Query 003072
Match_columns 850
No_of_seqs 227 out of 1150
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 12:17:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003072.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003072hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 5E-247 2E-251 2115.8 49.5 739 1-848 104-879 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 8E-224 3E-228 1928.3 59.3 736 1-850 76-822 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 5E-223 2E-227 1916.0 53.8 725 1-846 66-796 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 7E-220 2E-224 1889.8 53.4 721 1-850 67-794 (796)
5 3vue_A GBSS-I, granule-bound s 99.4 4.2E-13 1.4E-17 151.2 12.5 275 448-842 230-508 (536)
6 3nb0_A Glycogen [starch] synth 98.3 6.1E-06 2.1E-10 96.8 15.4 228 449-727 250-573 (725)
7 2qzs_A Glycogen synthase; glyc 97.9 0.00012 4.1E-09 78.8 15.4 138 561-728 280-424 (485)
8 1rzu_A Glycogen synthase 1; gl 97.9 0.00027 9.2E-09 76.1 16.4 184 562-840 281-471 (485)
9 2x6q_A Trehalose-synthase TRET 97.3 0.0028 9.7E-08 66.6 13.9 134 569-728 227-364 (416)
10 3fro_A GLGA glycogen synthase; 97.2 0.0034 1.2E-07 65.4 13.6 135 563-729 244-379 (439)
11 3s28_A Sucrose synthase 1; gly 97.2 0.0012 4.1E-08 78.9 11.3 144 564-729 563-714 (816)
12 3okp_A GDP-mannose-dependent a 97.1 0.005 1.7E-07 63.3 13.1 130 569-729 194-328 (394)
13 3oy2_A Glycosyltransferase B73 97.0 0.0042 1.4E-07 65.1 11.6 125 572-718 183-314 (413)
14 3c48_A Predicted glycosyltrans 96.9 0.0049 1.7E-07 65.0 11.9 137 569-729 239-375 (438)
15 2f9f_A First mannosyl transfer 96.7 0.0032 1.1E-07 59.4 7.7 131 566-728 16-146 (177)
16 2jjm_A Glycosyl transferase, g 96.6 0.0054 1.8E-07 64.0 8.9 128 569-729 207-334 (394)
17 2r60_A Glycosyl transferase, g 96.5 0.011 3.6E-07 64.2 11.2 136 569-729 258-408 (499)
18 2bfw_A GLGA glycogen synthase; 96.5 0.011 3.7E-07 55.8 9.4 135 562-729 28-164 (200)
19 2iw1_A Lipopolysaccharide core 95.7 0.019 6.5E-07 58.7 7.7 128 569-728 192-319 (374)
20 2gek_A Phosphatidylinositol ma 95.7 0.032 1.1E-06 57.7 9.3 125 572-728 207-332 (406)
21 3qhp_A Type 1 capsular polysac 95.2 0.055 1.9E-06 49.5 8.2 112 574-717 3-116 (166)
22 2iuy_A Avigt4, glycosyltransfe 94.1 0.081 2.8E-06 54.0 7.0 128 572-732 161-296 (342)
23 2vsy_A XCC0866; transferase, g 90.3 2.3 8E-05 46.6 13.1 104 575-707 378-482 (568)
24 1uqt_A Alpha, alpha-trehalose- 88.2 7.5 0.00026 43.5 15.3 142 572-729 254-403 (482)
25 3beo_A UDP-N-acetylglucosamine 85.5 1.9 6.4E-05 44.2 8.0 124 571-731 204-329 (375)
26 1vgv_A UDP-N-acetylglucosamine 83.0 8.7 0.0003 39.4 11.7 65 657-731 264-329 (384)
27 1f0k_A MURG, UDP-N-acetylgluco 59.5 25 0.00087 35.7 8.3 102 570-710 180-283 (364)
28 2x0d_A WSAF; GT4 family, trans 58.5 23 0.0008 38.2 8.3 123 572-729 240-363 (413)
29 3t5t_A Putative glycosyltransf 39.1 73 0.0025 36.2 8.6 137 573-729 281-422 (496)
30 2hy7_A Glucuronosyltransferase 37.6 81 0.0028 33.6 8.3 106 574-729 223-336 (406)
31 3s4e_A Dual specificity protei 31.4 51 0.0017 30.1 4.8 38 241-282 81-121 (144)
32 1v4v_A UDP-N-acetylglucosamine 31.3 2.6E+02 0.0087 28.5 10.5 52 657-715 256-308 (376)
33 3emu_A Leucine rich repeat and 28.2 55 0.0019 30.8 4.5 37 242-282 88-127 (161)
34 3ezz_A Dual specificity protei 27.8 70 0.0024 28.9 5.0 39 241-283 81-122 (144)
35 1uqt_A Alpha, alpha-trehalose- 20.8 1.2E+02 0.004 33.9 6.0 53 241-314 122-174 (482)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=4.6e-247 Score=2115.80 Aligned_cols=739 Identities=49% Similarity=0.858 Sum_probs=703.8
Q ss_pred CcccCCcchHHHHHhcCcHHHH-------------HHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCC
Q 003072 1 MEFLQGRALLNAIGNLGLTGAY-------------AEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYP 67 (850)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~-------------~eal~~lg~~le~~~~~E~da~LgnGGLGrLAgc~ldS~a~L~~P 67 (850)
|||||||+|.|||+|||+.+.+ ++||++||+++|+++++|+||||||||||||||||||||||||+|
T Consensus 104 ~EFL~Gr~L~n~l~nlg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP 183 (879)
T 1ygp_A 104 LEFLMGRALDNALINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIP 183 (879)
T ss_dssp SCCCCBCHHHHHHHSCCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhhhHHHHHHHhcCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCC
Confidence 7999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCcceeEEecCCceeeecccccccCCCcccccCCceeeeecCCeeee--CC-CCCe--eeeCCeeEEEEEEe
Q 003072 68 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVP--GS-DGKS--HWIGGEDIKAVAYD 142 (850)
Q Consensus 68 ~~G~GlrY~yG~F~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~--~~-~G~~--~w~~~~~v~A~~yd 142 (850)
++||||||+||||+|+|.||||+|.||+||..|||||++|++.++||+|+|+++. +. +|+. .|++++.|+|+|||
T Consensus 184 ~~GyGlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD 263 (879)
T 1ygp_A 184 AWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYD 263 (879)
T ss_dssp EEEEEECCSSCSCEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEE
T ss_pred eEEEEeeecCCceEEEeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999983 34 6754 49999999999999
Q ss_pred ecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhHHHHHhhhcccccceeccCCCccccchhhhhhhhhhhhchHHH
Q 003072 143 IPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQD 222 (850)
Q Consensus 143 ~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~g~~~~a~~~~~~~~~IT~~LYp~D~~~~GkelRLkQEyflg~aslqd 222 (850)
+|||||+|+++|+||||++++++ .|+|+.||.|||.+++++++.+|+||++|||+|++++||+|||||||||||||+||
T Consensus 264 ~Pi~Gy~~~~~n~lRLW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqd 342 (879)
T 1ygp_A 264 FPVPGFKTSNVNNLRLWQARPTT-EFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHD 342 (879)
T ss_dssp EEEECSSCCCEEEEEEEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCCceEEEEEEEeccCc-ccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHH
Confidence 99999999999999999999666 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCHHH
Q 003072 223 IIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 302 (850)
Q Consensus 223 iirr~~~~~gG~~~l~~l~~~~~ihlNDtHpalai~ElmR~Lid~~gl~~~eAw~i~~~~~~fTnHT~vpealEkw~~~l 302 (850)
|||+|++.+| +|+.||++++|||||||||||||||||+|+|++|++|++||+||+++|+||||||||||||+||++|
T Consensus 343 ilr~~~~~~~---~l~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l 419 (879)
T 1ygp_A 343 ILRRFKKSKR---PWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRL 419 (879)
T ss_dssp HHHHHHHHTC---CGGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHH
T ss_pred HHHHHHHhCC---ChhhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHH
Confidence 9999999873 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCC
Q 003072 303 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEG 382 (850)
Q Consensus 303 ~~~lLpr~~~II~~in~~f~~~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (850)
|+++||||++||++||.+|++.+..+||+ +.+++.+|+|++
T Consensus 420 ~~~lLpr~~~II~ein~~f~~~~~~~~~~-----d~~~~~~l~ii~---------------------------------- 460 (879)
T 1ygp_A 420 FGHLLPRHLEIIYDINWFFLEDVAKKFPK-----DVDLLSRISIIE---------------------------------- 460 (879)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHSTT-----CTHHHHHHCSEE----------------------------------
T ss_pred HHHHCCcHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHhcceec----------------------------------
Confidence 99999999999999999999999999998 899999999977
Q ss_pred CCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcc
Q 003072 383 GPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHA 462 (850)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~Ma~LAl~~S~~ 462 (850)
+ .+++++||||+||+++||+
T Consensus 461 ----------------------------------------------------------~--~~~~~~v~MA~LAi~~S~~ 480 (879)
T 1ygp_A 461 ----------------------------------------------------------E--NSPERQIRMAFLAIVGSHK 480 (879)
T ss_dssp ----------------------------------------------------------C--CSSSCEEEHHHHHHHHEEE
T ss_pred ----------------------------------------------------------c--CCCcceeehHHHHHHhcCc
Confidence 1 0122689999999999999
Q ss_pred hhHHHHHHHHHHhHhhhhhhhhhcCC-CcccccccccccccccccChhHHHHHHhhcCC--CccccCcchHHHhhhcCCC
Q 003072 463 VNGVAEIHSEIVTNEVFNEFYKLWPE-KFQNKTNGVTPRRWIRFCNPDLSSILTSWLGT--EDWVTNTGKLAELRKFADN 539 (850)
Q Consensus 463 vNGVS~lH~ei~k~~~f~~f~~l~P~-kf~niTNGV~~rrWl~~~Np~L~~Li~~~iG~--~~W~~~~~~l~~l~~~~~D 539 (850)
|||||+||++|+|++||++|+++||+ ||+|||||||+|||+.+|||+|++||+++||+ ++|.+++++|++|+++++|
T Consensus 481 vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D 560 (879)
T 1ygp_A 481 VNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVED 560 (879)
T ss_dssp EEESSHHHHHHHHHTTTHHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGC
T ss_pred eeEehHHHHHHHHHHHhHHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCc
Confidence 99999999999999999999999999 99999999999999999999999999999993 3999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCcCC-----CCcccccccccccccccccchhhhHHHHHHHHHhcC------h
Q 003072 540 EDLQSQFRAAKRNNKMKVVSFIKEKT-GYSVS-----PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMS------A 607 (850)
Q Consensus 540 ~~f~~~w~~vK~~~K~~L~~~i~~~~-g~~ld-----pd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~------~ 607 (850)
++|+++|+++|++||.+|++||++++ |+.|| |++|||||||||||||||+||+|++++||++||+ + |
T Consensus 561 ~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p 639 (879)
T 1ygp_A 561 KEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASI 639 (879)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-CccccCCC
Confidence 99999999999999999999999999 99999 9999999999999999999999999999999997 5 4
Q ss_pred hhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCcc
Q 003072 608 VERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM 687 (850)
Q Consensus 608 ~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~ 687 (850)
....++++||||||||||||+|.+||.|||+|++||++||+||+++++||||||||||||+||+||||||||+||||||+
T Consensus 640 ~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~ 719 (879)
T 1ygp_A 640 EEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGT 719 (879)
T ss_dssp HHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTC
T ss_pred cccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCc
Confidence 42224478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccchhhcccceEeeecccccccccccccccceeeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCcc
Q 003072 688 EASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSY 767 (850)
Q Consensus 688 EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f~fG~~~~EV~~l~~~~~~~~~~~~~~l~~v~~~i~~g~f~~~ 767 (850)
||||||||||||||+|||||||||||||+++||+||+|+||++++||..+|.+++...|..+|.+++|+|+|.+|.|++.
