BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003068
(851 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 80/210 (38%), Gaps = 27/210 (12%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR----QGHSSSMSRSV 563
D C VC G ++LC+ CP A+H CLDP L PE W CP+C Q
Sbjct: 344 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEE 403
Query: 564 DLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEI 623
+ G E + C +C+ D ++ CD C +H+ CL L EI
Sbjct: 404 EEGGCEEEEDDHMEFCRVCK---------DGGELLCCDACPSSYHLHCLNP----PLPEI 450
Query: 624 PKDKWFCCD-DCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMND----- 677
P +W C C + +Q + R PA + + +E + +
Sbjct: 451 PNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPSLPPPKPLEGIPERE 510
Query: 678 --VQWQMLKKAQCFEEKEKSLLSSATAIFR 705
V+W L C KE L T ++R
Sbjct: 511 FFVKWAGLSYWHCSWVKELQLELYHTVMYR 540
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 567
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 364 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 423
Query: 568 GLEAPGAEVGG------------CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKN 615
E EVGG C +C+ D ++ CD C +H+ CL
Sbjct: 424 --EEILEEVGGDPEEEDDHHMEFCRVCK---------DGGELLCCDTCPSSYHIHCLNP- 471
Query: 616 GLCDLKEIPKDKWFC 630
L EIP +W C
Sbjct: 472 ---PLPEIPNGEWLC 483
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+ C VC DG LL C+ CP ++H CL+P L IP W CP C
Sbjct: 443 EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 567
D C VC G ++LC+ CP A+H CLDP + PE W CP+C + ++ + +G
Sbjct: 371 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 430
Query: 568 GLEAPGAEVGG------------CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKN 615
E EVGG C +C+ D ++ CD C +H+ CL
Sbjct: 431 --EEILEEVGGDLEEEDDHHMEFCRVCK---------DGGELLCCDTCPSSYHIHCLNP- 478
Query: 616 GLCDLKEIPKDKWFC 630
L EIP +W C
Sbjct: 479 ---PLPEIPNGEWLC 490
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+ C VC DG LL C+ CP ++H CL+P L IP W CP C
Sbjct: 450 EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 23/131 (17%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ--------GHSSSM 559
D C VC G ++LC+ CP A+H CLDP L PE W CP+C +
Sbjct: 380 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEY 439
Query: 560 SRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCD 619
+ +G E + C +C+ D ++ CD C +H+ CL
Sbjct: 440 EEEGEEEGEKEEEDDHMEYCRVCK---------DGGELLCCDACISSYHIHCLNP----P 486
Query: 620 LKEIPKDKWFC 630
L +IP +W C
Sbjct: 487 LPDIPNGEWLC 497
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+ C VC DG LL C+ C ++H CL+P L IP W CP C
Sbjct: 457 EYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 512 CHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKGGL 569
C VC L+LC+ C A+H AC+D + PE W CP+C + H + L
Sbjct: 268 CEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEE-HGPDV-----LIVEE 321
Query: 570 EAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWF 629
E A + C IC+ + ++ CD C +H C+ L EIP+ +W
Sbjct: 322 EPAKANMDYCRICK---------ETSNILLCDTCPSSYHAYCIDP----PLTEIPEGEWS 368
Query: 630 C 630
C
Sbjct: 369 C 369
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
D C +C + N+LLC+ CP ++HA C+DP L IPE W CP C
Sbjct: 329 DYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 24/123 (19%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDLKG 567
D C VC G ++LC+ CP A+H CL+P L PE W CP+C ++ D
Sbjct: 378 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGGAAEEEDDDEHQ 437
Query: 568 GLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDK 627
C +C+ D ++ CD C +H CL L IP
Sbjct: 438 EF---------CRVCK---------DGGELLCCDSCPSAYHTFCLNP----PLDTIPDGD 475
Query: 628 WFC 630
W C
Sbjct: 476 WRC 478
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 510 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+ C VC DG LL C+ CP A+H CL+P L IP+ WRCP C
Sbjct: 438 EFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC 481
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 511 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 562
