Query 003089
Match_columns 849
No_of_seqs 288 out of 772
Neff 4.3
Searched_HMMs 46136
Date Thu Mar 28 16:48:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003089.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003089hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 8E-266 2E-270 2253.8 73.0 832 1-849 1-852 (852)
2 PLN00150 potassium ion transpo 100.0 3E-249 7E-254 2116.6 66.9 755 62-849 9-779 (779)
3 PLN00148 potassium transporter 100.0 1E-245 2E-250 2088.6 67.1 745 77-849 1-785 (785)
4 PLN00149 potassium transporter 100.0 2E-244 4E-249 2080.4 69.4 748 77-849 1-779 (779)
5 TIGR00794 kup potassium uptake 100.0 1E-219 3E-224 1863.4 62.3 674 103-849 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 6E-195 1E-199 1639.5 53.2 594 102-849 11-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 7E-187 1E-191 1561.8 47.0 520 104-681 1-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 3E-178 7E-183 1471.9 50.7 598 99-848 14-626 (627)
9 TIGR00911 2A0308 L-type amino 89.7 2.2 4.8E-05 49.3 10.9 46 272-317 165-213 (501)
10 COG0531 PotE Amino acid transp 88.6 41 0.0009 37.7 19.6 173 271-457 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 86.8 42 0.00091 37.8 18.3 44 272-315 133-179 (429)
12 PRK10655 potE putrescine trans 85.5 53 0.0012 37.3 18.4 24 274-297 125-148 (438)
13 PRK11357 frlA putative fructos 74.1 1.6E+02 0.0035 33.6 17.4 44 273-316 128-174 (445)
14 TIGR00930 2a30 K-Cl cotranspor 70.8 2E+02 0.0043 37.1 18.6 62 435-499 402-463 (953)
15 PRK10435 cadB lysine/cadaverin 67.2 2.3E+02 0.0051 32.4 18.4 23 275-297 124-146 (435)
16 TIGR03813 put_Glu_GABA_T putat 64.8 2.7E+02 0.0058 32.3 16.8 19 557-575 434-452 (474)
17 PF14362 DUF4407: Domain of un 59.1 1.1E+02 0.0023 33.7 11.7 54 497-550 14-71 (301)
18 TIGR00906 2A0303 cationic amin 58.7 3.9E+02 0.0085 32.1 20.1 44 272-315 161-207 (557)
19 TIGR00905 2A0302 transporter, 53.7 3.3E+02 0.0072 31.5 15.1 43 415-457 278-320 (473)
20 TIGR00908 2A0305 ethanolamine 52.9 4E+02 0.0086 30.4 16.9 24 274-297 123-146 (442)
21 PF13520 AA_permease_2: Amino 50.7 1.3E+02 0.0029 33.6 11.0 222 272-513 118-366 (426)
22 PRK13108 prolipoprotein diacyl 46.2 26 0.00057 41.3 4.8 111 271-401 26-149 (460)
23 KOG3643 GABA receptor [Signal 45.4 16 0.00034 42.8 2.8 91 450-544 224-324 (459)
24 TIGR00907 2A0304 amino acid pe 44.8 1.6E+02 0.0036 33.9 10.9 26 557-582 454-479 (482)
25 KOG4742 Predicted chitinase [G 43.4 10 0.00023 42.0 1.0 34 369-408 172-207 (286)
26 PF06570 DUF1129: Protein of u 43.4 1.4E+02 0.003 31.3 9.1 21 556-576 179-199 (206)
27 COG4059 MtrE Tetrahydromethano 40.0 27 0.00059 37.7 3.3 31 552-582 257-287 (304)
28 PRK10644 arginine:agmatin anti 37.8 5.7E+02 0.012 29.3 13.7 24 274-297 127-150 (445)
29 PRK12361 hypothetical protein; 36.9 27 0.00058 41.5 3.0 74 357-433 12-85 (547)
30 PRK11021 putative transporter; 32.4 7.8E+02 0.017 27.8 18.9 28 272-299 115-142 (410)
31 KOG1834 Calsyntenin [Extracell 31.9 38 0.00082 41.6 3.1 13 5-17 865-877 (952)
32 PF05297 Herpes_LMP1: Herpesvi 31.9 15 0.00033 40.9 0.0 62 518-582 124-190 (381)
33 PF04931 DNA_pol_phi: DNA poly 31.8 27 0.00058 43.5 2.0 6 77-82 729-734 (784)
34 KOG0943 Predicted ubiquitin-pr 31.4 41 0.00089 43.9 3.4 22 357-378 2140-2164(3015)
35 PRK11049 D-alanine/D-serine/gl 31.4 6.9E+02 0.015 29.0 13.2 31 93-129 20-50 (469)
36 PRK15049 L-asparagine permease 30.4 9.6E+02 0.021 28.3 19.5 31 94-130 29-59 (499)
37 COG0814 SdaC Amino acid permea 26.5 7E+02 0.015 29.0 12.0 105 283-405 139-259 (415)
38 PF03115 Astro_capsid: Astrovi 23.1 28 0.0006 43.7 0.0 10 62-71 708-717 (787)
39 TIGR00913 2A0310 amino acid pe 23.1 1.2E+03 0.026 26.9 15.7 29 429-457 299-327 (478)
40 PRK13108 prolipoprotein diacyl 22.8 3E+02 0.0064 32.9 8.2 19 499-517 24-42 (460)
41 COG2179 Predicted hydrolase of 22.7 16 0.00035 38.0 -1.8 61 784-845 55-118 (175)
42 PF10446 DUF2457: Protein of u 21.6 38 0.00083 39.8 0.8 8 246-253 322-329 (458)
43 TIGR03810 arg_ornith_anti argi 20.8 1.3E+03 0.029 26.6 22.2 45 414-458 273-317 (468)
44 PRK14417 membrane protein; Pro 20.4 7.7E+02 0.017 27.1 10.1 17 490-506 101-117 (232)
45 PRK11909 cobalt transport prot 20.4 6.1E+02 0.013 27.5 9.3 64 385-448 143-211 (230)
46 cd05900 Ig_Aggrecan Immunoglob 20.0 96 0.0021 29.6 3.0 28 657-684 75-102 (112)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=8.5e-266 Score=2253.80 Aligned_cols=832 Identities=74% Similarity=1.160 Sum_probs=739.8
Q ss_pred CcccccCCccccC--CCCcccCCCCCccccccCCCCcccccccCccCCCCCCCCCCCCCCCcccccccccccCCCCCccc
Q 003089 1 MAEETSGGLEATN--GVGLSSMDSTESRWVFQNDDESEIDEDEDEVEDGDSGHRTGGDSEDEDNGEQRLIRTGPRIDSFD 78 (849)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~d~~~ 78 (849)
|+||.+++..++. .+++.+++|.||||||++|||+|++++.+++.++++......+++++++.++|+||++||+||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 80 (852)
T PLN00151 1 MEEESSGGIGSSSNGSGGLVGTDSGESRWVDGSEDDSEDPASLDDDDDDRDSGGGMLEEEEDGNMRRRLIRTPPRVDSFD 80 (852)
T ss_pred CCCcccCCCCCCCCccCCcccCCCCCcccccCccccccCCcccccccccccccCCccccccccchhhhHhhCCCccchhh
Confidence 5666666555443 34478999999999999888887755444443333321222345566788999999999999999
Q ss_pred ccccccCCcccCccccchHHHHHHHHHhccceeecccCcChHHHHHHhhcCCCCCCcCcEehhHHHHHHHHHHHhhhhee
Q 003089 79 VEALEVPGALRNDYEEFSVGRKIILAFQTLGVVFGDVGTSPLYTFDVMFSKAPINDNEDILGALSLVLYTLILIPLVKYV 158 (849)
Q Consensus 79 ~ea~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~F~~~~~~~~~dilGvLSLIfWtLtLiv~iKYv 158 (849)
+|+++++++++|+.++.++|+++.|||||||||||||||||||||+++|++.+++++|||+|+||||||||||||++|||
T Consensus 81 ~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvLSLIfWtLtLiv~iKYV 160 (852)
T PLN00151 81 VEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGALSLVLYTLILIPLAKYV 160 (852)
T ss_pred hcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeehHHHHHHHHHHHHHhhe
Confidence 99999998887777788888999999999999999999999999999997644578999999999999999999999999
Q ss_pred eEEEEecCCCCchHHHHHHHHhhhcccCCCCCCCCcccccccccccCCCchhhhhHHHHHHHhhhHhHHHHHHHHHHhhh
Q 003089 159 FVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGT 238 (849)
Q Consensus 159 ~ivL~Add~GEGGtfALysLi~r~ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~ 238 (849)
+|||||||||||||||||||+|||+|++++||||++|+++|+|+++.|+++.+|+.++|++||+|+++|++|++++++||
T Consensus 161 ~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~Gt 240 (852)
T PLN00151 161 LVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGT 240 (852)
T ss_pred eEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccchhhhhhccccccccCCCCCCeeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHHHHHHHhh
Q 003089 239 SMVIADGVVTPAMSVMSAVGGLKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLS 318 (849)
Q Consensus 239 sm~igDGvlTPAiSVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~ 318 (849)
||+||||||||||||||||||||++.|++++++||||||+||++||++|||||+|||++|||||++||++|+++|+|||+
T Consensus 241 amviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~ 320 (852)
T PLN00151 241 SMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLV 320 (852)
T ss_pred HHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCcCcccccCCCccceecccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccceehhhHhH
Q 003089 319 NMTAVSGGHLIPFTYTTSSRGTQLRPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCLQLTFVFLV 385 (849)
Q Consensus 319 ~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~Iqiaw~~~V 385 (849)
+ |||+ ||+||||+|+++||++ +||||+||+ ||| |||||++|||+||+|+|
T Consensus 321 ~-------------~~p~----Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V 383 (852)
T PLN00151 321 K-------------YDSS----VFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLV 383 (852)
T ss_pred h-------------cCHH----HHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhH
Confidence 9 9999 9999999999999999 999999999 999 99999999999999999
Q ss_pred HHHHHHhhccchhhhccCCCcccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCceeEeecCC
Q 003089 386 LPCLLLGYLGQAAYLMDNHAGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSR 465 (849)
Q Consensus 386 ~P~LlL~Y~GQaA~Ll~~p~~~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~ 465 (849)
||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+|||++||++||||||+||+|||+
T Consensus 384 ~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~ 463 (852)
T PLN00151 384 LPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSR 463 (852)
T ss_pred HHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEechhHHHHHHHHhheeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHH
Q 003089 466 KFMGQIYIPVINWFLLVVCLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLGIELTF 545 (849)
Q Consensus 466 ~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F~~ie~~f 545 (849)
+++||||||+|||+||++|+++|++||||++|||||||||++||++||+|+++||+++||||++++++|+++|+++|++|
T Consensus 464 ~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f 543 (852)
T PLN00151 464 KFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVF 543 (852)
T ss_pred ccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccccceEEEEecCCCCcchhH
Q 003089 546 FSSVLWSVGDGSWIILVFAIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIF 625 (849)
Q Consensus 546 ~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~RvpG~glf~t~~~~gvP~~f 625 (849)
||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++++|+|++|
T Consensus 544 ~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f 623 (852)
T PLN00151 544 FSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIF 623 (852)
T ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCccceeEEEEEEEEeccccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccChhhHHHHHHHHHHHHHHHh
Q 003089 626 GHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRRE 705 (849)
Q Consensus 626 ~h~l~~~~alH~~~Vfv~ik~~~vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~~~Fe~~Li~~L~~FI~~E 705 (849)
.||++|||++||++||||||++|+|+||++|||+++|++||+|++|||++||||||.++++++|||++|+++|++|||+|
T Consensus 624 ~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e 703 (852)
T PLN00151 624 GHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRRE 703 (852)
T ss_pred HHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999987448999999999999999999
Q ss_pred hhhccccCCCCCCCCCCCccccccccccCCCccccCCCcccccccccCCCCCCCCCCCc---c-CCC-CCCcchhhHHHH
Q 003089 706 AQERSLESDGDDDIDSEDDLSCSRVLIAPNGSVYSLGAPLLAEYKEKNEPISQPSTSEE---V-KPE-LPADSEQSLERE 780 (849)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~l~~~~~~~~~~~~~~~~~~~---~-~~~-~s~~~~~~veeE 780 (849)
+.+...+++.+++..++.+...+.....++.+..+...+.+++....+........+.+ . ..+ ...+.++++++|
T Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 783 (852)
T PLN00151 704 AQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYE 783 (852)
T ss_pred hhhccccccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccccccCccHHHH
Confidence 86432222111100000000000000011111111111111111111000000000000 0 000 112335689999
Q ss_pred HHHHHHHHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeEeeeEEEC
Q 003089 781 LSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYMV 849 (849)
Q Consensus 781 l~~L~~A~eaGVvYILG~~~VkAr~~SsflKKivIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 849 (849)
+++|++|+|+||+||+||++||||++|+|+||++|||+|+|||||||++.++|+|||++||||||+|||
T Consensus 784 l~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 784 LSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=3.1e-249 Score=2116.64 Aligned_cols=755 Identities=43% Similarity=0.776 Sum_probs=687.3
