BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003094
(848 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356516495|ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 922
Score = 1417 bits (3668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/767 (93%), Positives = 741/767 (96%), Gaps = 2/767 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 158 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 215
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP+NIRTQVIRMVGES ++V A VG GSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 216 NLGADPTNIRTQVIRMVGESADSVTATVGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 275
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 276 GRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 335
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 336 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 395
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 396 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 455
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQI
Sbjct: 456 LRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQI 515
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK EAVR QDFEKAGELRDREMDLKAQIS LV+KGKEMSKAETEAGD GP+VTE DIQ
Sbjct: 516 IKEKEEAVRNQDFEKAGELRDREMDLKAQISTLVEKGKEMSKAETEAGDEGPIVTEADIQ 575
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 576 HIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 635
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 636 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 695
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 696 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 755
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 756 SNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 815
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK KDIELQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLE
Sbjct: 816 TKLEVKEIADIMLKEVFDRLKVKDIELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLE 875
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVDSDGNV VLNGSSGAPESL + LPV
Sbjct: 876 DSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGSSGAPESLPETLPV 922
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 117/161 (72%), Gaps = 6/161 (3%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR+LAQ N P LV RH Q + +GK +R+ KMMS ++ + R+S FSGLR N LDT
Sbjct: 1 MARVLAQSVNVPGLVAEHRHGQQKGSGKLKRSTKMMSALRTNGLRMSGFSGLRTFNPLDT 60
Query: 61 FT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
DFHS V+++ SSR+ ++ R V KAMFERFTEKAIKVIMLAQEEARRLGHN+
Sbjct: 61 MLRPGIDFHSKVSIATSSRQARATRC---VPKAMFERFTEKAIKVIMLAQEEARRLGHNF 117
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
+G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 118 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 158
>gi|356508861|ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
[Glycine max]
gi|356508863|ref|XP_003523173.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 2
[Glycine max]
Length = 922
Score = 1415 bits (3664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/767 (93%), Positives = 740/767 (96%), Gaps = 2/767 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 158 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 215
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP+NIRTQVIRMVGES ++V A VG GSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 216 NLGADPTNIRTQVIRMVGESADSVTATVGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 275
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 276 GRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 335
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 336 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 395
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 396 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 455
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQI
Sbjct: 456 LRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQI 515
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK EAVR QDFEKAGELRDREMDLKAQIS LV+KGKEMSKAE+EAGD PVVTE DIQ
Sbjct: 516 IKEKEEAVRNQDFEKAGELRDREMDLKAQISTLVEKGKEMSKAESEAGDASPVVTEADIQ 575
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 576 HIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 635
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 636 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 695
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 696 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 755
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 756 SNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 815
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF+RLK KDIELQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLE
Sbjct: 816 TKLEVKEIADIMLKEVFERLKVKDIELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLE 875
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVDSDGNV VLNGSSGAPESL + LPV
Sbjct: 876 DSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGSSGAPESLPEALPV 922
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 117/161 (72%), Gaps = 6/161 (3%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR+LAQ N P L+ RH Q + +GK +R+ KMMS ++ + R+S FSGLR N LDT
Sbjct: 1 MARVLAQSINVPGLLAEHRHGQQKESGKLKRSTKMMSALRTNGLRMSGFSGLRTFNPLDT 60
Query: 61 FT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
DFHS V+++ SSRR ++ R V KAMFERFTEKAIKVIMLAQEEARRLGHN+
Sbjct: 61 MLRPGIDFHSKVSIATSSRRARATRC---VPKAMFERFTEKAIKVIMLAQEEARRLGHNF 117
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
+G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 118 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 158
>gi|255540075|ref|XP_002511102.1| ATP-dependent clp protease, putative [Ricinus communis]
gi|223550217|gb|EEF51704.1| ATP-dependent clp protease, putative [Ricinus communis]
Length = 924
Score = 1412 bits (3654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/768 (93%), Positives = 740/768 (96%), Gaps = 2/768 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 159 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 216
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGESTE + A VG G NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 217 NLGADPSNIRTQVIRMVGESTENIPAPVGPGGGSNKMPTLEEYGTNLTKLAEEGKLDPVV 276
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERV+QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIE KKVITLD
Sbjct: 277 GRQPQIERVIQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIERKKVITLD 336
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 337 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 396
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK
Sbjct: 397 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 456
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKE+RQI
Sbjct: 457 LRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKEVRQI 516
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEK+EAVR QDFEKAGELRDREMDL+AQI+A+V+KGKEMSKAETEAGDVGP+V E DIQ
Sbjct: 517 TKEKDEAVRSQDFEKAGELRDREMDLRAQIAAIVEKGKEMSKAETEAGDVGPLVNESDIQ 576
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 577 HIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 636
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 637 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 696
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 697 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 756
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 757 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 816
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE
Sbjct: 817 TKLEVKEIADIMLKEVFDRLKVKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 876
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
DSMAEKMLA EIKEGDSVIVDVDSDGNV VLNGSSG+PE+L D L VV
Sbjct: 877 DSMAEKMLAGEIKEGDSVIVDVDSDGNVIVLNGSSGSPEALPDVLSVV 924
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRN-VKMMSYMQPSASRISSFSGLRRSNALD 59
MARLL N PAL P +H QSQ +G SRR KMM + A + ++GLR SN LD
Sbjct: 1 MARLLVHSINVPALAPHIKHGQSQESGTSRRTATKMMCSSRLPALTLRGYTGLRSSNCLD 60
Query: 60 TFT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHN 116
T DFHS VA+++S R+ K+ R F+ +AMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 61 TMLRSGLDFHSRVAITMSRRQQKAKR---FLPRAMFERFTEKAIKVIMLAQEEARRLGHN 117
Query: 117 YIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 118 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 162
>gi|225456471|ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic-like [Vitis vinifera]
Length = 923
Score = 1405 bits (3637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 726/768 (94%), Positives = 749/768 (97%), Gaps = 3/768 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 158 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 215
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGESTEAVGAGVGGG++GNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 216 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVV 275
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 276 GRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 335
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 336 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 395
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK
Sbjct: 396 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 455
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALVSAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI
Sbjct: 456 LRYTDEALVSAARLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 515
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVR QDFEKAGELRDREMDLKAQIS L+DKGKEM+KAETEAGD+GP+VTEVDIQ
Sbjct: 516 TKEKNEAVRSQDFEKAGELRDREMDLKAQISTLIDKGKEMTKAETEAGDIGPMVTEVDIQ 575
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVSAWTGIPVEKVSTDESDRLLKMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 576 HIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRP 635
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 636 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 695
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 696 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 755
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 756 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 815
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVK+IADIMLKEVF+RLK KDIELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 816 TKLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 875
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA-PESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA PESL + +PV
Sbjct: 876 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPPESLPEAMPV 923
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 6/164 (3%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR L Q TN A V G+H + Q + +++++VKMM +Q RI FSGLR +NALD
Sbjct: 1 MARALVQSTNIFASVADGKHGKFQGSERTKKSVKMMCNVQAPGLRIRGFSGLRGANALDN 60
Query: 61 FT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
DFHS VA ++S R GK+ R V +AMFERFTEKAIKVIMLAQEEARRLGHN+
Sbjct: 61 LVRSGHDFHSRVAAAISVRGGKASRC---VARAMFERFTEKAIKVIMLAQEEARRLGHNF 117
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
+G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 118 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 161
>gi|449470390|ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
gi|449505877|ref|XP_004162592.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 924
Score = 1404 bits (3633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 726/768 (94%), Positives = 752/768 (97%), Gaps = 3/768 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GGFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 159 GRGGGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 216
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP+NIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 217 NLGADPANIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 276
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 277 GRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 336
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 337 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 396
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK
Sbjct: 397 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 456
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEAL +AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA+E+EKELRQI
Sbjct: 457 LRYTDEALEAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKEVEKELRQI 516
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKN+AVR QDFEKAGELRDREM+LKA+ISAL+DKGKEMSKAE+EAGDVGPVVTEVDIQ
Sbjct: 517 TKEKNDAVRSQDFEKAGELRDREMELKAKISALIDKGKEMSKAESEAGDVGPVVTEVDIQ 576
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 577 HIVSSWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRP 636
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 637 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 696
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 697 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 756
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRR+GFDLDYDEKDSSY RIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 757 SNVGSSVIEKGGRRMGFDLDYDEKDSSYTRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 816
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK K+I+LQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 817 TKLEVKEIADIMLKEVFDRLKGKEIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 876
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG-APESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG APESLADP+PV
Sbjct: 877 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAAPESLADPIPV 924
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 115/161 (71%), Gaps = 5/161 (3%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR+L Q TN P LV + S+ +G ++R VKMMS + R+ SFSGLR N+LD
Sbjct: 1 MARVLVQPTNIPGLVVARKSPSSRGSGNAKRVVKMMSSVHSPGMRMRSFSGLRGLNSLDN 60
Query: 61 F---TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
DFHS VA+++SSRRG GR V +AMFERFTEKAIKVIMLAQEEARRLGHN+
Sbjct: 61 MFRPGQDFHSKVAIAISSRRG--GRPSRGVPRAMFERFTEKAIKVIMLAQEEARRLGHNF 118
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
+G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 119 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 159
>gi|18423214|ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
Precursor
gi|9758239|dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis
thaliana]
gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana]
gi|110742601|dbj|BAE99213.1| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008628|gb|AED96011.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
Length = 929
Score = 1390 bits (3598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/771 (91%), Positives = 738/771 (95%), Gaps = 7/771 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 161 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 218
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E V A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 219 NLGADPSNIRTQVIRMVGENNE-VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVV 277
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLD
Sbjct: 278 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLD 337
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 338 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 397
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 398 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 457
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDE+LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKELRQI
Sbjct: 458 LRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQI 517
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAG LRDRE++L+A++SA+ KGKEMSKAE+E G+ GP+VTE DIQ
Sbjct: 518 TKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQ 577
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLHKR+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 578 HIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRP 637
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 638 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 697
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 698 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 757
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 758 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 817
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADI+LKEVF+RLK K+IELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 818 TKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLE 877
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVD++GNVTVLNG SG P E D LPV
Sbjct: 878 DSMAEKMLAREIKEGDSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 116/160 (72%), Gaps = 8/160 (5%)
Query: 3 RLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMM-SYMQPSASRISSFSGLRRSNALDTF 61
R+LAQ T P+L R+ S+ +G+SRR+VKMM S +Q S R+ F GLR +NALDT
Sbjct: 6 RVLAQST-PPSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDTL 64
Query: 62 ---TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYI 118
DFHS V +++ +GK+ R F VKAMFERFTEKAIKVIMLAQEEARRLGHN++
Sbjct: 65 GKSRQDFHSKVRQAMNVPKGKASR---FTVKAMFERFTEKAIKVIMLAQEEARRLGHNFV 121
Query: 119 GSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 122 GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 161
>gi|356513459|ref|XP_003525431.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 1390 bits (3598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/768 (91%), Positives = 736/768 (95%), Gaps = 3/768 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ + EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 154 GRGSGFV--AVEIPFTPRAKRVLEFSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 211
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NLGADP+NIR QVIRMVGE ++VGA VG GSS N KMPTLEEYGTNLTKLAEEGKLDPV
Sbjct: 212 NLGADPNNIRAQVIRMVGEGADSVGATVGPGSSNNNKMPTLEEYGTNLTKLAEEGKLDPV 271
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITL
Sbjct: 272 VGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITL 331
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 332 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 391
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHH
Sbjct: 392 ALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHH 451
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KLRYTD+ALV+AAQLS+QYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQ
Sbjct: 452 KLRYTDDALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQ 511
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I KEK E VR QDFEKAGELRDREMDLKAQISAL++KGKEMSKAE+EAGD GP+VTEVDI
Sbjct: 512 IVKEKEEFVRNQDFEKAGELRDREMDLKAQISALIEKGKEMSKAESEAGDEGPMVTEVDI 571
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
QHIVS+WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR
Sbjct: 572 QHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 631
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 632 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 691
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM
Sbjct: 692 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 751
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ
Sbjct: 752 TSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 811
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTKLEVKEIADIMLKEVFDRLK K+I+L VTERFRERVV+EGYNPSYGARPLRRAIMRLL
Sbjct: 812 LTKLEVKEIADIMLKEVFDRLKAKEIDLSVTERFRERVVDEGYNPSYGARPLRRAIMRLL 871
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
EDSMAEKMLAREIKEGDSVIVD DSDGNV VLNGSSGAP+SL + LPV
Sbjct: 872 EDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSSGAPDSLEEALPV 919
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 118/161 (73%), Gaps = 4/161 (2%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR+L Q T P L+ G RH + + +GKS+R+VKMMS ++ A R+SSFSGLR N +D+
Sbjct: 1 MARVLVQSTGMPGLLSGQRHGKHKGSGKSKRSVKMMSTLRMPALRMSSFSGLRTLNPMDS 60
Query: 61 FTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGS 120
+ H T ++ +SRR ++ R V KAMFERFTEKAIKVIMLAQEEARRLGHN++G+
Sbjct: 61 LSRPRH-TFPLNTTSRRERAKRC---VPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 116
Query: 121 EHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 117 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 157
>gi|399212|sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic; Flags: Precursor
gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A) [Solanum lycopersicum]
Length = 926
Score = 1390 bits (3597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/769 (91%), Positives = 736/769 (95%), Gaps = 4/769 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GF+ A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 160 GRGSGFI--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 217
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP+NIRTQVIRMVGES+EAVGA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 218 NLGADPTNIRTQVIRMVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVV 277
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 278 GRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 337
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 338 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 397
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK
Sbjct: 398 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 457
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L YTDEA+ +AA+LS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI
Sbjct: 458 LHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 517
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDI 499
TKEKNEAVRGQDFEKAGELRDREMDLKAQISAL+DK KE SKAE+EAGD GP+VTE DI
Sbjct: 518 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADI 577
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
QHIVS+WTGIPVEKVSTDESDRLLKMEETLH RVIGQDEAVKAISRAIRRARVGLKNPNR
Sbjct: 578 QHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNR 637
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGKSELAK+LA YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 638 PIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 697
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM
Sbjct: 698 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 757
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQ
Sbjct: 758 TSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQ 817
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTKLEVKEIADIMLKEVF RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLL
Sbjct: 818 LTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLL 877
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
EDSMAEKMLA EIKEGDSVIVDVDSDGNVTVLNG+SGAP A P P++
Sbjct: 878 EDSMAEKMLAGEIKEGDSVIVDVDSDGNVTVLNGTSGAPSDSA-PEPIL 925
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR L Q TN V G R Q + K +R V+M+ ++ +SR+++F+GLR NALDT
Sbjct: 2 MARALVQSTNILPSVAGERAGQFNGSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALDT 61
Query: 61 FTCD----FHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHN 116
HS VA + RR + R FV KAMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 62 LLVKSGETLHSKVAAATFVRRPRGCR---FVPKAMFERFTEKAIKVIMLAQEEARRLGHN 118
Query: 117 YIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 119 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 163
>gi|461753|sp|P35100.1|CLPC_PEA RecName: Full=Chaperone protein ClpC, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog; AltName: Full=Casein lytic proteinase C; Flags:
Precursor
gi|169128|gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum]
Length = 922
Score = 1389 bits (3594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/767 (91%), Positives = 734/767 (95%), Gaps = 2/767 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+QEEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 158 GRGSGFV--AVEIPFTPRAKRVLELSQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 215
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP+NIRTQVIRMVGES ++V A VG GSS NK PTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 216 NLGADPTNIRTQVIRMVGESADSVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVV 275
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 276 GRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 335
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 336 MGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPA 395
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDP LERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 396 LARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 455
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEAL++AAQLSYQYISDRFLPDKAIDL+DEAGSRVRL+HAQLPEEA+EL+KE+R+I
Sbjct: 456 LRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEEAKELDKEVRKI 515
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK E VR QDFEKAGELRD+EMDLKAQISAL++KGKEMSKAETE D GP+VTEVDIQ
Sbjct: 516 VKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQ 575
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPV+KVS DESDRLLKME+TLHKR+IGQDEAV+AISRAIRRARVGLKNPNRP
Sbjct: 576 HIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKNPNRP 635
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 636 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 695
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 696 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 755
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 756 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 815
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF RLKTK+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 816 TKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 875
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVDSDG V VLNGSSG PESL + L +
Sbjct: 876 DSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSGTPESLPEALSI 922
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 118/161 (73%), Gaps = 6/161 (3%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR+LAQ + P LV G + Q + +GKS+R+VK M ++ S R+S FSGLR N L+T
Sbjct: 1 MARVLAQSLSVPGLVAGHKDSQHKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLNT 60
Query: 61 FT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
DFHS V+ ++SSRR ++ R F+ +AMFERFTEKAIKVIMLAQEEARRLGHN+
Sbjct: 61 MMRPGLDFHSKVSKAVSSRRARAKR---FIPRAMFERFTEKAIKVIMLAQEEARRLGHNF 117
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
+G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 118 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 158
>gi|399213|sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic; Flags: Precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
Length = 923
Score = 1387 bits (3591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/768 (92%), Positives = 739/768 (96%), Gaps = 3/768 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 158 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 215
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGES EAVGA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 216 NLGADPSNIRTQVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVV 275
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 276 GRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 335
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 336 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 395
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 396 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 455
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDE LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA+ELEKELRQI
Sbjct: 456 LRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQI 515
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRDREMDLKAQI+AL+DK KE+SKAE+EA D GP+VTE DIQ
Sbjct: 516 TKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQ 575
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 576 HIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRP 635
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 636 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 695
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 696 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 755
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLD DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 756 SNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 815
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF+RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 816 TKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 875
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA-DPLPV 847
DSMAEKMLA EIKEGDSVIVDVDSDGNVTVLNGSSG P A +P+PV
Sbjct: 876 DSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGTPSDPAPEPIPV 923
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR L Q T+ P+ V G R + +GK++R V M+ Q S+ + F+GLR NA+DT
Sbjct: 1 MARALVQSTSIPSSVAGERTTKFNGSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAIDT 60
Query: 61 FTCD---FHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
S VA + RR + R FV KAMFERFTEKAIKVIMLAQEEARRLGHN+
Sbjct: 61 LVRSGETLQSKVAAATYVRRPRGCR---FVPKAMFERFTEKAIKVIMLAQEEARRLGHNF 117
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
+G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 118 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 158
>gi|297795893|ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
gi|297311666|gb|EFH42090.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
Length = 929
Score = 1387 bits (3591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/771 (91%), Positives = 738/771 (95%), Gaps = 7/771 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 161 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 218
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E V A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 219 NLGADPSNIRTQVIRMVGENNE-VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVV 277
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLD
Sbjct: 278 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLD 337
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 338 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 397
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 398 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 457
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD++LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKELRQI
Sbjct: 458 LRYTDDSLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQI 517
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAG LRDRE++L+A++SA+ KGKEMSKAE+E G+ GP+VTE DIQ
Sbjct: 518 TKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQ 577
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLHKR+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 578 HIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRP 637
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 638 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 697
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 698 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 757
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 758 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 817
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADI+LKEVF+RLK K+IELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 818 TKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLE 877
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVD++GNVTVLNG SG P E D LPV
Sbjct: 878 DSMAEKMLAREIKEGDSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 116/160 (72%), Gaps = 8/160 (5%)
Query: 3 RLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMM-SYMQPSASRISSFSGLRRSNALDTF 61
R+LAQ T P+L R+ S+ +G+SRR+VKMM S +Q S R+ F GLR +NALDT
Sbjct: 6 RVLAQST-PPSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFLGLRGNNALDTL 64
Query: 62 ---TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYI 118
DFHS V +++ +GK+ R F VKAMFERFTEKAIKVIMLAQEEARRLGHN++
Sbjct: 65 GKNRQDFHSKVRQAMNVPKGKASR---FTVKAMFERFTEKAIKVIMLAQEEARRLGHNFV 121
Query: 119 GSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 122 GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 161
>gi|307136002|gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
Length = 929
Score = 1387 bits (3590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/773 (93%), Positives = 743/773 (96%), Gaps = 8/773 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 159 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 216
Query: 141 NLGA------DPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
NLG N+ QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG
Sbjct: 217 NLGKLFIFNLMFYNLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 276
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGK
Sbjct: 277 KLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGK 336
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA
Sbjct: 337 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 396
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
NILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER
Sbjct: 397 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 456
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YEIHHKLRYTDEALV+AAQLSYQYISDRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELE
Sbjct: 457 YEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELE 516
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVV 494
KELRQITKEKNEAVR QDFEKAGELRDREM+LK +ISALVDKGKEMSKAE+EAGDVGPVV
Sbjct: 517 KELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVV 576
Query: 495 TEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGL 554
TEVDIQHIVS+WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGL
Sbjct: 577 TEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGL 636
Query: 555 KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 614
KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP
Sbjct: 637 KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 696
Query: 615 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 674
GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN
Sbjct: 697 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 756
Query: 675 TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 734
TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM
Sbjct: 757 TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 816
Query: 735 IVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRA 794
IVFRQLTKLEVKEIADIMLKEVFDRLK K+I+LQVTERFR+RVVEEGYNPSYGARPLRRA
Sbjct: 817 IVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVEEGYNPSYGARPLRRA 876
Query: 795 IMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
IMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESL D +PV
Sbjct: 877 IMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLPDAIPV 929
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 1 MARLLAQLTNAPALVPGGRH-FQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALD 59
MAR+L Q TN P LV G ++ S+ + +R VKMM+ RI +FSGLR N+LD
Sbjct: 1 MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60
Query: 60 TFT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHN 116
DFHS +A+++SSRR K+ R V +AMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 61 NMLRSGQDFHSKMAITISSRRRKASRC---VPRAMFERFTEKAIKVIMLAQEEARRLGHN 117
Query: 117 YIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 118 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 162
>gi|118488171|gb|ABK95905.1| unknown [Populus trichocarpa]
Length = 835
Score = 1387 bits (3589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/769 (91%), Positives = 742/769 (96%), Gaps = 4/769 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAV-GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLGADPSNIRTQVIRMVGESTE + G+ VG GSS NKMPTLEEYGTNLTKLAEEGKLDPV
Sbjct: 126 NLGADPSNIRTQVIRMVGESTENLAGSTVGPGSSNNKMPTLEEYGTNLTKLAEEGKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQPQIERV+QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITL
Sbjct: 186 VGRQPQIERVIQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI+LFIDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIMLFIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KLRYTDE+LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEKE+RQ
Sbjct: 366 KLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKEVRQ 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
ITKEK+EAVRGQDFEKAGELRDREMDL+AQI+A+V+KGKEMSKAETEAGDVGP VTE DI
Sbjct: 426 ITKEKDEAVRGQDFEKAGELRDREMDLRAQIAAIVEKGKEMSKAETEAGDVGPTVTESDI 485
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
QHIVS+WTGIPVEKVSTDESDRLLKME+TLHKRV+GQDEAVKAISRAIRRARVGLKNPNR
Sbjct: 486 QHIVSSWTGIPVEKVSTDESDRLLKMEDTLHKRVVGQDEAVKAISRAIRRARVGLKNPNR 545
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE+MERHTV+KLIGSPPGYVGY
Sbjct: 546 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEYMERHTVAKLIGSPPGYVGY 605
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN+MLQILEDGRLTDSKGRTVDFKNTLLIM
Sbjct: 606 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNIMLQILEDGRLTDSKGRTVDFKNTLLIM 665
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ
Sbjct: 666 TSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 725
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTKLEVK+IADIMLKEVF+RLK K+IELQVTERF +RVV+EGYNP+YGARPLRRAIMRLL
Sbjct: 726 LTKLEVKDIADIMLKEVFERLKAKEIELQVTERFIDRVVDEGYNPAYGARPLRRAIMRLL 785
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS-GAPESLADPLPV 847
EDSMAEKML+ EIKEGDSVI+DVDSDGNV VLNG S GAP++L D L V
Sbjct: 786 EDSMAEKMLSAEIKEGDSVIIDVDSDGNVIVLNGQSGGAPDALPDVLNV 834
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|357520587|ref|XP_003630582.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
gi|355524604|gb|AET05058.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
Length = 926
Score = 1385 bits (3585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/767 (91%), Positives = 736/767 (95%), Gaps = 2/767 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 162 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 219
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP+NIRTQVIRMVGE ++VGA VG GSS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 220 NLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVV 279
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 280 GRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 339
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 340 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 399
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+V ETIQILKGLRERYEIHHK
Sbjct: 400 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHK 459
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AA+LS+QYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAR LEKE+RQI
Sbjct: 460 LRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQI 519
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+EAVR Q+FEKAGELRD+EMDLK QISAL++K KEM+KAE+EAGDVG +VTEVDIQ
Sbjct: 520 VKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQ 579
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTGIPV+KVS DESDRLLKME+TLHKR+IGQ EAV+AISRAIRRARVGLKNPNRP
Sbjct: 580 HIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRP 639
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 640 IASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 699
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 700 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 759
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 760 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 819
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF+RLKTK+IEL VTERFRERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 820 TKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLE 879
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
DSMAEKMLAREIKEGDSVIVD DSDGNV VLNGS+GAP+SL D LPV
Sbjct: 880 DSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTGAPDSLPDALPV 926
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 116/165 (70%), Gaps = 4/165 (2%)
Query: 1 MARLLAQLTNAPALVPGGRHFQS-QNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALD 59
M+R LAQ N P LV G RH + + A +SRR+V+MM + ++ R+SS+SGLR N+LD
Sbjct: 1 MSRALAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTASPRLSSYSGLRTLNSLD 60
Query: 60 TFT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHN 116
+ DFHS V + + R K GR V KAMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 61 SMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHN 120
Query: 117 YIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 121 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 165
>gi|449440498|ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 929
Score = 1383 bits (3579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/773 (93%), Positives = 742/773 (95%), Gaps = 8/773 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 159 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 216
Query: 141 NLGA------DPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
NLG + QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG
Sbjct: 217 NLGKLFIFNLMFYKLSKQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 276
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGK
Sbjct: 277 KLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGK 336
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA
Sbjct: 337 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 396
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
NILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER
Sbjct: 397 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 456
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YEIHHKLRYTDEALV+AAQLSYQYISDRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELE
Sbjct: 457 YEIHHKLRYTDEALVAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELE 516
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVV 494
KELRQITKEKNEAVR QDFEKAGELRDREM+LK +ISALVDKGKEMSKAE+EAGDVGPVV