T Consensus 720 EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~ 799 (879)
T 1ygp_A 720 EASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPE 799 (879)
T ss_dssp CSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTT
T ss_pred cccCchhhHHHHcCCeeeecccchhHHHHHHcCcccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998877778899999999999999999864
Q ss_pred ---cHHHHHHHhccCCCCCCCcccccccchhhHHHHHHHHHHHhcCHh-HHHHHHHHHhhcCCCCChhHHHHHHHHHHhc
Q 003072 768 ---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKFSSDRTIQEYARDIWN 843 (850)
Q Consensus 768 ---~~~~l~~~L~~~~~~~~~D~y~vl~DF~sY~~aq~~v~~~Y~d~~-~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~ 843 (850)
+|++||++|+.+ +|+|||++||++|++||++|+++|.|++ +|++|||.|||+||+|||||||+|||++||+
T Consensus 800 ~~~~f~~l~~~L~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~~IW~ 874 (879)
T 1ygp_A 800 NPNEFKPLVDSIKYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWN 874 (879)
T ss_dssp STTTTHHHHHHHHHS-----TTTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHhcC-----CCeEEEeccHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHHHHHHhhC
Confidence 499999999865 7999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ccccC
Q 003072 844 IIPVE 848 (850)
Q Consensus 844 i~p~~ 848 (850)
++|++
T Consensus 875 ~~p~~ 879 (879)
T 1ygp_A 875 VEPVT 879 (879)
T ss_dssp CCCC-
T ss_pred CCCCC
Confidence 99964
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=7.5e-224 Score=1928.34 Aligned_cols=736 Identities=46% Similarity=0.842 Sum_probs=693.5
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003072 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (850)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAgc~ldS~a~L~~P~~G~GlrY~yG~F 80 (850)
|||||||+|.|||+|||+++++++||++||+++|+++++|+||||||||||||||||||||||||+|++||||||+||||
T Consensus 76 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F 155 (824)
T 2gj4_A 76 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIF 155 (824)
T ss_dssp SCEEEECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSC
T ss_pred hhhcchhhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003072 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (850)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (850)
+|+|+||||+|.||+||..|||||++|++.++||+|+|+++.+.+|. .|++++.|+|+|||+|||||+|++||+||||+
T Consensus 156 ~Q~i~dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~ 234 (824)
T 2gj4_A 156 NQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWS 234 (824)
T ss_dssp EEEEETTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEE
T ss_pred eEEeeCCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEE
Confidence 99999999999999999999999999999999999999998767783 79999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhhhcccccceeccCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcc-----c
Q 003072 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGAN-----V 235 (850)
Q Consensus 161 a~v~~~~fdl~~fn~g~~~~a~~~~~~~~~IT~~LYp~D~~~~GkelRLkQEyflg~aslqdiirr~~~~~gG~-----~ 235 (850)
++ +.++|||..||.|+|..++.++..+++||++|||+|++++||+|||||||||||||+|||||||++.+.|. .
T Consensus 235 a~-~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~ 313 (824)
T 2gj4_A 235 AK-APNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 313 (824)
T ss_dssp EE-CCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred ee-cCcccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhcccccccccc
Confidence 99 67789999999999999999999999999999999999999999999999999999999999999875332 3
Q ss_pred ccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCHHHHHHhchhHHHHHH
Q 003072 236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIE 315 (850)
Q Consensus 236 ~l~~l~~~~~ihlNDtHpalai~ElmR~Lid~~gl~~~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLpr~~~II~ 315 (850)
+|+.||+|++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||+
T Consensus 314 ~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~ 393 (824)
T 2gj4_A 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIY 393 (824)
T ss_dssp CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHH
T ss_pred chhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhcc
Q 003072 316 MIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQED 395 (850)
Q Consensus 316 ~in~~f~~~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (850)
+||.+|+..+..++|+ +.+.+.++++++
T Consensus 394 ~in~~f~~~~~~~~~~-----~~~~~~~~~~i~----------------------------------------------- 421 (824)
T 2gj4_A 394 EINQRFLNRVAAAFPG-----DVDRLRRMSLVE----------------------------------------------- 421 (824)
T ss_dssp HHHHHHHHHHHHHSTT-----CHHHHHHHCSEE-----------------------------------------------
T ss_pred HHHHHHHHHHHHHcCC-----cHHHHHhhhhhh-----------------------------------------------
Confidence 9999999999999998 788888898876
Q ss_pred cccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHHHh
Q 003072 396 GVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVT 475 (850)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ei~k 475 (850)
+ +.++.||||+||+++|++|||||++|++++|
T Consensus 422 ---------------------------------------------~---~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik 453 (824)
T 2gj4_A 422 ---------------------------------------------E---GAVKRINMAHLCIAGSHAVNGVARIHSEILK 453 (824)
T ss_dssp ---------------------------------------------C---SSSCEEEHHHHHHHTCSCEEESSHHHHHHHH
T ss_pred ---------------------------------------------h---cCCCcccHHHHHHHhcCceeeEcHHHHHHHh
Confidence 1 2246899999999999999999999999999
Q ss_pred HhhhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHH
Q 003072 476 NEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKM 555 (850)
Q Consensus 476 ~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~D~~f~~~w~~vK~~~K~ 555 (850)
+.+|++|+++||++|+|||||||+|||+.+|||+++++|++.||+ +|.+++++|++|.++.+|++|+++|+++|++||.
T Consensus 454 ~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~-~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~ 532 (824)
T 2gj4_A 454 KTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGE-EYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKL 532 (824)
T ss_dssp HTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCS-GGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCc-hhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999996 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHH
Q 003072 556 KVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRI 635 (850)
Q Consensus 556 ~L~~~i~~~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~i 635 (850)
+|+++|++++|..+||+++||+|||||||||||+||+|++++||.+|++ +|.. .++|+||||||||||+|.+||.|
T Consensus 533 ~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~-~~~~---~~~p~q~If~GKA~P~y~~aK~i 608 (824)
T 2gj4_A 533 KFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNK---FVVPRTVMIGGKAAPGYHMAKMI 608 (824)
T ss_dssp HHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTS---CCCCEEEEEECCCCTTCHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHh-CCCC---CCCCEEEEEEEeCCHhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997 5542 36799999999999999999999
Q ss_pred HHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccc
Q 003072 636 VKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 715 (850)
Q Consensus 636 Ik~I~~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi 715 (850)
||+|+++|+++|+||+++++|||||+|||||++|++|+||||||+||||||+||||||||||||||+|||||+|||||||
T Consensus 609 Ikli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi 688 (824)
T 2gj4_A 609 IKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEM 688 (824)
T ss_dssp HHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHH
T ss_pred HHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccceeeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCcccc
Q 003072 716 RQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFL 789 (850)
Q Consensus 716 ~e~~g~eN~f~fG~~~~EV~~l~~~~~~~~---~~~~~~l~~v~~~i~~g~f~~~---~~~~l~~~L~~~~~~~~~D~y~ 789 (850)
.++||.+|+|+||..++++..++..+ ++. |..++.++++++.+.+|.|+.. .|.+||++|.. +|+||
T Consensus 689 ~e~vG~~Ngf~FG~~~~ev~~l~~~~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~~~ 761 (824)
T 2gj4_A 689 AEEAGEENFFIFGMRVEDVDRLDQRG-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFK 761 (824)
T ss_dssp HHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTC
T ss_pred hhccCCCCEEEeCCcHHHHHHHHHcC-CCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHc------CChhh
Confidence 99999999999999999998876554 332 6678999999999999999754 49999999986 59999
Q ss_pred cccchhhHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcccccCCC
Q 003072 790 VGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 850 (850)
Q Consensus 790 vl~DF~sY~~aq~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p~~~p 850 (850)
|++||+||++||++|+.+|.|+++|++||+.|||++|+|||||||+|||++||+++|+++|
T Consensus 762 ~~~Df~~y~~~q~~v~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~iw~~~~~~~~ 822 (824)
T 2gj4_A 762 VFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQR 822 (824)
T ss_dssp TGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCCC
T ss_pred hhhhHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998865
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=5.3e-223 Score=1916.05 Aligned_cols=725 Identities=45% Similarity=0.782 Sum_probs=698.9
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003072 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (850)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAgc~ldS~a~L~~P~~G~GlrY~yG~F 80 (850)
|||||||+|.|||+|||+++++++||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 66 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F 145 (796)
T 1l5w_A 66 MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLF 145 (796)
T ss_dssp SCCCCCCCHHHHHHHHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSC
T ss_pred hHHhHHHHHHHHHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCce
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003072 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (850)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (850)
+|+|.||||+|.||+|+..|+|||++|++.+|+|+|+|+++. + + +|++++.|+|+|||+|||||+|+++|+||||+
T Consensus 146 ~Q~i~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~ 221 (796)
T 1l5w_A 146 RQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQ 221 (796)
T ss_dssp EEEEETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEE
T ss_pred eEEecCCeeEEecCccccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEE
Confidence 999999999999999999999999999999999999999984 2 4 79999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhhhcccccceeccCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccC
Q 003072 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240 (850)
Q Consensus 161 a~v~~~~fdl~~fn~g~~~~a~~~~~~~~~IT~~LYp~D~~~~GkelRLkQEyflg~aslqdiirr~~~~~gG~~~l~~l 240 (850)
+++++ .|+|+.||.|||.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|+++++ +|+.|
T Consensus 222 a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~~~~l 297 (796)
T 1l5w_A 222 ATHAH-PFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR---KLHEL 297 (796)
T ss_dssp EECSS-CCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CGGGH
T ss_pred eccCc-ccChhhcCCccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC---Chhhc
Confidence 99666 799999999999999999999999999999999999999999999999999999999999999873 68889
Q ss_pred CCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHHhHH
Q 003072 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEE 320 (850)
Q Consensus 241 ~~~~~ihlNDtHpalai~ElmR~Lid~~gl~~~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLpr~~~II~~in~~ 320 (850)
+++++||||||||||++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+
T Consensus 298 ~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~ 377 (796)
T 1l5w_A 298 ADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTR 377 (796)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhccccccc
Q 003072 321 LVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEE 400 (850)
Q Consensus 321 f~~~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (850)
|++.+..++|+ +.+.+.+++++.