Q ss_pred cccccccccCCCCCc-ccccccccCCcccCccccchHHHHHHHHHhccceeecccCcChHHHHHHhhcCCCCCCcCcEeh
Q 003089 62 NGEQRLIRTGPRIDS-FDVEALEVPGALRNDYEEFSVGRKIILAFQTLGVVFGDVGTSPLYTFDVMFSKAPINDNEDILG 140 (849)
Q Consensus 62 ~~~~~~~~~~~r~d~-~~~ea~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~F~~~~~~~~~dilG 140 (849)
.+|+|+||++||+|+ ||+||++++++++ .++.+|+.++.|||||||||||||||||||||+++|++++.+++|||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~ilG 86 (779)
T PLN00150 9 SNQGRLWDLDQRITRPLGVDADSVRSMYF--SSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDIIG 86 (779)
T ss_pred CCccchhhCCCCCCCccCcchhhcccccc--cccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhHh
Confidence 458999999999999 9999999999865 5689999999999999999999999999999999997644689999999
Q ss_pred hHHHHHHHHHHHhhhheeeEEEEecCCCCchHHHHHHHHhhhcccCCCCCCCCcccccccccccCCCchhhhhHHHHHHH
Q 003089 141 ALSLVLYTLILIPLVKYVFVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERL 220 (849)
Q Consensus 141 vLSLIfWtLtLiv~iKYv~ivL~Add~GEGGtfALysLi~r~ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~l 220 (849)
+||||||||||||++|||+|||||||||||||||||||+|||+|++++|||++.|+++++|+++ +..|..++|++|
T Consensus 87 vLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~----~~~r~~~~k~~l 162 (779)
T PLN00150 87 ALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD----NMNRKTRIQRKL 162 (779)
T ss_pred HHHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc----cchhhhHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999863 334556799999
Q ss_pred hhhHhHHHHHHHHHHhhhhhhccccccccchhhhhhccccccccCCCCCCeeehhHHHHHHHHhhhccccccccccchhh
Q 003089 221 ETSLTLKRLLLMLVLAGTSMVIADGVVTPAMSVMSAVGGLKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGP 300 (849)
Q Consensus 221 e~s~~~~~~ll~l~llG~sm~igDGvlTPAiSVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgP 300 (849)
|+|+.+|++++++|++|+||+||||||||||||||||||||+..|++++++||||||+||++||++||+||+|||++|||
T Consensus 163 E~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgP 242 (779)
T PLN00150 163 ENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAP 242 (779)
T ss_pred hcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCcCcccccCCCccceecccChhhHHHHHHH-------HhhHHHHHH----HHh-
Q 003089 301 AYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPGMPLGAVFFVQQ-------VLRQCLQIF----VIF- 368 (849)
Q Consensus 301 Iml~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP~ya~~ff~~-------~LGgVvL~i----ALf- 368 (849)
||++||++||++|+|||++ |||+ ||+|+||+|+++||++ +||||+||+ |||
T Consensus 243 Im~~Wf~~i~~iGiyni~~-------------~~p~----Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyA 305 (779)
T PLN00150 243 IFLCWFFSLALIGCYNIIK-------------WDKS----VFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFA 305 (779)
T ss_pred HHHHHHHHHHHHHHHHHHh-------------cCHH----HHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhc
Confidence 9999999999999999999 9999 9999999999999999 999999999 999
Q ss_pred -ccCCCCccceehhhHhHHHHHHHhhccchhhhccCCCcccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHH
Q 003089 369 -QCGRFSGCLQLTFVFLVLPCLLLGYLGQAAYLMDNHAGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIK 447 (849)
Q Consensus 369 -lGHF~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~p~~~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~ 447 (849)
|||||++|||+||+++|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++
T Consensus 306 DlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~ 385 (779)
T PLN00150 306 DLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVK 385 (779)
T ss_pred cccCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCceeEeecCCccCCceEechhHHHHHHHHhheeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchh
Q 003089 448 QSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQIN 527 (849)
Q Consensus 448 Qai~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~ 527 (849)
||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||
T Consensus 386 Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~ 465 (779)
T PLN00150 386 QAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKH 465 (779)
T ss_pred HHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccc
Q 003089 528 IVIVLSFVVVFLGIELTFFSSVLWSVGDGSWIILVFAIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRA 607 (849)
Q Consensus 528 ~~~~~~f~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~Rv 607 (849)
++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||
T Consensus 466 ~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~Rv 545 (779)
T PLN00150 466 ILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRV 545 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred cceEEEEecCCCCcchhHHHhhhhcCccceeEEEEEEEEeccccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccCh
Q 003089 608 PGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENH 687 (849)
Q Consensus 608 pG~glf~t~~~~gvP~~f~h~l~~~~alH~~~Vfv~ik~~~vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~ 687 (849)
||+|+|||++++|+|++|.||++|||++||++||+|||++|+|+||++|||+++|+++++||+|||++||||||..++ +
T Consensus 546 pG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d-~ 624 (779)
T PLN00150 546 PGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKK-D 624 (779)
T ss_pred CcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999886 8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCccccccccccCCCc--cccCCCcccccccccCCCCCCCCCCCcc
Q 003089 688 QTFEQLLIESLEKFIRREAQERSLESDGDDDIDSEDDLSCSRVLIAPNGS--VYSLGAPLLAEYKEKNEPISQPSTSEEV 765 (849)
Q Consensus 688 ~~Fe~~Li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~s~~~~l~~~~~~~~~~~~~~~~~~~~ 765 (849)
+|||++|+++|++|||+|+.+...+++... .+++..+...+ ++++ ..+.+.+..........+...+ .+.
T Consensus 625 ~dFE~~LvesL~~FIr~e~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 696 (779)
T PLN00150 625 DNFEQLLIASLERFIEIESFREQSDLESMA-ASWTPEELMGE----GNSVGSGLFTQYDQSDINFATSQEWKRP---SSQ 696 (779)
T ss_pred hHHHHHHHHHHHHHHHhhhhcccccccccc-ccccccccccc----CCcccccccccccccccccccccccccc---ccc
Confidence 999999999999999999853222211111 11100000000 0000 0000000000000000000000 000
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeEeee
Q 003089 766 KPELPADSEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGM 845 (849)
Q Consensus 766 ~~~~s~~~~~~veeEl~~L~~A~eaGVvYILG~~~VkAr~~SsflKKivIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm 845 (849)
..+. .+.+++++||+++|++|+|+||+||+||++||||++|+|+||++|||+|+|||||||+|.++|+|||++|+||||
T Consensus 697 ~~~~-~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm 775 (779)
T PLN00150 697 EDSV-SGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGM 775 (779)
T ss_pred cccc-ccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEece
Confidence 0111 223468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEC
Q 003089 846 TYMV 849 (849)
Q Consensus 846 ~Y~v 849 (849)
+|||
T Consensus 776 vY~V 779 (779)
T PLN00150 776 VYYV 779 (779)
T ss_pred EEEC
Confidence 9997
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=1e-245 Score=2088.63 Aligned_cols=745 Identities=40% Similarity=0.735 Sum_probs=668.3
Q ss_pred ccccccccCCcccCccccchHHH---HHHHHHhccceeecccCcChHHHHHHhhcCC--CCCCcCcEehhHHHHHHHHHH
Q 003089 77 FDVEALEVPGALRNDYEEFSVGR---KIILAFQTLGVVFGDVGTSPLYTFDVMFSKA--PINDNEDILGALSLVLYTLIL 151 (849)
Q Consensus 77 ~~~ea~~~~~~~~~~~~~~~~~~---~l~La~qslGVVyGDIGTSPLYv~~~~F~~~--~~~~~~dilGvLSLIfWtLtL 151 (849)
||+|++--+.+.+ +..+|+. ++.|||||||||||||||||||||+++|++. ..+++|||+|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~---~~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtL 77 (785)
T PLN00148 1 MEAESGVSPSRNP---SQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTL 77 (785)
T ss_pred CCcccCCCCCCCC---CcchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHH
Confidence 5777776544333 4456766 8999999999999999999999999999652 237899999999999999999
Q ss_pred HhhhheeeEEEEecCCCCchHHHHHHHHhhhcccCCCCCCCCcccccccccccCCCchhhhhHHHHHHHhhhHhHHHHHH
Q 003089 152 IPLVKYVFVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLL 231 (849)
Q Consensus 152 iv~iKYv~ivL~Add~GEGGtfALysLi~r~ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll 231 (849)
||++|||+|||||||||||||||||||+|||+|++++||||++|+++++|+++.++.+ +++.++|++||+|+++|.+++
T Consensus 78 iv~iKYV~ivlrAdn~GEGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll 156 (785)
T PLN00148 78 IPLLKYVTILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALL 156 (785)
T ss_pred HHHHhheEEEEEecCCCCchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988665544 556779999999999999999
Q ss_pred HHHHhhhhhhccccccccchhhhhhccccccccCCCCCCeeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHH
Q 003089 232 MLVLAGTSMVIADGVVTPAMSVMSAVGGLKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLA 311 (849)
Q Consensus 232 ~l~llG~sm~igDGvlTPAiSVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~ 311 (849)
++|++|+||+||||+|||||||||||||||++.|++++++||||||+||++||++|||||+|||++|||||++||++||+
T Consensus 157 ~l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~ 236 (785)
T PLN00148 157 LVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGS 236 (785)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccCCCcCcccccCCCccceecccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccce
Q 003089 312 LEFTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCLQ 378 (849)
Q Consensus 312 iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~Iq 378 (849)
+|+|||++ |||+ ||+||||+|+++||++ +||||+||+ ||| |||||++|||
T Consensus 237 iGiyni~~-------------~~p~----Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Ir 299 (785)
T PLN00148 237 IGLYNIIH-------------WNPK----IIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIR 299 (785)
T ss_pred HHHHHHHh-------------cCHH----HhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceE
Confidence 99999999 9999 9999999999999999 999999999 999 9999999999
Q ss_pred ehhhHhHHHHHHHhhccchhhhccCCCcccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCce
Q 003089 379 LTFVFLVLPCLLLGYLGQAAYLMDNHAGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRL 458 (849)
Q Consensus 379 iaw~~~V~P~LlL~Y~GQaA~Ll~~p~~~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrv 458 (849)
+||+++|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+
T Consensus 300 iaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrv 379 (785)
T PLN00148 300 LAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRV 379 (785)
T ss_pred EeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCccCCceEechhHHHHHHHHhheeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHH
Q 003089 459 KIIHTSRKFMGQIYIPVINWFLLVVCLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVF 538 (849)
Q Consensus 459 kIvHTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F 538 (849)
||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|
T Consensus 380 kIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F 459 (785)
T PLN00148 380 KVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFF 459 (785)
T ss_pred eEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccccceEEEEecCC
Q 003089 539 LGIELTFFSSVLWSVGDGSWIILVFAIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELV 618 (849)
Q Consensus 539 ~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~RvpG~glf~t~~~ 618 (849)
+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++.