Sbjct: 517 KELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVV 576
Query: 495 TEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGL 554
TEVDIQHIVS+WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAV+AISRAIRRARVGL
Sbjct: 577 TEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGL 636
Query: 555 KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 614
KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP
Sbjct: 637 KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 696
Query: 615 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 674
GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN
Sbjct: 697 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 756
Query: 675 TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 734
TLLIMTSNVGSSVIEKGGRR+GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM
Sbjct: 757 TLLIMTSNVGSSVIEKGGRRMGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 816
Query: 735 IVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRA 794
IVFRQLTKLEVKEIADIMLKEVFDRLK K+I+LQVTERFR+RVVEEGYNPSYGARPLRRA
Sbjct: 817 IVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVEEGYNPSYGARPLRRA 876
Query: 795 IMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
IMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESL D +PV
Sbjct: 877 IMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLPDAIPV 929
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 114/165 (69%), Gaps = 7/165 (4%)
Query: 1 MARLLAQLTNAPALVPGGRH-FQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALD 59
MAR+L Q TN P LV G ++ ++ + +R VKMMS RI +FSGLR N+LD
Sbjct: 1 MARVLVQSTNIPGLVGGRKNGLTTRGSANVKRAVKMMSTAHSPGLRIRNFSGLRGFNSLD 60
Query: 60 TFT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHN 116
+FHS VA ++SSRR K+ R V +AMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 61 NMLRSRQNFHSKVATAISSRRRKASRC---VPRAMFERFTEKAIKVIMLAQEEARRLGHN 117
Query: 117 YIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 118 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 162
>gi|147866973|emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera]
Length = 890
Score = 1381 bits (3574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/768 (93%), Positives = 741/768 (96%), Gaps = 10/768 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 132 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 189
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQ +++AVGAGVGGG++GNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 190 NLGADPSNIRTQ-------ASKAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVV 242
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 243 GRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 302
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 303 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 362
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI KGLRERYEIHHK
Sbjct: 363 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQIXKGLRERYEIHHK 422
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALVSAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI
Sbjct: 423 LRYTDEALVSAARLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 482
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVR QDFEKAGELRDREMDLKAQIS L+DKGKEM+KAETEAGD+GP+VTEVDIQ
Sbjct: 483 TKEKNEAVRSQDFEKAGELRDREMDLKAQISTLIDKGKEMTKAETEAGDIGPMVTEVDIQ 542
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVSAWTGIPVEKVSTDESDRLLKMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 543 HIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRP 602
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 603 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 662
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 663 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 722
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 723 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 782
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVK+IADIMLKEVF+RLK KDIELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 783 TKLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 842
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA-PESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA PESL + +PV
Sbjct: 843 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPPESLPEAMPV 890
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 26/158 (16%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR L Q TN A V G+H + Q + +++++VKMM NA+ +
Sbjct: 1 MARALVQSTNIFASVADGKHGKFQGSERTKKSVKMMC------------------NAMIS 42
Query: 61 FTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGS 120
++ V + G+A V +AMFERFTEKAIKVIMLAQEEARRLGHN++G+
Sbjct: 43 IP-EWQLLFLV-------RGGKASRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 94
Query: 121 EHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 95 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 132
>gi|356527573|ref|XP_003532383.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 1379 bits (3569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/766 (91%), Positives = 734/766 (95%), Gaps = 3/766 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 154 GRGSGFV--AVEIPFTSRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 211
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NL ADP+NIR QVIRMVGE ++VGA VG GSS N KMPTLEEYGTNLTKLAEEGKLDPV
Sbjct: 212 NLAADPNNIRAQVIRMVGEGADSVGATVGPGSSNNNKMPTLEEYGTNLTKLAEEGKLDPV 271
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
+GRQPQIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITL
Sbjct: 272 MGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITL 331
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 332 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 391
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+V+ETIQILKGLRERYEIHH
Sbjct: 392 ALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVNETIQILKGLRERYEIHH 451
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL YTD+ALV+AAQLS+QYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEAREL+KE+RQ
Sbjct: 452 KLHYTDDALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARELDKEVRQ 511
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I KEK E+VR QDFEKAGELRD+EMDLKAQISAL++KGKEMSKAE+EAGD GP+VTEVDI
Sbjct: 512 IVKEKEESVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAESEAGDEGPMVTEVDI 571
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
QHIVS+WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR
Sbjct: 572 QHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 631
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 632 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 691
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM
Sbjct: 692 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 751
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ
Sbjct: 752 TSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 811
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTKLEVKEIADIMLKEVF RLK K+I+L VTERFRERVV+EGYNPSYGARPLRRAIM+LL
Sbjct: 812 LTKLEVKEIADIMLKEVFQRLKAKEIDLSVTERFRERVVDEGYNPSYGARPLRRAIMQLL 871
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
EDSMAEKMLAREIKEGDSVIVD DS+GNV VLNGSSGAP+SL D L
Sbjct: 872 EDSMAEKMLAREIKEGDSVIVDSDSEGNVIVLNGSSGAPDSLEDVL 917
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 117/158 (74%), Gaps = 4/158 (2%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR+LAQ T P L+ G RH + +GK++R+VKMMS ++ A R+SSFSGLR N LD+
Sbjct: 1 MARVLAQSTGMPGLLSGRRHGPHKGSGKTKRSVKMMSTLRIPALRMSSFSGLRTLNPLDS 60
Query: 61 FTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGS 120
+ H T ++ +SRR ++ R V KAMFERFTEKAIKVIMLAQEEARRLGHN++G+
Sbjct: 61 VSRPRH-TFPLTTTSRRERAKRC---VPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 116
Query: 121 EHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 117 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 154
>gi|2921158|gb|AAC04687.1| ClpC [Arabidopsis thaliana]
Length = 928
Score = 1377 bits (3564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/771 (90%), Positives = 733/771 (95%), Gaps = 7/771 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ E R+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 160 GRGSGFV--AVEIPFTPRAKRVLELSLEATRQLGHNYIGSEHLLLGLLREGEGVAARVLE 217
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E V A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 218 NLGADPSNIRTQVIRMVGENNE-VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVV 276
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGKKVITLD
Sbjct: 277 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLD 336
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 337 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 396
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 397 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 456
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDE+LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEE RELEKELRQI
Sbjct: 457 LRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEVRELEKELRQI 516
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAG LRDRE++L+A++SA+ KGKEMSKAE+E G+ GP+VTE DIQ
Sbjct: 517 TKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQ 576
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKMEETLHKR+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 577 HIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRP 636
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS LIGS PGYVGYT
Sbjct: 637 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSTLIGSLPGYVGYT 696
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 697 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 756
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 757 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 816
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADI+LKEVF+RLK K+IELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 817 TKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLE 876
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 847
DSMAEKMLAREIKEGDSVIVDVD++GNVTVLNG SG P E D LPV
Sbjct: 877 DSMAEKMLAREIKEGDSVIVDVDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 927
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 112/159 (70%), Gaps = 7/159 (4%)
Query: 3 RLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTF- 61
R+LAQ T P+L R+ S+ +G+SRR+VKMM + + F GLR +NALDT
Sbjct: 6 RVLAQST-PPSLACYQRNVPSRGSGRSRRSVKMMCIIFNVWLPMQGFMGLRGNNALDTLG 64
Query: 62 --TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIG 119
DFHS V +++ +GK+ R F VKAMFERFTEKAIKVIMLAQEEARRLGHN++G
Sbjct: 65 KSRQDFHSKVRQAMNVPKGKASR---FTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 121
Query: 120 SEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 122 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 160
>gi|224136316|ref|XP_002322299.1| predicted protein [Populus trichocarpa]
gi|222869295|gb|EEF06426.1| predicted protein [Populus trichocarpa]
Length = 932
Score = 1369 bits (3543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/775 (89%), Positives = 734/775 (94%), Gaps = 10/775 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 159 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 216
Query: 141 NLGADPSNIRTQVIRMVGESTEA-------VGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
NLGADPSNIRTQ E + G+ VG GSS NKMPTLEEYGTNLTKLAEE
Sbjct: 217 NLGADPSNIRTQASNASFELCQPNFLTENLAGSTVGPGSSNNKMPTLEEYGTNLTKLAEE 276
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGRQPQIERV+QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEG
Sbjct: 277 GKLDPVVGRQPQIERVIQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEG 336
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEI+LFIDEVHTLIGAGAAEGAIDA
Sbjct: 337 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIMLFIDEVHTLIGAGAAEGAIDA 396
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
ANILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE
Sbjct: 397 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 456
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYEIHHKLRYTDE+LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL
Sbjct: 457 RYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEAREL 516
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
EKE+RQITKEK+EAVRGQDFEKAGELRDREMDL+AQI+A+V+KGKEMSKAETEAGDVGP
Sbjct: 517 EKEVRQITKEKDEAVRGQDFEKAGELRDREMDLRAQIAAIVEKGKEMSKAETEAGDVGPT 576
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
VTE DIQHIVS+WTGIPVEKVSTDESDRLLKME+TLHKRV+GQDEAVKAISRAIRRARVG
Sbjct: 577 VTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEDTLHKRVVGQDEAVKAISRAIRRARVG 636
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE+MERHTV+KLIGSP
Sbjct: 637 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEYMERHTVAKLIGSP 696
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN+MLQILEDGRLTDSKGRTVDFK
Sbjct: 697 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNIMLQILEDGRLTDSKGRTVDFK 756
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 733
NTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE
Sbjct: 757 NTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 816
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
MIVFRQLTKLEVK+IADIMLKEVF+RLK K+IELQVTERFR+RVV+EGYNP+YGARPLRR
Sbjct: 817 MIVFRQLTKLEVKDIADIMLKEVFERLKAKEIELQVTERFRDRVVDEGYNPAYGARPLRR 876
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS-GAPESLADPLPV 847
AIMRLLEDSMAEKML+ EIKEGDSVI+DVDSDGNV VLNG S GAP++L D L V
Sbjct: 877 AIMRLLEDSMAEKMLSAEIKEGDSVIIDVDSDGNVIVLNGQSGGAPDALPDVLNV 931
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 111/162 (68%), Gaps = 7/162 (4%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSR-RNVKMMSYMQPSASRISSFSGLRRSNALD 59
MARLL N PA+ P RH Q + + K R + +MMS +S +SGLR +N LD
Sbjct: 1 MARLLVHSANIPAVAPCLRHCQFEESKKRRDSSARMMSSSPSQGLVMSGYSGLRSANCLD 60
Query: 60 TFT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHN 116
T FHS VA+++S R+ K+ R FV +AMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 61 TLLRHGQSFHSKVAITISPRQQKAKR---FVPRAMFERFTEKAIKVIMLAQEEARRLGHN 117
Query: 117 YIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 118 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 159
>gi|218186618|gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
Length = 1412
Score = 1354 bits (3505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/764 (90%), Positives = 738/764 (96%), Gaps = 3/764 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 648 GRGNGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 705
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADPSNIRTQVIRM+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 706 SLGADPSNIRTQVIRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 765
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 766 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLD 825
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 826 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 885
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEP+VDETI+IL+GLRERYEIHHK
Sbjct: 886 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIHHK 945
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL+SAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QI
Sbjct: 946 LRYTDDALISAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQI 1005
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVR QDFEKAGELRDREM+LKAQI+AL+DK KEMSKAETE+G+ GP+V E DIQ
Sbjct: 1006 TKDKNEAVRSQDFEKAGELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQ 1065
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESD+LLKMEETLH+RVIGQDEAVKAISR+IRRARVGLKNPNRP
Sbjct: 1066 HIVSSWTGIPVEKVSSDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRP 1125
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIF+GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 1126 IASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 1185
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 1186 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 1245
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL
Sbjct: 1246 SNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQL 1305
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIA+IMLKEVFDRLK KDI+LQVTE+F+ER+V+EG+NPSYGARPLRRAIMRLLE
Sbjct: 1306 TKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLE 1365
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
DS+AEKMLA E+KEGDS IVDVDS+G V VLNG SG PE L+ P
Sbjct: 1366 DSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGQSGLPE-LSTP 1408
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 92/138 (66%), Gaps = 5/138 (3%)
Query: 22 QSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALD-TFTCDFHSTVAVSLSSRRGKS 80
Q + +RR M++ ++++F GLR ++ T +F STVA S R ++
Sbjct: 515 QRWKSHGTRRPPSMLAMSLSRPVKMAAFVGLRSVHSFSVTPVTNFRSTVASYRSRRGRRA 574
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
FV ++MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+
Sbjct: 575 R----FVTRSMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLK 630
Query: 141 NLGADPSNIRTQVIRMVG 158
++G + + R +V +++G
Sbjct: 631 SMGINLKDARVEVEKIIG 648
>gi|347602486|sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
Flags: Precursor
Length = 918
Score = 1354 bits (3504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/767 (90%), Positives = 738/767 (96%), Gaps = 2/767 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 154 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 211
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 212 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 271
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 272 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLD 331
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 332 MGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPA 391
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 392 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 451
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD++L++AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+
Sbjct: 452 LRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQV 511
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQ
Sbjct: 512 TKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQ 571
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 572 HIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRP 631
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 632 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 691
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 692 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 751
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 752 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 811
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 812 TKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLE 871
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
DS+AEKMLA E+KEGDS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 872 DSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 918
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 6/137 (4%)
Query: 28 KSRRNVKMMSYMQPSASRISSFSGLRRSNALDTFTC---DFHSTVAVSLSSRRGKSGRAG 84
+ R MM M + F GLR++N LD+ + DF S VA +S RG R
Sbjct: 24 RVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRG- 82
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
VV+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G
Sbjct: 83 --VVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGI 140
Query: 145 DPSNIRTQVIRMVGEST 161
+ + R +V +++G +
Sbjct: 141 NLKDARVEVEKIIGRGS 157
>gi|38347158|emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]
Length = 888
Score = 1353 bits (3502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/767 (90%), Positives = 738/767 (96%), Gaps = 2/767 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 124 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 181
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 182 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 241
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 242 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLD 301
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 302 MGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPA 361
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 362 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 421
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD++L++AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+
Sbjct: 422 LRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQV 481
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQ
Sbjct: 482 TKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQ 541
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 542 HIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRP 601
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 602 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 661
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 662 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 721
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 722 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 781
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 782 TKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLE 841
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
DS+AEKMLA E+KEGDS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 842 DSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 888
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 89/130 (68%), Gaps = 6/130 (4%)
Query: 35 MMSYMQPSASRISSFSGLRRSNALDTFTC---DFHSTVAVSLSSRRGKSGRAGGFVVKAM 91
MM M + F GLR++N LD+ + DF S VA +S RG R VV+AM
Sbjct: 1 MMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRG---VVRAM 57
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
FERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + + R
Sbjct: 58 FERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARV 117
Query: 152 QVIRMVGEST 161
+V +++G +
Sbjct: 118 EVEKIIGRGS 127
>gi|125590233|gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japonica Group]
Length = 1033
Score = 1352 bits (3500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/767 (90%), Positives = 738/767 (96%), Gaps = 2/767 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 269 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 326
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 327 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 386
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 387 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLD 446
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 447 MGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPA 506
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 507 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 566
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD++L++AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+
Sbjct: 567 LRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQV 626
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQ
Sbjct: 627 TKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQ 686
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 687 HIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRP 746
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 747 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 806
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 807 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 866
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 867 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 926
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK KDI+LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 927 TKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLE 986
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
DS+AEKMLA E+KEGDS IVDVDS+G V VLNG SG PE LA L V
Sbjct: 987 DSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 1033
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 6/137 (4%)
Query: 28 KSRRNVKMMSYMQPSASRISSFSGLRRSNALDTFTC---DFHSTVAVSLSSRRGKSGRAG 84
+ R MM M + F GLR++N LD+ + DF S VA +S RG R
Sbjct: 139 RVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRG- 197
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
VV+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G
Sbjct: 198 --VVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGI 255
Query: 145 DPSNIRTQVIRMVGEST 161
+ + R +V +++G +
Sbjct: 256 NLKDARVEVEKIIGRGS 272
>gi|413918180|gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]
Length = 921
Score = 1349 bits (3492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/765 (90%), Positives = 734/765 (95%), Gaps = 2/765 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 157 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 214
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 215 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 274
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 275 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLD 334
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+++IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAIDAANILKPA 394
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 395 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 454
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL++AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQI
Sbjct: 455 LRYTDDALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQI 514
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRDREM+LKAQI+A++DK KEM KAETE+GDVGP+VTE DIQ
Sbjct: 515 TKQKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMIKAETESGDVGPLVTEADIQ 574
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 575 HIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRP 634
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 635 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 694
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 695 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 754
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 755 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 814
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK K+I LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 815 TKLEVKEIADIMLKEVFDRLKAKEINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLE 874
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
DS+AEKMLA E+KEGDS IVDVDSDG V VLNG SG E L L
Sbjct: 875 DSLAEKMLAGEVKEGDSAIVDVDSDGKVIVLNGGSGVAEPLEPAL 919
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
Query: 27 GKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTFTC---DFHSTVAVSLSSRRGKSGRA 83
++R N M+ + F GLR++N LDT + DF S VA ++ RG + R
Sbjct: 26 ARARTNATMVRNTPTRTLTLGGFQGLRQTNFLDTRSVIKRDFGSIVASQIARPRGSASRG 85
Query: 84 GGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLG 143
VV+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+V++++G
Sbjct: 86 ---VVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVMKSMG 142
Query: 144 ADPSNIRTQVIRMVGEST 161
+ + R +V +++G +
Sbjct: 143 INLKDARVEVEKIIGRGS 160
>gi|357149204|ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 921
Score = 1348 bits (3489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/765 (90%), Positives = 736/765 (96%), Gaps = 2/765 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 157 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 214
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 215 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 274
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +GDVP+TIEGKKVITLD
Sbjct: 275 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRITNGDVPETIEGKKVITLD 334
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPA 394
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 395 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 454
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL++AA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+
Sbjct: 455 LRYTDDALIAAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQV 514
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRD+EM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQ
Sbjct: 515 TKDKNEAVRGQDFEKAGELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQ 574
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH+R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 575 HIVSSWTGIPVEKVSSDESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKNPNRP 634
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 635 IASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 694
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 695 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 754
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 755 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 814
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK K+I+LQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 815 TKLEVKEIADIMLKEVFDRLKVKEIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 874
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
DS+AEKMLA E+KEGDS IVDVDS+G V VLN SG PE +A L
Sbjct: 875 DSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNSGSGVPEPMAPVL 919
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 100/160 (62%), Gaps = 7/160 (4%)
Query: 5 LAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTFTC- 63
L Q P + G +++ R + S M+ + F GLRR+N LDT +
Sbjct: 5 LVQSAIVPTIYNSGAQVRARARATLVRAASVCS-MRTQTMTLGGFQGLRRANFLDTRSVV 63
Query: 64 --DFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSE 121
DF S VA L+ RGK R VV+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E
Sbjct: 64 RRDFGSIVASQLARPRGKGSR---MVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 120
Query: 122 HLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
+LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 121 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 160
>gi|115487910|ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=Casein lytic proteinase C2;
Flags: Precursor
gi|108862366|gb|ABA96309.2| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|108862367|gb|ABG21929.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648949|dbj|BAF29461.1| Os12g0230100 [Oryza sativa Japonica Group]
Length = 919
Score = 1348 bits (3488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/764 (90%), Positives = 738/764 (96%), Gaps = 3/764 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 155 GRGNGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 212
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADPSNIRTQVIRM+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 213 SLGADPSNIRTQVIRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 272
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 273 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLD 332
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 333 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 392
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEP+VDETI+IL+GLRERYEIHHK
Sbjct: 393 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIHHK 452
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL+SAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QI
Sbjct: 453 LRYTDDALISAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQI 512
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVR QDFEKAGELRDREM+LKAQI+AL+DK KEMSKAETE+G+ GP+V E DIQ
Sbjct: 513 TKDKNEAVRSQDFEKAGELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQ 572
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESD+LLKMEETLH+RVIGQDEAVKAISR+IRRARVGLKNPNRP
Sbjct: 573 HIVSSWTGIPVEKVSSDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRP 632
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIF+GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 633 IASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 692
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 693 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 752
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL
Sbjct: 753 SNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQL 812
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIA+IMLKEVFDRLK KDI+LQVTE+F+ER+V+EG+NPSYGARPLRRAIMRLLE
Sbjct: 813 TKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLE 872
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
DS+AEKMLA E+KEGDS IVDVDS+G V VLNG SG PE L+ P
Sbjct: 873 DSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGQSGLPE-LSTP 915
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 92/138 (66%), Gaps = 5/138 (3%)
Query: 22 QSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALD-TFTCDFHSTVAVSLSSRRGKS 80
Q + +RR M++ ++++F GLR ++ T +F STVA S R ++
Sbjct: 22 QRWKSHGTRRPPSMLAMSLSRPVKMAAFVGLRSVHSFSVTPVTNFRSTVASYRSRRGRRA 81
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
FV ++MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+
Sbjct: 82 R----FVTRSMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLK 137
Query: 141 NLGADPSNIRTQVIRMVG 158
++G + + R +V +++G
Sbjct: 138 SMGINLKDARVEVEKIIG 155
>gi|242075576|ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
gi|241938907|gb|EES12052.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
Length = 921
Score = 1347 bits (3486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/765 (90%), Positives = 733/765 (95%), Gaps = 2/765 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 157 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 214
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 215 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 274
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 275 GRRDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 334
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+++IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQNEDIILFIDEVHTLIGAGAAEGAIDAANILKPA 394
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 395 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 454
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL++AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQI
Sbjct: 455 LRYTDDALIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQI 514
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVR QDFEKAGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQ
Sbjct: 515 TKQKNEAVRSQDFEKAGELRDREMELKAQITAIIDKSKEMIKAETESGEVGPLVTEADIQ 574
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 575 HIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRP 634
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 635 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 694
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 695 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 754
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 755 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 814
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK KDI LQVTE+FR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 815 TKLEVKEIADIMLKEVFDRLKAKDINLQVTEKFRDRVVDEGYNPSYGARPLRRAIMRLLE 874
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
DS+AEKMLA E+KEGDS IVDVDSDG V VLNG SG E L L
Sbjct: 875 DSLAEKMLAGEVKEGDSAIVDVDSDGKVIVLNGGSGVAEPLEPAL 919
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 90/130 (69%), Gaps = 6/130 (4%)
Query: 32 NVKMMSYMQPSASRISSFSGLRRSNALDTFTC---DFHSTVAVSLSSRRGKSGRAGGFVV 88
N M+ M + F GLR++N LDT + DF S VA ++ RG + R VV
Sbjct: 31 NATMVRNMPARTLTLGGFQGLRQTNFLDTRSVIKRDFVSIVASQIARPRGSASRG---VV 87
Query: 89 KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + +
Sbjct: 88 RAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD 147
Query: 149 IRTQVIRMVG 158
R +V +++G
Sbjct: 148 ARVEVEKIIG 157
>gi|357149201|ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 879
Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/765 (89%), Positives = 734/765 (95%), Gaps = 2/765 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 115 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 172
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 173 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 232
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI +GDVP+TIEGKKVITLD
Sbjct: 233 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRITNGDVPETIEGKKVITLD 292
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 293 MGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPA 352
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 353 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 412
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL +AA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELR++
Sbjct: 413 LRYTDDALTAAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRKV 472
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRD+EM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQ
Sbjct: 473 TKDKNEAVRGQDFEKAGELRDKEMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQ 532
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH+R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 533 HIVSSWTGIPVEKVSSDESDRLLKMEETLHQRIIGQDEAVKAISRAIRRARVGLKNPNRP 592
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 593 IASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 652
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 653 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 712
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 713 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 772
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVFDRLK K+I+LQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 773 TKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 832
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
DS+AEKMLA E+KEGDS IVDVDS+G V VLN SG PE L L
Sbjct: 833 DSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNSGSGVPEPLTPAL 877
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 6/119 (5%)
Query: 46 ISSFSGLRRSNALDTFTC---DFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKV 102
+ F GLRR+N LDT + DF S VA L+ RGK R VV+AMFERFTEKAIKV
Sbjct: 3 LGGFQGLRRANFLDTRSVVRRDFGSIVAHQLARPRGKGSR---MVVRAMFERFTEKAIKV 59
Query: 103 IMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
IMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 60 IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 118
>gi|302763781|ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
gi|300167545|gb|EFJ34150.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
Length = 937
Score = 1339 bits (3466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/766 (89%), Positives = 727/766 (94%), Gaps = 2/766 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 170 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 227
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP NIRTQVIRMVGESTEAVGA VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 228 NLGADPGNIRTQVIRMVGESTEAVGASVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVV 287
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKV+TLD
Sbjct: 288 GRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVVTLD 347
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSD+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 348 MGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILVIDEVHTLIGAGAAEGAIDAANILKPA 407
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATT+DEYRKHIEKDPALERRFQPV VPEP+VDETIQILKGLRERYEIHHK
Sbjct: 408 LARGELQCIGATTIDEYRKHIEKDPALERRFQPVNVPEPTVDETIQILKGLRERYEIHHK 467
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR+L+KELRQI
Sbjct: 468 LRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARDLDKELRQI 527
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRDREM+LKAQISA+ +KGKE SKAETEAG+ GP+VTE DIQ
Sbjct: 528 TKEKNEAVRGQDFEKAGELRDREMELKAQISAITEKGKEKSKAETEAGETGPLVTEADIQ 587
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IVSAWTGIPVEKVSTDESDRL+KMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 588 QIVSAWTGIPVEKVSTDESDRLMKMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNRP 647
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 648 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYT 707
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 708 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 767
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGG IGF LDY EKDSSYNRIK+LV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 768 SNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQL 827
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVKEIADIMLKEVF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLE
Sbjct: 828 TKTEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLE 887
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLP 846
DSMAE+ML+ E+KEGDS I+DVDS+GNVTVLNG++G S + P
Sbjct: 888 DSMAERMLSGEVKEGDSAIIDVDSEGNVTVLNGTAGTASSSSIEAP 933
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 106/167 (63%), Gaps = 18/167 (10%)
Query: 8 LTNAPALVPGGRHF---QSQNAGKSRRNVKMM----SYMQPSASRIS------SFSGLRR 54
L+ +PAL G R + Q + ++RR M ++ Q A+ I+ ++ G+R+
Sbjct: 6 LSQSPALSAGIRSVPASRQQKSSRTRRGTVSMIRGSNHGQVRAAFITRTRTLQTYVGMRK 65
Query: 55 SNALD---TFTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEAR 111
+ LD T TC ++V S+S+ G+ G VV AMFERFTEKAIKVIMLAQEEAR
Sbjct: 66 PSPLDSLATSTCKDWNSVVSSVSTSGGRGASRG--VVVAMFERFTEKAIKVIMLAQEEAR 123
Query: 112 RLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
RLGHN++G+E +LLGL+ EG G+AA+VL+++G + R +V +++G
Sbjct: 124 RLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIG 170
>gi|293332601|ref|NP_001169540.1| uncharacterized protein LOC100383416 [Zea mays]
gi|224029989|gb|ACN34070.1| unknown [Zea mays]
gi|413916758|gb|AFW56690.1| cytokinin inducible protease1 [Zea mays]
Length = 921
Score = 1338 bits (3464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/764 (89%), Positives = 733/764 (95%), Gaps = 3/764 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 157 GRGNGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 214
