ......||+.|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE 185 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASIN 185 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHH
T ss_pred cccccccccccccccccccccCChh
Confidence 43211 123467999999998
No 282
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.92 E-value=4e-26 Score=241.51 Aligned_cols=164 Identities=29% Similarity=0.454 Sum_probs=134.8
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeC-CeeEEEEecc
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG-GSSFLVLEYM 753 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~~ 753 (851)
.++|+..+.||+|+||.||+|++ +++.||||++......+.+.+|++++++++||||+++++++... +..|+||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 35789999999999999999987 47899999998777778899999999999999999999987544 5789999999
Q ss_pred CCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCC
Q 003065 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (851)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 833 (851)
++++|.+++.... ...+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 98 AKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp TTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 9999999997652 123678889999999999999999 7899999999999999999999999999998654332
Q ss_pred CcccccccccccccccCC
Q 003065 834 KVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 834 ~~~~~~~~~gt~~Y~APE 851 (851)
. ...+++.|+|||
T Consensus 172 ~-----~~~~~~~y~aPE 184 (278)
T 1byg_A 172 D-----TGKLPVKWTAPE 184 (278)
T ss_dssp ---------CCTTTSCHH
T ss_pred c-----CCCccccccCHH
Confidence 1 235789999998
No 283
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.92 E-value=1.6e-25 Score=242.70 Aligned_cols=169 Identities=29% Similarity=0.433 Sum_probs=142.7
Q ss_pred cCCccCCeecccCcEEEEEEEE----cCCCcEEEEEEecccc--cHHHHHHHHHHHHcCCCCccccEEEEEEeCC--eeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 747 (851)
.+|++.+.||+|+||.||+|++ ..+++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4688999999999999999984 5678899999986543 3567899999999999999999999886543 689
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++++|.+++... ...+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 121 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 999999999999999763 345889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcc-cccccccccccccCC
Q 003065 828 IAENSPKVS-DYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~-~~~~~~gt~~Y~APE 851 (851)
......... ......||..|+|||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE 218 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPE 218 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHH
T ss_pred hccccccccccccCCCCceeEECch
Confidence 776543221 122345788899998
No 284
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.92 E-value=2.9e-25 Score=242.42 Aligned_cols=171 Identities=32% Similarity=0.427 Sum_probs=144.3
Q ss_pred HHHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHc--CCCCccccEEEEEEeCC----e
Q 003065 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKGG----S 745 (851)
Q Consensus 672 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~ 745 (851)
....++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|+++++. ++||||+++++++...+ .
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG-GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch-hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 34456899999999999999999998 5889999998644 45667889999887 78999999999998775 7
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCcEEeCCCCCCEEECCCCceEE
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD-----CSPPIIHRDIKSSNILLDEDYEPKI 820 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~kl 820 (851)
.|+||||+++|+|.+++.+. .+++..++.++.|++.|++|||.. ++.+|+||||||+||+++.++.+||
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL 188 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEE
T ss_pred eEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEE
Confidence 89999999999999999752 488999999999999999999932 1368999999999999999999999
Q ss_pred eeecCccccCCCCCcc--cccccccccccccCC
Q 003065 821 ADFGVAKIAENSPKVS--DYSCFAGTHGYIAPG 851 (851)
Q Consensus 821 ~DFGla~~~~~~~~~~--~~~~~~gt~~Y~APE 851 (851)
+|||+++......... ......||+.|+|||
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 221 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHH
T ss_pred EECCCceeccccccccccccccCCcCcccCCHh
Confidence 9999998765543221 123457999999998
No 285
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.92 E-value=2.4e-25 Score=241.56 Aligned_cols=169 Identities=27% Similarity=0.352 Sum_probs=129.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHH-HHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEME-ILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
++|+..+.||+|+||.||+|.+..+++.||||++.... ....+.+|+. +++.++||||+++++++..++..|+|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57899999999999999999999999999999986542 2344556666 6777899999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
|++ ++|.+++..........+++..+..++.|++.|+.||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 997 58888887654444567899999999999999999999 66 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccccccCC
Q 003065 831 NSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~~~~~~~~gt~~Y~APE 851 (851)
..... ....||+.|+|||
T Consensus 178 ~~~~~---~~~~gt~~y~aPE 195 (327)
T 3aln_A 178 DSIAK---TRDAGCRPYMAPE 195 (327)
T ss_dssp ---------------------
T ss_pred ccccc---ccCCCCccccCce
Confidence 43221 2246999999998
No 286
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.7e-25 Score=243.66 Aligned_cols=169 Identities=25% Similarity=0.340 Sum_probs=131.1
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--cHHHHHHHHHHHHcCC-CCccccEEEEEE--------eCCe
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIR-HRNILKLYACLL--------KGGS 745 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~~~ 745 (851)
+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 6889999999999999999999999999999885543 3566889999999996 999999999984 3345
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--cEEeCCCCCCEEECCCCceEEeee
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIADF 823 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DF 823 (851)
.++||||++ |+|.+++.... ....+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred EEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 799999995 79999987643 2346899999999999999999999 677 999999999999999999999999
Q ss_pred cCccccCCCCCcc----------cccccccccccccCC
Q 003065 824 GVAKIAENSPKVS----------DYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~----------~~~~~~gt~~Y~APE 851 (851)
|+++......... ......||+.|+|||
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE 220 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPE 220 (337)
T ss_dssp TTCBCCSSCC----------------------------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChh
Confidence 9998765432211 111346999999998
No 287
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.92 E-value=2.4e-25 Score=252.54 Aligned_cols=168 Identities=21% Similarity=0.264 Sum_probs=144.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCC-CccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH-RNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|++.+.||+|+||.||+|++..+++.||||++......+.+.+|+++++.++| ++|+.+..++...+..|+||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 4799999999999999999999999999999998766656678899999999987 55556777778888999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---CCCCceEEeeecCccccCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~ 831 (851)
+++|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+|+....
T Consensus 86 g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 86 GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99999999753 346899999999999999999999 7899999999999999 6888999999999987765
Q ss_pred CCCcc-----cccccccccccccCC
Q 003065 832 SPKVS-----DYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~~~~-----~~~~~~gt~~Y~APE 851 (851)
..... ......||+.|+|||
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE 183 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVN 183 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred CccccccccccccccCCCccccCHH
Confidence 43221 122567999999998
No 288
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.2e-25 Score=237.00 Aligned_cols=163 Identities=21% Similarity=0.233 Sum_probs=79.8
Q ss_pred cccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcc
Q 003065 188 SIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLL 267 (851)
Q Consensus 188 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 267 (851)
.+..+++|++|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|
T Consensus 80 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 159 (272)
T 3rfs_A 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNL 159 (272)
T ss_dssp GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccC
Confidence 34444555555555555554444444555555555555555554444444555555555555555554444444555555
Q ss_pred cEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCC
Q 003065 268 QEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISEN 347 (851)
Q Consensus 268 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N 347 (851)
++|++++|++++..+..+.++++|++|++++|++++..|..|..+++|+.|++++|.+.+. +++|+.|+++.|
T Consensus 160 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n 232 (272)
T 3rfs_A 160 TELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWIN 232 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHH
T ss_pred CEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHH
Confidence 5555555555544444445555555555555555544444444445555555554444422 223444444444
Q ss_pred cccccCchhh
Q 003065 348 QFSGSFPKYL 357 (851)
Q Consensus 348 ~l~~~~p~~~ 357 (851)
+++|.+|.++
T Consensus 233 ~~~g~ip~~~ 242 (272)
T 3rfs_A 233 KHSGVVRNSA 242 (272)
T ss_dssp HTGGGBBCTT
T ss_pred hCCCcccCcc
Confidence 4444444443
No 289
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.92 E-value=2.2e-25 Score=237.46 Aligned_cols=167 Identities=25% Similarity=0.287 Sum_probs=138.4
Q ss_pred cCCccCC-eecccCcEEEEEEEE--cCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 676 CNLEEDN-LIGSGGTGKVYRLDL--KKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 676 ~~~~~~~-~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
.+|.+.+ .||+|+||.||+|.+ ..+++.||||++.... ..+.+.+|+++++.++||||+++++++ ..+..|+
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 3677777 999999999999954 4567889999986542 256788999999999999999999998 5667899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 95 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999763 35888999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCcc-cccccccccccccCC
Q 003065 829 AENSPKVS-DYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~-~~~~~~gt~~Y~APE 851 (851)
........ ......||+.|+|||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE 190 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPE 190 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHH
T ss_pred eccCCCcccccccCCCCceeeChH
Confidence 65543321 122335678999998
No 290
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.8e-25 Score=237.66 Aligned_cols=167 Identities=25% Similarity=0.336 Sum_probs=139.6
Q ss_pred CCccCC-eecccCcEEEEEEEEc--CCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 677 NLEEDN-LIGSGGTGKVYRLDLK--KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 677 ~~~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
+|.+.+ .||+|+||.||+|.+. .++..||||++... ...+.+.+|++++++++||||+++++++ ..+..|+||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 455555 8999999999999864 46778999998764 2456788999999999999999999999 456689999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccC
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++++|.+++... ...+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 89 EMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp ECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 999999999998642 346899999999999999999999 7899999999999999999999999999998775
Q ss_pred CCCCc-ccccccccccccccCC
Q 003065 831 NSPKV-SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~~-~~~~~~~gt~~Y~APE 851 (851)
..... .......||+.|+|||
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE 183 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPE 183 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHH
T ss_pred cCcceeeccccccccccccCHH
Confidence 44322 1122345789999998
No 291
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.92 E-value=3.3e-25 Score=235.72 Aligned_cols=168 Identities=31% Similarity=0.457 Sum_probs=146.5
Q ss_pred HHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 673 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
...++|++.+.||+|+||.||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+..|+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 3446899999999999999999999989999999998543 356788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC---CceEEeeecC
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFGV 825 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl 825 (851)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.+ +.+||+|||+
T Consensus 99 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 99 VGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 99999999999988764 25789999999999999999999 7799999999999999754 4699999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++........ ....||+.|+|||
T Consensus 171 ~~~~~~~~~~---~~~~~~~~y~aPE 193 (287)
T 2wei_A 171 STCFQQNTKM---KDRIGTAYYIAPE 193 (287)
T ss_dssp GGTBCCCSSC---SCHHHHHTTCCHH
T ss_pred ceeecCCCcc---ccccCcccccChH
Confidence 9876544322 2346899999998
No 292
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=5.3e-26 Score=250.61 Aligned_cols=168 Identities=29% Similarity=0.378 Sum_probs=129.9
Q ss_pred CCccCCeecccCcEEEEEEEEcCCC---cEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEE-eCCeeEEE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNA---GTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLL-KGGSSFLV 749 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv 749 (851)
.|+..+.||+|+||.||+|++..++ ..||||.+... ...+.+.+|+.++++++||||+++++++. .++..|+|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999975433 35899988543 34567899999999999999999999864 45678999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 170 ~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EECCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EECCCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999753 345788899999999999999999 789999999999999999999999999999866
Q ss_pred CCCCCc--ccccccccccccccCC
Q 003065 830 ENSPKV--SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~--~~~~~~~gt~~Y~APE 851 (851)
...... .......||+.|+|||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE 266 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALE 266 (373)
T ss_dssp ---------------CCGGGSCHH
T ss_pred cccccccccccCCCCCcccccChH
Confidence 443211 1122346788999998
No 293
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.92 E-value=2.3e-25 Score=244.43 Aligned_cols=166 Identities=25% Similarity=0.397 Sum_probs=140.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeC-----CeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 747 (851)
++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+|++++++++||||+++++++... ...|
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 47899999999999999999999999999999986443 345678999999999999999999987654 6789
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||++ ++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 91 lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 9999996 699998875 25889999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcc--------cccccccccccccCC
Q 003065 828 IAENSPKVS--------DYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~--------~~~~~~gt~~Y~APE 851 (851)
......... ......||+.|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 192 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHH
T ss_pred ccccccccccCccccccchhhccccccccCCe
Confidence 765432111 122357899999998
No 294
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.92 E-value=1.6e-25 Score=237.31 Aligned_cols=167 Identities=27% Similarity=0.381 Sum_probs=138.1
Q ss_pred cCCccCCeecccCcEEEEEEEEcCC---CcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+|+..+.||+|+||.||+|++... +..||||++... ...+.+.+|++++++++||||+++++++.. +..|+|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 4788999999999999999987543 345999998654 245678899999999999999999999865 456899
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++++|.+++... ...+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 91 MELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 9999999999999764 345789999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ......||+.|+|||
T Consensus 164 ~~~~~~-~~~~~~~~~~y~aPE 184 (281)
T 3cc6_A 164 EDEDYY-KASVTRLPIKWMSPE 184 (281)
T ss_dssp ----------CCCCCGGGCCHH
T ss_pred cccccc-ccccCCCCcceeCch
Confidence 543321 122345788999998
No 295
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.92 E-value=7.3e-26 Score=247.47 Aligned_cols=167 Identities=19% Similarity=0.225 Sum_probs=134.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcC---CCcEEEEEEeccccc-------------HHHHHHHHHHHHcCCCCccccEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKGDG-------------VKVFAAEMEILGKIRHRNILKLYAC 739 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~-------------~~~~~~E~~~l~~l~h~niv~l~~~ 739 (851)
.+|++.+.||+|+||.||+|++.. ++..||||++..... .+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 468999999999999999999976 778899999865421 1235678889999999999999999
Q ss_pred EEe----CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC
Q 003065 740 LLK----GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED 815 (851)
Q Consensus 740 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~ 815 (851)
+.. ....|+||||+ +++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccC
Confidence 987 67889999999 99999998753 26899999999999999999999 7799999999999999887
Q ss_pred C--ceEEeeecCccccCCCCCc-----ccccccccccccccCC
Q 003065 816 Y--EPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 816 ~--~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~APE 851 (851)
+ .+||+|||+|+........ .......||+.|+|||
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 230 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLD 230 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHH
Confidence 7 9999999999876432211 1123457999999998
No 296
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.92 E-value=4.7e-26 Score=250.59 Aligned_cols=161 Identities=29% Similarity=0.402 Sum_probs=124.3
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeC------Ce
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------GS 745 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 745 (851)
.+|+..+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 4799999999999999999999999999999998543 2356788999999999999999999998654 56
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecC
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 825 (851)
.|+|+||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred EEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 79999999 7899888754 35889999999999999999999 78999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+..... ....+||++|+|||
T Consensus 179 a~~~~~~-----~~~~~~t~~y~aPE 199 (367)
T 2fst_X 179 ARHTADE-----MTGYVATRWYRAPE 199 (367)
T ss_dssp -----------------CCCTTCCHH
T ss_pred ccccccc-----CCCcCcCcCccChH
Confidence 9865432 23357999999998
No 297
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.92 E-value=3.3e-25 Score=243.85 Aligned_cols=174 Identities=25% Similarity=0.302 Sum_probs=133.5
Q ss_pred HHHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCe-----
Q 003065 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS----- 745 (851)
Q Consensus 672 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 745 (851)
...+++|++.+.||+|+||.||+|++..+++.||||++... .....+.+|++.++.++||||+++++++...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 45678999999999999999999999999999999988544 234456788888999999999999999876443
Q ss_pred --eEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC-CCceEEee
Q 003065 746 --SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIAD 822 (851)
Q Consensus 746 --~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~D 822 (851)
.++||||+++ ++.+.+.... .....+++..+..++.|++.|+.|||.. +.+|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred eeEEEEeecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 7899999975 6666665432 2345678889999999999999999943 579999999999999996 89999999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+|+........ ....||+.|+|||
T Consensus 176 fg~a~~~~~~~~~---~~~~gt~~y~aPE 201 (360)
T 3e3p_A 176 FGSAKKLSPSEPN---VAYICSRYYRAPE 201 (360)
T ss_dssp CTTCBCCCTTSCC---CSTTSCGGGCCHH
T ss_pred CCCceecCCCCCc---ccccCCcceeCHH
Confidence 9999876644322 2357899999998
No 298
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.92 E-value=2.1e-25 Score=240.96 Aligned_cols=165 Identities=31% Similarity=0.403 Sum_probs=139.0
Q ss_pred CccCCeecccCcEEEEEEEE----cCCCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeC--CeeEE
Q 003065 678 LEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSFL 748 (851)
Q Consensus 678 ~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 748 (851)
|+..+.||+|+||.||+|.. ..+++.||||++.... ..+.+.+|++++++++||||+++++++... ...|+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48899999999999988764 3477889999997653 345688999999999999999999999874 57899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++|+|.+++... .+++..++.++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 113 v~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999998652 3889999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCc-ccccccccccccccCC
Q 003065 829 AENSPKV-SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~Y~APE 851 (851)
....... .......||+.|+|||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE 207 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPE 207 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHH
T ss_pred ccccccccccccCCCCCceeeChH
Confidence 7654322 1123356889999998
No 299
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1e-24 Score=229.75 Aligned_cols=226 Identities=20% Similarity=0.204 Sum_probs=184.2
Q ss_pred CeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCcccccc
Q 003065 147 EIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICR 226 (851)
Q Consensus 147 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 226 (851)
..++++.+.+... ..+..+++|++|++++|.+. .+ ..+..+++|++|++++|++++. ..+.++++|++|++++
T Consensus 22 ~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~--~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 22 IKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK--SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC--CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHhcCcccccc--cccccccceeeeeeCCCCcc--cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 3344444444322 23456677777777777765 33 3578889999999999999863 4788999999999999
Q ss_pred ccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCC
Q 003065 227 NKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFP 306 (851)
Q Consensus 227 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 306 (851)
|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|++++..+..+.++++|+.|++++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 99998888889999999999999999998888889999999999999999998777788999999999999999998877
Q ss_pred CCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccc
Q 003065 307 SGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKT 386 (851)
Q Consensus 307 ~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~ 386 (851)
..|+.+++|++|++++|++++..|..+..+++|+.|++++|.+.+.. +.+..+.+..|++.|.+|.+++.+..
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-------~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-------PGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT-------TTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC-------cHHHHHHHHHHhCCCcccCcccccCC
Confidence 78899999999999999999988888999999999999999887543 34566666666666666666655543
No 300
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.92 E-value=6.6e-26 Score=248.19 Aligned_cols=168 Identities=21% Similarity=0.266 Sum_probs=144.0
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccccc-------------------HHHHHHHHHHHHcCCCCcccc
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG-------------------VKVFAAEMEILGKIRHRNILK 735 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------------~~~~~~E~~~l~~l~h~niv~ 735 (851)
+++|++.+.||+|+||.||+|++ +++.||||++..... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 35899999999999999999998 889999999854311 178999999999999999999
Q ss_pred EEEEEEeCCeeEEEEeccCCCCHHHHHHHh---hhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-CCcEEeCCCCCCEE
Q 003065 736 LYACLLKGGSSFLVLEYMPNGNLFQALHKR---VKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNIL 811 (851)
Q Consensus 736 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivHrDlkp~NIL 811 (851)
+++++...+..|+||||+++|+|.+++... .......+++..+..++.|++.|+.||| + .+|+||||||+||+
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNIL 184 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEE
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEE
Confidence 999999999999999999999998873211 0112456899999999999999999999 5 89999999999999
Q ss_pred ECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 812 LDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 812 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++.++.+||+|||.++..... ......||+.|+|||
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE 220 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPE 220 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGG
T ss_pred EcCCCcEEEeccccccccccc----cccCCCCCcCccCch
Confidence 999999999999999876543 123357999999998
No 301
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.92 E-value=1.5e-25 Score=249.38 Aligned_cols=165 Identities=30% Similarity=0.438 Sum_probs=133.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEeCCe------eEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGS------SFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~lv 749 (851)
.+|+..+.||+|+||.||+|++..+++ ||+|++..... ...+|+++++.++||||+++++++...+. .|+|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~--~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR--FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc--hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 368899999999999999999976654 88888754422 22479999999999999999999865443 7899
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC-CCCceEEeeecCccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPKIADFGVAKI 828 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~ 828 (851)
|||+++ ++.+.+..... ....+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+|+.