T Consensus 460 ~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~ 539 (785)
T PLN00148 460 GFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELA 539 (785)
T ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred CCcchhHHHhhhhcCccceeEEEEEEEEeccccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccChhhHHHHHHHHH
Q 003089 619 KGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESL 698 (849)
Q Consensus 619 ~gvP~~f~h~l~~~~alH~~~Vfv~ik~~~vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~~~Fe~~Li~~L 698 (849)
+|+|++|.||++|||++||++||||||++|+|+||++|||+++|+++++||+|||++||||||.+++ ++|||++|+++|
T Consensus 540 ~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~-~~dFe~~Lv~~L 618 (785)
T PLN00148 540 TGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRD-DGDFENMLVQSI 618 (785)
T ss_pred CCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCccccc-chHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999876 899999999999
Q ss_pred HHHHHHhhhhcccc-CCCCCCCCCCCccccccc-----cc---cCC---------CccccCCCcccccccccCCCCCCCC
Q 003089 699 EKFIRREAQERSLE-SDGDDDIDSEDDLSCSRV-----LI---APN---------GSVYSLGAPLLAEYKEKNEPISQPS 760 (849)
Q Consensus 699 ~~FI~~E~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~---~~~---------~s~~s~~~~l~~~~~~~~~~~~~~~ 760 (849)
++|||+|+.+.+.+ ++.++ . +++.+..+.. .. .++ ++..+...+.+++ .. +..++.
T Consensus 619 ~~FIr~e~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~ 692 (785)
T PLN00148 619 AEFIQMEAEEPQSSASESSS-N-DGRMAVISTRDVQSSSLLMVSEQELADIDDSIQSSKSLTLQSLQS---AY-EDENPG 692 (785)
T ss_pred HHHHHhhhhccccccccccc-c-ccccccccccccccccccccccccccccccccccccccccccccc---cc-cccccc
Confidence 99999998532111 00010 0 0001110000 00 000 0000000000000 00 000000
Q ss_pred CCCccCCCC----CCcchhhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccC
Q 003089 761 TSEEVKPEL----PADSEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGIANLSVP 836 (849)
Q Consensus 761 ~~~~~~~~~----s~~~~~~veeEl~~L~~A~eaGVvYILG~~~VkAr~~SsflKKivIN~~Y~FLRkNcR~~~~~L~IP 836 (849)
....++.+. +.+.+++++||+++|++|+|+||+||+||++||||++|+|+||++|||+|+|||||||+|.++|+||
T Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IP 772 (785)
T PLN00148 693 QSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIP 772 (785)
T ss_pred cccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCC
Confidence 000000111 1223568999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEeeeEEEC
Q 003089 837 HSNLMQVGMTYMV 849 (849)
Q Consensus 837 h~~LleVGm~Y~v 849 (849)
|++||||||+|||
T Consensus 773 h~~LleVGM~Y~V 785 (785)
T PLN00148 773 HISLIEVGMIYYV 785 (785)
T ss_pred hHHeEEcceEEEC
Confidence 9999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.7e-244 Score=2080.37 Aligned_cols=748 Identities=40% Similarity=0.704 Sum_probs=664.1
Q ss_pred ccccccccCCcccCccccchHHHHHHHHHhccceeecccCcChHHHHHHhhcCC--CCCCcCcEehhHHHHHHHHHHHhh
Q 003089 77 FDVEALEVPGALRNDYEEFSVGRKIILAFQTLGVVFGDVGTSPLYTFDVMFSKA--PINDNEDILGALSLVLYTLILIPL 154 (849)
Q Consensus 77 ~~~ea~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~F~~~--~~~~~~dilGvLSLIfWtLtLiv~ 154 (849)
||.|++.. .||.++.+|+.++.|||||||||||||||||||||+++|.+. ..++++||+|+||||||||||||+
T Consensus 1 ~~~~~~~~----~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~ 76 (779)
T PLN00149 1 MDLEGGSP----QNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPL 76 (779)
T ss_pred CCcccCcc----ccccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHh
Confidence 46666653 234566899999999999999999999999999999999652 237899999999999999999999
Q ss_pred hheeeEEEEecCCCCchHHHHHHHHhhhcccCCCCCCCCcccccccccccCCCc---hhhhhHHHHHHHhhhHhHHHHHH
Q 003089 155 VKYVFVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSP---ELERSLKIKERLETSLTLKRLLL 231 (849)
Q Consensus 155 iKYv~ivL~Add~GEGGtfALysLi~r~ak~~~~pn~~~~d~~~s~~~~~~~~~---~~~~~~~~k~~le~s~~~~~~ll 231 (849)
+|||+|||||||||||||||||||+|||+|++++||||++|+++++|+++.|+. +.+++.++|++||+|+.+|++++
T Consensus 77 iKYv~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll 156 (779)
T PLN00149 77 LKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLL 156 (779)
T ss_pred hhhEEEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999877644 33446789999999999999999
Q ss_pred HHHHhhhhhhccccccccchhhhhhccccccccCCCCCCee-ehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHH
Q 003089 232 MLVLAGTSMVIADGVVTPAMSVMSAVGGLKVGVGAINQDQV-VMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLL 310 (849)
Q Consensus 232 ~l~llG~sm~igDGvlTPAiSVLSAVeGL~v~~p~l~~~~V-v~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~ 310 (849)
++|++|+||+||||||||||||||||||||++.|...++++ |||||+||++||++||+||+|||++|||||++||++||
T Consensus 157 ~l~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~ 236 (779)
T PLN00149 157 VLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCIS 236 (779)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999976545455 99999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccCCCcCcccccCCCccceecccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccc
Q 003089 311 ALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCL 377 (849)
Q Consensus 311 ~iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~I 377 (849)
++|+|||++ |||+ ||+||||+|+++||++ +||||+||+ ||| |||||++||
T Consensus 237 ~iGiyni~~-------------~~p~----Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~I 299 (779)
T PLN00149 237 AIGVYNIFH-------------WNPH----VYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSI 299 (779)
T ss_pred HHHHHHHHh-------------cCHh----HhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccce
Confidence 999999999 9999 9999999999999998 999999999 999 999999999
Q ss_pred eehhhHhHHHHHHHhhccchhhhccCCC---cccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCC
Q 003089 378 QLTFVFLVLPCLLLGYLGQAAYLMDNHA---GAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGC 454 (849)
Q Consensus 378 qiaw~~~V~P~LlL~Y~GQaA~Ll~~p~---~~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~ 454 (849)
|+||+++|||||+|||+||||||++||+ +++||||+++|+|++||+|++||+||||||||||||+|||++||++|||
T Consensus 300 r~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~ 379 (779)
T PLN00149 300 KIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGC 379 (779)
T ss_pred eeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999996 5667999999999999999999999999999999999999999999999
Q ss_pred CCceeEeecCCccCCceEechhHHHHHHHHhheeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHH
Q 003089 455 FPRLKIIHTSRKFMGQIYIPVINWFLLVVCLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSF 534 (849)
Q Consensus 455 fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f 534 (849)
|||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+++|+||++++++|
T Consensus 380 fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f 459 (779)
T PLN00149 380 FPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICF 459 (779)
T ss_pred CCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccccceEEEE
Q 003089 535 VVVFLGIELTFFSSVLWSVGDGSWIILVFAIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLY 614 (849)
Q Consensus 535 ~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~RvpG~glf~ 614 (849)
+++|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+||
T Consensus 460 ~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~ 539 (779)
T PLN00149 460 IFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIH 539 (779)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred ecCCCCcchhHHHhhhhcCccceeEEEEEEEEeccccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccChhhHHHHH
Q 003089 615 NELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLL 694 (849)
Q Consensus 615 t~~~~gvP~~f~h~l~~~~alH~~~Vfv~ik~~~vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~~~Fe~~L 694 (849)
|++.+|+|++|.||++|||++||++||||||++|+|+||++|||+++|+++++||+|||++||||||.+++ ++|||++|
T Consensus 540 t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d-~~dFE~~L 618 (779)
T PLN00149 540 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKD-DMEFEKDL 618 (779)
T ss_pred cCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeecccccc-chHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999886 89999999
Q ss_pred HHHHHHHHHHhhhhccccCCCCCCCCCCCccccccccccCCC-----ccccCCCcccccccccCCCCCCCCCCCccCCC-
Q 003089 695 IESLEKFIRREAQERSLESDGDDDIDSEDDLSCSRVLIAPNG-----SVYSLGAPLLAEYKEKNEPISQPSTSEEVKPE- 768 (849)
Q Consensus 695 i~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----s~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 768 (849)
+++|++|||+|+.+...+++...+. ++.++..+......++ +......+. ......... +...+...++.+
T Consensus 619 ve~L~~FI~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ 695 (779)
T PLN00149 619 VCSIAEFIRSEKPEPNGAPENEEGE-DERMTVVGTCSTHLEGIQLREDDSDKQEPA-GTSELREIR-SPPVSRPKKRVRF 695 (779)
T ss_pred HHHHHHHHHhhhhcccccccccccc-cccccccccccccccccccccccccccccc-ccccccccc-CccccCcccceee
Confidence 9999999999975321111110000 0111111000000000 000000000 000000000 000000000011
Q ss_pred ---CCCcchhhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeEeee
Q 003089 769 ---LPADSEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGM 845 (849)
Q Consensus 769 ---~s~~~~~~veeEl~~L~~A~eaGVvYILG~~~VkAr~~SsflKKivIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm 845 (849)
.+.+.+++++||+++|++|||+||+||+||++||||++|+|+||++|||+|+|||||||+|.++|+|||++||||||
T Consensus 696 ~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGm 775 (779)
T PLN00149 696 VVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGM 775 (779)
T ss_pred ccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEece
Confidence 12234578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEC
Q 003089 846 TYMV 849 (849)
Q Consensus 846 ~Y~v 849 (849)
+|||
T Consensus 776 vY~v 779 (779)
T PLN00149 776 VYHV 779 (779)
T ss_pred EEEC
Confidence 9997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=1.2e-219 Score=1863.37 Aligned_cols=674 Identities=38% Similarity=0.675 Sum_probs=640.5
Q ss_pred HHHhccceeecccCcChHHHHHHhhcCCCCCCcCcEehhHHHHHHHHHHHhhhheeeEEEEecCCCCchHHHHHHHHhhh
Q 003089 103 LAFQTLGVVFGDVGTSPLYTFDVMFSKAPINDNEDILGALSLVLYTLILIPLVKYVFVVLWANDDGEGGTFALYSLICRH 182 (849)
Q Consensus 103 La~qslGVVyGDIGTSPLYv~~~~F~~~~~~~~~dilGvLSLIfWtLtLiv~iKYv~ivL~Add~GEGGtfALysLi~r~ 182 (849)
|||||||||||||||||||||+++|.+ +.+++|||+|+|||||||||||+++|||++||||||||||||||||||+||+
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~-~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~ 79 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSG-GFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRY 79 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHh
Confidence 689999999999999999999999976 3578999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccccCCCchhhhhHHHHHHHhhhHhHHHHHHHHHHhhhhhhccccccccchhhhhhcccccc
Q 003089 183 AKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGTSMVIADGVVTPAMSVMSAVGGLKV 262 (849)
Q Consensus 183 ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~sm~igDGvlTPAiSVLSAVeGL~v 262 (849)
+|++.+||||+.|+++++|+.+.+.. .+|..++|+++|++++.|++++++|++|+||+||||+||||||||||||||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v 158 (688)
T TIGR00794 80 AKISARPVHQELDRAESSYSTKSPNL-LNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEI 158 (688)
T ss_pred ccccCCCcccchhhhhhhcccccccc-cchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccc
Confidence 99999999999999999999988876 56678899999999888999999999999999999999999999999999999
Q ss_pred ccCCCCCCeeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhcccccCCCcCcccccCCCcccee
Q 003089 263 GVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQL 342 (849)
Q Consensus 263 ~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl 342 (849)
+.|++++++||||||+||++||++||+||+|||++|||||++||++||++|+|||++ |||+ ||
T Consensus 159 ~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~-------------~~P~----Vl 221 (688)
T TIGR00794 159 VAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVK-------------FNPE----VL 221 (688)
T ss_pred cCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHh-------------cCHH----HH
Confidence 999998899999999999999999999999999999999999999999999999999 9999 99
Q ss_pred cccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccceehhhHhHHHHHHHhhccchhhhccCCCcccC
Q 003089 343 RPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCLQLTFVFLVLPCLLLGYLGQAAYLMDNHAGAEQ 409 (849)
Q Consensus 343 ~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~p~~~~n 409 (849)
+|+||+|+++||.+ +||+|+||+ ||| ||||||+|||+||+++|||||+|||+||||||++||++.+|
T Consensus 222 ~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~N 301 (688)
T TIGR00794 222 KALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKN 301 (688)
T ss_pred hHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcC
Confidence 99999999999999 999999999 999 99999999999999999999999999999999999999999
Q ss_pred ccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCceeEeecCCccCCceEechhHHHHHHHHhheee
Q 003089 410 SFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCLVFVC 489 (849)
Q Consensus 410 pFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~l~v~~ 489 (849)
|||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|+
T Consensus 302 pFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl 381 (688)
T TIGR00794 302 PFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTA 381 (688)
T ss_pred cHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHHHHHH
Q 003089 490 SISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLGIELTFFSSVLWSVGDGSWIILVFAIIMFF 569 (849)
Q Consensus 490 ~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~ 569 (849)
+||||++||||||+||++||+|||+|+++||+.+|+||++++++|+++|+.+|++|||||+.||+||||+||++|+++++
T Consensus 382 ~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~ 461 (688)
T TIGR00794 382 GFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMS 461 (688)
T ss_pred EecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHHHh-ccCCCCccccceEEEEecCCCCcchhHHHhhhhcCccceeEEEEEEEEec
Q 003089 570 IMFVWNYGSKLKYETEVKQKLSMDLMREL-GCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVP 648 (849)
Q Consensus 570 iM~~W~~G~~~~~~~~~~~~~s~~~~~~l-~~~~~~~RvpG~glf~t~~~~gvP~~f~h~l~~~~alH~~~Vfv~ik~~~ 648 (849)
+|++|+||++++++++.++++|++++++. .++.+.+|+||+|+|||++++++|++|.||++|||++||++||+|||++|
T Consensus 462 iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~ 541 (688)
T TIGR00794 462 VMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLD 541 (688)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECC
Confidence 99999999999999999999999999884 44455589999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccChhhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCccccc
Q 003089 649 VPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDIDSEDDLSCS 728 (849)
Q Consensus 649 vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~~~Fe~~Li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~ 728 (849)
+|+||++||+.++++++++ ++|||++||||||++++ +++||++++++|++||+++..+. .. +++ +.