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADPSNIRTQVIRM+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 215 SLGADPSNIRTQVIRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 274
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 275 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLD 334
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 394
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETI+IL+GLRERYEIHHK
Sbjct: 395 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIEILRGLRERYEIHHK 454
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEAL++AA+LSYQYISDRFLPDKAIDLIDEAGSRVRL+HAQ+PEEAREL+KEL+Q+
Sbjct: 455 LRYTDEALIAAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLQHAQVPEEARELDKELKQV 514
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVR QDFEKAGELRDREM+LKAQI+AL+DK KE+SKAE E+G+ GP+V E DIQ
Sbjct: 515 TKQKNEAVRSQDFEKAGELRDREMELKAQITALIDKSKELSKAEEESGETGPMVNEEDIQ 574
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESD+LLKMEETLHKRVIGQDEAV AISR+IRRARVGLKNPNRP
Sbjct: 575 HIVSSWTGIPVEKVSSDESDKLLKMEETLHKRVIGQDEAVVAISRSIRRARVGLKNPNRP 634
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIF+GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 635 IASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 694
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 695 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 754
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLD DEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL
Sbjct: 755 SNVGSSVIEKGGRKIGFDLDSDEKDSSYSRIKSLVIEEMKQYFRPEFLNRLDEMIVFRQL 814
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIML+EVFDRLK KDI LQVTE+F+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 815 TKLEVKEIADIMLQEVFDRLKAKDINLQVTEKFKERVVDEGYNPSYGARPLRRAIMRLLE 874
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
DS+AEKMLA E+KEGDS IVDVDS+G V VLNG G PE L+ P
Sbjct: 875 DSLAEKMLAGEVKEGDSAIVDVDSEGKVVVLNGQGGIPE-LSTP 917
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
Query: 17 GGR-HFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTFTCDFHSTVAVSLSS 75
GGR + +RR M++ ++S+F GLR ++ +S AV+
Sbjct: 16 GGRMRTHCWRSHGTRRPASMLAVSLSRPVKMSAFVGLRSVHSFSVTPTVSNSRSAVASYR 75
Query: 76 RRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVA 135
++ R+ FV +AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+A
Sbjct: 76 SSRQTRRSR-FVTQAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIA 134
Query: 136 ARVLENLGADPSNIRTQVIRMVG 158
A+VL+++G + + R +V +++G
Sbjct: 135 AKVLKSMGINLKDARVEVEKIIG 157
>gi|302790788|ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
gi|300155137|gb|EFJ21770.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
Length = 901
Score = 1336 bits (3457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/766 (89%), Positives = 727/766 (94%), Gaps = 2/766 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 134 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 191
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADP NIRTQVIRMVGESTEAVGA VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 192 NLGADPGNIRTQVIRMVGESTEAVGASVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVV 251
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKV+TLD
Sbjct: 252 GRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVVTLD 311
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSD+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 312 MGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILVIDEVHTLIGAGAAEGAIDAANILKPA 371
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATT+DEYRKHIEKDPALERRFQPV VPEP+VDETIQILKGLRERYEIHHK
Sbjct: 372 LARGELQCIGATTIDEYRKHIEKDPALERRFQPVNVPEPTVDETIQILKGLRERYEIHHK 431
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR+L+KELRQI
Sbjct: 432 LRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARDLDKELRQI 491
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRDREM+LKAQISA+ +KGKE SKAETEAG+ GP+VTE DIQ
Sbjct: 492 TKEKNEAVRGQDFEKAGELRDREMELKAQISAITEKGKEKSKAETEAGETGPLVTEADIQ 551
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IVSAWTGIPVEKVSTDESDRL+KMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 552 QIVSAWTGIPVEKVSTDESDRLMKMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNRP 611
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 612 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYT 671
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 672 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 731
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGG IGF LDY EKDSSYNRIK+LV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 732 SNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQL 791
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVKEIADIMLKEVF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLE
Sbjct: 792 TKTEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLE 851
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLP 846
DSMAE+ML+ E+KEGDS I+DVDS+GNVTVLNG++G S + P
Sbjct: 852 DSMAERMLSGEVKEGDSAIIDVDSEGNVTVLNGTAGTASSSSIEAP 897
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 84/116 (72%), Gaps = 5/116 (4%)
Query: 46 ISSFSGLRRSNALDTF---TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKV 102
+ ++ G+R+ + LD+ TC ++V S+S+ G+ G VV AMFERFTEKAIKV
Sbjct: 21 LQTYVGMRKPSPLDSLATRTCKDWNSVVSSVSTSGGRGASRG--VVVAMFERFTEKAIKV 78
Query: 103 IMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
IMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + R +V +++G
Sbjct: 79 IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIG 134
>gi|357160412|ref|XP_003578756.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 920
Score = 1335 bits (3456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/768 (88%), Positives = 735/768 (95%), Gaps = 5/768 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 156 GRGNGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 213
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADPSNIRTQV+RM+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 214 SLGADPSNIRTQVVRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 273
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI+SGDVP+TIEGKKVITLD
Sbjct: 274 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISSGDVPETIEGKKVITLD 333
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 334 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 393
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKH+EKDPALERRFQPVKVPEPSVDETI+IL+GL+ERYEIHHK
Sbjct: 394 LARGELQCIGATTLDEYRKHVEKDPALERRFQPVKVPEPSVDETIEILRGLQERYEIHHK 453
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL++AA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QI
Sbjct: 454 LRYTDDALIAAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQI 513
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRDREM+LKAQI+AL+DK KEM KAET++G+ GP+VTE DIQ
Sbjct: 514 TKDKNEAVRGQDFEKAGELRDREMELKAQITALIDKSKEMIKAETDSGETGPMVTEADIQ 573
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESD+LLKMEETLHKRVIGQDEAVKAISR++RRARVGLKNPNRP
Sbjct: 574 HIVSSWTGIPVEKVSTDESDKLLKMEETLHKRVIGQDEAVKAISRSVRRARVGLKNPNRP 633
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIF+GPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 634 IASFIFAGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 693
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPY+VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 694 EGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 753
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLD DEKDSSY RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL
Sbjct: 754 SNVGSSVIEKGGRKIGFDLDSDEKDSSYGRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQL 813
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVK+IA+IML EVF+RLK K+I LQVTE+F+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 814 TKLEVKDIAEIMLLEVFNRLKAKEINLQVTEKFKERVVDEGYNPSYGARPLRRAIMRLLE 873
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
DS+AEK+LA E+KEGDS IVDVDS+G V VLNG SG PE P P V
Sbjct: 874 DSLAEKILAGEVKEGDSAIVDVDSEGKVIVLNGESGLPEL---PTPAV 918
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 97/142 (68%), Gaps = 7/142 (4%)
Query: 18 GRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALD-TFTCDFHSTVAVSLSSR 76
G+ ++S +RR M++ R+++F GLR +++ T ++ STVA SS
Sbjct: 21 GQRWKSHG---TRRPASMLAMSLNRPVRMAAFVGLRSAHSFTATPASNYRSTVASYRSS- 76
Query: 77 RGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAA 136
+ GR FV +AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA
Sbjct: 77 --RRGRRTRFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAA 134
Query: 137 RVLENLGADPSNIRTQVIRMVG 158
+VL+++G + + R +V +++G
Sbjct: 135 KVLKSMGINLKDARVEVEKIIG 156
>gi|326514880|dbj|BAJ99801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 920
Score = 1330 bits (3443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/768 (88%), Positives = 734/768 (95%), Gaps = 5/768 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 156 GRGNGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 213
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADPSNIRTQV+RM+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 214 SLGADPSNIRTQVVRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 273
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 274 GREPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLD 333
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 334 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 393
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKH+EKDPALERRFQPVKVPEP+VDETI+IL+GLRERYEIHHK
Sbjct: 394 LARGELQCIGATTLDEYRKHVEKDPALERRFQPVKVPEPTVDETIEILRGLRERYEIHHK 453
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD++L++AA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QI
Sbjct: 454 LRYTDDSLIAAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQI 513
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRDREM+LKAQI+ L+DK KEM+KAETE+G+ GP+V E DIQ
Sbjct: 514 TKDKNEAVRGQDFEKAGELRDREMELKAQITTLIDKSKEMTKAETESGETGPMVNESDIQ 573
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESD+LLKMEETLHKRVIGQDEAVKAISR++RRARVGLK+PNRP
Sbjct: 574 HIVSSWTGIPVEKVSTDESDKLLKMEETLHKRVIGQDEAVKAISRSVRRARVGLKSPNRP 633
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIF+GPTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 634 IASFIFAGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 693
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPY+VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 694 EGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 753
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLD DEKDSSY RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL
Sbjct: 754 SNVGSSVIEKGGRKIGFDLDSDEKDSSYGRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQL 813
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIA+IML+EVF RLK+KDI LQVTE+F+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 814 TKLEVKEIANIMLQEVFTRLKSKDINLQVTEKFKERVVDEGYNPSYGARPLRRAIMRLLE 873
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
DS+AEK+L E+KEGDSVIVDVDS+G V VLNG SG PE P P V
Sbjct: 874 DSLAEKILGGEVKEGDSVIVDVDSEGKVIVLNGESGLPEL---PTPAV 918
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 98/143 (68%), Gaps = 7/143 (4%)
Query: 17 GGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTF-TCDFHSTVAVSLSS 75
GGRH++S +RR M++ R+++F GLR ++ + +F STVA S
Sbjct: 20 GGRHWKSHG---TRRTPSMLAMSLNRPVRMAAFVGLRSVHSFSAMRSSNFRSTVASYRFS 76
Query: 76 RRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVA 135
RRG R FV +AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+A
Sbjct: 77 RRG---RRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIA 133
Query: 136 ARVLENLGADPSNIRTQVIRMVG 158
A+VL+++G + + R +V +++G
Sbjct: 134 AKVLKSMGINLKDARVEVEKIIG 156
>gi|1168972|sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog, chloroplastic; Flags: Precursor
gi|406311|emb|CAA53077.1| clpA [Brassica napus]
Length = 874
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/771 (88%), Positives = 722/771 (93%), Gaps = 9/771 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 108 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 165
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E V A VGGGS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 166 NLGADPSNIRTQVIRMVGENNE-VTANVGGGSGTNKMPTLEEYGTNLTKLAEEGKLDPVV 224
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASG V +T EGKKVITLD
Sbjct: 225 GRHPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGVVRETSEGKKVITLD 284
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLL AGTKYRGEFEER+KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 285 MGLLAAGTKYRGEFEERVKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 344
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 345 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 404
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDE+LV+AAQLSYQYISDRFLPD+AIDL+DEAGSRVRLRHAQ+PEEARELEKELRQI
Sbjct: 405 LRYTDESLVAAAQLSYQYISDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQI 464
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKE NEAVRGQDFEKAG LRDRE++L+A++SA+ KGKEMSKAE+E GD GP+VTE DIQ
Sbjct: 465 TKE-NEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQ 523
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGI VEKVSTDESD LLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 524 HIVSSWTGILVEKVSTDESDLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 583
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIF GPTGVGKSELAKALAAYYFG EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 584 IASFIFFGPTGVGKSELAKALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 643
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
E QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT+SKGRTVDFKNTLLIMT
Sbjct: 644 EPPQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMT 703
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQL
Sbjct: 704 SNVGSSVIEKGGRRIGFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQL 762
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADI+L+E+F+RLK K++ELQVTERF+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 763 TKLEVKEIADILLQELFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLE 822
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP----ESLADPLPV 847
DSM EKMLAREIKEGDSVIVDVDS+G VTVLNG SG P E D LPV
Sbjct: 823 DSMEEKMLAREIKEGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 77/107 (71%), Gaps = 6/107 (5%)
Query: 55 SNALDTF---TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEAR 111
+N LDT F V +++ +GK R VVKAMFERFTEKAIKVIMLAQEEAR
Sbjct: 5 NNVLDTLGRSRQSFGGKVRQAMNVPKGKGSRG---VVKAMFERFTEKAIKVIMLAQEEAR 61
Query: 112 RLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
RLGHN++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 62 RLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 108
>gi|334185828|ref|NP_001190035.1| Clp ATPase [Arabidopsis thaliana]
gi|332644946|gb|AEE78467.1| Clp ATPase [Arabidopsis thaliana]
Length = 921
Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 671/774 (86%), Positives = 725/774 (93%), Gaps = 8/774 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 150 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 207
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 208 NLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVV 267
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLD
Sbjct: 268 GRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLD 327
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 328 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 387
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHK
Sbjct: 388 LARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHK 447
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK+LRQI
Sbjct: 448 LRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQI 507
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVR QDFE AG RDRE++LKA+I+ ++ +GKE++KAE EA + GP VTE DIQ
Sbjct: 508 TKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQ 567
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV+ WTGIPVEKVS+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 568 HIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRP 627
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 628 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 687
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 688 EGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 747
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 748 SNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 807
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEV RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLE
Sbjct: 808 TKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLE 867
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG------APESLADPLPVV 848
DSMAEKML+R+IKEGDSVIVDVD++G+V VL+G++G A E++ DP+P++
Sbjct: 868 DSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL 921
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 97/152 (63%), Gaps = 11/152 (7%)
Query: 10 NAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTF---TCDFH 66
AP L Q+ + R VKMMS +Q I SFSGLR +ALD + F
Sbjct: 7 KAPVL-----RIQATEYREPRGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFL 61
Query: 67 STVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLG 126
++ SS R K+ R V KAMFERFTEKAIKVIML+QEEARRLGHN++G+E +LLG
Sbjct: 62 VKYKLAKSSGREKASRC---VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLG 118
Query: 127 LLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
L+ EG G+AA+VL+++G + + R +V +++G
Sbjct: 119 LIGEGTGIAAKVLKSMGINLKDSRVEVEKIIG 150
>gi|186510816|ref|NP_566912.2| Clp ATPase [Arabidopsis thaliana]
gi|75213256|sp|Q9SXJ7.1|CLPC2_ARATH RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=AtClpC; AltName: Full=Casein
lytic proteinase C2; Flags: Precursor
gi|5360574|dbj|BAA82062.1| AtClpC [Arabidopsis thaliana]
gi|332644945|gb|AEE78466.1| Clp ATPase [Arabidopsis thaliana]
Length = 952
Score = 1318 bits (3412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 671/774 (86%), Positives = 725/774 (93%), Gaps = 8/774 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 181 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 238
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 239 NLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVV 298
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLD
Sbjct: 299 GRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLD 358
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 359 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 418
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHK
Sbjct: 419 LARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHK 478
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK+LRQI
Sbjct: 479 LRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQI 538
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVR QDFE AG RDRE++LKA+I+ ++ +GKE++KAE EA + GP VTE DIQ
Sbjct: 539 TKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQ 598
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV+ WTGIPVEKVS+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 599 HIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRP 658
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 659 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 718
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 719 EGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 778
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 779 SNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 838
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEV RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLE
Sbjct: 839 TKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLE 898
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG------APESLADPLPVV 848
DSMAEKML+R+IKEGDSVIVDVD++G+V VL+G++G A E++ DP+P++
Sbjct: 899 DSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL 952
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 94/141 (66%), Gaps = 6/141 (4%)
Query: 21 FQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTF---TCDFHSTVAVSLSSRR 77
Q+ + R VKMMS +Q I SFSGLR +ALD + F ++ SS R
Sbjct: 44 IQATEYREPRGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGR 103
Query: 78 GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAAR 137
K+ R V KAMFERFTEKAIKVIML+QEEARRLGHN++G+E +LLGL+ EG G+AA+
Sbjct: 104 EKASRC---VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAK 160
Query: 138 VLENLGADPSNIRTQVIRMVG 158
VL+++G + + R +V +++G
Sbjct: 161 VLKSMGINLKDSRVEVEKIIG 181
>gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana]
Length = 952
Score = 1317 bits (3408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/774 (86%), Positives = 725/774 (93%), Gaps = 8/774 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 181 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 238
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 239 NLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVV 298
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIER+VQIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLD
Sbjct: 299 GRQPQIERMVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLD 358
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 359 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 418
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHK
Sbjct: 419 LARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHK 478
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK+LRQI
Sbjct: 479 LRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQI 538
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVR QDFE AG RDRE++LKA+I+ ++ +GKE++KAE EA + GP VTE DIQ
Sbjct: 539 TKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQ 598
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV+ WTGIPVEKVS+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 599 HIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRP 658
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 659 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 718
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 719 EGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 778
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 779 SNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 838
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEV RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLE
Sbjct: 839 TKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLE 898
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG------APESLADPLPVV 848
DSMAEKML+R+IKEGDSVIVDVD++G+V VL+G++G A E++ DP+P++
Sbjct: 899 DSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDPIPIL 952
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 94/141 (66%), Gaps = 6/141 (4%)
Query: 21 FQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTF---TCDFHSTVAVSLSSRR 77
Q+ + R VKMMS +Q I SFSGLR +ALD + F ++ SS R
Sbjct: 44 IQATEYREPRGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGR 103
Query: 78 GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAAR 137
K+ R V KAMFERFTEKAIKVIML+QEEARRLGHN++G+E +LLGL+ EG G+AA+
Sbjct: 104 EKASRC---VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAK 160
Query: 138 VLENLGADPSNIRTQVIRMVG 158
VL+++G + + R +V +++G
Sbjct: 161 VLKSMGINLKDSRVEVEKIIG 181
>gi|222616839|gb|EEE52971.1| hypothetical protein OsJ_35634 [Oryza sativa Japonica Group]
Length = 832
Score = 1314 bits (3400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/767 (88%), Positives = 729/767 (95%), Gaps = 9/767 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 68 GRGNGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADPSNIRTQVIRM+GE+TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 126 SLGADPSNIRTQVIRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 186 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 246 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPV+VPEP+VDETI+IL+GLRERYEIHHK
Sbjct: 306 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIHHK 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL+SAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEAREL+KEL+QI
Sbjct: 366 LRYTDDALISAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKELKQI 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVR QDFEKAGELRDREM+LKAQI+AL+DK KEMSKAETE+G+ GP+V E DIQ
Sbjct: 426 TKDKNEAVRSQDFEKAGELRDREMELKAQITALIDKSKEMSKAETESGETGPLVNEADIQ 485
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESD+LLKMEETLH+RVIGQDEAVKAISR+IRRARVGLKNPNRP
Sbjct: 486 HIVSSWTGIPVEKVSSDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARVGLKNPNRP 545
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIF+GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 546 IASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 605
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 606 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 665
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGR+IGFDLDYDEKDSSY+RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL
Sbjct: 666 SNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQL 725
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIA+IMLKEVFDRLK KDI+LQVTE+F+ER+V+EG+NPSYGARPLRRAIMRLLE
Sbjct: 726 TKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNPSYGARPLRRAIMRLLE 785
Query: 801 DSMAEKMLAREIKEGDSVIVDVD---SDGNVTVLNGSSGAPESLADP 844
DS+AEKMLA E+K VI+ + G V LN SG PE L+ P
Sbjct: 786 DSLAEKMLAGEVKR---VILPLSMWIPQGKVIELNAQSGFPE-LSTP 828
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|297819504|ref|XP_002877635.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
gi|297323473|gb|EFH53894.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
Length = 953
Score = 1312 bits (3396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 671/775 (86%), Positives = 723/775 (93%), Gaps = 9/775 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 181 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 238
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ E + GG S +KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 239 NLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVV 298
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQPQIERVVQIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP+TIEGK VITLD
Sbjct: 299 GRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLD 358
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 359 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 418
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+V+E IQIL GLRERYEIHHK
Sbjct: 419 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILHGLRERYEIHHK 478
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQ+PEEARELEK+LRQI
Sbjct: 479 LRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKQLRQI 538
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFE AG RDRE++L+A+I+ ++ GKE++KAE EA + GP VTE DIQ
Sbjct: 539 TKEKNEAVRGQDFEMAGSHRDREIELRAEIANVLALGKEVAKAENEAEEGGPTVTESDIQ 598
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV+ WTGIPVEKVS+DES RLL+ME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 599 HIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRP 658
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 659 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 718
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 719 EGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 778
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 779 SNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 838
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEV RL+ K+IELQVTERF+ERVV+EG++PSYGARPLRRAIMRLLE
Sbjct: 839 TKLEVKEIADIMLKEVVARLEDKEIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLE 898
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG-------APESLADPLPVV 848
DSMAEKML+R+IKEGDSVIVDVD++G+V VL+G++ A E++ DP+PV+
Sbjct: 899 DSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGNNSGRAGGFTAEEAMEDPIPVL 953
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 16 PGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTF---TCDFHSTVAVS 72
PG R Q++ K R VKMM +Q +I SFSGLR +ALD + F +
Sbjct: 40 PGLR-IQAKEYRKPRGCVKMMCSLQAPVLKIQSFSGLRAPSALDYMARPSPGFLVKFKRA 98
Query: 73 LSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGE 132
+SSRR K+ R V KAMFERFTEKAIKVIML+QEEARRLGHN++G+E +LLGL+ EG
Sbjct: 99 ISSRREKASRC---VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGT 155
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGEST 161
G+AA+VL+++G + + R +V +++G +
Sbjct: 156 GIAAKVLKSMGINLKDSRVEVEKIIGRGS 184
>gi|168028746|ref|XP_001766888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681867|gb|EDQ68290.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 1311 bits (3393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/756 (88%), Positives = 715/756 (94%), Gaps = 2/756 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+TEAVG G GSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 126 NLGADPSNIRTQVIRMVGENTEAVGVRSGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR QIERV QILGRRTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGK V+TLD
Sbjct: 186 GRISQIERVTQILGRRTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKNVVTLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 246 MGLLVAGTKYRGEFEERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPV VPEP+V+ETI+IL+GLRERYEIHHK
Sbjct: 306 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVLVPEPTVEETIEILRGLRERYEIHHK 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEAL++AAQLSYQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEA+EL+KELR +
Sbjct: 366 LRYTDEALIAAAQLSYQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEAKELDKELRAV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRDREM+LKAQISA ++K KE KAE+E GDVGP V E DIQ
Sbjct: 426 TKEKNEAVRGQDFEKAGELRDREMELKAQISAFIEKDKEKVKAESETGDVGPTVEEADIQ 485
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IVSAWTGIPVEKVS+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 486 QIVSAWTGIPVEKVSSDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRRARVGLKNPNRP 545
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAK+LA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+
Sbjct: 546 IASFIFSGPTGVGKSELAKSLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYS 605
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 606 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 665
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGG IGF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 666 SNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 725
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF+RLK K+I+LQVTERFR+RVVEEGY+PSYGARPLRRAIMRLLE
Sbjct: 726 TKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVEEGYSPSYGARPLRRAIMRLLE 785
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 836
DSMAE+ML+ EIKEGDS I+DVD DGNVTVLNG++G
Sbjct: 786 DSMAERMLSGEIKEGDSAIIDVDGDGNVTVLNGTTG 821
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIML+QEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + R
Sbjct: 1 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|168026983|ref|XP_001766010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682653|gb|EDQ69069.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 671/756 (88%), Positives = 717/756 (94%), Gaps = 2/756 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+TEAVG G G GSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 126 NLGADPSNIRTQVIRMVGENTEAVGVGAGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR QIERV QILGRRTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGKKVITLD
Sbjct: 186 GRVAQIERVTQILGRRTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 246 MGLLVAGTKYRGEFEERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPV VPEP+V+ETI+IL+GLRERYEIHHK
Sbjct: 306 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVLVPEPTVEETIEILRGLRERYEIHHK 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEAL++AAQLSYQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEA+EL+KELR +
Sbjct: 366 LRYTDEALIAAAQLSYQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEAKELDKELRAV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRDREM+LKAQISA ++K KE KAE+E GDVGP V E DIQ
Sbjct: 426 TKEKNEAVRGQDFEKAGELRDREMELKAQISAFIEKDKEQMKAESETGDVGPTVEESDIQ 485
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IVSAWTGIPVEKVS+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 486 QIVSAWTGIPVEKVSSDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRRARVGLKNPNRP 545
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAK+LA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+
Sbjct: 546 IASFIFSGPTGVGKSELAKSLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYS 605
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 606 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 665
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGG IGF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 666 SNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 725
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLE
Sbjct: 726 TKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLE 785
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 836
DSMAE+ML+ EIKEGDS I+DVD DGNVTVLNG++G
Sbjct: 786 DSMAERMLSGEIKEGDSAIIDVDGDGNVTVLNGTTG 821
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+V++++G + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVMKSMGVNLKEAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|168007899|ref|XP_001756645.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692241|gb|EDQ78599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 933
Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/751 (89%), Positives = 712/751 (94%), Gaps = 2/751 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 165 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 222
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+TEAVG G G GSSGNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 223 NLGADPSNIRTQVIRMVGENTEAVGVGGGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 282
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR QIERV QILGRRTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGKKVITLD
Sbjct: 283 GRVAQIERVTQILGRRTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLD 342
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 343 MGLLVAGTKYRGEFEERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPA 402
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPV VPEP+V+ETI ILKGLRERYEIHHK
Sbjct: 403 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVLVPEPTVEETIDILKGLRERYEIHHK 462
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLSYQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEAREL+K+LR +
Sbjct: 463 LRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEARELDKQLRAV 522
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRD+EM+LKAQISA ++KGKE KAE+E GDVGP V E DIQ
Sbjct: 523 TKEKNEAVRGQDFEKAGELRDKEMELKAQISAFIEKGKEQMKAESETGDVGPTVEESDIQ 582
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+AWTGIP+EKVS+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 583 QIVAAWTGIPMEKVSSDESDRLLKMEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRP 642
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+
Sbjct: 643 IASFIFSGPTGVGKSELAKALASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYS 702
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 703 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 762
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGG IGF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 763 SNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 822
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLE
Sbjct: 823 TKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLE 882
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
DSMAE+ML+ EIKEGDS I+DVD DGNVTVL
Sbjct: 883 DSMAERMLSGEIKEGDSAIIDVDGDGNVTVL 913
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 99/153 (64%), Gaps = 12/153 (7%)
Query: 17 GGRHFQSQNAGKS----RRNVKMMSYMQPSASRISSFSGLRRSNALDTFTC----DFHST 68
G R + Q A ++ RRNV + M S +R SFSG+R+ + +D DF S
Sbjct: 20 GSRKSKKQGAARAASMGRRNVDKSASM--SVARFQSFSGMRKGSVVDALVVKQGKDFKSV 77
Query: 69 VAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLL 128
VA S ++ G S + G V AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+
Sbjct: 78 VANS-TAVTGHSRPSRG-VTTAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLI 135
Query: 129 REGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
EG G+AA+VL+++G + R +V +++G +
Sbjct: 136 GEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGS 168
>gi|168053476|ref|XP_001779162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669421|gb|EDQ56008.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 1301 bits (3367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/747 (88%), Positives = 705/747 (94%), Gaps = 2/747 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 168 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 225
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+ EAVG G G GS NKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 226 NLGADPSNIRTQVIRMVGENNEAVGVGGGSGSGSNKMPTLEEYGTNLTKLAEEGKLDPVV 285
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR QIERV QILGRRTKNNPCLIGEPGVGKTA+AEGLAQRIASGDVP+TIEGKKVITLD
Sbjct: 286 GRVAQIERVTQILGRRTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLD 345
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 346 MGLLVAGTKYRGEFEERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPA 405
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPV VPEP+V+ETI+ILKGLRERYEIHHK
Sbjct: 406 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVLVPEPTVEETIEILKGLRERYEIHHK 465
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEAL++AAQLSYQYISDRFLPDKAIDLIDEAGS+VRL+HAQLPEEAREL+K+LR +
Sbjct: 466 LRYTDEALIAAAQLSYQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEARELDKQLRAV 525
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRD+EM+LKAQIS ++KGKE KAE+E GDVGP V E DIQ
Sbjct: 526 TKEKNEAVRGQDFEKAGELRDKEMELKAQISVFIEKGKEQMKAESETGDVGPTVEESDIQ 585
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+AWTGIP+EKVS+DESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 586 QIVAAWTGIPMEKVSSDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRRARVGLKNPNRP 645
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY+
Sbjct: 646 IASFIFSGPTGVGKSELAKALASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYS 705
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 706 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 765
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGG IGF LDY EKDSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 766 SNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 825
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF+RLK K+I+LQVTERFR+RVV+EGY+PSYGARPLRRAIMRLLE
Sbjct: 826 TKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLE 885
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGN 827
DSMAE+ML+ EIKEGDS I+DVDSD N
Sbjct: 886 DSMAERMLSGEIKEGDSAIIDVDSDAN 912
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 103/159 (64%), Gaps = 11/159 (6%)
Query: 4 LLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDTFTC 63
L+ QL ++ R +Q A R+N+K + + S S SFSG+R+++A+D T
Sbjct: 17 LVGQLNDS---AKSKRRTIAQAASTGRKNLKKSASL--SVSGFQSFSGMRKASAVDALTV 71
Query: 64 ----DFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIG 119
D S VA S++ G S + G V AMFERFTEKAIKVIMLAQEEARRLGHN++G
Sbjct: 72 KQGKDLKSVVAKSMAVA-GHSRPSRG-VTFAMFERFTEKAIKVIMLAQEEARRLGHNFVG 129
Query: 120 SEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
+E +LLGL+ EG G+AA+VL+++G + R +V +++G
Sbjct: 130 TEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIG 168
>gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea]
Length = 891
Score = 1294 bits (3349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/733 (91%), Positives = 697/733 (95%), Gaps = 2/733 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 157 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 214
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGE+TEAVGAGVGGG++GNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 215 NLGADPSNIRTQVIRMVGENTEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVV 274
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITL
Sbjct: 275 GRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLH 334
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID ANILKP
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDRANILKPR 394
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQILKGLRERYEIHHK
Sbjct: 395 FRRGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHK 454
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALV+AAQLSYQYISDRFLPDKAIDLIDEAGSRV + E + EKELRQ+
Sbjct: 455 LRYTDEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVLPSSLKKLESWLQHEKELRQL 514
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVRGQDFEKAGELRDREMDLKAQISALV+K KEMSKAETEAGDVGP+VTE DIQ
Sbjct: 515 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVEKKKEMSKAETEAGDVGPMVTESDIQ 574
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVSTDESDRLLKME+TLH RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 575 HIVSSWTGIPVEKVSTDESDRLLKMEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRP 634
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 635 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 694
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT DFKNTLLIMT
Sbjct: 695 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTADFKNTLLIMT 754
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL
Sbjct: 755 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 814
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TKLEVKEIADIMLKEVF RLK K+IELQVTERFR+RVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 815 TKLEVKEIADIMLKEVFGRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLE 874
Query: 801 DSMAEKMLAREIK 813
DSMAEKMLAR+ K
Sbjct: 875 DSMAEKMLARKSK 887