T Consensus 117 ~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 117 LEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred eeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999975 55554443322 2456889999999999999999999 78999999999999999 789999999999987
Q ss_pred cCCCCCcccccccccccccccCC
Q 003065 829 AENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
....... ....||+.|+|||
T Consensus 192 ~~~~~~~---~~~~~t~~y~aPE 211 (394)
T 4e7w_A 192 LIAGEPN---VSYICSRYYRAPE 211 (394)
T ss_dssp CCTTCCC---CSSCSCGGGCCHH
T ss_pred ccCCCCC---cccccCcCccCHH
Confidence 6544322 2357899999998
No 302
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.92 E-value=5.4e-25 Score=239.77 Aligned_cols=164 Identities=24% Similarity=0.352 Sum_probs=141.4
Q ss_pred cCCccCCeecccCcEEEEEEEE-cCCCcEEEEEEecccc-cHHHHHHHHHHHHcCCCCc------cccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDL-KKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRN------ILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~~ 747 (851)
.+|++.+.||+|+||.||+|.+ ..+++.||||++.... ..+.+.+|+++++.++|++ ++++++++...+..|
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 4789999999999999999998 5678899999986543 3567889999999987665 999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC-------------
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE------------- 814 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~------------- 814 (851)
+||||+ +++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 94 lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999 89999999764 2345789999999999999999999 789999999999999987
Q ss_pred ------CCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 815 ------DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 815 ------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++.+||+|||+++...... ....||+.|+|||
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE 204 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPE 204 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHH
T ss_pred ccccccCCCceEeeCcccccCcccc-----ccccCCccccChH
Confidence 6689999999998654332 2357999999998
No 303
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.92 E-value=1.1e-25 Score=260.36 Aligned_cols=167 Identities=28% Similarity=0.448 Sum_probs=141.5
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
++|+..+.||+|+||.||+|++.. +..||||++... ...+.|.+|++++++++||||+++++++.. +..|+||||++
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 367889999999999999999954 567999998754 356789999999999999999999999866 67899999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCC
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 834 (851)
+|+|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 345 ~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 345 KGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp TEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred CCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 999999997542 234788999999999999999999 7899999999999999999999999999998765321
Q ss_pred cccccccccccccccCC
Q 003065 835 VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 835 ~~~~~~~~gt~~Y~APE 851 (851)
........++..|+|||
T Consensus 418 ~~~~~~~~~~~~y~aPE 434 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPE 434 (535)
T ss_dssp HHTTCSTTSCGGGSCHH
T ss_pred eecccCCcCcccccCHH
Confidence 11122345788999998
No 304
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.92 E-value=1.4e-25 Score=247.73 Aligned_cols=162 Identities=10% Similarity=0.032 Sum_probs=121.6
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHHHHcC--CCCccccEE-------EEEEe
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKI--RHRNILKLY-------ACLLK 742 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~~ 742 (851)
.|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++.+ +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 5889999999999999999999999999999997643 345567785544444 699988855 45543
Q ss_pred CC-----------------eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 003065 743 GG-----------------SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRR------YKIALGAAKGIAYLHHDCSPP 799 (851)
Q Consensus 743 ~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~ 799 (851)
.+ ..|+||||++ |+|.+++...... +.+..+ ..++.|++.||+||| +++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ 214 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV----YVFRGDEGILALHILTAQLIRLAANLQ---SKG 214 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc----cchhhhhhhhhHHHHHHHHHHHHHHHH---HCC
Confidence 32 3799999998 8999999875322 233334 677899999999999 789
Q ss_pred cEEeCCCCCCEEECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 800 IIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 800 ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+||||||+|||++.++.+||+|||+|+...... ....||+.|+|||
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE 261 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPRE 261 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHH
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChh
Confidence 9999999999999999999999999998664321 1245779999998
No 305
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.92 E-value=2e-25 Score=245.85 Aligned_cols=164 Identities=24% Similarity=0.330 Sum_probs=131.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-------------cHHHHHHHHHHHHcCCCCccccEEEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------------GVKVFAAEMEILGKIRHRNILKLYACLLK 742 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 742 (851)
.+|...+.||+|+||.||+|.+.. ++.||||++.... ..+.+.+|++++++++||||+++++++..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred cceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 579999999999999999999854 8899999885421 13678999999999999999999999854
Q ss_pred -----CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc
Q 003065 743 -----GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE 817 (851)
Q Consensus 743 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~ 817 (851)
....|+||||++ |++.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~ 172 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNND 172 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCC
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcCCCC
Confidence 236799999997 6898888742 346899999999999999999999 779999999999999999999
Q ss_pred eEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 818 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+||+|||+++....... .....||+.|+|||
T Consensus 173 ~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE 203 (362)
T 3pg1_A 173 ITICDFNLAREDTADAN---KTHYVTHRWYRAPE 203 (362)
T ss_dssp EEECCTTC------------------CGGGCCHH
T ss_pred EEEEecCcccccccccc---cceecccceecCcH
Confidence 99999999985544322 22357899999998
No 306
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=6.7e-27 Score=254.82 Aligned_cols=266 Identities=15% Similarity=0.223 Sum_probs=180.3
Q ss_pred CCcccceeEecCCCCceEEEecccCCcceecCccccCC--ccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCC
Q 003065 59 SPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISAL--QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGS 136 (851)
Q Consensus 59 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 136 (851)
-|..|.++.|++. .++.+|++++.+. +..+..+ ++++.|++++|.+++..|. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 3568999998743 5778888888776 3456666 7888888888888766554 55788888888888887654
Q ss_pred -CCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccc-cCCCCCCcccccCCCCCCeEecccc-ccccc-CCc
Q 003065 137 -VPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN-VYDEAEIPESIGNLKNLTYLFLAHC-NLRGR-IPE 211 (851)
Q Consensus 137 -~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~ 211 (851)
.+. +..+++|++|+|++|.+++..+..+..+++|++|++++| .++...+|..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 444 677888888888888877777777777888888888887 5553235666777778888888888 77654 456
Q ss_pred cccccc-ccCccccccc--ccc-ccccccccCCCcccEEEeeccC-ccCcCCcCcCCCCcccEEeccccc-ccCCCCccc
Q 003065 212 SISELR-ELGTLDICRN--KIS-GEFPRSIRKLQKLWKIELYANN-LTGELPAELGNLTLLQEFDISSNQ-MYGKLPEEI 285 (851)
Q Consensus 212 ~~~~l~-~L~~L~L~~N--~i~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l 285 (851)
.+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l 268 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGG
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHH
Confidence 677777 7777787777 444 4456666777777777777777 665666677777777777777774 221111245
Q ss_pred cCcCCccEEEccCCccCCCCCCCCCCcc-cccEEEeccCcCCCCCCCccC
Q 003065 286 GNLKNLTVFQCFKNNFSGEFPSGFGDMR-KLFAFSIYGNRFSGPFPENLG 334 (851)
Q Consensus 286 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~l~ 334 (851)
.++++|+.|++++| ++ ...+..+. ++..|++++|++++..|..++
T Consensus 269 ~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 269 GEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred hcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 66677777777766 22 11233332 255555566666655555544
No 307
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.1e-24 Score=229.25 Aligned_cols=180 Identities=22% Similarity=0.258 Sum_probs=92.0
Q ss_pred cccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCC
Q 003065 117 LSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLT 196 (851)
Q Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 196 (851)
++++++|+++++++|.++..++.+. ++++.|+|++|.+++..+..|.++++|++|+|++|.++ .+|.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT--KLQVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC--EEECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC--cccCC-CCCCcCC
Confidence 4555566666666666655544443 45666666666666555555555566666666555554 22222 4555566
Q ss_pred eEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEeccccc
Q 003065 197 YLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQ 276 (851)
Q Consensus 197 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 276 (851)
+|+|++|+++ .+|..+..+++|++|++++|+|++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666555 444445555555555555555554444444444445555555554444433444444444444444444
Q ss_pred ccCCCCccccCcCCccEEEccCCccC
Q 003065 277 MYGKLPEEIGNLKNLTVFQCFKNNFS 302 (851)
Q Consensus 277 l~~~~p~~l~~l~~L~~L~l~~N~l~ 302 (851)
+++..+..|.++++|+.|++++|+++
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC
Confidence 44333333344444444444444444
No 308
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=9.6e-26 Score=247.28 Aligned_cols=166 Identities=17% Similarity=0.180 Sum_probs=138.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcC--------CCcEEEEEEecccccHHHHHHHHHHHHcCCCCcccc------------
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKK--------NAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILK------------ 735 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~------------ 735 (851)
++|++.+.||+|+||.||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 478999999999999999999977 3788999998655 45779999999999999987
Q ss_pred ---EEEEEEe-CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEE
Q 003065 736 ---LYACLLK-GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNIL 811 (851)
Q Consensus 736 ---l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NIL 811 (851)
+++++.. ++..|+||||+ +++|.+++... ....+++..++.++.|++.||+||| +.+|+||||||+||+
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 6777766 67889999999 99999999863 1246899999999999999999999 779999999999999
Q ss_pred ECCCC--ceEEeeecCccccCCCCCc-----ccccccccccccccCC
Q 003065 812 LDEDY--EPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 812 l~~~~--~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~APE 851 (851)
++.++ .+||+|||+|+........ .......||+.|+|||
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 238 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMD 238 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHH
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHH
Confidence 99998 8999999999866533211 1123357999999998
No 309
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.92 E-value=3.4e-25 Score=239.30 Aligned_cols=166 Identities=29% Similarity=0.417 Sum_probs=133.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--cHHHHHHHHHHHHcCCCCccccEEEEEE------------
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--GVKVFAAEMEILGKIRHRNILKLYACLL------------ 741 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~------------ 741 (851)
.+|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 47899999999999999999999999999999886543 4567889999999999999999999873
Q ss_pred --eCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC-CCCce
Q 003065 742 --KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEP 818 (851)
Q Consensus 742 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~-~~~~~ 818 (851)
..+..|+||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeE
Confidence 3467899999997 699988753 35788899999999999999999 78999999999999997 56799
Q ss_pred EEeeecCccccCCCCC-cccccccccccccccCC
Q 003065 819 KIADFGVAKIAENSPK-VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 819 kl~DFGla~~~~~~~~-~~~~~~~~gt~~Y~APE 851 (851)
||+|||+++....... ........||+.|+|||
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 194 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcH
Confidence 9999999987653321 11223356899999998
No 310
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.92 E-value=3.3e-25 Score=260.56 Aligned_cols=161 Identities=25% Similarity=0.293 Sum_probs=132.3
Q ss_pred CeecccCcEEEEEEEE--cCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccCC
Q 003065 682 NLIGSGGTGKVYRLDL--KKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (851)
Q Consensus 682 ~~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 755 (851)
+.||+|+||.||+|.+ ..+++.||||+++.. ...+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999965 456678999998653 235789999999999999999999999864 558899999999
Q ss_pred CCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCCc
Q 003065 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (851)
Q Consensus 756 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 835 (851)
|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+........
T Consensus 454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 9999999752 45889999999999999999999 789999999999999999999999999999876544321
Q ss_pred -ccccccccccccccCC
Q 003065 836 -SDYSCFAGTHGYIAPG 851 (851)
Q Consensus 836 -~~~~~~~gt~~Y~APE 851 (851)
.......||+.|+|||
T Consensus 526 ~~~~~~~~~t~~y~APE 542 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPE 542 (635)
T ss_dssp ---------CGGGSCHH
T ss_pred cccccCCCCceeeeChh
Confidence 1222345788999998
No 311
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.92 E-value=8.7e-25 Score=237.87 Aligned_cols=164 Identities=24% Similarity=0.338 Sum_probs=122.3
Q ss_pred cCCccC-CeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCccccEEEEEEe----CCeeEEEE
Q 003065 676 CNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 750 (851)
++|.+. +.||+|+||.||+|++..+++.||||++.... +...+....++.++||||+++++++.. +...|+||
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 478885 46999999999999999999999999986542 222233344667799999999999876 44589999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---CCceEEeeecCcc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVAK 827 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~ 827 (851)
||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++
T Consensus 106 e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 106 ECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp ECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred eccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 999999999999864 2346899999999999999999999 779999999999999976 4559999999998
Q ss_pred ccCCCCCcccccccccccccccCC
Q 003065 828 IAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... .....||+.|+|||
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE 199 (336)
T 3fhr_A 180 ETTQNA----LQTPCYTPYYVAPE 199 (336)
T ss_dssp EC----------------------
T ss_pred eccccc----cccCCCCcCccChh
Confidence 665432 22356899999998
No 312
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.92 E-value=3e-25 Score=260.33 Aligned_cols=161 Identities=23% Similarity=0.317 Sum_probs=132.4
Q ss_pred eecccCcEEEEEEEEcC--CCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEeccCCCC
Q 003065 683 LIGSGGTGKVYRLDLKK--NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (851)
Q Consensus 683 ~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 757 (851)
.||+|+||.||+|.++. ++..||||+++.. ...+.+.+|++++++++|||||++++++.. +..|+||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 79999999999998753 4567999998653 356789999999999999999999999876 56899999999999
Q ss_pred HHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCCCCCc-c
Q 003065 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV-S 836 (851)
Q Consensus 758 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~-~ 836 (851)
|.+++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+........ .
T Consensus 422 L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 422 LHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp HHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred HHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 99998642 346899999999999999999999 789999999999999999999999999999876543221 1
Q ss_pred cccccccccccccCC
Q 003065 837 DYSCFAGTHGYIAPG 851 (851)
Q Consensus 837 ~~~~~~gt~~Y~APE 851 (851)
......+|+.|+|||
T Consensus 495 ~~~~~~~~~~y~APE 509 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPE 509 (613)
T ss_dssp -------CCTTSCHH
T ss_pred eccCCCCccceeCHh
Confidence 112234678999998
No 313
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.92 E-value=2.2e-25 Score=246.10 Aligned_cols=160 Identities=29% Similarity=0.419 Sum_probs=135.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCee-----
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS----- 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 746 (851)
++|...+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4789999999999999999999999999999998653 2246788999999999999999999999876654
Q ss_pred -EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecC
Q 003065 747 -FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (851)
Q Consensus 747 -~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 825 (851)
|+||||++ ++|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 122 ~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred EEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999996 68877653 24889999999999999999999 77999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+..... .....||+.|+|||
T Consensus 191 a~~~~~~-----~~~~~~t~~y~aPE 211 (371)
T 4exu_A 191 ARHADAE-----MTGYVVTRWYRAPE 211 (371)
T ss_dssp C-------------CTTCCCTTSCHH
T ss_pred ccccccC-----cCCcccCccccCHH
Confidence 9865433 22357899999998
No 314
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.92 E-value=2.8e-25 Score=240.06 Aligned_cols=164 Identities=27% Similarity=0.384 Sum_probs=143.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--------cHHHHHHHHHHHHcCC--CCccccEEEEEEeCCe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIR--HRNILKLYACLLKGGS 745 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 745 (851)
.+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++ |+||+++++++..++.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 47899999999999999999999999999999986542 2245678999999996 5999999999999999
Q ss_pred eEEEEeccCC-CCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC-CCCceEEeee
Q 003065 746 SFLVLEYMPN-GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPKIADF 823 (851)
Q Consensus 746 ~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DF 823 (851)
.++||||+.+ ++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++ +++.+||+||
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred EEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 9999999976 8999999764 35788999999999999999999 78999999999999999 7889999999
Q ss_pred cCccccCCCCCcccccccccccccccCC
Q 003065 824 GVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 824 Gla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+++...... .....||+.|+|||
T Consensus 195 g~~~~~~~~~----~~~~~gt~~y~aPE 218 (320)
T 3a99_A 195 GSGALLKDTV----YTDFDGTRVYSPPE 218 (320)
T ss_dssp TTCEECCSSC----BCCCCSCGGGSCHH
T ss_pred cccccccccc----ccCCCCCccCCChH
Confidence 9998765432 22356999999998
No 315
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.91 E-value=2e-25 Score=240.34 Aligned_cols=164 Identities=27% Similarity=0.399 Sum_probs=137.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--------cHHHHHHHHHHHHcC----CCCccccEEEEEEeC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKI----RHRNILKLYACLLKG 743 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l----~h~niv~l~~~~~~~ 743 (851)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+++++++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 57999999999999999999999999999999986542 223356799999998 899999999999999
Q ss_pred CeeEEEEec-cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC-CCCceEEe
Q 003065 744 GSSFLVLEY-MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPKIA 821 (851)
Q Consensus 744 ~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~ 821 (851)
+..++|||| +++++|.+++... ..+++..++.++.|+++||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEEC
T ss_pred CeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEE
Confidence 999999999 7899999999864 25889999999999999999999 67999999999999999 88999999
Q ss_pred eecCccccCCCCCcccccccccccccccCC
Q 003065 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 822 DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|||+++...... .....||+.|+|||
T Consensus 183 dfg~~~~~~~~~----~~~~~~~~~y~aPE 208 (312)
T 2iwi_A 183 DFGSGALLHDEP----YTDFDGTRVYSPPE 208 (312)
T ss_dssp CCSSCEECCSSC----BCCCCSCTTTSCHH
T ss_pred EcchhhhcccCc----ccccCCcccccCce
Confidence 999998765432 23356999999998
No 316
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.91 E-value=3.4e-25 Score=264.04 Aligned_cols=159 Identities=25% Similarity=0.392 Sum_probs=137.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcC-CCcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCe-----e
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKK-NAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGS-----S 746 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 746 (851)
.+|++.+.||+|+||.||+|++.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 579999999999999999999976 68899999886542 34567899999999999999999999987665 6
Q ss_pred EEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCc
Q 003065 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (851)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 826 (851)
|+||||+++++|.+++.. .+++..++.++.|++.||.||| +.+|+||||||+||+++.+ .+||+|||++
T Consensus 160 ~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccc
Confidence 999999999999876542 5889999999999999999999 7899999999999999986 8999999999
Q ss_pred cccCCCCCcccccccccccccccCC
Q 003065 827 KIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+..... ....||+.|+|||
T Consensus 229 ~~~~~~------~~~~gt~~y~aPE 247 (681)
T 2pzi_A 229 SRINSF------GYLYGTPGFQAPE 247 (681)
T ss_dssp EETTCC------SCCCCCTTTSCTT
T ss_pred hhcccC------CccCCCccccCHH
Confidence 876543 2356999999999
No 317
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.91 E-value=5.8e-25 Score=238.33 Aligned_cols=166 Identities=27% Similarity=0.346 Sum_probs=138.8
Q ss_pred cCCccCCeecccCcEEEEEEEEc-CCCcEEEEEEecccc----cHHHHHHHHHHHHcC---CCCccccEEEEEE-----e
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLK-KNAGTVAVKQLWKGD----GVKVFAAEMEILGKI---RHRNILKLYACLL-----K 742 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 742 (851)
.+|++.+.||+|+||.||+|++. .+++.||||++.... ....+.+|+++++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 57999999999999999999995 677889999885432 223566788877766 8999999999987 4
Q ss_pred CCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEee
Q 003065 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (851)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 822 (851)
....++||||++ |+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred CceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 567899999997 6999998764 2345889999999999999999999 78999999999999999999999999
Q ss_pred ecCccccCCCCCcccccccccccccccCC
Q 003065 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 823 FGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
||+++...... ......||+.|+|||
T Consensus 164 fg~~~~~~~~~---~~~~~~~~~~y~aPE 189 (326)
T 1blx_A 164 FGLARIYSFQM---ALTSVVVTLWYRAPE 189 (326)
T ss_dssp CCSCCCCCGGG---GGCCCCCCCTTCCHH
T ss_pred CcccccccCCC---CccccccccceeCHH
Confidence 99998654322 223457899999998
No 318
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.91 E-value=1.5e-24 Score=240.42 Aligned_cols=167 Identities=25% Similarity=0.282 Sum_probs=141.6
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-cHHHHHHHHHHHHcCC-CC-----ccccEEEEEEeCCeeE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIR-HR-----NILKLYACLLKGGSSF 747 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~~ 747 (851)
..+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++.++ |+ +|+++++++...+..|
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 468999999999999999999999999999999997553 3466778999988875 44 4999999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEEC--CCCceEEeeecC
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD--EDYEPKIADFGV 825 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGl 825 (851)
+||||++ ++|.+++... ....+++..+..++.|++.||.|||.. +.+|+||||||+|||++ .++.+||+|||+
T Consensus 133 lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999995 6999999864 234588999999999999999999942 46899999999999995 477899999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|+...... ....||+.|+|||
T Consensus 208 a~~~~~~~-----~~~~~t~~y~aPE 228 (382)
T 2vx3_A 208 SCQLGQRI-----YQYIQSRFYRSPE 228 (382)
T ss_dssp CEETTCCC-----CSSCSCGGGCCHH
T ss_pred ceeccccc-----ccccCCccccChH
Confidence 98765432 2357999999998
No 319
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=3e-26 Score=252.13 Aligned_cols=260 Identities=16% Similarity=0.167 Sum_probs=138.0
Q ss_pred ecccCCcceecCccccCCccCcEEeCCCCcccCccC----cccccCC-CCceEecccCcccCCCCC-CCCC-----CCCC
Q 003065 79 SFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLP----LELSNCS-NLKVLNVTGNAMVGSVPD-LSAL-----KNLE 147 (851)
Q Consensus 79 ~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~~~-l~~l-----~~L~ 147 (851)
+++.++++|.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|.+.+..+. +..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 445555555555555555555555555555554443 4444555 555555555555544332 2222 4555
Q ss_pred eEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCC-CCCCeEecccccccccCCccccc-----ccccCc
Q 003065 148 IFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNL-KNLTYLFLAHCNLRGRIPESISE-----LRELGT 221 (851)
Q Consensus 148 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~ 221 (851)
+|||++|.+++..+..+... +..+ ++|++|+|++|++++..+..+.. .++|++
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~---------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 142 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKT---------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITS 142 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHH---------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCE
T ss_pred EEECcCCcCChHHHHHHHHH---------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeE
Confidence 55555555544444332222 2222 45555555555554433333222 135555
Q ss_pred cccccccccccc----cccccCCC-cccEEEeeccCccCcCCcCcC----CC-CcccEEecccccccCC----CCccccC
Q 003065 222 LDICRNKISGEF----PRSIRKLQ-KLWKIELYANNLTGELPAELG----NL-TLLQEFDISSNQMYGK----LPEEIGN 287 (851)
Q Consensus 222 L~L~~N~i~~~~----p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~l~~ 287 (851)
|+|++|++++.. +..+..++ +|++|+|++|++++..+..+. .. ++|++|||++|++++. ++..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 555555555322 22333343 566666666666544443322 22 4666666666666542 2333433
Q ss_pred -cCCccEEEccCCccCCCCC----CCCCCcccccEEEeccCcCCCCC-------CCccCCCCccceeeccCCcccccCch
Q 003065 288 -LKNLTVFQCFKNNFSGEFP----SGFGDMRKLFAFSIYGNRFSGPF-------PENLGRYTALTDVDISENQFSGSFPK 355 (851)
Q Consensus 288 -l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~-------p~~l~~l~~L~~L~Ls~N~l~~~~p~ 355 (851)
.++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. +..+..+++|+.||+++|++.+..+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 2466677777776665433 23456667777777777744332 34677888999999999999877665
Q ss_pred hhhh
Q 003065 356 YLCE 359 (851)
Q Consensus 356 ~~~~ 359 (851)
.+.+
T Consensus 303 ~~~~ 306 (362)
T 3goz_A 303 PISN 306 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 320
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.91 E-value=4.3e-25 Score=235.14 Aligned_cols=168 Identities=27% Similarity=0.380 Sum_probs=132.7
Q ss_pred cCCccCCeecccCcEEEEEEEEcC-CCc--EEEEEEeccc-----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKK-NAG--TVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~--~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 747 (851)
++|++.+.||+|+||.||+|++.. +++ .||||++... ...+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 478999999999999999998643 333 5899988643 34567889999999999999999999998765 89
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+||||+++++|.+++... ...+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 97 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccc
Confidence 999999999999999864 235788999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcc-cccccccccccccCC
Q 003065 828 IAENSPKVS-DYSCFAGTHGYIAPG 851 (851)
Q Consensus 828 ~~~~~~~~~-~~~~~~gt~~Y~APE 851 (851)
......... ......||+.|+|||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE 194 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPE 194 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHH
T ss_pred cccccccchhhhccCCCCceeeCch
Confidence 775543221 222346788999998
No 321
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=4.5e-26 Score=250.74 Aligned_cols=261 Identities=17% Similarity=0.182 Sum_probs=135.7
Q ss_pred cccccccccccccccccCCCcccEEEeeccCccCcCC----cCcCCCC-cccEEecccccccCCCCccccCc-----CCc
Q 003065 222 LDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP----AELGNLT-LLQEFDISSNQMYGKLPEEIGNL-----KNL 291 (851)
Q Consensus 222 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~L 291 (851)
++++.|.+++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4567777777777666666667777777777775554 5556666 67777777777766655555554 566
Q ss_pred cEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCC-CccceeeccCCcccccCchhhhhhcchHHHHhcc
Q 003065 292 TVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRY-TALTDVDISENQFSGSFPKYLCEKRKLLNLLALS 370 (851)
Q Consensus 292 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~ 370 (851)
++|++++|++++..+..+... +..+ ++|++|+|++|++++..+..++.
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~----------- 131 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQ----------- 131 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHH-----------
T ss_pred cEEECcCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHH-----------
Confidence 666666666654443322221 1111 34444555555444333322211
Q ss_pred CCccccccccccC-ccccceeccccCcccccc----CCcccCcc-ccceEEecCCcCCCCCCcccc----cC-CCCCeEe
Q 003065 371 NNFSGEVPNSYAD-CKTIQRLRISDNHLSGKI----PDGLWALP-NVGMLDFGDNDFTGGISPLIG----LS-TSLSQLV 439 (851)
Q Consensus 371 n~~~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~----p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~----~~-~~L~~L~ 439 (851)
.+.. .++|++|+|++|++++.. +..+..++ +|++|+|++|++++..+..+. .. ++|+.|+
T Consensus 132 ---------~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~ 202 (362)
T 3goz_A 132 ---------AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLD 202 (362)
T ss_dssp ---------HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred ---------HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEE
Confidence 1112 124555555555554322 22222232 455555555555444433222 22 3566666
Q ss_pred cCCCcceee----CCcccccC-CCCcEEeccCccccCCCc----cccccCCcccEEEecCCcccCC-------CCCCccc
Q 003065 440 LQNNRFSGE----LPSELGRL-TNLERLILTNNNFSGKIP----SALGALRQLSSLHLEENALTGS-------IPNEMGD 503 (851)
Q Consensus 440 Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~ 503 (851)
|++|++++. ++..+... ++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+.+. ++..+..
T Consensus 203 Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~ 282 (362)
T 3goz_A 203 LSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPN 282 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTT
T ss_pred CCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhcc
Confidence 666666532 33344442 366666666666665433 2345556666666666664322 2234555
Q ss_pred ccccceeeccCcccccccC
Q 003065 504 CARIVDLNLARNSLSGNIP 522 (851)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~p 522 (851)
+++|+.||+++|++.+..+
T Consensus 283 l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 283 IQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp CCEEEEECTTSCBCCGGGC
T ss_pred CCceEEEecCCCcCCCcch
Confidence 5566666666666655433
No 322
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.91 E-value=2.1e-24 Score=236.76 Aligned_cols=164 Identities=21% Similarity=0.294 Sum_probs=140.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCC-cEEEEEEeccc-ccHHHHHHHHHHHHcCCCCc------cccEEEEEEeCCeeE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNA-GTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN------ILKLYACLLKGGSSF 747 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~~ 747 (851)
++|++.+.||+|+||.||+|.+..++ +.||||++... ...+.+.+|++++++++|++ ++.+++++...+..|
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 57999999999999999999998776 68999998654 34566888999999997766 899999999999999
Q ss_pred EEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEE---------------
Q 003065 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL--------------- 812 (851)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl--------------- 812 (851)
+||||+ ++++.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 99 lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccc
Confidence 999999 67888887763 2346889999999999999999999 8899999999999999
Q ss_pred ----CCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 813 ----DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 813 ----~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+.++.+||+|||+++...... ....||+.|+|||
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE 209 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPE 209 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHH
T ss_pred cccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCe
Confidence 567899999999998654332 2357999999998
No 323
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=3.9e-24 Score=222.47 Aligned_cols=191 Identities=22% Similarity=0.226 Sum_probs=120.2
Q ss_pred CCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCC
Q 003065 59 SPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP 138 (851)
Q Consensus 59 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 138 (851)
+||.|.|++|... .+.+++++++++ .+|..+. +++++|+|++|.+++..|..|+++++|++|+|++|.+++.++
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5889999999532 336788888887 5666555 577788888888877777777777777777777777777666
Q ss_pred C-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccccc
Q 003065 139 D-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELR 217 (851)
Q Consensus 139 ~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 217 (851)
. +..+++|++|+|++|.+++..+..|..+++|++|+|++|.+ ++..+..|..++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l-------------------------~~~~~~~~~~l~ 131 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL-------------------------KSLPSGVFDRLT 131 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCC-------------------------CCCCTTTTTTCT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcC-------------------------CCcChhHhccCC
Confidence 5 67777777777777777655555555555555555555555 433333344445
Q ss_pred ccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCC
Q 003065 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (851)
Q Consensus 218 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (851)
+|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+.+.
T Consensus 132 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 132 KLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 555555555555544444455555555555555555555455555566666666666666543
No 324
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.91 E-value=1.2e-24 Score=234.49 Aligned_cols=165 Identities=24% Similarity=0.346 Sum_probs=134.6
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCC--CCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIR--HRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 749 (851)
++|++.+.||+|+||.||+|++. +++.||||++... ...+.+.+|++++++++ ||||+++++++..++..|+|
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 36899999999999999999985 5889999998543 23467889999999997 59999999999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|| +.+++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++ +.+||+|||+++..