T Consensus 542 ~P~Vp~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~-~~~l~~~ii~~L~~fi~~~~~~~-~~--~~~-----~~---- 607 (688)
T TIGR00794 542 APTVHNEERVQISQVGPTE-GMYRCVIRYGFMDTPNE-PKELAAHIVNSIVEFVEHECGFN-LN--NLE-----EL---- 607 (688)
T ss_pred CCcCCcceEEEEEEEcCCC-CEEEEEEEecCCcCCCc-HHHHHHHHHHHHHHHHHHHhhhc-cc--ccc-----cc----
Confidence 9999999999999999754 89999999999999999 89999999999999999876310 00 000 00
Q ss_pred cccccCCCccccCCCcccccccccCCCCCCCCCCCccCCCCCCcchhhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCc
Q 003089 729 RVLIAPNGSVYSLGAPLLAEYKEKNEPISQPSTSEEVKPELPADSEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSW 808 (849)
Q Consensus 729 ~~~~~~~~s~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~veeEl~~L~~A~eaGVvYILG~~~VkAr~~Ss 808 (849)
.. ++ .+...+||++++++++|+|++|++||++++++++|+
T Consensus 608 ----~~-------------------~~-----------------~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~ 647 (688)
T TIGR00794 608 ----SD-------------------KR-----------------CRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSP 647 (688)
T ss_pred ----cc-------------------cc-----------------cccchHHHHHHHHHHhhcCCEEEeeceEEEECCCcc
Confidence 00 00 001257899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhccCCCcccccCCCCeeEeeeEEEC
Q 003089 809 FIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYMV 849 (849)
Q Consensus 809 flKKivIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 849 (849)
++||+.||++|.|||||||++...++|||+|++||||.||+
T Consensus 648 ~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 648 ILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred HHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 99999999999999999999999999999999999999986
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=5.7e-195 Score=1639.52 Aligned_cols=594 Identities=29% Similarity=0.521 Sum_probs=559.8
Q ss_pred HHHHhccceeecccCcChHHHHHHhhcC-CCC-CCcCcEehhHHHHHHHHHHHhhhheeeEEEEecCCCCchHHHHHHHH
Q 003089 102 ILAFQTLGVVFGDVGTSPLYTFDVMFSK-API-NDNEDILGALSLVLYTLILIPLVKYVFVVLWANDDGEGGTFALYSLI 179 (849)
Q Consensus 102 ~La~qslGVVyGDIGTSPLYv~~~~F~~-~~~-~~~~dilGvLSLIfWtLtLiv~iKYv~ivL~Add~GEGGtfALysLi 179 (849)
.|+++|||||||||||||||||+++|.+ ++. +++|||+|+||||||||||++++|||++||||||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 3889999999999999999999999966 333 68999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCcccccccccccCCCchhhhhHHHHHHHhhhHhHHHHHHHHHHhhhhhhccccccccchhhhhhccc
Q 003089 180 CRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGTSMVIADGVVTPAMSVMSAVGG 259 (849)
Q Consensus 180 ~r~ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~sm~igDGvlTPAiSVLSAVeG 259 (849)
+|+.+ ++.|.+++++|++|+||++|||+|||||||||||||
T Consensus 91 ~~~~~---------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEG 131 (622)
T PRK10745 91 GRNTS---------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEG 131 (622)
T ss_pred hhhcc---------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhc
Confidence 87543 033457899999999999999999999999999999
Q ss_pred cccccCCCCCCeeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhcccccCCCcCcccccCCCcc
Q 003089 260 LKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRG 339 (849)
Q Consensus 260 L~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~~~~ 339 (849)
||+..|++ +++||||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+
T Consensus 132 L~v~~p~l-~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~--------------~P~--- 193 (622)
T PRK10745 132 LEIVAPQL-DTYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA--------------NPE--- 193 (622)
T ss_pred ccccCCCC-CCccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc--------------CHH---
Confidence 99999999 669999999999999999999999999999999999999999999999999 899
Q ss_pred ceecccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccceehhhHhHHHHHHHhhccchhhhccCCCc
Q 003089 340 TQLRPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCLQLTFVFLVLPCLLLGYLGQAAYLMDNHAG 406 (849)
Q Consensus 340 ~Vl~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~p~~ 406 (849)
||+|+||+|+++||.+ +||+|+||+ ||| ||||||+|||+||+++|||||+|||+||||||++||++
T Consensus 194 -Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~ 272 (622)
T PRK10745 194 -VLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEA 272 (622)
T ss_pred -HHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchh
Confidence 9999999999999998 999999999 999 99999999999999999999999999999999999999
Q ss_pred ccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCceeEeecCCccCCceEechhHHHHHHHHhh
Q 003089 407 AEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCLV 486 (849)
Q Consensus 407 ~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~l~ 486 (849)
.+||||.++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++
T Consensus 273 ~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~ 352 (622)
T PRK10745 273 IKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVI 352 (622)
T ss_pred hcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHHH
Q 003089 487 FVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLGIELTFFSSVLWSVGDGSWIILVFAII 566 (849)
Q Consensus 487 v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i 566 (849)
++++||+|++||+|||+||++||+|||+|+++|++.+|+|+++++++|+++|+.+|++||+||+.||+||||+|+++|++
T Consensus 353 ~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v 432 (622)
T PRK10745 353 VIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLV 432 (622)
T ss_pred eEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccccceEEEEecCCCCcchhHHHhhhhcCccceeEEEEEEEE
Q 003089 567 MFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKY 646 (849)
Q Consensus 567 ~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~RvpG~glf~t~~~~gvP~~f~h~l~~~~alH~~~Vfv~ik~ 646 (849)
++++|++|++||+++++++.++++|++++++..++.++.||||+|+|||+..+++|+++.||+||||++||++||+|||+
T Consensus 433 ~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~ 512 (622)
T PRK10745 433 MFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRT 512 (622)
T ss_pred HHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEE
Confidence 99999999999999999999999999999998887788899999999999999999999999999999999999999999
Q ss_pred eccccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccChhhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCccc
Q 003089 647 VPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDIDSEDDLS 726 (849)
Q Consensus 647 ~~vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~~~Fe~~Li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~ 726 (849)
+|+|+||++||++++++++ ++|||++||||||+||. ++.+++. +.+. . +
T Consensus 513 ~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i-~~~L~~~---------~~~g----~-----~--------- 561 (622)
T PRK10745 513 EDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNV-EEVFHRC---------GLEG----L-----S--------- 561 (622)
T ss_pred CCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCH-HHHHHHH---------HhCC----C-----C---------
Confidence 9999999999999999997 79999999999999988 4333210 0000 0 0
Q ss_pred cccccccCCCccccCCCcccccccccCCCCCCCCCCCccCCCCCCcchhhHHHHHHHHHHHHhcCcEEEeeecEEEecCC
Q 003089 727 CSRVLIAPNGSVYSLGAPLLAEYKEKNEPISQPSTSEEVKPELPADSEQSLERELSFIRKAKESGVVYLLGHGDIRARKD 806 (849)
Q Consensus 727 ~~~~~~~~~~s~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~veeEl~~L~~A~eaGVvYILG~~~VkAr~~ 806 (849)
. + -..++|.+||+.++..++
T Consensus 562 -------~-------------------------------------~----------------~~~~s~fl~r~~l~~~~~ 581 (622)
T PRK10745 562 -------C-------------------------------------R----------------MMETSFFMSHESLILGKR 581 (622)
T ss_pred -------C-------------------------------------C----------------ccceEEEEeeEEEEeCCC
Confidence 0 0 026799999999998888
Q ss_pred Cc---hHHHHHHHHHHHHHHhhccCCCcccccCCCCeeEeeeEEEC
Q 003089 807 SW---FIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYMV 849 (849)
Q Consensus 807 Ss---flKKivIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~v 849 (849)
++ |-|| +|.||.||+++....+++|++|++|+|+.+++
T Consensus 582 ~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 582 PWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred CCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 77 6555 79999999999999999999999999999885
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=6.8e-187 Score=1561.82 Aligned_cols=520 Identities=40% Similarity=0.690 Sum_probs=505.8
Q ss_pred HHhccceeecccCcChHHHHHHhhcC-CCCCCcCcEehhHHHHHHHHHHHhhhheeeEEEEecCCCCchHHHHHHHHhhh
Q 003089 104 AFQTLGVVFGDVGTSPLYTFDVMFSK-APINDNEDILGALSLVLYTLILIPLVKYVFVVLWANDDGEGGTFALYSLICRH 182 (849)
Q Consensus 104 a~qslGVVyGDIGTSPLYv~~~~F~~-~~~~~~~dilGvLSLIfWtLtLiv~iKYv~ivL~Add~GEGGtfALysLi~r~ 182 (849)
|+||||||||||||||||||+++|.+ ...+++|||+|+||||||||||++++|||++||||||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 68999999999999999999999933 23489999999999999999999999999999999999999999999999853
Q ss_pred cccCCCCCCCCcccccccccccCCCchhhhhHHHHHHHhhhHhHHHHHHHHHHhhhhhhccccccccchhhhhhcccccc
Q 003089 183 AKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGTSMVIADGVVTPAMSVMSAVGGLKV 262 (849)
Q Consensus 183 ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~sm~igDGvlTPAiSVLSAVeGL~v 262 (849)
.+ ++++.|..++++|++|+||++|||+||||||||||||||++
T Consensus 81 ~~-------------------------------------~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v 123 (534)
T PF02705_consen 81 LK-------------------------------------SSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEV 123 (534)
T ss_pred hc-------------------------------------cchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhc
Confidence 33 23456667899999999999999999999999999999999
Q ss_pred ccCCCCCCeeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhcccccCCCcCcccccCCCcccee
Q 003089 263 GVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQL 342 (849)
Q Consensus 263 ~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl 342 (849)
..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ +|+ ||
T Consensus 124 ~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~--------------~p~----Vl 184 (534)
T PF02705_consen 124 ATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ--------------HPE----VL 184 (534)
T ss_pred cCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh--------------CHH----HH
Confidence 999995 89999999999999999999999999999999999999999999999999 599 99
Q ss_pred cccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccceehhhHhHHHHHHHhhccchhhhccCCCcccC