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 112/168 (66%), Gaps = 15/168 (8%)
Query: 1 MARLLAQLTNAPAL---VPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNA 57
MA L Q TN P+L V G Q Q + K + VKMM+ +Q R+ +FSG+R NA
Sbjct: 1 MAGALIQSTNIPSLAYKVNG----QFQRSDKGNKAVKMMASLQDPGYRMRTFSGVRGGNA 56
Query: 58 LDTF----TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRL 113
LDT C F+S + LS R+G + R VV+AMFERFTEKAIKVIMLAQEEARRL
Sbjct: 57 LDTLGTTSEC-FYSKMRAVLSVRKGTASRG---VVRAMFERFTEKAIKVIMLAQEEARRL 112
Query: 114 GHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
GHN++G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 113 GHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 160
>gi|307104044|gb|EFN52300.1| hypothetical protein CHLNCDRAFT_32555 [Chlorella variabilis]
Length = 844
Score = 1235 bits (3196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/755 (81%), Positives = 683/755 (90%), Gaps = 4/755 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR LGHNYIG+EH+LLGLLREGEGVA+RVLE
Sbjct: 74 GRGSGFV--AVEIPFTPRAKRVLELSLEEARALGHNYIGTEHILLGLLREGEGVASRVLE 131
Query: 141 NLGADPSNIRTQVIRMVGESTE-AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
LGADP IRTQVIRMVGES E GG S NKMPTLEEYGTNLT+ AEEGKLDPV
Sbjct: 132 TLGADPQKIRTQVIRMVGESQEPVGSTVGGGSSGSNKMPTLEEYGTNLTQQAEEGKLDPV 191
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IERV QILGRRTKNNPCLIGEPGVGKTA+AEGLAQ+IA+GDVP+TIEGK+V+TL
Sbjct: 192 VGRKKEIERVTQILGRRTKNNPCLIGEPGVGKTAVAEGLAQKIATGDVPETIEGKQVVTL 251
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 252 DMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKP 311
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIEKDPALERRFQPV VPEPSV+ET +I+ GLRERYE HH
Sbjct: 312 ALARGELQCIGATTLDEYRKHIEKDPALERRFQPVHVPEPSVEETYEIMLGLRERYEAHH 371
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KLRYTDEAL +AA+ S QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL+KELR
Sbjct: 372 KLRYTDEALRAAAKYSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKELRA 431
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTEVD 498
+ KEK+ AVR QDFEKAG LRDREM+LK+QISA+ K+ ++AE E+G+ G P+VTE D
Sbjct: 432 LLKEKDAAVRAQDFEKAGSLRDREMELKSQISAITSSAKDSARAEMESGEGGGPMVTEQD 491
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I +IV+ WTGIP+EKVS+DE++RL+KME+ LH RVIGQ+EAV AISRAIRRARVGLKNP+
Sbjct: 492 IANIVAQWTGIPIEKVSSDETERLVKMEQVLHGRVIGQEEAVTAISRAIRRARVGLKNPS 551
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVG
Sbjct: 552 RPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVG 611
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL+I
Sbjct: 612 YNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLII 671
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
+TSNVGSSVIEKGG IGF LD E+DSSYNRIKSLV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 672 LTSNVGSSVIEKGGGGIGFQLDNSEEDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFR 731
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK EVK+IADIML++VF R + K I++ VTERF++R+V+EGYNP+YGARPLRRAIMRL
Sbjct: 732 QLTKQEVKQIADIMLRQVFKRAEEKGIKIDVTERFKDRLVDEGYNPAYGARPLRRAIMRL 791
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
LEDSMAE+MLA +IKEGDSVI+DVD+DG ++VLNG
Sbjct: 792 LEDSMAERMLAGDIKEGDSVIIDVDADGQISVLNG 826
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 59/72 (81%)
Query: 87 VVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP 146
V + MFERFTEKAIKV+MLAQEEARRLGHN++G+E +LLGL+ E G+AA+VL+++G
Sbjct: 3 VTRMMFERFTEKAIKVVMLAQEEARRLGHNFVGTEQILLGLIGESTGIAAKVLKSMGVTL 62
Query: 147 SNIRTQVIRMVG 158
+ R +V +++G
Sbjct: 63 KDARVEVEKIIG 74
>gi|302841992|ref|XP_002952540.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
gi|300262179|gb|EFJ46387.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
Length = 915
Score = 1225 bits (3170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/760 (79%), Positives = 684/760 (90%), Gaps = 9/760 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ ++ EEAR+LGHNYIG+EH+LLGLLREGEGVAARVLE
Sbjct: 142 GRGSGFV--AVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLE 199
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS--GNKMPTLEEYGTNLTKLAEEGKLDP 198
LGADP+ IRTQVIRMVGES E VGAGVGG + NK PTL+EYGTNLT+ A EGKLDP
Sbjct: 200 TLGADPAKIRTQVIRMVGESQEPVGAGVGGSQAQGSNKTPTLQEYGTNLTQQAAEGKLDP 259
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
VVGR+ QIERV+QILGRRTKNNPCLIGEPGVGKTA+AEGLAQ+IA+GDVP+TIEGK+VIT
Sbjct: 260 VVGRKKQIERVIQILGRRTKNNPCLIGEPGVGKTAVAEGLAQKIATGDVPETIEGKQVIT 319
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LDMGLLVAGTKYRGEFEERLKKLM+EIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILK
Sbjct: 320 LDMGLLVAGTKYRGEFEERLKKLMDEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILK 379
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+LARGELQCIGATTLDEYRKHIEKDPALERRFQPV VPEP+++ET +IL+GLRERYE H
Sbjct: 380 PALARGELQCIGATTLDEYRKHIEKDPALERRFQPVTVPEPTIEETFEILQGLRERYETH 439
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
HKLRYTDE+L++AA+ S QYISDRFLPDKAIDLIDEAGSRVRLRH QLPEEAR+L+KELR
Sbjct: 440 HKLRYTDESLMAAAKYSSQYISDRFLPDKAIDLIDEAGSRVRLRHIQLPEEARDLDKELR 499
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEV 497
Q+TK+K+ AVR QDFEKAG+LRDREM+LKA+I A++ KE SKAE E+ + GPVVTE
Sbjct: 500 QVTKDKDAAVRAQDFEKAGQLRDREMELKAKIQAIIAGAKEASKAEAESVEGGGPVVTEQ 559
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
DI IV+ WTGIP+EKVS+DE++RL+KMEE LH RVIGQ+EAV AISRAIRRARVGLKNP
Sbjct: 560 DIASIVAQWTGIPIEKVSSDETERLIKMEEVLHGRVIGQEEAVSAISRAIRRARVGLKNP 619
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
NRPIASFIF+GPTGVGKSELAK LA YYFGSEEAM+RLDMSEFMERHTVSKLIGSPPGYV
Sbjct: 620 NRPIASFIFAGPTGVGKSELAKTLANYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYV 679
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL+
Sbjct: 680 GYQEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLI 739
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYD----EKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 733
IMTSNVG+SVIEKGGR +GF L D E+D SY+RIKSLV EELK YFRPEFLNRLDE
Sbjct: 740 IMTSNVGASVIEKGGRSMGFFLRPDDEDMEQDMSYSRIKSLVNEELKSYFRPEFLNRLDE 799
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
+IVFRQLTK EVK+IADI LK+VF R + K I+++VTE+F++R+V+EG+NP+YGARPLRR
Sbjct: 800 IIVFRQLTKKEVKQIADIFLKDVFKRAEEKGIKIEVTEKFKDRLVDEGFNPTYGARPLRR 859
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
AIMRL+ED +AE++L +IKEGD VI+DVD DG++ VL G
Sbjct: 860 AIMRLIEDCLAERILMGDIKEGDVVIMDVDPDGSIAVLAG 899
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 75/93 (80%), Gaps = 2/93 (2%)
Query: 69 VAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLL 128
VAV ++R KSGRAG VVK+MFERFTEKAIKV+MLAQEEARRLGHN++G+E LLLGL+
Sbjct: 55 VAVPTAAR--KSGRAGRLVVKSMFERFTEKAIKVVMLAQEEARRLGHNFVGTEQLLLGLI 112
Query: 129 REGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
E G+AA+VL+++G + + R +V +++G +
Sbjct: 113 GESTGIAAKVLKSMGVNLKDARVEVEKIIGRGS 145
>gi|384250946|gb|EIE24424.1| hypothetical protein COCSUDRAFT_28166 [Coccomyxa subellipsoidea
C-169]
Length = 849
Score = 1224 bits (3168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/765 (81%), Positives = 682/765 (89%), Gaps = 14/765 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EH+LLGLLREGEGVAARVLE
Sbjct: 71 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLE 128
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
LGAD S IRTQVIRMVGES + V G G GSS NKMPTLEEYGTNLT A EGKLDPVV
Sbjct: 129 TLGADASKIRTQVIRMVGESQDTVTVGGGSGSSSNKMPTLEEYGTNLTTQATEGKLDPVV 188
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERV QILGRRTKNNPCLIGEPGVGKTA+AEGLAQ+IA+GDVP+TIEGK+VITLD
Sbjct: 189 GRKKEIERVTQILGRRTKNNPCLIGEPGVGKTAVAEGLAQKIANGDVPETIEGKQVITLD 248
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 249 MGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKPA 308
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQP----------VKVPEPSVDETIQILKG 370
LARGELQCIGATTLDEYRKHIEKDPALERRFQP VPEP+VDET QIL G
Sbjct: 309 LARGELQCIGATTLDEYRKHIEKDPALERRFQPQARLIMCFLCAHVPEPTVDETYQILLG 368
Query: 371 LRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 430
LRERYE HHKLRYTDEAL +AA+ S QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA
Sbjct: 369 LRERYEAHHKLRYTDEALDAAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 428
Query: 431 RELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV 490
R+L+KELR + KEK+ AVRGQDFEKAG LRDREM+LKAQISA+ KE AE E+
Sbjct: 429 RDLDKELRALLKEKDAAVRGQDFEKAGTLRDREMELKAQISAITGAAKEGEAAEAESSAE 488
Query: 491 G--PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIR 548
G P+VTE DI +IV+ WTGIPVEKVS+DES+RL+KMEETLH+RVIGQ+EAV AISRAIR
Sbjct: 489 GGGPLVTEADIANIVAQWTGIPVEKVSSDESERLIKMEETLHQRVIGQEEAVVAISRAIR 548
Query: 549 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 608
RARVGLKNPNRPIASFIFSGPTGVGKSELAK LA+YYFGSEEAM+RLDMSEFMERHTVSK
Sbjct: 549 RARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEFMERHTVSK 608
Query: 609 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 668
LIGSPPGYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR
Sbjct: 609 LIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 668
Query: 669 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFL 728
TVDFKNTL+IMTSNVGSSVIEKGG +GF LD E+DSSYNRIK+LV EELKQYFRPEFL
Sbjct: 669 TVDFKNTLIIMTSNVGSSVIEKGGGGLGFQLDTSEEDSSYNRIKTLVNEELKQYFRPEFL 728
Query: 729 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 788
NRLDE+IVFRQL+K EVKEIADIML EVF R + K I++ VTERF++R+VEEGYNP+YGA
Sbjct: 729 NRLDEIIVFRQLSKSEVKEIADIMLTEVFKRAEIKGIKIDVTERFKDRLVEEGYNPAYGA 788
Query: 789 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
RPLRRAIMRLLEDSMAE+ML+ +IKEGDSVI+DVD+DG V+VLNG
Sbjct: 789 RPLRRAIMRLLEDSMAERMLSGDIKEGDSVIIDVDADGQVSVLNG 833
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 53/64 (82%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ ++AIKV+MLAQEEARRLGHN++G+E +LLGL+ E G+AA+VL+++G + + R +V
Sbjct: 8 WYQQAIKVVMLAQEEARRLGHNFVGTEQILLGLIGESTGIAAKVLKSMGVNLKDARVEVE 67
Query: 155 RMVG 158
+++G
Sbjct: 68 KIIG 71
>gi|326504928|dbj|BAK06755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 1198 bits (3100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/755 (79%), Positives = 676/755 (89%), Gaps = 3/755 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A KVI + EE+R+LGHNYIG+EHLLLGL+RE +G AA VL+N AD +IR +VI
Sbjct: 131 FTASAKKVIESSNEESRQLGHNYIGTEHLLLGLIREDDGAAAIVLKNFQADLGDIRNEVI 190
Query: 155 RMVGESTE--AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+M+ E +E VGAGVGGGSSG KMPTLEEYGTNLTKLA+EGKLDPVVGR+ QIERV+QI
Sbjct: 191 KMITEMSEDQTVGAGVGGGSSGAKMPTLEEYGTNLTKLAQEGKLDPVVGRKKQIERVLQI 250
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+T+EGK VITLDMGLLVAGTKYRG
Sbjct: 251 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETVEGKTVITLDMGLLVAGTKYRG 310
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEERLKKLMEEIKQ+ +IILF+DEVHTL+GAGAAEGAIDAANILKP+LARGELQC+GAT
Sbjct: 311 EFEERLKKLMEEIKQNGDIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCLGAT 370
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
T+DEYRKHIEKDPALERRFQPVKVPEP+VDETI ILKGLRERYEIHHKLRYTDEAL++AA
Sbjct: 371 TIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKGLRERYEIHHKLRYTDEALIAAA 430
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QLSYQYISDRFLPDKAIDL+DEAGS VRLRHA+LP+EA++L+K+L++IT++KN+A+R Q
Sbjct: 431 QLSYQYISDRFLPDKAIDLVDEAGSLVRLRHAKLPDEAKDLDKKLKEITRQKNDAIRSQQ 490
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGIPV 511
FE A ELR E++LK QI +LVDK KE+SKAE E+G GP+VTE DIQ IV++WT +PV
Sbjct: 491 FETAAELRSEELELKTQIMSLVDKSKEVSKAEVESGASTGPMVTEADIQRIVASWTSVPV 550
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
EKVS DES RLLKMEETLH RVIGQDEAV+AI RAIRRARVGL+NPNRP+ASFIF+GPTG
Sbjct: 551 EKVSVDESSRLLKMEETLHGRVIGQDEAVRAIGRAIRRARVGLRNPNRPVASFIFAGPTG 610
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGKSELAKALAA Y+GSEEAM+RLDMSEFMERHTV+KLIGSPPGYVGYTEGGQLTEAVRR
Sbjct: 611 VGKSELAKALAASYYGSEEAMVRLDMSEFMERHTVAKLIGSPPGYVGYTEGGQLTEAVRR 670
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
RPYTVVL DEIEKAHPDVFN+MLQI+EDGRLTDS+GRTVDFKNTL+IMTSNVGSSVIEKG
Sbjct: 671 RPYTVVLLDEIEKAHPDVFNLMLQIMEDGRLTDSRGRTVDFKNTLIIMTSNVGSSVIEKG 730
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
G+++GFD D E +SY RIKSLV EE+KQYFRPEFLNRLDEMIVFRQLTK+EVKEIA I
Sbjct: 731 GKQLGFDHDDGEARNSYGRIKSLVDEEMKQYFRPEFLNRLDEMIVFRQLTKMEVKEIAAI 790
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
ML EV R++TK IEL VTE F+E VVEEGY+PSYGARPLRRAIMRLLED +A+KMLA +
Sbjct: 791 MLDEVAGRMRTKGIELLVTESFKELVVEEGYDPSYGARPLRRAIMRLLEDKLADKMLAED 850
Query: 812 IKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLP 846
+KEGD VIVD D GNV VL+ S PE P
Sbjct: 851 VKEGDGVIVDADPAGNVVVLSRHSDLPEDQPLAFP 885
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FTEKAI+VIMLAQEE+RRLGH+ +GSE +LLGL+ EG G+AA+VL + G + + R
Sbjct: 52 MFESFTEKAIRVIMLAQEESRRLGHHTVGSEQILLGLVGEGTGIAAKVLRSAGLNLKDAR 111
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 112 AEVEKVLG 119
>gi|414587487|tpg|DAA38058.1| TPA: hypothetical protein ZEAMMB73_793135 [Zea mays]
Length = 896
Score = 1192 bits (3085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/729 (86%), Positives = 661/729 (90%), Gaps = 17/729 (2%)
Query: 114 GHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS 173
GHNY+GSEHLLLGLLREGEG R QVIRMVGESTEAVGAGVGGGSS
Sbjct: 178 GHNYVGSEHLLLGLLREGEGTDVRY-----------DVQVIRMVGESTEAVGAGVGGGSS 226
Query: 174 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK-T 232
G KMPTLEEYGTNLTKLAEE GRQ QIERV QILGRRTK P K
Sbjct: 227 GQKMPTLEEYGTNLTKLAEES-----FGRQDQIERVTQILGRRTKKQPLPNWRAWCWKRL 281
Query: 233 AIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEII 292
+ GL + G EGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ+++II
Sbjct: 282 LLLRGLLSVLPMGMFLKQFEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNEDII 341
Query: 293 LFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQ 352
LFIDEVHTLIGAGAAEGAIDAANILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQ
Sbjct: 342 LFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQ 401
Query: 353 PVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLI 412
PVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD+AL++AAQLSYQYISDRFLPDKAIDLI
Sbjct: 402 PVKVPEPTVDETIQILRGLRERYELHHKLRYTDDALIAAAQLSYQYISDRFLPDKAIDLI 461
Query: 413 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISA 472
DEAGSRVRLRHAQLP+EA+EL+KELRQITK+KNEAVRGQDFEKAGELRDREM+LKAQI+A
Sbjct: 462 DEAGSRVRLRHAQLPDEAKELDKELRQITKQKNEAVRGQDFEKAGELRDREMELKAQITA 521
Query: 473 LVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKR 532
++DK KEM KAETE+G+VGP+VTE DIQHIVS+WTGIPVEKVS+DESDRLLKMEETLH R
Sbjct: 522 IIDKSKEMIKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTR 581
Query: 533 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 592
+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM
Sbjct: 582 IIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 641
Query: 593 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 652
IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM
Sbjct: 642 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 701
Query: 653 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIK 712
MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIK
Sbjct: 702 MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIK 761
Query: 713 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 772
SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK KDI LQVTE+
Sbjct: 762 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDINLQVTEK 821
Query: 773 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 832
FR+RVV+EGYNPSYGARPLRRAIMRLLEDS+AEKMLA E+KEGDS IVDVDSDG V VLN
Sbjct: 822 FRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSDGKVIVLN 881
Query: 833 GSSGAPESL 841
G SG E L
Sbjct: 882 GGSGVAEPL 890
>gi|149275671|gb|ABR23161.1| ATP-dependent Clp protease regulatory subunit ClpC [Ulva fasciata]
Length = 904
Score = 1181 bits (3055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/755 (77%), Positives = 666/755 (88%), Gaps = 5/755 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGH+YIG+EH+LLGLLREGEG+AARVLE
Sbjct: 137 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHSYIGTEHILLGLLREGEGIAARVLE 194
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
++GAD IR QV+RMVGES E VGAGVGG S NK PTLEEYGTNLTK AEEGKLDPVV
Sbjct: 195 SMGADSEKIRHQVVRMVGESQEPVGAGVGGSQSSNKTPTLEEYGTNLTKQAEEGKLDPVV 254
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RV+QILGRRTKNNPCLI V + AEGLAQ+IASGDVP+TIEGK+ +TLD
Sbjct: 255 GRTKEIDRVIQILGRRTKNNPCLIVSL-VSVDSSAEGLAQKIASGDVPETIEGKQAVTLD 313
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEE LKKLM+EIKQ+D+IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 314 MGLLVAGTKYRGEFEEHLKKLMDEIKQNDDIILMIDEVHTLIGAGAAEGAIDAANILKPA 373
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQC+GATTLDEYRKHIEKDPALERRF+PV+V EPSVDET QIL GLRERYE HHK
Sbjct: 374 LARGELQCMGATTLDEYRKHIEKDPALERRFRPVRVNEPSVDETYQILTGLRERYEAHHK 433
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD+AL++AAQ S+QYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE+EKELR I
Sbjct: 434 LRYTDDALLAAAQYSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREVEKELRGI 493
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALV-DKGKEMSKAETEAGDVGPVVTEVDI 499
KEK+ VR Q+FEKAGELRDRE++LKA+I +V DK + AG GP V E DI
Sbjct: 494 QKEKDSCVRAQEFEKAGELRDREVELKAKIDTIVSDKKAQDDAEADAAGGAGPTVQETDI 553
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
+IV+ WTGIPVEKVS+DE++RL+ ME LH RVIGQ+EAV AISRAIRRARVGLKNPNR
Sbjct: 554 ANIVAQWTGIPVEKVSSDETERLVNMESVLHNRVIGQEEAVVAISRAIRRARVGLKNPNR 613
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGKSELAK LA YYFGSEEAM+RLDMSE+MERHTV+KLIGSPPGYVGY
Sbjct: 614 PIASFIFSGPTGVGKSELAKTLATYYFGSEEAMVRLDMSEYMERHTVAKLIGSPPGYVGY 673
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL+IM
Sbjct: 674 NEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLIIM 733
Query: 680 TSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
TSNVGS+VIEKGG +GF LD D E+++SYNRIK+LV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 734 TSNVGSTVIEKGGGGLGFQLDSDNEEENSYNRIKNLVMEELKQYFRPEFLNRLDEIIVFR 793
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK EVK+IADIMLK V +R K K+I + +TERF++R+V+EG+NP+YGARPLRRAI RL
Sbjct: 794 QLTKAEVKQIADIMLKGVLERAKEKEITIDLTERFKDRLVDEGFNPAYGARPLRRAIQRL 853
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
LED++AE+ML +I+EGD +I+DVD++GN+TVLNG
Sbjct: 854 LEDALAERMLGGDIQEGDKIIMDVDAEGNITVLNG 888
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Query: 46 ISSFSGLRRSNALDTFTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIML 105
+S+F+G RR N +D T H V S +SR +SG + MFERFTEKAIKV+ML
Sbjct: 28 LSTFTGFRRGNVVDAATACPHGAVK-SKTSRSSQSGTKKPTTM--MFERFTEKAIKVVML 84
Query: 106 AQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
AQEE+RRLGHN++G+E +LLGL+ E G+AA+VL+ +G + RT+V +++G
Sbjct: 85 AQEESRRLGHNFVGTEQILLGLIGEATGIAAKVLKQMGVNLKEARTEVEKIIG 137
>gi|357152345|ref|XP_003576089.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 943
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/754 (78%), Positives = 673/754 (89%), Gaps = 9/754 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A KVI + EE+R+LGHNYIGSEHLLLGL+RE +G A +L+ ADP+NIR +V+
Sbjct: 179 FTASAKKVIEFSAEESRQLGHNYIGSEHLLLGLVREDDGAALIILKKFQADPNNIRNEVM 238
Query: 155 RMVGESTEA--VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
RM+ E +E VG GVGGGS+G+KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV+QI
Sbjct: 239 RMISEISEGQTVGTGVGGGSTGSKMPTLEEYGTNLTKLAEEGKLDPVVGRQKQIERVLQI 298
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
LGRRTKNNPCLIGEPGVGKTA+AEGLAQRI +GDVP+T+EGK VITLDMGLLVAGTKYRG
Sbjct: 299 LGRRTKNNPCLIGEPGVGKTAVAEGLAQRIVTGDVPETVEGKTVITLDMGLLVAGTKYRG 358
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEERLKKLM+EIKQ+ EIILF+DEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGAT
Sbjct: 359 EFEERLKKLMDEIKQNGEIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGAT 418
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
T+DEYRKHIEKDPALERRFQPVKVPEP VDE I ILKGL+ERYEIHHKLRYTDEALV+AA
Sbjct: 419 TIDEYRKHIEKDPALERRFQPVKVPEPMVDEAIGILKGLQERYEIHHKLRYTDEALVAAA 478
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
LS+QYISDRFLPDKAIDL+DEAGS VRLRHA+LPEEA+ L+K+L+++ K+K++A+R Q
Sbjct: 479 LLSHQYISDRFLPDKAIDLMDEAGSLVRLRHAKLPEEAKVLDKKLKEVIKQKDDAIRCQQ 538
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPV 511
FE AGELR E++LK+QI++LV K KEM+KAE E+G + GPVVTE DIQ IVS WT +PV
Sbjct: 539 FEMAGELRSEEVELKSQITSLVAKNKEMNKAEVESGALAGPVVTEADIQQIVSTWTSVPV 598
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
EKVS DESDRLL+MEETLH+RVIGQDEAVKAISRAIRRARVGL++P+RPIASFIF+GPTG
Sbjct: 599 EKVSVDESDRLLRMEETLHRRVIGQDEAVKAISRAIRRARVGLRDPSRPIASFIFAGPTG 658
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGKSELAK+LA Y+GSEEAM+RLDMSEFMERHTV+KLIGSPPGYVGY+EGGQLTEAVRR
Sbjct: 659 VGKSELAKSLATCYYGSEEAMVRLDMSEFMERHTVAKLIGSPPGYVGYSEGGQLTEAVRR 718
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
RPYTVVL DEIEKAHPDVFN+MLQI+EDGRLTDSKGR VDFKNTL+IMTSNVGSSVIEKG
Sbjct: 719 RPYTVVLLDEIEKAHPDVFNLMLQIMEDGRLTDSKGRMVDFKNTLIIMTSNVGSSVIEKG 778
Query: 692 GRRIGFDLDYDEKD------SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
GR++GFD +D SSY RIKSLV EE+KQYFRPEFLNRLDEMIVFRQL K EV
Sbjct: 779 GRQLGFDNGDGVEDGEISSSSSYGRIKSLVDEEMKQYFRPEFLNRLDEMIVFRQLNKFEV 838
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
KEIADIML EV R+K K IEL VTE F+E VV+EG++PSYGARPLRRAIMRLLED++A+
Sbjct: 839 KEIADIMLAEVAGRMKEKGIELLVTESFKELVVDEGFDPSYGARPLRRAIMRLLEDTLAD 898
Query: 806 KMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 839
K+LA E+KEGDSVI+D DS GNV VL+ +PE
Sbjct: 899 KILAEEVKEGDSVILDADSAGNVAVLSRHGDSPE 932
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Query: 72 SLSSRRGKSGRAGGFVV-KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLRE 130
S SSR G R FV +AMFE FTEKAIKVI+LAQEE RRLGHN +GSE +LLGL+ E
Sbjct: 83 SSSSRGGPRRR---FVTTRAMFESFTEKAIKVIILAQEETRRLGHNTVGSEQILLGLIGE 139
Query: 131 GEGVAARVLENLGADPSNIRTQVIRMVGEST 161
G G+AAR L++ G + + R +V + +G T
Sbjct: 140 GTGIAARALKSAGLNLKDARVEVEKALGRGT 170
>gi|115485055|ref|NP_001067671.1| Os11g0267400 [Oryza sativa Japonica Group]
gi|75269548|sp|Q53LY0.1|CLPC3_ORYSJ RecName: Full=Chaperone protein ClpC3, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 3; AltName: Full=Casein lytic proteinase C3;
Flags: Precursor
gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|77549794|gb|ABA92591.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113644893|dbj|BAF28034.1| Os11g0267400 [Oryza sativa Japonica Group]
Length = 932
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/769 (75%), Positives = 668/769 (86%), Gaps = 8/769 (1%)
Query: 80 SGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVL 139
+GR G V M +FT A V+ +QEEA +LGHNY+GSEHLLLGLLRE G A VL
Sbjct: 164 AGRGPGMV--PMEIKFTPAAKNVLQASQEEAHQLGHNYVGSEHLLLGLLRE-HGAALVVL 220
Query: 140 ENLGADPSNIRTQVIRMVGESTE---AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKL 196
+N ADPSNIR++VIRM+ +++E V A VGGGSS K+PTL EYGTNLTKLAEEGKL
Sbjct: 221 KNFQADPSNIRSEVIRMISDTSEDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKL 280
Query: 197 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKV 256
DPVVGRQ Q++RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+G+VP+TI+GK V
Sbjct: 281 DPVVGRQNQVDRVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETIDGKTV 340
Query: 257 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANI 316
ITLDMGLLVAGTKYRGEFEERLKKLM+E+KQ+ EIILF+DEVHTL+GAGAAEGAIDAANI
Sbjct: 341 ITLDMGLLVAGTKYRGEFEERLKKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAIDAANI 400
Query: 317 LKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYE 376
LKP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+VDETI ILKGLRERYE
Sbjct: 401 LKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKGLRERYE 460
Query: 377 IHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKE 436
IHHK++YTDE+L++AA+LSYQYISDRFLPDKAIDL+DEAGS VRLR+AQLP+EA+ELEK+
Sbjct: 461 IHHKVQYTDESLIAAARLSYQYISDRFLPDKAIDLVDEAGSLVRLRNAQLPDEAKELEKK 520
Query: 437 LRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVT 495
L++I EK+EA+R QDFEKAG LR E++LK++I +LVDK KEMSKA ++G+ GP VT
Sbjct: 521 LKKIMAEKSEAIRSQDFEKAGALRGEEVELKSEIMSLVDKSKEMSKAAVDSGESPGPTVT 580
Query: 496 EVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLK 555
E D+QHIVS+WTG+PVEKV+ DES RLL ME +LH+R++GQDEAV AISRAIRRARVGL+
Sbjct: 581 EADVQHIVSSWTGVPVEKVTVDESSRLLAMESSLHRRIVGQDEAVTAISRAIRRARVGLR 640
Query: 556 NPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 615
+P RPIASFIF+GPTGVGKSELAKALAAYY+GS EAM+RLDMSEFME+HTV+KL+GSPPG
Sbjct: 641 DPRRPIASFIFAGPTGVGKSELAKALAAYYYGSPEAMVRLDMSEFMEKHTVAKLVGSPPG 700
Query: 616 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 675
YVGY EGGQLTEA+RRRPY VVLFDE+EKAHPDVFNMMLQIL+DGRLTDSKGRTVDFKN+
Sbjct: 701 YVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDSKGRTVDFKNS 760
Query: 676 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMI 735
L+IMTSNVGS VIEKGGR++ D Y IK++V EE+K+YFRPEFLNRLDEMI
Sbjct: 761 LIIMTSNVGSGVIEKGGRQL-GFAGDGSGDGGYGVIKNMVEEEMKRYFRPEFLNRLDEMI 819
Query: 736 VFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAI 795
VFRQLTKLEVKEIA IML EV R+ K I LQVTERF+E VVE+G++PSYGARPLRRAI
Sbjct: 820 VFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQVTERFKELVVEQGFDPSYGARPLRRAI 879
Query: 796 MRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
MRLLED++ +KMLA EI GDSVIVD D DGNV V+ S L P
Sbjct: 880 MRLLEDTLTDKMLAGEICAGDSVIVDADGDGNVVVVGRRSAGLPDLKSP 928
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F+ FT+KAIK IM+AQEEARRLGH+ GSE LLLG++ EG G+ A+VL G R
Sbjct: 99 FDMFTDKAIKAIMMAQEEARRLGHHAAGSEQLLLGVIGEGTGIGAKVLRGAGLSLKAARA 158
Query: 152 QVIRMVG 158
+V +M G
Sbjct: 159 EVEKMAG 165
>gi|220910059|ref|YP_002485370.1| ATPase AAA [Cyanothece sp. PCC 7425]
gi|219866670|gb|ACL47009.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7425]
Length = 825
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/756 (75%), Positives = 664/756 (87%), Gaps = 8/756 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG G + K PTL+E+G+NLT++A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VSAGSSQGRT--KTPTLDEFGSNLTQMAADGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD ++ K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILQEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEKHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF+KAGELRDREM++KA+I AL + K + +E EA PVV+E DI
Sbjct: 423 LKEKDDAVRAQDFDKAGELRDREMEIKAEIRALSQQKKAETTSEDEAQS--PVVSEEDIA 480
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 481 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRIIGQDEAVKAISRAIRRARVGLKNPNRP 540
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAKALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 541 IASFIFSGPTGVGKTELAKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 600
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 601 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 660
Query: 681 SNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
SN+GS VIEKGG +GF+ E DS YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 661 SNIGSKVIEKGGGGLGFEFSGAGEADSQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 720
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LT+ EVKEIADI+LKEVF RL + I L+VT RF++R+V+EGYNPSYGARPLRRAIMRLL
Sbjct: 721 LTRDEVKEIADILLKEVFSRLTEQGITLEVTARFKDRLVDEGYNPSYGARPLRRAIMRLL 780
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
EDS+AE++L+ +KEGD+ IVDVD DG + VL G +
Sbjct: 781 EDSLAEEILSGRVKEGDTAIVDVDGDGQIKVLQGET 816
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|125534026|gb|EAY80574.1| hypothetical protein OsI_35755 [Oryza sativa Indica Group]
Length = 959
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/796 (73%), Positives = 669/796 (84%), Gaps = 35/796 (4%)
Query: 80 SGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVL 139
+GR G V M +FT A V+ +QEEA +LGHNY+GSEHLLLGLLRE G A VL
Sbjct: 164 AGRGPGMV--PMEIKFTPAAKNVLQASQEEAHQLGHNYVGSEHLLLGLLRE-HGAALVVL 220
Query: 140 ENLGADPSNIRTQVIRMVGESTE---AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKL 196
+N ADPSNIR++VIRM+ +++E V A VGGGSS K+PTL EYGTNLTKLAEEGKL
Sbjct: 221 KNFQADPSNIRSEVIRMISDTSEDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKL 280
Query: 197 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK-- 254
DPVVGRQ Q++RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+G+VP+TI+GK
Sbjct: 281 DPVVGRQNQVDRVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETIDGKTN 340
Query: 255 -------------------------KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 289
+VITLDMGLLVAGTKYRGEFEERLKKLM+E+KQ+
Sbjct: 341 LQFEHYEIAKSYLSRLPERKHGNPFQVITLDMGLLVAGTKYRGEFEERLKKLMDEVKQNG 400
Query: 290 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 349
EIILF+DEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGATT+DEYRKHIEKDPALER
Sbjct: 401 EIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALER 460
Query: 350 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 409
RFQPVKVPEP+VDETI ILKGLRERYEIHHK+RYTDE+L++AA+LSYQYISDRFLPDKAI
Sbjct: 461 RFQPVKVPEPTVDETIGILKGLRERYEIHHKVRYTDESLIAAARLSYQYISDRFLPDKAI 520
Query: 410 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 469
DL+DEAGS VRLR+AQLP+EA+ELEK+L++I EK+EA+R QDFEKAG LR E++LK++
Sbjct: 521 DLVDEAGSLVRLRNAQLPDEAKELEKKLKKIMAEKSEAIRSQDFEKAGALRGEEVELKSE 580
Query: 470 ISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 528
I +LVDK KEMSKA ++G+ GP VTE D+QHIVS+WTG+PVEKV+ DES RLL ME +
Sbjct: 581 IMSLVDKSKEMSKAAVDSGESPGPTVTEADVQHIVSSWTGVPVEKVTVDESSRLLAMESS 640
Query: 529 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 588
LH+R++GQDEAV AISRAIRRARVGL++P RPIASFIF+GPTGVGKSELAKALAAYY+GS
Sbjct: 641 LHRRIVGQDEAVTAISRAIRRARVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGS 700
Query: 589 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 648
EAM+RLDMSEFME+HTV+KL+GSPPGYVGY EGGQLTEA+RRRPY VVLFDE+EKAHPD
Sbjct: 701 PEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPD 760
Query: 649 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 708
VFNMMLQIL+DGRLTDSKGRTVDFKN+L+IMTSNVGS VIEKGGR++ D Y
Sbjct: 761 VFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTSNVGSGVIEKGGRQL-GFAGDGSGDGGY 819
Query: 709 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 768
IK++V EE+K+YFRPEFLNRLDEMIVFRQLTKLEVKEIA IML EV R+ K I LQ
Sbjct: 820 GVIKNMVEEEMKRYFRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQ 879
Query: 769 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 828
VTERF+E VVE+G++PSYGARPLRRAIMRLLED++ +KMLA EI GDSVIVD D DGNV
Sbjct: 880 VTERFKELVVEQGFDPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNV 939
Query: 829 TVLNGSSGAPESLADP 844
V+ S L P
Sbjct: 940 VVVGRRSAGLPDLKSP 955
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F+ FT+KAIK IM+AQEEARRLGH+ GSE LLLG++ EG G+ A+VL G R
Sbjct: 99 FDMFTDKAIKAIMMAQEEARRLGHHAAGSEQLLLGVIGEGTGIGAKVLRGAGLSLKAARA 158
Query: 152 QVIRMVG 158
+V +M G
Sbjct: 159 EVEKMAG 165
>gi|443316093|ref|ZP_21045553.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784324|gb|ELR94204.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 823
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/753 (74%), Positives = 660/753 (87%), Gaps = 9/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GGG K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SAGGGQGRTKTPTLDEFGSNLTQMAGEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI++GD+PD +E K+V+TLD
Sbjct: 183 GRQNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISTGDIPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILHGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LR DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LRIEDEALNAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQL 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+ AVR QDF++AGELRDREM++KA+I + +GK KAE+E GD PVVTE DI
Sbjct: 423 LKEKDNAVRSQDFDRAGELRDREMEIKAEIRTIA-QGK---KAESEDGDDSPVVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQDEAVKAISRAIRRARVGLK+PNRP
Sbjct: 479 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDEAVKAISRAIRRARVGLKSPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAK+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKN+LLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNSLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GFD + ++ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFDFEDNQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVK I+DI+L+E+F RL + I L+VTERF++R+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 719 TKDEVKSISDILLREIFGRLTEQGITLEVTERFKDRLVEEGYNPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
D++AE++L+ +K+G + VDVD G V + G
Sbjct: 779 DTLAEEILSGRLKDGSTATVDVDDQGKVMIQAG 811
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|125576822|gb|EAZ18044.1| hypothetical protein OsJ_33590 [Oryza sativa Japonica Group]
Length = 959
Score = 1143 bits (2956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/796 (72%), Positives = 669/796 (84%), Gaps = 35/796 (4%)
Query: 80 SGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVL 139
+GR G V M +FT A V+ +QEEA +LGHNY+GSEHLLLGLLRE G A VL
Sbjct: 164 AGRGPGMV--PMEIKFTPAAKNVLQASQEEAHQLGHNYVGSEHLLLGLLRE-HGAALVVL 220
Query: 140 ENLGADPSNIRTQVIRMVGESTE---AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKL 196
+N ADPSNIR++VIRM+ +++E V A VGGGSS K+PTL EYGTNLTKLAEEGKL
Sbjct: 221 KNFQADPSNIRSEVIRMISDTSEDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKL 280
Query: 197 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK-- 254
DPVVGRQ Q++RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+G+VP+TI+GK
Sbjct: 281 DPVVGRQNQVDRVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETIDGKTN 340
Query: 255 -------------------------KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 289
+VITLDMGLLVAGTKYRGEFEERLKKLM+E+KQ+
Sbjct: 341 LQFEHYEIAKSYLSRLPERKHGNPFQVITLDMGLLVAGTKYRGEFEERLKKLMDEVKQNG 400
Query: 290 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 349
EIILF+DEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGATT+DEYRKHIEKDPALER
Sbjct: 401 EIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALER 460
Query: 350 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 409
RFQPVKVPEP+VDETI ILKGLRERYEIHHK++YTDE+L++AA+LSYQYISDRFLPDKAI
Sbjct: 461 RFQPVKVPEPTVDETIGILKGLRERYEIHHKVQYTDESLIAAARLSYQYISDRFLPDKAI 520
Query: 410 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 469
DL+DEAGS VRLR+AQLP+EA+ELEK+L++I EK+EA+R QDFEKAG LR E++LK++
Sbjct: 521 DLVDEAGSLVRLRNAQLPDEAKELEKKLKKIMAEKSEAIRSQDFEKAGALRGEEVELKSE 580
Query: 470 ISALVDKGKEMSKAETEAGDV-GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 528
I +LVDK KEMSKA ++G+ GP VTE D+QHIVS+WTG+PVEKV+ DES RLL ME +
Sbjct: 581 IMSLVDKSKEMSKAAVDSGESPGPTVTEADVQHIVSSWTGVPVEKVTVDESSRLLAMESS 640
Query: 529 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 588
LH+R++GQDEAV AISRAIRRARVGL++P RPIASFIF+GPTGVGKSELAKALAAYY+GS
Sbjct: 641 LHRRIVGQDEAVTAISRAIRRARVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGS 700
Query: 589 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 648
EAM+RLDMSEFME+HTV+KL+GSPPGYVGY EGGQLTEA+RRRPY VVLFDE+EKAHPD
Sbjct: 701 PEAMVRLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPD 760
Query: 649 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 708
VFNMMLQIL+DGRLTDSKGRTVDFKN+L+IMTSNVGS VIEKGGR++ D Y
Sbjct: 761 VFNMMLQILDDGRLTDSKGRTVDFKNSLIIMTSNVGSGVIEKGGRQL-GFAGDGSGDGGY 819
Query: 709 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 768
IK++V EE+K+YFRPEFLNRLDEMIVFRQLTKLEVKEIA IML EV R+ K I LQ
Sbjct: 820 GVIKNMVEEEMKRYFRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQ 879
Query: 769 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNV 828
VTERF+E VVE+G++PSYGARPLRRAIMRLLED++ +KMLA EI GDSVIVD D DGNV
Sbjct: 880 VTERFKELVVEQGFDPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNV 939
Query: 829 TVLNGSSGAPESLADP 844
V+ S L P
Sbjct: 940 VVVGRRSAGLPDLKSP 955
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F+ FT+KAIK IM+AQEEARRLGH+ GSE LLLG++ EG G+ A+VL G R
Sbjct: 99 FDMFTDKAIKAIMMAQEEARRLGHHAAGSEQLLLGVIGEGTGIGAKVLRGAGLSLKAARA 158
Query: 152 QVIRMVG 158
+V +M G
Sbjct: 159 EVEKMAG 165
>gi|354567441|ref|ZP_08986610.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
gi|353542713|gb|EHC12174.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
Length = 851
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/750 (74%), Positives = 658/750 (87%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 97 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 154
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
N+G D S +RTQVIRM+GE+ E GG S GNK PTL+E+G+NLT++A +GKLDPVV
Sbjct: 155 NVGVDLSKVRTQVIRMLGETAEVTQ---GGPSRGNKTPTLDEFGSNLTQMALDGKLDPVV 211
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD
Sbjct: 212 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTLD 271
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 272 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 331
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL+GLR+RYE HHK
Sbjct: 332 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILRGLRDRYEQHHK 391
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL++AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQI
Sbjct: 392 LKISDEALIAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRQI 451
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF++AGELRDREM++KA+I A+ +AE E PVVTE DI
Sbjct: 452 LKEKDDAVRAQDFDRAGELRDREMEIKAEIRAIAQSKTGTGRAEGEE----PVVTEEDIA 507
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 508 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 567
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAKALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 568 IASFVFSGPTGVGKTELAKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 627
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 628 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 687
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG IGF+ D+ +S YNRIK LV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 688 SNIGSKVIEKGGGGIGFEFAEDQSESQYNRIKFLVNEELKNYFRPEFLNRLDEIIVFRQL 747
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EV +IADIML+EVF RL K I L+V++RF+ER+++EGYNPSYGARPLRRAIMRLLE
Sbjct: 748 NKEEVMQIADIMLREVFGRLTEKGINLEVSDRFKERLLQEGYNPSYGARPLRRAIMRLLE 807
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE++L+ IKEGD+ IVDVD GN+ V
Sbjct: 808 DSLAEEILSGRIKEGDTAIVDVDESGNIAV 837
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 61/72 (84%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + +
Sbjct: 29 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 88
Query: 150 RTQVIRMVGEST 161
R +V +++G +
Sbjct: 89 RIEVEKIIGRGS 100
>gi|427714632|ref|YP_007063256.1| chaperone ATPase [Synechococcus sp. PCC 6312]
gi|427378761|gb|AFY62713.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 6312]
Length = 824
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/753 (75%), Positives = 656/753 (87%), Gaps = 11/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG G + K PTL+E+G+NLT++A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VAAGSSSGRT--KTPTLDEFGSNLTQMAIDGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD ++ K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILQEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEKHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DE+L +AA+L+ +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKILDESLEAAAKLADRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDI 499
K+K++AVR QDF+KAGELRD+EMDLKAQI + + K+ET D PVVTE DI
Sbjct: 423 LKDKDDAVRAQDFDKAGELRDKEMDLKAQIRNI----SQQKKSETTTDEDKSPVVTEEDI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIVS+WTG+P+ K++ ES++LL ME+TLH+RVIGQDEAVKAISRAIRRARVGLKNPNR
Sbjct: 479 AHIVSSWTGVPLSKLTETESEKLLHMEDTLHQRVIGQDEAVKAISRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIM
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIM 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
TSN+GS VIEKG +GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 659 TSNIGSKVIEKGAGGLGFEFASDNPAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFR 718
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK EVKEIADI+LKEVF RL ++I L VT+RF+ER+++EGYNPSYGARPLRRAIMRL
Sbjct: 719 QLTKDEVKEIADILLKEVFTRLTERNITLTVTDRFKERLIDEGYNPSYGARPLRRAIMRL 778
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
LEDS+AE++L +KEG + +VDVD G V VL
Sbjct: 779 LEDSLAEELLTGRMKEGATAVVDVDESGQVKVL 811
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|158335106|ref|YP_001516278.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
gi|158305347|gb|ABW26964.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
Length = 822
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/750 (74%), Positives = 652/750 (86%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E GGG K PTL+E+G NLT LA EGKLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEV---SAGGGQGRTKTPTLDEFGANLTNLASEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L DE+L +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR++
Sbjct: 363 LSILDESLEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRKV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF+KAGELRDREM++K++I A+ + K+ E D P VTE DI
Sbjct: 423 LKDKDDAVRSQDFDKAGELRDREMEIKSEIKAIA----QNKKSSEENKDDSPKVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQDEAV+AISRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVSKLTESESEKLLHMEDTLHQRLIGQDEAVRAISRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ DE DS YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFEFAEDEADSQYNRIRSLVNEELKGYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVKEI++++LKEVF RL+ K I L +T+RF+ER+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 719 TKDEVKEISELLLKEVFSRLEEKSITLNITDRFKERLVEEGYNPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D++AE++L+ +KEGD+ IVDVD D V +
Sbjct: 779 DTLAEEILSGRVKEGDTAIVDVDEDQQVKI 808
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|359457125|ref|ZP_09245688.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris sp.
