BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003087
(849 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5TYW4|NBAS_DANRE Neuroblastoma-amplified sequence OS=Danio rerio GN=nbas PE=2 SV=1
Length = 2372
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 222/978 (22%), Positives = 363/978 (37%), Gaps = 182/978 (18%)
Query: 8 RKTKKQVS--LFISPRGERVAVAAVNQVTILQKDDDYQEPCGIFNCTGLGASIYG--AWS 63
R KQV+ L ++ G+ +AV V I DD+ G + AWS
Sbjct: 71 RLATKQVNWQLVLASNGKLLAVVQDQCVEIRSARDDFGSIIGKCQVPKDPNPHWRRVAWS 130
Query: 64 ESHDVLGIVDDTHTVYFFKANGEE---ITRFTNKHLKVSLPIIGLIAQDETDVQRSCLCS 120
+L D T TV F G E I + S GL+ + T +
Sbjct: 131 HDCALLAYADSTGTVRVFDLMGSELFIIPPAMSFPGDFSYAAAGLMFLEYTGSAQWS-AE 189
Query: 121 FTVFTSDGFLHQIEISQDPSASISSASASSSGLTLRRQFPQNVICTDYHPELSLLSVVSN 180
V T G L +S + + + + + YHP LL V
Sbjct: 190 LLVITYSGQLKSYLVS----VGTNQGFQENHTFSFSAHYSNGITTAIYHPGHRLLLVGGC 245
Query: 181 TDTSSLTSSGNSGPCCISLWRRCHNLEL--------EQLYTTQIEGLYCEP------KGH 226
S S + C I+ WR L + + ++Q G + P + +
Sbjct: 246 ESGDSDVSRASQ--CGITAWRVLSGLPHYKQVTSYEDDISSSQRRGFFKMPSFRLFSRHN 303
Query: 227 EVQLAHPKVLISPQGKFVATSDTNGCLYIFEMD----KDNFSLSKFACGERFDLQVADSL 282
Q ++ +SP G +A +G L ++++ + ++ + + + + SL
Sbjct: 304 GEQDGVFRMSLSPDGTILAVIHFSGSLSLWDIPSFKLRGSWKQEEQPGFDEINPEWKTSL 363
Query: 283 FDGRTKPISD------ITDFAWWSDNILILARKSSIITMIDVLS---------------- 320
+ K I D + D +WWS+ LILAR S +T+ V +
Sbjct: 364 --EKRKKIKDKEQYQSLLDVSWWSETALILARCSGALTVSSVRTLKNLLGKSCEWFEPSP 421
Query: 321 --------GLKVKETDPKLRGHVFLLESK------------------SVEERFNVSNYDR 354
G E + KL LES S + R+ Y +
Sbjct: 422 RVTSAHDGGFLSLECEVKLAHKRSRLESSVKGEEDDGDDDSDSDEEASAKARY--FGYVK 479
Query: 355 ETVYSNHTVQLIEERFNRSGNTMLYWSLISFSERSVPEMYNILISHRNYQTAIDFANYHG 414
+ +Y ++ R + + L+S + E+Y I + Y A+ A +G
Sbjct: 480 QGLYYVTEMERFAPPRKRPRTVIKNYRLVSLRSTTPEELYQRKIDNEEYGEALSLAQAYG 539
Query: 415 LDTDEVLKSQWLNSSQGTDEINMFLSKIKDQAFILSECVDKV------------------ 456
LD+D V + QW S+ I +LSKIK ++++L ECV++V
Sbjct: 540 LDSDLVYQRQWRKSTVSIASIQDYLSKIKKRSWVLHECVERVPENVDAAKELLQYGLKGT 599
Query: 457 --------GRTEDSAKALLAHGLHLTN--------------QYKFSETED-DEYSQIWDY 493
G ED + +L+ L + + Q K E++ E + D+
Sbjct: 600 DLEALIAIGAREDQGRFILSGDLDMDDAPYEDFLSMEEELEQRKERESKKRQELLKKVDF 659
Query: 494 RI----------ARLQLLQFGDRLETYLGINMGRYYAE-------YSKFRIMPIHEAGVN 536
+RL+LL + DRL TY I G + AE + KFR I +
Sbjct: 660 SKLTLEQKELCRSRLKLLCYLDRLATYEEILGGPHAAEQRFDGEFFKKFRNQNIVLSART 719