T Consensus 107 ~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred Ee-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 99 5588999999763 35788899999999999999999 779999999999999965 79999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
.............||+.|+|||
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE 198 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPE 198 (313)
T ss_dssp -------------CCGGGCCHH
T ss_pred cCccccccccCCCCCCCcCCHH
Confidence 5443322223457999999998
No 325
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=3.8e-24 Score=220.87 Aligned_cols=201 Identities=18% Similarity=0.149 Sum_probs=127.4
Q ss_pred ecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCc-ccCCCCC-CCCCCCCCeEeccC-cccCCCCcccc
Q 003065 88 EISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNA-MVGSVPD-LSALKNLEIFDLSI-NYFTGRFPRWV 164 (851)
Q Consensus 88 ~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~~~-l~~l~~L~~L~Ls~-N~l~~~~~~~~ 164 (851)
.+|. +. ++|++|+|++|++++..+..|+++++|++|+|++|+ +++.++. +..+++|++|++++ |.+++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 3555 33 378888888888886666678888888888888886 7766664 77888888888887 88876666677
Q ss_pred cCccccceeecccccCCCCCCcccccCCCCCC---eEecccc-cccccCCcccccccccC-ccccccccccccccccccC
Q 003065 165 VNLTQLVSLSIGDNVYDEAEIPESIGNLKNLT---YLFLAHC-NLRGRIPESISELRELG-TLDICRNKISGEFPRSIRK 239 (851)
Q Consensus 165 ~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~L~~N~i~~~~p~~~~~ 239 (851)
.++++|++|++++|.++ .+|. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++...+..|..
T Consensus 102 ~~l~~L~~L~l~~n~l~--~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLK--MFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCC--SCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCc--cccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC
Confidence 77777777777777775 3555 66666666 6666666 66655555566666666 6666666665222223333
Q ss_pred CCcccEEEeeccC-ccCcCCcCcCCC-CcccEEecccccccCCCCccccCcCCccEEEccC
Q 003065 240 LQKLWKIELYANN-LTGELPAELGNL-TLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFK 298 (851)
Q Consensus 240 l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~ 298 (851)
++|++|++++|+ +++..+..|..+ ++|++|++++|++++ +|.. .+++|+.|++++
T Consensus 179 -~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 179 -TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARN 235 (239)
T ss_dssp -CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTT
T ss_pred -CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccC
Confidence 555556665553 554444455555 555555555555553 2222 334444444443
No 326
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.91 E-value=1.1e-24 Score=256.93 Aligned_cols=167 Identities=26% Similarity=0.308 Sum_probs=137.9
Q ss_pred cCCccCCeecccCcEEEEEEEEcCC---CcEEEEEEecccc---cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 749 (851)
.+|+..+.||+|+||.||+|.+..+ +..||||++.... ..+.+.+|+.++++++||||+++++++. .+..|+|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 4688999999999999999998643 4569999886532 3467889999999999999999999985 4568999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 469 ~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 9999999999999763 345889999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ......||+.|+|||
T Consensus 542 ~~~~~~-~~~~~~~t~~y~aPE 562 (656)
T 2j0j_A 542 EDSTYY-KASKGKLPIKWMAPE 562 (656)
T ss_dssp CC-----------CCGGGCCHH
T ss_pred CCCcce-eccCCCCCcceeCHH
Confidence 544322 122345788999998
No 327
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.91 E-value=4.4e-25 Score=242.13 Aligned_cols=160 Identities=28% Similarity=0.411 Sum_probs=135.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCe------
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGS------ 745 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 745 (851)
.+|...+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 47889999999999999999999999999999986532 24568899999999999999999999987654
Q ss_pred eEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecC
Q 003065 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (851)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 825 (851)
.|+||||++ ++|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred EEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999996 68766552 24889999999999999999999 78999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccCC
Q 003065 826 AKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 826 a~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
++..... .....||+.|+|||
T Consensus 173 ~~~~~~~-----~~~~~~t~~y~aPE 193 (353)
T 3coi_A 173 ARHADAE-----MTGYVVTRWYRAPE 193 (353)
T ss_dssp TTC-------------CCSBCCSCHH
T ss_pred ccCCCCC-----ccccccCcCcCCHH
Confidence 9865432 22357899999998
No 328
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.91 E-value=4.1e-25 Score=255.83 Aligned_cols=171 Identities=27% Similarity=0.373 Sum_probs=142.2
Q ss_pred HHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc---ccHHHHHHHHHHHHcCCCCccccEEEEEEe------C
Q 003065 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK------G 743 (851)
Q Consensus 673 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~ 743 (851)
..+++|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++.. +
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 3457899999999999999999999999999999998654 235668899999999999999999998755 6
Q ss_pred CeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCc---eEE
Q 003065 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKI 820 (851)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl 820 (851)
+..|+||||+++|+|.+++.... ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL 165 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKI 165 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred CeEEEEEEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEE
Confidence 67899999999999999997632 2235777888999999999999999 789999999999999997665 999
Q ss_pred eeecCccccCCCCCcccccccccccccccCC
Q 003065 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 821 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
+|||.++........ ....||+.|+|||
T Consensus 166 ~DFG~a~~~~~~~~~---~~~~gt~~Y~APE 193 (676)
T 3qa8_A 166 IDLGYAKELDQGELC---TEFVGTLQYLAPE 193 (676)
T ss_dssp CSCCCCCBTTSCCCC---CCCCSCCTTCSSC
T ss_pred ccccccccccccccc---ccccCCcccCChH
Confidence 999999876554322 3357999999998
No 329
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.91 E-value=1.2e-24 Score=240.58 Aligned_cols=164 Identities=24% Similarity=0.304 Sum_probs=140.2
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-cHHHHHHHHHHHHcCC-----------CCccccEEEEEEeC
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIR-----------HRNILKLYACLLKG 743 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~~ 743 (851)
.+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++ ||||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 47999999999999999999999999999999987543 4566789999999886 89999999998765
Q ss_pred C----eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CcEEeCCCCCCEEEC-----
Q 003065 744 G----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLD----- 813 (851)
Q Consensus 744 ~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDlkp~NILl~----- 813 (851)
+ ..++||||+ +++|.+++... ....+++..+..++.|++.||+||| ++ +|+||||||+||+++
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETT
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCC
Confidence 4 789999999 89999999864 2345889999999999999999999 66 999999999999994
Q ss_pred -CCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 814 -EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 814 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
..+.+||+|||+|+...... ....||+.|+|||
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE 205 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPE 205 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHH
T ss_pred cCcceEEEcccccccccCCCC-----CCCCCCccccCcH
Confidence 44579999999998765432 2347899999998
No 330
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=233.18 Aligned_cols=166 Identities=26% Similarity=0.402 Sum_probs=124.7
Q ss_pred HcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccccc----HHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
+.+|+..+.||+|+||.||+|++..+++.||||++..... .+.+.++..+++.++||||+++++++..++..|+||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 4578999999999999999999998999999999865432 223444556788889999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
||+ ++.+..+.... ...+++..+..++.|+++||.||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 104 e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp CCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred ecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 999 55555554432 345889999999999999999999 54 9999999999999999999999999999766
Q ss_pred CCCCCcccccccccccccccCC
Q 003065 830 ENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 830 ~~~~~~~~~~~~~gt~~Y~APE 851 (851)
...... ....||+.|+|||
T Consensus 176 ~~~~~~---~~~~~~~~y~aPE 194 (318)
T 2dyl_A 176 VDDKAK---DRSAGCAAYMAPE 194 (318)
T ss_dssp --------------CCTTCCHH
T ss_pred cCCccc---cccCCCccccChh
Confidence 543222 2346899999998
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=8e-24 Score=227.53 Aligned_cols=222 Identities=16% Similarity=0.138 Sum_probs=130.4
Q ss_pred cCcEEeCCCCcccCcc-Cc--ccccCCCCceEecccCcccCCCCC-C--CCCCCCCeEeccCcccCCCCc----ccccCc
Q 003065 98 SLTVLSLPFNVLSGKL-PL--ELSNCSNLKVLNVTGNAMVGSVPD-L--SALKNLEIFDLSINYFTGRFP----RWVVNL 167 (851)
Q Consensus 98 ~L~~L~L~~n~l~~~~-p~--~~~~l~~L~~L~Ls~n~l~~~~~~-l--~~l~~L~~L~Ls~N~l~~~~~----~~~~~l 167 (851)
.++.|.++++.++... .. .+..+++|++|+|++|.+.+..|. + ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4566777776664321 11 123446688888888887776665 4 777778888888877776544 334456
Q ss_pred cccceeecccccCCCCCCcccccCCCCCCeEeccccccccc--C--CcccccccccCccccccccccccccc----cccC
Q 003065 168 TQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGR--I--PESISELRELGTLDICRNKISGEFPR----SIRK 239 (851)
Q Consensus 168 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~i~~~~p~----~~~~ 239 (851)
++|++|+|++|.+. ...|..++.+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+..
T Consensus 145 ~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 145 PGLKVLSIAQAHSP-AFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp SCCCEEEEECCSSC-CCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred cCCCEEEeeCCCcc-hhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 77777777777775 34445666777777777777776542 1 2223566677777777777752 222 2455
Q ss_pred CCcccEEEeeccCccCcCCcCcCCC---CcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCccccc
Q 003065 240 LQKLWKIELYANNLTGELPAELGNL---TLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLF 316 (851)
Q Consensus 240 l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 316 (851)
+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|++++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 6666666666666666555555554 46666666666665 4444443 4555555555555532 21 34444444
Q ss_pred EEEeccCcCC
Q 003065 317 AFSIYGNRFS 326 (851)
Q Consensus 317 ~L~l~~N~l~ 326 (851)
.|++++|+++
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 4444444443
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.2e-23 Score=218.73 Aligned_cols=179 Identities=24% Similarity=0.271 Sum_probs=110.6
Q ss_pred ccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEecc
Q 003065 386 TIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (851)
Q Consensus 386 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 465 (851)
+.++++++++.++ .+|..+. ++++.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455566666655 4444432 456666666666666666566666666666666666665555556666666666666
Q ss_pred CccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCcccccc
Q 003065 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSI 545 (851)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i 545 (851)
+|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 66666555566666666666666666666555555666666666666666666555556666666666666666666554
Q ss_pred Ccccccc-cceEEeCcCCccccc
Q 003065 546 PDNLMKL-KLSSIDLSENQLSGS 567 (851)
Q Consensus 546 p~~l~~l-~L~~l~ls~N~l~~~ 567 (851)
|..+..+ .|+.|++++|+|.|.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 5555555 666666666666665
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=1.5e-25 Score=243.99 Aligned_cols=252 Identities=15% Similarity=0.178 Sum_probs=187.4
Q ss_pred cCcEEeCCCCcccCccCcccccC--CCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCC-CcccccCccccceee
Q 003065 98 SLTVLSLPFNVLSGKLPLELSNC--SNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGR-FPRWVVNLTQLVSLS 174 (851)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~ 174 (851)
.++.+++++|.+. |..+..+ +++++|++++|.+.+.++.+..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 4789999999887 5677888 899999999999999988888899999999999998866 777888889999999
Q ss_pred cccccCCCCCCcccccCCCCCCeEecccc-ccccc-CCcccccccccCccccccc-ccccc-ccccccCCC-cccEEEee
Q 003065 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHC-NLRGR-IPESISELRELGTLDICRN-KISGE-FPRSIRKLQ-KLWKIELY 249 (851)
Q Consensus 175 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~i~~~-~p~~~~~l~-~L~~L~L~ 249 (851)
+++|.++ ...|..++.+++|++|++++| .+++. ++..+.++++|++|++++| ++++. ++..+..++ +|++|+++
T Consensus 125 L~~~~l~-~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 125 LEGLRLS-DPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp CTTCBCC-HHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred CcCcccC-HHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 9998876 456777888899999999988 67753 5666778888888888888 88754 566778888 88888888
Q ss_pred cc--Ccc-CcCCcCcCCCCcccEEeccccc-ccCCCCccccCcCCccEEEccCCc-cCCCCCCCCCCcccccEEEeccCc
Q 003065 250 AN--NLT-GELPAELGNLTLLQEFDISSNQ-MYGKLPEEIGNLKNLTVFQCFKNN-FSGEFPSGFGDMRKLFAFSIYGNR 324 (851)
Q Consensus 250 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~ 324 (851)
+| .++ +.+|..+..+++|++|++++|. +++..+..+.++++|+.|++++|. +.......++.+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 88 454 3556666778888888888887 666667777778888888888875 22111114566666777777666
Q ss_pred CCCCCCCccCCC-CccceeeccCCcccccCchhh
Q 003065 325 FSGPFPENLGRY-TALTDVDISENQFSGSFPKYL 357 (851)
Q Consensus 325 l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~ 357 (851)
++ ...+..+ .+++.|++++|++++..|..+
T Consensus 283 i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 283 VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 22 1223333 235555566666665555444
No 334
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.90 E-value=6.4e-25 Score=237.23 Aligned_cols=165 Identities=27% Similarity=0.385 Sum_probs=135.0
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEEe
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 751 (851)
++|++.+.||+|+||.||+|++.. .||+|++... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 478999999999999999998843 4999988543 234557789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccccCC
Q 003065 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (851)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 831 (851)
|+++++|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++ ++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 110 LCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred cccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999998642 345888899999999999999999 78999999999999998 67999999999876532
Q ss_pred CC---CcccccccccccccccCC
Q 003065 832 SP---KVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 832 ~~---~~~~~~~~~gt~~Y~APE 851 (851)
.. .........||+.|+|||
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE 204 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPE 204 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHH
T ss_pred ccccccccccccCCCcccccChH
Confidence 21 111223356999999998
No 335
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.90 E-value=2.5e-24 Score=242.55 Aligned_cols=168 Identities=25% Similarity=0.358 Sum_probs=126.4
Q ss_pred CccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEEEeccCCC
Q 003065 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPNG 756 (851)
Q Consensus 678 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 756 (851)
|...+.||+|+||+||.+.. .+++.||||++... ..+.+.+|+++++++ +|||||++++++..++..|+||||++ |
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~-~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID-FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG-GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH-HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 45568899999999987544 67899999998654 345678999999886 89999999999999999999999995 6
Q ss_pred CHHHHHHHhhhCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCC-------------CceEEe
Q 003065 757 NLFQALHKRVKEGKP--ELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-------------YEPKIA 821 (851)
Q Consensus 757 sL~~~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~ 821 (851)
+|.+++......... ...+..++.++.|++.||+||| +.+|+||||||+|||++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 999999764221111 1123345679999999999999 7899999999999999754 489999
Q ss_pred eecCccccCCCCCcc--cccccccccccccCC
Q 003065 822 DFGVAKIAENSPKVS--DYSCFAGTHGYIAPG 851 (851)
Q Consensus 822 DFGla~~~~~~~~~~--~~~~~~gt~~Y~APE 851 (851)
|||+|+......... ......||+.|+|||
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 202 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHH
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHH
Confidence 999998776543211 123457999999998
No 336
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.90 E-value=1.7e-24 Score=243.26 Aligned_cols=165 Identities=24% Similarity=0.357 Sum_probs=127.5
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcC-CCCccccEEEEEEeCCeeEEEEeccCC
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 755 (851)
+|...+.||+|+||+||.. ...+++.||||++.... .+.+.+|+++++++ +|||||++++++.+.+..|+||||++
T Consensus 25 ~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~-~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPEC-FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTT-EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHH-HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 5788899999999997643 33578899999986542 22356899999999 79999999999999999999999995
Q ss_pred CCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC-----CCceEEeeecCccccC
Q 003065 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-----DYEPKIADFGVAKIAE 830 (851)
Q Consensus 756 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla~~~~ 830 (851)
|+|.+++.... .......+..++.|++.||+||| +.+|+||||||+||+++. ...+||+|||+|+...
T Consensus 102 g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 102 ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 69999987642 22333345689999999999999 789999999999999953 2358899999998765
Q ss_pred CCCC-cccccccccccccccCC
Q 003065 831 NSPK-VSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 831 ~~~~-~~~~~~~~gt~~Y~APE 851 (851)
.... ........||+.|+|||
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE 196 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPE 196 (432)
T ss_dssp -----------CCSCTTSCCGG
T ss_pred CCCcceeeccccCCCcCccChh
Confidence 4321 12233467999999998
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.2e-24 Score=228.37 Aligned_cols=200 Identities=22% Similarity=0.294 Sum_probs=161.3
Q ss_pred cchHHHHhccCCccccccccc--cCccccceeccccCccccccC----CcccCccccceEEecCCcCCCCCCcccccCCC
Q 003065 361 RKLLNLLALSNNFSGEVPNSY--ADCKTIQRLRISDNHLSGKIP----DGLWALPNVGMLDFGDNDFTGGISPLIGLSTS 434 (851)
Q Consensus 361 ~~L~~l~l~~n~~~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 434 (851)
++|++|++.+|.+.+..|..+ ..+++|++|+|++|++++..| ..++.+++|++|++++|++++.++..+..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 446666666677777777777 788899999999999987655 34567889999999999999888889999999
Q ss_pred CCeEecCCCcceee--C--CcccccCCCCcEEeccCccccCCCcc----ccccCCcccEEEecCCcccCCCCCCcccc--
Q 003065 435 LSQLVLQNNRFSGE--L--PSELGRLTNLERLILTNNNFSGKIPS----ALGALRQLSSLHLEENALTGSIPNEMGDC-- 504 (851)
Q Consensus 435 L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-- 504 (851)
|++|+|++|++.+. + +..+..+++|++|+|++|+++. +|. .+..+++|++|+|++|++++..|..++.+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 99999999998653 2 2334788999999999999973 333 35778999999999999998888888877
Q ss_pred -cccceeeccCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccc
Q 003065 505 -ARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSG 566 (851)
Q Consensus 505 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~ 566 (851)
++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++ +|. +..+ .|+.|++++|+++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC-Cch-hhhCCCccEEECcCCCCCC
Confidence 58999999999999 6787775 789999999999995 444 4555 78999999999874
No 338
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2e-24 Score=248.78 Aligned_cols=153 Identities=21% Similarity=0.245 Sum_probs=118.2
Q ss_pred ccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc----------cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEE
Q 003065 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 679 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 748 (851)
...+.||+|+||.||+|+. .++.+|+|+..... ..+++.+|++++++++||||+++..++...+..|+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 4567899999999999954 57789999764321 13457899999999999999966555557777899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
||||+++++|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+|+.
T Consensus 417 VmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~ 478 (540)
T 3en9_A 417 MMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKI 478 (540)
T ss_dssp EEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred EEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence 9999999999998764 3478999999999999 789999999999999998 999999999998
Q ss_pred cCCCCCcc-----cccccccccccccCC
Q 003065 829 AENSPKVS-----DYSCFAGTHGYIAPG 851 (851)
Q Consensus 829 ~~~~~~~~-----~~~~~~gt~~Y~APE 851 (851)
........ ....+.||+.|||||
T Consensus 479 ~~~~~~~~~~~~~~~~~~~GT~~y~APE 506 (540)
T 3en9_A 479 SNLDEDKAVDLIVFKKAVLSTHHEKFDE 506 (540)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred CCCccccccchhhhhhhhcCCCCcCCHH
Confidence 75532211 123568999999998
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=8.3e-26 Score=251.09 Aligned_cols=189 Identities=20% Similarity=0.280 Sum_probs=118.1
Q ss_pred ccCccccceeccccCcccc----ccCCcccCccccceEEecCCcCCCCCCcccc----cC---------CCCCeEecCCC
Q 003065 381 YADCKTIQRLRISDNHLSG----KIPDGLWALPNVGMLDFGDNDFTGGISPLIG----LS---------TSLSQLVLQNN 443 (851)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~~---------~~L~~L~Ls~N 443 (851)
+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++..+..+. .+ ++|++|+|++|
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCC
Confidence 3445556666666666554 3455555556666666666655433222222 22 66777777777
Q ss_pred cce-eeCC---cccccCCCCcEEeccCcccc--C---CCccccccCCcccEEEecCCccc----CCCCCCccccccccee
Q 003065 444 RFS-GELP---SELGRLTNLERLILTNNNFS--G---KIPSALGALRQLSSLHLEENALT----GSIPNEMGDCARIVDL 510 (851)
Q Consensus 444 ~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L 510 (851)
+++ +.+| ..+..+++|++|+|++|.++ | ..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|
T Consensus 170 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 765 3333 35556677777777777776 2 34446667777777777777775 4566667777777777
Q ss_pred eccCcccccc----cCCCcc--ccccCCeEeCCCCcccc----ccCccc-ccc-cceEEeCcCCcccccCC
Q 003065 511 NLARNSLSGN----IPRSLS--LLSSLNALNLSGNKLTG----SIPDNL-MKL-KLSSIDLSENQLSGSVP 569 (851)
Q Consensus 511 ~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~g----~ip~~l-~~l-~L~~l~ls~N~l~~~~p 569 (851)
+|++|.+++. +|..+. .+++|+.|+|++|++++ .+|..+ ..+ .|+.|++++|++++..|
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 7777777765 455553 36777777777777776 367666 444 67777777777776554
No 340
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.89 E-value=2.2e-23 Score=221.06 Aligned_cols=142 Identities=10% Similarity=0.003 Sum_probs=126.8
Q ss_pred cCCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc-----cHHHHHHHHHHHHcCCCCccccEEEEEEeCCeeEEEE
Q 003065 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (851)
Q Consensus 676 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 750 (851)
.+|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 46999999999999999999999889999999986542 2367889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
||++|++|.++++.. .....+.+++.|++.||+||| +.+|+||||||+||+++.+|.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999998431 245567889999999999999 7899999999999999999999999887653
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=6e-23 Score=211.88 Aligned_cols=85 Identities=24% Similarity=0.228 Sum_probs=45.0
Q ss_pred CCCeEecccccccccCCcccccccccCcccccccc-ccccccccccCCCcccEEEeec-cCccCcCCcCcCCCCcccEEe
Q 003065 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNK-ISGEFPRSIRKLQKLWKIELYA-NNLTGELPAELGNLTLLQEFD 271 (851)
Q Consensus 194 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 271 (851)
+|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55566666666654444455555555555555554 5544444555555555555554 555544444445555555555
Q ss_pred ccccccc
Q 003065 272 ISSNQMY 278 (851)
Q Consensus 272 Ls~N~l~ 278 (851)
+++|+++
T Consensus 112 l~~n~l~ 118 (239)
T 2xwt_C 112 IFNTGLK 118 (239)
T ss_dssp EEEECCC
T ss_pred CCCCCCc
Confidence 5555554
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.2e-25 Score=247.69 Aligned_cols=256 Identities=20% Similarity=0.249 Sum_probs=155.5
Q ss_pred cCCcCcCCCCcccEEecccccccCCCC----ccccCcCCccEEEccCCc---cCCCCCCCC-------CCcccccEEEec
Q 003065 256 ELPAELGNLTLLQEFDISSNQMYGKLP----EEIGNLKNLTVFQCFKNN---FSGEFPSGF-------GDMRKLFAFSIY 321 (851)
Q Consensus 256 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~l~~N~---l~~~~p~~~-------~~l~~L~~L~l~ 321 (851)
.++..+..+++|++|+|++|++++..+ ..+..+++|++|++++|. +++.+|..+ ..+++|++|+++
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455566667777777777777765433 335567777777777753 333334333 345555555555
Q ss_pred cCcCCC----CCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCcc
Q 003065 322 GNRFSG----PFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHL 397 (851)
Q Consensus 322 ~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l 397 (851)
+|++++ .+|..+..+++|+.|+|++|.+++..+..+... +..+ ..|++.+. .
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~l--~~~~~~~~-------~------------- 158 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQEL--AVNKKAKN-------A------------- 158 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHHH--HHHHHHHT-------C-------------
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHHH--hhhhhccc-------C-------------
Confidence 555554 234444455555555555555543322222211 0000 00000000 0
Q ss_pred ccccCCcccCccccceEEecCCcCC-CCCC---cccccCCCCCeEecCCCcce--e---eCCcccccCCCCcEEeccCcc
Q 003065 398 SGKIPDGLWALPNVGMLDFGDNDFT-GGIS---PLIGLSTSLSQLVLQNNRFS--G---ELPSELGRLTNLERLILTNNN 468 (851)
Q Consensus 398 ~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~---~~~~~~~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~ 468 (851)
++|++|++++|+++ +..+ ..+..+++|+.|+|++|+++ | ..|..+..+++|+.|+|++|.
T Consensus 159 -----------~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~ 227 (386)
T 2ca6_A 159 -----------PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT 227 (386)
T ss_dssp -----------CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSC
T ss_pred -----------CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCC
Confidence 45555555555554 2222 23445666777777777765 2 344467777888888888888
Q ss_pred cc----CCCccccccCCcccEEEecCCcccCC----CCCCc--ccccccceeeccCccccc----ccCCCc-cccccCCe
Q 003065 469 FS----GKIPSALGALRQLSSLHLEENALTGS----IPNEM--GDCARIVDLNLARNSLSG----NIPRSL-SLLSSLNA 533 (851)
Q Consensus 469 l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~ 533 (851)
++ +.+|..+..+++|+.|+|++|++++. +|..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.