T Consensus 378 f~~~~~~~~~~-----~~~~~~~~~i~~---------------------------------------------------- 400 (796)
T 1l5w_A 378 FKTLVEKTWPG-----DEKVWAKLAVVH---------------------------------------------------- 400 (796)
T ss_dssp HHHHHHHHSTT-----CHHHHHHHCSEE----------------------------------------------------
T ss_pred HHHHHHHhcCC-----cHHHHhhhhccc----------------------------------------------------
Confidence 99999999998 889999998854
Q ss_pred ccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHHHhHhhhh
Q 003072 401 ESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFN 480 (850)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ei~k~~~f~ 480 (850)
+ +.||||+||+++||+|||||++|++++|+.+|+
T Consensus 401 ----------------------------------------~------~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~ 434 (796)
T 1l5w_A 401 ----------------------------------------D------KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFP 434 (796)
T ss_dssp ----------------------------------------T------TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSH
T ss_pred ----------------------------------------C------CcccHHHHHHHhcCccccccHHHHHHHHhHHhh
Confidence 2 479999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 003072 481 EFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSF 560 (850)
Q Consensus 481 ~f~~l~P~kf~niTNGV~~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~D~~f~~~w~~vK~~~K~~L~~~ 560 (850)
+|+++||+||+|||||||+|||+.+|||++++||++.+|+ +|+++++.|++|.++++|++|+++|+++|++||.+|++|
T Consensus 435 ~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~-~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~ 513 (796)
T 1l5w_A 435 EYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK-EWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEF 513 (796)
T ss_dssp HHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSS-CCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCc-ccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999996 999999999999999999999999878999999999999
Q ss_pred HHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHH
Q 003072 561 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 640 (850)
Q Consensus 561 i~~~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 640 (850)
|++++|..+||+++||+|||||||||||+||+|++++||.+||+ +|... ++|+||||||||||+|.+||.|||+|+
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~i~ 589 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD---RVPRVFLFGAKAAPGYYLAKNIIFAIN 589 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHT-CTTCC---CCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhc-CCCCC---CCCeEEEEEecCChhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 65533 679999999999999999999999999
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 003072 641 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 720 (850)
Q Consensus 641 ~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g 720 (850)
++|++||+||+++++|||||+|||||++|++|+||||||+||||||+||||||||||||||+|+|||||||||||.+++|
T Consensus 590 ~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG 669 (796)
T 1l5w_A 590 KVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVG 669 (796)
T ss_dssp HHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHC
T ss_pred HHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCcccccccch
Q 003072 721 EENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDF 794 (850)
Q Consensus 721 ~eN~f~fG~~~~EV~~l~~~~~~~~---~~~~~~l~~v~~~i~~g~f~~~---~~~~l~~~L~~~~~~~~~D~y~vl~DF 794 (850)
++|+|+||.+++||..++..+ +.+ |..+|.++++++.+.+|.|+.. +|.+||++|+.+ ++|+|||++||
T Consensus 670 ~~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~----~~D~~~v~~Df 744 (796)
T 1l5w_A 670 EENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQ----GGDPYLVMADF 744 (796)
T ss_dssp GGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTSTT----TCCTTCHHHHH
T ss_pred CCcEEEecCCHHHHHHHHHcc-cCHHHHhhcCHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHhcc----CCCceeehhhH
Confidence 999999999999999998875 332 6678899999999999999764 499999999851 15999999999
Q ss_pred hhHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcccc
Q 003072 795 PSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 846 (850)
Q Consensus 795 ~sY~~aq~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p 846 (850)
+||++||++|+++|.|+++|++||+.|||+||+|||||||+|||++||+++|
T Consensus 745 ~~y~~~q~~v~~~Y~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~P 796 (796)
T 1l5w_A 745 AAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR 796 (796)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGGBHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999987
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=7.2e-220 Score=1889.80 Aligned_cols=721 Identities=44% Similarity=0.748 Sum_probs=689.3
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003072 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (850)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAgc~ldS~a~L~~P~~G~GlrY~yG~F 80 (850)
|||||||+|.|||+|||+++++++||++||+++++++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 67 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F 146 (796)
T 2c4m_A 67 AEFLMGRALLNNLTNLGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLF 146 (796)
T ss_dssp SCCCCBCSHHHHHHHTTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSC
T ss_pred hhhcchhhhhhHHHhcccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003072 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (850)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (850)
+|+|.||||+|.||+|+..|||||++|++.+|+|+|+|+ .|+|+|||+|||||+|+++|+||||+
T Consensus 147 ~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~ 211 (796)
T 2c4m_A 147 RQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWK 211 (796)
T ss_dssp EEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEE
T ss_pred EEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEe
Confidence 999999999999999999999999999999999999875 46689999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhhhcccccceeccCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccC
Q 003072 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240 (850)
Q Consensus 161 a~v~~~~fdl~~fn~g~~~~a~~~~~~~~~IT~~LYp~D~~~~GkelRLkQEyflg~aslqdiirr~~~~~gG~~~l~~l 240 (850)
+++++ .|+|+.||.|||.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+| +|+.|
T Consensus 212 a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~l~~l 287 (796)
T 2c4m_A 212 AEPWE-EFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK---DLSNF 287 (796)
T ss_dssp EEESS-SSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---CSTTH
T ss_pred ccccc-ccchhhccCcchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC---Chhhc
Confidence 99554 799999999999999999999999999999999999999999999999999999999999999874 68888
Q ss_pred CCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHHhHH
Q 003072 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEE 320 (850)
Q Consensus 241 ~~~~~ihlNDtHpalai~ElmR~Lid~~gl~~~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLpr~~~II~~in~~ 320 (850)
+++++||||||||||++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+
T Consensus 288 ~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~ 367 (796)
T 2c4m_A 288 AEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRR 367 (796)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhccccccc
Q 003072 321 LVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEE 400 (850)
Q Consensus 321 f~~~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (850)
|+..+..+ |+ +.+++.+++++.
T Consensus 368 ~~~~~~~~-~~-----~~~~~~~~~i~~---------------------------------------------------- 389 (796)
T 2c4m_A 368 FRLERAAD-GL-----DEETINRMAPIQ---------------------------------------------------- 389 (796)
T ss_dssp HHHHHHHT-TC-----CHHHHHHHCSEE----------------------------------------------------
T ss_pred HHHHHHhc-CC-----cHhhhhccccee----------------------------------------------------
Confidence 99999999 98 889999998754
Q ss_pred ccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHHHhHhhhh
Q 003072 401 ESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFN 480 (850)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ei~k~~~f~ 480 (850)
+ +.||||+||+++||+|||||++|++++|+.+|+
T Consensus 390 ----------------------------------------~------~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~ 423 (796)
T 2c4m_A 390 ----------------------------------------H------GTVHMAWIACYAAYSINGVAALHTEIIKAETLA 423 (796)
T ss_dssp ----------------------------------------T------TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH
T ss_pred ----------------------------------------C------CcccHHHHHHHhcCceeeccHHHHHHhhhhhhh
Confidence 2 479999999999999999999999999999999
Q ss_pred hhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 003072 481 EFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSF 560 (850)
Q Consensus 481 ~f~~l~P~kf~niTNGV~~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~D~~f~~~w~~vK~~~K~~L~~~ 560 (850)
+|+++||+||+|||||||+|||+.+|||++++||++.+|+++|.+|+++|++|.++++|++|+++|+++|++||.+|++|
T Consensus 424 ~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~ 503 (796)
T 2c4m_A 424 DWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEW 503 (796)
T ss_dssp HHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999944899999999999999999999999999999999999999
Q ss_pred HHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHH
Q 003072 561 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 640 (850)
Q Consensus 561 i~~~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 640 (850)
|++++|..+||+++||+|||||||||||+||+|++++||.+||+ +|... ++|+||||||||||+|.+||.|||+|+
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~i~ 579 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE-DGLTD---IPARTVIFGAKAAPGYVRAKAIIKLIN 579 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHT-SCCCS---SCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhh-CCCCC---CCCeEEEEEecCCHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 55433 679999999999999999999999999
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 003072 641 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 720 (850)
Q Consensus 641 ~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g 720 (850)
++|++||+||+++++|||||+|||||++|++|+||||||+||||||+||||||||||||||+|+|||||||||||.+++|
T Consensus 580 ~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG 659 (796)
T 2c4m_A 580 SIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVG 659 (796)
T ss_dssp HHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHC
T ss_pred HHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCcccccccch
Q 003072 721 EENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDF 794 (850)
Q Consensus 721 ~eN~f~fG~~~~EV~~l~~~~~~~~---~~~~~~l~~v~~~i~~g~f~~~---~~~~l~~~L~~~~~~~~~D~y~vl~DF 794 (850)
++|+|+||.+++++..++.. +.+ |..+|.++++++.+.+|.|+.. +|.+||++|..+...+++|+|||++||
T Consensus 660 ~~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df 737 (796)
T 2c4m_A 660 EENAYIFGARVEELPALRES--YKPYELYETVPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDF 737 (796)
T ss_dssp GGGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHHHHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHHHH
T ss_pred CCcEEEecCchhhHHHHHHh--hChHHHhhcCHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcccCCCCCcchhhhhH
Confidence 99999999999999999887 443 5677899999999999999764 399999999741111226999999999
Q ss_pred hhHHHHHHHHHHHh-cCHhHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcccccCCC
Q 003072 795 PSYLECQEKVDEAY-CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 850 (850)
Q Consensus 795 ~sY~~aq~~v~~~Y-~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p~~~p 850 (850)
+||++||++|+++| .|+++|++||+.|||+||+|||||||+|||++||+++|++.|
T Consensus 738 ~~y~~~q~~v~~~y~~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~~~~~~ 794 (796)
T 2c4m_A 738 ADYRETRDRMAADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPTPAV 794 (796)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHTTCCCCCCC-
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCCCCcC
Confidence 99999999999998 999999999999999999999999999999999999998764
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.43 E-value=4.2e-13 Score=151.21 Aligned_cols=275 Identities=14% Similarity=0.166 Sum_probs=191.8
Q ss_pred CeeeeeeeeeccCcchhHHHHHHHHHHhHhhhhhhh----hhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 003072 448 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFY----KLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 523 (850)
Q Consensus 448 ~~~~Ma~LAl~~S~~vNGVS~lH~ei~k~~~f~~f~----~l~P~kf~niTNGV~~rrWl~~~Np~L~~Li~~~iG~~~W 523 (850)
+.+||-..++..|.+|+.||.-+.+-+.+. |..-. ..-+.++.-|.|||....| ||.-. ..+..
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~----~p~~d----~~~~~--- 297 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEW----DPSKD----KYITA--- 297 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTS----CTTTC----SSSSC---
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhc----CCCCc----ccccc---
Confidence 578999999999999999998776633221 11000 0123578899999999999 46421 11110
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHH
Q 003072 524 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 603 (850)
Q Consensus 524 ~~~~~~l~~l~~~~~D~~f~~~w~~vK~~~K~~L~~~i~~~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik 603 (850)
.+.... ..+.|..+|..| +++.|...||+..+.+++-|+.++|...+ ++..+.++ +
T Consensus 298 -----------~~~~~~-----~~~~K~~~k~~l----~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~l---~ 353 (536)
T 3vue_A 298 -----------KYDATT-----AIEAKALNKEAL----QAEAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPEL---M 353 (536)
T ss_dssp -----------CCCTTT-----HHHHHHHHHHHH----HHHTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHHH---T
T ss_pred -----------ccchhh-----hhhhhHHHHHHH----HHhcCCCCCCCCcEEEEEeeccccCChHH-HHHHHHHh---H
Confidence 011111 125677777665 55789999999999999999999999998 77766553 3
Q ss_pred hcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 003072 604 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 683 (850)
Q Consensus 604 ~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip 683 (850)
+ + ..++++.|...+.+. ..++. .+.. ..+ +|.|+..|+......+..+||+...-|
T Consensus 354 ~-----~-----~~~l~l~G~G~~~~~---~~~~~---~~~~------~~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS 409 (536)
T 3vue_A 354 Q-----E-----DVQIVLLGTGKKKFE---KLLKS---MEEK------YPG--KVRAVVKFNAPLAHLIMAGADVLAVPS 409 (536)
T ss_dssp T-----S-----SCEEEEECCBCHHHH---HHHHH---HHHH------STT--TEEEECSCCHHHHHHHHHHCSEEEECC
T ss_pred h-----h-----CCeEEEEeccCchHH---HHHHH---HHhh------cCC--ceEEEEeccHHHHHHHHHhhheeeccc
Confidence 2 1 236777776443322 22222 2221 122 799999999999999999999999888
Q ss_pred CCccccCCCccchhhcccceEeeecccccccccccccccceeeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCC
Q 003072 684 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV 763 (850)
Q Consensus 684 ~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f~fG~~~~EV~~l~~~~~~~~~~~~~~l~~v~~~i~~g~ 763 (850)
+ .|.+|.+-|-||..|++.|+|--|...|+.++. +|+|+|+.... .. -.