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1429 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1488
Query: 563 VDLKGGLE--APGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDL 620
+ + P A + C IC A ++ +I C CE+ H GC D+
Sbjct: 1489 CEWQNSYTHCGPCASLVTCPICH-----APYVEEDLLIQCRHCERWMHAGCESLFTEDDV 1543
Query: 621 KEIPKDKWFCCDDCN 635
++ D+ F C C
Sbjct: 1544 EQA-ADEGFDCVSCQ 1557
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 42/143 (29%)
Query: 512 CHVC-GDGE--NLLLCNGCPLAFHAACLDPLLIP--ESGWRCPNCRQGHSSSMSRSVDLK 566
C VC G GE +L C C +H ACLD L +GW+CP C+
Sbjct: 229 CAVCEGPGELCDLFFCTSCGHHYHGACLDTALTARKRAGWQCPECKV------------- 275
Query: 567 GGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKD 626
C CR +D ++ C+ C+K +H CL+ ++E+P
Sbjct: 276 ------------CQACRKPG------NDSKMLVCETCDKGYHTFCLKP----PMEELPAH 313
Query: 627 KWFC--CDDCNRIHAALQDFVSN 647
W C C C A + N
Sbjct: 314 SWKCKACRVCRACGAGSAELNPN 336
Score = 40.4 bits (93), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 51/148 (34%)
Query: 510 DMCHVCG------DGENLLLCNGCPLAFHAACLDP-----LLIPESGWRCPNCRQGHSSS 558
DMC VCG +G +LL C+ C +H C++ +L+ GWRC
Sbjct: 1378 DMCVVCGSFGRGAEG-HLLACSQCSQCYHPYCVNSKITKVMLL--KGWRC---------- 1424
Query: 559 MSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLC 618
V+ C++C + D ++ CD C+ +H CL
Sbjct: 1425 ----VE--------------CIVC---EVCGQASDPSRLLLCDDCDISYHTYCLDP---- 1459
Query: 619 DLKEIPKDKWFC--CDDCNRIHAALQDF 644
L +PK W C C C + AA F
Sbjct: 1460 PLLTVPKGGWKCKWCVSCMQCGAASPGF 1487
Score = 39.7 bits (91), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 484 TSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC------GDGENLLLCNGCPLAFHAACLD 537
TS G H + A+ R+ G C VC G+ +L+C C +H CL
Sbjct: 245 TSCGHHYHGACLDTALTARKRAGWQCPECKVCQACRKPGNDSKMLVCETCDKGYHTFCLK 304
Query: 538 PLL--IPESGWRCPNCR 552
P + +P W+C CR
Sbjct: 305 PPMEELPAHSWKCKACR 321
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 508 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQG 554
++D C VC DG L+ C+GCP AFH ACL P L IP WRC C QG
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQG 345
Score = 37.4 bits (85), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 583 RSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC-CDDCNRIHAAL 641
++ D A D +I CD C + FH+ CL L+EIP W C C R+ L
Sbjct: 296 KNEDECAVCHDGGELICCDGCPRAFHLACLSP----PLQEIPSGLWRCSCCLQGRVQQNL 351
Query: 642 QDFVSNRAQTIPASS 656
+R +PA +
Sbjct: 352 SQPEVSRPPELPAET 366
Score = 37.0 bits (84), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 512 CHVCGDGENLLLCNGCPLAFHAACLDPLLI--PESGWRCPNCRQGHSS---SMSRSVDLK 566
C VCGDG +L C C AFH C P P + RC +C + + +V
Sbjct: 434 CSVCGDGTEVLRCAHCAAAFHWRCHFPTAAARPGTNLRCKSCSADSTPTPGTPGEAVPTS 493
Query: 567 GGLEAPG-AEVG 577
G APG A+VG
Sbjct: 494 GPRPAPGLAKVG 505
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 508 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 553
++D C VC DG L+ C+GCP AFH ACL P L IP WRC +C Q
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 342
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 489 TLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLI--PESGW 546
LH + GQ+ G+ C VCGDG ++L C C AFH C P P +G
Sbjct: 413 ALHPLLCVGPEGQQNLAPGA--RCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGL 470
Query: 547 RCPNC 551
RC +C
Sbjct: 471 RCRSC 475
Score = 37.0 bits (84), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 13/52 (25%)
Query: 579 CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 630
C +CR D +I CD C + FH+ CL L+EIP W C
Sbjct: 299 CAVCR---------DGGELICCDGCPRAFHLACLSPP----LREIPSGTWRC 337
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 23/132 (17%)
Query: 508 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSVDL 565
++D C C LLLC+ CP A+H C+D + PE W C +C + H + +
Sbjct: 255 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIE-HGPEVVKEEPA 313
Query: 566 KGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPK 625
K E C IC+ + ++ CD C FH C+ L E+PK