CCMEE 5410]
Length = 822
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/750 (74%), Positives = 651/750 (86%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E GGG K PTL+E+G NLT LA EGKLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEV---SAGGGQGRTKTPTLDEFGANLTNLASEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L DE+L +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR++
Sbjct: 363 LSILDESLEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRKV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF+KAGELRDREM++K++I A+ + K+ + D P VTE DI
Sbjct: 423 LKDKDDAVRSQDFDKAGELRDREMEIKSEIKAIA----QNKKSSEDNKDDSPKVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQDEAV+AISRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVSKLTESESEKLLHMEDTLHQRLIGQDEAVRAISRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ DE DS YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFEFAEDEADSQYNRIRSLVNEELKGYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEI++++LKEVF RL+ K I L +TERF+ER+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 719 NKDEVKEISELLLKEVFVRLEEKSITLNITERFKERLVEEGYNPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D++AE++L+ +KEGD+ IVDVD D V +
Sbjct: 779 DTLAEEILSGRVKEGDTAIVDVDEDQQVKI 808
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|113476064|ref|YP_722125.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167112|gb|ABG51652.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/753 (74%), Positives = 657/753 (87%), Gaps = 9/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E V AG GGG + K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLTKVRTQVIRMLGETAE-VTAGGGGGRT--KTPTLDEFGSNLTQMASEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD
Sbjct: 183 GRQTEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ D AL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR I
Sbjct: 363 LKILDTALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRSI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+EAVR QDF+KAGELRDREM++K++I +L K S E D P+VTE DI
Sbjct: 423 LKEKDEAVRSQDFDKAGELRDREMEIKSEIRSLAQNKKLDSTNE----DDSPMVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ +E D+ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFEFSENEADAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVKEI+ I+LKEVF RL K I+L++T+RF+ER+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 719 TKDEVKEISVILLKEVFSRLTEKGIKLEITDRFQERLVEEGYNPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++LA +I EGD+ +VDV G + V G
Sbjct: 779 DSLAEEILAGKINEGDTAVVDVGESGQIIVSKG 811
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|334118189|ref|ZP_08492279.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428317617|ref|YP_007115499.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|333460174|gb|EGK88784.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428241297|gb|AFZ07083.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 825
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/753 (74%), Positives = 655/753 (86%), Gaps = 6/753 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E A GGG+ K PTL+E+G NLT++A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV--AATGGGAR-TKTPTLDEFGANLTQMAVDGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRTAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILFGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ D AL +AA+LS++YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKILDTALEAAAKLSHRYISDRFLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K+EAVR QDF+KAGELRDREM +KA+I A + + K+ A T D PVVTE DI
Sbjct: 423 LKDKDEAVRSQDFDKAGELRDREMTIKAEIRA-ISQAKKTDSARTGETDPSPVVTEEDIA 481
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRP
Sbjct: 482 QIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRP 541
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 542 IASFIFSGPTGVGKTELTKALAGYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 601
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 602 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 661
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ ++ D++YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 662 SNIGSKVIEKGGGGLGFEFSDNQADANYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQL 721
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEIA IMLKEVF RL + I L+VTE+F+ER+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 722 NKEEVKEIAVIMLKEVFGRLTEQGITLEVTEKFKERLVEEGYNPSYGARPLRRAIMRLLE 781
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++L+ IK+GD+ +VDV DG V VL G
Sbjct: 782 DSLAEEILSGRIKDGDTAVVDVGEDGIVKVLQG 814
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|119487029|ref|ZP_01620901.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455958|gb|EAW37092.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 825
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/754 (74%), Positives = 654/754 (86%), Gaps = 10/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG G S K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VTAGASG--SRTKTPTLDEFGSNLTQMAAEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIAQNDIPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV ET++IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVSETVEILYGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKIMDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDI 499
KEK+++VR QDF++AGELRDREM +K+QI + + K+ET D P+VTE DI
Sbjct: 423 LKEKDDSVRSQDFDRAGELRDREMKIKSQIREIA----QTKKSETNTTEDDSPMVTEEDI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTGIPV K++ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNR
Sbjct: 479 AHIVASWTGIPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALA Y+FGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFIFSGPTGVGKTELTKALATYFFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IM
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIM 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ +E D+ Y+RI++LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 659 TSNIGSKVIEKGGGGLGFEFSENESDAQYHRIRNLVNEELKQYFRPEFLNRLDEIIVFRQ 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTK EVKEIA IML EVF RL K I+L++T+RF ER+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 719 LTKDEVKEIAVIMLNEVFSRLTEKGIKLEITDRFNERLVEEGYNPSYGARPLRRAIMRLL 778
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
EDS+AE++L+ I EGD+ +VDVD DG VTV G
Sbjct: 779 EDSLAEEILSGRITEGDTAVVDVDGDGQVTVAQG 812
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|254414473|ref|ZP_05028239.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196178703|gb|EDX73701.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 824
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/762 (74%), Positives = 660/762 (86%), Gaps = 12/762 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E G SSG K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLTKVRTQVIRMLGETAEVTS----GASSGRTKTPTLDEFGSNLTQMAGEGKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 182 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRQAANVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKILDEALDAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK++AVR QDF++AGELRDREM++K +I A+ KAET D PVV E DI
Sbjct: 422 VLKEKDDAVRSQDFDRAGELRDREMEIKGEIRAIAQN----KKAETGTDD-SPVVDEEDI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVSKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+ELAK+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+L +E +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFELSDNEAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTK E+KEI DI+L+EVF RL K I L+VT+RF+ER+VEEGY+PSYGARPLRRAIMRLL
Sbjct: 717 LTKDEIKEICDILLREVFKRLTEKGITLEVTDRFKERLVEEGYSPSYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESL 841
ED +AE++L+ ++EGDS IVDVD +G V V+ G G L
Sbjct: 777 EDVLAEEILSTRLQEGDSAIVDVDEEGKVKVIPGEPGEQREL 818
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|17230491|ref|NP_487039.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 839
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/750 (74%), Positives = 655/750 (87%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 84 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 141
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G G + K PTL+E+G+NLT++A + KLDPVV
Sbjct: 142 NLGVDLSKVRTQVIRMLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVV 198
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 199 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLD 258
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 259 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 318
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 319 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHK 378
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 379 LKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKELDKELRQI 438
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF++AGELRDREM++KA+I A+ S E + PVVTE DI
Sbjct: 439 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTEGQE----PVVTEEDIA 494
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 495 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 554
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 555 IASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 614
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 615 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 674
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG IGF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 675 SNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 734
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+KLEV EIADIMLKEVF RL K I L+V++RF+ R++EEGY+PSYGARPLRRAIMRLLE
Sbjct: 735 SKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRRAIMRLLE 794
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE++L+ IK+GD ++D+D +GNV V
Sbjct: 795 DSLAEEILSGRIKDGDVALIDIDENGNVQV 824
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 61/72 (84%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + +
Sbjct: 16 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 75
Query: 150 RTQVIRMVGEST 161
R +V +++G +
Sbjct: 76 RIEVEKIIGRGS 87
>gi|298492878|ref|YP_003723055.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298234796|gb|ADI65932.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 824
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/752 (74%), Positives = 657/752 (87%), Gaps = 12/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGGSSG K PTL+E+G+NLT++A + KLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SPGGGSSGRTKTPTLDEFGSNLTQMATDNKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TL
Sbjct: 183 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +DEALV+AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVD 498
I KEK++AVR QDF++AGELRDREM++KA+I + +K GD V PVVTE D
Sbjct: 423 ILKEKDDAVRSQDFDRAGELRDREMEIKAEIRTIA-----QTKTNAAGGDGVEPVVTEED 477
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQD+AVKA+SRAIRRARVGLKNPN
Sbjct: 478 IAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDDAVKAVSRAIRRARVGLKNPN 537
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 538 RPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVG 597
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI
Sbjct: 598 YNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLI 657
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
+TSN+GS VIEKGG IGF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 658 LTSNIGSKVIEKGGSGIGFEFAEDATESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFR 717
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QL KLEV +IA+IMLKEVF RL K I L+V++RF+ER+V+EGY+PSYGARPLRRAIMRL
Sbjct: 718 QLNKLEVTQIAEIMLKEVFGRLTEKGITLEVSDRFKERLVQEGYSPSYGARPLRRAIMRL 777
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
LEDS+AE++L+ IK+GD+ +VDVD +G V V
Sbjct: 778 LEDSLAEEILSGRIKDGDTALVDVDENGIVQV 809
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|434393419|ref|YP_007128366.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428265260|gb|AFZ31206.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 825
Score = 1134 bits (2932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/752 (74%), Positives = 658/752 (87%), Gaps = 9/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G SG K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SAGSSQSGRTKTPTLDEFGSNLTQMAAEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ D+PD +E K+V+TL
Sbjct: 183 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +DEALV+AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKISDEALVAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK++AVR QDF++AGELRDREM++KA+I A+ + K S E E + PVVTE DI
Sbjct: 423 VLKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIA-QSKTTSTREGE--NDSPVVTEEDI 479
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+S+AIRRARVGLKNPNR
Sbjct: 480 AQIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSKAIRRARVGLKNPNR 539
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 540 PIASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 599
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 600 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 659
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 660 TSNIGSKVIEKGGGGLGFEFAENQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 719
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTK EVK+I+DI+LKEVF RL K I L+VT+RF+ER+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 720 LTKDEVKQISDILLKEVFVRLTEKGITLEVTDRFKERLVEEGYNPSYGARPLRRAIMRLL 779
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
EDS+AE++L+ IK+GD+ +VDVD GNV VL
Sbjct: 780 EDSLAEEILSGRIKDGDTAVVDVDDTGNVKVL 811
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|428774264|ref|YP_007166052.1| ATPase [Cyanobacterium stanieri PCC 7202]
gi|428688543|gb|AFZ48403.1| ATPase AAA-2 domain protein [Cyanobacterium stanieri PCC 7202]
Length = 824
Score = 1134 bits (2932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/750 (74%), Positives = 658/750 (87%), Gaps = 8/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D +RTQVIRM+GE TE+ G GGGS NK PTL+E+G+NLT LA EGKLDPVV
Sbjct: 126 NLGVDLGKVRTQVIRMLGE-TESAPVGAGGGSRSNKTPTLDEFGSNLTNLATEGKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD
Sbjct: 185 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIGNKDVPDLLEDKRVVTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D AL RRFQPV V EPSVDETI+IL GLRERYE HHK
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALARRFQPVMVGEPSVDETIEILFGLRERYEQHHK 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELRQ+
Sbjct: 365 LKISDEALDAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPAEAKELDKELRQV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+EAVR QDF+KAGELRDREM++K +I L D+ K+ PVV E +I
Sbjct: 425 LKEKDEAVRSQDFDKAGELRDREMEIKTEIRGLADQKKQNPDVSD-----NPVVNEEEIA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV+K++ ES++LL ME+TLH+R+IGQ++AVKAISRAIRRARVGLKNPNRP
Sbjct: 480 QIVASWTGVPVQKLTESESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGSE++MIRLDMSE+MERHTVSKLIGSPPGYVGY+
Sbjct: 540 IASFIFSGPTGVGKTELTKALATYFFGSEDSMIRLDMSEYMERHTVSKLIGSPPGYVGYS 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 600 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRTVDFKNTLLIMT 659
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 660 SNIGSKVIEKGGGGLGFELEDDQTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQL 719
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEI++++LKEVF RL ++I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLLE
Sbjct: 720 NKEEVKEISELLLKEVFARLTEQEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLE 779
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D +AE++L++ +KEGD+ +VDV+ +G VT+
Sbjct: 780 DVLAEEILSKRLKEGDTALVDVNEEGKVTI 809
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+ +G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKPMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|427734429|ref|YP_007053973.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427369470|gb|AFY53426.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 831
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/750 (74%), Positives = 653/750 (87%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G G NK PTL+E+G+NLT++A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTATGQSGR---NKTPTLDEFGSNLTQMALDGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIGNKDVPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEA+++AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR+I
Sbjct: 363 LKISDEAVLAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRKI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF+KAGELRDREM++KA+I A+ S A E PVVTE DI
Sbjct: 423 LKEKDDAVRSQDFDKAGELRDREMEIKAEIRAIAQSKAGTSGANGEE----PVVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG IGF+ D +S YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGIGFEFAEDASESQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+ EV IADIMLKEVF RL K I+L+V++RF+ER+++EGYNPSYGARPLRRAIMRLLE
Sbjct: 719 NREEVMLIADIMLKEVFGRLTEKGIKLEVSDRFKERLLQEGYNPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE++L+ I EGD+ IVDVD GN+ V
Sbjct: 779 DSLAEEILSGRIGEGDTAIVDVDEGGNILV 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|428223959|ref|YP_007108056.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983860|gb|AFY65004.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/753 (74%), Positives = 651/753 (86%), Gaps = 9/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GG K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---STGGSQGRTKTPTLDEFGSNLTQMAAEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANADVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVQETIEILHGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+
Sbjct: 363 LKISDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+EAVR QDF++AGELRDREM++KA+I ++ K E + P VTE DI
Sbjct: 423 LKEKDEAVRSQDFDRAGELRDREMEIKAEIRSIAQN----RKNEGGTTEDSPFVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES++LL ME+TLH R+IGQDEAVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 QIVASWTGVPVNKLTESESEKLLHMEDTLHNRLIGQDEAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELTKALASYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D+ DS YNRI+SLV EELKQYFRPEFLNR+DE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFEFAEDQADSQYNRIRSLVNEELKQYFRPEFLNRVDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEIADIML EVF RL + I L+VTERF++R+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 719 KKDEVKEIADIMLHEVFGRLGEQGIVLEVTERFKDRLVEEGYNPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++L+ I+EGD+ +VDVD +G V VL G
Sbjct: 779 DSLAEEILSGRIQEGDTAVVDVDEEGQVKVLPG 811
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|22297851|ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
Length = 824
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/752 (76%), Positives = 658/752 (87%), Gaps = 11/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG G + K PTL+E+G NLT+LA EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VTAGASQGRT--KTPTLDEFGVNLTQLAIEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEKHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+
Sbjct: 363 LKISDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDI 499
KEK++AVR Q+F+KAGELRDREM+LKAQI A+ + KAE G + PVVTE DI
Sbjct: 423 LKEKDDAVRAQNFDKAGELRDREMELKAQIRAIA----QQKKAEIANGEEETPVVTEEDI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL MEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNR
Sbjct: 479 AHIVASWTGVPVSKLTESESEKLLHMEETLHQRVIGQDEAVKAISRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIM
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIM 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
TSN+GS VIEKG +GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 659 TSNIGSKVIEKGAAGLGFEFGTEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFR 718
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK EVK+IADI+LKEVF RL K I L+VTERF+ER+++EGYNPSYGARPLRRAIMRL
Sbjct: 719 QLTKDEVKQIADILLKEVFSRLTEKGITLEVTERFKERLIDEGYNPSYGARPLRRAIMRL 778
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
LED++AE+ML+ I+EGD+ ++DVD G V +
Sbjct: 779 LEDTLAEEMLSGRIREGDTALIDVDESGQVKI 810
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 59/71 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL ++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|75907133|ref|YP_321429.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75700858|gb|ABA20534.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 823
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/750 (73%), Positives = 654/750 (87%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G G + K PTL+E+G+NLT++A + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 363 LKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF++AGELRDREM++KA+I A+ S E + PVVTE DI
Sbjct: 423 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTEGQE----PVVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG IGF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+K EV EIADIMLKEVF RL K I L+V++RF+ R++EEGY+PSYGARPLRRAIMRLLE
Sbjct: 719 SKAEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE++L+ IK+GD ++D+D +GNV V
Sbjct: 779 DSLAEEILSGRIKDGDVALIDIDDNGNVQV 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|186686024|ref|YP_001869220.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186468476|gb|ACC84277.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 822
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/750 (74%), Positives = 654/750 (87%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GG S K PTL+E+G+NLT++A + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SPGGSSGRTKTPTLDEFGSNLTQMAIDNKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIATKDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 363 LKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF+KAGELRDREM++KA+I A+ + E E PVVTE DI
Sbjct: 423 LKEKDDAVRSQDFDKAGELRDREMEIKAEIRAIAQSKTNATGTEGEE----PVVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQDEAV+A+SRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDEAVRAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAK+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG IGF+ D +S+YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGSGIGFEFSEDASESTYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+K EV +IA+IMLKEVF RL K I L+VT+RF++R+++EGY+PSYGARPLRRAIMRLLE
Sbjct: 719 SKPEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKDRLIQEGYSPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE++L+ IK+GD+ +VDVD +G V V
Sbjct: 779 DSLAEEILSGRIKDGDTALVDVDENGVVQV 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|427706010|ref|YP_007048387.1| ATPase [Nostoc sp. PCC 7107]
gi|427358515|gb|AFY41237.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 823
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/751 (74%), Positives = 654/751 (87%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G G + K PTL+E+G+NLT++A + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL++AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 363 LKISDEALIAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDI 499
KEK++AVR QDF++AGELRDREM++KA+I A+ SK +GD V PVVTE DI
Sbjct: 423 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIA-----QSKTNGASGDGVEPVVTEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 478 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 598 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKG IGF+ D +S YNRIK+LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGASTIGFEFTEDAGESQYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L + EV +IADIMLKEVF RL K I L+VTERF++R+++EGY+PSYGARPLRRAIMRLL
Sbjct: 718 LNREEVTQIADIMLKEVFGRLTEKGITLEVTERFKDRLIQEGYSPSYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE++L+ IK+GD+ +VDVD +G V V
Sbjct: 778 EDSLAEEILSGRIKDGDTAVVDVDENGTVQV 808
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|428210348|ref|YP_007094701.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428012269|gb|AFY90832.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 824
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/753 (74%), Positives = 657/753 (87%), Gaps = 9/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG G + K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VSAGSQSGRT--KTPTLDEFGSNLTQMAGEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 183 GREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILFGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +D AL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKISDAALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF++AGELRDREM+L+A+I A+ +K+E GD PVVTE DI
Sbjct: 423 LKEKDDAVRTQDFDRAGELRDREMELRAEIRAIAQSKTGTTKSE---GDDSPVVTEEDIA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ+EAV+A+S+AIRRARVGLKNPNRP
Sbjct: 480 QIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVRAVSKAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL K+LAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 540 IASFVFSGPTGVGKTELTKSLAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+I+T
Sbjct: 600 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIILT 659
Query: 681 SNVGSSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
SN+GS VIEKGG IGF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 660 SNIGSKVIEKGGGGIGFEFSSEDAAETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 719
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L+K EVKEIADIMLKEVF RL K I L VTERF++R+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 720 LSKAEVKEIADIMLKEVFGRLTEKGITLTVTERFKDRLVEEGYNPSYGARPLRRAIMRLL 779
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 832
EDS+AE++L+ IKEGD +VDVD GNV VL+
Sbjct: 780 EDSLAEEILSGRIKEGDEAVVDVDDTGNVKVLS 812
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 59/71 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+ +G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKTMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|428220165|ref|YP_007104335.1| chaperone ATPase [Synechococcus sp. PCC 7502]
gi|427993505|gb|AFY72200.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 7502]
Length = 828
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/759 (74%), Positives = 658/759 (86%), Gaps = 10/759 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG GGG + K PTL+E+G+NLT+LA EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VSAGGGGGRT--KTPTLDEFGSNLTQLAMEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI SGD+PD ++ K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRITSGDIPDILQDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ S+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSSNNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILFGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +D A+ +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKISDLAIDAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDKELRQL 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF+KA +LRDRE+++K +I L + KAET DV PVVTE DI
Sbjct: 423 LKDKDDAVRSQDFDKAAKLRDRELEIKQEIRNL----SQAKKAETTKDDVVPVVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTG+PV K++ ES +L++MEETLH+R+IGQ+EAVKA SRAIRRARVGLKNPNRP
Sbjct: 479 HIVSSWTGVPVSKLTESESLKLMQMEETLHQRLIGQEEAVKATSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSEEAM+RLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELTKALAAYFFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTL+IMT
Sbjct: 599 EGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLIIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GFD D+ DS+Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFDFAEDQADSAYTRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
E++EIA++ML EV+ RLK K+I L VTERF++ +V EGYN SYGARPLRRAIMRLLE
Sbjct: 719 KIEEIREIAELMLNEVYKRLKEKNITLAVTERFKDLLVREGYNQSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG-AP 838
DS++E++L ++++G SVIVDVD DG V + S AP
Sbjct: 779 DSLSEEILTGKVRDGASVIVDVDDDGKVICVEQPSAIAP 817
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|332706083|ref|ZP_08426155.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332355175|gb|EGJ34643.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 822
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/750 (73%), Positives = 659/750 (87%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG G + K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VTAGASQGRT--KTPTLDEFGSNLTQMASEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD
Sbjct: 183 GREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQASNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKISDEALEAAANLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF++AGELRDREM++KA+I ++ + K+E+ D P+V E DI
Sbjct: 423 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRSIA----QSKKSESRGTDESPIVDEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV+K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVQKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAK+LAAY+FGSEEAM+RLDMSE+MERHTVSKL+GSPPGYVGY
Sbjct: 539 IASFVFSGPTGVGKTELAKSLAAYFFGSEEAMVRLDMSEYMERHTVSKLVGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDSKGRTVDFKNTLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG ++GF+ ++ +S YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGQLGFEFSDNQAESQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVK+IA I+LKEVF RL + I L+V+E+F++R++EEGYNPSYGARPLRRAIMRLLE
Sbjct: 719 TKEEVKDIAKILLKEVFGRLYEQGITLEVSEKFKDRLIEEGYNPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D +AE++L+ IKEGD VDV+ +G V V
Sbjct: 779 DVLAEEILSSRIKEGDIAYVDVNEEGKVQV 808
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|428203900|ref|YP_007082489.1| chaperone ATPase [Pleurocapsa sp. PCC 7327]
gi|427981332|gb|AFY78932.1| ATPase with chaperone activity, ATP-binding subunit [Pleurocapsa
sp. PCC 7327]
Length = 821
Score = 1130 bits (2922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/753 (73%), Positives = 658/753 (87%), Gaps = 10/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E + G K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEV--STTPGAQGRTKTPTLDEFGSNLTQMASEGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD
Sbjct: 184 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEEKRVVTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V+ETI+IL GLRERYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVEETIEILYGLRERYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 364 LKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQI 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF++AGELRDREM++K+QI A+ SK GD PVVT +I
Sbjct: 424 LKQKDDAVRAQDFDRAGELRDREMEIKSQIRAIAS-----SKKNEGEGD-EPVVTAEEIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 478 NIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 IASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 598 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG R+GF+ + D+ ++ YNRI+SLV EELKQYFRPEFLNR+DE+IVFRQL
Sbjct: 658 SNIGSKVIEKGGDRLGFEFEVDQAEAQYNRIRSLVNEELKQYFRPEFLNRIDEIIVFRQL 717
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVK+IADI+LK+VF RL ++I L+VTE+F+ER+VEEGYNP+YGARPLRRAIMRLLE
Sbjct: 718 TKEEVKQIADILLKQVFARLTEQNINLEVTEKFKERLVEEGYNPAYGARPLRRAIMRLLE 777
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
D +AE++L+ I+EGD+ + D+D +G V ++ G
Sbjct: 778 DVLAEEILSGRIQEGDTAVADIDEEGKVKIVLG 810
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|411117307|ref|ZP_11389794.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410713410|gb|EKQ70911.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 822
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/756 (74%), Positives = 657/756 (86%), Gaps = 15/756 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGS G K PTL+E+G+NLT+LA EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTS----GGSQGRTKTPTLDEFGSNLTQLAAEGKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TL
Sbjct: 182 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANDDVPDILEEKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL+GLRERYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILRGLRERYEQHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +D AL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKISDVALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV-DKGKEMSKAETEAGDVGPVVTEVD 498
+ KEK++AVR Q+F++AG LRDREM++KA+I A+ +K E S ET PVVTE D
Sbjct: 422 VLKEKDDAVRSQNFDRAGALRDREMEIKAEIRAIAQNKKTESSSDET------PVVTEED 475
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I IV++WTG+PV K++ ES++LL ME+TLH+R+IGQDEAV+A+SRAIRRARVGLKNPN
Sbjct: 476 IAQIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDEAVRAVSRAIRRARVGLKNPN 535
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 536 RPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVG 595
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI
Sbjct: 596 YNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLI 655
Query: 679 MTSNVGSSVIEKGGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
MTSN+GS VIEKGG +GFD +E++S YNRI+SLV EELKQYFRPEFLNR+DE+IVF
Sbjct: 656 MTSNIGSKVIEKGGGGLGFDFTSENEEESQYNRIRSLVNEELKQYFRPEFLNRVDEIIVF 715
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
RQL K EVKEIADIML EVF RL+ + I L+VTE+F++R+VEEGYNPSYGARPLRRAIMR
Sbjct: 716 RQLKKDEVKEIADIMLNEVFGRLREQGIVLEVTEKFKDRLVEEGYNPSYGARPLRRAIMR 775
Query: 798 LLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
LLEDS+AE++L+ + +GD+ +VDVD G V V G
Sbjct: 776 LLEDSLAEEILSGRVNDGDTAVVDVDESGQVVVRPG 811
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|428313889|ref|YP_007124866.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428255501|gb|AFZ21460.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 822
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/754 (74%), Positives = 652/754 (86%), Gaps = 11/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E G S G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLTKVRTQVIRMLGETAEVTS----GASQGRTKTPTLDEFGSNLTQMAGEGKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TL
Sbjct: 182 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEEKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ D AL +AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKILDSALEAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK++AVR QDF++AGELRDREM++KA+I A+ + K + + D GPVV E DI
Sbjct: 422 VLKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIA----QSKKTDERSDDPGPVVDEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNR
Sbjct: 478 AQIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 598 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG IGF+ ++ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGGGGIGFEFSENQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L + EVKEIADIMLKEVF RL + I L+VTERF++R+VEEGYNP+YGARPLRRAIMRLL
Sbjct: 718 LNRDEVKEIADIMLKEVFGRLNEQGITLEVTERFKDRLVEEGYNPAYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L IK+GD VDVD G V VL G
Sbjct: 778 EDVLAEQILGGHIKDGDIATVDVDDSGTVKVLPG 811
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|282900556|ref|ZP_06308498.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281194356|gb|EFA69311.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 823
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/763 (73%), Positives = 659/763 (86%), Gaps = 13/763 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGSSG K PTL+E+G+NLT++A + KLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTP----GGSSGRTKTPTLDEFGSNLTQMAVDNKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TL
Sbjct: 182 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEAHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +DEALV+AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I KEK++AVR QDF++AGELRDREM++KA+I ++ + AE V PVVTE DI
Sbjct: 422 ILKEKDDAVRSQDFDRAGELRDREMEIKAEIRSIAQNKANGTSAE----GVEPVVTEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 478 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 598 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG IGF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGGSGIGFEFAEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EV EIADIMLKEVF RL K I L+V++RF++R+++EGY+PSYGARPLRRAIMRLL
Sbjct: 718 LNKAEVTEIADIMLKEVFGRLTEKGIALEVSDRFKDRLIQEGYSPSYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
EDS+AE++L+ IK+GD VD+D +G V V + PE LA
Sbjct: 778 EDSLAEEILSGRIKDGDIAYVDIDENGVVQVT--ARQRPELLA 818
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|434396958|ref|YP_007130962.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
gi|428268055|gb|AFZ33996.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
Length = 822
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/752 (73%), Positives = 655/752 (87%), Gaps = 10/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G G+ G NK PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GSGTQGRNKTPTLDEFGSNLTQMASEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR+
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRE 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ K+K++AVR QDF++AGELRDREM++K +I ++ K E + GD PVV +I
Sbjct: 423 VLKQKDDAVRAQDFDRAGELRDREMEIKEEIRSIASN----KKTEEDGGDDSPVVDAEEI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKAISRAIRRARVGLKNPNR
Sbjct: 479 AHIVASWTGVPVNKITESESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFVFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIIL 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQ
Sbjct: 659 TSNIGSKVIEKGGGGLGFEFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQ 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L+K EVKEI++++LKEVF RL +DI L+VTE+F+ER+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 719 LSKDEVKEISELLLKEVFTRLTEQDITLEVTEKFKERLVEEGYNPSYGARPLRRAIMRLL 778
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
ED +AE++L+ + EGD+ VD+DS+G V ++
Sbjct: 779 EDVLAEEILSGRLGEGDTAQVDIDSEGKVKII 810
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|282896301|ref|ZP_06304323.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
gi|281198797|gb|EFA73676.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
Length = 823
Score = 1127 bits (2915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/751 (74%), Positives = 654/751 (87%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGSSG K PTL+E+G+NLT++A + KLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTP----GGSSGRTKTPTLDEFGSNLTQMAVDNKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TL
Sbjct: 182 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEAHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +DEALV+AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I KEK++AVR QDF++AGELRDREM++KA+I ++ + AE V PVVTE DI
Sbjct: 422 ILKEKDDAVRSQDFDRAGELRDREMEIKAEIRSIAQNKANGTSAE----GVEPVVTEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 478 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 598 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG IGF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGGSGIGFEFAEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EV EIADIMLKEVF RL K I L+V++RF++R+++EGY+PSYGARPLRRAIMRLL
Sbjct: 718 LNKAEVTEIADIMLKEVFGRLTEKGIALEVSDRFKDRLIQEGYSPSYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE++L+ IK+GD VD+D +G V V
Sbjct: 778 EDSLAEEILSGRIKDGDIAYVDIDENGVVQV 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|303288740|ref|XP_003063658.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454726|gb|EEH52031.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 839
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/757 (75%), Positives = 666/757 (87%), Gaps = 6/757 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ LA EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELALEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG--NKMPTLEEYGTNLTKLAEEGKLDP 198
NL ADPS IR+QVIRMVGES EAVGA G G + +K PTLEE+G++LTK AEE KLDP
Sbjct: 126 NLDADPSKIRSQVIRMVGESQEAVGAAPGAGGAAGGSKTPTLEEFGSDLTKQAEEAKLDP 185
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
+GR ++ RV QILGRRTKNNPCLIGEPGVGK++IAEGLAQ+IA+ DVP+T+EGK+++T
Sbjct: 186 CIGRVTEMTRVTQILGRRTKNNPCLIGEPGVGKSSIAEGLAQKIAANDVPETLEGKRMMT 245
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LDMGLLVAGTKYRGEFEERLKKLM+E+K D+IILFIDEVHTLIGAGAAEGAIDAANILK
Sbjct: 246 LDMGLLVAGTKYRGEFEERLKKLMDEVKADDDIILFIDEVHTLIGAGAAEGAIDAANILK 305
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEP+VDE IQIL+GL+ERYE+H
Sbjct: 306 PALARGELQCIGATTIDEYRKHIEKDPALERRFQPVQVPEPTVDEAIQILQGLQERYELH 365
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
HKL+YTDEA+V+AA+ ++QYISDRFLPDKAIDLIDEAGSRVRL +A LPEEA+EL+KEL+
Sbjct: 366 HKLKYTDEAIVAAAKFAHQYISDRFLPDKAIDLIDEAGSRVRLENAALPEEAKELDKELK 425
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG--DVGPVVTE 496
+ KEK+ A+RGQDFE AG LRD+E++LK +I + +E +KA EAG D GP V E
Sbjct: 426 ALLKEKDTAIRGQDFEAAGALRDKEVELKTEIQKITQAKQEENKAAVEAGGGDSGPTVKE 485
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI IV+AWTGIPV+KVS+DE +L+ MEETLH R+IGQ+EAV A SRAIRRAR GLKN
Sbjct: 486 SDISKIVAAWTGIPVDKVSSDEGSQLMNMEETLHSRLIGQEEAVVACSRAIRRARTGLKN 545
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
PNRP+ASFIFSGPTGVGKSELAK+++ +YFGSE+AM+RLDMSEFMERHTVSKLIGSPPGY
Sbjct: 546 PNRPVASFIFSGPTGVGKSELAKSISQFYFGSEDAMVRLDMSEFMERHTVSKLIGSPPGY 605
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY+EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR VDFKNTL
Sbjct: 606 VGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVVDFKNTL 665
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
+IMTSNVGSSVIEKGG +GF L+ D +D+SY RIK+LV EELK YFRPEFLNRLDE+IV
Sbjct: 666 IIMTSNVGSSVIEKGGGGLGFQLNDDAEDTSYQRIKTLVNEELKNYFRPEFLNRLDEIIV 725
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
FRQL K EV+EIA IML++VF RLK KDI L VT+RF++R+V+EG+NP+YGARPLRRA+M
Sbjct: 726 FRQLNKNEVREIAAIMLEQVFKRLKEKDITLDVTDRFKDRLVDEGFNPTYGARPLRRAVM 785
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
RLLED++AEKML +I EG S I+DV++ G +TVL G
Sbjct: 786 RLLEDNLAEKMLNGDIGEGSSCIMDVNAAGEITVLTG 822
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKV+MLAQEEARRLGHN++G+E ++LGL+ EG G+AA+VL+++G R
Sbjct: 1 MFERFTEKAIKVVMLAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|299890930|gb|ADJ57429.1| clp protease ATP binding subunit [uncultured prymnesiophyte C19847]
Length = 817
Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/755 (72%), Positives = 652/755 (86%), Gaps = 9/755 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVA+RVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVASRVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +R+Q IR +G++ EA VGG S+ +K PTLEE+GTNLT+ A EG+LDPVV
Sbjct: 126 NLGIDLSRVRSQTIRELGDNAEAT---VGGSSTKSKSPTLEEFGTNLTQKAVEGRLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PDT+E K+V+ LD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDIPDTLEDKRVVALD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLL+AGTKYRGEFEERLKK+M+E++ ++ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLIAGTKYRGEFEERLKKIMDEVRTANNVILIIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
L+RGELQCIGATTL+EYRKHIEKD ALERRFQPV V EPSV+ETI+IL GLR+RYE HHK
Sbjct: 303 LSRGELQCIGATTLEEYRKHIEKDAALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +D+AL +AA+ S QYI+DRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+ ELR+I
Sbjct: 363 LVISDDALAAAAKFSDQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPAAAKELDGELREI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K K+EAVR QDFEKAG+LR+REM++KAQI+A+ + K +E + P VTE DI
Sbjct: 423 LKTKDEAVRAQDFEKAGQLREREMEIKAQINAIA----QSKKGASETSTITPTVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+AWT IPV K++ ES++LLKME+TLH R+IGQDEAV A+SRAIRRARVGLKNPNRP
Sbjct: 479 QIVAAWTSIPVNKLTKSESEKLLKMEDTLHSRIIGQDEAVVAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGSE+AM+RLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELTKALATYFFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN+MLQI EDGRL+DSKGRT+DFKNTLLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLMLQIFEDGRLSDSKGRTIDFKNTLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L D+ S YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFELSEDQTSSHYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV +IA+IMLKEVFDR+ K I+L+VT+RF+ R+++EGYNP+YGARPLRRA+MRLLE
Sbjct: 719 TKDEVGQIAEIMLKEVFDRISVKGIQLEVTDRFKTRLIDEGYNPAYGARPLRRAVMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
DS+AE++L+ +IK GD+ +VDV DG V VL G +
Sbjct: 779 DSLAEEVLSEKIKAGDTAVVDVGEDGKVKVLLGDT 813
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGLL EG G+ +VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLLGEGTGLGPKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
T+V +++G
Sbjct: 61 TEVEKIIG 68
>gi|443476197|ref|ZP_21066115.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
gi|443018866|gb|ELS33048.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
Length = 829
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/768 (73%), Positives = 658/768 (85%), Gaps = 16/768 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGGSSG K PTL+E+G+NLT+LA++GKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SAGGGSSGRTKTPTLDEFGSNLTQLAQDGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI++ D+PD ++ K+V+TL
Sbjct: 183 VGREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISNSDIPDILQEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMEEIRTAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLR+RYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILIGLRQRYEEHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEALV+AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 363 KLKIDDEALVAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRL 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV-VTEVD 498
KEK++AVR QDF+KA ELRD+E+DLK QI AL + KAE D + VTE D
Sbjct: 423 TLKEKDDAVRKQDFDKAAELRDKEIDLKQQIRAL----SQTKKAEAPTEDAPEIRVTEED 478
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I +IVS+WTG+PV K++ ES +L++MEETLH RVIGQDEAVKAISRAIRRARVGLK+PN
Sbjct: 479 IAYIVSSWTGVPVLKITESESVKLMQMEETLHSRVIGQDEAVKAISRAIRRARVGLKSPN 538
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASFIFSGPTGVGK+EL KALA+Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 539 RPIASFIFSGPTGVGKTELTKALASYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVG 598
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDFKNTLLI
Sbjct: 599 YNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQVLEDGRLTDSKGRTVDFKNTLLI 658
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
MTSNVGS VIEKGG +GFD ++D+ Y RI+SLV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 659 MTSNVGSKVIEKGGGGLGFDFAASQEDALYTRIRSLVNEELKQYFRPEFLNRLDEIIVFR 718
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK EVKEIAD+ML E F R+ K+I L VTERF++ +V+EGYNPSYGARPLRRAIMRL
Sbjct: 719 QLTKPEVKEIADLMLNEFFKRMLDKNIVLTVTERFKDLLVQEGYNPSYGARPLRRAIMRL 778
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV-----LNGSSGAPESL 841
LEDS+AE++L +++EG SV VDVD DG V V LNGS + + L
Sbjct: 779 LEDSLAEEILTGKVREGASVQVDVDDDGKVKVIEKEALNGSENSLQLL 826
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|412985529|emb|CCO18975.1| predicted protein [Bathycoccus prasinos]
Length = 944
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/757 (74%), Positives = 665/757 (87%), Gaps = 6/757 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ LA EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 173 GRGSGFV--AVEIPFTPRAKRVLELALEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 230
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG---NKMPTLEEYGTNLTKLAEEGKLD 197
NL ADP+ IR+QVIRMVGES EAVGAG G +K PTLEE+G++LTK AEE KLD
Sbjct: 231 NLDADPAKIRSQVIRMVGESQEAVGAGAGATGGAASGSKTPTLEEFGSDLTKQAEEAKLD 290
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
P VGR +I RV QILGRRTKNNPCL+GEPGVGK+AIAEGLAQ+IASG VP+T+EGK+++
Sbjct: 291 PCVGRTNEIRRVTQILGRRTKNNPCLVGEPGVGKSAIAEGLAQQIASGTVPETLEGKRMM 350
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
TLDMGLLVAGTKYRGEFEERLKKLM+E+KQ D IILFIDEVHTLIGAGAAEGAIDAANIL
Sbjct: 351 TLDMGLLVAGTKYRGEFEERLKKLMDEVKQDDAIILFIDEVHTLIGAGAAEGAIDAANIL 410
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEP+VDETI+ILKGLRERYE+
Sbjct: 411 KPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVQVPEPTVDETIEILKGLRERYEV 470
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HHKL+YTDEAL AA+ S QYISDRFLPDKAIDLIDEAGSRVRL H +PEEA+EL+KEL
Sbjct: 471 HHKLKYTDEALECAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLEHTSIPEEAKELDKEL 530
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTE 496
+ + KEK+ A+RGQDFE AG +RD+E++LK+QI A+ +K +E +KAE E+G + GP VTE
Sbjct: 531 KALQKEKDTAIRGQDFEAAGSIRDKEVELKSQIKAITEKKQEEAKAEIESGKETGPTVTE 590
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI +V+AWTGIPV+KV++DE+ RL+ MEE LH+R+IGQ+EA+ A SRAIRRAR GLK+
Sbjct: 591 QDIADVVAAWTGIPVDKVASDEAQRLMGMEEKLHERLIGQEEAIVACSRAIRRARTGLKS 650
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
PNRP+ASFIF+GPTGVGKSELAK+L+ +YFGSEEAM+RLDMSEFMERHTVSKLIGSPPGY
Sbjct: 651 PNRPVASFIFAGPTGVGKSELAKSLSQFYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGY 710
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY+EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR +DFKNTL
Sbjct: 711 VGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVIDFKNTL 770
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
+IMTSNVG+ IEKGG +GF LD + +D SY RIKSLV +ELK YFRPEFLNRLDE+I+
Sbjct: 771 IIMTSNVGAQQIEKGGGGLGFQLDDNVEDQSYQRIKSLVQDELKNYFRPEFLNRLDEIII 830
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
FRQL K EV+EIA IML VF RLK K+I L VT+RF+++VV+EG++P++GARPLRRAIM
Sbjct: 831 FRQLNKQEVREIAMIMLNNVFKRLKEKEITLDVTDRFKDKVVDEGFSPAFGARPLRRAIM 890
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
RLLED++AEKML+ +I EG S I+DV+++G + V+ G
Sbjct: 891 RLLEDNLAEKMLSGDIAEGTSAIMDVNAEGEIIVMTG 927
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 94/152 (61%), Gaps = 16/152 (10%)
Query: 23 SQNAGKSRR-NVKMMSYMQPSASRIS---SFSGLRRSNALDTFTCDFHSTVAVSLSSRRG 78
+ +A K R+ + M + S++R S +FSGLR +NA+D + + ++SR+
Sbjct: 22 TSSASKGRKVTMVMRANASMSSTRTSIPGNFSGLRSTNAIDMTSTLSRNGNFKGVTSRQL 81
Query: 79 KSGRAGGF---------VVK---AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLG 126
+ V+K AMFERFTEKAIKV+MLAQEEARRLGHN++G+E ++LG
Sbjct: 82 STKSGSSSSSSGKKLGAVIKGPRAMFERFTEKAIKVVMLAQEEARRLGHNFVGTEQIMLG 141
Query: 127 LLREGEGVAARVLENLGADPSNIRTQVIRMVG 158
L+ EG G+AA+VL+++G R +V +++G
Sbjct: 142 LIGEGTGIAAKVLKSMGISLKEARVEVEKIIG 173
>gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|383323125|ref|YP_005383978.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326294|ref|YP_005387147.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492178|ref|YP_005409854.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437446|ref|YP_005652170.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451815537|ref|YP_007451989.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|1001555|dbj|BAA10182.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|339274478|dbj|BAK50965.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|359272444|dbj|BAL29963.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275614|dbj|BAL33132.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278784|dbj|BAL36301.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961235|dbj|BAM54475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451781506|gb|AGF52475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
Length = 821
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/756 (73%), Positives = 654/756 (86%), Gaps = 12/756 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGGS G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GGGSGGRTKTPTLDEFGSNLTQMAAEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ IIL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I KEK++AVR QDFE+AGEL+DRE ++K QI A+ KAE + G+ P VT +I
Sbjct: 423 ILKEKDDAVRNQDFEQAGELKDREDEIKKQIRAIASS----KKAEGDNGE--PEVTSEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GFD D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFDFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEI++I+L++VF RL K+I LQVT++F+ER+VEEG+NP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEISEILLRDVFARLVEKEISLQVTDKFKERIVEEGFNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
ED +AE++L+ +KEG +VD+ D V V+ G +
Sbjct: 777 EDVLAEEILSGRLKEGSQALVDIGEDNQVVVIPGET 812
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|414079261|ref|YP_007000685.1| ATP-dependent Clp family protein [Anabaena sp. 90]
gi|413972540|gb|AFW96628.1| ATP-dependent Clp family protein [Anabaena sp. 90]
Length = 838
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/751 (73%), Positives = 655/751 (87%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 84 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 141
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E GG S K PTL+E+G+NLT++A + KLDPVV
Sbjct: 142 NLGVDLTKVRTQVIRMLGETAEVTP---GGPSGRTKTPTLDEFGSNLTQMAIDNKLDPVV 198
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIAS D+PD +E K+V+TLD
Sbjct: 199 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIASKDIPDILEDKRVVTLD 258
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 259 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 318
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 319 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEAHHK 378
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA+LS +YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 379 LKISDEALVAAAKLSDRYISDRFLPDKAIDLMDEAGSRVRLINSQLPPAAKELDKELRQI 438
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDI 499
KEK++AVR QDF++AGELRDREM++KA+I + +K+ +GD V PVVTE DI
Sbjct: 439 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRTIA-----QTKSNGASGDGVEPVVTEEDI 493
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 494 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 553
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+ELAK+LA+Y+FG+EEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 554 PIASFVFSGPTGVGKTELAKSLASYFFGAEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 613
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 614 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 673
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG IGF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 674 TSNIGSKVIEKGGSGIGFEFSEDATETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 733
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L KLEV +IA+IMLKEVF RL K I L+VT+RF++R++ EGY+PSYGARPLRRAIMRLL
Sbjct: 734 LNKLEVTQIAEIMLKEVFGRLTEKGIVLEVTDRFKDRLITEGYSPSYGARPLRRAIMRLL 793
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE++L+ IK+GD+ +VDVD +G V V
Sbjct: 794 EDSLAEEILSGRIKDGDTALVDVDENGIVQV 824
>gi|428301853|ref|YP_007140159.1| ATPase [Calothrix sp. PCC 6303]
gi|428238397|gb|AFZ04187.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 823
Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/753 (73%), Positives = 651/753 (86%), Gaps = 9/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GG SS K PTL+E+G+NLT++A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTQ---GGPSSRTKTPTLDEFGSNLTQMAIDGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RI++ D+PD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLATRISTKDIPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA+LS +YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 363 LKISDEALVAAAKLSDRYISDRFLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR QDF++AGELRDREM++KA+I + E E PVVTE DI
Sbjct: 423 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRTIAQNKTNAKGNEGEE----PVVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG IGF+ D+ DS YNRIK LV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGIGFEFAEDQTDSQYNRIKFLVNEELKNYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EV EIADIMLKEVF RL K I L+V++ F++R+++EGY+PSYGARPLRRAIMRLLE
Sbjct: 719 NKAEVTEIADIMLKEVFGRLTEKGITLEVSDSFKDRLIQEGYSPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++L+ +K+GD +VD+D +G V V G
Sbjct: 779 DSLAEEILSGRVKDGDIAVVDIDENGAVIVRPG 811
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|376001877|ref|ZP_09779731.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|423062254|ref|ZP_17051044.1| ATPase AAA-2 [Arthrospira platensis C1]
gi|375329788|emb|CCE15484.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|406716162|gb|EKD11313.1| ATPase AAA-2 [Arthrospira platensis C1]
Length = 823
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/754 (74%), Positives = 655/754 (86%), Gaps = 10/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGSSG K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTA----GGSSGRTKTPTLDEFGSNLTQMAAEGKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E K+V+TL
Sbjct: 182 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIAQNDIPDILEDKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRSCGNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVPETIEILYGLRERYEQHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKIIDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK++AVR QDF++AGELRDREM++K+QI A+ K ++ + D P+VTE DI
Sbjct: 422 VLKEKDDAVRSQDFDRAGELRDREMEIKSQIRAIAQNKKSETRTDD---DDSPMVTEEDI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTGIPV K++ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNR
Sbjct: 479 AQIVASWTGIPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IM
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIM 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + ++ D+ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 659 TSNIGSKVIEKGGGGLGFEFEENQADAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQ 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA IML EVF RL K I L++T+RF+ER+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 719 LNKDEVKEIAVIMLNEVFGRLTEKGIRLEITDRFKERLVEEGYNPSYGARPLRRAIMRLL 778
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
EDS+AE++L+ +KEGD+ IVDV+ DG V VL G
Sbjct: 779 EDSLAEEILSGRVKEGDTAIVDVNEDGQVQVLQG 812
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|440683788|ref|YP_007158583.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428680907|gb|AFZ59673.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 824
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/752 (74%), Positives = 653/752 (86%), Gaps = 12/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGG SG K PTL+E+G+NLT++A + KLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SPGGGPSGRTKTPTLDEFGSNLTQMATDNKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TL
Sbjct: 183 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVAETIEILFGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +DEAL +AA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKISDEALEAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVD 498
I KEK++AVR QDF++AGELRDREM++KA+I A+ SK GD + PVVTE D
Sbjct: 423 ILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIA-----QSKTNATGGDGLEPVVTEED 477
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQD+AVKA+SRAIRRARVGLKNPN
Sbjct: 478 IAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDDAVKAVSRAIRRARVGLKNPN 537
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 538 RPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVG 597
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI
Sbjct: 598 YNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLI 657
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
+TSN+GS VIEKGG IGF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 658 LTSNIGSKVIEKGGSGIGFEFSEDATETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFR 717
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QL K EV +IA+IMLKEVF RL K I L+VT+RF++R++ EGY+PSYGARPLRRAIMRL
Sbjct: 718 QLNKAEVTQIAEIMLKEVFGRLTDKGIVLEVTDRFKDRLITEGYSPSYGARPLRRAIMRL 777
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
LEDS+AE++L+ IK+GD+ +VDVD +G V V
Sbjct: 778 LEDSLAEEILSGRIKDGDTALVDVDENGVVQV 809
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|422303962|ref|ZP_16391311.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
gi|389791002|emb|CCI13172.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
Length = 821
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/754 (73%), Positives = 654/754 (86%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G S G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVRGQDFEKAGELRDREM++K QI L S + E G+ P V +I
Sbjct: 423 ILKQKDDAVRGQDFEKAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA+I+LK+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ + +GD+ +VD+D +G V V++G
Sbjct: 777 EDVLAEEILSGRVSDGDTAMVDIDEEGKVKVISG 810
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|166368696|ref|YP_001660969.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|425465251|ref|ZP_18844561.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
gi|166091069|dbj|BAG05777.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|389832560|emb|CCI23740.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
Length = 821
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/754 (73%), Positives = 654/754 (86%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G S G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVRGQDFEKAGELRDREM++K QI L S + E G+ P V +I
Sbjct: 423 ILKQKDDAVRGQDFEKAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA+I+LK+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ + +GD+ +VD+D +G V V++G
Sbjct: 777 EDVLAEEILSGRVSDGDTAMVDIDEEGKVKVISG 810
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLRDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|443311631|ref|ZP_21041257.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442778360|gb|ELR88627.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 829
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/752 (73%), Positives = 656/752 (87%), Gaps = 8/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG G + K PTL+E+G+NLT++A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VNAGSPSGRT--KTPTLDEFGSNLTQMAADGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ D+PD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDIPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILFGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA+LS +YISDRFLPDKAIDL+DEAGSRVRL ++ LP A++L+KELR++
Sbjct: 363 LKISDEALFAAAKLSDRYISDRFLPDKAIDLMDEAGSRVRLINSALPPAAKDLDKELRKV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVRGQDF KAGELRDREM++K +I AL ++ + G+ PVVTE DI
Sbjct: 423 LKEKDDAVRGQDFGKAGELRDREMEIKGEIRALSQNKANTTRPD---GEDAPVVTEEDIA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++L+ ME+TLH+R+IGQ+EAV+A+S+AIRRARVGLKNPNRP
Sbjct: 480 HIVASWTGVPVSKLTESESEKLMHMEDTLHQRLIGQEEAVRAVSKAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL K+LAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 540 IASFVFSGPTGVGKTELTKSLAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 600 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 659
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKG +GF+L D +S YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 660 SNIGSKVIEKGAAGLGFELAQDVAESQYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 719
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
T+ EVKEIADI+LKEVF+RL K I L VTERF++R+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 720 TRDEVKEIADILLKEVFNRLMEKGITLDVTERFKDRLVEEGYNPSYGARPLRRAIMRLLE 779
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 832
DS+AE++L+ +++GD+ +VDVD G V V++
Sbjct: 780 DSLAEEILSGRVRDGDTALVDVDETGIVKVVS 811
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 59/71 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL ++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|425438612|ref|ZP_18818956.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|425462269|ref|ZP_18841743.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|425470166|ref|ZP_18849036.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440752077|ref|ZP_20931280.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443661761|ref|ZP_21132789.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159029700|emb|CAO87778.1| clpC [Microcystis aeruginosa PCC 7806]
gi|389720211|emb|CCH96065.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|389824679|emb|CCI26165.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|389884278|emb|CCI35401.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440176570|gb|ELP55843.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443332247|gb|ELS46866.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 821
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/754 (73%), Positives = 654/754 (86%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G S G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVRGQDFEKAGELRDREM++K QI L S + E G+ P V +I
Sbjct: 423 ILKQKDDAVRGQDFEKAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA+I+LK+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ + +GD+ +VD+D +G V V++G
Sbjct: 777 EDVLAEEILSGRVSDGDTAMVDIDEEGKVKVISG 810
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|443323335|ref|ZP_21052342.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
gi|442786899|gb|ELR96625.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
Length = 820
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/751 (72%), Positives = 650/751 (86%), Gaps = 10/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G NK PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAAGSTNQGR--NKTPTLDEFGSNLTQMASEGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TLD
Sbjct: 184 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEDKRVVTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V ETI+IL GLRERYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVAETIEILYGLRERYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L DEAL +AA+LS++YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQI
Sbjct: 364 LSILDEALEAAAKLSHRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDRELRQI 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVR Q+F+ AGE+RDREM++KAQI A+ S +TE+ + PVV +I
Sbjct: 424 LKEKDDAVRAQNFDLAGEMRDREMEIKAQIRAIA------STKKTESDNENPVVDAEEIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 478 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSE++MIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 IASFIFSGPTGVGKTELTKALAAYFFGSEDSMIRLDMSEYMERHTVSKLIGSPPGYVGYN 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 598 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 658 SNIGSKVIEKGGGGLGFEFAEDKTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQL 717
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EV EIA+I+LK+VF RL K+I L+VT +F+ER+VEEGYNP+YGARPLRRAIMRLLE
Sbjct: 718 NKEEVTEIAEILLKDVFSRLTDKNITLEVTNKFKERLVEEGYNPAYGARPLRRAIMRLLE 777
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
D++AE++L+ +I EGD IVD + +G V ++
Sbjct: 778 DALAEEILSGKISEGDKAIVDTNDEGKVVII 808
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 61/71 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
T+V +++G +
Sbjct: 61 TEVEKIIGRGS 71
>gi|434403231|ref|YP_007146116.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257486|gb|AFZ23436.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 823
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/751 (74%), Positives = 651/751 (86%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GG S K PTL+E+G+NLT++A + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SPGGPSGRTKTPTLDEFGSNLTQMAVDNKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVAETIEILFGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 363 LKISDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDI 499
KEK++AVR QDF++AGELRDREM++KA+I A+ SK GD + PVVTE DI
Sbjct: 423 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIA-----QSKTNASGGDGLEPVVTEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQD+AVKA+SRAIRRARVGLKNPNR
Sbjct: 478 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDDAVKAVSRAIRRARVGLKNPNR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 598 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG IGF+ D +S+YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGGSGIGFEFADDVTESAYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L+K EV +IA+IMLKEVF RL K I L+VT+RF++R+++EGY+PSYGARPLRRAIMRLL
Sbjct: 718 LSKPEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKDRLIDEGYSPSYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE++L+ IK+GD VDVD G V V
Sbjct: 778 EDSLAEEILSGRIKDGDIATVDVDETGTVRV 808
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|409992273|ref|ZP_11275473.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567174|dbj|BAI89446.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409936864|gb|EKN78328.1| ATPase [Arthrospira platensis str. Paraca]
Length = 823
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/754 (74%), Positives = 655/754 (86%), Gaps = 10/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGSSG K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA----GGSSGRTKTPTLDEFGSNLTQMASEGKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E K+V+TL
Sbjct: 182 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIAQNDIPDILEDKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRSCGNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVPETIEILYGLRERYEQHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEA+ +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKIIDEAIEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK++AVR QDF++AGELRDREM++K+QI A+ K ++ + D P+VTE DI
Sbjct: 422 VLKEKDDAVRSQDFDRAGELRDREMEIKSQIRAIAQNKKSETRTDE---DDSPMVTEEDI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTGIPV K++ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNR
Sbjct: 479 AQIVASWTGIPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTL+IM
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLIIM 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + ++ D+ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 659 TSNIGSKVIEKGGGGLGFEFEENQADAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQ 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA IML EVF RL K I L++T+RF+ER+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 719 LNKDEVKEIAVIMLNEVFGRLTEKGIRLEITDRFKERLVEEGYNPSYGARPLRRAIMRLL 778
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
EDS+AE++L+ +KEGD+ IVDV+ DG V VL G
Sbjct: 779 EDSLAEEILSGRVKEGDTAIVDVNEDGQVQVLQG 812
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|425443940|ref|ZP_18824003.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|425455767|ref|ZP_18835478.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
gi|389732831|emb|CCI03294.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|389803296|emb|CCI17774.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
Length = 821
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/754 (73%), Positives = 654/754 (86%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G S G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMAGEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVRGQDFEKAGELRDREM++K QI L S + E G+ P V +I
Sbjct: 423 ILKQKDDAVRGQDFEKAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA+I+LK+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ + +GD+ +VD+D +G V V++G
Sbjct: 777 EDVLAEEILSGRVSDGDTAMVDIDEEGKVKVISG 810
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|425437952|ref|ZP_18818364.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
gi|389676952|emb|CCH94083.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
Length = 821
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/754 (73%), Positives = 653/754 (86%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G S G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVRGQDFEKAGELRDREM++K QI L S + E G+ P V +I
Sbjct: 423 ILKQKDDAVRGQDFEKAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA+I+LK+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ + GD+ +VD+D +G V V++G
Sbjct: 777 EDVLAEEILSGRVSGGDTAMVDIDEEGKVKVISG 810
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|428303861|ref|YP_007140686.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428245396|gb|AFZ11176.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 826
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/751 (73%), Positives = 654/751 (87%), Gaps = 9/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G G S G K PTL+E+G+NLT++A +GKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---GAGASSQGRTKTPTLDEFGSNLTQMAADGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRSKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILHGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +D AL +AA+LS +YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELR+
Sbjct: 363 KLKISDLALEAAAKLSDRYISDRFLPDKAIDLVDEAGSRVRLINSQLPAAAKELDKELRK 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK+EAVR QDF++AGELRDREM++KA+I ++ K K+ EA PVVTE DI
Sbjct: 423 VLKEKDEAVRSQDFDRAGELRDREMEIKAEIRSIAQTKKSDPKSSDEAS---PVVTEEDI 479
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 480 AQIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 539
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 540 PIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 599
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 600 NEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 659
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ +S YNRI+SLV EELK YFRPEFLNRLDE+IVF Q
Sbjct: 660 TSNIGSKVIEKGGGGLGFEFSENKTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFHQ 719
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LT+ EVKEIADIMLKE+F RL + + L+VTERF++R+V+EGY+P+YGARPLRRAIMRLL
Sbjct: 720 LTRDEVKEIADIMLKELFKRLNDQGMSLEVTERFKDRLVQEGYSPAYGARPLRRAIMRLL 779
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
ED +AE++L+ +K+G++ +VDV DG V V
Sbjct: 780 EDVLAEEILSGRLKDGNAAVVDVGEDGQVKV 810
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|157413559|ref|YP_001484425.1| ClpC [Prochlorococcus marinus str. MIT 9215]
gi|157388134|gb|ABV50839.1| ClpC [Prochlorococcus marinus str. MIT 9215]
Length = 842
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/774 (71%), Positives = 663/774 (85%), Gaps = 15/774 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D + +RTQVIRM+GE+ E VG G S K TL+E+GTNLTKLA E KLDPVV
Sbjct: 126 NLNIDLTKVRTQVIRMLGETAE-VGTGGSTAKSNLKTATLDEFGTNLTKLASESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RVVQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TLD
Sbjct: 185 GRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TD+AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E+++ELRQ+
Sbjct: 365 LKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKEIDRELRQV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE-----MSKAETEA--GDV--- 490
K+K E+VR Q+F++AG+LR++EM+L A+I +++ KE S A+ E+ GD
Sbjct: 425 QKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLENKKESTVGDKSNADNESVKGDSTLL 484
Query: 491 -GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 549
P+V+E D+ HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRR
Sbjct: 485 QSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRR 544
Query: 550 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 609
ARVGLKNPNRPIASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKL
Sbjct: 545 ARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKL 604
Query: 610 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 669
IGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRT
Sbjct: 605 IGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRT 664
Query: 670 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFL 728
VDFKNTLLIMTSN+GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFL
Sbjct: 665 VDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFL 724
Query: 729 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 788
NRLDE+IVFRQLTK EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGA
Sbjct: 725 NRLDEIIVFRQLTKNEVKEIAEIMLQEVFARLQDKGIKLNVTDAFKERLVEEGYNPSYGA 784
Query: 789 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
RPLRRA+MRLLEDS+AE++L+ IK+GD+ +VD+D + VT+ S + + LA
Sbjct: 785 RPLRRAVMRLLEDSLAEEVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELA 838
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL++LG + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|425451878|ref|ZP_18831697.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
gi|389766574|emb|CCI07823.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
Length = 821
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/754 (73%), Positives = 653/754 (86%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G S G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GSSSQGRTKTPTLDEFGSNLTQMASEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ ++L IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVVLVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVRGQDFEKAGELRDREM++K QI L S + E G+ P V +I
Sbjct: 423 ILKQKDDAVRGQDFEKAGELRDREMEIKTQIRNLA------STKKGEDGNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIA+I+LK+VF RL ++I L VT++F+ER++EEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ + GD+ +VD+D +G V V++G
Sbjct: 777 EDVLAEEILSGRVSGGDTAMVDIDEEGKVKVISG 810
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|218194777|gb|EEC77204.1| hypothetical protein OsI_15716 [Oryza sativa Indica Group]
Length = 785
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/634 (90%), Positives = 615/634 (97%), Gaps = 2/634 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 154 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 211
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LGADP+NIRTQVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 212 SLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVV 271
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI++GDVP+TIEGKKVITLD
Sbjct: 272 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLD 331
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 332 MGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPA 391
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL+GLRERYE+HHK
Sbjct: 392 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHK 451
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTD++L++AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP+EA+EL+KELRQ+
Sbjct: 452 LRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQV 511
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK+KNEAVRGQDFEKAGELRDREM+LKAQI+A++DK KEM KAETE+G+VGP+VTE DIQ
Sbjct: 512 TKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQ 571
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTGIPVEKVS+DESDRLLKMEETLH R+IGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 572 HIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRP 631
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 632 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 691
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 692 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 751
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 714
SNVGSSVIEKGGR+IGFDLDYDEKD+SYNRI++
Sbjct: 752 SNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIRAW 785
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 6/137 (4%)
Query: 28 KSRRNVKMMSYMQPSASRISSFSGLRRSNALDTFTC---DFHSTVAVSLSSRRGKSGRAG 84
+ R MM M + F GLR++N LD+ + DF S VA +S RG R
Sbjct: 24 RVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRG- 82
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
VV+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G
Sbjct: 83 --VVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGI 140
Query: 145 DPSNIRTQVIRMVGEST 161
+ + R +V +++G +
Sbjct: 141 NLKDARVEVEKIIGRGS 157
>gi|126696533|ref|YP_001091419.1| ClpC [Prochlorococcus marinus str. MIT 9301]
gi|126543576|gb|ABO17818.1| ClpC [Prochlorococcus marinus str. MIT 9301]
Length = 841
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/774 (71%), Positives = 662/774 (85%), Gaps = 16/774 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NL D + +RTQVIRM+GE+ E VG G G + GN K TL+E+GTNLTKLA E KLDPV
Sbjct: 126 NLNIDLTKVRTQVIRMLGETAE-VGTG-GSSNKGNLKTATLDEFGTNLTKLASESKLDPV 183
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RVVQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TL
Sbjct: 184 VGRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTL 243
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 244 DIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 303
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH
Sbjct: 304 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHH 363
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TD+AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+++++ELRQ
Sbjct: 364 RLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDRELRQ 423
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD---------- 489
I K+K E+VR Q+F++AG+LR++EM+L A+I ++D KE + + D
Sbjct: 424 IQKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLDNKKESTAVDQTDPDNSAKSDSKLL 483
Query: 490 VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 549
P+V+E D+ HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRR
Sbjct: 484 QSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRR 543
Query: 550 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 609
ARVGLKNPNRPIASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKL
Sbjct: 544 ARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKL 603
Query: 610 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 669
IGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRT
Sbjct: 604 IGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRT 663
Query: 670 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFL 728
VDFKNTLLIMTSN+GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFL
Sbjct: 664 VDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFL 723
Query: 729 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 788
NRLDE+IVFRQLTK EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGA
Sbjct: 724 NRLDEIIVFRQLTKNEVKEIAEIMLQEVFIRLQDKGIKLNVTDAFKERLVEEGYNPSYGA 783
Query: 789 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
RPLRRA+MRLLEDS+AE++L+ IK+GD+ +VD+D + VT+ S + + LA
Sbjct: 784 RPLRRAVMRLLEDSLAEEVLSGRIKDGDNALVDIDDNKKVTINISSEESSQELA 837
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL++LG + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|255087254|ref|XP_002505550.1| predicted protein [Micromonas sp. RCC299]
gi|226520820|gb|ACO66808.1| predicted protein [Micromonas sp. RCC299]
Length = 886
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/757 (75%), Positives = 663/757 (87%), Gaps = 6/757 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ LA EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 115 GRGSGFV--AVEIPFTPRAKRVLELALEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 172
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG--NKMPTLEEYGTNLTKLAEEGKLDP 198
NL ADPS IR+QVIRMVGES EAVGA G G + +K PTLEE+G++LTK AEE KLDP
Sbjct: 173 NLDADPSKIRSQVIRMVGESQEAVGAAPGAGGAAGGSKTPTLEEFGSDLTKQAEEAKLDP 232
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
+GR +I RV QILGRRTKNNPCLIGEPGVGK+AIAEGLAQ+IA+ DVP+T+EGK+++T
Sbjct: 233 CIGRSNEIIRVTQILGRRTKNNPCLIGEPGVGKSAIAEGLAQKIAANDVPETLEGKRMMT 292
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LDMGLLVAGTKYRGEFEERLKKLM+E+K ++IILFIDEVHTLIGAGAAEGAIDAANILK
Sbjct: 293 LDMGLLVAGTKYRGEFEERLKKLMDEVKADEDIILFIDEVHTLIGAGAAEGAIDAANILK 352
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEPSV+E I IL+GLRERYE H
Sbjct: 353 PALARGELQCIGATTIDEYRKHIEKDPALERRFQPVQVPEPSVEEAILILQGLRERYETH 412
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
HKLRYTDEA+ +AA+ ++QYISDRFLPDKAIDLIDEAGSRVRL HA LPEEA+EL+KEL+
Sbjct: 413 HKLRYTDEAIEAAAKFAHQYISDRFLPDKAIDLIDEAGSRVRLAHAALPEEAKELDKELK 472
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG--DVGPVVTE 496
+ KEK+ A+R QDFE AG LRD+E++LK +I + +E +KA EAG + GP VTE
Sbjct: 473 ALLKEKDTAIRAQDFEAAGALRDKEVELKTEIQKITKAKQEENKAALEAGGGEAGPTVTE 532
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI IV++WTGIPVEKVS+DE ++L+ MEETLH R+IGQ+EAV A SRAIRRAR GLKN
Sbjct: 533 SDIAKIVASWTGIPVEKVSSDEGNQLMNMEETLHSRLIGQEEAVVACSRAIRRARTGLKN 592
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
PNRP+ASFIFSGPTGVGKSELAK+++++YFGSE+AM+RLDMSEFMERHTVSKLIGSPPGY
Sbjct: 593 PNRPVASFIFSGPTGVGKSELAKSISSFYFGSEDAMVRLDMSEFMERHTVSKLIGSPPGY 652
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY+EGGQLTEAVRRRPYT+VLFDE+EKAHPDVFNMMLQILEDGRLTDSKGR VDFKNTL
Sbjct: 653 VGYSEGGQLTEAVRRRPYTLVLFDEVEKAHPDVFNMMLQILEDGRLTDSKGRVVDFKNTL 712