T Consensus 410 ~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg--~~G~~~~~~~~-----------~g----------------~l 458 (536)
T 3vue_A 410 R--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEG--KTGFHMGRLSV-----------DC----------------KV 458 (536)
T ss_dssp S--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBT--TTEEECCCCCS-----------CT----------------TC
T ss_pred c--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCC--CCccccccCCC-----------ce----------------eE
Confidence 7 599999999999999999999999999988654 89999986421 00 12
Q ss_pred CCcccHHHHHHHhccCCCCCCCcccccccchhhHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChhHHHHHHHHHHh
Q 003072 764 FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 842 (850)
Q Consensus 764 f~~~~~~~l~~~L~~~~~~~~~D~y~vl~DF~sY~~aq~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw 842 (850)
|.+.|.+.|.+.|. ++...|.+ +.|.+|+...++ -.||=+++.++|.+ +|
T Consensus 459 ~~~~d~~~la~ai~-------------------------ral~~~~~-~~~~~~~~~am~--~~fSW~~~A~~y~~-ly 508 (536)
T 3vue_A 459 VEPSDVKKVAATLK-------------------------RAIKVVGT-PAYEEMVRNCMN--QDLSWKGPAKNWEN-VL 508 (536)
T ss_dssp CCHHHHHHHHHHHH-------------------------HHHHHTTS-HHHHHHHHHHHH--SCCSSHHHHHHHHH-HH
T ss_pred ECCCCHHHHHHHHH-------------------------HHHHhcCc-HHHHHHHHHHHH--hcCCHHHHHHHHHH-HH
Confidence 34445666766664 44556654 569888876655 36999999999965 44
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=98.30 E-value=6.1e-06 Score=96.81 Aligned_cols=228 Identities=15% Similarity=0.152 Sum_probs=147.4
Q ss_pred eeeeeeeeeccCcchhHHHHHHHHHHhHhhhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcc
Q 003072 449 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTG 528 (850)
Q Consensus 449 ~~~Ma~LAl~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~ 528 (850)
.++|-..+++.|..++.||....+=++. +...-|.++ |-|||....| ||.
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNGID~~~f----~p~------------------- 299 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNGLNVIKF----QAF------------------- 299 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCCBCCCCC----SST-------------------
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCCcccccc----Ccc-------------------
Confidence 4566666888999999998777664443 323334445 8999998888 342
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC--CcCCCC-ccccccccccc-ccccccchhhhHHHHHHHHHh
Q 003072 529 KLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTG--YSVSPD-AMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKE 604 (850)
Q Consensus 529 ~l~~l~~~~~D~~f~~~w~~vK~~~K~~L~~~i~~~~g--~~ldpd-~lfd~~~kR~h-eYKRq~Lnil~ii~ry~~ik~ 604 (850)
.+ +++.|..+|.+|-++++.+.+ ..++++ .++..-+-|+. +-|=-.| ++..+.|+++...
T Consensus 300 -----------~~----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~ 363 (725)
T 3nb0_A 300 -----------HE----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLK 363 (725)
T ss_dssp -----------TH----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHH
T ss_pred -----------hh----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHh
Confidence 12 347889999999999988765 567744 56666689998 6788888 8899999887743
Q ss_pred cChhhhhcccCCeEEEEeccCCCC----------------------cHHHHHHHHHHH----------------------
Q 003072 605 MSAVERKAKFVPRVCIFGGKAFAT----------------------YVQAKRIVKFIT---------------------- 640 (850)
Q Consensus 605 ~~~~~r~~~~~P~~~IFaGKA~P~----------------------y~~aK~iIk~I~---------------------- 640 (850)
.+..++ .+=..+|+.++..-- -..||++.....
T Consensus 364 ~~~~~~---~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 440 (725)
T 3nb0_A 364 VSGSKK---TVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSS 440 (725)
T ss_dssp HTTCCC---EEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHH
T ss_pred hccCCC---cEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChH
Confidence 122111 111223444442211 112233222211
Q ss_pred ----------HHh--------------------------hhhcCCcCCCCcceEEEecCCChhh-------hhhhccccc
Q 003072 641 ----------DVG--------------------------ATVNHDPEIGDLLKVIFVPDYNVSV-------AELLIPASE 677 (850)
Q Consensus 641 ----------~va--------------------------~~vn~Dp~i~~~lkVvFlenY~vsl-------Ae~lipg~D 677 (850)
+.. +.++-...-.++.||||+|.|-=+. -+.++.+||
T Consensus 441 ~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad 520 (725)
T 3nb0_A 441 DKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCH 520 (725)
T ss_dssp HHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCS
T ss_pred HHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhce
Confidence 000 0011111234789999999986553 356789999
Q ss_pred cccccCCCccccCCCccchhhcccceEeeeccccccccccccc-----ccceeee
Q 003072 678 LSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG-----EENFFLF 727 (850)
Q Consensus 678 v~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g-----~eN~f~f 727 (850)
+...-|. .|..|..-|-||.-|++.|.|--|--.|+..++. .+++++|
T Consensus 521 vfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV 573 (725)
T 3nb0_A 521 LGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYI 573 (725)
T ss_dssp EEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEE
T ss_pred EEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEE
Confidence 9999886 6999999999999999999997776555444331 2466655
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.93 E-value=0.00012 Score=78.80 Aligned_cols=138 Identities=13% Similarity=0.112 Sum_probs=97.2
Q ss_pred HHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHH
Q 003072 561 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 640 (850)
Q Consensus 561 i~~~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 640 (850)
++++.|..-+++....+++-|+..+|...+ ++..+.++ ++ . +.++++.|...+ .....+-+++.
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~-~---------~~~l~ivG~g~~--~~~~~l~~~~~ 343 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDL-VLEALPGL---LE-Q---------GGQLALLGAGDP--VLQEGFLAAAA 343 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHH-HHHHHHHH---HH-T---------TCEEEEEEEECH--HHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHH-HHHHHHHH---hh-C---------CcEEEEEeCCch--HHHHHHHHHHH
Confidence 445567544457889999999999999888 76655543 32 0 357888887432 12233333333
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 003072 641 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 720 (850)
Q Consensus 641 ~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g 720 (850)
+.+ + +|+|+..|.-.....++.+||+....|+ .|..|.+-+-+|.-|++.|+|-.|...|+.+...
T Consensus 344 ~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~ 409 (485)
T 2qzs_A 344 EYP----------G--QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCS 409 (485)
T ss_dssp HST----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCC
T ss_pred hCC----------C--cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCc
Confidence 221 2 6887777776666788999999998877 6999999999999999999998888888765421
Q ss_pred -------ccceeeec
Q 003072 721 -------EENFFLFG 728 (850)
Q Consensus 721 -------~eN~f~fG 728 (850)
.+|+++|.
T Consensus 410 ~~~~~~~~~~G~l~~ 424 (485)
T 2qzs_A 410 LENLADGVASGFVFE 424 (485)
T ss_dssp HHHHHTTCCCBEEEC
T ss_pred cccccccccceEEEC
Confidence 15677764
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.85 E-value=0.00027 Score=76.07 Aligned_cols=184 Identities=16% Similarity=0.138 Sum_probs=123.5
Q ss_pred HHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHH
Q 003072 562 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 641 (850)
Q Consensus 562 ~~~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~ 641 (850)
+++.|..-++ ....+++-|+..+|...+ ++..+.++.+ . ..++++.|...+ ..-..+-+++.+
T Consensus 281 r~~~~~~~~~-~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-----------~~~l~ivG~g~~--~~~~~l~~~~~~ 343 (485)
T 1rzu_A 281 AEHFRIDDDG-SPLFCVISRLTWQKGIDL-MAEAVDEIVS--L-----------GGRLVVLGAGDV--ALEGALLAAASR 343 (485)
T ss_dssp HHHHTCCCSS-SCEEEEESCBSTTTTHHH-HHTTHHHHHH--T-----------TCEEEEEECBCH--HHHHHHHHHHHH
T ss_pred HHhcCCCCCC-CeEEEEEccCccccCHHH-HHHHHHHHHh--c-----------CceEEEEeCCch--HHHHHHHHHHHh
Confidence 4455643322 448889999999999888 7766655422 0 357888887422 122333333332
Q ss_pred HhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc--
Q 003072 642 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV-- 719 (850)
Q Consensus 642 va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~-- 719 (850)
.. + +|+|+..|.-.....++.+||+....|+ .|..|.+-+-||.-|++.|+|-.|...|+.+..
T Consensus 344 ~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~ 409 (485)
T 1rzu_A 344 HH----------G--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANH 409 (485)
T ss_dssp TT----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCH
T ss_pred CC----------C--cEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheeccccc
Confidence 21 2 6887777877776789999999998877 699999999999999999999888888876542
Q ss_pred -----cccceeeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCcccHHHHHHHhccCCCCCCCcccccccch
Q 003072 720 -----GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDF 794 (850)
Q Consensus 720 -----g~eN~f~fG~~~~EV~~l~~~~~~~~~~~~~~l~~v~~~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~y~vl~DF 794 (850)
+.+|+++|... |.++|.+.|.
T Consensus 410 ~~~~~~~~~G~l~~~~-------------------------------------d~~~la~~i~----------------- 435 (485)
T 1rzu_A 410 AALASKAATGVQFSPV-------------------------------------TLDGLKQAIR----------------- 435 (485)
T ss_dssp HHHHTTCCCBEEESSC-------------------------------------SHHHHHHHHH-----------------
T ss_pred ccccccCCcceEeCCC-------------------------------------CHHHHHHHHH-----------------
Confidence 11567776421 1223333332
Q ss_pred hhHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChhHHHHHHHHH
Q 003072 795 PSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 840 (850)
Q Consensus 795 ~sY~~aq~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~ 840 (850)
++...|.|++.|.+|.....+ -.||.+++.++|.+-
T Consensus 436 --------~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~ 471 (485)
T 1rzu_A 436 --------RTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAAL 471 (485)
T ss_dssp --------HHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHH
T ss_pred --------HHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHH
Confidence 333345678888877766554 689999999988653
No 9
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.25 E-value=0.0028 Score=66.61 Aligned_cols=134 Identities=18% Similarity=0.126 Sum_probs=94.3
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHH-HHHHHHHHhhhhc
Q 003072 569 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKR-IVKFITDVGATVN 647 (850)
Q Consensus 569 ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~-iIk~I~~va~~vn 647 (850)
++++....+++=|+..+|...+ ++..+.++.+- . ....+++.|.....+...+. +-+++...+
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~--------~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~---- 290 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFD-VIEIYRKVKEK---I--------PGVQLLLVGVMAHDDPEGWIYFEKTLRKIG---- 290 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHH-HHHHHHHHHHH---C--------TTCEEEEEECCCTTCHHHHHHHHHHHHHHT----
T ss_pred CCCCCcEEEEEeccccccCHHH-HHHHHHHHHHh---C--------CCeEEEEEecCcccchhHHHHHHHHHHHhC----
Confidence 5677888999999999999887 77665554221 1 14578888876544333222 333333332
Q ss_pred CCcCCCCcceEEEec---CCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccce
Q 003072 648 HDPEIGDLLKVIFVP---DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 724 (850)
Q Consensus 648 ~Dp~i~~~lkVvFle---nY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~ 724 (850)
+.+ +|.|+. +++-.-...++.+||+-...|+ .|..|++-+-+|.-|++.|+|--|...|+.+.. +++
T Consensus 291 ----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~--~~g 360 (416)
T 2x6q_A 291 ----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG--ETG 360 (416)
T ss_dssp ----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBT--TTE
T ss_pred ----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheecC--CCe
Confidence 123 688865 4444455678899999988777 499999999999999999999888888876543 688
Q ss_pred eeec
Q 003072 725 FLFG 728 (850)
Q Consensus 725 f~fG 728 (850)
+++.