Q 003089 343 RPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCLQLTFVFLVLPCLLLGYLGQAAYLMDNHAGAEQ 409 (849)
Q Consensus 343 ~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~p~~~~n 409 (849)
+|+||+|+++||.+ +||+|+||+ ||| ||||||+|||+||+++|||||+|||+||||||++||++.+|
T Consensus 185 ~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~n 264 (534)
T PF02705_consen 185 KALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSN 264 (534)
T ss_pred HHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhh
Confidence 99999999999999 999999999 999 99999999999999999999999999999999999999999
Q ss_pred ccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCceeEeecCCccCCceEechhHHHHHHHHhheee
Q 003089 410 SFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCLVFVC 489 (849)
Q Consensus 410 pFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~l~v~~ 489 (849)
|||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++++
T Consensus 265 pFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl 344 (534)
T PF02705_consen 265 PFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVL 344 (534)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHHHHHH
Q 003089 490 SISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLGIELTFFSSVLWSVGDGSWIILVFAIIMFF 569 (849)
Q Consensus 490 ~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~ 569 (849)
+||||++||+|||+||++||++||+|+++||+.+||||++++++|+++|+.+|++||+||+.||+||||+||++|+++++
T Consensus 345 ~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~ 424 (534)
T PF02705_consen 345 GFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFT 424 (534)
T ss_pred EECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccccceEEEEecCCCCcchhHHHhhhhcCccceeEEEEEEEEecc
Q 003089 570 IMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPV 649 (849)
Q Consensus 570 iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~RvpG~glf~t~~~~gvP~~f~h~l~~~~alH~~~Vfv~ik~~~v 649 (849)
+|++|+|||+++++++++++++++++.++.++.++.|+||+|+|||+..+++|+++.||++||+++||++||+|+|++|+
T Consensus 425 iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~v 504 (534)
T PF02705_consen 425 IMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPV 504 (534)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEEEEEecCCCCcEEEEEEEeeecc
Q 003089 650 PVVPQSERFLFRRVCPKSYHIFRCIARYGYKD 681 (849)
Q Consensus 650 P~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d 681 (849)
|+||++||++++++++ +++|||++||||||
T Consensus 505 P~V~~~~R~~v~~l~~--~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 505 PRVPPEERYEVERLGP--DGFYRVTLRYGFME 534 (534)
T ss_pred CCCCCceEEEEEEecC--CCEEEEEEEecCCC
Confidence 9999999999999996 48999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-178 Score=1471.86 Aligned_cols=598 Identities=31% Similarity=0.567 Sum_probs=563.0
Q ss_pred HHHHHHHhccceeecccCcChHHHHHHhhcC-CCC-CCcCcEehhHHHHHHHHHHHhhhheeeEEEEecCCCCchHHHHH
Q 003089 99 RKIILAFQTLGVVFGDVGTSPLYTFDVMFSK-API-NDNEDILGALSLVLYTLILIPLVKYVFVVLWANDDGEGGTFALY 176 (849)
Q Consensus 99 ~~l~La~qslGVVyGDIGTSPLYv~~~~F~~-~~~-~~~~dilGvLSLIfWtLtLiv~iKYv~ivL~Add~GEGGtfALy 176 (849)
.+..+.+.|+|||||||||||||+|+++|.. ++. .++++|+|++||||||||+|+++|||++||||||||||||++|+
T Consensus 14 ~~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~ 93 (627)
T COG3158 14 STKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLM 93 (627)
T ss_pred cchhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHH
Confidence 3456889999999999999999999999976 333 67999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCCCCCCCcccccccccccCCCchhhhhHHHHHHHhhhHhHHHHHHHHHHhhhhhhccccccccchhhhhh
Q 003089 177 SLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKRLLLMLVLAGTSMVIADGVVTPAMSVMSA 256 (849)
Q Consensus 177 sLi~r~ak~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~ll~l~llG~sm~igDGvlTPAiSVLSA 256 (849)
+|++|.++ +...++.++|++|+|+++|||+||||||||||
T Consensus 94 aL~~~~~~----------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSA 133 (627)
T COG3158 94 ALARRAAP----------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSA 133 (627)
T ss_pred HHHHhhcC----------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHH
Confidence 99988766 23448999999999999999999999999999
Q ss_pred ccccccccCCCCCCeeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhcccccCCCcCcccccCC
Q 003089 257 VGGLKVGVGAINQDQVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTS 336 (849)
Q Consensus 257 VeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~ 336 (849)
||||+++.|.+ +++|+|||++||++||++||+||++||++|||||++||+++|..|++||+. ||+
T Consensus 134 vEGL~iv~p~~-~~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~--------------~p~ 198 (627)
T COG3158 134 VEGLEIVTPAL-DPYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID--------------DPE 198 (627)
T ss_pred hccccccCccc-cCccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc--------------CHH
Confidence 99999999999 579999999999999999999999999999999999999999999999999 999
Q ss_pred CccceecccChhhHHHHHHH-------HhhHHHHHH----HHh--ccCCCCccceehhhHhHHHHHHHhhccchhhhccC
Q 003089 337 SRGTQLRPGMPLGAVFFVQQ-------VLRQCLQIF----VIF--QCGRFSGCLQLTFVFLVLPCLLLGYLGQAAYLMDN 403 (849)
Q Consensus 337 ~~~~Vl~AlnP~ya~~ff~~-------~LGgVvL~i----ALf--lGHF~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~ 403 (849)
||+|+||+||++|+.+ .||+|+||+ ||| ||||||+|||.||+++|+|||+|||+||||++++|
T Consensus 199 ----IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~ 274 (627)
T COG3158 199 ----ILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSN 274 (627)
T ss_pred ----HHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccC
Confidence 9999999999999999 999999999 999 99999999999999999999999999999999999
Q ss_pred CCcccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCceeEeecCCccCCceEechhHHHHHHH
Q 003089 404 HAGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVV 483 (849)
Q Consensus 404 p~~~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~ 483 (849)
|++..||||.++|+|++||++++||+||||||||+|||+||++|||++||++||+||.|||+++.||||||.|||+|+++
T Consensus 275 p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~ 354 (627)
T COG3158 275 PEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVA 354 (627)
T ss_pred cccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHH
Q 003089 484 CLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLGIELTFFSSVLWSVGDGSWIILVF 563 (849)
Q Consensus 484 ~l~v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F~~ie~~f~sa~l~Kv~~GGW~pl~i 563 (849)
+++++++||+|++||+|||||||++|+|||+|++++|+..|||+.+.+.++.++|+.+|..||+||+.|++||||+|+++
T Consensus 355 V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~plli 434 (627)
T COG3158 355 VVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLL 434 (627)
T ss_pred HhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHhccCCCCccccceEEEEecCCCCcchhHHHhhhhcCccceeEEEEE
Q 003089 564 AIIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVC 643 (849)
Q Consensus 564 a~i~~~iM~~W~~G~~~~~~~~~~~~~s~~~~~~l~~~~~~~RvpG~glf~t~~~~gvP~~f~h~l~~~~alH~~~Vfv~ 643 (849)
|++++++|+||++|+++.+++..++++|++.+++.+++.++.|||||++|+|...+-+|.+++|++|||+++||++||++
T Consensus 435 a~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~lt 514 (627)
T COG3158 435 AAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLT 514 (627)
T ss_pred HHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccccCCCcEEEEEecCCCCcEEEEEEEeeeccccccChhhHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCC
Q 003089 644 IKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDIDSED 723 (849)
Q Consensus 644 ik~~~vP~V~~~eR~~v~r~~~~~~~~yR~v~RyGy~d~~~~~~~~Fe~~Li~~L~~FI~~E~~~~~~~~~~~~~~~~~~ 723 (849)
+++.++|+|+++||+.++++++ +++|+.++|||||+||+ ++.+. . ++.+. -+
T Consensus 515 v~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnv-p~~l~--------~-~~~~G---------~~------ 566 (627)
T COG3158 515 VRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNV-PRALR--------L-CRKKG---------LK------ 566 (627)
T ss_pred EEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCH-HHHHH--------H-HhhcC---------ce------
Confidence 9999999999999999999988 69999999999999999 43221 1 11100 00
Q ss_pred ccccccccccCCCccccCCCcccccccccCCCCCCCCCCCccCCCCCCcchhhHHHHHHHHHHHHhcCcEEEeeecEEEe
Q 003089 724 DLSCSRVLIAPNGSVYSLGAPLLAEYKEKNEPISQPSTSEEVKPELPADSEQSLERELSFIRKAKESGVVYLLGHGDIRA 803 (849)
Q Consensus 724 ~~~~~~~~~~~~~s~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~veeEl~~L~~A~eaGVvYILG~~~VkA 803 (849)
. .-....|.+|++.+++
T Consensus 567 -----------------f----------------------------------------------~im~tsFfl~re~l~~ 583 (627)
T COG3158 567 -----------------F----------------------------------------------DIMETSFFLSRESLIA 583 (627)
T ss_pred -----------------e----------------------------------------------cccceEEEEEeeeeec
Confidence 0 0013579999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeeEeeeEEE
Q 003089 804 RKDSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYM 848 (849)
Q Consensus 804 r~~SsflKKivIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGm~Y~ 848 (849)
+++|++.+ .- +-.|..|.||.-++...++||.+|++|+|-.-|
T Consensus 584 ~~~~g~~~-w~-~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqve 626 (627)
T COG3158 584 SKNSGMPR-WR-DRLFIALARNAASPTDYFKLPPNRVVELGTQVE 626 (627)
T ss_pred CCCCCchH-HH-HHHHHHHHHhcCCHHHhhCCCCCcEEEeeeeee
Confidence 99999865 33 357999999999999999999999999996544
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=89.71 E-value=2.2 Score=49.28 Aligned_cols=46 Identities=13% Similarity=0.224 Sum_probs=26.9
Q ss_pred eehhHHHHHHHHhhhccccccccccc---hhhHHHHHHHHHHHHHHHHh
Q 003089 272 VVMISVAFLVILFSVQKFGTSKVGMA---VGPAYLYGFALLLALEFTTL 317 (849)
Q Consensus 272 Vv~is~~ILv~LF~iQ~~GT~kVg~~---FgPIml~WF~~l~~iGiynI 317 (849)
...++++++++++.+.-+|....+++ +.-+.++=++.+.+.|++.+
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~ 213 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQL 213 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45678888888999999997655543 33222222233344555544
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=88.63 E-value=41 Score=37.69 Aligned_cols=173 Identities=14% Similarity=0.102 Sum_probs=96.1
Q ss_pred eeehhHHHHHHHHhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhcccccCCCcCcccccCCCccceecccChh-h
Q 003089 271 QVVMISVAFLVILFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPGMPL-G 349 (849)
Q Consensus 271 ~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP~-y 349 (849)
....++.+++++++.++-+|....+.+..-..++=++.+.++.+..+.. ++.. ....+..++|. .