Sbjct: 314 KQNDEF-------CKICK---------ETENLLLCDSCVCSFHAYCIDP----PLTEVPK 353
Query: 626 DKWFCCDDCNRI 637
++ + C C +
Sbjct: 354 EETWSCPRCETV 365
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 511 MCHVCG---DGENLLLCNGCPLAFHAACLDP--LLIPESGWRCP---NCRQGHSSSMSRS 562
+C VCG D LLLC+ C +++H CLDP L +P+ GW+C +C Q ++S
Sbjct: 1385 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFH 1444
Query: 563 VDLKGGLE--APGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGC 611
+ + P A + C +C A ++ +I C CE+ H GC
Sbjct: 1445 CEWQNSYTHCGPCASLVTCPVCH-----APYVEEDLLIQCRHCERWMHAGC 1490
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 40/124 (32%)
Query: 512 CHVC-GDGE--NLLLCNGCPLAFHAACLDPLLIP--ESGWRCPNCRQGHSSSMSRSVDLK 566
C VC G G+ +LL C C +H ACLD L + W+CP C+
Sbjct: 229 CAVCEGPGQLCDLLFCTSCGHHYHGACLDTALTARKRASWQCPECKV------------- 275
Query: 567 GGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKD 626
C CR +D ++ C+ C+K +H CL+ ++++P
Sbjct: 276 ------------CQSCRKPG------NDSKMLVCETCDKGYHTFCLKP----PMEDLPAH 313
Query: 627 KWFC 630
W C
Sbjct: 314 SWKC 317
Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 51/148 (34%)
Query: 510 DMCHVCG------DGENLLLCNGCPLAFHAACLDP-----LLIPESGWRCPNCRQGHSSS 558
DMC VCG +G +LL C+ C +H C++ +L+ GWRC
Sbjct: 1334 DMCVVCGSFGRGAEG-HLLACSQCSQCYHPYCVNSKITKVMLL--KGWRC---------- 1380
Query: 559 MSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLC 618
V+ C++C + D ++ CD C+ +H CL
Sbjct: 1381 ----VE--------------CIVC---EVCGQASDPSRLLLCDDCDISYHTYCLDP---- 1415
Query: 619 DLKEIPKDKWFC--CDDCNRIHAALQDF 644
L +PK W C C C + AA F
Sbjct: 1416 PLLTVPKGGWKCKWCVSCMQCGAASPGF 1443
Score = 37.7 bits (86), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 484 TSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC------GDGENLLLCNGCPLAFHAACLD 537
TS G H + A+ R+ C VC G+ +L+C C +H CL
Sbjct: 245 TSCGHHYHGACLDTALTARKRASWQCPECKVCQSCRKPGNDSKMLVCETCDKGYHTFCLK 304
Query: 538 PLL--IPESGWRCPNCR 552
P + +P W+C CR
Sbjct: 305 PPMEDLPAHSWKCKTCR 321
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 511 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCP---NCRQGHSSSMSRS 562
+C CG D LLLC+ C +++H CLDP L +P+ GW+C CR ++S
Sbjct: 1009 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSAGLR 1068
Query: 563 VDLKGGLE--APGAEVGGCVIC----RSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNG 616
+ + AP A + C +C R D ++ C QC++ H C N
Sbjct: 1069 CEWQNNYTQCAPCASLSSCPVCYRNYREEDL---------ILQCRQCDRWMHAVCQNLNT 1119
Query: 617 LCDLKEIPKDKWFCCDDC 634
+++ + D F C C
Sbjct: 1120 EEEVENV-ADIGFDCSMC 1136
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 484 TSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC------GDGENLLLCNGCPLAFHAACLD 537
T+ G H + + +A+ + G C VC G+ +L+C+ C +H CL
Sbjct: 360 TTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQ 419
Query: 538 PLL--IPESGWRCPNCR 552
P++ +P +GW+C NCR
Sbjct: 420 PVMKSVPTNGWKCKNCR 436
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 40/127 (31%)
Query: 509 DDMCHVC---GDGENLLLCNGCPLAFHAACLDPLLIP--ESGWRCPNCRQGHSSSMSRSV 563
D C VC GD + C C +H CLD + P +GW+CP C+
Sbjct: 341 DANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKV---------- 390
Query: 564 DLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEI 623
C C+ + +D ++ CD C+K +H CL+ +K +
Sbjct: 391 ---------------CQNCKQ------SGEDSKMLVCDTCDKGYHTFCLQPV----MKSV 425
Query: 624 PKDKWFC 630
P + W C
Sbjct: 426 PTNGWKC 432
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 51/185 (27%)
Query: 489 TLHDIAISLAMGQRRTTGGSDDMCHVCGD-GEN----LLLCNGCPLAFHAACLD---PLL 540
++H+ + + + T + DMC VCG G+ LL C+ C +H C+ +
Sbjct: 939 SMHNTVVLFSSSDKFTL--NQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKV 996
Query: 541 IPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYC 600
+ GWRC LE C +C + D ++ C
Sbjct: 997 VLSKGWRC--------------------LE--------CTVCEA---CGKATDPGRLLLC 1025
Query: 601 DQCEKEFHVGCLRKNGLCDLKEIPKDKWFC-----CDDCNRIHAALQ-DFVSNRAQTIPA 654
D C+ +H CL L+ +PK W C C C A L+ ++ +N Q P