T Consensus 361 ~l~~ 364 (416)
T 2x6q_A 361 FLVR 364 (416)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8886
No 10
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.19 E-value=0.0034 Score=65.35 Aligned_cols=135 Identities=16% Similarity=0.082 Sum_probs=93.8
Q ss_pred HHcCCcCCCCccccccccccc-ccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHH
Q 003072 563 EKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 641 (850)
Q Consensus 563 ~~~g~~ldpd~lfd~~~kR~h-eYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~ 641 (850)
++.| ++++ .+.+++-|+. .+|...+ ++..+.++ ++ ... ..+..+++.|...+. ....+-+++.+
T Consensus 244 ~~~~--~~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~l---~~-~~~-----~~~~~l~i~G~g~~~--~~~~l~~~~~~ 308 (439)
T 3fro_A 244 SKFG--MDEG-VTFMFIGRFDRGQKGVDV-LLKAIEIL---SS-KKE-----FQEMRFIIIGKGDPE--LEGWARSLEEK 308 (439)
T ss_dssp HHHT--CCSC-EEEEEECCSSCTTBCHHH-HHHHHHHH---HT-SGG-----GGGEEEEEECCCCHH--HHHHHHHHHHH
T ss_pred HHcC--CCCC-cEEEEEcccccccccHHH-HHHHHHHH---Hh-ccc-----CCCeEEEEEcCCChh--HHHHHHHHHhh
Confidence 3445 4666 8999999999 9999888 76665554 32 110 125789999965422 11333333322
Q ss_pred HhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccc
Q 003072 642 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE 721 (850)
Q Consensus 642 va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~ 721 (850)
.+ + .|+|..-+.-+-...++.+||+....|+. |..|.+-+-+|.-|++.|+|-.|...|+.+.
T Consensus 309 ~~----------~--~~~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~--- 371 (439)
T 3fro_A 309 HG----------N--VKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDIITN--- 371 (439)
T ss_dssp CT----------T--EEEECSCCCHHHHHHHHTTCSEEEECBSC--CSSCHHHHHHHHTTCEEEEESSTHHHHHCCT---
T ss_pred cC----------C--EEEEcCCCCHHHHHHHHHHCCEEEeCCCC--CCccHHHHHHHHCCCCeEEcCCCCcceeEEc---
Confidence 22 2 45555547777777889999999988874 9999999999999999999988888877642
Q ss_pred cceeeecc
Q 003072 722 ENFFLFGA 729 (850)
Q Consensus 722 eN~f~fG~ 729 (850)
.+++++..
T Consensus 372 ~~g~~~~~ 379 (439)
T 3fro_A 372 ETGILVKA 379 (439)
T ss_dssp TTCEEECT
T ss_pred CceEEeCC
Confidence 37777753
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.18 E-value=0.0012 Score=78.87 Aligned_cols=144 Identities=12% Similarity=0.048 Sum_probs=102.3
Q ss_pred HcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCC---CcHHHHHHHHHHH
Q 003072 564 KTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFIT 640 (850)
Q Consensus 564 ~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P---~y~~aK~iIk~I~ 640 (850)
..|...+++...++++=|+..+|...+ ++..+.++.+.. ....+++.|...+ .+...+...+.+.
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~-----------~~v~LvIvG~g~~~~~~~~e~~~~~~~L~ 630 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR-----------ELANLVVVGGDRRKESKDNEEKAEMKKMY 630 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH-----------HHCEEEEECCCTTSCCCCHHHHHHHHHHH
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC-----------CCeEEEEEeCCCcccccchhhHHHHHHHH
Confidence 456556889999999999999999888 777666543321 1346777776652 3444444444444
Q ss_pred HHhhhhcCCcCCCCcceEEEec---CC--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccc
Q 003072 641 DVGATVNHDPEIGDLLKVIFVP---DY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 715 (850)
Q Consensus 641 ~va~~vn~Dp~i~~~lkVvFle---nY--~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi 715 (850)
+.++.. .+.+ +|.|+. |+ .-.+.+.+-.++|+-...|. .|+.|.+-+-||.-|++.|+|-.|...|+
T Consensus 631 ~li~~l----gL~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~Ei 702 (816)
T 3s28_A 631 DLIEEY----KLNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEI 702 (816)
T ss_dssp HHHHHT----TCBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHH
T ss_pred HHHHHc----CCCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHH
Confidence 444422 2334 788886 22 13456666668999999876 59999999999999999999999999988
Q ss_pred cccccccceeeecc
Q 003072 716 RQEVGEENFFLFGA 729 (850)
Q Consensus 716 ~e~~g~eN~f~fG~ 729 (850)
.+.. +|+++|..
T Consensus 703 V~dg--~~Gllv~p 714 (816)
T 3s28_A 703 IVHG--KSGFHIDP 714 (816)
T ss_dssp CCBT--TTBEEECT
T ss_pred HccC--CcEEEeCC
Confidence 7554 78898865
No 12
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.06 E-value=0.005 Score=63.27 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=93.4
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003072 569 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 648 (850)
Q Consensus 569 ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 648 (850)
++++....+++-|+..+|+..+ ++..+.++.+- . ....+++.|.. |. ...+-+++..+
T Consensus 194 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~---~--------~~~~l~i~G~g-~~---~~~l~~~~~~~------ 251 (394)
T 3okp_A 194 FTDTTPVIACNSRLVPRKGQDS-LIKAMPQVIAA---R--------PDAQLLIVGSG-RY---ESTLRRLATDV------ 251 (394)
T ss_dssp CCTTCCEEEEESCSCGGGCHHH-HHHHHHHHHHH---S--------TTCEEEEECCC-TT---HHHHHHHTGGG------
T ss_pred CCcCceEEEEEeccccccCHHH-HHHHHHHHHhh---C--------CCeEEEEEcCc-hH---HHHHHHHHhcc------
Confidence 5677789999999999999888 77665554322 1 14578888863 21 12333333211
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCc-----cccCCCccchhhcccceEeeecccccccccccccccc
Q 003072 649 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG-----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 723 (850)
Q Consensus 649 Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag-----~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN 723 (850)
.+ +|.|+....-+-...++..||+....|+.+ .|+.|++-+-+|.-|++.|+|--|...|+.+. .+
T Consensus 252 ----~~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~---~~ 322 (394)
T 3okp_A 252 ----SQ--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP---AT 322 (394)
T ss_dssp ----GG--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT---TT
T ss_pred ----cC--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc---CC
Confidence 12 699998866566667889999999988873 49999999999999999999988888887643 27
Q ss_pred eeeecc
Q 003072 724 FFLFGA 729 (850)
Q Consensus 724 ~f~fG~ 729 (850)
++++..
T Consensus 323 g~~~~~ 328 (394)
T 3okp_A 323 GLVVEG 328 (394)
T ss_dssp EEECCT
T ss_pred ceEeCC
Confidence 777753
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.95 E-value=0.0042 Score=65.09 Aligned_cols=125 Identities=14% Similarity=0.081 Sum_probs=86.9
Q ss_pred CcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCc--HHHHHHHHHHHHHhhhhcCC
Q 003072 572 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY--VQAKRIVKFITDVGATVNHD 649 (850)
Q Consensus 572 d~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y--~~aK~iIk~I~~va~~vn~D 649 (850)
+....+++=|+..+|+..+ ++..+.++.+- . ....+++.|...+.+ ..-+.+-+++.+.+
T Consensus 183 ~~~~il~vGr~~~~Kg~~~-li~a~~~l~~~---~--------~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~------ 244 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDI-YVLAAARFISK---Y--------PDAKVRFLCNSHHESKFDLHSIALRELVASG------ 244 (413)
T ss_dssp TSEEEECCSCSSGGGTHHH-HHHHHHHHHHH---C--------TTCCEEEEEECCTTCSCCHHHHHHHHHHHHT------
T ss_pred CceEEEEcCCCchhcCcHH-HHHHHHHHHHh---C--------CCcEEEEEeCCcccchhhHHHHHHHHHHHcC------
Confidence 7889999999999999988 77776664322 1 134677777665432 22345555554443
Q ss_pred cCCCCc----ceEEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 003072 650 PEIGDL----LKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 718 (850)
Q Consensus 650 p~i~~~----lkVvFlenY-~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~ 718 (850)
+.++ -+||++..| +-+-...++.+||+-...|. .|..|.+-+-||.-|++.|+|--|...|+.++
T Consensus 245 --l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 314 (413)
T 3oy2_A 245 --VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314 (413)
T ss_dssp --CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT
T ss_pred --cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc
Confidence 2221 025555554 44445567899999999776 69999999999999999999988888877653
No 14
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.93 E-value=0.0049 Score=64.98 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=94.5
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003072 569 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 648 (850)
Q Consensus 569 ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 648 (850)
++++....+++-|+..+|...+ ++..+.++.+- .|. ....+++.|...+.....+.+.+++.+.+
T Consensus 239 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~---~p~------~~~~l~i~G~~~~~g~~~~~l~~~~~~~~----- 303 (438)
T 3c48_A 239 IPLHTKVVAFVGRLQPFKGPQV-LIKAVAALFDR---DPD------RNLRVIICGGPSGPNATPDTYRHMAEELG----- 303 (438)
T ss_dssp CCSSSEEEEEESCBSGGGCHHH-HHHHHHHHHHH---CTT------CSEEEEEECCBC------CHHHHHHHHTT-----
T ss_pred CCCCCcEEEEEeeecccCCHHH-HHHHHHHHHhh---CCC------cceEEEEEeCCCCCCcHHHHHHHHHHHcC-----
Confidence 5677888999999999998887 76655544221 110 13678888874332223344555554432
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceeeec
Q 003072 649 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 728 (850)
Q Consensus 649 Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f~fG 728 (850)
+.+ +|.|+....-+-...++..||+-...|. .|..|++-+-+|.-|++.|+|--|...|+.+.. ++++++.
T Consensus 304 ---l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 374 (438)
T 3c48_A 304 ---VEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEG--ETGLLVD 374 (438)
T ss_dssp ---CTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBT--TTEEEES
T ss_pred ---CCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCC--CcEEECC
Confidence 223 6889887655556678899999988775 599999999999999999999888888877543 6788875
Q ss_pred c
Q 003072 729 A 729 (850)
Q Consensus 729 ~ 729 (850)
.
