RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 003072
         (850 letters)



>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit
           (Oryctolagus cuniculus) [TaxId: 9986]}
          Length = 824

 Score =  462 bits (1191), Expect = e-151
 Identities = 181/433 (41%), Positives = 268/433 (61%), Gaps = 16/433 (3%)

Query: 423 EELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEF 482
             + +    DV    + +   +   + + MA+LC+ GSHAVNGVA IHSEI+   +F +F
Sbjct: 401 NRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDF 460

Query: 483 YKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDL 542
           Y+L P KFQNKTNG+TPRRW+  CNP L+ I+   +G E+++++  +L +L  + D+E  
Sbjct: 461 YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAF 519

Query: 543 QSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKM 602
                  K+ NK+K  ++++ +    ++P+++FD+QVKRIHEYKRQL+N L ++  Y ++
Sbjct: 520 IRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRI 579

Query: 603 KEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVP 662
           K+          VPR  + GGKA   Y  AK I+K IT +G  VNHDP +GD L+VIF+ 
Sbjct: 580 KKEPNK----FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635

Query: 663 DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 722
           +Y VS+AE +IPA++LS+ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E GEE
Sbjct: 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEE 695

Query: 723 NFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFGSYNYD---ELMGSLE 777
           NFF+FG R  ++  L +    ++  +       ++ + + SG F     D   +++  L 
Sbjct: 696 NFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLM 755

Query: 778 GNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 837
            +      D F V  D+  Y++CQE+V   Y + + WTRM I N A S KFSSDRTI +Y
Sbjct: 756 HH------DRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQY 809

Query: 838 ARDIWNIIPVELP 850
           AR+IW + P    
Sbjct: 810 AREIWGVEPSRQR 822



 Score =  384 bits (988), Expect = e-121
 Identities = 162/344 (47%), Positives = 222/344 (64%), Gaps = 8/344 (2%)

Query: 1   MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
           +EF  GR L N + NL L  A  EA  +LG  +E +   E DA LGNGGLGRLA+CFLDS
Sbjct: 76  LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 135

Query: 61  MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
           MATL   A+GYG+RY++G+F Q+I    Q E A+DWL  GNPWE  R + + PV FYG++
Sbjct: 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 195

Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
              S   + W+  + + A+ YD P+PGY+      +RLWS      DF+L  FN G + +
Sbjct: 196 EHTSQ-GAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWS-AKAPNDFNLKDFNVGGYIQ 253

Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANV 235
           A      AE I  +LYP D   EGK LRLKQ+Y + +A+LQDII RF+      R     
Sbjct: 254 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 313

Query: 236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEAL 295
           N++ FP+KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEAL
Sbjct: 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373

Query: 296 EKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 339
           E+W   L++ LLPRH++II  I++  ++ + + +   D D L +
Sbjct: 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFP-GDVDRLRR 416


>d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 876

 Score =  456 bits (1175), Expect = e-148
 Identities = 193/499 (38%), Positives = 285/499 (57%), Gaps = 31/499 (6%)

Query: 378 CDEEGGPVDEELESAQEDGV-----LEEESTDVVPDDELENCDEEGGPVDEELESEQEDD 432
            D E     E  +   +        + +E+ +  P     +       +  ++     +D
Sbjct: 379 VDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLED 438

Query: 433 VLEEEKEAEAVQE---------PPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFY 483
           V ++  +   +           P + +RMA L +VGSH VNGV E+HSE++   +F +F 
Sbjct: 439 VAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFI 498

Query: 484 KLW-PEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLG--TEDWVTNTGKLAELRKFADNE 540
           K + P KF N TNG+TPRRW++  NP L+ +++  L   TE+++ +  KL +L K+ +++
Sbjct: 499 KFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDK 558

Query: 541 DLQSQFRAAKRNNKMKVVSFIKEKT------GYSVSPDAMFDIQVKRIHEYKRQLMNILG 594
           +   ++   K NNK+++V  IK++             D +FD+QVKRIHEYKRQ +N+ G
Sbjct: 559 EFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFG 618

Query: 595 IVYRYKKMKEM-----SAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 649
           I+YRY  MK M     S  E   K+  +V IFGGK+   Y  AK I+K I  V   VN+D
Sbjct: 619 IIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNND 678

Query: 650 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD 709
             I  LLKV+FV DYNVS AE++IPAS+LS+HISTAG EASGTSNMKF MNG ++IGT+D
Sbjct: 679 ESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVD 738

Query: 710 GANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNY 769
           GANVEI +E+GE+N FLFG  +  +  LR           +  + V  +++SG F   N 
Sbjct: 739 GANVEITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENP 798