Sbjct: 1026 DDCDISYHTYCLDP----PLQTVPKGGWKCKWCVWCRHCGATSAGLRCEWQNNYTQCAPC 1081
Query: 655 SSLST 659
+SLS+
Sbjct: 1082 ASLSS 1086
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3 PE=2
SV=2
Length = 4903
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 511 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCP---NCRQGHSSSMSRS 562
+C CG D LLLC+ C +++H CLDP L +P+ GW+C CR ++S
Sbjct: 1002 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSAGLR 1061
Query: 563 VDLKGGLE--APGAEVGGCVIC----RSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNG 616
+ + AP A + C +C R D ++ C QC++ H C N
Sbjct: 1062 CEWQNNYTQCAPCASLSSCPVCCRNYREEDL---------ILQCRQCDRWMHAVCQNLNT 1112
Query: 617 LCDLKEIPKDKWFCCDDC 634
+++ + D F C C
Sbjct: 1113 EEEVENV-ADIGFDCSMC 1129
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 484 TSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC------GDGENLLLCNGCPLAFHAACLD 537
T+ G H + + +A+ + G C VC G+ +L+C+ C +H CL
Sbjct: 359 TTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQ 418
Query: 538 PLL--IPESGWRCPNCR 552
P++ +P +GW+C NCR
Sbjct: 419 PVMKSVPTNGWKCKNCR 435
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 40/127 (31%)
Query: 509 DDMCHVC---GDGENLLLCNGCPLAFHAACLDPLLIP--ESGWRCPNCRQGHSSSMSRSV 563
D C VC GD + C C +H CLD + P +GW+CP C+
Sbjct: 340 DANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKV---------- 389
Query: 564 DLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEI 623
C C+ + +D ++ CD C+K +H CL+ +K +
Sbjct: 390 ---------------CQNCKQ------SGEDSKMLVCDTCDKGYHTFCLQPV----MKSV 424
Query: 624 PKDKWFC 630
P + W C
Sbjct: 425 PTNGWKC 431
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 71/185 (38%), Gaps = 51/185 (27%)
Query: 489 TLHDIAISLAMGQRRTTGGSDDMCHVCGD-GEN----LLLCNGCPLAFHAACLD---PLL 540
++H+ + + + T DMC VCG G+ LL C+ C +H C+ +
Sbjct: 932 SMHNTVVLFSSSDKFTL--QQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKV 989
Query: 541 IPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYC 600
+ GWRC LE C +C + D ++ C
Sbjct: 990 VLSKGWRC--------------------LE--------CTVCEA---CGKATDPGRLLLC 1018
Query: 601 DQCEKEFHVGCLRKNGLCDLKEIPKDKWFC-----CDDCNRIHAALQ-DFVSNRAQTIPA 654
D C+ +H CL L+ +PK W C C C A L+ ++ +N Q P
Sbjct: 1019 DDCDISYHTYCLDP----PLQTVPKGGWKCKWCVWCRHCGATSAGLRCEWQNNYTQCAPC 1074
Query: 655 SSLST 659
+SLS+
Sbjct: 1075 ASLSS 1079
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 505 TGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPES--GWRCPNC 551
T ++ C CG+ NL+ CN C AFHA CL P L S WRCP C
Sbjct: 45 TDAKENACQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPEC 93
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 509 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
++ C VC DG +LL C+ CP +H CL P L IP+ W CP C
Sbjct: 35 EEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 512 CHVC---GDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR 552
C +C GD EN++LC+GC H C+ P L +PE W CP CR
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECR 1196
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 555 HSSSMSRSVDL-KGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLR 613
H S++ RSV K L A C ICR D ++ CD C++ H C+R
Sbjct: 1132 HLSTLDRSVIWSKSILNA------RCKICRKKG------DAENMVLCDGCDRGHHTYCVR 1179
Query: 614 KNGLCDLKEIPKDKWFC 630
LK +P+ WFC
Sbjct: 1180 PK----LKTVPEGDWFC 1192
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 494 AISLAMGQRRTTGGSD----DMCHVCGDGEN---LLLCNGCPLAFHAACLDPLL--IPES 544
A ++ M QR+ T + +C CG G N LLLC+GC ++H CL P L +P+
Sbjct: 274 AFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKG 333
Query: 545 GWRCPNC 551
WRCP C
Sbjct: 334 DWRCPKC 340
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 512 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 568
C VC +G +LL C+ CP AFH CL+ + IPE W C +C+ G V +K G
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLN-IDIPEGNWYCNDCKAGKKPHYREIVWVKVG 1663
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 500 GQRRTTGG----SDDMCHVCGDGENLLLCN--GCPLAFHAACLDPLLIPESGWRCP 549