T Consensus 375 ~ 375 (438)
T 3c48_A 375 G 375 (438)
T ss_dssp S
T ss_pred C
Confidence 3
No 15
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.71 E-value=0.0032 Score=59.41 Aligned_cols=131 Identities=15% Similarity=0.071 Sum_probs=95.0
Q ss_pred CCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhh
Q 003072 566 GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGAT 645 (850)
Q Consensus 566 g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~ 645 (850)
+..++++..+.+++-|+..+|+..+ ++..+.++ . ...+++.|..... ..+.+++.+...
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l---~------------~~~l~i~G~~~~~----~~l~~~~~~~~~- 74 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKKL---Q------------DEKLYIVGWFSKG----DHAERYARKIMK- 74 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHHC---T------------TSCEEEEBCCCTT----STHHHHHHHHHH-
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHhC---C------------CcEEEEEecCccH----HHHHHHHHhhhc-
Confidence 4568888899999999999999877 65443332 1 3457777764332 234444442211
Q ss_pred hcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccccccee
Q 003072 646 VNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 725 (850)
Q Consensus 646 vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f 725 (850)
.+.+ +|.|+...+-+-...++..||+-...|+ .|..|++-+-+|.-|++.|+|-.|...|+.+.. .+++
T Consensus 75 -----~l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~ 143 (177)
T 2f9f_A 75 -----IAPD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINE--KTGY 143 (177)
T ss_dssp -----HSCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBT--TTEE
T ss_pred -----ccCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCC--CccE
Confidence 1223 6888888776667788999999998776 789999999999999999999888888877653 6888
Q ss_pred eec
Q 003072 726 LFG 728 (850)
Q Consensus 726 ~fG 728 (850)
++.
T Consensus 144 ~~~ 146 (177)
T 2f9f_A 144 LVN 146 (177)
T ss_dssp EEC
T ss_pred EeC
Confidence 883
No 16
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.57 E-value=0.0054 Score=63.99 Aligned_cols=128 Identities=20% Similarity=0.236 Sum_probs=87.3
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003072 569 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 648 (850)
Q Consensus 569 ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 648 (850)
++++....+++-|+..+|...+ ++..+.+ +++ . .|..+++.|.. |. ...+.+++.+.+
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~~-~--------~~~~l~i~G~g-~~---~~~l~~~~~~~~----- 264 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQD-VVQAFAK---IVT-E--------VDAKLLLVGDG-PE---FCTILQLVKNLH----- 264 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHH-HHHHHHH---HHH-S--------SCCEEEEECCC-TT---HHHHHHHHHTTT-----
T ss_pred CCCCCeEEEEeeccccccCHHH-HHHHHHH---HHh-h--------CCCEEEEECCc-hH---HHHHHHHHHHcC-----
Confidence 4566778889999999998877 6654443 432 1 25688888853 21 234444443332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceeeec
Q 003072 649 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 728 (850)
Q Consensus 649 Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f~fG 728 (850)
+.+ +|.|+. + .+-...++..||+....|. .|+.|++-+-+|..|++.|+|--|...|+.+.. ++++++.
T Consensus 265 ---l~~--~v~~~g-~-~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~--~~g~~~~ 333 (394)
T 2jjm_A 265 ---IED--RVLFLG-K-QDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG--DTGYLCE 333 (394)
T ss_dssp ---CGG--GBCCCB-S-CSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT--TTEEEEC
T ss_pred ---CCC--eEEEeC-c-hhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC--CceEEeC
Confidence 222 577776 3 3334567789999998776 699999999999999999999888888877543 6888875
Q ss_pred c
Q 003072 729 A 729 (850)
Q Consensus 729 ~ 729 (850)
.
T Consensus 334 ~ 334 (394)
T 2jjm_A 334 V 334 (394)
T ss_dssp T
T ss_pred C
Confidence 3
No 17
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.53 E-value=0.011 Score=64.25 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=95.6
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccC-CC--CcH----H----HHHHHH
Q 003072 569 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FA--TYV----Q----AKRIVK 637 (850)
Q Consensus 569 ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA-~P--~y~----~----aK~iIk 637 (850)
++++..+.+++=|+...|...+ ++..+.++.+-. + ....++++|.. .| .|. . -+.+.+
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~~---~-------~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~ 326 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYG-LVEAYVQNKELQ---D-------KANLVLTLRGIENPFEDYSRAGQEEKEILGKIIE 326 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHHH---H-------HCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHH
T ss_pred cCCCCcEEEEeecCccccCHHH-HHHHHHHHHHhC---C-------CceEEEEECCCCCcccccccccccchHHHHHHHH
Confidence 4567778999999999999888 766655543221 1 13467777762 22 111 1 445555
Q ss_pred HHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeecccccc
Q 003072 638 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 713 (850)
Q Consensus 638 ~I~~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~----Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nv 713 (850)
++.+.+ +.+ +|.|+...+-+-...++.+| |+-...|. .|..|.+-+-+|.-|++.|+|--|...
T Consensus 327 ~~~~~~--------l~~--~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~ 394 (499)
T 2r60_A 327 LIDNND--------CRG--KVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPA 394 (499)
T ss_dssp HHHHTT--------CBT--TEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHH
T ss_pred HHHhcC--------CCc--eEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHH
Confidence 554433 233 69998876556666788999 99998776 499999999999999999999888888
Q ss_pred cccccccccceeeecc
Q 003072 714 EIRQEVGEENFFLFGA 729 (850)
Q Consensus 714 Ei~e~~g~eN~f~fG~ 729 (850)
|+.+.. +|++++..
T Consensus 395 e~v~~~--~~g~l~~~ 408 (499)
T 2r60_A 395 EILDGG--KYGVLVDP 408 (499)
T ss_dssp HHTGGG--TSSEEECT
T ss_pred HHhcCC--ceEEEeCC
Confidence 877543 68888854
No 18
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.46 E-value=0.011 Score=55.81 Aligned_cols=135 Identities=17% Similarity=0.075 Sum_probs=92.2
Q ss_pred HHHcCCcCCCCccccccccccc-ccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHH
Q 003072 562 KEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 640 (850)
Q Consensus 562 ~~~~g~~ldpd~lfd~~~kR~h-eYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 640 (850)
+++.|. +++. +.+++-|+. .+|...+ ++..+.+ ++. +.. ..+.++++.|...|.+ .+.+.+++.
T Consensus 28 r~~~~~--~~~~-~i~~~G~~~~~~K~~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~~~~~~--~~~l~~~~~ 92 (200)
T 2bfw_A 28 LSKFGM--DEGV-TFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPEL--EGWARSLEE 92 (200)
T ss_dssp HHHTTC--CSCE-EEEEESCBCSSSSCHHH-HHHHHHH---HTT-SGG-----GGGEEEEEECCBCHHH--HHHHHHHHH
T ss_pred HHHcCC--CCCC-EEEEeeccccccCCHHH-HHHHHHH---HHh-hcc-----CCCeEEEEECCCChHH--HHHHHHHHH
Confidence 445564 3333 778899999 9998877 6655444 320 000 1256888888754422 233333332
Q ss_pred HHhhhhcCCcCCCCcceEEE-ecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc
Q 003072 641 DVGATVNHDPEIGDLLKVIF-VPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 719 (850)
Q Consensus 641 ~va~~vn~Dp~i~~~lkVvF-lenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~ 719 (850)
... +|.| +...+-+-...++..||+....|+. |..|++-+-+|..|++.|+|--|...|+.
T Consensus 93 ~~~-------------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~--e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~--- 154 (200)
T 2bfw_A 93 KHG-------------NVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDII--- 154 (200)
T ss_dssp HCT-------------TEEEECSCCCHHHHHHHHTTCSEEEECCSC--CSSCHHHHHHHHTTCEEEEESCHHHHHHC---
T ss_pred hcC-------------CEEEEeccCCHHHHHHHHHHCCEEEECCCC--CCccHHHHHHHHCCCCEEEeCCCChHHHc---
Confidence 221 5888 7766555667888999999997765 99999999999999999999888888776
Q ss_pred cccceeeecc
Q 003072 720 GEENFFLFGA 729 (850)
Q Consensus 720 g~eN~f~fG~ 729 (850)
...+++++..
T Consensus 155 ~~~~g~~~~~ 164 (200)
T 2bfw_A 155 TNETGILVKA 164 (200)
T ss_dssp CTTTCEEECT
T ss_pred CCCceEEecC
Confidence 3478888853
No 19
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.73 E-value=0.019 Score=58.71 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=91.5
Q ss_pred CCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 003072 569 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 648 (850)
Q Consensus 569 ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 648 (850)
++++....+++-|+..+|+..+ ++..+.++.+- .. .+..+++.|.... +.+.+++.+.+
T Consensus 192 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~------~~----~~~~l~i~G~g~~-----~~~~~~~~~~~----- 250 (374)
T 2iw1_A 192 IKEQQNLLLQVGSDFGRKGVDR-SIEALASLPES------LR----HNTLLFVVGQDKP-----RKFEALAEKLG----- 250 (374)
T ss_dssp CCTTCEEEEEECSCTTTTTHHH-HHHHHHTSCHH------HH----HTEEEEEESSSCC-----HHHHHHHHHHT-----
T ss_pred CCCCCeEEEEeccchhhcCHHH-HHHHHHHhHhc------cC----CceEEEEEcCCCH-----HHHHHHHHHcC-----
Confidence 5667788889999999999887 65544332111 00 1568888888431 34555555443
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceeeec
Q 003072 649 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 728 (850)
Q Consensus 649 Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f~fG 728 (850)
+.+ +|.|+.. .+-...++..||+-...|. .|+.|++-+-+|.-|++.|+|--|...|+.++. ++++++.
T Consensus 251 ---~~~--~v~~~g~--~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~ 319 (374)
T 2iw1_A 251 ---VRS--NVHFFSG--RNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA--NCGTVIA 319 (374)
T ss_dssp ---CGG--GEEEESC--CSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH--TCEEEEC
T ss_pred ---CCC--cEEECCC--cccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccC--CceEEeC
Confidence 112 6888874 3445667899999998776 599999999999999999999888888876553 7888886
No 20
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=95.67 E-value=0.032 Score=57.67 Aligned_cols=125 Identities=10% Similarity=0.071 Sum_probs=86.3
Q ss_pred Ccccccccccc-cccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003072 572 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 650 (850)
Q Consensus 572 d~lfd~~~kR~-heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 650 (850)
+....+++-|+ ..+|...+ ++..+.+ +++ . .....+++.|... . +.+.+++.++
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~~---l~~-~-------~~~~~l~i~G~~~---~--~~l~~~~~~~-------- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALPK---LVA-R-------FPDVEILIVGRGD---E--DELREQAGDL-------- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHHH---HHT-T-------STTCEEEEESCSC---H--HHHHHHTGGG--------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHHH---HHH-H-------CCCeEEEEEcCCc---H--HHHHHHHHhc--------
Confidence 45678889999 99999877 6654443 432 1 1246788888743 2 4444444322
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceeeec
Q 003072 651 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 728 (850)
Q Consensus 651 ~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f~fG 728 (850)
.+ +|.|+...+=.-...++..||+-...|. ..|..|++-+-+|..|++.|+|--|...|+.+.. +++++|.