Query: 537 LAESGKIGALNLLFKRHPYSLASSVLQILAAIPETVPVQTYTQLLPGRS----------P 586
A + AL++LF H L L IL PET Y+ LLP P
Sbjct: 720 YARESNVQALDILFTYHGAELLQHRLAILCNFPETTSPHEYSDLLPKAGVDKEGNLVLIP 779
Query: 587 PMTVAMREEDWVECDKMVRFIRRLPENHEISD---QIRTEPIVRRSLRSLWPSINELTIW 643
R+ DW E V R + E + D +P + R RS P I LT W
Sbjct: 780 WEESRHRDLDWCE----VLECREVVEPKPMDDCQFLYEEQPELER-FRSADPFITLLTEW 834
Query: 644 YKSRARDIDCYSGQLDNCLCLIDFACRKGLTELQQFHEDTSYLYQLIYSDETDGEISFSM 703
Y +RA+DI+ +S Q+D L L+ + + L++ +D + L+Y D S+
Sbjct: 835 YLTRAQDIESHSRQVDCSLSLVRLGKEQNIPGLERLCDDLVTMETLVYETSCD----LSV 890
Query: 704 SLTAWEQLSDYEKFNTMLKGVKEENVIKRLRDKAIPFMQSRSHYLTSVGQEHVMVDQSSA 763
+L +QL D +K ++K E+ ++ +PF+ GQ V +S
Sbjct: 891 TLKELQQLRDIDKLRLLMKNSSEDRYVRNCFQWMVPFLHR------CEGQR---VGSAS- 940
Query: 764 DHEKDESFLVRWLKKIALENKVEICLLVIEEGCTEFQSKGFFRDESEAIDCALQCIYLCT 823
S L +L +A ++ + + L + + + K D + + AL+CIY C
Sbjct: 941 ------SLLREYLVTLA-KDDLTLPLKLFQHSKPDCHPK-IIGDSDQLMTVALKCIYSCE 992
Query: 824 ATDKWSTMAAILSKLPQK 841
D+ + +L LPQ+
Sbjct: 993 RDDQLALCYDVLECLPQR 1010
>sp|A2RRP1|NBAS_HUMAN Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2
Length = 2371
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 152/362 (41%), Gaps = 42/362 (11%)
Query: 497 RLQLLQFGDRLETY---LGINMG---RYYAEY-SKFRIMPIHEAGVNLAESGKIGALNLL 549
R +LL + DRL TY LG+ RY AE+ KFR I + A+ + AL +L
Sbjct: 685 RRKLLTYLDRLATYEEILGVPHASEQRYDAEFFKKFRNQNIVLSARTYAQESNVQALEIL 744
Query: 550 FKRHPYSLASSVLQILAAIPETVPVQTYTQLLP-----GRS----PPMTVAMREEDWVEC 600
F H L L IL+ PET Y+ LLP G S P R +DW C
Sbjct: 745 FTYHGSDLLPHRLAILSNFPETTSPHEYSVLLPEACFNGDSLMIIPWHEHKHRAKDW--C 802
Query: 601 DKMVRFIRRLPENHEISDQI-RTEPIVRRSLRSLWPSINELTIWYKSRARDIDCYSGQLD 659
+++ + P + S+ + +P + R R ++ ++ WY++RA +I+ Y+ Q+D
Sbjct: 803 EELACRMVVEPNLQDESEFLYAAQPELLR-FRMTQLTVEKVMDWYQTRAEEIEHYARQVD 861
Query: 660 NCLCLIDFACRKGLTELQQFHEDTSYLYQLIYSDETDGEISFSMSLTAWEQLSDYEKFNT 719
L LI + + L ++ L L+Y D +++L +Q+ D EK
Sbjct: 862 CALSLIRLGMERNIPGLLVLCDNLVTLETLVYEARCD----VTLTLKELQQMKDIEKLRL 917
Query: 720 MLKGVKEENVIKRLRDKAIPFMQSRSHYLTSVGQEHVMVDQSSADHEKDESFLVRWLKKI 779
++ E+ + +PF+ V E L +L +
Sbjct: 918 LMNSCSEDKYVTSAYQWMVPFLHRCEKQSPGVANE----------------LLKEYLVTL 961
Query: 780 ALENKVEICLLVIEEGCTEFQSKGFFRDESEAIDCALQCIYLCTATDKWSTMAAILSKLP 839
A + ++ L + + + Q K D+ + + AL+CIY C D+ +L LP
Sbjct: 962 A-KGDLKFPLKIFQHSKPDLQQK-IIPDQDQLMAIALECIYTCERNDQLCLCYDLLECLP 1019
Query: 840 QK 841