T Consensus 228 l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~ 307 (386)
T 2ca6_A 228 FTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLF 307 (386)
T ss_dssp CHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCE
T ss_pred CCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceE
Confidence 75 56677778888888888888888755 45555 347888999999999887 477777 66899999
Q ss_pred EeCCCCccccccC
Q 003065 534 LNLSGNKLTGSIP 546 (851)
Q Consensus 534 L~Ls~N~l~g~ip 546 (851)
|+|++|++++..|
T Consensus 308 L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 308 LELNGNRFSEEDD 320 (386)
T ss_dssp EECTTSBSCTTSH
T ss_pred EEccCCcCCcchh
Confidence 9999999997664
No 343
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.89 E-value=6.4e-23 Score=219.35 Aligned_cols=148 Identities=26% Similarity=0.383 Sum_probs=129.8
Q ss_pred HcCCccC-CeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHH-HcCCCCccccEEEEEEe----CCeeEE
Q 003065 675 ICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEIL-GKIRHRNILKLYACLLK----GGSSFL 748 (851)
Q Consensus 675 ~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~l 748 (851)
+.+|.+. +.||+|+||.||+|.+..+++.||||++... ..+.+|++++ +..+||||+++++++.. ....|+
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 4577776 7899999999999999999999999998543 4567899988 56699999999999876 677899
Q ss_pred EEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECC---CCceEEeeecC
Q 003065 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGV 825 (851)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl 825 (851)
||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+
T Consensus 93 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 99999999999999864 2346899999999999999999999 789999999999999997 78899999999
Q ss_pred ccccCC
Q 003065 826 AKIAEN 831 (851)
Q Consensus 826 a~~~~~ 831 (851)
|+....
T Consensus 167 a~~~~~ 172 (299)
T 3m2w_A 167 AKETTG 172 (299)
T ss_dssp CEECTT
T ss_pred cccccc
Confidence 986654
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=6e-23 Score=220.19 Aligned_cols=194 Identities=22% Similarity=0.300 Sum_probs=108.9
Q ss_pred ccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccce
Q 003065 93 ISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVS 172 (851)
Q Consensus 93 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 172 (851)
+.++++|++|++++|.++. +| .+..+++|++|+|++|.+++.++ +..+++|++|+|++|.+++. ..+..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 3456667777777777663 44 46667777777777777666555 66666677777776666542 24556666666
Q ss_pred eecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccC
Q 003065 173 LSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN 252 (851)
Q Consensus 173 L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~ 252 (851)
|++++|.+. .+|. +..+++|++|++++|++++..+ +..+++|++|++++|++++..+ +..+++|++|++++|+
T Consensus 112 L~l~~n~l~--~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 112 LDLTSTQIT--DVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EECTTSCCC--CCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EECCCCCCC--Cchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 666666654 2332 5556666666666666654322 5555555555555555553222 5555555555555555
Q ss_pred ccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccC
Q 003065 253 LTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFS 302 (851)
Q Consensus 253 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 302 (851)
+++..+ +..+++|++|++++|++++.. .+..+++|+.|++++|.++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 553222 444555555555555554332 1444555555555555544
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=1.2e-23 Score=241.97 Aligned_cols=208 Identities=22% Similarity=0.346 Sum_probs=135.1
Q ss_pred CCCCCCCCCCCCc-----cccee-EecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCC
Q 003065 49 VLDSWKESADSPC-----GFSGI-TCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSN 122 (851)
Q Consensus 49 ~l~sW~~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 122 (851)
.+.+|..+ .++| .|.|+ .|.. ++++.|++++++|++ +|+.+. ++|++|+|++|+|+ .+| ..+++
T Consensus 32 ~l~~W~~~-~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~ 101 (571)
T 3cvr_A 32 AWDKWEKQ-ALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPAS 101 (571)
T ss_dssp HHHHHHTT-CCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTT
T ss_pred HHHHHhcc-CCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCC
Confidence 35567654 5678 79999 7863 378889999988887 777664 78888888888888 677 45688
Q ss_pred CceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEeccc
Q 003065 123 LKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAH 202 (851)
Q Consensus 123 L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~ 202 (851)
|++|+|++|.|++.++ +.. +|++|+|++|.+++ +|. .+++|++|+|++|.++ .+|. .+++|++|+|++
T Consensus 102 L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~--~lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 102 LEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT--MLPE---LPTSLEVLSVRN 169 (571)
T ss_dssp CCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS--CCCC---CCTTCCEEECCS
T ss_pred CCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC--cCCC---cCCCcCEEECCC
Confidence 8888888888887444 554 78888888888775 444 5677777777777775 3554 456677777777
Q ss_pred ccccccCCcccccccccCccccccccccccccccccCCCcc-------cEEEeeccCccCcCCcCcCCCCcccEEecccc
Q 003065 203 CNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKL-------WKIELYANNLTGELPAELGNLTLLQEFDISSN 275 (851)
Q Consensus 203 n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 275 (851)
|+|++ +|. |. ++|++|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 170 N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 170 NQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp SCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred CCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCC
Confidence 77764 454 44 56666666666666 4444 332 44 55555555555 34444444555555555555
Q ss_pred cccCCCCccccC
Q 003065 276 QMYGKLPEEIGN 287 (851)
Q Consensus 276 ~l~~~~p~~l~~ 287 (851)
.+++.+|..+..
T Consensus 241 ~l~~~~p~~l~~ 252 (571)
T 3cvr_A 241 PLSSRIRESLSQ 252 (571)
T ss_dssp SCCHHHHHHHHH
T ss_pred cCCCcCHHHHHH
Confidence 555444444443
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3.7e-23 Score=221.89 Aligned_cols=210 Identities=20% Similarity=0.293 Sum_probs=136.1
Q ss_pred CcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccc
Q 003065 99 LTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (851)
Q Consensus 99 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 178 (851)
+..+.+..+.+++.+ .+.++++|++|++++|.+... +.+..+++|++|+|++|.+++..+ +..+++|++|++++|
T Consensus 21 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-hhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCC
Confidence 344456666665433 356788899999999988764 468888888888888888885544 778888888888888
Q ss_pred cCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCC
Q 003065 179 VYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP 258 (851)
Q Consensus 179 ~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 258 (851)
.+. .+| .+..+++|++|++++|++++. + .+..+++|++|++++|++++..+ +..+++|++|++++|++++..+
T Consensus 96 ~l~--~~~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 96 PLK--NVS-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CCS--CCG-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred cCC--Cch-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 876 333 577777777888777777743 3 26677777777777777764433 6666666666666666664322
Q ss_pred cCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCC
Q 003065 259 AELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS 326 (851)
Q Consensus 259 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 326 (851)
+..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+++
T Consensus 169 --l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 169 --LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred --hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 5566666666666666654322 5555556666666655553321 444444444444444443
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.5e-22 Score=221.32 Aligned_cols=243 Identities=18% Similarity=0.147 Sum_probs=133.6
Q ss_pred cccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCC-
Q 003065 61 CGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD- 139 (851)
Q Consensus 61 c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~- 139 (851)
|+|..|.|+. ++|+ +||..+ .+++++|+|++|+|+..-+.+|.++++|++|+|++|++.+.+|.
T Consensus 9 C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 7787777753 3444 456655 35778888888888743334677888888888888877665443
Q ss_pred -CCCCCCCCe-EeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccccc
Q 003065 140 -LSALKNLEI-FDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELR 217 (851)
Q Consensus 140 -l~~l~~L~~-L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 217 (851)
|.++++|+. ++++.|+++...|..|.++++|++|++++|.+. +..+..+....
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-------------------------~~~~~~~~~~~ 128 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-------------------------HLPDVHKIHSL 128 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCS-------------------------SCCCCTTCCBS
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccc-------------------------cCCchhhcccc
Confidence 667766654 455556666555555555555555555555554 33333333333
Q ss_pred ccCcccccc-ccccccccccccCCC-cccEEEeeccCccCcCCcCcCCCCcccEEeccc-ccccCCCCccccCcCCccEE
Q 003065 218 ELGTLDICR-NKISGEFPRSIRKLQ-KLWKIELYANNLTGELPAELGNLTLLQEFDISS-NQMYGKLPEEIGNLKNLTVF 294 (851)
Q Consensus 218 ~L~~L~L~~-N~i~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L 294 (851)
++..|++.+ |++....+..|..+. .++.|+|++|+|+. +|......++|++|++++ |.++...++.|.++++|++|
T Consensus 129 ~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~L 207 (350)
T 4ay9_X 129 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVIL 207 (350)
T ss_dssp SCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEE
T ss_pred hhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchh
Confidence 344444432 334333333444432 35555555555553 333333445566666653 44443333345666666666
Q ss_pred EccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCc
Q 003065 295 QCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQ 348 (851)
Q Consensus 295 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 348 (851)
++++|+|+...+..|.++++|+.+++ +.++ .+| .+..+++|+.++++++.
T Consensus 208 dLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 208 DISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp ECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred hcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 66666666433334444444433332 2222 444 36677778888776543
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=4.8e-22 Score=200.36 Aligned_cols=185 Identities=19% Similarity=0.196 Sum_probs=112.4
Q ss_pred CCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCC
Q 003065 59 SPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP 138 (851)
Q Consensus 59 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 138 (851)
+.|.|.+|.|+... ++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|++++.++
T Consensus 5 C~C~~~~v~c~~~~------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 5 CSCSGTTVECYSQG------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp CEEETTEEECCSSC------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEECCCEEEecCCC------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 45899999997532 22 234333 3578888888888876555667777888888888887776665
Q ss_pred C-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCccccccc
Q 003065 139 D-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELR 217 (851)
Q Consensus 139 ~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 217 (851)
. +..+++|++|+|++|.+++..+..|.++++|++|++++|.+ ++..+..|.+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l-------------------------~~~~~~~~~~l~ 124 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL-------------------------QSLPDGVFDKLT 124 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-------------------------CCCCTTTTTTCT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcC-------------------------cccCHhHhccCC
Confidence 5 56777777777777777654444445555555555555544 433333444455
Q ss_pred ccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCC
Q 003065 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKN 290 (851)
Q Consensus 218 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 290 (851)
+|++|++++|++++..+..|..+++|++|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 125 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 125 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 55555555555554444445555555555555555442 2345666666666666666666665543
No 349
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.87 E-value=7.5e-23 Score=228.91 Aligned_cols=165 Identities=18% Similarity=0.202 Sum_probs=125.7
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc-----ccHHHHHHHHHHHHcCCC-Ccc----------cc-----
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRH-RNI----------LK----- 735 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h-~ni----------v~----- 735 (851)
.|...+.||+|+||.||+|++..+++.||||++... ...+.+.+|+.+++.++| ++. +.
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 467788999999999999999999999999998633 224678899999999977 211 11
Q ss_pred ------EEEEEEe-----CCeeEEEEeccCCCCHHHHHHHhh--hCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEE
Q 003065 736 ------LYACLLK-----GGSSFLVLEYMPNGNLFQALHKRV--KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIH 802 (851)
Q Consensus 736 ------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 802 (851)
+..++.. ....+++|+++ +++|.+++.... ......+++..++.++.|+++||+||| +++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 1111111 22357778766 689999886432 122335678888999999999999999 789999
Q ss_pred eCCCCCCEEECCCCceEEeeecCccccCCCCCcccccccccccccccCC
Q 003065 803 RDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPG 851 (851)
Q Consensus 803 rDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~Y~APE 851 (851)
|||||+|||++.++.+||+|||+|+..... ....+| +.|+|||
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE 277 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPE 277 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCch
Confidence 999999999999999999999999865433 233568 9999998
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.9e-21 Score=212.63 Aligned_cols=241 Identities=14% Similarity=0.048 Sum_probs=154.4
Q ss_pred ceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCc-ccccCCCCCCe-Eecc
Q 003065 124 KVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP-ESIGNLKNLTY-LFLA 201 (851)
Q Consensus 124 ~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~-L~L~ 201 (851)
++++.++++++..|.++ .+++++|+|++|+|+...+..|.++++|++|+|++|++. ..+| ..|.+++++++ +.++
T Consensus 12 ~~v~C~~~~Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~-~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVL-EVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTC-CEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCC-CccChhHhhcchhhhhhhccc
Confidence 34555555555544434 245666666666666444445666666666666666654 2333 34667777665 5666
Q ss_pred cccccccCCcccccccccCccccccccccccccccccCCCcccEEEeec-cCccCcCCcCcCCCC-cccEEecccccccC
Q 003065 202 HCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYA-NNLTGELPAELGNLT-LLQEFDISSNQMYG 279 (851)
Q Consensus 202 ~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 279 (851)
.|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 7888877778888888888888888888876666777777788888865 566655555666654 5778888888887
Q ss_pred CCCccccCcCCccEEEccC-CccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhh
Q 003065 280 KLPEEIGNLKNLTVFQCFK-NNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLC 358 (851)
Q Consensus 280 ~~p~~l~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 358 (851)
.+|.......+|+.|++++ |.++...+..|..+++|++|++++|+|+...+..+.++++|+.+++. .+
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l--------- 236 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NL--------- 236 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TC---------
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--Cc---------
Confidence 4455444556788888875 44543333457778888888888888775555455554444443321 12
Q ss_pred hhcchHHHHhccCCccccccccccCccccceeccccCc
Q 003065 359 EKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNH 396 (851)
Q Consensus 359 ~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~ 396 (851)
..+| .+.++++|+.++++++.
T Consensus 237 ----------------~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 237 ----------------KKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp ----------------CCCC-CTTTCCSCCEEECSCHH
T ss_pred ----------------CcCC-CchhCcChhhCcCCCCc
Confidence 2344 36677888888887654
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.4e-20 Score=189.67 Aligned_cols=179 Identities=22% Similarity=0.240 Sum_probs=89.1
Q ss_pred ceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeec
Q 003065 171 VSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYA 250 (851)
Q Consensus 171 ~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~ 250 (851)
+.++++++.+. ++|..+ .++|++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~--~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT--SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS--SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc--CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 34555555554 444433 24566666666666544444455555555555555555544444445555555555555
Q ss_pred cCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCC
Q 003065 251 NNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP 330 (851)
Q Consensus 251 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 330 (851)
|++++..+..|..+++|++|++++|++++..+ ..|..+++|++|++++|++++..+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------------------------~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPD------------------------GVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT------------------------TTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCH------------------------hHhccCCcCCEEECCCCccceeCH
Confidence 55554433444445555555555555544333 344444555555555555554444
Q ss_pred CccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCc
Q 003065 331 ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADC 384 (851)
Q Consensus 331 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l 384 (851)
..+..+++|+.|++++|.+.+. .+.++.+.+..|+++|.+|.+++.+
T Consensus 142 ~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp TTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred HHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeeccCccc
Confidence 4455555555555555554422 2234444444444444444444443
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=5.2e-22 Score=209.41 Aligned_cols=133 Identities=17% Similarity=0.194 Sum_probs=108.5
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccc--------------------cHHHHHHHHHHHHcCCCCccccE
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------------------GVKVFAAEMEILGKIRHRNILKL 736 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------------------~~~~~~~E~~~l~~l~h~niv~l 736 (851)
.|.+.+.||+|+||.||+|.+ .+++.||||++.... ....+.+|++++++++| +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence 356679999999999999999 889999999985421 24568899999999994 555
Q ss_pred EEEEEeCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEEECCCC
Q 003065 737 YACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (851)
Q Consensus 737 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NILl~~~~ 816 (851)
.+++.. +..|+||||++|++|.+ +.. .....++.|++.|++||| +.+|+||||||+|||++ ++
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TT
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CC
Confidence 554433 45699999999999977 311 123468999999999999 78999999999999999 99
Q ss_pred ceEEeeecCccccC
Q 003065 817 EPKIADFGVAKIAE 830 (851)
Q Consensus 817 ~~kl~DFGla~~~~ 830 (851)
.+||+|||+|+...
T Consensus 230 ~vkl~DFG~a~~~~ 243 (282)
T 1zar_A 230 GIWIIDFPQSVEVG 243 (282)
T ss_dssp EEEECCCTTCEETT
T ss_pred cEEEEECCCCeECC
Confidence 99999999997554
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=3.3e-21 Score=195.78 Aligned_cols=140 Identities=23% Similarity=0.270 Sum_probs=99.8
Q ss_pred CCCeEecCCCcceeeCC-cccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeec
Q 003065 434 SLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (851)
Q Consensus 434 ~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (851)
.++.|+|++|+|++..| ..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 34566666666665543 34666777777777777777666666777777777777777777666666777777777777
Q ss_pred cCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccc
Q 003065 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
++|+|++..|..|..+++|+.|+|++|++++..|..+..+ .|+.|++++|+|.|.++..+.
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l 174 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWL 174 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHH
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHH
Confidence 7777777777777777777777777777776667777777 778888888888888776544
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=9e-21 Score=218.13 Aligned_cols=188 Identities=22% Similarity=0.308 Sum_probs=113.3
Q ss_pred CCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecc
Q 003065 122 NLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLA 201 (851)
Q Consensus 122 ~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~ 201 (851)
+|++|+|++|.+++.++.+. ++|++|+|++|.|+ .+| ..+++|++|+|++|.+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l--------------------- 112 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRL--------------------- 112 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCC---------------------
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCC---------------------
Confidence 67777777777766444342 56666666666665 333 2344455555555544
Q ss_pred cccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCC
Q 003065 202 HCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKL 281 (851)
Q Consensus 202 ~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 281 (851)
++ +|. +.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|++++ +
T Consensus 113 ----~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 113 ----ST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp ----SC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred ----CC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-c
Confidence 43 333 332 45555555555543 333 34555555555555553 343 34566666666666664 4
Q ss_pred CccccCcCCccEEEccCCccCCCCCCCCCCcccc-------cEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCc
Q 003065 282 PEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKL-------FAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (851)
Q Consensus 282 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 354 (851)
|. |. ++|+.|++++|+|+ .+|. |.. +| +.|++++|+|+ .+|..+..+++|+.|+|++|++++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 44 44 56666666666666 4444 443 55 88888888888 578777889999999999999998888
Q ss_pred hhhhhhc
Q 003065 355 KYLCEKR 361 (851)
Q Consensus 355 ~~~~~~~ 361 (851)
..++.+.
T Consensus 248 ~~l~~l~ 254 (571)
T 3cvr_A 248 ESLSQQT 254 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 8776654
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=2.4e-22 Score=239.95 Aligned_cols=230 Identities=15% Similarity=0.166 Sum_probs=110.2
Q ss_pred CchhhHHHHHHHHHhcCC-CCCCCCCCCCCCCCCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCC
Q 003065 28 SLNVETQALIQFKSKLKD-PHGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPF 106 (851)
Q Consensus 28 ~~~~~~~aLl~fk~~~~~-~~~~l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~ 106 (851)
....++++|+++..+... .+..-..|....+.++.|.+++++. ++|+.++|.++++.+ ++..+. +.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l-----~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALL-----QHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHh-----hcCccCc
Confidence 456789999999887743 2333457766656668999998875 589999999999886 344333 3344444
Q ss_pred CcccC---------ccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeeccc
Q 003065 107 NVLSG---------KLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGD 177 (851)
Q Consensus 107 n~l~~---------~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 177 (851)
|.+++ ..|..|..+++|++|+|++|.+...++.+..+++|++|+|++|.|+ .+|..|.++++|++|+|++
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTT
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcC
Confidence 44332 3466677777777777777777755555667777777777777777 6677777777777777777
Q ss_pred ccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCc-ccEEEeeccCccCc
Q 003065 178 NVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQK-LWKIELYANNLTGE 256 (851)
Q Consensus 178 N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~-L~~L~L~~N~l~~~ 256 (851)
|.++ .+|..|++|++|++|+|++|.|+ .+|..|+++++|++|+|++|+|++.+|..+..+.. +..|+|++|.+++.
T Consensus 280 N~l~--~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 280 NRLT--SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp SCCS--SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CcCC--ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCc
Confidence 7776 56777777777777777777776 56666777777777777777777777666654322 22356666666665
Q ss_pred CCcCcCCCCcccEEecccc
Q 003065 257 LPAELGNLTLLQEFDISSN 275 (851)
Q Consensus 257 ~p~~~~~l~~L~~L~Ls~N 275 (851)
+|.. |+.|+++.|
T Consensus 357 ~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 357 LPHE------RRFIEINTD 369 (727)
T ss_dssp CCCC---------------
T ss_pred Cccc------cceeEeecc
Confidence 5543 344555555
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=8.7e-21 Score=192.69 Aligned_cols=141 Identities=25% Similarity=0.301 Sum_probs=96.7
Q ss_pred CCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeec
Q 003065 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (851)
Q Consensus 433 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (851)
++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45666666666666555556666666666666666666666666667777777777777776555555666777777777
Q ss_pred cCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccc
Q 003065 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
++|+|++..|..|..+++|+.|+|++|+|++..|..+..+ .|+.|++++|+|.|.++..|.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l 173 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWL 173 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHH
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHH
Confidence 7777776667777777777777777777775555566666 677778888888777765554
No 357
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=2.2e-20 Score=191.06 Aligned_cols=162 Identities=23% Similarity=0.235 Sum_probs=125.7
Q ss_pred CCCCCCCCcccceeEecCCCCceEEEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCc
Q 003065 53 WKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNA 132 (851)
Q Consensus 53 W~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~ 132 (851)
|... .+.|+|.+|.|+... ++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+
T Consensus 12 ~~~~-~~~Cs~~~v~c~~~~------------l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 12 ACPS-QCSCSGTTVDCRSKR------------HA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCT-TCEEETTEEECTTSC------------CS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCC-CCEEeCCEeEccCCC------------cC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 4433 567999999997432 22 4555444 889999999999998888899999999999999999
Q ss_pred ccCCCCC-CCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCc
Q 003065 133 MVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPE 211 (851)
Q Consensus 133 l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 211 (851)
+.+.++. +..+++|++|+|++|.+++..+..|..+++|++|+|++|++. .+|..+..+++|++|+|++|+|++..+.
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 9877766 788999999999999998777777778888888888888776 6777777777777777777777765556
Q ss_pred ccccccccCcccccccccccc
Q 003065 212 SISELRELGTLDICRNKISGE 232 (851)
Q Consensus 212 ~~~~l~~L~~L~L~~N~i~~~ 232 (851)
.|..+++|++|+|++|.+...
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTT
T ss_pred HHhCCCCCCEEEeeCCCccCC
Confidence 666777777777777766543
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=190.79 Aligned_cols=157 Identities=20% Similarity=0.262 Sum_probs=144.1
Q ss_pred cceeccccCccccccCCcccCccccceEEecCCcCCCCCC-cccccCCCCCeEecCCCcceeeCCcccccCCCCcEEecc
Q 003065 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (851)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 465 (851)
-+.+++++|.++ .+|..+ .+.+++|+|++|++++.++ ..|..+++|+.|+|++|+|++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 368999999998 577765 3467899999999998855 568999999999999999998888899999999999999
Q ss_pred CccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCcccccc
Q 003065 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSI 545 (851)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i 545 (851)
+|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred C
Q 003065 546 P 546 (851)
Q Consensus 546 p 546 (851)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 5
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1e-20 Score=220.26 Aligned_cols=197 Identities=22% Similarity=0.285 Sum_probs=124.0
Q ss_pred cCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeeccc
Q 003065 98 SLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGD 177 (851)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 177 (851)
.+..+.++.+.+++.++ +..|++|+.|+|++|.+... +.+..+++|+.|+|++|.+++..| +..+++|++|+|++
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 34445555555554333 45566666666666666543 346666666666666666665443 66666666666666
Q ss_pred ccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcC
Q 003065 178 NVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGEL 257 (851)
Q Consensus 178 N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 257 (851)
|.+. .+| .+..+++|++|+|++|++++. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++..
T Consensus 97 N~l~--~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 97 NKIK--DLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SCCC--CCT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCC--CCh-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 6665 233 566677777777777777642 3466677777777777777654 45667777777777777777554
Q ss_pred CcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCC
Q 003065 258 PAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFG 310 (851)
Q Consensus 258 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~ 310 (851)
| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.....+.
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 4 66777777777777777643 3466777777777777777654333333
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=6.2e-21 Score=202.67 Aligned_cols=172 Identities=26% Similarity=0.356 Sum_probs=90.9
Q ss_pred ccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCe
Q 003065 118 SNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTY 197 (851)
Q Consensus 118 ~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 197 (851)
..+++|++|++++|.+... +.+..+++|++|+|++|.+++..+ +.++++|++|++++|.+. .+ +.+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~--~~-~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK--DL-SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC--CG-GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC--CC-hhhccCCCCCE
Confidence 3444555555555554433 334455555555555555554332 455555555555555554 22 23555556666
Q ss_pred EecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccc
Q 003065 198 LFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQM 277 (851)
Q Consensus 198 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 277 (851)
|++++|++++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++++..| +..+++|++|++++|++
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 66666655532 3455555566666666655543 345555666666666666654333 55566666666666666
Q ss_pred cCCCCccccCcCCccEEEccCCccCC
Q 003065 278 YGKLPEEIGNLKNLTVFQCFKNNFSG 303 (851)
Q Consensus 278 ~~~~p~~l~~l~~L~~L~l~~N~l~~ 303 (851)
++ +| .+..+++|+.|++++|+++.