G+RR+ G +D C CGD L+ C GCP +HA CL+ P W CP
Sbjct: 2003 GKRRSQGEVTKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECP 2058
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 494 AISLAMGQRRTTGGSD----DMCHVCGDGEN---LLLCNGCPLAFHAACLDPLL--IPES 544
A ++ M QR+ T + +C CG G N LLLC+GC ++H CL P L +P+
Sbjct: 274 AFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKG 333
Query: 545 GWRCPNC 551
WRCP C
Sbjct: 334 DWRCPKC 340
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 512 CHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGG 568
C VC +G +LL C+ CP AFH CL+ + IPE W C +C+ G V +K G
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLN-IDIPEGNWYCNDCKAGKKPHYREIVWVKVG 1765
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 502 RRTTGG----SDDMCHVCGDGENLLLCN--GCPLAFHAACLDPLLIPESGWRCP 549
RRT G +D C CGD L+ C GCP +HA CL+ P W CP
Sbjct: 2107 RRTQGEITKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECP 2160
>sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1
Length = 776
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 512 CHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPES-GWRCPNCRQGHS 556
CHVCG D + LLC+ C +AFH CL+P L IP+ W CP+CR S
Sbjct: 316 CHVCGIKQDPDKQLLCDECDMAFHTYCLNPPLTTIPDDEDWYCPDCRNDAS 366
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1
PE=1 SV=2
Length = 1365
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 500 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 554
G+R T + C VC G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 822 GKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLN-IEMPDGSWFCNDCRAG 875
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 61/163 (37%), Gaps = 30/163 (18%)
Query: 458 NKEISPSQ--FEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVC 515
NK SPS E + +P Y S T + ++S +R + +C +C
Sbjct: 614 NKSSSPSASLTEHEVSDSPGDEPSESPYESADETQTEASVSSKKSERGMAAKKEYVCQLC 673
Query: 516 GDGENLLLCNG-CPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGA 574
+LLLC G C AFH ACL PE + C C G
Sbjct: 674 EKTGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCTECASG-------------------- 713
Query: 575 EVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGL 617
+ C +C+ R V+ +QC K +H C++K L
Sbjct: 714 -IHSCFVCKESKMEV----KRCVV--NQCGKFYHEACVKKYPL 749
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 508 SDDMCHVCGDGENLLLCNG--CPLAFHAACLDPLLIPESGWRCP 549
S+D C CGDG L+LC+ C A+H +CL P W CP
Sbjct: 1238 SEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECP 1281
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 69/179 (38%), Gaps = 56/179 (31%)
Query: 512 CHVCGDGE---NLLLCNGCPLAFHAACLD--PLLIPES-GWRCP--NCRQGHSSSMSRSV 563
C VC + + + N C +H AC+ PL + ES G+RCP +C H+S+ S
Sbjct: 717 CFVCKESKMEVKRCVVNQCGKFYHEACVKKYPLTVFESRGFRCPLHSCMSCHASNPSNPR 776
Query: 564 DLKGGL----EAPGAEVGG--------------CVICRSHDFSAATFDDR---------- 595
KG + P A GG +IC H F+A
Sbjct: 777 PSKGKMMRCVRCPVAYHGGDACLAAGCSVIASNSIICTGH-FTARKGKRHHTHVNVSWCF 835
Query: 596 ------TVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDC---NRIHAALQDFV 645
+++ C+ C FH CL E+P WF C+DC ++H QD +
Sbjct: 836 VCSKGGSLLCCEACPAAFHPDCLN-------IEMPDGSWF-CNDCRAGKKLH--FQDII 884
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 512 CHVCG---DGENLLLCNGCPLAFHAACLDPLL---IPESGWRCPNCR 552
CHVCG D + L+C+ C +AFH CL P L PE W CP+CR
Sbjct: 322 CHVCGGKQDPDKQLMCDECDMAFHIYCLRPPLSSVPPEEEWYCPDCR 368
Score = 33.9 bits (76), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 579 CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDC 634
C +C H D+ ++ CD+C+ FH+ CLR L +P ++ + C DC
Sbjct: 317 CRMCACHVCGGKQDPDKQLM-CDECDMAFHIYCLRP----PLSSVPPEEEWYCPDC 367
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 512 CHVC---GDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR 552
C +C GD EN++LC+GC H C+ P L +P+ W CP CR
Sbjct: 1152 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGDWFCPECR 1197
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 555 HSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRK 614