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 332 (406)
T 2gek_A 262 --AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADG--DAGRLVP 332 (406)
T ss_dssp --GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTT--TSSEECC
T ss_pred --cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCC--CceEEeC
Confidence 12 6888876544444677889999998654 3689999999999999999999878777766532 6677764
No 21
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=95.20 E-value=0.055 Score=49.52 Aligned_cols=112 Identities=19% Similarity=0.157 Sum_probs=77.1
Q ss_pred ccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003072 574 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 653 (850)
Q Consensus 574 lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~ 653 (850)
+..+++=|+..+|...+ ++..+.++ ++ . .+..+++.|.. |. .+.+.+++.+.+-
T Consensus 3 ~~i~~~G~~~~~Kg~~~-li~a~~~l---~~-~--------~~~~l~i~G~g-~~---~~~~~~~~~~~~~--------- 56 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSV-LIKAVALS---KY-K--------QDIVLLLKGKG-PD---EKKIKLLAQKLGV--------- 56 (166)
T ss_dssp EEEEEESCCSTTTTHHH-HHHHHHTC---TT-G--------GGEEEEEECCS-TT---HHHHHHHHHHHTC---------
T ss_pred eEEEEEeccchhcCHHH-HHHHHHHh---cc-C--------CCeEEEEEeCC-cc---HHHHHHHHHHcCC---------
Confidence 45678889999999887 66655442 21 1 25678888863 22 2445555544431
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccc-eEeeecc-cccccccc
Q 003072 654 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC-ILIGTLD-GANVEIRQ 717 (850)
Q Consensus 654 ~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~-l~lstlD-G~nvEi~e 717 (850)
+|.| .-.+-+-...++..||+....|+ .|..|.+-+-+|..|+ +.|+|-+ |..-|+.+
T Consensus 57 ---~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~ 116 (166)
T 3qhp_A 57 ---KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFAL 116 (166)
T ss_dssp ---EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCS
T ss_pred ---eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhcc
Confidence 4666 44445556778899999998776 6999999999999997 9999654 45555543
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=94.07 E-value=0.081 Score=54.03 Aligned_cols=128 Identities=19% Similarity=0.112 Sum_probs=88.3
Q ss_pred CcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 003072 572 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 651 (850)
Q Consensus 572 d~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~ 651 (850)
+..+.+++-|+..+|...+ ++..+.++ +..+++.|.. |... .+-+++..++
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~~----------------~~~l~i~G~g-~~~~---~l~~~~~~~~-------- 211 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHAC----------------GRRLVLAGPA-WEPE---YFDEITRRYG-------- 211 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHHH----------------TCCEEEESCC-CCHH---HHHHHHHHHT--------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHhc----------------CcEEEEEeCc-ccHH---HHHHHHHHhC--------
Confidence 4457888999999999887 66554332 2357777765 3222 2223332222
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCC--------ccccCCCccchhhcccceEeeecccccccccccccccc
Q 003072 652 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTA--------GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 723 (850)
Q Consensus 652 i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~a--------g~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN 723 (850)
+ +|.|+..-+=.-...++..||+....|+. -.|..|++-+-+|.-|++.|+|--|...|+.+..|+++
T Consensus 212 --~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~ 287 (342)
T 2iuy_A 212 --S--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVV 287 (342)
T ss_dssp --T--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEEC
T ss_pred --C--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCc
Confidence 2 68887765444446778999999887761 16999999999999999999999899888886633478
Q ss_pred eeeeccchh
Q 003072 724 FFLFGARAH 732 (850)
Q Consensus 724 ~f~fG~~~~ 732 (850)
+++|..+.+
T Consensus 288 g~~~~~d~~ 296 (342)
T 2iuy_A 288 GYGTDFAPD 296 (342)
T ss_dssp CSSSCCCHH
T ss_pred eEEcCCCHH
Confidence 888765333
No 23
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=90.34 E-value=2.3 Score=46.65 Aligned_cols=104 Identities=12% Similarity=0.067 Sum_probs=68.8
Q ss_pred cccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC-
Q 003072 575 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG- 653 (850)
Q Consensus 575 fd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~- 653 (850)
+.+++-|+.. |.... ++..+.++ ++-. ....+++.|..-| .-..+.+++.+.+ +.
T Consensus 378 ~v~~~g~~~~-K~~~~-li~a~~~l---~~~~--------~~~~l~i~G~~g~---~~~~l~~~~~~~~--------l~~ 433 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQ-SMARMLAV---LREV--------PDSVLWLLSGPGE---ADARLRAFAHAQG--------VDA 433 (568)
T ss_dssp CEEEECCCGG-GCCHH-HHHHHHHH---HHHC--------TTCEEEEECCSTT---HHHHHHHHHHHTT--------CCG
T ss_pred EEEEeCCccc-cCCHH-HHHHHHHH---HHhC--------CCcEEEEecCCHH---HHHHHHHHHHHcC--------CCh
Confidence 3447888888 98877 66655544 3201 1356777775222 2244445554433 22
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeee
Q 003072 654 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGT 707 (850)
Q Consensus 654 ~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lst 707 (850)
+ +|+|+.--+-.-...++.+|||....|.. ..|++-+-+|.-|++.|+.
T Consensus 434 ~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G~Pvv~~ 482 (568)
T 2vsy_A 434 Q--RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTGCPVLTT 482 (568)
T ss_dssp G--GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEBC
T ss_pred h--HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCCCCEEec
Confidence 3 79998865433445678999999988775 7899999999999999994
No 24
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=88.17 E-value=7.5 Score=43.52 Aligned_cols=142 Identities=7% Similarity=0.005 Sum_probs=86.0
Q ss_pred CcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcH-HHHHHHHHHHHHhhhhcCCc
Q 003072 572 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDP 650 (850)
Q Consensus 572 d~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~-~aK~iIk~I~~va~~vn~Dp 650 (850)
+..+++++=|+...|.... +|.-+.++.+- .|..+ ..+++|..|....++. .-..+-+.+.+++..+|..-
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~~---~p~~~----~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~ 325 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALLEK---YPQHH----GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKY 325 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHHH---CGGGT----TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHHHh---Ccccc----CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhc
Confidence 4457888999999998887 77776665322 33322 2466777665433332 12234445555544444211
Q ss_pred CCCCcceEEEec-CCChhhhhhhccccccccccCCCccccCCCccchhhccc------ceEeeecccccccccccccccc
Q 003072 651 EIGDLLKVIFVP-DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNG------CILIGTLDGANVEIRQEVGEEN 723 (850)
Q Consensus 651 ~i~~~lkVvFle-nY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG------~l~lstlDG~nvEi~e~~g~eN 723 (850)
...+.-.|+|+. ...-+--..+..+|||-...|. .|.-|..-+-||.-| .+.+|..-|..-|+ ++
T Consensus 326 g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l------~~ 397 (482)
T 1uqt_A 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL------TS 397 (482)
T ss_dssp CBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC------TT
T ss_pred ccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh------CC
Confidence 111122488764 3344445578999999999987 487777777777655 57777777876655 26
Q ss_pred eeeecc
Q 003072 724 FFLFGA 729 (850)
Q Consensus 724 ~f~fG~ 729 (850)
++++..
T Consensus 398 g~lv~p 403 (482)
T 1uqt_A 398 ALIVNP 403 (482)
T ss_dssp SEEECT
T ss_pred eEEECC
Confidence 677643
No 25
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=85.55 E-value=1.9 Score=44.15 Aligned_cols=124 Identities=10% Similarity=0.055 Sum_probs=70.3
Q ss_pred CCccccccccccccc-ccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003072 571 PDAMFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 649 (850)
Q Consensus 571 pd~lfd~~~kR~heY-KRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 649 (850)
++..+.+++-|+.+. |.... ++..+. ++++ + ....++|++ .+|.. .+.+.+.+... .
T Consensus 204 ~~~~vl~~~gr~~~~~K~~~~-li~a~~---~l~~-----~---~~~~~~i~~--~g~~~----~~~~~~~~~~~---~- 261 (375)
T 3beo_A 204 NNRLVLMTAHRRENLGEPMRN-MFRAIK---RLVD-----K---HEDVQVVYP--VHMNP----VVRETANDILG---D- 261 (375)
T ss_dssp TSEEEEEECCCGGGTTHHHHH-HHHHHH---HHHH-----H---CTTEEEEEE--CCSCH----HHHHHHHHHHT---T-
T ss_pred CCCeEEEEecccccchhHHHH-HHHHHH---HHHh-----h---CCCeEEEEe--CCCCH----HHHHHHHHHhh---c-
Confidence 344556678888765 76544 544433 3432 0 112456665 34532 12222322211 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceeeec
Q 003072 650 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFG 728 (850)
Q Consensus 650 p~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlD-G~nvEi~e~~g~eN~f~fG 728 (850)
.+ +|.|+....-.-...++.+||+-..-| |+.-+-||.-|.+.|+|-+ |...|+.+. .+++++.
T Consensus 262 ---~~--~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~---g~g~~v~ 326 (375)
T 3beo_A 262 ---YG--RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEA---GTLKLAG 326 (375)
T ss_dssp ---CT--TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHT---TSEEECC
T ss_pred ---cC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecC---CceEEcC
Confidence 12 588865443334456778999997543 4556789999999999966 666665432 2777775
Q ss_pred cch
Q 003072 729 ARA 731 (850)
Q Consensus 729 ~~~ 731 (850)
.+.
T Consensus 327 ~d~ 329 (375)
T 3beo_A 327 TDE 329 (375)
T ss_dssp SCH
T ss_pred CCH
Confidence 443
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=82.96 E-value=8.7 Score=39.45 Aligned_cols=65 Identities=17% Similarity=0.046 Sum_probs=44.2
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceeeeccch
Q 003072 657 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFGARA 731 (850)
Q Consensus 657 kVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlD-G~nvEi~e~~g~eN~f~fG~~~ 731 (850)
+|.|+..-.-.-...++.+||+-..-| |+.-+-+|.-|.+.|+|-. |...|+.+. .+++++..+.