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccC
Confidence 53 22 25556666666666665553
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.2e-20 Score=207.22 Aligned_cols=182 Identities=25% Similarity=0.244 Sum_probs=157.6
Q ss_pred cceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccc-cCCCCCeEecCCCcceeeCCcccccCCCCcEEecc
Q 003065 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIG-LSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (851)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 465 (851)
-+.+++++|+++ .+|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..|..+++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 368999999998 5777553 4689999999999998888887 89999999999999998888899999999999999
Q ss_pred CccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCc---cccccCCeEeCCCCccc
Q 003065 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSL---SLLSSLNALNLSGNKLT 542 (851)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~ 542 (851)
+|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|||++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998888889999999999999999998889999999999999999999996544445 67999999999999999
Q ss_pred cccCcccccc-c--ceEEeCcCCcccccCCcc
Q 003065 543 GSIPDNLMKL-K--LSSIDLSENQLSGSVPLD 571 (851)
Q Consensus 543 g~ip~~l~~l-~--L~~l~ls~N~l~~~~p~~ 571 (851)
+..+..+..+ . ++.|++++|+|.|.+...
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~ 208 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKLY 208 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCcH
Confidence 5444556655 3 588999999999998743
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=8.3e-20 Score=185.44 Aligned_cols=153 Identities=20% Similarity=0.218 Sum_probs=142.4
Q ss_pred ceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCc
Q 003065 388 QRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNN 467 (851)
Q Consensus 388 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 467 (851)
+.+++++|+++ .+|..+. ++++.|++++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67899999998 6777654 78999999999999988889999999999999999999999999999999999999999
Q ss_pred cccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCcccc
Q 003065 468 NFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTG 543 (851)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 543 (851)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9998777889999999999999999999999999999999999999999998888889999999999999999975
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=3.7e-20 Score=215.51 Aligned_cols=196 Identities=24% Similarity=0.320 Sum_probs=159.1
Q ss_pred EEecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCccc
Q 003065 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYF 156 (851)
Q Consensus 77 ~l~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l 156 (851)
.+.+..+.+.+.++ +..|++|+.|+|++|.++. +| .|+.|++|+.|+|++|++.+.++ +..+++|+.|+|++|.+
T Consensus 25 ~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l 99 (605)
T 1m9s_A 25 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKI 99 (605)
T ss_dssp HHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCC
T ss_pred HHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCC
Confidence 34445555554332 5678889999999999874 44 58899999999999999988766 88999999999999998
Q ss_pred CCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCcccccccccccccccc
Q 003065 157 TGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRS 236 (851)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~ 236 (851)
++. ..+..+++|++|+|++|.+. .+ +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|
T Consensus 100 ~~l--~~l~~l~~L~~L~Ls~N~l~--~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 100 KDL--SSLKDLKKLKSLSLEHNGIS--DI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCC--TTSTTCTTCCEEECTTSCCC--CC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCC--hhhccCCCCCEEEecCCCCC--CC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 853 37888999999999999987 34 4688899999999999999865 678899999999999999997766
Q ss_pred ccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCc
Q 003065 237 IRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNL 288 (851)
Q Consensus 237 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 288 (851)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.....+..+
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 89999999999999999864 468899999999999999986544444333
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=4.3e-20 Score=196.12 Aligned_cols=186 Identities=25% Similarity=0.354 Sum_probs=156.7
Q ss_pred ecccCCcceecCccccCCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCC
Q 003065 79 SFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTG 158 (851)
Q Consensus 79 ~l~~~~l~g~i~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~ 158 (851)
.+....+++.+ .+..+++|++|++++|.++. +| .++.+++|++|+|++|++++.++ +..+++|++|+|++|.+++
T Consensus 30 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~ 104 (291)
T 1h6t_A 30 NLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD 104 (291)
T ss_dssp HTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC
T ss_pred HhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC
Confidence 34444444332 34578899999999999974 44 48899999999999999998776 9999999999999999986
Q ss_pred CCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCcccccccccccccccccc
Q 003065 159 RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIR 238 (851)
Q Consensus 159 ~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~ 238 (851)
+ ..+..+++|++|++++|.+. .+ +.+..+++|++|++++|++++. ..+..+++|++|++++|++++..| +.
T Consensus 105 -~-~~l~~l~~L~~L~L~~n~i~--~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~ 175 (291)
T 1h6t_A 105 -L-SSLKDLKKLKSLSLEHNGIS--DI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LA 175 (291)
T ss_dssp -G-GGGTTCTTCCEEECTTSCCC--CC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred -C-hhhccCCCCCEEECCCCcCC--CC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hc
Confidence 3 34899999999999999997 34 5688999999999999999865 678999999999999999997655 89
Q ss_pred CCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCC
Q 003065 239 KLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (851)
Q Consensus 239 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (851)
.+++|++|++++|.+++ +| .+..+++|+.|++++|+++..
T Consensus 176 ~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 176 GLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp TCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 99999999999999995 44 488999999999999999853
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.4e-19 Score=182.18 Aligned_cols=136 Identities=25% Similarity=0.308 Sum_probs=73.5
Q ss_pred CCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeec
Q 003065 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (851)
Q Consensus 433 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (851)
++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 34444455555554444445555555555555555554444444555555555555555555444444555555555555
Q ss_pred cCcccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCC
Q 003065 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVP 569 (851)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p 569 (851)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+ .|+.|++++|+|.|.++
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 555555 455555555566666666666654333445555 56666666666666554
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=1.9e-21 Score=225.00 Aligned_cols=202 Identities=20% Similarity=0.211 Sum_probs=117.7
Q ss_pred CCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccce
Q 003065 310 GDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQR 389 (851)
Q Consensus 310 ~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~ 389 (851)
...++|+.|+|++|+++ .+|..++.+++|+.|++++|......| ..+..++..+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~-----------~ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTII-----------LLMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHH-----------HHHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHH-----------HHHHhcccccCCHHHHHHHHhccc
Confidence 34455555555555554 455555555555555554443110000 001112345666777777777777
Q ss_pred ec-cccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCcc
Q 003065 390 LR-ISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNN 468 (851)
Q Consensus 390 L~-Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 468 (851)
|+ ++.|.+. +|..+.+++|.+++..+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|.
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 77 6665543 33444555555443222 136666666666664 454 6666666777777766
Q ss_pred ccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCccccccc-CCCccccccCCeEeCCCCcccccc
Q 003065 469 FSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNI-PRSLSLLSSLNALNLSGNKLTGSI 545 (851)
Q Consensus 469 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~i 545 (851)
|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..++.+++|+.|+|++|+|++.+
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 66 556666666677777777776664 45 6666667777777777776665 666677777777777777776443
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=3.7e-21 Score=222.57 Aligned_cols=217 Identities=18% Similarity=0.130 Sum_probs=173.2
Q ss_pred cCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHH
Q 003065 286 GNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLN 365 (851)
Q Consensus 286 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~ 365 (851)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|......| . .+..+.+.+..|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~----------~-ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTII----------L-LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHH----------H-HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHH----------H-HHHhcccccCCHHHHHHHHhccc
Confidence 56889999999999998 789999999999999997765311111 1 11223345577888888888888
Q ss_pred HH-hccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCc
Q 003065 366 LL-ALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNR 444 (851)
Q Consensus 366 l~-l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~ 444 (851)
|+ +..|. +.+|+.+.+++|.+++..+ ..|+.|+|++|+|++. |. ++.+++|+.|+|++|+
T Consensus 414 L~~l~~n~-----------~~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAY-----------LDDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHH-----------HHHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcc-----------cchhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccc
Confidence 87 44432 2467788888888875433 2488899999999885 44 8889999999999999
Q ss_pred ceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCC-CCCcccccccceeeccCcccccccCC
Q 003065 445 FSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSI-PNEMGDCARIVDLNLARNSLSGNIPR 523 (851)
Q Consensus 445 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 523 (851)
|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..++.+++|+.|+|++|.|++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 98 889999999999999999999996 56 8999999999999999999887 99999999999999999999977664
Q ss_pred C---ccccccCCeEeC
Q 003065 524 S---LSLLSSLNALNL 536 (851)
Q Consensus 524 ~---~~~l~~L~~L~L 536 (851)
. +..+++|+.||+
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 3 234788988875
No 368
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.4e-19 Score=198.65 Aligned_cols=158 Identities=24% Similarity=0.169 Sum_probs=137.3
Q ss_pred ccceeccccCccccccCCccc-CccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEec
Q 003065 386 TIQRLRISDNHLSGKIPDGLW-ALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLIL 464 (851)
Q Consensus 386 ~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 464 (851)
.++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 478899999999987777777 8999999999999999888888999999999999999999888888999999999999
Q ss_pred cCccccCCCccccccCCcccEEEecCCcccCCCCCCc---ccccccceeeccCcccccccCCCcccccc--CCeEeCCCC
Q 003065 465 TNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEM---GDCARIVDLNLARNSLSGNIPRSLSLLSS--LNALNLSGN 539 (851)
Q Consensus 465 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N 539 (851)
++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 9999998888999999999999999999986555555 57899999999999999766667788877 488999999
Q ss_pred cccc
Q 003065 540 KLTG 543 (851)
Q Consensus 540 ~l~g 543 (851)
++..
T Consensus 200 ~~~C 203 (361)
T 2xot_A 200 PLEC 203 (361)
T ss_dssp CEEC
T ss_pred CccC
Confidence 9974
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=4.4e-19 Score=176.00 Aligned_cols=130 Identities=25% Similarity=0.330 Sum_probs=60.7
Q ss_pred ceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCc-ccccCCCCcEEeccCccccCCCccccccCCcccEEEecC
Q 003065 412 GMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEE 490 (851)
Q Consensus 412 ~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 490 (851)
+.+++++|+++..+. .+. .+|+.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~~ip~-~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPR-DIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCS-CCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCcc-CCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 455555555543322 111 1455555555555433332 244445555555555555444444444444455555555
Q ss_pred CcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccc
Q 003065 491 NALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (851)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 544 (851)
|+|++..|..|+.+++|+.|+|++|+|++.+|..+..+++|+.|+|++|++++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 544444444444444444444444444444444444444444444444444443
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.9e-19 Score=188.08 Aligned_cols=171 Identities=23% Similarity=0.286 Sum_probs=116.6
Q ss_pred CCccCcEEeCCCCcccCccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccccceee
Q 003065 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (851)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 174 (851)
.+..++.++++.|.+++ ++ .+..+++|++|++++|.++.. +.+..+++|++|+|++|.+++..+ +.++++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSL-AGMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccc-hHHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 45566667777777764 33 567777777777777777654 367777777777777777775444 67777777777
Q ss_pred cccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCcc
Q 003065 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (851)
Q Consensus 175 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 254 (851)
+++|++. .+|.... ++|++|+|++|++++. +.+..+++|++|++++|+|++. + .+..+++|++|+|++|+++
T Consensus 92 L~~N~l~--~l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 92 VNRNRLK--NLNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCS--CCTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred CCCCccC--CcCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 7777775 3443322 7777777777777743 3467777777777777777753 3 5677777777777777777
Q ss_pred CcCCcCcCCCCcccEEecccccccCC
Q 003065 255 GELPAELGNLTLLQEFDISSNQMYGK 280 (851)
Q Consensus 255 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (851)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 54 5566777777777777777644
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=9.6e-19 Score=182.73 Aligned_cols=170 Identities=21% Similarity=0.282 Sum_probs=105.8
Q ss_pred hhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeE
Q 003065 359 EKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQL 438 (851)
Q Consensus 359 ~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L 438 (851)
.+.++..+.+..|.+.+.. .+..+++|++|++++|+++ .+| .+..+++|+.|++++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4455666666666665433 4666777777777777776 344 56667777777777777776554 6666677777
Q ss_pred ecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccc
Q 003065 439 VLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLS 518 (851)
Q Consensus 439 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 518 (851)
+|++|++++ +|.. .. ++|++|+|++|++++. + .+..+++|+.|+|++|++++. | .++.+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 777777664 3322 22 6666666666666643 2 466666666666666666543 2 4566666666666666666
Q ss_pred cccCCCccccccCCeEeCCCCcccc
Q 003065 519 GNIPRSLSLLSSLNALNLSGNKLTG 543 (851)
Q Consensus 519 ~~~p~~~~~l~~L~~L~Ls~N~l~g 543 (851)
+. ..+..+++|+.|++++|++++
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred ch--HHhccCCCCCEEeCCCCcccC
Confidence 54 455666666666666666653
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.3e-18 Score=173.37 Aligned_cols=157 Identities=16% Similarity=0.230 Sum_probs=125.5
Q ss_pred cccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCC
Q 003065 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (851)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 459 (851)
..+.+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 4477888999999999998 566 68888999999999997653 3467788889999999999887778888888889
Q ss_pred cEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCC
Q 003065 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGN 539 (851)
Q Consensus 460 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (851)
++|++++|.+++..|..+..+++|++|+|++|++.+.+| .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 999999998888778888888888899998887333555 68888888888888888885 44 6788888888888888
Q ss_pred cccc
Q 003065 540 KLTG 543 (851)
Q Consensus 540 ~l~g 543 (851)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 8763
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.5e-18 Score=170.55 Aligned_cols=153 Identities=23% Similarity=0.377 Sum_probs=96.4
Q ss_pred CeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCcc-ccccCCcccEEEecCCcccCCCCCCcccccccceeeccC
Q 003065 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (851)
Q Consensus 436 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (851)
+.+++++|+++ .+|..+.. +|++|++++|++++..+. .|+.+++|++|+|++|+|++..|..|+.+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56667777665 55554433 667777777777655553 366677777777777777666666677777777777777
Q ss_pred cccccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccccCCC-CccccCCCCCCCCc
Q 003065 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLRMGG-DGAFAGNEGLCLDQ 591 (851)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~~~~~-~~~~~gn~~lc~~~ 591 (851)
|+|++..|..|..+++|+.|+|++|+|++.+|..+..+ .|+.|++++|+|.|.++..+..... ...+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 77776666666667777777777777776666666666 6777777777777766654432211 12233444556554
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=1.1e-18 Score=208.23 Aligned_cols=163 Identities=22% Similarity=0.290 Sum_probs=124.7
Q ss_pred cccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCcc
Q 003065 222 LDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNF 301 (851)
Q Consensus 222 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l 301 (851)
++++.|++. ..|..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+++++|++|+|++|+|
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 345556665 66788999999999999999998 77877889999999999999999 8899999999999999999999
Q ss_pred CCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhc-chHHHHhccCCcccccccc
Q 003065 302 SGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKR-KLLNLLALSNNFSGEVPNS 380 (851)
Q Consensus 302 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-~L~~l~l~~n~~~~~~p~~ 380 (851)
+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+.... ....+++.+|.+.+.+|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 9 78999999999999999999998 7788899999999999999999999999887654 3345788899999888864
Q ss_pred ccCccccceeccccC
Q 003065 381 YADCKTIQRLRISDN 395 (851)
Q Consensus 381 ~~~l~~L~~L~Ls~N 395 (851)
|+.|++++|
T Consensus 361 ------l~~l~l~~n 369 (727)
T 4b8c_D 361 ------RRFIEINTD 369 (727)
T ss_dssp ---------------
T ss_pred ------cceeEeecc
Confidence 566777777
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.2e-18 Score=181.45 Aligned_cols=139 Identities=17% Similarity=0.205 Sum_probs=106.9
Q ss_pred CccCCeecccCcEEEEEEEEcCCCcE--EEEEEecccc-c-------------------------HHHHHHHHHHHHcCC
Q 003065 678 LEEDNLIGSGGTGKVYRLDLKKNAGT--VAVKQLWKGD-G-------------------------VKVFAAEMEILGKIR 729 (851)
Q Consensus 678 ~~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~~-~-------------------------~~~~~~E~~~l~~l~ 729 (851)
|++.+.||+|+||.||+|.+..+|+. ||||+++... . ...+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998778888 9999864321 0 135789999999998
Q ss_pred CCcc--ccEEEEEEeCCeeEEEEeccCC-C----CHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEE
Q 003065 730 HRNI--LKLYACLLKGGSSFLVLEYMPN-G----NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIH 802 (851)
Q Consensus 730 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 802 (851)
|+++ +..+++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.|||. +.+|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~--~~givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ--EAELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH--TSCEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH--HCCEEe
Confidence 8864 444443 356899999942 3 66655322 1123456789999999999994 359999
Q ss_pred eCCCCCCEEECCCCceEEeeecCccccCCC
Q 003065 803 RDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (851)
Q Consensus 803 rDlkp~NILl~~~~~~kl~DFGla~~~~~~ 832 (851)
|||||+|||++. .++|+|||+|.....+
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~~~~ 222 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTLRHP 222 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred CCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence 999999999998 9999999999876443
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.2e-18 Score=170.63 Aligned_cols=105 Identities=21% Similarity=0.199 Sum_probs=39.5
Q ss_pred CCCCCCeEeccCcccCCCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEecccccccccCCcccccccccCc
Q 003065 142 ALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGT 221 (851)
Q Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 221 (851)
.+++|++|++++|.++ .+| .+..+++|++|++++|.+. .+..+..+++|++|++++|++++..|..+..+++|++
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~---~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT---NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS---CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC---cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 3344444444444443 222 2333444444444444322 1123333334444444444433333333333333333
Q ss_pred cccccccccccccccccCCCcccEEEeecc
Q 003065 222 LDICRNKISGEFPRSIRKLQKLWKIELYAN 251 (851)
Q Consensus 222 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N 251 (851)
|++++|++++..|..+..+++|++|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n 146 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYN 146 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCC
Confidence 333333333333333333333333333333
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=3.1e-18 Score=185.47 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=68.7
Q ss_pred CCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCccc-EEEecCCcccCCCCCCccccccccee
Q 003065 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLS-SLHLEENALTGSIPNEMGDCARIVDL 510 (851)
Q Consensus 432 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 510 (851)
+++|+.++|++|+++.+.+.+|.++.+|+.|+|.+| ++...+.+|.++++|+ .|++.+ .++.+.+..|.++.+|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566677777766666555566777777777777766 5555556677777776 777766 5655556667777777777
Q ss_pred eccCcccccccCCCccccccCCeEe
Q 003065 511 NLARNSLSGNIPRSLSLLSSLNALN 535 (851)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 535 (851)
+++.|+++...+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 7777777766666777777777665
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.2e-18 Score=188.68 Aligned_cols=103 Identities=15% Similarity=0.052 Sum_probs=74.7
Q ss_pred ccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCc-EEeccCccccCCCccccccCCcccEE
Q 003065 408 LPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLE-RLILTNNNFSGKIPSALGALRQLSSL 486 (851)
Q Consensus 408 l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 486 (851)
+++|+.|+|++|+++.+.+..|..+++|+.++|++| ++.+.+.+|.++.+|+ .+++.+ .++...+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566777777776676666667777777777777776 6656667777777777 777777 6665666777777788888
Q ss_pred EecCCcccCCCCCCcccccccceeec
Q 003065 487 HLEENALTGSIPNEMGDCARIVDLNL 512 (851)
Q Consensus 487 ~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (851)
++++|+++...+..|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 88777777666677777777777653
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=2.1e-17 Score=163.86 Aligned_cols=133 Identities=23% Similarity=0.379 Sum_probs=87.1
Q ss_pred eEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcc
Q 003065 437 QLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNS 516 (851)
Q Consensus 437 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (851)
.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555554 3444332 35666666666665 455666666666667777776666666666677777777777777
Q ss_pred cccccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCcccc
Q 003065 517 LSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFL 573 (851)
Q Consensus 517 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~~ 573 (851)
|++..|..|..+++|+.|+|++|+|++..+..+..+ .|+.|++++|+|.|.+...|.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l 147 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWL 147 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHH
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHH
Confidence 776666677777777777777777774444456666 777888888888887775543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=5e-17 Score=157.42 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=102.2
Q ss_pred CCccCcEEeCCCCccc-CccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCcccccee
Q 003065 95 ALQSLTVLSLPFNVLS-GKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (851)
Q Consensus 95 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 173 (851)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. +.+..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 3477889999999887 78888888889999999999988877 668888888888888888887677777778888888
Q ss_pred ecccccCCCCCCcccccCCCCCCeEecccccccccCC---cccccccccCcccccccccc
Q 003065 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP---ESISELRELGTLDICRNKIS 230 (851)
Q Consensus 174 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~~N~i~ 230 (851)
++++|.++....+..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 8888877622222567777777777777777774433 35666666777776666665
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.1e-16 Score=154.98 Aligned_cols=132 Identities=20% Similarity=0.178 Sum_probs=92.4
Q ss_pred cccceeccccCccc-cccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEe
Q 003065 385 KTIQRLRISDNHLS-GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLI 463 (851)
Q Consensus 385 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 463 (851)
++|++|++++|+++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 67888888888887 67787778888888888888888765 5666777777777777777766666666677777777
Q ss_pred ccCccccCCCc-cccccCCcccEEEecCCcccCCCC---CCcccccccceeeccCcccc
Q 003065 464 LTNNNFSGKIP-SALGALRQLSSLHLEENALTGSIP---NEMGDCARIVDLNLARNSLS 518 (851)
Q Consensus 464 Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 518 (851)
+++|++++..+ ..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.++
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777765422 566666677777777776664433 25555666666666666555
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=6.8e-17 Score=153.11 Aligned_cols=130 Identities=22% Similarity=0.242 Sum_probs=100.9
Q ss_pred CCccCcEEeCCCCccc-CccCcccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCcccccee
Q 003065 95 ALQSLTVLSLPFNVLS-GKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (851)
Q Consensus 95 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 173 (851)
..++|++|++++|.++ +.+|..++.+++|++|++++|.+++. +.++.+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 3477889999999988 78888888999999999999988877 668888889999999988887777777778888888
Q ss_pred ecccccCCCCCCcccccCCCCCCeEecccccccccCC---cccccccccCccccc
Q 003065 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP---ESISELRELGTLDIC 225 (851)
Q Consensus 174 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~ 225 (851)
++++|.++....|..+..+++|++|++++|++++..+ ..+..+++|++||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888887632233667777777777777777775544 356667777777665
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=7.1e-16 Score=152.79 Aligned_cols=128 Identities=23% Similarity=0.272 Sum_probs=101.1
Q ss_pred eEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCc
Q 003065 413 MLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (851)
Q Consensus 413 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (851)
.+++++|+++..+... .++|+.|+|++|+|+ .+|..|.++++|++|+|++|.|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~ip~~~---~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGI---PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSSCCSCC---CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCcCCCCC---CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4455555554333221 246777888888877 667788888888888888888888878888888889999999999
Q ss_pred ccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccc
Q 003065 493 LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (851)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 544 (851)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 8888888888889999999999999877667788899999999999998753
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=5.3e-16 Score=151.61 Aligned_cols=113 Identities=24% Similarity=0.270 Sum_probs=58.3
Q ss_pred CCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeC
Q 003065 457 TNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNL 536 (851)
Q Consensus 457 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 536 (851)
++|+.|++++|++++..+..|..+++|++|+|++|++++..+..++.+++|+.|++++|+|++..+..+..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34555555555555444444455555555555555555444444455555555555555555444444555555555555
Q ss_pred CCCccccccCcccccc-cceEEeCcCCcccccCC
Q 003065 537 SGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVP 569 (851)
Q Consensus 537 s~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p 569 (851)
++|++++..+..+..+ .|+.|++++|++.|.+|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 5555553333333444 55555555555555555
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=7.4e-16 Score=150.56 Aligned_cols=132 Identities=22% Similarity=0.267 Sum_probs=98.9
Q ss_pred ceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCC
Q 003065 412 GMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEEN 491 (851)
Q Consensus 412 ~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 491 (851)
+.+++++|+++..+... .++|+.|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSCCTTC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccCCCCC---CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34455555554433221 246777777777777666666777788888888888888776777788888888888888
Q ss_pred cccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccccccC
Q 003065 492 ALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (851)
Q Consensus 492 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip 546 (851)
++++..+..++.+++|+.|++++|++++..+..+..+++|+.|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887777778888888888888888886666667888999999999999997665
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2.4e-16 Score=149.31 Aligned_cols=127 Identities=21% Similarity=0.195 Sum_probs=75.7
Q ss_pred cccceeccccCccc-cccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEe
Q 003065 385 KTIQRLRISDNHLS-GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLI 463 (851)
Q Consensus 385 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 463 (851)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56777777777777 66777667777777777777776655 4455566666666666666654555555556666666
Q ss_pred ccCccccCC-CccccccCCcccEEEecCCcccCCCC---CCcccccccceeecc
Q 003065 464 LTNNNFSGK-IPSALGALRQLSSLHLEENALTGSIP---NEMGDCARIVDLNLA 513 (851)
Q Consensus 464 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 513 (851)
+++|++++. .+..+..+++|++|++++|++++..+ ..++.+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666665542 23455555555555555555554333 234444445544443
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1.3e-14 Score=160.52 Aligned_cols=227 Identities=11% Similarity=0.094 Sum_probs=92.8
Q ss_pred CccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhc
Q 003065 290 NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLAL 369 (851)
Q Consensus 290 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~ 369 (851)
+|+.+.+..| ++......|.+. +|+.+.+.. .++...+.+|..+++|+.+++++|+++. +|...+...+|+.+.+.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeC
Confidence 4444444433 332333344442 355555543 3443444555555555555555555542 22211111222222221
Q ss_pred cCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcce---
Q 003065 370 SNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFS--- 446 (851)
Q Consensus 370 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~--- 446 (851)
+++...-..+|.++++|+.+++..| ++.....+|.+ .+|+.+++ .|.++.+....|..+++|+.+++.+|.+.