H S++ RSV + + C ICR D ++ CD C++ H C+R
Sbjct: 1133 HLSTLDRSV-----MWSKSILNARCKICRKKG------DAENMVLCDGCDRGHHTYCVRP 1181
Query: 615 NGLCDLKEIPKDKWFC 630
LK +P WFC
Sbjct: 1182 K----LKAVPDGDWFC 1193
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1
SV=2
Length = 782
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 512 CHVCGD---GENLLLCNGCPLAFHAACLDPLLI---PESGWRCPNCRQGHS 556
CHVCG E LLC+ C +AFH CL P L PE W CP+CR S
Sbjct: 323 CHVCGGREAPEKQLLCDECDMAFHLYCLKPPLTSVPPEPEWYCPSCRTDSS 373
>sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=PHF21B PE=2 SV=1
Length = 531
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 509 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQ 553
D+ C C G NL C CP A+H +CL+P L P+ W CP C+Q
Sbjct: 352 DEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQ 398
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 484 TSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCG---DGENLLLCNGCPLAFHAACLDPLL 540
TS + I ++ + +R + C CG + E +LLC+GC A+H +CLDP L
Sbjct: 243 TSAQSPVQTIQVNGSTSLKRPLIERGEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPL 302
Query: 541 --IPESGWRCPNCR 552
IP+ W C C+
Sbjct: 303 TSIPKEDWYCDACK 316
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 596 TVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDC 634
T++ CD CE +H CL L IPK+ W+ CD C
Sbjct: 282 TILLCDGCEAAYHTSCLDP----PLTSIPKEDWY-CDAC 315
>sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1
SV=1
Length = 793
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 512 CHVCG---DGENLLLCNGCPLAFHAACLDPLL--IP-ESGWRCPNCRQGHS 556
CH+CG D + L+C+ C +AFH CLDP L +P E W CP CR S
Sbjct: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDAS 368
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 509 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR 552
+D C VC LL+C+ C +H CLDP L IP+ W CP C+
Sbjct: 488 EDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 586 DFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC--CDD 633
DF + ++ CD C + +H+ CL LK IPK W C C D
Sbjct: 489 DFCSVCRKSGQLLMCDTCSRVYHLDCLDP----PLKTIPKGMWICPRCQD 534
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 512 CHVC---GDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSR 561
C VC G+ + L+LC+ C AFH CL P+L IP+ W CP C+ + SR
Sbjct: 1154 CKVCRKKGEDDKLILCDECNKAFHLFCLRPVLFNIPDGEWLCPACQPATARRSSR 1208
Score = 38.1 bits (87), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 573 GAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 630
+E C +CR +D +I CD+C K FH+ CLR L IP +W C
Sbjct: 1148 SSENARCKVCRKKG------EDDKLILCDECNKAFHLFCLRPV----LFNIPDGEWLC 1195
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1
PE=1 SV=1
Length = 1365
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 500 GQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQG 554
G+R + C VC G +LL C CP AFH CL+ + +P+ W C +CR G
Sbjct: 822 GKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLN-IEMPDGSWFCNDCRAG 875
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 28/142 (19%)
Query: 477 QPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNG-CPLAFHAAC 535
+P Y S T ++++S +R T + +C +C +LLLC G C AFH AC
Sbjct: 635 EPSESPYESADETQTEVSVSSKKSERGVTAKKEYVCQLCEKPGSLLLCEGPCCGAFHLAC 694
Query: 536 LDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDR 595
L PE + C C G + C +C+ + T R
Sbjct: 695 LGLSRRPEGRFTCSECASG---------------------IHSCFVCK----ESKTDVKR 729
Query: 596 TVIYCDQCEKEFHVGCLRKNGL 617
V+ QC K +H C++K L
Sbjct: 730 CVV--TQCGKFYHEACVKKYPL 749
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 508 SDDMCHVCGDGENLLLCNG--CPLAFHAACLDPLLIPESGWRCP 549
S+D C CGDG L+LC+ C A+H +CL P W CP
Sbjct: 1238 SEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECP 1281
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 498 AMGQRRTTGGSDDMCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
A ++ T+ +C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 273 ARSKKPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQC 331
>sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2
Length = 1503
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 511 MCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+C VCG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 297 VCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKC 342
>sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1
PE=3 SV=2
Length = 775
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 512 CHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPES-GWRCPNCRQGHS 556
C+VCG D E LLC+ C +AFH CL P L IP+ W CP+CR S
Sbjct: 318 CYVCGGKQDPEKQLLCDECDMAFHIYCLKPPLSAIPQDEDWYCPDCRNDAS 368
Score = 33.1 bits (74), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 578 GCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDC 634
C +C D + CD+C+ FH+ CL+ L IP+D+ + C DC
Sbjct: 317 ACYVC------GGKQDPEKQLLCDECDMAFHIYCLKP----PLSAIPQDEDWYCPDC 363
>sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1
PE=2 SV=2
Length = 774
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 512 CHVCGD---GENLLLCNGCPLAFHAACLDPLLI---PESGWRCPNCRQGHS 556
CH+CG E +LC+ C +AFH CL P L PE W CP+CR S
Sbjct: 315 CHICGGREAPEKQVLCDECDMAFHLYCLQPPLTCVPPEPEWYCPSCRTDSS 365
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 511 MCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+CH+C G E++LLC+GC ++H CL P L IP+ W CP C
Sbjct: 450 ICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRC 495
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Query: 556 SSSMSRSVDLKGGLEAPGAEVGG-----CVICRSHDFSAATFDDRTVIYCDQCEKEFHVG 610
+++ +R K G E P V C IC D + +++ CD C+ +H
Sbjct: 423 TTANTRGASQKKGGEPPALIVDPLMKYICHICNRGDV------EESMLLCDGCDDSYHTF 476
Query: 611 CLRKNGLCDLKEIPKDKWFC 630
CL L L IPK +W C
Sbjct: 477 CL----LPPLTSIPKGEWLC 492
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 512 CHVC---GDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSR 561
C VC G+ + L+LC+ C AFH CL P L +P+ W+CP C+ + SR
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPATARRNSR 1241
Score = 40.4 bits (93), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 573 GAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 630
AE C +CR +D +I CD+C K FH+ CLR L E+P +W C
Sbjct: 1181 SAENARCKVCRKKG------EDDKLILCDECNKAFHLFCLRPA----LYEVPDGEWQC 1228
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 509 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR 552
+D C VC LL+C+ C +H CL+P L IP+ W CP C+
Sbjct: 468 EDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 513
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 586 DFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC--CDD 633
DF + ++ CD C + +H+ CL LK IPK W C C D
Sbjct: 469 DFCSVCRKSGQLLMCDTCSRVYHLDCLEP----PLKTIPKGMWICPRCQD 514
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 511 MCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKC 356
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 511 MCHVCGDG---ENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+C +CG G + LLLC+GC ++H CL P L +P+ WRCP C
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKC 356
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 511 MCHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
+C VCG D +++LLC+ C +H CL+P L IP+ W CP+C
Sbjct: 1289 VCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSC 1334
Score = 37.4 bits (85), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 570 EAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWF 629
+AP E G C +C DD +V+ CD C+ E+H CL L IP W+
Sbjct: 1282 KAPWDE-GVCKVC------GVDKDDDSVLLCDTCDAEYHTYCLNP----PLIRIPDGNWY 1330
Query: 630 C 630
C
Sbjct: 1331 C 1331
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 509 DDMCHVCGDGENL---LLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSRSV 563
D C CG E++ ++C+ C FH +C++ + P + W C +CR G S +
Sbjct: 83 DASCGACGRPESIELVVVCDACERGFHMSCVNDGVEAAPSADWMCSDCRTGGERSKLWPL 142
Query: 564 DLKGGL 569
+K L
Sbjct: 143 GVKSKL 148
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 501 QRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNC 551