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~-------------~~~~-~~~~~~~~~~~~~ 198 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFA-------------FGFS-NGNLFAPFNPGGG 198 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hCcc-ccccCCCcccccc
Confidence 4677899999999999999999999877777766677777777777766 2222 01122222220 0
Q ss_pred HHHHHHHHhhHHHHHH----HHh-ccCC---CCccceehhhHhHHHHHHHhhccchhhhccCCC-ccc-----Ccccc--
Q 003089 350 AVFFVQQVLRQCLQIF----VIF-QCGR---FSGCLQLTFVFLVLPCLLLGYLGQAAYLMDNHA-GAE-----QSFFS-- 413 (849)
Q Consensus 350 a~~ff~~~LGgVvL~i----ALf-lGHF---~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~p~-~~~-----npFy~-- 413 (849)
....+...++.++++. +.- +++= .+|.|-.+-..-+.-+.++-.+++.+....-|. +.. +|+..
T Consensus 199 ~~~~~~~~~~~~~~~f~G~e~~~~~a~E~knp~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 278 (466)
T COG0531 199 SFGGILAAILLAFFAFTGFEAIATLAEEVKNPKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAA 278 (466)
T ss_pred hHHHHHHHHHHHHHHhhcHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHH
Confidence 1112222444444444 111 2222 344455554443333333333333333333332 111 34332
Q ss_pred -ccC-CcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCc
Q 003089 414 -SIP-SGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPR 457 (849)
Q Consensus 414 -siP-~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 457 (849)
... .+..+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 279 ~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 279 LFGGGNWGAIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 223 35666666666666666667777777777777788999998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=86.82 E-value=42 Score=37.79 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=26.5
Q ss_pred eehhHHHHHHHHhhhccccccccc---cchhhHHHHHHHHHHHHHHH
Q 003089 272 VVMISVAFLVILFSVQKFGTSKVG---MAVGPAYLYGFALLLALEFT 315 (849)
Q Consensus 272 Vv~is~~ILv~LF~iQ~~GT~kVg---~~FgPIml~WF~~l~~iGiy 315 (849)
+..+++++++++..+..+|....+ ..+..+.++=++.+.+.|+.
T Consensus 133 ~~~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~ 179 (429)
T TIGR00909 133 FNLPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAI 179 (429)
T ss_pred ccHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 334567777888888888865544 55565555544444444443
No 12
>PRK10655 potE putrescine transporter; Provisional
Probab=85.53 E-value=53 Score=37.27 Aligned_cols=24 Identities=13% Similarity=0.123 Sum_probs=17.2
Q ss_pred hhHHHHHHHHhhhccccccccccc
Q 003089 274 MISVAFLVILFSVQKFGTSKVGMA 297 (849)
Q Consensus 274 ~is~~ILv~LF~iQ~~GT~kVg~~ 297 (849)
.+++++++++..+.-+|+...+++
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i 148 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQI 148 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHH
Confidence 455666777888999997666654
No 13
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=74.07 E-value=1.6e+02 Score=33.62 Aligned_cols=44 Identities=9% Similarity=0.181 Sum_probs=25.4
Q ss_pred ehhHHHHHHHHhhhcccccc---ccccchhhHHHHHHHHHHHHHHHH
Q 003089 273 VMISVAFLVILFSVQKFGTS---KVGMAVGPAYLYGFALLLALEFTT 316 (849)
Q Consensus 273 v~is~~ILv~LF~iQ~~GT~---kVg~~FgPIml~WF~~l~~iGiyn 316 (849)
..+.+++++++..+.-+|.. |+...+.=+.++-++.+.++|++.
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~ 174 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFW 174 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666677777788888875 444444433344444455556543
No 14
>TIGR00930 2a30 K-Cl cotransporter.
Probab=70.77 E-value=2e+02 Score=37.14 Aligned_cols=62 Identities=13% Similarity=0.053 Sum_probs=31.1
Q ss_pred hhhhhhhhhhHHHHHHHcCCCCceeEeecCCccCCceEechhHHHHHHHHhheeeecCCchhhHh
Q 003089 435 SRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCLVFVCSISSNTEMGN 499 (849)
Q Consensus 435 SQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~ 499 (849)
.-+.+.++=-++...-+-|.+|..+... +.+++==.|..-.++..+..++.+.+.+-+.|+.
T Consensus 402 ~la~l~~asRvl~AmArDg~lP~l~~fa---kv~~k~~tP~~Alllt~iIa~l~ili~~l~~ia~ 463 (953)
T TIGR00930 402 ALASLVSAPRLFQALCKDNIYPFLQFFG---KGYGKNGEPLRAYLLTAFIAEGFILIAELNTIAP 463 (953)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcchhhc---ccCCCCCCcHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3444566666666666788999653322 1111112566555544443333334444444444
No 15
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=67.22 E-value=2.3e+02 Score=32.38 Aligned_cols=23 Identities=17% Similarity=0.208 Sum_probs=17.1
Q ss_pred hHHHHHHHHhhhccccccccccc
Q 003089 275 ISVAFLVILFSVQKFGTSKVGMA 297 (849)
Q Consensus 275 is~~ILv~LF~iQ~~GT~kVg~~ 297 (849)
++++++.++..+.-+|+...+.+
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 45566667888999998876664
No 16
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=64.83 E-value=2.7e+02 Score=32.25 Aligned_cols=19 Identities=11% Similarity=0.336 Sum_probs=13.9
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 003089 557 SWIILVFAIIMFFIMFVWN 575 (849)
Q Consensus 557 GW~pl~ia~i~~~iM~~W~ 575 (849)
-|.+++++++++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777666555
No 17
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=59.07 E-value=1.1e+02 Score=33.66 Aligned_cols=54 Identities=13% Similarity=0.090 Sum_probs=39.3
Q ss_pred hHhhhhhHhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHH----HHHHHHHhhh
Q 003089 497 MGNAYGIAELGVMMMTTVLVTIVMLLIWQINIVIVLSFVVVFLG----IELTFFSSVL 550 (849)
Q Consensus 497 l~~AYGiAV~~vM~iTT~L~~lV~~~vW~~~~~~~~~f~~~F~~----ie~~f~sa~l 550 (849)
-=..||.+|..+.++.++-++..+..+++.++|.+++|.++++. +|-..+|+.-
T Consensus 14 k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~ 71 (301)
T PF14362_consen 14 KYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIR 71 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34578999999999999888888888888887776666655544 5655555443
No 18
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=58.68 E-value=3.9e+02 Score=32.09 Aligned_cols=44 Identities=14% Similarity=0.286 Sum_probs=25.0
Q ss_pred eehhHHHHHHHHhhhccccccccccc---hhhHHHHHHHHHHHHHHH
Q 003089 272 VVMISVAFLVILFSVQKFGTSKVGMA---VGPAYLYGFALLLALEFT 315 (849)
Q Consensus 272 Vv~is~~ILv~LF~iQ~~GT~kVg~~---FgPIml~WF~~l~~iGiy 315 (849)
...+++++++++..+--+|+...+++ +.-+.++-++.+.+.|+.
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~ 207 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFT 207 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 34466777777778888897666543 333333333444444544
No 19
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=53.71 E-value=3.3e+02 Score=31.54 Aligned_cols=43 Identities=16% Similarity=0.019 Sum_probs=25.6
Q ss_pred cCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCc
Q 003089 415 IPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPR 457 (849)
Q Consensus 415 iP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 457 (849)
..++...-+.+.+.+++.-+..+.+.+.--+..+.-+-|.+|+
T Consensus 278 ~g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~ 320 (473)
T TIGR00905 278 VGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320 (473)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 3444444344444444444555666666666667778899996
No 20
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=52.93 E-value=4e+02 Score=30.40 Aligned_cols=24 Identities=8% Similarity=0.438 Sum_probs=17.3
Q ss_pred hhHHHHHHHHhhhccccccccccc
Q 003089 274 MISVAFLVILFSVQKFGTSKVGMA 297 (849)
Q Consensus 274 ~is~~ILv~LF~iQ~~GT~kVg~~ 297 (849)
.++++++++++.+.-+|....+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455666777778888888777664
No 21
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=50.75 E-value=1.3e+02 Score=33.65 Aligned_cols=222 Identities=14% Similarity=0.125 Sum_probs=109.6
Q ss_pred eehhHHHHHHHHhhhccccccccccch---hhHHH-HHHHHHHHHHHHHhhhcccccCCCcCcccccCCCccceecccCh
Q 003089 272 VVMISVAFLVILFSVQKFGTSKVGMAV---GPAYL-YGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPGMP 347 (849)
Q Consensus 272 Vv~is~~ILv~LF~iQ~~GT~kVg~~F---gPIml-~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP 347 (849)
...++++++++.+.+.-+|....+++- +=+.+ +-++.+.+.|++..-+ ++.+...... +. .+....|
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~----~~~~~~~~~~-~~----~~~~~~~ 188 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF----SGFNSLSFSL-ST----FFPSGWP 188 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC----CHHH----SH-SC----SSCSSSS
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc----cccccccccc-cc----cCCcccc
Confidence 456788888889999999987666543 32333 3444555566665433 0100000000 01 2222344
Q ss_pred hhHHHHHHHHhhHHHHHH-----HHh-ccCCCCccceehhhHhHHHHHHHhhccchhhhccCCCc----ccC------cc
Q 003089 348 LGAVFFVQQVLRQCLQIF-----VIF-QCGRFSGCLQLTFVFLVLPCLLLGYLGQAAYLMDNHAG----AEQ------SF 411 (849)
Q Consensus 348 ~ya~~ff~~~LGgVvL~i-----ALf-lGHF~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~p~~----~~n------pF 411 (849)
. +...+...+.+. +-+ -+..-+|.+..+=..-+.-+.++.-+..-++...-|.+ .+| .+
T Consensus 189 ~-----~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (426)
T PF13520_consen 189 G-----FLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVL 263 (426)
T ss_dssp H-----HHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHH
T ss_pred c-----hhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchh
Confidence 2 112222222332 122 34433455554433322223333223333333332221 112 22
Q ss_pred ccc-cCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCceeEeecCCccCCceEechhHHHHHHHHh-hee-
Q 003089 412 FSS-IPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVVCL-VFV- 488 (849)
Q Consensus 412 y~s-iP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~l-~v~- 488 (849)
++. -.++..+.+.+++.++.+-+-.+.+.+.--++.+.-+-|.+|+ +..|++ | +| .|..-.+++..+. ++.
T Consensus 264 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~-k-~~---~P~~a~~~~~~i~~i~~~ 337 (426)
T PF13520_consen 264 ASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVN-K-FG---TPYNAIILVAVISSILLL 337 (426)
T ss_dssp HHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTS-S-SS---SCHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhcc-c-cC---CceeeehhhhHHHHHHHH
Confidence 232 2468888888888888888777777777777777888899993 333333 2 22 2655544444333 222
Q ss_pred -eec---CCchhhHhhhhhHhHHHHHHHH
Q 003089 489 -CSI---SSNTEMGNAYGIAELGVMMMTT 513 (849)
Q Consensus 489 -~~F---~~s~~l~~AYGiAV~~vM~iTT 513 (849)
..| ++-+.+.+.+.+......+++.