T Consensus 212 -~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 -VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp -TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred -CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 1122222344555555555555543 33233333333 44455544 23344334444444444444444444332
Q ss_pred --eeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCC
Q 003065 447 --GELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRS 524 (851)
Q Consensus 447 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 524 (851)
...+.+|.++++|+.++|. |.++.....+|.++++|+.++|..| ++..-+..|.++ +|+.+++++|.+....+..
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~ 364 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKV 364 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSS
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccccc
Confidence 2333344444444444444 2233333334444444444444322 332333344444 4444444444443333333
Q ss_pred ccc
Q 003065 525 LSL 527 (851)
Q Consensus 525 ~~~ 527 (851)
|.+
T Consensus 365 F~~ 367 (401)
T 4fdw_A 365 WYG 367 (401)
T ss_dssp CCC
T ss_pred ccC
Confidence 333
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=2.7e-14 Score=157.94 Aligned_cols=265 Identities=10% Similarity=0.079 Sum_probs=145.4
Q ss_pred CCCCeEecccccccccCCcccccccccCccccccccccccccccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEec
Q 003065 193 KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDI 272 (851)
Q Consensus 193 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 272 (851)
..++.+.+.+ .++.+...+|.+. +|+.+++..| ++.+...+|.+. +|+.+.+.. .++...+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4455555532 3443444455552 4666665544 444444455552 455555553 444344445555555555555
Q ss_pred ccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceeeccCCccccc
Q 003065 273 SSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS 352 (851)
Q Consensus 273 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 352 (851)
++|+++......|. .++|+.+ .+..+ ++.....+|..+++|+.+++..| ++.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l------------------------~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~- 239 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEV------------------------LLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VST- 239 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEE------------------------ECCTT-CCEECTTTTTTCTTCCCEECCTT-CCE-
T ss_pred CCCcceEechhhEe-ecccCEE------------------------EeCCc-hheehhhHhhCCCCCCEEecCCC-ccC-
Confidence 55555432222333 3444444 44422 33334445555555555555443 221
Q ss_pred CchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCC-----CCCCc
Q 003065 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFT-----GGISP 427 (851)
Q Consensus 353 ~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~~~ 427 (851)
.-..+|.+ .+|+.+++ .|.++...+.+|.++++|+.+++.+|.+. .+.+.
T Consensus 240 -----------------------I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~ 294 (401)
T 4fdw_A 240 -----------------------IGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPY 294 (401)
T ss_dssp -----------------------ECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTT
T ss_pred -----------------------cccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHH
Confidence 11123333 34555555 33444344455556666666666655544 34555
Q ss_pred ccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCccccc-c
Q 003065 428 LIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCA-R 506 (851)
Q Consensus 428 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~ 506 (851)
.|..+++|+.++|. +.++.+...+|.++++|+.++|.+| ++...+.+|.++ +|+.|++++|.+....+..|.+++ .
T Consensus 295 aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~ 371 (401)
T 4fdw_A 295 CLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDD 371 (401)
T ss_dssp TTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTT
T ss_pred HhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCC
Confidence 67777777777777 3466566677777888888888554 555556777777 788888888877766666676663 5
Q ss_pred cceeeccCcccc
Q 003065 507 IVDLNLARNSLS 518 (851)
Q Consensus 507 L~~L~Ls~N~l~ 518 (851)
++.|++..|.+.
T Consensus 372 l~~l~vp~~~~~ 383 (401)
T 4fdw_A 372 ITVIRVPAESVE 383 (401)
T ss_dssp CCEEEECGGGHH
T ss_pred ccEEEeCHHHHH
Confidence 667777666544
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=1.5e-15 Score=163.80 Aligned_cols=134 Identities=16% Similarity=0.135 Sum_probs=98.3
Q ss_pred CccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc----------------ccHH--------HHHHHHHHHHcCCCCcc
Q 003065 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----------------DGVK--------VFAAEMEILGKIRHRNI 733 (851)
Q Consensus 678 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----------------~~~~--------~~~~E~~~l~~l~h~ni 733 (851)
|.+.+.||+|+||.||+|.+ .+|+.||||+++.. .... ...+|...+.++.+..+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88999999999999999998 46899999986421 0011 12457777777765554
Q ss_pred cc--EEEEEEeCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCCCEE
Q 003065 734 LK--LYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNIL 811 (851)
Q Consensus 734 v~--l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~NIL 811 (851)
.. .+++ . ..++||||++|+++.++.. .+ ....++.|++.++.||| +.|||||||||.|||
T Consensus 176 ~vp~p~~~--~--~~~LVME~i~G~~L~~l~~---------~~--~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NIL 237 (397)
T 4gyi_A 176 PVPEPIAQ--S--RHTIVMSLVDALPMRQVSS---------VP--DPASLYADLIALILRLA---KHGLIHGDFNEFNIL 237 (397)
T ss_dssp SCCCEEEE--E--TTEEEEECCSCEEGGGCCC---------CS--CHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEE
T ss_pred CCCeeeec--c--CceEEEEecCCccHhhhcc---------cH--HHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEE
Confidence 32 2322 2 2479999999888743211 11 23467899999999999 679999999999999
Q ss_pred ECCCC----------ceEEeeecCccccC
Q 003065 812 LDEDY----------EPKIADFGVAKIAE 830 (851)
Q Consensus 812 l~~~~----------~~kl~DFGla~~~~ 830 (851)
+++++ .+.|+||+-+....
T Consensus 238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 238 IREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EeCCCCcccccccccceEEEEeCCcccCC
Confidence 98776 38999999876543
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=2.4e-17 Score=164.35 Aligned_cols=106 Identities=24% Similarity=0.285 Sum_probs=49.9
Q ss_pred CccCcEEeCCCCcccCccCc------ccccCCCCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccc
Q 003065 96 LQSLTVLSLPFNVLSGKLPL------ELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQ 169 (851)
Q Consensus 96 l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 169 (851)
...++.++++.+.++|.+|. .|+.+++|++|+|++|.+++. |.+..+++|++|++++|.++ .+|..+..+++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-SSLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-CCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-cccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 34444455555555544444 555555555555555555542 24455555555555555554 33444444444
Q ss_pred cceeecccccCCCCCCcccccCCCCCCeEeccccccc
Q 003065 170 LVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLR 206 (851)
Q Consensus 170 L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 206 (851)
|++|++++|+++ .+| .+..+++|++|++++|+++
T Consensus 95 L~~L~L~~N~l~--~l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 95 LEELWISYNQIA--SLS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp CSEEEEEEEECC--CHH-HHHHHHHSSEEEESEEECC
T ss_pred CCEEECcCCcCC--cCC-ccccCCCCCEEECCCCcCC
Confidence 444444444443 122 2333444444444444443
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=3e-17 Score=163.65 Aligned_cols=138 Identities=22% Similarity=0.278 Sum_probs=75.9
Q ss_pred ccCccccceeccccCccccccCC------cccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccc
Q 003065 381 YADCKTIQRLRISDNHLSGKIPD------GLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELG 454 (851)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 454 (851)
+.....++.++++.|.++|.+|. .+..+++|++|++++|++++ +| .+..+++|+.|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34455677778888888777665 55556666666666666555 22 4555555555555555555 4444455
Q ss_pred cCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCC-CCcccccccceeeccCcccccccCC
Q 003065 455 RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIP-NEMGDCARIVDLNLARNSLSGNIPR 523 (851)
Q Consensus 455 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~ 523 (851)
.+++|++|++++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 55555555555555553 23 35555555555555555543211 2444555555555555555544443
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2.7e-15 Score=146.43 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=101.7
Q ss_pred ccccCCccCcEEeCCCCcccCccCcccccCC-CCceEecccCcccCCCCCCCCCCCCCeEeccCcccCCCCcccccCccc
Q 003065 91 SSISALQSLTVLSLPFNVLSGKLPLELSNCS-NLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQ 169 (851)
Q Consensus 91 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 169 (851)
+.+.++.+|++|+|++|+++. +|. +..+. +|++|+|++|.+++. +.++.+++|++|+|++|.+++..+..+..+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 356677888888888888884 454 55554 888888888888876 66888888888888888888655555678888
Q ss_pred cceeecccccCCCCCCcc--cccCCCCCCeEecccccccccCCcc----cccccccCcccccccccc
Q 003065 170 LVSLSIGDNVYDEAEIPE--SIGNLKNLTYLFLAHCNLRGRIPES----ISELRELGTLDICRNKIS 230 (851)
Q Consensus 170 L~~L~L~~N~l~~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~----~~~l~~L~~L~L~~N~i~ 230 (851)
|++|++++|.+. .+|. .+..+++|++|++++|.++ .+|.. +..+++|++||++.|.+.
T Consensus 90 L~~L~L~~N~i~--~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV--ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC--CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC--cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888885 5565 6777888888888888887 45553 777777777777777765
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.4e-15 Score=145.62 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=48.6
Q ss_pred CCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCC--Ccccccccceee
Q 003065 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPN--EMGDCARIVDLN 511 (851)
Q Consensus 434 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~ 511 (851)
+|+.|+|++|++++. ..|..+++|++|+|++|.+++..|..+..+++|++|+|++|+++ .+|. .++.+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 444444444444432 33444445555555555554333333344555555555555553 2332 344444444444
Q ss_pred ccCcccccccCCC----ccccccCCeEeCCCCccc
Q 003065 512 LARNSLSGNIPRS----LSLLSSLNALNLSGNKLT 542 (851)
Q Consensus 512 Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 542 (851)
+++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 4444444 23332 445555555555555543
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=7.7e-14 Score=154.79 Aligned_cols=333 Identities=10% Similarity=0.026 Sum_probs=170.1
Q ss_pred cCCCCcccccCccccceeecccccCCCCCC-cccccCCCCCCeEecccccccccCCcccccccccCcccccccccccccc
Q 003065 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEI-PESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFP 234 (851)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~p 234 (851)
++.+...+|.++++|+++.+..+ ++ .| ...|.++++|+.+++..+ ++.....+|.++++|+.+.+..+ +.....
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~--~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VR--EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CC--EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-cc--CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc
Confidence 33344567777888888888644 33 23 235777778888877644 55455566777777777666543 333444
Q ss_pred ccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCccc
Q 003065 235 RSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK 314 (851)
Q Consensus 235 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 314 (851)
.+|.+...+...... .+......+|.++++|+.+.+..+... .....|.++.+|+.+++..| ++......|.++..
T Consensus 134 ~aF~~~~~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~ 209 (394)
T 4fs7_A 134 EAFKGCDFKEITIPE--GVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECIL 209 (394)
T ss_dssp TTTTTCCCSEEECCT--TCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccccccCc--cccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccc
Confidence 556555433322221 122223345666666666666544322 33334555555555555443 22222334444444
Q ss_pred ccEEEeccCcCCCCCCCccCCCCccceeeccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceecccc
Q 003065 315 LFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISD 394 (851)
Q Consensus 315 L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~ 394 (851)
|+.+.+..+... +.+......+|+.+.+.. .....-...|..+..|+.+.+..
T Consensus 210 L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~-------------------------~~~~i~~~~f~~~~~l~~~~~~~ 262 (394)
T 4fs7_A 210 LENMEFPNSLYY--LGDFALSKTGVKNIIIPD-------------------------SFTELGKSVFYGCTDLESISIQN 262 (394)
T ss_dssp CCBCCCCTTCCE--ECTTTTTTCCCCEEEECT-------------------------TCCEECSSTTTTCSSCCEEEECC
T ss_pred cceeecCCCceE--eehhhcccCCCceEEECC-------------------------CceecccccccccccceeEEcCC
Confidence 444444333221 111112222333333221 11112234456666666666665
Q ss_pred CccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCc
Q 003065 395 NHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIP 474 (851)
Q Consensus 395 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 474 (851)
+... .....|.....++.+....+.+ ....|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++....
T Consensus 263 ~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~ 336 (394)
T 4fs7_A 263 NKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGK 336 (394)
T ss_dssp TTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECT
T ss_pred Ccce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhH
Confidence 5443 4445566666666666655432 2234555666666666544 44444556666666666666533 443444
Q ss_pred cccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCe
Q 003065 475 SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNA 533 (851)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 533 (851)
.+|.++.+|+.+++..| ++..-..+|.++.+|+.+++..+ ++ .+..+|.+.++|+.
T Consensus 337 ~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 337 RSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred HhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 56666666666666555 44444455666666666666543 22 22344555555543
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=1.7e-13 Score=151.96 Aligned_cols=122 Identities=11% Similarity=0.087 Sum_probs=69.2
Q ss_pred ccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCCCc
Q 003065 381 YADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLE 460 (851)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 460 (851)
|..+..++.+....+.+ ....|..+.+|+.+.+.++ ++.+....|.++++|+.++|.++ ++.+-..+|.++.+|+
T Consensus 272 F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~ 346 (394)
T 4fs7_A 272 FYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLS 346 (394)
T ss_dssp TTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCC
T ss_pred cccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCC
Confidence 44444444444443322 1224445555555555443 44444555666666666666543 5545566777777777
Q ss_pred EEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCccccccccee
Q 003065 461 RLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDL 510 (851)
Q Consensus 461 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 510 (851)
.+++..| ++.....+|.++++|+.+++..+ ++ .+...|.++.+|+.+
T Consensus 347 ~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 347 NINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred EEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 7777665 55455567777777777777654 22 234566666666553
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4.8e-14 Score=136.46 Aligned_cols=105 Identities=22% Similarity=0.272 Sum_probs=56.5
Q ss_pred CCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccC
Q 003065 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (851)
Q Consensus 435 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (851)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345666666665 3444332 4555555555555555555555555555555555555544444455555555555555
Q ss_pred cccccccCCCccccccCCeEeCCCCccc
Q 003065 515 NSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (851)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (851)
|+|++..+..|..+++|+.|+|++|+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5555444444555555555555555554
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=6.8e-14 Score=135.42 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=86.3
Q ss_pred CcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCC
Q 003065 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (851)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (851)
.+.+++++|.++. +|..+. +.|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4678888888874 555553 6788888888888887788888888888888888888877777778888888888888
Q ss_pred CccccccCcccccc-cceEEeCcCCcccccCC
Q 003065 539 NKLTGSIPDNLMKL-KLSSIDLSENQLSGSVP 569 (851)
Q Consensus 539 N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p 569 (851)
|+|++..|..+..+ .|+.|+|++|+|.|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 88886555567777 78888888888888876
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.2e-13 Score=134.09 Aligned_cols=104 Identities=25% Similarity=0.325 Sum_probs=61.4
Q ss_pred CeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCc
Q 003065 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARN 515 (851)
Q Consensus 436 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (851)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 44555555554 4444432 55666666666666555666666666666666666666544444556666666666666
Q ss_pred ccccccCCCccccccCCeEeCCCCccc
Q 003065 516 SLSGNIPRSLSLLSSLNALNLSGNKLT 542 (851)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (851)
+|++..+..|..+++|+.|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666544445666666666666666666
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.4e-13 Score=133.69 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=97.3
Q ss_pred CcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCC
Q 003065 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (851)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (851)
-+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999997 6676665 7999999999999999999999999999999999999987777789999999999999
Q ss_pred CccccccCcccccc-cceEEeCcCCcccccCC
Q 003065 539 NKLTGSIPDNLMKL-KLSSIDLSENQLSGSVP 569 (851)
Q Consensus 539 N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p 569 (851)
|+|++..|..+..+ .|+.|++++|+|.|.++
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99996555568888 99999999999999886
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=5.8e-13 Score=145.09 Aligned_cols=108 Identities=23% Similarity=0.266 Sum_probs=63.5
Q ss_pred EeccCc-cccCCCccccccCCcccEEEecC-CcccCCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCC
Q 003065 462 LILTNN-NFSGKIPSALGALRQLSSLHLEE-NALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGN 539 (851)
Q Consensus 462 L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (851)
++++++ .|++ +|. +..+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++..|..|..+++|+.|||++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 5552 444 55555666666664 6665555555666666666666666666666666666666666666666
Q ss_pred ccccccCcccccccceEEeCcCCcccccCCcc
Q 003065 540 KLTGSIPDNLMKLKLSSIDLSENQLSGSVPLD 571 (851)
Q Consensus 540 ~l~g~ip~~l~~l~L~~l~ls~N~l~~~~p~~ 571 (851)
+|++..|..+..+.|+.|+|++|+|.|.+...
T Consensus 91 ~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~ 122 (347)
T 2ifg_A 91 ALESLSWKTVQGLSLQELVLSGNPLHCSCALR 122 (347)
T ss_dssp CCSCCCSTTTCSCCCCEEECCSSCCCCCGGGH
T ss_pred ccceeCHHHcccCCceEEEeeCCCccCCCccH
Confidence 66643333444445666666666666666543
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=1.9e-14 Score=157.63 Aligned_cols=166 Identities=17% Similarity=0.192 Sum_probs=110.3
Q ss_pred ccccceeccccCccccccCCcccCc-----cccceEEecCCcCCCCCCcc-cccCCCCCeEecCCCcceeeCCcccc---
Q 003065 384 CKTIQRLRISDNHLSGKIPDGLWAL-----PNVGMLDFGDNDFTGGISPL-IGLSTSLSQLVLQNNRFSGELPSELG--- 454 (851)
Q Consensus 384 l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~~~~-~~~~~~L~~L~Ls~N~l~~~~p~~~~--- 454 (851)
++.|++|+|++|.++......+... ++|+.|+|++|+++...... ...+++|+.|+|++|.++......++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3568888999998875544443332 67888888888876432222 23356788888888888755444442
Q ss_pred --cCCCCcEEeccCccccCC----CccccccCCcccEEEecCCcccCC----CCCCcccccccceeeccCcccccc----
Q 003065 455 --RLTNLERLILTNNNFSGK----IPSALGALRQLSSLHLEENALTGS----IPNEMGDCARIVDLNLARNSLSGN---- 520 (851)
Q Consensus 455 --~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 520 (851)
..++|++|+|++|.|+.. ++..+...+.|++|+|++|+|+.. ++..+...+.|+.|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 356788888888888642 334456677888888888887642 244556667788888888888753
Q ss_pred cCCCccccccCCeEeCCCCccccccCccc
Q 003065 521 IPRSLSLLSSLNALNLSGNKLTGSIPDNL 549 (851)
Q Consensus 521 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l 549 (851)
++..+...++|+.|||++|.|+..-...+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 33344456778888888888875444444
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=1.6e-12 Score=141.47 Aligned_cols=130 Identities=25% Similarity=0.227 Sum_probs=65.7
Q ss_pred EecCCC-cceeeCCcccccCCCCcEEeccC-ccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCc
Q 003065 438 LVLQNN-RFSGELPSELGRLTNLERLILTN-NNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARN 515 (851)
Q Consensus 438 L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (851)
++++++ +++ .+|. +..+++|+.|+|++ |.|++..|..|.++++|+.|+|++|+|++..|..|+++++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 444 3444 55555555555553 5555555555555555555555555555555555555555555555555
Q ss_pred ccccccCCCccccccCCeEeCCCCccccccC-cccccc-cceEEeCcCCcccccCCc
Q 003065 516 SLSGNIPRSLSLLSSLNALNLSGNKLTGSIP-DNLMKL-KLSSIDLSENQLSGSVPL 570 (851)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip-~~l~~l-~L~~l~ls~N~l~~~~p~ 570 (851)
+|++..+..|..++ |+.|+|++|+|...-. .++..+ ......+..+++.|..|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 55544444444443 6666666666653211 112111 122223344566666654
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.30 E-value=2.8e-11 Score=134.11 Aligned_cols=158 Identities=13% Similarity=0.069 Sum_probs=99.5
Q ss_pred CCcccccCcc-ccceeecccccCCCCCC-cccccCCCCCCeEeccccc---ccccCCcccccccccCccccccccccccc
Q 003065 159 RFPRWVVNLT-QLVSLSIGDNVYDEAEI-PESIGNLKNLTYLFLAHCN---LRGRIPESISELRELGTLDICRNKISGEF 233 (851)
Q Consensus 159 ~~~~~~~~l~-~L~~L~L~~N~l~~~~~-p~~~~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~L~~N~i~~~~ 233 (851)
+...+|.+.. .|+++.+..+ ++ .| ...|.++++|+.+.+..|. ++.....+|.+..+|+.+.+..+ ++...
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt--~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~ 129 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VT--EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEID 129 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CC--EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEEC
T ss_pred cCHhhccCCCCcCEEEEECCC-ee--EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceeh
Confidence 3455677764 5888888654 32 22 3467888899999888764 65555667888888888877654 44455
Q ss_pred cccccCCCcccEEEeeccCccCcCCcCcCCCCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcc
Q 003065 234 PRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMR 313 (851)
Q Consensus 234 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 313 (851)
..+|..+.+|+.+.+..+ +.......|....+|+.+.+..+ ++..-...|.+ .+|+.+.+..+-.. .....|.++.
T Consensus 130 ~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~ 205 (394)
T 4gt6_A 130 SEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECF 205 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCT
T ss_pred hhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhcc
Confidence 667888888888888654 33355567777888888877655 33233334433 56777766544322 3344566666
Q ss_pred cccEEEeccCc
Q 003065 314 KLFAFSIYGNR 324 (851)
Q Consensus 314 ~L~~L~l~~N~ 324 (851)
.+.......+.
T Consensus 206 ~l~~~~~~~~~ 216 (394)
T 4gt6_A 206 ALSTITSDSES 216 (394)
T ss_dssp TCCEEEECCSS
T ss_pred ccceecccccc
Confidence 66655554443
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=5.9e-14 Score=153.63 Aligned_cols=61 Identities=20% Similarity=0.132 Sum_probs=29.1
Q ss_pred CCCceEecccCcccCCCCC-----CC-CCCCCCeEeccCcccCCCCcccc-cCccccceeecccccCC
Q 003065 121 SNLKVLNVTGNAMVGSVPD-----LS-ALKNLEIFDLSINYFTGRFPRWV-VNLTQLVSLSIGDNVYD 181 (851)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~~~-----l~-~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~ 181 (851)
++|++|+|++|.++..... +. ..++|++|||++|.++......+ ..+++|++|+|++|.+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~ 139 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG 139 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC
Confidence 4566666666666542211 11 22456666666665543322222 22344555555555443
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.22 E-value=1.8e-10 Score=127.63 Aligned_cols=328 Identities=12% Similarity=0.090 Sum_probs=157.7
Q ss_pred cccCCC-CCCeEecccccccccCCcccccccccCcccccccc---ccccccccccCCCcccEEEeeccCccCcCCcCcCC
Q 003065 188 SIGNLK-NLTYLFLAHCNLRGRIPESISELRELGTLDICRNK---ISGEFPRSIRKLQKLWKIELYANNLTGELPAELGN 263 (851)
Q Consensus 188 ~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 263 (851)
.|.+.+ .|+.+.+..+ ++.+-..+|.++++|+.+.+..|. ++.+...+|..+.+|+.+.+..+ ++.....+|..
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 344553 4777777543 665566677777778777777653 55455567777777777666544 44345566777
Q ss_pred CCcccEEecccccccCCCCccccCcCCccEEEccCCccCCCCCCCCCCcccccEEEeccCcCCCCCCCccCCCCccceee
Q 003065 264 LTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVD 343 (851)
Q Consensus 264 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 343 (851)
+.+|+.+.+..+. .......|.++.+|+.+.+..+ ++......|.+ ..|+.+.+..+-.. ....+|..+.+++...
T Consensus 136 c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~ 211 (394)
T 4gt6_A 136 CEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTIT 211 (394)
T ss_dssp CTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEE
T ss_pred hccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceec
Confidence 7777777776443 2244456667777777776554 33233334543 45666666554332 3445566666666665
Q ss_pred ccCCcccccCchhhhhhcchHHHHhccCCccccccccccCccccceeccccCccccccCCcccCccccceEEecCCcCCC
Q 003065 344 ISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTG 423 (851)
Q Consensus 344 Ls~N~l~~~~p~~~~~~~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 423 (851)
...+.... +...+.... .........+.....+..+.+. +.++..-..+|.++.+|+.+.+.++. ..
T Consensus 212 ~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~-~~ 278 (394)
T 4gt6_A 212 SDSESYPA-IDNVLYEKS----------ANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSV-VS 278 (394)
T ss_dssp ECCSSSCB-SSSCEEEEC----------TTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTC-CE
T ss_pred cccccccc-ccceeeccc----------ccccccccccccccccceEEcC-CcceEcccceeeecccccEEeccccc-ce
Confidence 55444331 111110000 0000000001111222223222 22222333445555555555554332 22
Q ss_pred CCCcccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCccc
Q 003065 424 GISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGD 503 (851)
Q Consensus 424 ~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 503 (851)
.....|.++++|+.+.+. +.++.....+|.++.+|+.++|..+ ++.....+|.++.+|+.+.|..+ ++..-...|.+
T Consensus 279 I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~ 355 (394)
T 4gt6_A 279 IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSN 355 (394)
T ss_dssp ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTT
T ss_pred ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhC
Confidence 333444555555555554 2333344445555555555555433 33333445555555555555433 33333445555
Q ss_pred ccccceeeccCcccccccCCCccccccCCeEeCCCCc
Q 003065 504 CARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNK 540 (851)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 540 (851)
+.+|+.+++.+|.... ..+....+|+.+.+..|.