+R+ T + D C CG + C GCP +FH +CL+P L IPE W C C
Sbjct: 109 RRKATIRNVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTC 163
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 512 CHVC---GDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
C VC GDGE+++LC+GC H C+ P L +PE W CP C
Sbjct: 225 CKVCRKKGDGESMVLCDGCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 579 CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC--CDDCNR 636
C +CR D +++ CD C++ H+ C+R LK +P+ WFC C R
Sbjct: 225 CKVCRKKG------DGESMVLCDGCDRGHHIYCVRPK----LKYVPEGDWFCPECHPKQR 274
Query: 637 IH 638
H
Sbjct: 275 SH 276
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 509 DDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR 552
DD C VC +LL C CP +H C+DP + +P W+C CR
Sbjct: 339 DDHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLCR 384
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 511 MCHVCG--DGEN-LLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
C VCG D E+ LLLC+GC +H CLDP L +P W CP C
Sbjct: 187 FCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 232
Score = 37.0 bits (84), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 10/54 (18%)
Query: 579 CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCD 632
C +C D +DR ++ CD C+ +H+ CL L+E+P D+WFC +
Sbjct: 188 CEVCGRSDR-----EDR-LLLCDGCDAGYHMECLDP----PLQEVPVDEWFCPE 231
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 512 CHVC---GDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQGHSSSMSR 561
C VC G+ + L+LC+ C AFH CL P L +P+ W+CP C+ + SR
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPPTARRNSR 1241
Score = 40.4 bits (93), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 573 GAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 630
AE C +CR +D +I CD+C K FH+ CLR L E+P +W C
Sbjct: 1181 SAENARCKVCRKKG------EDDKLILCDECNKAFHLFCLRPA----LYEVPDGEWQC 1228
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 511 MCHVCG--DGEN-LLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
C VCG D E+ LLLC+GC +H CLDP L +P W CP C
Sbjct: 190 FCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 235
Score = 37.0 bits (84), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 579 CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFC 630
C +C D +DR ++ CD C+ +H+ CL L+E+P D+WFC
Sbjct: 191 CEVCGRSDR-----EDR-LLLCDGCDAGYHMECLDP----PLQEVPVDEWFC 232
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 511 MCHVCG--DGEN-LLLCNGCPLAFHAACLDPLL--IPESGWRCPNC 551
C VCG D E+ LLLC+GC +H CLDP L +P W CP C
Sbjct: 185 FCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 230
Score = 37.4 bits (85), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 10/54 (18%)
Query: 579 CVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCD 632
C +C D +DR ++ CD C+ +H+ CL L+E+P D+WFC +
Sbjct: 186 CEVCGRSDR-----EDR-LLLCDGCDAGYHMECLDPP----LQEVPVDEWFCPE 229
>sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2
SV=1
Length = 772
Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 512 CHVCG---DGENLLLCNGCPLAFHAACLDPLL--IPES-GWRCPNCRQGHS 556
C +CG D E LLC+ C LAFH CL P L IP+ W CP+CR S
Sbjct: 316 CCICGGKQDPEKQLLCDECDLAFHIYCLKPPLSVIPQDEDWYCPDCRNDAS 366
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 508 SDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNCR 552
++D C C + L C+ CP +FH CLDP + +P+ W C C+
Sbjct: 259 NEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNECK 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 325,391,502
Number of Sequences: 539616
Number of extensions: 14295563
Number of successful extensions: 38895
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 38110
Number of HSP's gapped (non-prelim): 901
length of query: 851
length of database: 191,569,459
effective HSP length: 126
effective length of query: 725
effective length of database: 123,577,843
effective search space: 89593936175
effective search space used: 89593936175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)