Query: 770 DELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKF 828
           +E    ++  +  G  DY+LV  DF SYL   E VD+ + +Q+  W + S+++ A    F
Sbjct: 799 NEFKPLVDSIKYHG--DYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFF 856

Query: 829 SSDRTIQEYARDIWNIIPV 847
           SSDR I+EY+  IWN+ PV
Sbjct: 857 SSDRCIEEYSDTIWNVEPV 875



 Score =  407 bits (1048), Expect = e-129
 Identities = 183/357 (51%), Positives = 228/357 (63%), Gaps = 23/357 (6%)

Query: 1   MEFLQGRALLNAIGNLGLTGA-------------YAEALSKLGQSLENVVSQEPDAALGN 47
           +EFL GRAL NA+ N+ +                   AL +LG  LE+V+ QEPDA LGN
Sbjct: 101 LEFLMGRALDNALINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGN 160

Query: 48  GGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIER 107
           GGLGRLA+CF+DSMAT   PAWGYGLRY+YG+F Q+I    Q E  + WL  GNPWEIER
Sbjct: 161 GGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIER 220

Query: 108 NDVSYPVKFYGKIVPGSDGK-----SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTM 162
           N+V  PV FYG +     GK     S WIGGE + AVAYD P+PG+KT    NLRLW   
Sbjct: 221 NEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLRLWQAR 280

Query: 163 VPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQD 222
            P+ +FDL+ FN GD+  +      AE I  +LYP D   +GK LRLKQQY  C+ASL D
Sbjct: 281 -PTTEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHD 339

Query: 223 IIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRT 282
           I+ RF+K       W EFP++VA+Q+NDTHPTL I EL R+L+DL+ L W EAW+I  +T
Sbjct: 340 ILRRFKKSKR---PWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKT 396

Query: 283 VAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 339
            AYTNHTV+ EALEKW   L   LLPRH+EII  I+   +  +  ++   D DLL +
Sbjct: 397 FAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFP-KDVDLLSR 452


>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP)
           {Escherichia coli [TaxId: 562]}
          Length = 796

 Score =  441 bits (1136), Expect = e-143
 Identities = 186/415 (44%), Positives = 270/415 (65%), Gaps = 14/415 (3%)

Query: 435 EEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKT 494
           +E+  A+      + V MANLCVVG  AVNGVA +HS++V  ++F E+++LWP KF N T
Sbjct: 389 DEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVT 448

Query: 495 NGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNK 554
           NG+TPRRWI+ CNP L+++L   L  ++W  +  +L  L KFAD+   + Q+R  K+ NK
Sbjct: 449 NGITPRRWIKQCNPALAALLDKSLQ-KEWANDLDQLINLEKFADDAKFRQQYREIKQANK 507

Query: 555 MKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKF 614
           +++  F+K +TG  ++P A+FDIQ+KR+HEYKRQ +N+L I+  YK+++E    +R    
Sbjct: 508 VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADR---- 563

Query: 615 VPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIP 674
           VPRV +FG KA   Y  AK I+  I  V   +N+DP +GD LKV+F+PDY VS AE LIP
Sbjct: 564 VPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP 623

Query: 675 ASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI 734
           A+++S+ ISTAG EASGT NMK A+NG + +GTLDGANVEI ++VGEEN F+FG    ++
Sbjct: 624 AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQV 683

Query: 735 AGLRKER--SEGKFVPDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFL 789
             +  +          D   + V K ++SG +     + +D+++ S+    G    D +L
Sbjct: 684 KAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSI----GKQGGDPYL 739

Query: 790 VGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 844
           V  DF +Y+E Q++VD  Y DQ+ WTR +I+NTA    FSSDR+I++Y   IW  
Sbjct: 740 VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQA 794



 Score =  370 bits (950), Expect = e-116
 Identities = 145/339 (42%), Positives = 194/339 (57%), Gaps = 9/339 (2%)

Query: 1   MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
           MEFL GR   N + NLG      ++L     +L +++ +E D ALGNGGLGRLA+CFLDS
Sbjct: 66  MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDS 125

Query: 61  MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
           MAT+   A GYGL Y+YGLF+Q      Q E  +DW     PW      +   V   GK+
Sbjct: 126 MATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKV 185

Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
               DG+  W     I   A+D+P+ GY+      LRLW        FDL+ FN GD  +
Sbjct: 186 TK--DGR--WEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHA-HPFDLTKFNDGDFLR 240

Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240
           A +   NAEK+  +LYP D + EGK LRL QQY  C+ S+ DI+ R            E 
Sbjct: 241 AEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLA---GRKLHEL 297

Query: 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 300
            +   +Q+NDTHPT+ IPEL+R+LID   +SW +AW IT +T AYTNHT++PEALE+W  
Sbjct: 298 ADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDV 357