T Consensus 356 C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 356 CTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 5555555555554321 234444455555544443
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=2.1e-11 Score=126.96 Aligned_cols=144 Identities=17% Similarity=0.059 Sum_probs=112.3
Q ss_pred HHHcCCccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCC-CCccccEEEEEEeCCeeEEE
Q 003065 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLV 749 (851)
Q Consensus 673 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 749 (851)
..+.+|+.....+.|+.+.||++.. .++.+++|+.... .....+.+|+++++.+. |..++++++++...+..|+|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 3466888888888899999999975 3678999988642 23346889999999984 67788899999999999999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD---------------------------------- 795 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------------------------------- 795 (851)
|||++|.++.+.+.. . .....++.++++++..||..
T Consensus 89 ~e~i~G~~l~~~~~~-------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 89 MSEADGVLCSEEYED-------E---QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EECCSSEEHHHHCCT-------T---TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEecCCeehhhccCC-------c---ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 999999988764210 1 11236788999999999961
Q ss_pred ----------------------CCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 796 ----------------------CSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 796 ----------------------~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
....++|+|++|.||+++++..+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998765667999998853
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.07 E-value=1.7e-11 Score=132.90 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=103.6
Q ss_pred CceEEEecccCCcce-e-------cCccccCCccCcEEeCCCCccc---------CccCcccccCCCCceEecccCcccC
Q 003065 73 GRVTEISFDNKSLSG-E-------ISSSISALQSLTVLSLPFNVLS---------GKLPLELSNCSNLKVLNVTGNAMVG 135 (851)
Q Consensus 73 ~~v~~l~l~~~~l~g-~-------i~~~l~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~n~l~~ 135 (851)
.+|++|.+....+.| . +.+++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 478888887666553 2 2455677888888888665331 1234445667788888887763111
Q ss_pred CCCCCCCCCCCCeEeccCcccCCCCccccc--Cccccceeeccc--ccCCCC----CCcccccCCCCCCeEecccccccc
Q 003065 136 SVPDLSALKNLEIFDLSINYFTGRFPRWVV--NLTQLVSLSIGD--NVYDEA----EIPESIGNLKNLTYLFLAHCNLRG 207 (851)
Q Consensus 136 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~----~~p~~~~~l~~L~~L~L~~n~l~~ 207 (851)
.+.+. +++|+.|+|..|.++......+. .+++|++|+|+. |..... .+...+.
T Consensus 187 -l~~~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~----------------- 247 (362)
T 2ra8_A 187 -IGKKP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS----------------- 247 (362)
T ss_dssp -CCSCB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC-----------------
T ss_pred -ecccc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh-----------------
Confidence 12232 67777777777766533333332 566666666642 211100 0001111
Q ss_pred cCCcccccccccCcccccccccccccccccc---CCCcccEEEeeccCccCc----CCcCcCCCCcccEEecccccccCC
Q 003065 208 RIPESISELRELGTLDICRNKISGEFPRSIR---KLQKLWKIELYANNLTGE----LPAELGNLTLLQEFDISSNQMYGK 280 (851)
Q Consensus 208 ~~p~~~~~l~~L~~L~L~~N~i~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 280 (851)
-..+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+++. ++..+.++++|+.|+|++|.++..
T Consensus 248 -----~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 248 -----KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp -----TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred -----cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 01234445555544444432222221 345566666666665542 223334556677777776666532
Q ss_pred CCccccC-cCCccEEEccCCc
Q 003065 281 LPEEIGN-LKNLTVFQCFKNN 300 (851)
Q Consensus 281 ~p~~l~~-l~~L~~L~l~~N~ 300 (851)
.-..+.. + ...++++.++
T Consensus 323 ~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 323 MKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHc--CCEEEecCCc
Confidence 2222222 1 2446666665
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06 E-value=9.4e-11 Score=121.80 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=98.5
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCc--cccEEEEEEeCCeeEEEEeccC
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~ 754 (851)
+|......+.|..+.||++.. .++..+++|+.... ....+.+|+++++.+.+.+ +++++++...++..|+||||++
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~ 98 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 98 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence 344433334566699999965 45678999987544 3345778999999986544 5568888888888999999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-------------------------------------- 796 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 796 (851)
|.++. .. ... ...++.++++.+..||...
T Consensus 99 G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 99 GQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp SEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 98773 11 011 1245677777777777421
Q ss_pred -----------------CCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 797 -----------------SPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 797 -----------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
...++|+|++|+||++++++.++|+|||.|...
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999987766779999998643
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.00 E-value=2.2e-08 Score=110.02 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=52.1
Q ss_pred ccccCCCCCeEecCCCcceeeCCcccccCCCCcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCccccccc
Q 003065 428 LIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARI 507 (851)
Q Consensus 428 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 507 (851)
.|..+..|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++.....+|.++++|+.+++.++.++..-...|.++.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 3444444555554443 33333444555555555555432 332333445555555555555555544444455555555
Q ss_pred ceeeccCcccccccCCCccccccCCeEeCC
Q 003065 508 VDLNLARNSLSGNIPRSLSLLSSLNALNLS 537 (851)
Q Consensus 508 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 537 (851)
+.++|..+ ++..-..+|.++++|+.+.+.
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 55555433 443334455555555555554
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.97 E-value=2.4e-08 Score=109.73 Aligned_cols=144 Identities=13% Similarity=0.156 Sum_probs=82.9
Q ss_pred ccccCccccceeccccCccccccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCcccccCCC
Q 003065 379 NSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTN 458 (851)
Q Consensus 379 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 458 (851)
..+..+.+|+.+.+..+ +......+|.++..|+.+.+..+ ++.+....|..+.+|+.+.+..+ +......+|.++.+
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34555566666666543 33244445566666666666554 44445556666666666666543 44344556666667
Q ss_pred CcEEeccCccccCCCccccccCCcccEEEecCCcccCCCCCCcccccccceeeccCcccccccCCCccc
Q 003065 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSL 527 (851)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 527 (851)
|+.+++.++.++...+.+|.++.+|+.++|..+ ++.+-..+|.++.+|+.+.+..+ ++..-..+|.+
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~ 354 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEG 354 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhC
Confidence 777777666666555566666666777766543 44344556666666666666543 44333344443
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.94 E-value=8.1e-12 Score=128.37 Aligned_cols=120 Identities=17% Similarity=0.154 Sum_probs=60.5
Q ss_pred CcccceeEecCCCCceEEEeccc---CCcceecCc-cccCCccCcEEeCCCCcccCccCcc-cccCCCCce--EecccCc
Q 003065 60 PCGFSGITCDSVTGRVTEISFDN---KSLSGEISS-SISALQSLTVLSLPFNVLSGKLPLE-LSNCSNLKV--LNVTGNA 132 (851)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~i~~-~l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~--L~Ls~n~ 132 (851)
.|.|.|+.|+....+|+.+-..+ ..+.|.+.+ .+..++. .|+.++|.-++.++-. |...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999997766776665544 344455542 3333333 3333444444333322 444445554 5555553
Q ss_pred ccCC---CCC-CCCCCCCCeEeccCcccCC--CCcccccCccccceeecccccCC
Q 003065 133 MVGS---VPD-LSALKNLEIFDLSINYFTG--RFPRWVVNLTQLVSLSIGDNVYD 181 (851)
Q Consensus 133 l~~~---~~~-l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~ 181 (851)
.... .+. ..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 2211 111 1345566666666666654 22334444555555555555544
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93 E-value=1.6e-09 Score=118.26 Aligned_cols=140 Identities=16% Similarity=0.274 Sum_probs=104.6
Q ss_pred cCCeecccCcEEEEEEEEcCCCcEEEEEEec--ccc---cHHHHHHHHHHHHcCC--CCccccEEEEEEeC---CeeEEE
Q 003065 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLW--KGD---GVKVFAAEMEILGKIR--HRNILKLYACLLKG---GSSFLV 749 (851)
Q Consensus 680 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~---~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv 749 (851)
..+.++.|.++.||++... +..+++|+.. ... ....+.+|+++++.+. +..+++++.++.+. +..|+|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 3567899999999998863 4688899875 332 2356789999999997 45578888888766 458999
Q ss_pred EeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 003065 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC--------------------------------- 796 (851)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------- 796 (851)
|||++|..+.+. ....++...+..++.+++++|..||...
T Consensus 120 me~v~G~~l~~~-------~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQ-------SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCT-------TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCC-------ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999998766321 1224567777888999999999999620
Q ss_pred ----------------------CCCcEEeCCCCCCEEECCCCc--eEEeeecCccc
Q 003065 797 ----------------------SPPIIHRDIKSSNILLDEDYE--PKIADFGVAKI 828 (851)
Q Consensus 797 ----------------------~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~ 828 (851)
...++|+|++|.||+++.++. +.|+||+.|..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999999864
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=7e-10 Score=120.19 Aligned_cols=180 Identities=16% Similarity=0.205 Sum_probs=112.9
Q ss_pred ccCccccceeccccCccc---------cccCCcccCccccceEEecCCcCCCCCCcccccCCCCCeEecCCCcceeeCCc
Q 003065 381 YADCKTIQRLRISDNHLS---------GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPS 451 (851)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 451 (851)
...+++|+.|.+.++... +.++..+..+|+|+.|++++|.-.. .+. + .+++|+.|+|..+.++.....
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~-l~~-~-~~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS-IGK-K-PRPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-CCS-C-BCTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-ecc-c-cCCCCcEEEEecCCCChHHHH
Confidence 344556666666554321 1233444567888888888773111 222 3 267899999988887654444
Q ss_pred ccc--cCCCCcEEeccC--ccccCC-----Ccccc--ccCCcccEEEecCCcccCCCCCCc---ccccccceeeccCccc
Q 003065 452 ELG--RLTNLERLILTN--NNFSGK-----IPSAL--GALRQLSSLHLEENALTGSIPNEM---GDCARIVDLNLARNSL 517 (851)
Q Consensus 452 ~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l 517 (851)
.++ .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+....+..+ ..+++|+.|+|+.|.|
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 454 688999998863 222211 11122 247889999999988864333333 2478899999999998
Q ss_pred ccc----cCCCccccccCCeEeCCCCccccccCcccccccceEEeCcCCc
Q 003065 518 SGN----IPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQ 563 (851)
Q Consensus 518 ~~~----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~L~~l~ls~N~ 563 (851)
++. ++..+..+++|+.|+|++|.++...-..+...-...+|+++|+
T Consensus 292 ~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp BHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred ChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 873 4555567888999999999887543333332112457888776
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.65 E-value=6.5e-08 Score=103.56 Aligned_cols=137 Identities=16% Similarity=0.210 Sum_probs=98.8
Q ss_pred CCccCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCC----CccccEEEEEEeCCeeEEEEec
Q 003065 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH----RNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 677 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e~ 752 (851)
.+...+.++.|....||++ +..+++|+.........+.+|.++++.+.+ ..+++++++ +..|+||||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 4456678999999999998 567889987555545678999999998865 224455554 567899999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC------------------------------------ 796 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 796 (851)
++|.++.+... ..++......++.++++.+..||...
T Consensus 109 i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 109 IKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 99988753321 12344455566666666666666321
Q ss_pred ------------------------CCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 797 ------------------------SPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 797 ------------------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
...++|+|++|.||+++.++.+.|+||+.|...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998666799999998643
No 415
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.54 E-value=1.4e-07 Score=100.27 Aligned_cols=137 Identities=24% Similarity=0.250 Sum_probs=97.2
Q ss_pred CCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCC-CCc--cccEEEEEEeCC---eeEEEEeccC
Q 003065 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRN--ILKLYACLLKGG---SSFLVLEYMP 754 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~~ 754 (851)
.+.++.|....||++. ..+++|+.........+.+|+++++.+. +.. +++.+......+ ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4568999999999863 4688998655445677889999998883 333 344555443332 3489999999
Q ss_pred CCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 003065 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD--------------------------------------- 795 (851)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 795 (851)
|.++.+.... .++...+..++.++++.+..||..
T Consensus 100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9887643221 245556666777777777777741
Q ss_pred ----------------CCCCcEEeCCCCCCEEECC--CCceEEeeecCcccc
Q 003065 796 ----------------CSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIA 829 (851)
Q Consensus 796 ----------------~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~ 829 (851)
....++|+|++|.||++++ ...+.|+||+.+...
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1245899999999999998 456899999998653
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.44 E-value=1e-06 Score=91.61 Aligned_cols=143 Identities=20% Similarity=0.162 Sum_probs=101.0
Q ss_pred HcCCccCCeecccCcE-EEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCC-CCccccEEEEEEeCCeeEEEEec
Q 003065 675 ICNLEEDNLIGSGGTG-KVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 675 ~~~~~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 752 (851)
+.+|+. +.+..|..| .||+......+..+++|+-.. .....+.+|.+.++.+. +--+.+++.++.+.+..|+|||+
T Consensus 24 l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~ 101 (272)
T 4gkh_A 24 LYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTA 101 (272)
T ss_dssp HTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEET-HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred ccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCC-CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEe
Confidence 344443 234455554 699988776777899997543 34566889999998884 33367788999999999999999
Q ss_pred cCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------
Q 003065 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD------------------------------------- 795 (851)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------------- 795 (851)
++|.++.+..... ......++.++++.+..||..
T Consensus 102 l~G~~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 102 IPGKTAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CCSEEHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred eCCccccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9998887665431 011234556666666666631
Q ss_pred ------------------CCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 796 ------------------CSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 796 ------------------~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
....++|+|+.|.||+++.++.+-|+||+.+..
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012379999999999999877778999998864
No 417
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.43 E-value=9.2e-07 Score=93.83 Aligned_cols=137 Identities=20% Similarity=0.171 Sum_probs=90.8
Q ss_pred CCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCC---ccccEEEEEE-eCCeeEEEEeccCCC
Q 003065 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHR---NILKLYACLL-KGGSSFLVLEYMPNG 756 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~g 756 (851)
.+.++.|....||+. +..+++|+.........+.+|.++++.+.+. .+++.+.+.. ..+..|+||||++|.
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 456788888999987 4678899864434456788999999999652 3556676664 456678999999998
Q ss_pred CHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 003065 757 NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD----------------------------------------- 795 (851)
Q Consensus 757 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 795 (851)
.+.+.... .++......++.++++.+..||..
T Consensus 99 ~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 99 ILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp ECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred ECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 77652110 112222222333333333333311
Q ss_pred ----------------CCCCcEEeCCCCCCEEECC---CCc-eEEeeecCcccc
Q 003065 796 ----------------CSPPIIHRDIKSSNILLDE---DYE-PKIADFGVAKIA 829 (851)
Q Consensus 796 ----------------~~~~ivHrDlkp~NILl~~---~~~-~kl~DFGla~~~ 829 (851)
....++|+|++|.||+++. ++. +.|+||+.+...
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2456799999999999987 455 489999988643
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.42 E-value=4.5e-08 Score=100.48 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=52.0
Q ss_pred hccCCccccccc-cccCccccce--eccccCccc---cccCCcccCccccceEEecCCcCCCC--CCcccccCCCCCeEe
Q 003065 368 ALSNNFSGEVPN-SYADCKTIQR--LRISDNHLS---GKIPDGLWALPNVGMLDFGDNDFTGG--ISPLIGLSTSLSQLV 439 (851)
Q Consensus 368 l~~n~~~~~~p~-~~~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~~~~L~~L~ 439 (851)
..+|...+.++- .|...+.|.. ++++.|+.. +.++....++++|+.|+|++|+|++. ++..+..+++|+.|+
T Consensus 123 ~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~ 202 (267)
T 3rw6_A 123 KRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 202 (267)
T ss_dssp HTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEE
T ss_pred hccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEE
Confidence 334444444443 2555666666 677777543 11121223456666666666666653 234444555555555
Q ss_pred cCCCcceeeCCcccccCC--CCcEEeccCccccCCC
Q 003065 440 LQNNRFSGELPSELGRLT--NLERLILTNNNFSGKI 473 (851)
Q Consensus 440 Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~ 473 (851)
|++|+|++. ..+..+. +|++|+|++|.+.+.+
T Consensus 203 Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 203 LSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp CTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred CCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 555555533 2222222 5555555555554433
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=8.9e-09 Score=100.64 Aligned_cols=122 Identities=13% Similarity=0.103 Sum_probs=63.5
Q ss_pred ecCccccCCccCcEEeCCCC-cccCc----cCcccccCCCCceEecccCcccCCC-----CCCCCCCCCCeEeccCcccC
Q 003065 88 EISSSISALQSLTVLSLPFN-VLSGK----LPLELSNCSNLKVLNVTGNAMVGSV-----PDLSALKNLEIFDLSINYFT 157 (851)
Q Consensus 88 ~i~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~~-----~~l~~l~~L~~L~Ls~N~l~ 157 (851)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|.+...- ..+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455666777788888777 77532 3334555566777777777664311 11334455666666666554
Q ss_pred CCCcccccCccccceeecccccCCCCCCcccccCCCCCCeEec--cccccccc----CCcccccccccCcccccccccc
Q 003065 158 GRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL--AHCNLRGR----IPESISELRELGTLDICRNKIS 230 (851)
Q Consensus 158 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~L~~N~i~ 230 (851)
..... .+...+...++|++|+| ++|.+... +.+.+...++|++|+|++|.+.
T Consensus 107 ~~g~~---------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGIL---------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHH---------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHH---------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 32111 11223344445555555 55555432 1223334455666666666654
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=4e-08 Score=95.92 Aligned_cols=88 Identities=17% Similarity=0.267 Sum_probs=41.6
Q ss_pred cCCCCcEEeccCccccCC----CccccccCCcccEEEecCCcccCC----CCCCcccccccceeec--cCcccccc----
Q 003065 455 RLTNLERLILTNNNFSGK----IPSALGALRQLSSLHLEENALTGS----IPNEMGDCARIVDLNL--ARNSLSGN---- 520 (851)
Q Consensus 455 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~---- 520 (851)
..++|++|+|++|.|... +...+...+.|++|+|++|.|+.. +...+...+.|+.|+| ++|.|+..
T Consensus 63 ~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~ 142 (185)
T 1io0_A 63 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME 142 (185)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred hCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH
Confidence 334555555555555421 122233334555555555555421 2333444445555555 45555432
Q ss_pred cCCCccccccCCeEeCCCCccc
Q 003065 521 IPRSLSLLSSLNALNLSGNKLT 542 (851)
Q Consensus 521 ~p~~~~~l~~L~~L~Ls~N~l~ 542 (851)
+...+...++|+.|+|++|.+.
T Consensus 143 l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 143 IANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCcCEEeccCCCCC
Confidence 2223334456666666666664
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=2.8e-06 Score=89.02 Aligned_cols=74 Identities=18% Similarity=0.138 Sum_probs=58.1
Q ss_pred cCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCCC---ccccEEEEEEeCCeeEEEEeccC
Q 003065 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHR---NILKLYACLLKGGSSFLVLEYMP 754 (851)
Q Consensus 680 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 754 (851)
..+.++.|.++.||+++. .+|..++||+.... .....+.+|++.++.+.+. .+++++++. ..|+||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEe-CCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 356789999999999987 46788999986432 2346789999999999765 577777753 3689999999
Q ss_pred CCCH
Q 003065 755 NGNL 758 (851)
Q Consensus 755 ~gsL 758 (851)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.13 E-value=7.3e-06 Score=88.92 Aligned_cols=145 Identities=11% Similarity=0.121 Sum_probs=90.1
Q ss_pred cCCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCc--cccEEEEEEeC-CeeEEEEeccCCC
Q 003065 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYACLLKG-GSSFLVLEYMPNG 756 (851)
Q Consensus 680 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~g 756 (851)
..+.++.|....||+... ++..+++|+.... ..+.+|+.+++.+.... +++++.+.... +..|+||||++|.
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~---~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA---DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC---HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch---hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 456688999999999875 5778999977443 35889999999886543 45677776654 6789999999875
Q ss_pred CHH---------------HHHHHhhhCCCC-----------C----CCHHHH---------------------HHHHHHH
Q 003065 757 NLF---------------QALHKRVKEGKP-----------E----LDWFRR---------------------YKIALGA 785 (851)
Q Consensus 757 sL~---------------~~l~~~~~~~~~-----------~----l~~~~~---------------------~~i~~~i 785 (851)
++. +.+.+-...... . -.|... ......+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 442 111111000000 0 011111 0111112
Q ss_pred HHHHHHHHhC-CCCCcEEeCCCCCCEEECCCCceEEeeecCcccc
Q 003065 786 AKGIAYLHHD-CSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (851)
Q Consensus 786 ~~~l~~LH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 829 (851)
....+++... ....++|+|++|.||+++.++.+.|+||+.+...
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 2222233211 1256899999999999987777889999988653
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.03 E-value=4.1e-06 Score=90.96 Aligned_cols=78 Identities=9% Similarity=0.183 Sum_probs=54.8
Q ss_pred CCee-cccCcEEEEEEEEc--C----CCcEEEEEEecccc-----cHHHHHHHHHHHHcCCC---CccccEEEEEEeC--
Q 003065 681 DNLI-GSGGTGKVYRLDLK--K----NAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRH---RNILKLYACLLKG-- 743 (851)
Q Consensus 681 ~~~l-g~G~~g~Vy~~~~~--~----~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~-- 743 (851)
.+.| +.|....+|+.... . +++.+++|+..... ....+.+|+++++.+.. -.+++++.+...+
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78889999998763 1 15678899764432 12457789999988853 3467788877654
Q ss_pred -CeeEEEEeccCCCCH
Q 003065 744 -GSSFLVLEYMPNGNL 758 (851)
Q Consensus 744 -~~~~lv~e~~~~gsL 758 (851)
+..|+||||++|..+
T Consensus 105 ~g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVP 120 (357)
T ss_dssp TSSCEEEEECCCCBCC
T ss_pred cCCceEEEEecCCCCh
Confidence 457899999988654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.98 E-value=3.9e-05 Score=82.53 Aligned_cols=143 Identities=16% Similarity=0.219 Sum_probs=81.5
Q ss_pred CeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCC--CccccEEE------EEEeCCeeEEEEecc
Q 003065 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH--RNILKLYA------CLLKGGSSFLVLEYM 753 (851)
Q Consensus 682 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e~~ 753 (851)
+.++.|..+.||++... +..+++|+.... ...+..|.++++.+.. -.+++++. +....+..|+||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~--~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP--EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC--HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC--HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 34566778899998762 345899988653 3444556666665531 12333332 123467789999999
Q ss_pred CCCCHH--------------HHHHHhhhCC--C-------CCCCHHHHH-------------------------------
Q 003065 754 PNGNLF--------------QALHKRVKEG--K-------PELDWFRRY------------------------------- 779 (851)
Q Consensus 754 ~~gsL~--------------~~l~~~~~~~--~-------~~l~~~~~~------------------------------- 779 (851)
+|..+. ..++.....- . ....|...+
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986431 1122221110 0 011232110
Q ss_pred HHHHHHHHHHHHHHh----------CCCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 780 KIALGAAKGIAYLHH----------DCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 780 ~i~~~i~~~l~~LH~----------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
.+...+..++++++. .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 111123345666652 0257899999999999998888999999998853
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.92 E-value=2.7e-05 Score=85.78 Aligned_cols=74 Identities=14% Similarity=0.119 Sum_probs=49.4
Q ss_pred CCeecccCcEEEEEEEEcCCCcEEEEEEecccc---------cHHHHHHHHHHHHcCCC--C-ccccEEEEEEeCCeeEE
Q 003065 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---------GVKVFAAEMEILGKIRH--R-NILKLYACLLKGGSSFL 748 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 748 (851)
.+.+|.|..+.||+++...+++.|+||...... ..+++..|.++++.+.. + .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999765567789999764321 23456789999887742 3 34456644 3445689
Q ss_pred EEeccCCC
Q 003065 749 VLEYMPNG 756 (851)
Q Consensus 749 v~e~~~~g 756 (851)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.64 E-value=1.3e-05 Score=76.24 Aligned_cols=82 Identities=11% Similarity=0.164 Sum_probs=34.4
Q ss_pred CCCeEecccccccccCCcccccccccCcccccccc-ccccccccccCC----CcccEEEeeccC-ccCcCCcCcCCCCcc
Q 003065 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNK-ISGEFPRSIRKL----QKLWKIELYANN-LTGELPAELGNLTLL 267 (851)
Q Consensus 194 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-i~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 267 (851)
+|++||+++|.++...-..+..+++|++|+|++|. |+...-..+..+ ++|++|+|++|. |+...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34445555444443333334444444444444442 333222233332 234555555442 443222333444455
Q ss_pred cEEecccc
Q 003065 268 QEFDISSN 275 (851)
Q Consensus 268 ~~L~Ls~N 275 (851)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555444
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.59 E-value=0.001 Score=70.11 Aligned_cols=140 Identities=21% Similarity=0.260 Sum_probs=92.3
Q ss_pred CCeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCC---CCccccEEEEEEeCCeeEEEEeccCCCC
Q 003065 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSSFLVLEYMPNGN 757 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~gs 757 (851)
.+.|+.|....+|+... ++..+++|+.... ....+.+|.+.++.+. ...+++.+.+....+..|+||||+++..