++
Sbjct: 1020 ER 1021
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 131/539 (24%), Positives = 205/539 (38%), Gaps = 80/539 (14%)
Query: 8 RKTKKQVS--LFISPRGERVAVAAVNQVTILQKDDDYQEPCGIFNCTGLGASIYG--AWS 63
R KQ++ L ++ G+ +A V I DD+ G + AWS
Sbjct: 82 RLVNKQINWHLVLASNGKLLAAVQDQCVEIRSAKDDFTSIIGKCQVPKDPKPQWRRVAWS 141
Query: 64 ESHDVLGIVDDTHTVYFFKANGEE---ITRFTNKHLKVSLPIIGLI-AQDETDVQRSCLC 119
+L + T TV F G E I+ ++ +S I GLI + + Q S
Sbjct: 142 YDCTLLAYAESTGTVRVFDLMGSELFVISPASSFIGDLSYAIAGLIFLEYKASAQWSA-- 199
Query: 120 SFTVFTSDGFLHQIEISQDPSASISSASASSSGLTLRRQFPQNVICTDYHPELSLLSVVS 179
V G L +S + + S + +P + YHP LL +V
Sbjct: 200 ELLVINYRGELRSYLVS----VGTNQSYQESHCFSFSSHYPHGINTAIYHPGHRLL-LVG 254
Query: 180 NTDTSSLTSSGNSGPCCISLWRRCHNLELEQLYTTQIEGLYCEPK--------------- 224
+T+ + S S C +S WR + T +G+ PK
Sbjct: 255 GCETAEVGMSKASS-CGLSAWRVLSGSPYYKQVTNGGDGVTAVPKTLGLLRMLSVKFYSR 313
Query: 225 -GHEVQLAHPKVLISPQGKFVATSDTNGCLYIFEMD--KDNFSLSKFACGERFDLQVADS 281
G E Q K+ +SP G +A +G L I+ + K + DL
Sbjct: 314 QGQE-QDGIFKMSLSPDGMLLAAIHFSGKLSIWAIPSLKQQGEWGQNEQPGYDDLNPDWR 372
Query: 282 LFDGRTKPISD------ITDFAWWSDNILILARKSSIITMIDVLS--------------- 320
L + K I D + D WW+D+ + LAR S +T+ V +
Sbjct: 373 LSTEKRKKIKDKESFYPLIDVNWWADSAVTLARCSGALTVSSVKTLKNLLGKSCEWFEPS 432
Query: 321 ---------GLKVKETDPKLRGHVFLLESKSVEER---------FNVSNYDRETVYSNHT 362
G E + KL LE+++ EE + +S R Y
Sbjct: 433 PQVTATHDGGFLSLECEIKLAPKRSRLETRAGEEDEGEEDSDSDYEISAKARYFGYIKQG 492
Query: 363 VQLIEE--RF----NRSGNTMLYWSLISFSERSVPEMYNILISHRNYQTAIDFANYHGLD 416
+ L+ E RF R + L+S + E+Y I Y+ A+ A+ +GLD
Sbjct: 493 LYLVTEMERFAPPRKRPRTITKNYRLVSLRSTTPEELYQRKIESEEYEEALSLAHTYGLD 552
Query: 417 TDEVLKSQWLNSSQGTDEINMFLSKIKDQAFILSECVDKVGRTEDSAKALLAHGLHLTN 475
TD V + QW S+ I +LSKIK ++++L EC+++V D+AK LL +GL T+
Sbjct: 553 TDLVYQRQWRKSAVNVASIQNYLSKIKKRSWVLHECLERVPENVDAAKELLQYGLKGTD 611
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 307,249,259
Number of Sequences: 539616
Number of extensions: 12789861
Number of successful extensions: 30551
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 30528
Number of HSP's gapped (non-prelim): 17
length of query: 849
length of database: 191,569,459
effective HSP length: 126
effective length of query: 723
effective length of database: 123,577,843
effective search space: 89346780489
effective search space used: 89346780489
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)