Query: 301 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 339
           +L++ LLPRHM+II  I+     T+V +    D  +  K
Sbjct: 358 KLVKGLLPRHMQIINEINTRF-KTLVEKTWPGDEKVWAK 395


>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase
           (MetRS) {Escherichia coli [TaxId: 562]}
          Length = 350

 Score = 31.4 bits (70), Expect = 0.44
 Identities = 29/306 (9%), Positives = 82/306 (26%), Gaps = 27/306 (8%)

Query: 217 SASLQDIIARFEKRSGANV----NWEEFPEKV--AVQMNDTHP-TLCIPELIRILIDLKG 269
                D+  R+++  G  V      +     +    Q     P  +          D  G
Sbjct: 24  EHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAG 83

Query: 270 LSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 329
            +    ++    T              + + +L + +  R  E   + +  +      E 
Sbjct: 84  FNIS--YDNYHSTH------------SEENRQLSELIYSRLKENGFIKNRTISQLYDPEK 129

Query: 330 GT--ADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPD---DELENCDEEGGP 384
           G    D  ++       R  E+           ++    +  + +   ++++   E G  
Sbjct: 130 GMFLPDRFVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQ 189

Query: 385 VDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQ 444
             +    A   G     +        L+      G      +   +    +E  + ++  
Sbjct: 190 QWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTA 249

Query: 445 EPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKF-QNKTNGVTPRRWI 503
           E    +    +          +   +    +N   + +  +   K  +++   +    W+
Sbjct: 250 ELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWL 309

Query: 504 RFCNPD 509
              + D
Sbjct: 310 NHFDAD 315


>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
           tremula), thioredoxin H [TaxId: 113636]}
          Length = 113

 Score = 28.2 bits (62), Expect = 1.6
 Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 11/103 (10%)

Query: 540 EDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRY 599
           +  +  F   K + K+ VV F    T     P  M       + +    +  +   V   
Sbjct: 13  DTWKEHFEKGKGSQKLIVVDF----TASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDEL 68

Query: 600 KKMKEMSAVERKAKFVPRVCIF-GGKAFATYV--QAKRIVKFI 639
           K + E   V    + +P       GK     V      +   +
Sbjct: 69  KAVAEEWNV----EAMPTFIFLKDGKLVDKTVGADKDGLPTLV 107


>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos
           taurus) [TaxId: 9913]}
          Length = 177

 Score = 28.9 bits (65), Expect = 1.9
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 6/47 (12%)

Query: 657 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCI 703
            +I  P Y +  A+   P ++L +      +   G   ++F ++   
Sbjct: 20  SIIITPGYGLCAAKAQYPIADLVKM-----LSEQGK-KVRFGIHPVA 60


>d2b0ja1 a.100.1.11 (A:243-344) 5,10-methenyltetrahydromethanopterin
           hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii
           [TaxId: 2190]}
          Length = 102

 Score = 26.4 bits (58), Expect = 5.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 687 MEASGTSNMKFAMNGCILIGTLDGANVEIRQE 718
           M+  G +NM+ A++   L+GT D        E
Sbjct: 55  MKEKGIANMEEALDPAALLGTADSMCFGPLAE 86


>d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP
           {Escherichia coli [TaxId: 562]}
          Length = 369

 Score = 27.8 bits (60), Expect = 6.2
 Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 3/32 (9%)

Query: 220 LQDIIARFEKRSGANVN---WEEFPEKVAVQM 248
           L ++  +FEK +   V     ++  EK     
Sbjct: 20  LAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVA 51


>d1jeya1 b.131.1.1 (A:254-534) Ku70 subunit middle domain {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 281

 Score = 27.6 bits (61), Expect = 6.3
 Identities = 16/150 (10%), Positives = 30/150 (20%), Gaps = 17/150 (11%)

Query: 102 PWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTIN------ 155
             ++   D+   V  Y  +          +  E  + V          T   +       
Sbjct: 7   KLKLN-KDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKR 65

Query: 156 -LRLWSTMVPSEDFDLSAFNA-GDHTKAAEALTNAEKI--------CYILYPGDESVEGK 205
                S  +  E  +        D             +           +YP +  V G 
Sbjct: 66  SQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIGS 125

Query: 206 VLRLKQQYTLCSASLQDIIARFEKRSGANV 235
                     C       + R+  R     
Sbjct: 126 STLFSALLIKCLEKEVAALCRYTPRRNIPP 155


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0547    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,309,581
Number of extensions: 164950
Number of successful extensions: 428
Number of sequences better than 10.0: 1
Number of HSP's gapped: 405
Number of HSP's successfully gapped: 21
Length of query: 850
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 757
Effective length of database: 1,130,706
Effective search space: 855944442
Effective search space used: 855944442
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.1 bits)