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS-YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG-GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc-cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 45689999999999875 4678889976543 4667889999998884 3567888888888888999999999875
Q ss_pred HH--------HH---HHHhhhCCC-----------------CCCCHHHHH---HHHHH----------------HHHH-H
Q 003065 758 LF--------QA---LHKRVKEGK-----------------PELDWFRRY---KIALG----------------AAKG-I 789 (851)
Q Consensus 758 L~--------~~---l~~~~~~~~-----------------~~l~~~~~~---~i~~~----------------i~~~-l 789 (851)
+. +. ++....... -.-+|.... ++..+ +++. .
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 41 22 222111000 012454332 11111 1111 1
Q ss_pred HHHH-hCCCCCcEEeCCCCCCEEECCCCceEEeeec
Q 003065 790 AYLH-HDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (851)
Q Consensus 790 ~~LH-~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 824 (851)
..|. ....+.++|+|+.+.|++++.++ +.|+||+
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2332 12246899999999999999887 9999984
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.54 E-value=1.7e-05 Score=75.35 Aligned_cols=83 Identities=18% Similarity=0.111 Sum_probs=46.5
Q ss_pred cccCccccccccccccccccccCCCcccEEEeeccC-ccCcCCcCcCCC----CcccEEeccccc-ccCCCCccccCcCC
Q 003065 217 RELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN-LTGELPAELGNL----TLLQEFDISSNQ-MYGKLPEEIGNLKN 290 (851)
Q Consensus 217 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~ 290 (851)
.+|+.||++++.|+...-..+.++++|++|+|++|. |++..-..+..+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356777777777665555556666677777777663 554333333333 256666666653 54333334445555
Q ss_pred ccEEEccCC
Q 003065 291 LTVFQCFKN 299 (851)
Q Consensus 291 L~~L~l~~N 299 (851)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.44 E-value=0.00047 Score=76.41 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=45.0
Q ss_pred CCeecccCcEEEEEEEEcCCCcEEEEEEec-------cc-c---cHHHHHHHHHHHHc-CCCCccccEEEEEEeCCeeEE
Q 003065 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLW-------KG-D---GVKVFAAEMEILGK-IRHRNILKLYACLLKGGSSFL 748 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~-------~~-~---~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~l 748 (851)
.+.+|.|..+.||++.. +++.++||... .. . ....++.|+..+.. ..+..+++++.+. .+..++
T Consensus 39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 45688999999999964 56789999321 11 1 23334444433322 2334566777765 566799
Q ss_pred EEecc-CC
Q 003065 749 VLEYM-PN 755 (851)
Q Consensus 749 v~e~~-~~ 755 (851)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.24 E-value=0.00056 Score=72.70 Aligned_cols=145 Identities=14% Similarity=0.132 Sum_probs=80.3
Q ss_pred CeecccCcEEEEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCCCc--cccEEEE------EEeCCeeEEEEecc
Q 003065 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYAC------LLKGGSSFLVLEYM 753 (851)
Q Consensus 682 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~e~~ 753 (851)
+.++.|....+|++... +..+++|+.........+..|+++++.+.... +++++.. ....+..++||||+
T Consensus 28 ~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTT--KDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEES--SCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeC--CccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 45677888899998763 33688998765333345667888887774222 2333321 22346779999999
Q ss_pred CCCCHH-----------H---HHHHhhhC-CCC---CC---CHHHHHH------------HHHHHHHHHHHHHhC----C
Q 003065 754 PNGNLF-----------Q---ALHKRVKE-GKP---EL---DWFRRYK------------IALGAAKGIAYLHHD----C 796 (851)
Q Consensus 754 ~~gsL~-----------~---~l~~~~~~-~~~---~l---~~~~~~~------------i~~~i~~~l~~LH~~----~ 796 (851)
+|..+. + .++..... ..+ .. .|..... +...+.+.+++++.. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 875431 1 12221110 001 01 1221110 001134445555531 1
Q ss_pred CCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 797 SPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 797 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
..+++|+|+++.||+++.++.+.++||+.+..
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 35799999999999999876668999998753
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.15 E-value=0.00093 Score=69.77 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=53.4
Q ss_pred ccCCeecccCcEEEEEEEEcCCCcEEEEEEeccc--ccHHHHHHHHHHHHcCCC---CccccEEEEEEeCCeeEEEEecc
Q 003065 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRH---RNILKLYACLLKGGSSFLVLEYM 753 (851)
Q Consensus 679 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e~~ 753 (851)
...+.+|.|..+.||+.+. .+|+.|.||+.... .....|.+|++.|+.+.- --+++.+++ +..++||||+
T Consensus 18 ~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l 92 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred EEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence 3456789999999999987 57889999986433 223467899999998842 234455553 2347899999
Q ss_pred CCCCH
Q 003065 754 PNGNL 758 (851)
Q Consensus 754 ~~gsL 758 (851)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87643
No 432
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.08 E-value=0.0008 Score=74.53 Aligned_cols=72 Identities=19% Similarity=0.283 Sum_probs=49.6
Q ss_pred CCeecccCcEEEEEEEEcC-------CCcEEEEEEecccccHHHHHHHHHHHHcCCCCcc-ccEEEEEEeCCeeEEEEec
Q 003065 681 DNLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~ 752 (851)
.+.|+.|-...||++.... .++.+++|+.........+.+|..+++.+...++ +++++.+.. .+|+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 3467888889999998743 2467899987442222566689999988854344 567766542 389999
Q ss_pred cCCC
Q 003065 753 MPNG 756 (851)
Q Consensus 753 ~~~g 756 (851)
++|.
T Consensus 154 l~G~ 157 (429)
T 1nw1_A 154 IPSR 157 (429)
T ss_dssp CCEE
T ss_pred eCCc
Confidence 9863
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.06 E-value=0.002 Score=68.61 Aligned_cols=143 Identities=17% Similarity=0.188 Sum_probs=82.1
Q ss_pred CeecccCcEEEEEEEEcCCCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCc--cccEEEE-----EEeCCeeEEEEecc
Q 003065 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN--ILKLYAC-----LLKGGSSFLVLEYM 753 (851)
Q Consensus 682 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~e~~ 753 (851)
+.++ |....||++.. .+|+.+++|+.... .....+..|..+++.+.... +++++.. ...++..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4466 77789998765 34567999988643 34567778888888774222 3333332 23356778999999
Q ss_pred CCCCHH-----H------H---HHHhhhC----CCCCCCHHHHH----HH---------------HHHHHHHHHHHHhC-
Q 003065 754 PNGNLF-----Q------A---LHKRVKE----GKPELDWFRRY----KI---------------ALGAAKGIAYLHHD- 795 (851)
Q Consensus 754 ~~gsL~-----~------~---l~~~~~~----~~~~l~~~~~~----~i---------------~~~i~~~l~~LH~~- 795 (851)
+|..+. . . ++..... .....++.... .+ ...+.+.++.+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 874321 1 1 1211111 01122222110 00 01111223333211
Q ss_pred ---CCCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 796 ---CSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 796 ---~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
....++|+|+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 245689999999999999 4 899999988754
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.99 E-value=0.0012 Score=69.36 Aligned_cols=71 Identities=15% Similarity=0.111 Sum_probs=45.3
Q ss_pred cCCeecccCcEEEEEEEEcCCCcEEEEEEeccccc-HHHHHHHHHHHHcCCCCcc-ccEEEEEEeCCeeEEEEecc-CCC
Q 003065 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG-VKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEYM-PNG 756 (851)
Q Consensus 680 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g 756 (851)
-.+.|+.|....+|++ ..+++|+...... .....+|+.+++.+....+ +++++.. .+.-++|+||+ +|.
T Consensus 22 ~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQ 93 (301)
T ss_dssp SCEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCE
T ss_pred ceeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCc
Confidence 3678889999999998 4688887654311 1123568888887753333 4566543 33357899999 654
Q ss_pred CH
Q 003065 757 NL 758 (851)
Q Consensus 757 sL 758 (851)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.92 E-value=0.00016 Score=69.89 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=27.9
Q ss_pred CCCCeEecCCCcceeeCC----cccccCCCCcEEeccCcc---ccC----CCccccccCCcccEEEecCCcc
Q 003065 433 TSLSQLVLQNNRFSGELP----SELGRLTNLERLILTNNN---FSG----KIPSALGALRQLSSLHLEENAL 493 (851)
Q Consensus 433 ~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~---l~~----~~p~~~~~l~~L~~L~Ls~N~l 493 (851)
+.|+.|+|++|+|+..-- +.+..-+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.+
T Consensus 98 ~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 98 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 445555555555543221 222233456666665442 221 1222334445666666665554
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.84 E-value=0.0042 Score=66.24 Aligned_cols=144 Identities=14% Similarity=0.137 Sum_probs=74.3
Q ss_pred CeecccCcEE-EEEEEEcCCCcEEEEEEecccccHHHHHHHHHHHHcCCC--CccccEEEEEEeCCeeEEEEeccCCCCH
Q 003065 682 NLIGSGGTGK-VYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH--RNILKLYACLLKGGSSFLVLEYMPNGNL 758 (851)
Q Consensus 682 ~~lg~G~~g~-Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL 758 (851)
+.++.|+... +|+... .+++.+++|...... ...+..|+++++.+.. -.+++++.+....+ ++|||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~-~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE-GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEEC-TTCCEEEEEECCTTT-TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC-CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 3455554444 667653 235677777653321 1334567777777642 23556676543333 789999977777
Q ss_pred HHHHHHhhh------------------C---CCCCCCHHHHH---------H-----------HHHHHHHHHHHHHh---
Q 003065 759 FQALHKRVK------------------E---GKPELDWFRRY---------K-----------IALGAAKGIAYLHH--- 794 (851)
Q Consensus 759 ~~~l~~~~~------------------~---~~~~l~~~~~~---------~-----------i~~~i~~~l~~LH~--- 794 (851)
.+++..... . ..+.++..... . ....+...++.+..
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 655432100 0 01112211100 0 00111122233311
Q ss_pred CCCCCcEEeCCCCCCEEECCC----CceEEeeecCcccc
Q 003065 795 DCSPPIIHRDIKSSNILLDED----YEPKIADFGVAKIA 829 (851)
Q Consensus 795 ~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~~ 829 (851)
.....++|+|+.+.||+++.+ +.+.|+||+.+...
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 124689999999999999874 67999999988643
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.83 E-value=0.0015 Score=58.89 Aligned_cols=62 Identities=26% Similarity=0.326 Sum_probs=38.8
Q ss_pred eeeccCcccc-cccCCCccccccCCeEeCCCCccccccCcccccc-cceEEeCcCCcccccCCccc
Q 003065 509 DLNLARNSLS-GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDF 572 (851)
Q Consensus 509 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~L~~l~ls~N~l~~~~p~~~ 572 (851)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+ .|+.|+|++|+|.|++-..|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~ 75 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVP 75 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHH
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHH
Confidence 4555555554 23443322 257778888888874333445666 78888888888888876543
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.78 E-value=0.00029 Score=68.17 Aligned_cols=89 Identities=10% Similarity=0.156 Sum_probs=60.1
Q ss_pred ccCCCCCeEecCCCcceeeCCcc----cccCCCCcEEeccCccccCC----CccccccCCcccEEEecCC---cccC---
Q 003065 430 GLSTSLSQLVLQNNRFSGELPSE----LGRLTNLERLILTNNNFSGK----IPSALGALRQLSSLHLEEN---ALTG--- 495 (851)
Q Consensus 430 ~~~~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~--- 495 (851)
..-+.|+.|+|++|+|....... +..-+.|+.|+|++|.|+.. +-.++..-+.|+.|+|++| .+..
T Consensus 67 ~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~ 146 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 146 (197)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHH
Confidence 34467888888888886443333 34458899999999999743 2334555677999999865 3332
Q ss_pred -CCCCCcccccccceeeccCcccc
Q 003065 496 -SIPNEMGDCARIVDLNLARNSLS 518 (851)
Q Consensus 496 -~~p~~~~~l~~L~~L~Ls~N~l~ 518 (851)
.+...+..-+.|+.|+++.|.+.
T Consensus 147 ~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 147 MDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHhCCCcCeEeccCCCcc
Confidence 13334455678999999888654
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.74 E-value=0.0031 Score=68.23 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=82.4
Q ss_pred CCeecccCcEEEEEEEEcC-------CCcEEEEEEeccc-ccHHHHHHHHHHHHcCCCCc-cccEEEEEEeCCeeEEEEe
Q 003065 681 DNLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN-ILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e 751 (851)
.+.+..|-...+|++.... +++.|++|+.-.. .......+|.++++.+.... .+++++++.. .+|||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 3456678788899988742 3467999985322 24566779999998885333 3557766543 28999
Q ss_pred ccCCCCHH--------------HHHHHhhhCC---CCCCC--HHHHHHHHHHHH-------------------HHHHHHH
Q 003065 752 YMPNGNLF--------------QALHKRVKEG---KPELD--WFRRYKIALGAA-------------------KGIAYLH 793 (851)
Q Consensus 752 ~~~~gsL~--------------~~l~~~~~~~---~~~l~--~~~~~~i~~~i~-------------------~~l~~LH 793 (851)
|++|..+. +.+.+-.... ..... +.++.++..++. ..+.++.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 99875432 1111111100 11122 333333333321 1233332
Q ss_pred h-----CCCCCcEEeCCCCCCEEECCC----CceEEeeecCccc
Q 003065 794 H-----DCSPPIIHRDIKSSNILLDED----YEPKIADFGVAKI 828 (851)
Q Consensus 794 ~-----~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~ 828 (851)
. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 123479999999999999876 7899999998863
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.50 E-value=0.0038 Score=56.30 Aligned_cols=56 Identities=25% Similarity=0.340 Sum_probs=35.9
Q ss_pred EEEecCCccc-CCCCCCcccccccceeeccCcccccccCCCccccccCCeEeCCCCccc
Q 003065 485 SLHLEENALT-GSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (851)
Q Consensus 485 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (851)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5566666664 24443332 34667777777777555566777777888888888775
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.32 E-value=0.0075 Score=67.03 Aligned_cols=73 Identities=15% Similarity=0.123 Sum_probs=47.1
Q ss_pred CCeecccCcEEEEEEEEcCCCcEEEEEEecccc-cHHHHHHHHHHHHcCCCCcc-ccEEEEEEeCCeeEEEEeccCCCC
Q 003065 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEYMPNGN 757 (851)
Q Consensus 681 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 757 (851)
.+.|+.|-...+|++.....+..+++|+..... ..-+..+|..+++.+...++ +++++++. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 456788888999999875435778899764321 11112589999998865445 45777763 2 25999998743
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.11 E-value=0.005 Score=66.70 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=43.2
Q ss_pred CeecccCcEEEEEEEEcC--------CCcEEEEEEeccccc-HHHHHHHHHHHHcCCCCc-cccEEEEEEeCCeeEEEEe
Q 003065 682 NLIGSGGTGKVYRLDLKK--------NAGTVAVKQLWKGDG-VKVFAAEMEILGKIRHRN-ILKLYACLLKGGSSFLVLE 751 (851)
Q Consensus 682 ~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e 751 (851)
+.++.|....+|++.... .++.+++|+...... ......|.++++.+.... ++++++.+ . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 456778888999998643 126788887643311 112357888888875333 44676554 2 268999
Q ss_pred ccCCCC
Q 003065 752 YMPNGN 757 (851)
Q Consensus 752 ~~~~gs 757 (851)
|++|..
T Consensus 115 ~i~G~~ 120 (369)
T 3c5i_A 115 WLYGDP 120 (369)
T ss_dssp CCCSEE
T ss_pred EecCCc
Confidence 998753
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.66 E-value=0.037 Score=58.99 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=28.2
Q ss_pred CCCcEEeCCCCCCEEECCCCceEEeeecCccc
Q 003065 797 SPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (851)
Q Consensus 797 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 828 (851)
...++|+|+.+.||+++.++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999988754
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.23 E-value=0.033 Score=60.45 Aligned_cols=143 Identities=16% Similarity=0.147 Sum_probs=79.6
Q ss_pred CeecccCcEEEEEEEEcC-------CCcEEEEEEeccccc-------------H-------HHHHHHHHHHHcCC-CCcc
Q 003065 682 NLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKGDG-------------V-------KVFAAEMEILGKIR-HRNI 733 (851)
Q Consensus 682 ~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~-------------~-------~~~~~E~~~l~~l~-h~ni 733 (851)
+.+..|-...+|++.... ....|.+++.-...+ + +....|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 345567778899887642 135788887532211 0 12235888888885 3334
Q ss_pred ccEEEEEEeCCeeEEEEeccCCCCHH--------------HHHHHhhhC---CCCCCC--HHHHHHHHHHHH--------
Q 003065 734 LKLYACLLKGGSSFLVLEYMPNGNLF--------------QALHKRVKE---GKPELD--WFRRYKIALGAA-------- 786 (851)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~--------------~~l~~~~~~---~~~~l~--~~~~~~i~~~i~-------- 786 (851)
+++++++..+ +|+||++|.+|. ..+.+.... -..... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776432 899999864431 111111011 011122 222222322221
Q ss_pred --------------HHHH----HHHh-CCCCCcEEeCCCCCCEEECCC------CceEEeeecCccc
Q 003065 787 --------------KGIA----YLHH-DCSPPIIHRDIKSSNILLDED------YEPKIADFGVAKI 828 (851)
Q Consensus 787 --------------~~l~----~LH~-~~~~~ivHrDlkp~NILl~~~------~~~kl~DFGla~~ 828 (851)
.-+. ++.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 2221 123478999999999999876 7899999988753
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.05 E-value=0.09 Score=57.55 Aligned_cols=72 Identities=13% Similarity=0.098 Sum_probs=46.0
Q ss_pred CeecccCcEEEEEEEEcCC-------CcEEEEEEecccc-cHHHHHHHHHHHHcCCCCc-cccEEEEEEeCCeeEEEEec
Q 003065 682 NLIGSGGTGKVYRLDLKKN-------AGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRN-ILKLYACLLKGGSSFLVLEY 752 (851)
Q Consensus 682 ~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~ 752 (851)
+.+..|-...+|++..... ++.|++|+..... ..-+..+|.++++.+.... .+++++.+ . -++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 4566677788999887421 5778898764321 1112357888888885333 34566533 2 2789999
Q ss_pred cCCCC
Q 003065 753 MPNGN 757 (851)
Q Consensus 753 ~~~gs 757 (851)
++|..
T Consensus 152 I~G~~ 156 (424)
T 3mes_A 152 IDGEP 156 (424)
T ss_dssp CCSEE
T ss_pred eCCcc
Confidence 98865
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.39 E-value=0.42 Score=51.99 Aligned_cols=30 Identities=30% Similarity=0.430 Sum_probs=25.0
Q ss_pred CcEEeCCCCCCEEE------CCCCceEEeeecCccc
Q 003065 799 PIIHRDIKSSNILL------DEDYEPKIADFGVAKI 828 (851)
Q Consensus 799 ~ivHrDlkp~NILl------~~~~~~kl~DFGla~~ 828 (851)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4456799999998853
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=78.18 E-value=6.2 Score=38.27 Aligned_cols=87 Identities=13% Similarity=0.102 Sum_probs=61.7
Q ss_pred CCCccccEEEEEEeCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCcEEeCCCC
Q 003065 729 RHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIA-YLHHDCSPPIIHRDIKS 807 (851)
Q Consensus 729 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivHrDlkp 807 (851)
.||++ -...-.+.+...+.++.-+++.=+..++ ..+...+++++..++.... +++ .-+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeC
Confidence 57777 3333466677777776554443334443 3577788888888887665 444 567889999
Q ss_pred CCEEECCCCceEEeeecCccccC
Q 003065 808 SNILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 808 ~NILl~~~~~~kl~DFGla~~~~ 830 (851)
+||++|.++.+++.-.|+-..+.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~lp 135 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESLP 135 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTBS
T ss_pred ceEEEeCCCcEEEEEcCCcccCC
Confidence 99999999999999999865443
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.64 E-value=0.31 Score=54.06 Aligned_cols=59 Identities=8% Similarity=-0.034 Sum_probs=17.3
Q ss_pred cCCeecccCcEEEEEEEEcCCCcEEEE------EEeccc----ccHHHHHHHHHHHHcCCCCccccEEEEEE
Q 003065 680 EDNLIGSGGTGKVYRLDLKKNAGTVAV------KQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLL 741 (851)
Q Consensus 680 ~~~~lg~G~~g~Vy~~~~~~~~~~vav------K~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 741 (851)
..+.+| ||.||++.+.....+||| |..... +....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 445566 999999998665567888 665432 23346788999999999999999877654
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=70.99 E-value=4 Score=39.47 Aligned_cols=88 Identities=8% Similarity=0.035 Sum_probs=61.8
Q ss_pred CCCccccEEEEEEeCCeeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEeCCCCC
Q 003065 729 RHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSS 808 (851)
Q Consensus 729 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlkp~ 808 (851)
.||+++.. ..-...+.+.+.++.-+.+-=+..+ ...+...+++++..|+...++++ .-+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i--------k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI--------KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG--------GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH--------HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecc
Confidence 57888866 4555566666666544322111112 24677888999999988876666 3478899999
Q ss_pred CEEECCCCceEEeeecCccccC
Q 003065 809 NILLDEDYEPKIADFGVAKIAE 830 (851)
Q Consensus 809 NILl~~~~~~kl~DFGla~~~~ 830 (851)
||+++.++.+++.-.|+...+.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBS
T ss_pred eEEEcCCCCEEEEEccCccCCC
Confidence 9999999999999999765443
No 450
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=62.18 E-value=46 Score=37.56 Aligned_cols=46 Identities=22% Similarity=0.119 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHH--HHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 775 WFRRYKIALGAAK--GIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 775 ~~~~~~i~~~i~~--~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
+..+..++..+|- .+-|+= || +|=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4455556555443 455555 33 6889999999999999999999874
No 451
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=38.44 E-value=61 Score=37.22 Aligned_cols=44 Identities=25% Similarity=0.177 Sum_probs=31.9
Q ss_pred HHHHHHHHHH--HHHHHHHhCCCCCcEEeCCCCCCEEECCCCceEEeeecCcc
Q 003065 777 RRYKIALGAA--KGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (851)
Q Consensus 777 ~~~~i~~~i~--~~l~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 827 (851)
.+..++..+| ..+.|+= || +|=+++||||+.+|.+.-+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YIL-----Gl--GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLL-----GV--GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHc-----cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence 3445555444 2344554 33 7889999999999999999999874
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.35 E-value=1.5e+02 Score=24.41 Aligned_cols=37 Identities=30% Similarity=0.333 Sum_probs=14.8
Q ss_pred ccccCCCCCeEecCCCcceeeCCcccccCCCCcEEecc
Q 003065 428 LIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (851)
Q Consensus 428 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 465 (851)
.|..+++|+.+.+..+ ++.+-..+|.++.+|+.+.+.
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 3444444444444332 222333344444444444443
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.11 E-value=1.7e+02 Score=24.03 Aligned_cols=13 Identities=15% Similarity=0.345 Sum_probs=5.3
Q ss_pred CcCCCCcccEEec
Q 003065 260 ELGNLTLLQEFDI 272 (851)
Q Consensus 260 ~~~~l~~L~~L~L 272 (851)
+|.++++|+.+.|
T Consensus 15 aF~~c~~L~~i~i 27 (100)
T 2lz0_A 15 LFAGNTVIREITV 27 (100)
T ss_dssp TTTTCTTCCCEEE
T ss_pred HhcCCCCCcEEEc
Confidence 3344444444433
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.15 E-value=1.6e+02 Score=30.41 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=42.2
Q ss_pred eeEEEEeccCCCCHHHHHHHhhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-cE-EeCCCCCCEEECCCC-ceEEe
Q 003065 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP-II-HRDIKSSNILLDEDY-EPKIA 821 (851)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-iv-HrDlkp~NILl~~~~-~~kl~ 821 (851)
...++|||.+|..|.+.-.... ...+.......+. -+-++.+..+..++- .+ +.--.|+|||+++++ .+.++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~---~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I 230 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA---PEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI 230 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH---HHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred cceehhhhcCCCccccchhhhh---hhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence 4569999998765532211000 0012222222111 123455555443332 21 123578999998655 49999
Q ss_pred eecCccccC
Q 003065 822 DFGVAKIAE 830 (851)
Q Consensus 822 DFGla~~~~ 830 (851)
|-+.|..-.
T Consensus 231 Dhn~af~~~ 239 (342)
T 1cja_A 231 DSKIIPLDA 239 (342)
T ss_dssp SCCCCCCCS
T ss_pred cCCccccCC
Confidence 999986543
Done!