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
+I+TSNVGSSVIEKGG +GF L+ D +D+SY RIK LV EELK YFRPEFLNRLDE+IV
Sbjct: 713 IILTSNVGSSVIEKGGGGLGFQLNDDAEDTSYQRIKQLVNEELKNYFRPEFLNRLDEIIV 772
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
FRQL K EV+EIA IML +VF RLK K+I L VT+RF++R+V+EG+NP+YGARPLRRA+M
Sbjct: 773 FRQLNKNEVREIAQIMLNQVFKRLKEKEITLDVTDRFKDRLVDEGFNPTYGARPLRRAVM 832
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
RLLED++AEKML +I EG S I+DV++ G +TVL G
Sbjct: 833 RLLEDNLAEKMLNGDISEGSSCIMDVNAAGEITVLTG 869
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 83/119 (69%), Gaps = 7/119 (5%)
Query: 49 FSGLRRSNALDTF------TCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKV 102
+G RR++++DT F+ VA +L G+SGR FV KAMFERFTEKAIKV
Sbjct: 1 MTGFRRASSIDTLGRGIGAKKTFNGAVAQTLG-LAGRSGRGRRFVTKAMFERFTEKAIKV 59
Query: 103 IMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
+MLAQEEARRLGHN++G+E ++LGL+ EG G+AA+VL+++G R +V +++G +
Sbjct: 60 VMLAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEARIEVEKIIGRGS 118
>gi|254527057|ref|ZP_05139109.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
gi|221538481|gb|EEE40934.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
Length = 842
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/774 (71%), Positives = 658/774 (85%), Gaps = 15/774 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D + +RTQVIRM+GE+ E VG G S K TL+E+GTNLTKLA E KLDPVV
Sbjct: 126 NLNIDLTKVRTQVIRMLGETAE-VGTGGSSTKSNLKTATLDEFGTNLTKLASESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RVVQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TLD
Sbjct: 185 GRHSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TD+AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E+++ELRQ+
Sbjct: 365 LKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKEIDRELRQV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD----------- 489
K+K E+VR Q+F++AG+LR++EM+L A+I +++ KE + + D
Sbjct: 425 QKQKEESVRDQNFDQAGQLREKEMELSAKIKEVLENKKESTVGDKSNADNKSVKGDSTLL 484
Query: 490 VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 549
P+V+E D+ HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRR
Sbjct: 485 QSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRR 544
Query: 550 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 609
ARVGLKNPNRPIASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKL
Sbjct: 545 ARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKL 604
Query: 610 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 669
IGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRT
Sbjct: 605 IGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRT 664
Query: 670 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFL 728
VDFKNTLLIMTSN+GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFL
Sbjct: 665 VDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFL 724
Query: 729 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 788
NRLDE+IVFRQLTK EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGA
Sbjct: 725 NRLDEIIVFRQLTKNEVKEIAEIMLQEVFARLQDKGIKLNVTDAFKERLVEEGYNPSYGA 784
Query: 789 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
RPLRRA+MRLLEDS+AE++L+ IK+GD +VD+D + VT+ S + + LA
Sbjct: 785 RPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDDNKKVTINISSEESSQELA 838
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL++LG + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|428778441|ref|YP_007170227.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428692720|gb|AFZ48870.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 823
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/751 (74%), Positives = 648/751 (86%), Gaps = 9/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GGG K PTL+E+G+NLT+LA + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVSS---GGGQGRTKTPTLDEFGSNLTQLAADSKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD
Sbjct: 183 GRQNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIGNEDVPDILENKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ET++IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETVEILYGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LR TDEAL +AA+LS +YISDR LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+
Sbjct: 363 LRITDEALDAAAKLSDRYISDRQLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDQELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF++AGELRDREM++K +I AL S E + G P+V +I
Sbjct: 423 LKQKDDAVRSQDFDRAGELRDREMEIKGEIRALASAKTAESNKEDQPG---PIVGVEEIA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVS+WTG+PV K++ ES +LL +EETLH+R+IGQ+EAVK++SRAIRRARVGLKNPNRP
Sbjct: 480 HIVSSWTGVPVSKITETESQKLLHLEETLHERLIGQEEAVKSVSRAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 540 IASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 600 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 659
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+LD D+ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 660 SNIGSKVIEKGGGGLGFELDQDQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 719
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+ EVKEIA+IML+EVF RL ++I L+VTE FRER+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 720 NREEVKEIAEIMLREVFSRLTEQEINLEVTEAFRERLVEEGYNPSYGARPLRRAIMRLLE 779
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
D +AE++L+ + EGD+ VDV +G V V
Sbjct: 780 DILAEEILSGRLSEGDTATVDV-VEGEVKVF 809
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|307154665|ref|YP_003890049.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984893|gb|ADN16774.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 821
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/754 (73%), Positives = 660/754 (87%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GG ++G NK PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GGPTTGRNKTPTLDEFGSNLTQMAAEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL +QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLITSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ K+K++AVR QDF++AGELRDREM++KA+I A+ S +TE P V +I
Sbjct: 423 VLKQKDDAVRSQDFDRAGELRDREMEIKAEIRAIA------SAKKTEGESDEPSVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
+IV++WTGIPV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 ANIVASWTGIPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNILLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFEADQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L++ EVKEIADI+LKEVF RL K I L+VT++F++R+VEEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LSRDEVKEIADILLKEVFSRLTEKGITLEVTQKFKDRLVEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ ++K+GD+ I D+DS+G V +++G
Sbjct: 777 EDVLAEEILSGQVKDGDTAIADIDSEGKVKIIHG 810
>gi|427727388|ref|YP_007073625.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427363307|gb|AFY46028.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 856
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/751 (74%), Positives = 660/751 (87%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 101 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 158
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G G + K PTL+E+G+NLT++A + KLDPVV
Sbjct: 159 NLGVDLSKVRTQVIRMLGETAEVSATGSSGRT---KTPTLDEFGSNLTQMATDNKLDPVV 215
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 216 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLD 275
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 276 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 335
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 336 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHK 395
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 396 LKISDEALVAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQI 455
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDI 499
KEK++AVR QDF++AGELRDREM++KA+I A+ SKA +GD V PVVTE DI
Sbjct: 456 LKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIA-----QSKANGASGDGVEPVVTEEDI 510
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 511 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 570
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 571 PIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 630
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 631 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 690
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG IGF+ D+ +S YNRIK+LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 691 TSNIGSKVIEKGGGGIGFEFGEDQSESQYNRIKNLVNEELKQYFRPEFLNRLDEIIVFRQ 750
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L+KLEV EIADIMLKEVF RL K I L+V++RF++R+++EGY+PSYGARPLRRAIMRLL
Sbjct: 751 LSKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKDRLIQEGYSPSYGARPLRRAIMRLL 810
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE++L+ IK+GD +VDVD +GNV V
Sbjct: 811 EDSLAEEILSGRIKDGDVALVDVDENGNVQV 841
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 61/72 (84%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + +
Sbjct: 33 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 92
Query: 150 RTQVIRMVGEST 161
R +V +++G +
Sbjct: 93 RIEVEKIIGRGS 104
>gi|81299071|ref|YP_399279.1| ATPase [Synechococcus elongatus PCC 7942]
gi|81167952|gb|ABB56292.1| ATPase [Synechococcus elongatus PCC 7942]
Length = 824
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/752 (74%), Positives = 651/752 (86%), Gaps = 9/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GGG K PTL+E+G+NLT+ A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---STGGGQGRTKTPTLDEFGSNLTQQAADGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVD+TI+IL+GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKIADEALEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF+KAGELRDREM++K QI ++ K + T D P+VTE DI
Sbjct: 423 LKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPIVTEEDIA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES +LL MEETLH R+IGQDEAVKA+SRAIRRARVGLKNPNRP
Sbjct: 480 HIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 540 IASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFKNTL+I+T
Sbjct: 600 EGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFKNTLIILT 659
Query: 681 SNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
SN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 660 SNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 719
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIADIML+EVF R+ K I L VTE+F++R+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 720 LNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLL 779
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
EDS+AE+ L+ +++EGD+ +VD+ +G V VL
Sbjct: 780 EDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL 811
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|427420614|ref|ZP_18910797.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425756491|gb|EKU97345.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 822
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/751 (74%), Positives = 655/751 (87%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GG K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---STGGSQGRTKTPTLDEFGSNLTQMASEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANGDIPDILEEKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAANVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILHGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DE+L +AA+L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL++ELR +
Sbjct: 363 LKILDESLEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDRELRSV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTEVDI 499
K+K+ AVR QDF+KAGELRDREM++KA+I A+ SK EAG P VTE DI
Sbjct: 423 LKDKDNAVRSQDFDKAGELRDREMEIKAEIRAIA-----QSKRTDEAGSSDSPEVTEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+RVIGQDEAVKAISRAIRRARVGLKNPNR
Sbjct: 478 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRVIGQDEAVKAISRAIRRARVGLKNPNR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
+EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 598 SEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+L+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGGGGLGFELEEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTK EVKEI+DI+LKEVF RL + I L+VT++F+ER+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 718 LTKPEVKEISDILLKEVFGRLTEQGITLEVTDKFKERLVEEGYNPSYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
ED++AE++L+ +++GD+ +VDVD G V +
Sbjct: 778 EDTLAEEILSSRLRDGDTAVVDVDEKGKVII 808
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|254422552|ref|ZP_05036270.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196190041|gb|EDX85005.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 826
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/750 (73%), Positives = 653/750 (87%), Gaps = 6/750 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G+ G + K PTL+E+G NLT++A +GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVSGSTSSQGRT--KTPTLDEFGANLTQMAADGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + D+PD +E K+V+TLD
Sbjct: 184 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIGNNDIPDILEDKRVVTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMEEIRAAANVILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLR+RYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRDRYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ D+AL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 364 LKILDDALDAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPPAAKELDKELRQV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K+ AVR QDF+KAGELRDREM++K +I + + K+ AE D P VTE DI
Sbjct: 424 LKDKDNAVRSQDFDKAGELRDREMEIKTEIRTIA-QTKKAEDAEDAKAD-SPKVTEEDIA 481
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+ LH+R+IGQDEAV+AISRAIRRARVGLK+PNRP
Sbjct: 482 HIVASWTGVPVNKLTESESEKLLHMEDVLHQRLIGQDEAVRAISRAIRRARVGLKSPNRP 541
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAK+LA Y+FG+EEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 542 IASFVFSGPTGVGKTELAKSLATYFFGAEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 601
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 602 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 661
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L+ D+ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 662 SNIGSKVIEKGGGGLGFELEADQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 721
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVKEI+ I+LKEVF RL+ + I L+VT++F++R+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 722 TKDEVKEISVILLKEVFSRLEEQGITLEVTDKFKDRLVEEGYNPSYGARPLRRAIMRLLE 781
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE++L+ I++GD+ +VDV DG + V
Sbjct: 782 DSLAEEILSGRIQDGDTAVVDVGEDGKIVV 811
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|78779482|ref|YP_397594.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str. MIT
9312]
gi|78712981|gb|ABB50158.1| ATPase [Prochlorococcus marinus str. MIT 9312]
Length = 842
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/774 (71%), Positives = 657/774 (84%), Gaps = 15/774 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D + +RTQVIRM+GE+ E VG+G K TL+E+GTNLTKLA E KLDPVV
Sbjct: 126 NLSIDLTKVRTQVIRMLGETAE-VGSGANSSKGNLKTATLDEFGTNLTKLASESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RVVQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD
Sbjct: 185 GRYAEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQLGDIPDILEDKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA++++KELRQI
Sbjct: 365 LKITDEALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQI 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV---------- 490
K+K E+VR Q+F++AG+LR++E++L A+I +++ KE + + + D
Sbjct: 425 QKQKEESVRDQNFDQAGQLREKEIELSAKIKEVLENKKESTTEDESSVDTNSVKNDSKLL 484
Query: 491 -GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 549
P+V E D+ HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRR
Sbjct: 485 QNPMVNEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRR 544
Query: 550 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 609
ARVGLKNPNRPIASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKL
Sbjct: 545 ARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKL 604
Query: 610 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 669
IGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRT
Sbjct: 605 IGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRT 664
Query: 670 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFL 728
VDFKNTLLIMTSN+GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFL
Sbjct: 665 VDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFL 724
Query: 729 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 788
NRLDE+IVFRQL+K EVKEIA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGA
Sbjct: 725 NRLDEIIVFRQLSKNEVKEIAEIMLQEVFARLEDKGIKLSVTDAFKERLVEEGYNPSYGA 784
Query: 789 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
RPLRRA+MRLLEDS+AE++L+ IK+GD +VD+D + VT+ S + + LA
Sbjct: 785 RPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDDNKKVTINISSEESSQELA 838
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL++LG + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|428219225|ref|YP_007103690.1| ATPase [Pseudanabaena sp. PCC 7367]
gi|427991007|gb|AFY71262.1| ATPase AAA-2 domain protein [Pseudanabaena sp. PCC 7367]
Length = 831
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/751 (73%), Positives = 648/751 (86%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GGS G K PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVPS----GGSQGRTKTPTLDEFGSNLTQMASEGKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI DVPD ++ K+V+TL
Sbjct: 182 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRINDTDVPDILQEKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRSASNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLRERYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVYVGEPSVAETIEILYGLRERYEQHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ +D+AL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ
Sbjct: 362 KLKISDDALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK EA R Q+F+KAGELRDREM++K +I ++ + K+E +V PVV E DI
Sbjct: 422 VVKEKEEAARAQEFDKAGELRDREMEIKQEIRSIT----QAKKSEETGEEVSPVVDEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
+IVS+WTG+PV K++ ES +L++ME+TLH+R+IGQ+EAVKAISRAIRRARVGLK+P+R
Sbjct: 478 AYIVSSWTGVPVSKLTESESAKLMQMEDTLHQRIIGQEEAVKAISRAIRRARVGLKSPDR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALA Y+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFIFSGPTGVGKTELTKALATYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIM
Sbjct: 598 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIM 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKG +GFD+ DE++S Y RI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGAITLGFDIAEDEEESKYQRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTK EVKEIA+++LKEVF RL+ KDIEL VT +F +R+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 718 LTKDEVKEIANLLLKEVFVRLREKDIELSVTTKFMDRLVEEGYNPSYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE++L +++ G +V +DVD D +
Sbjct: 778 EDSLAEEILTGKVRAGAAVEMDVDDDNKIVC 808
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|123966412|ref|YP_001011493.1| ClpC [Prochlorococcus marinus str. MIT 9515]
gi|123200778|gb|ABM72386.1| ClpC [Prochlorococcus marinus str. MIT 9515]
Length = 843
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/775 (71%), Positives = 662/775 (85%), Gaps = 16/775 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ + VG G + GN K TL+E+GTNLTKLA E KLDPV
Sbjct: 126 NLGIDLTKVRTQVIRMLGETAD-VGTGGTSSNKGNLKTATLDEFGTNLTKLASESKLDPV 184
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TL
Sbjct: 185 VGRYEEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQLGEIPDILEDKRVLTL 244
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 245 DIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 304
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH
Sbjct: 305 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHH 364
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TD+AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA++++KELRQ
Sbjct: 365 RLKITDDALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQ 424
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE-------MSKAETEAGDV-- 490
+ K+K E+VR Q+F++AG+LR++E++L +I L+D KE + +ETE G +
Sbjct: 425 VQKQKEESVRDQNFDQAGQLREKEIELSEKIKELLDSKKESLDKNNSSNASETEDGGIDI 484
Query: 491 --GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIR 548
P+V+E D+ HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIR
Sbjct: 485 TQNPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSKAIR 544
Query: 549 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 608
RARVGLKNPNRPIASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSK
Sbjct: 545 RARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSK 604
Query: 609 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 668
LIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGR
Sbjct: 605 LIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGR 664
Query: 669 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEF 727
TVDFKNTLLIMTSN+GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEF
Sbjct: 665 TVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEF 724
Query: 728 LNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYG 787
LNRLDE+IVFRQLTK EVK+IA+IMLKEVF RL K I+L VTE F+ER+VEEGYNP+YG
Sbjct: 725 LNRLDEIIVFRQLTKNEVKDIAEIMLKEVFSRLNEKGIKLDVTEAFKERLVEEGYNPAYG 784
Query: 788 ARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
ARPLRRA+MRLLEDS+AE++L+ IK+GD +VD+D + VTV S + + LA
Sbjct: 785 ARPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDENKKVTVNISSEESSQELA 839
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL++LG + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|119512929|ref|ZP_01631992.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
gi|119462425|gb|EAW43399.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
Length = 823
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/750 (73%), Positives = 652/750 (86%), Gaps = 9/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G G + K PTL+E+G+NLT++A + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVSATGPSGRT---KTPTLDEFGSNLTQMAVDNKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ D+PD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDIPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 363 LKISDEALVAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVRGQDF+KAGELRDREM++K +I A+ + + T PVV E DI
Sbjct: 423 LKEKDDAVRGQDFDKAGELRDREMEIKGEIRAIA----QSKTSATGTEGEEPVVGEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 HIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+T
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG IGF+ D ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGIGFEFADDATETQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+K EV EIA+IMLKEVF RL K I L+VT+RF++R++EEGY+PSYGARPLRRAIMRLLE
Sbjct: 719 SKPEVTEIAEIMLKEVFGRLTEKGIVLEVTDRFKDRLIEEGYSPSYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE++L+ IK+GD+ +VDVD +G V V
Sbjct: 779 DSLAEEILSGRIKDGDTALVDVDENGIVQV 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|254431180|ref|ZP_05044883.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
gi|197625633|gb|EDY38192.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
Length = 843
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/774 (72%), Positives = 654/774 (84%), Gaps = 19/774 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E G G GS+ K PTL+E+G+NLT+ A +GKLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVAAGGGGKGST--KTPTLDEFGSNLTQQAADGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD +E K+V+TLD
Sbjct: 184 GRQHEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRINSGDVPDILEEKRVLTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV++TI+IL+GL+ERYE HH+
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEDTIEILRGLKERYEEHHR 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL++AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR +
Sbjct: 364 LKIADEALIAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPAAKEVDKQLRAV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA------------G 488
K+K EAVR QDF KAGELRDRE++L+ QI ++ K+ A EA
Sbjct: 424 QKQKEEAVREQDFTKAGELRDREVELREQIRTILQARKDEEPATAEASGETPAPVATDDA 483
Query: 489 DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIR 548
D P+V+E DI HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIR
Sbjct: 484 DRSPMVSEEDIAHIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVKAVSRAIR 543
Query: 549 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 608
RARVGLKNPNRPIASFIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSEFMERHTVSK
Sbjct: 544 RARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHTVSK 603
Query: 609 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 668
LIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGR
Sbjct: 604 LIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGR 663
Query: 669 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEF 727
TVDFKNTL+IMTSN+GS VIEKGG +GF+ D +++ YNRI+SLV EELKQYFRPEF
Sbjct: 664 TVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGSDAEETQYNRIRSLVNEELKQYFRPEF 723
Query: 728 LNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYG 787
LNRLDE+IVFRQLT+ EVKEIA+IMLKEVF R+ K I L VTE F+ER+VEEGYNPSYG
Sbjct: 724 LNRLDEIIVFRQLTRDEVKEIAEIMLKEVFGRMDEKGIHLSVTEAFKERLVEEGYNPSYG 783
Query: 788 ARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL--NGSSGAPE 839
ARPLRRA+MRLLEDS+AE+ L+ I EGDS +VDV+ D V +L N PE
Sbjct: 784 ARPLRRAVMRLLEDSLAEEFLSGRIGEGDSAVVDVNDDKQVVILKQNAIPAIPE 837
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|428211987|ref|YP_007085131.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000368|gb|AFY81211.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 822
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/753 (72%), Positives = 651/753 (86%), Gaps = 9/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G ++ K PTL+E+G NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTS---GASNARTKTPTLDEFGANLTQMAAEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSARNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILFGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA+LS +YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 363 LKISDEALDAAAKLSDRYISDRFLPDKAIDLVDEAGSRVRLINSQLPPAAKELDKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF++AGELRDREM++KA+I ++ K ++ PVVTE DI
Sbjct: 423 LKDKDDAVRSQDFDRAGELRDREMEIKAEIRSIASN----KKTGVSDSELSPVVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES++L+ ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNRP
Sbjct: 479 QIVASWTGVPVNKLTESESEKLMHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ + ++ D+ YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFEFEQNQADAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVK I++IMLKEVF RL K I L+VT+RF+ER++EEGYNP+YGARPLRRAIMRLLE
Sbjct: 719 VKDEVKLISEIMLKEVFSRLTEKGITLEVTDRFKERLIEEGYNPAYGARPLRRAIMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
D +AE++L+ +KEG++ +VD+ +G V V G
Sbjct: 779 DVLAEEILSGRVKEGETALVDIGEEGQVIVRPG 811
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|443329502|ref|ZP_21058087.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
gi|442790840|gb|ELS00342.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
Length = 822
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/752 (73%), Positives = 653/752 (86%), Gaps = 10/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQ+IRM+GE+ E GGGSSG NK PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQIIRMLGETAEV---ATGGGSSGRNKTPTLDEFGSNLTQMASEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANQDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRG 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I KEK++AVR QDF+KAG LRDREM++K QI + K ET + P V +I
Sbjct: 423 ILKEKDDAVRSQDFDKAGSLRDREMEIKEQIRNIASAKKSEEDTETNS----PFVDSEEI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKAISRAIRRARVGLKNPNR
Sbjct: 479 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFVFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + + ++ YNRIKSLV EELK YFRPEFLNRLDE+IVFRQ
Sbjct: 659 TSNIGSKVIEKGGGGLGFEFEDNAGEAQYNRIKSLVNEELKNYFRPEFLNRLDEIIVFRQ 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L+K EVKEIA+I+LKEVF RL K+I+L+VT++F+ER+V+EG+NP+YGARPLRRAIMRLL
Sbjct: 719 LSKDEVKEIAEILLKEVFTRLTEKEIDLEVTDKFKERLVDEGFNPAYGARPLRRAIMRLL 778
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
ED +AE++L+ + EGD+ +VDV+ +G V +L
Sbjct: 779 EDVLAEEILSGRLGEGDTAVVDVNEEGKVKIL 810
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|123968727|ref|YP_001009585.1| ClpC [Prochlorococcus marinus str. AS9601]
gi|123198837|gb|ABM70478.1| ClpC [Prochlorococcus marinus str. AS9601]
Length = 842
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/774 (70%), Positives = 658/774 (85%), Gaps = 15/774 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D + +RTQVIRM+GE+ E VG+G S K TL+E+GTNLTKLA E KLDPVV
Sbjct: 126 NLNIDLTKVRTQVIRMLGETAE-VGSGTSTTKSNQKTATLDEFGTNLTKLASESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RVVQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TLD
Sbjct: 185 GRYSEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+++TI+ILKGLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILKGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TD+AL +AA L +YISDR+LPDKAIDLIDEAGSRVRL +++LP EA++++KELRQ+
Sbjct: 365 LKITDDALEAAAHLGDRYISDRYLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD----------- 489
K+K E+VR Q+F++AG+LR++E++L A+I +++ KE ++ + D
Sbjct: 425 QKQKEESVRDQNFDQAGQLREKEIELSAKIKEVLENKKESAEEDQFNDDNKSVESDSKLY 484
Query: 490 VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRR 549
P+V+E D+ HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+SRAIRR
Sbjct: 485 QSPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSRAIRR 544
Query: 550 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 609
ARVGLKNPNRPIASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSKL
Sbjct: 545 ARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSKL 604
Query: 610 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 669
IGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGRT
Sbjct: 605 IGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGRT 664
Query: 670 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFL 728
VDFKNTLLIMTSN+GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEFL
Sbjct: 665 VDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEFL 724
Query: 729 NRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGA 788
NRLDE+IVFRQLTK EVK IA+IML+EVF RL+ K I+L VT+ F+ER+VEEGYNPSYGA
Sbjct: 725 NRLDEIIVFRQLTKNEVKHIAEIMLQEVFARLQDKGIKLDVTDAFKERLVEEGYNPSYGA 784
Query: 789 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
RPLRRA+MRLLEDS+AE++L+ IK+GD +VD+D + V + S + + LA
Sbjct: 785 RPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDDNKKVIINISSEESSQELA 838
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL++LG + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|755163|gb|AAB67745.1| ClpC [Synechococcus elongatus PCC 7942]
Length = 839
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/752 (73%), Positives = 649/752 (86%), Gaps = 9/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 83 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 140
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GGG K PTL+E+G+NLT+ A +GKLDPVV
Sbjct: 141 NLGVDLSKVRTQVIRMLGETAEV---STGGGQGRTKTPTLDEFGSNLTQQAADGKLDPVV 197
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD
Sbjct: 198 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVTLD 257
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 258 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 317
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EPSVD+TI+IL+GLRERYE HHK
Sbjct: 318 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMLGEPSVDDTIEILRGLRERYEQHHK 377
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+L+ +YISD FLPDKAIDLIDEAGSRVRL ++QL A+EL+KELRQ+
Sbjct: 378 LKIADEALEAAAKLADRYISDLFLPDKAIDLIDEAGSRVRLMNSQLAPAAKELDKELRQV 437
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF+KAGELRDREM++K QI ++ K + T D P+VTE DI
Sbjct: 438 LKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPIVTEEDIA 494
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES +LL MEETLH R+IGQDEAVKA+SRAIRRARVGLKNPNRP
Sbjct: 495 HIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRP 554
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 555 IASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 614
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFKNTL+I+T
Sbjct: 615 EGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFKNTLIILT 674
Query: 681 SNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
SN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 675 SNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 734
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIADIML+EVF R+ K I L VTE+F++R+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 735 LNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLL 794
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
EDS+AE+ L+ +++EGD+ +VD+ +G V VL
Sbjct: 795 EDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL 826
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 62/73 (84%)
Query: 89 KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + +
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 149 IRTQVIRMVGEST 161
R +V +++G +
Sbjct: 74 ARIEVEKIIGRGS 86
>gi|427717814|ref|YP_007065808.1| ATPase [Calothrix sp. PCC 7507]
gi|427350250|gb|AFY32974.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 822
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/751 (74%), Positives = 656/751 (87%), Gaps = 11/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E G G + K PTL+E+G+NLT++A + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVSATGQSGRT---KTPTLDEFGSNLTQMATDNKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA+ DVPD +E K+V+TLD
Sbjct: 183 GRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILHGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL++AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQI
Sbjct: 363 LKISDEALIAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTEVDI 499
KEK++AVR QDF+KAGELRDREM++KA+I A+ SK +GD V PVVTE DI
Sbjct: 423 LKEKDDAVRSQDFDKAGELRDREMEIKAEIRAIAQ-----SKTNGASGDGVEPVVTEEDI 477
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 478 AHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 537
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 PIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 597
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI+
Sbjct: 598 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIL 657
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG IGF+ D+ +S YNRIK+LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 658 TSNIGSKVIEKGGGGIGFEFGEDQSESQYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQ 717
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L+K+EV +IA+IMLKEVF RL K I L+VT+RF+ER++ EGY+PSYGARPLRRAIMRLL
Sbjct: 718 LSKVEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKERLITEGYSPSYGARPLRRAIMRLL 777
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE++L+ IK+GD IVDVD +G V V
Sbjct: 778 EDSLAEEILSGRIKDGDIAIVDVDENGIVQV 808
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|284929449|ref|YP_003421971.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
gi|284809893|gb|ADB95590.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
Length = 825
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/762 (72%), Positives = 654/762 (85%), Gaps = 10/762 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIR +GE+ E GV G + K PTL+E+G+NLT+LA +G+LDPVV
Sbjct: 126 NLGVDLSKVRTQVIRQLGETAEVAAGGVAPGRT--KTPTLDEFGSNLTQLATDGQLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E KKV+TLD
Sbjct: 184 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIADQDIPDILEDKKVVTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEI+Q++ IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMEEIRQTENIILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKD ALERRFQPV V EP+V+ET+QIL GLRERYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIEKDAALERRFQPVMVGEPTVEETVQILYGLRERYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELR I
Sbjct: 364 LKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPEAKELDKELRTI 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF AG+LRD+EM++K++I ++ K E E + P V +I
Sbjct: 424 LKQKDDAVRSQDFNHAGQLRDQEMEIKSKIRSI----SSTKKGEGENDE--PFVDSEEIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES++LL ME TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 478 HIVASWTGVPVNKLTETESEKLLNMETTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSE+AM+RLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 IASFIFSGPTGVGKTELTKALAAYFFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYVGYN 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTLLIMT
Sbjct: 598 EGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLLIMT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ + ++ D+ YNRI+SLV EELK+YFRPEFLNRLDE+IVFRQL
Sbjct: 658 SNIGSKVIEKGGGGLGFEFENNQADAQYNRIRSLVNEELKEYFRPEFLNRLDEIIVFRQL 717
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEI++I+LKEVF RL K+I LQVT++F+ER+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 718 NKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPSYGARPLRRAIMRLLE 777
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
D +AE++L+ +++EGD VD+D G V ++ P S++
Sbjct: 778 DILAEEILSGKVREGDIAEVDIDEQGQVKIIVAEDKQPHSIS 819
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|145356586|ref|XP_001422509.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
gi|144582752|gb|ABP00826.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
Length = 840
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/757 (75%), Positives = 668/757 (88%), Gaps = 6/757 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ LA EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELALEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN---KMPTLEEYGTNLTKLAEEGKLD 197
NL ADP+ IR+QVIRMVGE+ EAVGAG GGG K PTLEE+G++LTK AEEGKLD
Sbjct: 126 NLDADPAKIRSQVIRMVGETQEAVGAGAGGGQGAQSGSKTPTLEEFGSDLTKKAEEGKLD 185
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
P +GR +I RV QILGRRTKNNPCLIGEPGVGK+AIAEGLAQ+IA+ DVPDT++ K+++
Sbjct: 186 PCIGRANEIVRVTQILGRRTKNNPCLIGEPGVGKSAIAEGLAQKIAANDVPDTLDSKRMM 245
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
TLDMGLLVAGTKYRGEFEERLKKLM+E+K + IILFIDEVHTLIGAGAAEGAIDAANIL
Sbjct: 246 TLDMGLLVAGTKYRGEFEERLKKLMDEVKSDENIILFIDEVHTLIGAGAAEGAIDAANIL 305
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEPSVDETIQIL+GLRERYE+
Sbjct: 306 KPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVQVPEPSVDETIQILRGLRERYEL 365
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HHKL+Y D+AL++AA+ S QYISDRFLPDKAIDLIDEAGSRVRL +A LPEEA+EL+KEL
Sbjct: 366 HHKLKYDDDALIAAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLENAALPEEAKELDKEL 425
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV-GPVVTE 496
+ + KEK+ A+R QDFE AG LRDRE++L+AQI + ++ +E +KA+ E+GD GP V E
Sbjct: 426 KALMKEKDTAIRSQDFEAAGGLRDREVELRAQIKQITERKQEENKAKAESGDASGPTVVE 485
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI IV+AWTGIPV+KVS+DE RL+ MEETLHKR++GQ+EAV A +RAIRRAR GLKN
Sbjct: 486 QDIADIVAAWTGIPVDKVSSDEGTRLMDMEETLHKRLVGQEEAVVACARAIRRARTGLKN 545
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
PNRP+ASFIFSGPTGVGKSELAK+L+A+YFGSEEAM+RLDMSEFMERHTVSKLIGSPPGY
Sbjct: 546 PNRPVASFIFSGPTGVGKSELAKSLSAFYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGY 605
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY+EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR +DFKNTL
Sbjct: 606 VGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVIDFKNTL 665
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
+IMTSNVG+S IEKGG +GF LD + +D SYNRIKSLV E+LK YFRPEFLNRLDE+IV
Sbjct: 666 IIMTSNVGASAIEKGGGGLGFQLDDNAEDQSYNRIKSLVMEDLKNYFRPEFLNRLDEIIV 725
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
FRQL K EV+EIA IML+ VF RLK K+I L+ TERF++R+V+EG++P+YGARPLRRAIM
Sbjct: 726 FRQLNKQEVREIAYIMLENVFKRLKEKEIVLECTERFKDRLVDEGFSPAYGARPLRRAIM 785
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
RLLED+++EKML EI EG S I+DV+++G +TVL G
Sbjct: 786 RLLEDNLSEKMLTGEISEGSSCIMDVNAEGEITVLTG 822
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKV+MLAQEEARRLGHN++G+E ++LGL+ EG G+AA+VL+++G R
Sbjct: 1 MFERFTEKAIKVVMLAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|428770031|ref|YP_007161821.1| ATPase [Cyanobacterium aponinum PCC 10605]
gi|428684310|gb|AFZ53777.1| ATPase AAA-2 domain protein [Cyanobacterium aponinum PCC 10605]
Length = 822
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/750 (74%), Positives = 659/750 (87%), Gaps = 8/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D +RTQVIRM+GE TE GVGGGS NK PTL+E+G+NLT LA +GKLDPVV
Sbjct: 126 NLGVDLGKVRTQVIRMLGE-TETTAVGVGGGSRSNKTPTLDEFGSNLTVLAVDGKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TLD
Sbjct: 185 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDLLEEKRVVTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D AL RRFQPV V EPSV+ETI+IL GLRE+YE HHK
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALARRFQPVMVGEPSVEETIEILFGLREKYEQHHK 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP EA+EL++ELRQ+
Sbjct: 365 LKIADEALAAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLLNSQLPPEAKELDQELRQV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+EAVR QDF+KAGELRDREM++KA+I +L D+ K+ + P+V E +I
Sbjct: 425 LKEKDEAVRSQDFDKAGELRDREMEIKAEIRSLADQKKKSADIND-----NPIVDEEEIA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV+K++ E+D+LL MEETLH+R+IGQ++AVKAISRAIRRARVGLKNPNRP
Sbjct: 480 HIVASWTGVPVQKLTESEADKLLHMEETLHQRIIGQEDAVKAISRAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 540 IASFIFSGPTGVGKTELTKALATYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 600 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIMT 659
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L+ D+ +S YNRI+SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 660 SNIGSKVIEKGGGGLGFELEEDQNESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQL 719