T Consensus 338 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 338 LFLFIPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp HTTTSSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223 2345667766666666666653
No 22
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=46.23 E-value=26 Score=41.33 Aligned_cols=111 Identities=14% Similarity=0.061 Sum_probs=67.9
Q ss_pred eeehhHHHHHHHHhhhcccccccccc--chhhHHHHHHHHHHHHH--HHHhhhcccccCCCcCcccccCCCccceeccc-
Q 003089 271 QVVMISVAFLVILFSVQKFGTSKVGM--AVGPAYLYGFALLLALE--FTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPG- 345 (849)
Q Consensus 271 ~Vv~is~~ILv~LF~iQ~~GT~kVg~--~FgPIml~WF~~l~~iG--iynI~~~~~~~~~~~~~~~~~p~~~~~Vl~Al- 345 (849)
|=+.++++||+++++.+|.-..+ |. =..--+++|-+.-+++| +|.++. ++. .+..-
T Consensus 26 YGl~ialGil~a~~l~~r~~kr~-g~~~~~i~dl~i~~vi~giIGARL~yVl~--------------~~~----~y~~~~ 86 (460)
T PRK13108 26 YAVCVITGIIVALLIGDRRLTAR-GGERGMTYDIALWAVPFGLIGGRLYHLAT--------------DWR----TYFGDG 86 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhHHHHhc--------------CHH----HHhccc
Confidence 45678888888887776554332 21 11223567888888888 777776 566 44432
Q ss_pred -Chh-hHHHHHHH---HhhHHHHHH-HHh-ccCCCCccceehhhHhHHHHHHHhhc-cchhhhc
Q 003089 346 -MPL-GAVFFVQQ---VLRQCLQIF-VIF-QCGRFSGCLQLTFVFLVLPCLLLGYL-GQAAYLM 401 (849)
Q Consensus 346 -nP~-ya~~ff~~---~LGgVvL~i-ALf-lGHF~~~~Iqiaw~~~V~P~LlL~Y~-GQaA~Ll 401 (849)
||. -++++... .-||++.++ ++| ..+..+.++ +.|.=++-|++.|+++ |.=.-++
T Consensus 87 ~~P~~~il~iw~GGLsi~GGlIGg~l~~~~y~r~~ki~~-~~~~D~~ap~l~lGqaiGRiGnF~ 149 (460)
T PRK13108 87 GAGLAAALRIWDGGLGIWGAVTLGVMGAWIGCRRCGIPL-PVLLDAVAPGVVLAQAIGRLGNYF 149 (460)
T ss_pred cChHHHHHhhccCCchHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 677 66655533 788887777 555 444333332 2444456799988875 6544444
No 23
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=45.43 E-value=16 Score=42.77 Aligned_cols=91 Identities=26% Similarity=0.411 Sum_probs=60.0
Q ss_pred HHcCCCCceeEeecCCccCC----ceEechhHHHHHHHHhheeeecCCchhhHhhhhhHhHHHHHHHHHHHHHHHH----
Q 003089 450 TALGCFPRLKIIHTSRKFMG----QIYIPVINWFLLVVCLVFVCSISSNTEMGNAYGIAELGVMMMTTVLVTIVML---- 521 (849)
Q Consensus 450 i~Lg~fPrvkIvHTS~~~~G----QIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~---- 521 (849)
.+.|-.||+-+..+=++..| |+|+|.+ |+ ..+-=|.--=|.++-.+=-.+++|+|..|||++...=.-
T Consensus 224 ~sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~---Li-VilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrv 299 (459)
T KOG3643|consen 224 FSTGNYSRLSLSFQLRRNIGFYILQTYIPST---LI-VILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRV 299 (459)
T ss_pred EccccceeEEEEEEEEeeccEEEEeeecchh---hh-hHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCc
Confidence 34799999999998888888 9999975 11 111112222345555666788999999999988765221
Q ss_pred -HHhchhhhHHHHHHHHHHH-HHHH
Q 003089 522 -LIWQINIVIVLSFVVVFLG-IELT 544 (849)
Q Consensus 522 -~vW~~~~~~~~~f~~~F~~-ie~~ 544 (849)
+|--.-+.+..+|+.+|++ +|-+
T Consensus 300 SYVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 300 SYVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred cceeeehhhhhHHHHHHHHHHHHHH
Confidence 1233446667788877776 4544
No 24
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=44.81 E-value=1.6e+02 Score=33.91 Aligned_cols=26 Identities=19% Similarity=0.654 Sum_probs=18.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 003089 557 SWIILVFAIIMFFIMFVWNYGSKLKY 582 (849)
Q Consensus 557 GW~pl~ia~i~~~iM~~W~~G~~~~~ 582 (849)
-|.++++++++...+..|....++.|
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~~~ 479 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRKEF 479 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEeceeec
Confidence 59999998888888877765434433
No 25
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=43.41 E-value=10 Score=41.97 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=24.0
Q ss_pred ccCCCCccceehhhHhHHHHHHHhhccch--hhhccCCCccc
Q 003089 369 QCGRFSGCLQLTFVFLVLPCLLLGYLGQA--AYLMDNHAGAE 408 (849)
Q Consensus 369 lGHF~~~~Iqiaw~~~V~P~LlL~Y~GQa--A~Ll~~p~~~~ 408 (849)
=++|||.+|||+|-.--=+| ||+ .=|++|||-+.
T Consensus 172 k~Y~GRG~iQlsWNyNYG~a------g~alg~dLL~~Pe~V~ 207 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNYNYGAA------GKALGLDLLRNPELVA 207 (286)
T ss_pred CcccccCcccccccccccHh------HhhcCchhhcCcchhc
Confidence 58999999999997722122 332 34788999776
No 26
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=43.38 E-value=1.4e+02 Score=31.27 Aligned_cols=21 Identities=19% Similarity=0.618 Sum_probs=17.1
Q ss_pred CchHHHHHHHHHHHHHHHHHH
Q 003089 556 GSWIILVFAIIMFFIMFVWNY 576 (849)
Q Consensus 556 GGW~pl~ia~i~~~iM~~W~~ 576 (849)
.+|+-+++|++.+.+-+-|+.
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999988866653
No 27
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=39.99 E-value=27 Score=37.75 Aligned_cols=31 Identities=29% Similarity=0.673 Sum_probs=25.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 003089 552 SVGDGSWIILVFAIIMFFIMFVWNYGSKLKY 582 (849)
Q Consensus 552 Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~ 582 (849)
|=.+|||+.++.+++...+..+|++--+.+.
T Consensus 257 ~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 257 VSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred cccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 3348999999999999999999998655553
No 28
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=37.76 E-value=5.7e+02 Score=29.29 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=16.6
Q ss_pred hhHHHHHHHHhhhccccccccccc
Q 003089 274 MISVAFLVILFSVQKFGTSKVGMA 297 (849)
Q Consensus 274 ~is~~ILv~LF~iQ~~GT~kVg~~ 297 (849)
.+.+++++++..+.-+|+...+++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHH
Confidence 355666667778888888666553
No 29
>PRK12361 hypothetical protein; Provisional
Probab=36.88 E-value=27 Score=41.49 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=51.6
Q ss_pred HhhHHHHHHHHhccCCCCccceehhhHhHHHHHHHhhccchhhhccCCCcccCccccccCCcchHHHHHHHHHHHHH
Q 003089 357 VLRQCLQIFVIFQCGRFSGCLQLTFVFLVLPCLLLGYLGQAAYLMDNHAGAEQSFFSSIPSGAFWPVLLIANIAALI 433 (849)
Q Consensus 357 ~LGgVvL~iALflGHF~~~~Iqiaw~~~V~P~LlL~Y~GQaA~Ll~~p~~~~npFy~siP~~~~wP~~vlAtlAaII 433 (849)
.+|++++++|.++++-.--++-+.|..+++-+.-++|.|-++-+.....+-.-|++. .|+|+|.++.|-+-...
T Consensus 12 ~~ga~~~~~~~~~~~~~~~~~~~~w~~~~~~~v~~~y~~~~~~~f~k~~~g~~~~~~---~~l~~P~l~~~~~~~~~ 85 (547)
T PRK12361 12 LAGALLLLYLAVTGPSILLTFLFAWISLSLFLVGSAYWFNLASIFRKRQDGTIPWYI---RWVFIPFLLGTRLYNAW 85 (547)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhcccHhhCCCCCCcchHHH---HHHHHHHHHHHHHHHHH
Confidence 678855555545444333345677888888888899999888887765555544444 58999999988886633
No 30
>PRK11021 putative transporter; Provisional
Probab=32.40 E-value=7.8e+02 Score=27.82 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=21.6
Q ss_pred eehhHHHHHHHHhhhccccccccccchh
Q 003089 272 VVMISVAFLVILFSVQKFGTSKVGMAVG 299 (849)
Q Consensus 272 Vv~is~~ILv~LF~iQ~~GT~kVg~~Fg 299 (849)
..++++++++++..+.-+|....+++-.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~ 142 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQT 142 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3567788888889999999888776543
No 31
>KOG1834 consensus Calsyntenin [Extracellular structures]
Probab=31.88 E-value=38 Score=41.57 Aligned_cols=13 Identities=15% Similarity=0.105 Sum_probs=8.1
Q ss_pred ccCCccccCCCCc
Q 003089 5 TSGGLEATNGVGL 17 (849)
Q Consensus 5 ~~~~~~~~~~~~~ 17 (849)
.++++|+=++.++
T Consensus 865 ~kd~~m~WDDSal 877 (952)
T KOG1834|consen 865 QKDGEMDWDDSAL 877 (952)
T ss_pred ccCCCCCcccccc
Confidence 4566676666663
No 32
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=31.88 E-value=15 Score=40.91 Aligned_cols=62 Identities=19% Similarity=0.520 Sum_probs=0.0
Q ss_pred HHHHHHhc--hhhhHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHH---HHHHHHHHHHHHHHHHHH
Q 003089 518 IVMLLIWQ--INIVIVLSFVVVFLGIELTFFSSVLWSVGDGSWIILVFA---IIMFFIMFVWNYGSKLKY 582 (849)
Q Consensus 518 lV~~~vW~--~~~~~~~~f~~~F~~ie~~f~sa~l~Kv~~GGW~pl~ia---~i~~~iM~~W~~G~~~~~ 582 (849)
++|.+.|+ -++|..+.|++.|+.-=++...|++. +=.||++++- .++|.-.++|-|-+....
T Consensus 124 ~Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L---~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 124 FYMWLLRELGASFWTILAFCLAFLLAIVLLIIAVLL---HQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp ----------------------------------------------------------------------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 33555565 46888888888887765666666654 5689999765 467777889998876553
No 33
>PF04931 DNA_pol_phi: DNA polymerase phi; InterPro: IPR007015 Proteins of this family are predominantly nucleolar. The majority are described as transcription factor transactivators. The family also includes the fifth essential DNA polymerase (Pol5p) of Schizosaccharomyces pombe (Fission yeast) and Saccharomyces cerevisiae (Baker's yeast) (2.7.7.7 from EC). Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006351 transcription, DNA-dependent
Probab=31.77 E-value=27 Score=43.48 Aligned_cols=6 Identities=33% Similarity=0.534 Sum_probs=2.9
Q ss_pred cccccc
Q 003089 77 FDVEAL 82 (849)
Q Consensus 77 ~~~ea~ 82 (849)
||.|++
T Consensus 729 mdDe~m 734 (784)
T PF04931_consen 729 MDDEQM 734 (784)
T ss_pred cCHHHH
Confidence 555444
No 34
>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=31.44 E-value=41 Score=43.85 Aligned_cols=22 Identities=9% Similarity=0.138 Sum_probs=12.3
Q ss_pred HhhHHHHHH-HHh--ccCCCCccce
Q 003089 357 VLRQCLQIF-VIF--QCGRFSGCLQ 378 (849)
Q Consensus 357 ~LGgVvL~i-ALf--lGHF~~~~Iq 378 (849)
+|--|-|.+ |+| +-....+||-
T Consensus 2140 mL~~VAlVadA~fhfik~~~eqpie 2164 (3015)
T KOG0943|consen 2140 MLKHVALVADALFHFIKAMNEQPIE 2164 (3015)
T ss_pred hhhHHHHHHHHHHHHHHhcccCccc
Confidence 444444444 776 6656666664
No 35
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=31.37 E-value=6.9e+02 Score=28.97 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=19.8
Q ss_pred ccchHHHHHHHHHhccceeecccCcChHHHHHHhhcC
Q 003089 93 EEFSVGRKIILAFQTLGVVFGDVGTSPLYTFDVMFSK 129 (849)
Q Consensus 93 ~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~F~~ 129 (849)
++.+.+....++.++ =|||.-+..-+.++..