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~---g~g~lv~~d~ 329 (384)
T 1vgv_A 264 NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA---GTVRLVGTDK 329 (384)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH---TSEEEECSSH
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC---CceEEeCCCH
Confidence 688864322234456779999977654 5557799999999999976 766665432 2777775533
No 27
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=59.47 E-value=25 Score=35.68 Aligned_cols=102 Identities=7% Similarity=-0.072 Sum_probs=61.6
Q ss_pred CCCc-ccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeE-EEEeccCCCCcHHHHHHHHHHHHHhhhhc
Q 003072 570 SPDA-MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRV-CIFGGKAFATYVQAKRIVKFITDVGATVN 647 (850)
Q Consensus 570 dpd~-lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~-~IFaGKA~P~y~~aK~iIk~I~~va~~vn 647 (850)
+++. .+.+.+.|+...|...+ ++..+.+ +.+ +.. ++++|... . +.+.+++.+.+
T Consensus 180 ~~~~~~il~~~g~~~~~k~~~~-li~a~~~---l~~-----------~~~~l~i~G~~~---~--~~l~~~~~~~~---- 235 (364)
T 1f0k_A 180 REGPVRVLVVGGSQGARILNQT-MPQVAAK---LGD-----------SVTIWHQSGKGS---Q--QSVEQAYAEAG---- 235 (364)
T ss_dssp CCSSEEEEEECTTTCCHHHHHH-HHHHHHH---HGG-----------GEEEEEECCTTC---H--HHHHHHHHHTT----
T ss_pred CCCCcEEEEEcCchHhHHHHHH-HHHHHHH---hcC-----------CcEEEEEcCCch---H--HHHHHHHhhcC----
Confidence 3443 34556788888887665 4444333 321 233 56777654 1 34444443322
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 003072 648 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 710 (850)
Q Consensus 648 ~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG 710 (850)
+ + +|.|+..- +-...++++||+-...| | |++-+-+|.-|++.|+|--|
T Consensus 236 ----~-~--~v~~~g~~--~~~~~~~~~ad~~v~~s--g----~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 236 ----Q-P--QHKVTEFI--DDMAAAYAWADVVVCRS--G----ALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp ----C-T--TSEEESCC--SCHHHHHHHCSEEEECC--C----HHHHHHHHHHTCCEEECCCC
T ss_pred ----C-C--ceEEecch--hhHHHHHHhCCEEEECC--c----hHHHHHHHHhCCCEEEeeCC
Confidence 1 1 47777643 33456778999988765 2 56667899999999999444
No 28
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=58.50 E-value=23 Score=38.21 Aligned_cols=123 Identities=10% Similarity=0.014 Sum_probs=77.6
Q ss_pred Ccccccccccc-cccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003072 572 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 650 (850)
Q Consensus 572 d~lfd~~~kR~-heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 650 (850)
+..+.+++=|+ .+.|...+ ++.-+.++.+- .|.. .+..++++|...... .+
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~-li~A~~~l~~~---~~~~-----~~~~l~ivG~~~~~~---------------~l---- 291 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTL-IVEALKIFVQK---YDRS-----NEWKIISVGEKHKDI---------------AL---- 291 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHH-HHHHHHHHHHH---CTTG-----GGCEEEEEESCCCCE---------------EE----
T ss_pred CCCEEEEEecCchhccCHHH-HHHHHHHHHHh---CCCC-----CceEEEEEcCCchhh---------------hc----
Confidence 33445566675 56676666 66555544221 1110 025677777643320 01
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceeeecc
Q 003072 651 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 729 (850)
Q Consensus 651 ~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi~e~~g~eN~f~fG~ 729 (850)
.+.+ +|.|+.--.-+-...++.+||+....|. .|.-|..-+-||.-|++.|++- |...|+.+. ++|++++-.
T Consensus 292 ~~~~--~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~--~~~G~lv~~ 363 (413)
T 2x0d_A 292 GKGI--HLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNK-YENKDLSNW--HSNIVSLEQ 363 (413)
T ss_dssp ETTE--EEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGT--BTTEEEESS
T ss_pred CCcC--cEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeC-CCcchhhhc--CCCEEEeCC
Confidence 1122 7889876555555677899999998876 3667888899999999999974 445677654 378998863
No 29
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=39.06 E-value=73 Score=36.23 Aligned_cols=137 Identities=13% Similarity=0.052 Sum_probs=81.5
Q ss_pred cccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcH-HHHHHHHHHHHHhhhhcCCcC
Q 003072 573 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDPE 651 (850)
Q Consensus 573 ~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~-~aK~iIk~I~~va~~vn~Dp~ 651 (850)
.-++.++-|+...|-... +|.-. ++. ++ .|.. ..+++|..|....++. .-+.+-+.|.+++..||..-
T Consensus 281 ~~lIl~VgRLd~~KGi~~-lL~Af-~ll--~~-~P~~-----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~- 349 (496)
T 3t5t_A 281 HRLVVHSGRTDPIKNAER-AVRAF-VLA--AR-GGGL-----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL- 349 (496)
T ss_dssp SEEEEEEEESSGGGCHHH-HHHHH-HHH--HH-TSSC-----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ceEEEEcccCccccCHHH-HHHHH-HHH--Hh-Cccc-----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc-
Confidence 457788999998887766 66655 442 22 3221 1346665554443332 23345555666655555210
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc----ccceEeeecccccccccccccccceeee
Q 003072 652 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM----NGCILIGTLDGANVEIRQEVGEENFFLF 727 (850)
Q Consensus 652 i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~am----NG~l~lstlDG~nvEi~e~~g~eN~f~f 727 (850)
+ ..+|+|+..-+.+---.+..+|||-..+|++ |-=|.--+-||. .|.+.+|..-|+--|+. ++++++
T Consensus 350 -g-~~~V~f~g~v~~~el~aly~~ADv~vv~Slr--EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-----~~allV 420 (496)
T 3t5t_A 350 -G-SDTVRIDNDNDVNHTIACFRRADLLIFNSTV--DGQNLSTFEAPLVNERDADVILSETCGAAEVLG-----EYCRSV 420 (496)
T ss_dssp -C-TTSEEEEECCCHHHHHHHHHHCSEEEECCSS--BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-----GGSEEE
T ss_pred -C-CcCEEEeCCCCHHHHHHHHHhccEEEECccc--ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-----CCEEEE
Confidence 0 1168888644444445788999999988885 444444444443 47899999888876652 456666
Q ss_pred cc
Q 003072 728 GA 729 (850)
Q Consensus 728 G~ 729 (850)
-.
T Consensus 421 nP 422 (496)
T 3t5t_A 421 NP 422 (496)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 30
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=37.63 E-value=81 Score=33.58 Aligned_cols=106 Identities=12% Similarity=0.070 Sum_probs=72.2
Q ss_pred ccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003072 574 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 653 (850)
Q Consensus 574 lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~ 653 (850)
...+++=|+..+|.. +..+++.. ....+++.|... . ....+.
T Consensus 223 ~~i~~vGrl~~~Kg~----------~~~l~~~~--------~~~~l~ivG~g~----------------~----~~~~l~ 264 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF----------FVVASKAF--------PQVTFHVIGSGM----------------G----RHPGYG 264 (406)
T ss_dssp EEEEEECCTTBCHHH----------HHHHHHHC--------TTEEEEEESCSS----------------C----CCTTCC
T ss_pred cEEEEEeccccccCH----------HHHHHHhC--------CCeEEEEEeCch----------------H----HhcCCC
Confidence 577889999999987 22232201 145788888532 1 122344
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhh-------cccceEeeecccccccccccccccceee
Q 003072 654 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFA-------MNGCILIGTLDGANVEIRQEVGEENFFL 726 (850)
Q Consensus 654 ~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~a-------mNG~l~lstlDG~nvEi~e~~g~eN~f~ 726 (850)
+ +|.|+.--.-+-...++.+||+-...|+ .|..|..-+-+| .-|.+.|+| |. + . +++++++
T Consensus 265 ~--~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas-~~--v--~---~~~~G~l 332 (406)
T 2hy7_A 265 D--NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCP-NA--V--V---GPYKSRF 332 (406)
T ss_dssp T--TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEE-GG--G--T---CSCSSEE
T ss_pred C--CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEe-hh--c--c---cCcceEE
Confidence 4 7999876554445567899999998776 588898888999 999999999 33 2 2 3467777
Q ss_pred -ecc
Q 003072 727 -FGA 729 (850)
Q Consensus 727 -fG~ 729 (850)
+-.
T Consensus 333 ~v~~ 336 (406)
T 2hy7_A 333 GYTP 336 (406)
T ss_dssp EECT
T ss_pred EeCC
Confidence 643
No 31
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=31.40 E-value=51 Score=30.06 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=31.5
Q ss_pred CCCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccc
Q 003072 241 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 282 (850)
Q Consensus 241 ~~~~~ihlNDtH---palai~ElmR~Lid~~gl~~~eAw~i~~~~ 282 (850)
+.++.||+.-|. +++++.-||+. .|+++++|++.+++.
T Consensus 81 ~~~VlVHC~~G~sRS~~~v~ayLm~~----~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 81 DGVVLVHSNAGVSRAAAIVIGFLMNS----EQTSFTSAFSLVKNA 121 (144)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHH----HCCCHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHHH----cCCCHHHHHHHHHHH
Confidence 357899999998 78888888764 599999999988765
No 32
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=31.28 E-value=2.6e+02 Score=28.50 Aligned_cols=52 Identities=17% Similarity=0.049 Sum_probs=33.1
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccc
Q 003072 657 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEI 715 (850)
Q Consensus 657 kVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlD-G~nvEi 715 (850)
+|.|+....-.-...++++||+-..-| |+--+-+|.-|.+.|.|-+ |...|+
T Consensus 256 ~v~~~g~~g~~~~~~~~~~ad~~v~~S-------~g~~lEA~a~G~PvI~~~~~~~~~~~ 308 (376)
T 1v4v_A 256 NFVLLDPLEYGSMAALMRASLLLVTDS-------GGLQEEGAALGVPVVVLRNVTERPEG 308 (376)
T ss_dssp TEEEECCCCHHHHHHHHHTEEEEEESC-------HHHHHHHHHTTCCEEECSSSCSCHHH
T ss_pred CEEEECCCCHHHHHHHHHhCcEEEECC-------cCHHHHHHHcCCCEEeccCCCcchhh
Confidence 688886332222345679999986433 3334488999999998744 444443
No 33
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=28.22 E-value=55 Score=30.83 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=31.5
Q ss_pred CCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccc
Q 003072 242 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 282 (850)
Q Consensus 242 ~~~~ihlNDtH---palai~ElmR~Lid~~gl~~~eAw~i~~~~ 282 (850)
.++.||+.-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 56889999998 7888888886 4699999999998865
No 34
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=27.80 E-value=70 Score=28.95 Aligned_cols=39 Identities=21% Similarity=0.346 Sum_probs=31.3
Q ss_pred CCCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccce
Q 003072 241 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRTV 283 (850)
Q Consensus 241 ~~~~~ihlNDtH---palai~ElmR~Lid~~gl~~~eAw~i~~~~~ 283 (850)
+.++.||+.-|. +++++.-||+ ..|+++++|++.+++.-
T Consensus 81 ~~~VlVHC~~G~~RS~~~~~aylm~----~~~~~~~~A~~~v~~~R 122 (144)
T 3ezz_A 81 RGRVLVHSQAGISRSATICLAYLMM----KKRVRLEEAFEFVKQRR 122 (144)
T ss_dssp TCCEEEEESSSSSHHHHHHHHHHHH----HHTCCHHHHHHHHHTTC
T ss_pred CCeEEEECCCCCChhHHHHHHHHHH----HcCCCHHHHHHHHHHHC
Confidence 357899999998 6677777665 46999999999988663
No 35
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=20.80 E-value=1.2e+02 Score=33.94 Aligned_cols=53 Identities=17% Similarity=0.259 Sum_probs=33.7
Q ss_pred CCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCHHHHHHhchhHHHHH
Q 003072 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEII 314 (850)
Q Consensus 241 ~~~~~ihlNDtHpalai~ElmR~Lid~~gl~~~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLpr~~~II 314 (850)
....+||++|-|. +.++.++|.+. .+..++||.|||.|.. + +-+.+|.+-+|+
T Consensus 122 ~~~DiV~vHdyhl-~~l~~~lr~~~-------------~~~~i~~~~H~pfp~~------~-~~~~lp~~~~il 174 (482)
T 1uqt_A 122 QDDDIIWIHDYHL-LPFAHELRKRG-------------VNNRIGFFLHIPFPTP------E-IFNALPTYDTLL 174 (482)
T ss_dssp CTTCEEEEESGGG-TTHHHHHHHTT-------------CCSCEEEECCSCCCCH------H-HHTTSTTHHHHH
T ss_pred CCCCEEEEECchH-HHHHHHHHHhC-------------CCCcEEEEEcCCCCCH------H-HHhhCccHHHHH
Confidence 3457999999997 45566666531 2456899999986532 2 233566655444
Done!