T Consensus 20 r~l~~~~~~~i~vG~------~IGsGif~~~g~~~~~ 50 (469)
T PRK11049 20 RNLTNRHIQLIAIGG------AIGTGLFMGSGKTISL 50 (469)
T ss_pred ccCcHHHHHHHHHhh------HHHhHHHHHhhHHHhh
Confidence 345666655555444 2888888877777654
No 36
>PRK15049 L-asparagine permease; Provisional
Probab=30.45 E-value=9.6e+02 Score=28.29 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=20.8
Q ss_pred cchHHHHHHHHHhccceeecccCcChHHHHHHhhcCC
Q 003089 94 EFSVGRKIILAFQTLGVVFGDVGTSPLYTFDVMFSKA 130 (849)
Q Consensus 94 ~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~F~~~ 130 (849)
+.+.+....+++++. |||-.+.....++...
T Consensus 29 ~L~~~~~~~i~~G~~------IGsGiF~~~g~~~~~a 59 (499)
T PRK15049 29 AMGNRQVQMIAIGGA------IGTGLFLGAGARLQMA 59 (499)
T ss_pred cCCHhHhHHHhhhcc------ccchHHHhhHHHHHhc
Confidence 455666555555443 8999888888888653
No 37
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=26.46 E-value=7e+02 Score=28.99 Aligned_cols=105 Identities=10% Similarity=0.022 Sum_probs=65.2
Q ss_pred HhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhcccccCCCcCcccccCCCccceecccCh---hhHHHHHHHHhh
Q 003089 283 LFSVQKFGTSKVGMAVGPAYLYGFALLLALEFTTLSNMTAVSGGHLIPFTYTTSSRGTQLRPGMP---LGAVFFVQQVLR 359 (849)
Q Consensus 283 LF~iQ~~GT~kVg~~FgPIml~WF~~l~~iGiynI~~~~~~~~~~~~~~~~~p~~~~~Vl~AlnP---~ya~~ff~~~LG 359 (849)
++.+=-+||.-+-+.-+.++..=.+.+..+.+|.+.+ ||++ .+.+.-. .+. .++...++
T Consensus 139 ~~~l~~~~~~~~lk~ts~l~~~~v~~~~~l~~~~~~~-------------~~~~----~l~~~~~~~~~~~-~~~~~~ip 200 (415)
T COG0814 139 LAFLSWLGTLAVLKITSLLVFGKVIYLVLLVVYLIPH-------------WNPA----NLFALPSASQSFW-KYLLLAIP 200 (415)
T ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------cCHH----HHhcccccchhhH-HHHHHHhh
Confidence 3335567788888888888888788888888899988 8888 7766421 221 11222666
Q ss_pred HHHHHH-------HHh--ccCCCCccceehhhHh-HH---HHHHHhhccchhhhccCCC
Q 003089 360 QCLQIF-------VIF--QCGRFSGCLQLTFVFL-VL---PCLLLGYLGQAAYLMDNHA 405 (849)
Q Consensus 360 gVvL~i-------ALf--lGHF~~~~Iqiaw~~~-V~---P~LlL~Y~GQaA~Ll~~p~ 405 (849)
-++.|+ .++ |+|-.++++|.+-... +. =+++..++|++++...-++
T Consensus 201 v~vfsF~~h~~i~si~~~~~~~~~~~~~k~~~~~~~~~~vlyi~~~~~~~~~~~~~~~~ 259 (415)
T COG0814 201 VFVFSFGFHGNIPSLVNYMRKNSKKAVRKAILIGSLIALVLYILVGFFVFGCFGSLVFG 259 (415)
T ss_pred HHHhhhhCCccchHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHH
Confidence 666666 555 8888887555432221 12 2334456677766666444
No 38
>PF03115 Astro_capsid: Astrovirus capsid protein precursor; InterPro: IPR004337 The astrovirus genome is apparently organised with nonstructural proteins encoded at the 5' end and structural proteins at the 3' end []. Proteins in this family are encoded by astrovirus ORF2, one of the three astrovirus ORFs (1a, 1b, 2). The proteins contain a viral RNA-dependent RNA polymerase motif []. The 87kDa precursor polyprotein undergoes an intracellular cleavage to form a 79kDa protein. Subsequently, extracellular trypsin cleavage yields the three proteins forming the infectious virion [].; PDB: 3QSQ_A 3TS3_D.
Probab=23.10 E-value=28 Score=43.68 Aligned_cols=10 Identities=30% Similarity=0.212 Sum_probs=0.0
Q ss_pred cccccccccC
Q 003089 62 NGEQRLIRTG 71 (849)
Q Consensus 62 ~~~~~~~~~~ 71 (849)
+.|.-+.++.
T Consensus 708 ~~R~~L~nTL 717 (787)
T PF03115_consen 708 NNRVTLFNTL 717 (787)
T ss_dssp ----------
T ss_pred hhHHHHHHHH
Confidence 3344444443
No 39
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=23.08 E-value=1.2e+03 Score=26.90 Aligned_cols=29 Identities=21% Similarity=0.206 Sum_probs=17.0
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHcCCCCc
Q 003089 429 IAALIASRAMTTATFSCIKQSTALGCFPR 457 (849)
Q Consensus 429 lAaIIASQA~ISg~FSii~Qai~Lg~fPr 457 (849)
++.+-+-.+.+.++=-++.+.-+-|.+|+
T Consensus 299 ~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 327 (478)
T TIGR00913 299 ISVLSAANSSLYASSRTLYALAHQGLAPK 327 (478)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhCCcccH
Confidence 33333334445555556666667899995
No 40
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.77 E-value=3e+02 Score=32.91 Aligned_cols=19 Identities=11% Similarity=0.322 Sum_probs=13.5
Q ss_pred hhhhhHhHHHHHHHHHHHH
Q 003089 499 NAYGIAELGVMMMTTVLVT 517 (849)
Q Consensus 499 ~AYGiAV~~vM~iTT~L~~ 517 (849)
..||++++..+++...+..
T Consensus 24 ~~YGl~ialGil~a~~l~~ 42 (460)
T PRK13108 24 RAYAVCVITGIIVALLIGD 42 (460)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6788888888877555443
No 41
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=22.69 E-value=16 Score=37.98 Aligned_cols=61 Identities=18% Similarity=0.361 Sum_probs=47.5
Q ss_pred HHHHHhcCcEEEeeecEEEecCCCchHHHHHHHHHHHHH---HhhccCCCcccccCCCCeeEeee
Q 003089 784 IRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFL---RKNCRRGIANLSVPHSNLMQVGM 845 (849)
Q Consensus 784 L~~A~eaGVvYILG~~~VkAr~~SsflKKivIN~~Y~FL---RkNcR~~~~~L~IPh~~LleVGm 845 (849)
+++++++|.--++=.. .+.++=..+..|+-|||+|.-. ++++|...+.+++|.++.+-||-
T Consensus 55 ~~e~k~~gi~v~vvSN-n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 55 LAELKEAGIKVVVVSN-NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred HHHHHhcCCEEEEEeC-CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 5667788875544332 5666667889999999888764 67889999999999999999984
No 42
>PF10446 DUF2457: Protein of unknown function (DUF2457); InterPro: IPR018853 This entry represents a family of uncharacterised proteins.
Probab=21.61 E-value=38 Score=39.77 Aligned_cols=8 Identities=25% Similarity=0.339 Sum_probs=3.8
Q ss_pred ccccchhh
Q 003089 246 VVTPAMSV 253 (849)
Q Consensus 246 vlTPAiSV 253 (849)
..||..|.
T Consensus 322 ~~~p~~~~ 329 (458)
T PF10446_consen 322 STSPPASP 329 (458)
T ss_pred ccCCCCCC
Confidence 34455544
No 43
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=20.77 E-value=1.3e+03 Score=26.61 Aligned_cols=45 Identities=11% Similarity=-0.139 Sum_probs=30.5
Q ss_pred ccCCcchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHcCCCCce
Q 003089 414 SIPSGAFWPVLLIANIAALIASRAMTTATFSCIKQSTALGCFPRL 458 (849)
Q Consensus 414 siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPrv 458 (849)
...++..+.+.+.+.++.+-+..+.+.++--+..+.-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 344555555556666666666667777777777777788999964
No 44
>PRK14417 membrane protein; Provisional
Probab=20.41 E-value=7.7e+02 Score=27.07 Aligned_cols=17 Identities=12% Similarity=0.339 Sum_probs=13.7
Q ss_pred ecCCchhhHhhhhhHhH
Q 003089 490 SISSNTEMGNAYGIAEL 506 (849)
Q Consensus 490 ~F~~s~~l~~AYGiAV~ 506 (849)
.||-...+|-+-|+...
T Consensus 101 ~FKGGKGVAt~~Gvll~ 117 (232)
T PRK14417 101 RFNGGRGIATSLGVALV 117 (232)
T ss_pred CCcChhHHHHHHHHHHH
Confidence 59999989888887644
No 45
>PRK11909 cobalt transport protein CbiM; Provisional
Probab=20.37 E-value=6.1e+02 Score=27.48 Aligned_cols=64 Identities=9% Similarity=0.057 Sum_probs=34.9
Q ss_pred HHHHHHHhhccchhhhccCC----CcccCccccccCCcchHHHHHHHHHHHHHHhhhhhhhh-hhHHHH
Q 003089 385 VLPCLLLGYLGQAAYLMDNH----AGAEQSFFSSIPSGAFWPVLLIANIAALIASRAMTTAT-FSCIKQ 448 (849)
Q Consensus 385 V~P~LlL~Y~GQaA~Ll~~p----~~~~npFy~siP~~~~wP~~vlAtlAaIIASQA~ISg~-FSii~Q 448 (849)
.+=+.+++++.-+--|.-.| +...+|+|...|-....|.+..+-+.-+---+++||+. .+.++.
T Consensus 143 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~h~~i~~i~Eg~iT~~~~~~l~~ 211 (230)
T PRK11909 143 GYVGINAAALATGIEFGLQPFLFHTANGTPLYCPYGLNVSIPAMLFAHLTVAGIVEAIVTGLVVYYLQK 211 (230)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555655555554443 34456777777766666666666555312226777654 344433
No 46
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=20.00 E-value=96 Score=29.57 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=22.0
Q ss_pred cEEEEEecCCCCcEEEEEEEeeeccccc
Q 003089 657 RFLFRRVCPKSYHIFRCIARYGYKDVRK 684 (849)
Q Consensus 657 R~~v~r~~~~~~~~yR~v~RyGy~d~~~ 684 (849)
-+.+..+...+.+.|+|.+.+|.-|..+
T Consensus 75 sL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 75 TLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred EEEEeecccccCEEEEEEEecCCCCcee
Confidence 3566667777889999999999877654
Done!