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEI++I+LKEVF RL ++I LQVT++F+ER++EEG+NP+YGARPLRRAIMRLLE
Sbjct: 720 NKEEVKEISEILLKEVFARLTEQEITLQVTDKFKERLIEEGFNPAYGARPLRRAIMRLLE 779
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D +AE++L++ ++EGDS IVD+ DG V +
Sbjct: 780 DILAEEILSKRLQEGDSAIVDIGEDGKVII 809
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|218438847|ref|YP_002377176.1| ATPase AAA [Cyanothece sp. PCC 7424]
gi|218171575|gb|ACK70308.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7424]
Length = 821
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/754 (72%), Positives = 654/754 (86%), Gaps = 12/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E GG ++G NK PTL+E+G+NLT++A EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVAA---GGPTTGRNKTPTLDEFGSNLTQMAAEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL +QLP A+EL+KELRQ
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLITSQLPPAAKELDKELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVR QDF++AGELRDREM++K++I A+ K + + P V +I
Sbjct: 423 ILKQKDDAVRAQDFDRAGELRDREMEIKSEIRAIASAKKNEGEGDE------PHVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
+IV++WTGIPV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 ANIVASWTGIPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNILLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFETDQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L + EV +IADI+LKEVF RL K I L+VT++F++R+VEEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNRDEVTDIADILLKEVFGRLTEKGITLEVTQKFKDRLVEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
ED +AE++L+ +KEGD+ + D+D +G V +L G
Sbjct: 777 EDVLAEEILSGRVKEGDTAVADIDEEGKVKILPG 810
>gi|434389096|ref|YP_007099707.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
gi|428020086|gb|AFY96180.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
Length = 833
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/751 (72%), Positives = 654/751 (87%), Gaps = 6/751 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE++E AG G SSG NK PTL+E+G+NLT+LA +GKLDPV
Sbjct: 126 NLGVDLTKVRTQVIRMLGETSETATAGTGARSSGSNKTPTLDEFGSNLTQLAHDGKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 186 VGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANQDIPDILEDKRVVTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILHGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ TD AL +AA+L+ +YISDRFLPDKAIDL+DEAGSRVRL ++QLP A+EL+KELR+
Sbjct: 366 KLKITDLALEAAAKLADRYISDRFLPDKAIDLMDEAGSRVRLLNSQLPAAAKELDKELRK 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK+EAVR QDF+KAG L+DRE+++KA+I ++ K + E V P VTE DI
Sbjct: 426 VLKEKDEAVRSQDFDKAGSLKDREIEIKAEIKSIAQAKKTSDETEDR---VMPEVTEEDI 482
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES +LL MEETLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNR
Sbjct: 483 AQIVASWTGVPVSKLTESESVKLLNMEETLHQRLIGQEEAVKAVSRAIRRARVGLKNPNR 542
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALA Y+FGSE++MIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 543 PIASFIFSGPTGVGKTELTKALATYFFGSEDSMIRLDMSEYMERHTVSKLIGSPPGYVGY 602
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
+EGGQLTEAVRR+PYTVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+
Sbjct: 603 SEGGQLTEAVRRKPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIIL 662
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSNVGS VIEKGG +GF+ ++ +++YNRI+SLV EELK YFRPEFLNRLDE+IVF+Q
Sbjct: 663 TSNVGSKVIEKGGGGLGFEFSDNKTEATYNRIRSLVNEELKNYFRPEFLNRLDEIIVFQQ 722
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LTK EVK+IADIMLK++F RL + I L+VT+RF++R+++EGYNP+YGARPLRRAIMRLL
Sbjct: 723 LTKPEVKQIADIMLKDLFTRLTQQGIHLEVTDRFKDRLIDEGYNPAYGARPLRRAIMRLL 782
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
ED +AE+ML+ +K+GD+ IVD+ DG V
Sbjct: 783 EDILAEEMLSGRLKDGDTSIVDMGEDGKAIV 813
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGINLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|33240557|ref|NP_875499.1| Clp protease ATP-binding subunit [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238085|gb|AAQ00152.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 856
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/786 (70%), Positives = 664/786 (84%), Gaps = 30/786 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E V AG G G K TL+E+GTNLTKLA E KLDPVV
Sbjct: 126 NLGVDLTKVRTQVIRMLGETAE-VSAGGGSGKGSIKTATLDEFGTNLTKLASESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD
Sbjct: 185 GRHDEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EPS+++TI+ILKGLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMIGEPSIEDTIEILKGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA++++KELR++
Sbjct: 365 LKITDEALNAAANLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKQVDKELRKV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVG-------- 491
KEK EAVR QDF KAGELR++E++L+ +I +++D K+ S ++ ++ DV
Sbjct: 425 QKEKEEAVRDQDFTKAGELREKEVELRDKIRSILDNSKQDSSNSKNDSEDVALVKNDESK 484
Query: 492 ---------------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 536
P+V E DI HIV++WTG+PV+K++ ES +LL ME+TLH+R+IGQ
Sbjct: 485 NEINNSTKEEINQTMPMVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQ 544
Query: 537 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 596
DEAVK++S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLD
Sbjct: 545 DEAVKSVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLD 604
Query: 597 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 656
MSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+
Sbjct: 605 MSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQL 664
Query: 657 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLV 715
LE+GRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF++ + +DS YNRIKSLV
Sbjct: 665 LEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEMAGESVEDSQYNRIKSLV 724
Query: 716 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 775
EELKQYFRPEFLNRLDE+IVFRQLT++EVK+IA+IMLKEVF R+K K I L V+E F+E
Sbjct: 725 NEELKQYFRPEFLNRLDEIIVFRQLTRMEVKDIAEIMLKEVFSRIKDKGITLSVSEAFKE 784
Query: 776 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV--LNG 833
R+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK+GD VD+D + NV V ++
Sbjct: 785 RLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKDGDQAEVDIDENKNVIVKHIDK 844
Query: 834 SSGAPE 839
+S PE
Sbjct: 845 NSNKPE 850
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|126657032|ref|ZP_01728203.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
gi|126621575|gb|EAZ92285.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
Length = 822
Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/756 (72%), Positives = 653/756 (86%), Gaps = 12/756 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIR +GE+ E GGG+ G K PTL+E+G+NLT+LA +G+LDPV
Sbjct: 126 NLGVDLSKVRTQVIRQLGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAADGQLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRT 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVR QDF++AGELRD+EMD+K QI ++ K E E + P V +I
Sbjct: 423 ILKQKDDAVRSQDFDRAGELRDQEMDIKEQIRSI----SSAKKGEGENDE--PFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALA Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFVFSGPTGVGKTELTKALATYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEI++I+LKEVF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
ED +AE++L+ + EGD +VD+ DG V V++G +
Sbjct: 777 EDVLAEEILSGRVGEGDIAVVDIGEDGKVKVVSGDT 812
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|318040228|ref|ZP_07972184.1| ATPase [Synechococcus sp. CB0101]
Length = 853
Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/785 (71%), Positives = 659/785 (83%), Gaps = 26/785 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E V +G GGG K PTL+E+G+NLT+ A +GKLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAE-VASGGGGGKGSTKTPTLDEFGSNLTQQAADGKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD +E K+V+TLD
Sbjct: 185 GRQHEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRINSGDVPDILEDKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV+V EPSVD+TI+IL+GL+ERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVQVGEPSVDDTIEILRGLKERYEAHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L DEALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR +
Sbjct: 365 LTIADEALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPAAKEVDKQLRAV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAET-EAG----------- 488
KEK +AVR QDF KAGELRD+E++L+ QI +++ KE +A+ EAG
Sbjct: 425 QKEKEDAVREQDFTKAGELRDKEVELRDQIRSILQTRKEEPEAQVAEAGSEATAETSAPA 484
Query: 489 ----------DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDE 538
D P+VTE DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDE
Sbjct: 485 ATAVAEAPADDRTPMVTEEDIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDE 544
Query: 539 AVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMS 598
AVKA+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMS
Sbjct: 545 AVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMS 604
Query: 599 EFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILE 658
EFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LE
Sbjct: 605 EFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLE 664
Query: 659 DGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTE 717
DGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ D ++++YNRI+SLV E
Sbjct: 665 DGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGADAEETNYNRIRSLVNE 724
Query: 718 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERV 777
ELKQYFRPEFLNRLDE+IVFRQL++ EVKEIA+IMLKEVF R+ K I L VTE F+ER+
Sbjct: 725 ELKQYFRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFSRMSEKGIHLSVTEAFKERL 784
Query: 778 VEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 837
VEEGYNPSYGARPLRRA+MRLLEDS+AE+ L+ I EGDS +VDVD + V + A
Sbjct: 785 VEEGYNPSYGARPLRRAVMRLLEDSLAEEFLSGRIGEGDSAVVDVDDNKQVVIRKQGEAA 844
Query: 838 PESLA 842
+LA
Sbjct: 845 IPALA 849
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|308811204|ref|XP_003082910.1| Chaperone HSP104 and related ATP-dependent Clp proteases (ISS)
[Ostreococcus tauri]
gi|116054788|emb|CAL56865.1| Chaperone HSP104 and related ATP-dependent Clp proteases (ISS),
partial [Ostreococcus tauri]
Length = 781
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/757 (75%), Positives = 670/757 (88%), Gaps = 6/757 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ LA EEAR+LGHNYIG+EHLLLGLLREGEGVAARVLE
Sbjct: 9 GRGSGFV--AVEIPFTPRAKRVLELALEEARQLGHNYIGTEHLLLGLLREGEGVAARVLE 66
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG---NKMPTLEEYGTNLTKLAEEGKLD 197
NL ADP+ IR+QVIRMVGE+ EAVGAG G G +K PTLEE+G++LTK AEEGKLD
Sbjct: 67 NLDADPAKIRSQVIRMVGETQEAVGAGAGCGQGAQAGSKTPTLEEFGSDLTKKAEEGKLD 126
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
P +GR +I RV QILGRRTKNNPCLIGEPGVGK+AIAEGLAQ+IA+ DVPDT++ K+++
Sbjct: 127 PCIGRVNEIIRVTQILGRRTKNNPCLIGEPGVGKSAIAEGLAQKIATNDVPDTLDSKRMM 186
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
TLDMGLLVAGTKYRGEFEERLKKLM+E+K + IILFIDEVHTLIGAGAAEGAIDAANIL
Sbjct: 187 TLDMGLLVAGTKYRGEFEERLKKLMDEVKNDENIILFIDEVHTLIGAGAAEGAIDAANIL 246
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGELQCIGATT+DEYRKHIEKDPALERRFQPV+VPEP+VDETIQIL+GLRERYE+
Sbjct: 247 KPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVQVPEPTVDETIQILRGLRERYEL 306
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HHKL+Y+D+AL++AA+ S QYISDRFLPDKAIDLIDEAGSRVRL +A LPEEA+EL+KEL
Sbjct: 307 HHKLKYSDDALIAAAKFSSQYISDRFLPDKAIDLIDEAGSRVRLANAALPEEAKELDKEL 366
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD-VGPVVTE 496
+ + KEK+ A+R QDFE AG LRDRE++L+AQI + ++ +E S+A++E+GD GP V E
Sbjct: 367 KALMKEKDNAIRSQDFEAAGGLRDREVELRAQIKQITERKQEESRAKSESGDETGPQVVE 426
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI +V+AWTGIPV+KVS+DE RL+ MEETLHKR++GQ+EAV A +RAIRRAR GLKN
Sbjct: 427 QDIADVVAAWTGIPVDKVSSDEGTRLMAMEETLHKRLVGQEEAVVACARAIRRARTGLKN 486
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
PNRP+ASFIFSGPTGVGKSELAK+L+++YFGSE+AM+RLDMSEFMERHTVSKLIGSPPGY
Sbjct: 487 PNRPVASFIFSGPTGVGKSELAKSLSSFYFGSEDAMVRLDMSEFMERHTVSKLIGSPPGY 546
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY+EGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR VDFKNTL
Sbjct: 547 VGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVVDFKNTL 606
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
+IMTSNVG+S IEKGG +GF LD + +D SYNRIKSLV E+LK YFRPEFLNRLDE+IV
Sbjct: 607 IIMTSNVGASAIEKGGGGLGFQLDDNAEDQSYNRIKSLVMEDLKNYFRPEFLNRLDEIIV 666
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
FRQL K EV+EIA IML+ VF RLK K+I L+ TERF++R+V+EG++P+YGARPLRRAIM
Sbjct: 667 FRQLNKQEVREIAYIMLENVFKRLKEKEITLECTERFKDRLVDEGFSPAYGARPLRRAIM 726
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
RLLED+++EKML EI EG S I+DV+++G +TVL G
Sbjct: 727 RLLEDNLSEKMLTGEISEGSSCIMDVNAEGEITVLTG 763
>gi|416380079|ref|ZP_11684027.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
gi|357265734|gb|EHJ14459.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
Length = 809
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/760 (72%), Positives = 654/760 (86%), Gaps = 14/760 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 54 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 111
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG + S +RTQVIR +GE+ E GGG+ G K PTL+E+G+NLT+LA +G+LDPV
Sbjct: 112 NLGVNLSKVRTQVIRQLGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAGDGQLDPV 168
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 169 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 228
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 229 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 288
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDET++IL GLRERYE HH
Sbjct: 289 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETVEILFGLRERYEQHH 348
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 349 KLKILDEALDAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRT 408
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTEVD 498
I K+K++AVR QDF++AGELRD+EMD+K QI + +S A+ GD P V +
Sbjct: 409 ILKQKDDAVRSQDFDRAGELRDQEMDIKEQI-------RSISTAKKGEGDSAEPFVDAEE 461
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPN
Sbjct: 462 IAHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPN 521
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASF+FSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 522 RPIASFVFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVG 581
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI
Sbjct: 582 YNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLI 641
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
MTSN+GS VIEKGG +GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 642 MTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFR 701
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QL K EVKEI++I+LKEVF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRL
Sbjct: 702 QLNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRL 761
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP 838
LED +AE++L+ + EGD +VD+ DG V V++ P
Sbjct: 762 LEDVLAEEILSGRVGEGDVAVVDIGEDGKVQVVSNEKQQP 801
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 46/57 (80%)
Query: 105 LAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
+AQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R +V +++G +
Sbjct: 1 MAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGS 57
>gi|172039160|ref|YP_001805661.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354552562|ref|ZP_08971870.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171700614|gb|ACB53595.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353555884|gb|EHC25272.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 822
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/756 (72%), Positives = 653/756 (86%), Gaps = 12/756 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIR +GE+ E GGG+ G K PTL+E+G+NLT+LA +G+LDPV
Sbjct: 126 NLGVDLSKVRTQVIRQLGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAADGQLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRT 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVR QDF++AGELRD+EMD+K QI ++ K E E + P V +I
Sbjct: 423 ILKQKDDAVRSQDFDRAGELRDQEMDIKEQIRSI----SSAKKGEGENDE--PFVDSEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFVFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVK+I++I+LKEVF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKQISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
ED +AE++L+ + EGD +VD+ DG V V++G +
Sbjct: 777 EDVLAEEILSGRVGEGDVAVVDIGEDGKVKVVSGDT 812
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33634221|emb|CAE19547.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 842
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/775 (71%), Positives = 658/775 (84%), Gaps = 17/775 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E VG+G G + GN K TL+E+GTNLTKLA E KLDPV
Sbjct: 126 NLGIDLTKVRTQVIRMLGETAE-VGSG-GSSNKGNLKTATLDEFGTNLTKLASESKLDPV 183
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TL
Sbjct: 184 VGRYAEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQLGEIPDILEDKRVLTL 243
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 244 DIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 303
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+ +TI+ILKGLRERYE HH
Sbjct: 304 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIADTIEILKGLRERYEQHH 363
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TD AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA++++KELRQ
Sbjct: 364 RLKITDNALEAAAHLGDRYISDRFLPDKAIDLIDEAGSRVRLINSKLPPEAKQIDKELRQ 423
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE--------TEAGDV- 490
+ K+K E+VR Q+F++AG LR++E++L A+I L++ KE S+ TE
Sbjct: 424 VQKQKEESVRDQNFDQAGVLREKEIELSAKIKELLENKKESSEKNEISNANETTENNSTI 483
Query: 491 --GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIR 548
P+V+E D+ HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIR
Sbjct: 484 IHDPLVSEEDVAHIVASWTGVPVQKLTETESVKLLNMEETLHQRLIGQDEAVKAVSKAIR 543
Query: 549 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 608
RARVGL+NPNRPIASFIFSGPTGVGK+EL K+LA+Y+FGSEEAMIRLDMSEFMERHTVSK
Sbjct: 544 RARVGLQNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHTVSK 603
Query: 609 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 668
LIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN++LQ+LEDGRLTDSKGR
Sbjct: 604 LIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDSKGR 663
Query: 669 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEF 727
TVDFKNTLLIMTSN+GS VIEKGG +GF+ D +DS YNRIKSLV EELKQYFRPEF
Sbjct: 664 TVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFRPEF 723
Query: 728 LNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYG 787
LNRLDE+IVFRQL+K EVK+IA+IMLKEVF RL K I+L VT+ F+ER+VEEGYNP+YG
Sbjct: 724 LNRLDEIIVFRQLSKNEVKDIAEIMLKEVFSRLNEKGIKLDVTDAFKERLVEEGYNPAYG 783
Query: 788 ARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
ARPLRRA+MRLLEDS+AE++L+ IK+GD IVD+D + V V + + + LA
Sbjct: 784 ARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAIVDIDENKKVIVNISTEESSQELA 838
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL++LG + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|170076773|ref|YP_001733411.1| endopeptidase Clp, ATP-binding subunit C [Synechococcus sp. PCC
7002]
gi|169884442|gb|ACA98155.1| endopeptidase Clp, ATP-binding chain C, protease regulatory subunit
[Synechococcus sp. PCC 7002]
Length = 821
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/750 (73%), Positives = 656/750 (87%), Gaps = 10/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG GG S NK PTL+E+G+NLT+LA++GKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VAAG-GGSSRSNKTPTLDEFGSNLTQLAKDGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI++GDVPD +E K+V+TLD
Sbjct: 184 GRQNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISNGDVPDILEEKRVVTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILFGLRERYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELR +
Sbjct: 364 LKILDEALDAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPEAKELDKELRDV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K+EAVR QDF+KAGELRDREM++K +I A+ KE + D+ VV +I
Sbjct: 424 LKQKDEAVRSQDFDKAGELRDREMEIKTEIRAIAASQKEKN------SDIDAVVDAEEIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+P+ K++ ES +LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNRP
Sbjct: 478 HIVASWTGVPLNKLTESESTKLLNMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 538 IASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+T
Sbjct: 598 EGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIILT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 658 SNIGSKVIEKGGGGLGFEFGEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 717
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEI++I+LK+VF RL ++IELQVT++F+ER+VEEGYNPSYGARPLRRAIMRLLE
Sbjct: 718 NKEEVKEISEILLKDVFKRLTEQEIELQVTDKFKERLVEEGYNPSYGARPLRRAIMRLLE 777
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D +AE++L+ + GD+ IVD++ +G V V
Sbjct: 778 DVLAEEILSGRVGSGDTAIVDINEEGKVAV 807
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 59/71 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL ++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|218246261|ref|YP_002371632.1| ATPase AAA [Cyanothece sp. PCC 8801]
gi|218166739|gb|ACK65476.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8801]
Length = 822
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/752 (73%), Positives = 652/752 (86%), Gaps = 12/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIR +GE+ E GGG+SG K PTL+E+G+NLT LA EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRQLGETAEVAA---GGGTSGRTKTPTLDEFGSNLTNLAGEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRG 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVR QDF+KAGELRDREM++KA+I A+ S + E + P V +I
Sbjct: 423 ILKQKDDAVRAQDFDKAGELRDREMEIKAEIRAI------SSSKKAEGDNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + ++ ++ YNRI+SLV EELK YFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFEENQNEAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEI++I+LKEVF RL K I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEISEILLKEVFKRLTEKHINLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
ED +AE++L+ + EGD+ +VD+D DG V V+
Sbjct: 777 EDVLAEEILSGRVGEGDTAMVDIDEDGKVKVI 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
gi|67857006|gb|EAM52246.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
Length = 823
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/760 (72%), Positives = 653/760 (85%), Gaps = 14/760 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG + S +RTQVIR +GE+ E GGG+ G K PTL+E+G+NLT+LA EG+LDPV
Sbjct: 126 NLGVNLSKVRTQVIRQLGETAEVAA---GGGTPGRTKTPTLDEFGSNLTQLAGEGQLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVDET++IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETVEILFGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 363 KLKILDEALDAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRT 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTEVD 498
I K+K++AVR QDF++AGELRD+EMD+K QI + +S A+ GD P V +
Sbjct: 423 ILKQKDDAVRSQDFDRAGELRDQEMDIKEQI-------RSISTAKKGEGDSAEPFVDAEE 475
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPN
Sbjct: 476 IAQIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPN 535
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASF+FSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 536 RPIASFVFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVG 595
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLI
Sbjct: 596 YNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLI 655
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
MTSN+GS VIEKGG +GF+ + D+ ++ YNRI++LV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 656 MTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFR 715
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QL K EVKEI++I+LKEVF RL K+I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRL
Sbjct: 716 QLNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRL 775
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP 838
LED +AE++L+ + EGD +VD+ DG V V++ P
Sbjct: 776 LEDVLAEEILSGRVGEGDVAVVDIGEDGKVQVVSNEKQQP 815
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
gi|35212631|dbj|BAC90005.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
Length = 819
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/751 (71%), Positives = 651/751 (86%), Gaps = 10/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GG + K PTL+E+G+NLT++A EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEV---SAGGNTGRTKTPTLDEFGSNLTQMAAEGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI++ D+PD + K+V+TLD
Sbjct: 183 GREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISNNDIPDILADKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + ++L IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRAAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+VDETI+IL+GLRERYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILRGLRERYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TDEAL++AAQLS +YISDR+LPDKAIDL+DEAGSRVRL +QLP A+EL+KELRQI
Sbjct: 363 LKITDEALIAAAQLSDRYISDRYLPDKAIDLVDEAGSRVRLLSSQLPPAAKELDKELRQI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK++AVRGQD+E+AGELRDREM++K+QI ++ + K+ET A + P VTE DI
Sbjct: 423 LKEKDDAVRGQDYERAGELRDREMEIKSQIRSIA----QARKSET-ANEESPNVTEEDIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+IVS+WTG+PV K++ E+++LL ME+ LH+R+IGQ+EAVKAISRAIRRARVGLKNP RP
Sbjct: 478 YIVSSWTGVPVSKLTESETEKLLHMEDVLHQRLIGQEEAVKAISRAIRRARVGLKNPKRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAK+LA Y+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 538 IASFIFSGPTGVGKTELAKSLATYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTL+IMT
Sbjct: 598 EGGQLTEAVRRRPYTVILFDEIEKAHPDVFNVLLQILEDGRLTDAKGRTVDFKNTLMIMT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGS VIEKGG +GF+ E++ YNRI LV EELKQYFRPEFLNRLDE+IVF L
Sbjct: 658 SNVGSKVIEKGGGGLGFNTAGTEEEQRYNRISELVKEELKQYFRPEFLNRLDEIIVFHPL 717
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
T+ EVK+IA IML+EVF RL+ +++++++T+ F +++EEGY+ +YGARPLRRAI R+LE
Sbjct: 718 TREEVKQIAVIMLREVFARLEEQNMKIEITDAFNRKLIEEGYSATYGARPLRRAIQRMLE 777
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
D +AE++LA +KEGD+V+VDVDSDG T +
Sbjct: 778 DQLAEEILAARLKEGDTVLVDVDSDGKPTFI 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|427722144|ref|YP_007069421.1| ATPase [Leptolyngbya sp. PCC 7376]
gi|427353864|gb|AFY36587.1| ATPase AAA-2 domain protein [Leptolyngbya sp. PCC 7376]
Length = 820
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/750 (73%), Positives = 656/750 (87%), Gaps = 10/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG GGS NK PTL+E+G+NLT+LA++ KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VAAG-SGGSRSNKTPTLDEFGSNLTQLAKDSKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI++GDVPD +E K+V+TLD
Sbjct: 184 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISTGDVPDILEEKRVVTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+E++Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMDEVRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV+ETI+IL GLRERYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILFGLRERYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP EA+EL+KELR +
Sbjct: 364 LKILDEALDAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLINSQLPAEAKELDKELRGV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+EAVR Q+F+KAGELRDREM +KA+I A+ KE + D+ VV +I
Sbjct: 424 LKEKDEAVRSQEFDKAGELRDREMSIKAEIRAIAASQKE------KKTDIDAVVDAEEIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+P+ K++ ES +LL ME+TLH+R+IGQ+EAV+A+SRAIRRARVGLKNPNRP
Sbjct: 478 HIVASWTGVPLNKLTESESTKLLNMEDTLHQRLIGQEEAVRAVSRAIRRARVGLKNPNRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL K+LAAY+FGSE+AMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 538 IASFVFSGPTGVGKTELTKSLAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNTL+I+T
Sbjct: 598 EGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIILT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 658 SNIGSKVIEKGGGGLGFEFGDDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 717
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVKEI++I+LK+VF RL ++IELQVTE+F+ER+VEEGYNP+YGARPLRRAIMRLLE
Sbjct: 718 TKDEVKEISEILLKDVFQRLTEQEIELQVTEKFKERLVEEGYNPAYGARPLRRAIMRLLE 777
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D +AE++L+ + GD+ +VD++ +G V V
Sbjct: 778 DVLAEEILSGRVSSGDTALVDINEEGKVAV 807
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL ++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|257059311|ref|YP_003137199.1| AAA ATPase [Cyanothece sp. PCC 8802]
gi|256589477|gb|ACV00364.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8802]
Length = 822
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/752 (73%), Positives = 652/752 (86%), Gaps = 12/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIR +GE+ E GGG+SG K PTL+E+G+NLT LA EGKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRQLGETAEVAA---GGGTSGRTKTPTLDEFGSNLTNLAGEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPD +E K+V+TL
Sbjct: 183 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVVTL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 243 DIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V+ETI+IL GLRERYE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVNETIEILYGLRERYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ DEAL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL+KELR
Sbjct: 363 KLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELRG 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
I K+K++AVR QDF+KAGELRDREM++KA+I A+ S + E + P V +I
Sbjct: 423 ILKQKDDAVRAQDFDKAGELRDREMEIKAEIRAI------SSSKKAEGDNDEPFVDAEEI 476
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME+TLH+R+IGQ++AVKA+SRAIRRARVGLKNPNR
Sbjct: 477 AHIVASWTGVPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNR 536
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 537 PIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHTVSKLIGSPPGYVGY 596
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 597 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 656
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ + ++ ++ YNRI+SLV EELK YFRPEFLNRLDE+IVFRQ
Sbjct: 657 TSNIGSKVIEKGGGGLGFEFEENQNEAQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQ 716
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEI++I+LKEVF RL K I LQVT++F+ER+VEEGYNP+YGARPLRRAIMRLL
Sbjct: 717 LNKEEVKEISEILLKEVFKRLTEKHINLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLL 776
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
ED +AE++L+ + EGD+ +VD+D DG V V+
Sbjct: 777 EDVLAEEILSGRVGEGDTAMVDIDEDGKVKVI 808
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|149071968|ref|YP_001293474.1| Clp protease ATP binding subunit [Rhodomonas salina]
gi|134302919|gb|ABO70723.1| Clp protease ATP binding subunit [Rhodomonas salina]
Length = 819
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/737 (73%), Positives = 636/737 (86%), Gaps = 13/737 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D S +RTQVIR++G++ E GGG + K PTLEE+GTNLT+ A EGKLDPV+
Sbjct: 126 NLALDLSKVRTQVIRLLGDTAEVTA---GGGQNKGKTPTLEEFGTNLTQKAAEGKLDPVI 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRITNRDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+++EI+ ++ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGE+QCIGATTL+EYRKHIEKD ALERRFQPV V EPSV+ETI+IL GLR+RYE HHK
Sbjct: 303 LARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEAL +AA+ + QYI+DRFLPDKAIDLIDEAGSRVRL H+QLP AREL+KELR+I
Sbjct: 363 LVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMHSQLPPAARELDKELREI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD--KGKEMSKAETEAGDVGPVVTEVD 498
K+K+EAVRGQDFE AG+LRDREM++KAQI+A+ KG+E + E VVTE D
Sbjct: 423 LKQKDEAVRGQDFEVAGQLRDREMEIKAQIAAIAQSKKGEEDTSKEV------SVVTEED 476
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I IV+AWTGIPV K++ ES++LL ME+TLH R+IGQDEAV A+S+AIRRARVGLKNPN
Sbjct: 477 IAQIVAAWTGIPVNKMTRSESEKLLHMEDTLHGRIIGQDEAVVAVSKAIRRARVGLKNPN 536
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 537 RPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVG 596
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTE+VRRRPYTVVLFDEIEK HPDVFN++LQILEDGRLTDSKGRTVDFKNTLLI
Sbjct: 597 YNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLI 656
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
+TSNVGS VIEKGG +GF+ D+ DS Y RIK+LV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 657 LTSNVGSKVIEKGGGGLGFEFSEDQADSQYGRIKALVNEELKQYFRPEFLNRLDEIIVFR 716
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK EV EIA+IMLKEVF R+ K I+L+VT RF+ +++EGYNP YGARPLRRA+MRL
Sbjct: 717 QLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLIDEGYNPIYGARPLRRAVMRL 776
Query: 799 LEDSMAEKMLAREIKEG 815
LED+++E+ L+ +IKEG
Sbjct: 777 LEDTLSEEFLSEKIKEG 793
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|300864107|ref|ZP_07109004.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300337892|emb|CBN54150.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 823
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/734 (74%), Positives = 635/734 (86%), Gaps = 10/734 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D S +RTQVIRM+GE+ E G S+G K PTL+E+G NLT++A +GKLDPV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAEVTA----GSSTGRTKTPTLDEFGANLTQMAVDGKLDPV 181
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+PD +E K+V+TL
Sbjct: 182 VGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEDKRVVTL 241
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 242 DIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 301
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V+ETI+IL GLRERYE HH
Sbjct: 302 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVEETIEILFGLRERYEQHH 361
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL+ D AL +AA+LS +YISDR+LPDKAIDL+DEAGSRVRL +QLP A+EL+KELRQ
Sbjct: 362 KLKILDSALEAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLLSSQLPPAAKELDKELRQ 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK+EAVR QDF+KAGELRDREM++KA+I A+ K K++T DV P VTE DI
Sbjct: 422 VLKEKDEAVRSQDFDKAGELRDREMEIKAEIRAISQTKKTEGKSDT---DVSPNVTEEDI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES++LL ME+TLH+R+IGQ+EAVKA+SRAIRRARVGLKNPNR
Sbjct: 479 AQIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS+VIEKGG IGF+ ++ D+ YNRI+SLV EELK+YFRPEFLNRLDE+IVFRQ
Sbjct: 659 TSNIGSTVIEKGGTGIGFEFADNQADAQYNRIRSLVNEELKRYFRPEFLNRLDEIIVFRQ 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L E+KEIA IML EVF RL K I L VTE F+ER+V+EGYN SYGARPLRRAIMRLL
Sbjct: 719 LIMDEIKEIAVIMLNEVFGRLTEKGITLDVTEAFKERLVKEGYNQSYGARPLRRAIMRLL 778
Query: 800 EDSMAEKMLAREIK 813
ED +AE++L+ IK
Sbjct: 779 EDVLAEEILSGRIK 792
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|56751262|ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
gi|56686221|dbj|BAD79443.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
Length = 839
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/752 (73%), Positives = 649/752 (86%), Gaps = 9/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 83 GRGSGFVAAEI--PFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 140
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E GGG K PTL+E+G+NLT+ A +GKLDPVV
Sbjct: 141 NLGVDLSKVRTQVIRMLGETAEV---STGGGQGRTKTPTLDEFGSNLTQQAADGKLDPVV 197
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+GD+PD +E K+V+TLD
Sbjct: 198 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVTLD 257
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + ++IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 258 IGLLVAGTKYRGEFEERLKKIMDEIRSAGDVILVIDEVHTLIGAGAAEGAIDAANILKPA 317
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSVD+TI+IL+GLRERYE HHK
Sbjct: 318 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRERYEQHHK 377
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ DEAL +AA+L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+EL+KELRQ+
Sbjct: 378 LKIADEALEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQV 437
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K++AVR QDF+KAGELRDREM++K QI ++ K + T D P+VTE DI
Sbjct: 438 LKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPIVTEEDIA 494
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTG+PV K++ ES +LL MEETLH R+IGQDEAVKA+SRAIRRARVGLKNPNRP
Sbjct: 495 HIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRP 554
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 555 IASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 614
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVL DEIEKAHPDV N++LQ+LEDGRLTD+KGRTVDFKNTL+I+T
Sbjct: 615 EGGQLTEAVRRRPYTVVLLDEIEKAHPDVLNLLLQLLEDGRLTDAKGRTVDFKNTLIILT 674
Query: 681 SNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
SN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLDE+IVF Q
Sbjct: 675 SNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFCQ 734
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVKEIADIML+EVF R+ K I L VTE+F++R+VEEGYNPSYGARPLRRAIMRLL
Sbjct: 735 LNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLL 794
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
EDS+AE+ L+ +++EGD+ +VD+ +G V VL
Sbjct: 795 EDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL 826
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 64/78 (82%)
Query: 89 KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
+AMFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + +
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 149 IRTQVIRMVGESTEAVGA 166
R +V +++G + V A
Sbjct: 74 ARIEVEKIIGRGSGFVAA 91
>gi|378787369|gb|AFC40000.1| Clp protease ATP binding subunit [Porphyra umbilicalis]
Length = 821
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/753 (72%), Positives = 646/753 (85%), Gaps = 6/753 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLL+GL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D S+IR +VI+M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVV
Sbjct: 126 NLAVDVSSIRAEVIQMLGENAEANVSGSNATQARSKTPTLEEFGSNLTQMAIEGGLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD
Sbjct: 186 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+
Sbjct: 246 VGLLVAGTKYRGEFEERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYRKHIEKDPALERRFQPV V EPSV+ETI+IL GLR+RYE HH+
Sbjct: 306 LARGELQCIGATTLEEYRKHIEKDPALERRFQPVVVGEPSVEETIEILFGLRDRYEKHHQ 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +D AL +AA+ + QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR +
Sbjct: 366 LTMSDGALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K K+EA+R Q +E A + R REM++KAQI+A+ K E PVVTE DI
Sbjct: 426 LKTKDEAIRAQKYETAEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIA 481
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+AWTGIPV K++ ES++L+ MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRP
Sbjct: 482 EIVAAWTGIPVTKLTKSESEKLMHMEETLHGRIIGQDEAVVAVSRAIRRARVGLKNPNRP 541
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+
Sbjct: 542 IASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYS 601
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGG LTEAVR++PYTV+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMT
Sbjct: 602 EGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMT 661
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 662 SNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQL 721
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV+EIA++ML EVF R+K +DI+L VTERF+ER+VEEGYNPSYGARPLRRA+MRLLE
Sbjct: 722 TKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLE 781
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++L+ +IK GDS +VDV ++G VTVL G
Sbjct: 782 DSLAEEVLSGKIKAGDSAVVDVTNEGEVTVLLG 814
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++ + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|86605369|ref|YP_474132.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
gi|86553911|gb|ABC98869.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
Length = 824
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/751 (73%), Positives = 648/751 (86%), Gaps = 8/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG GG SS K PTL+E+G+NLT+LA+EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VTAG-GGSSSRTKTPTLDEFGSNLTQLAQEGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GDVPD + K+V++LD
Sbjct: 184 GRTREIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPDILADKRVVSLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMDEIRNAGNIILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQP+ V EPSV ETI+IL GLRERYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPIMVGEPSVSETIEILFGLRERYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +D AL +AA+L+ QYISDRFLPDKAIDLIDEA SRVRL ++QLP AREL++ELR++
Sbjct: 364 LKISDAALEAAAKLADQYISDRFLPDKAIDLIDEAASRVRLINSQLPPAARELDQELRRV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+ AVR QDF++AGELRDREM++K QI A+ K + E P VTE DI
Sbjct: 424 LKEKDAAVRAQDFDRAGELRDREMEIKQQIRAIAAAKKAEESSRQEM----PEVTEEDIA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+VSAWTG+PV K++ ES++LL MEETLH+R+IGQDEAV+AISRAIRRARVGLKNPNRP
Sbjct: 480 QVVSAWTGVPVAKLTESESEKLLHMEETLHQRIIGQDEAVRAISRAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSE AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 540 IASFIFSGPTGVGKTELTKALAAYFFGSESAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTL++MT
Sbjct: 600 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRTVDFKNTLIVMT 659
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ + +++D++YNRI++LV EELKQYFRPEFLNR+DE+IVFRQL
Sbjct: 660 SNIGSKVIEKGGGSLGFEFNTNDEDANYNRIRNLVHEELKQYFRPEFLNRVDEIIVFRQL 719
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVK+IADI+LKEVFDR+K K I L V++RF++ +VEEGYNPSYGARPLRRAI RLLE
Sbjct: 720 TKEEVKQIADILLKEVFDRMKEKKIYLTVSDRFKDLLVEEGYNPSYGARPLRRAIQRLLE 779
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
D +AE++L +KEG V++DVD + VL
Sbjct: 780 DILAEEILTGHVKEGSEVLIDVDEERKPKVL 810
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|317970390|ref|ZP_07971780.1| ATPase [Synechococcus sp. CB0205]
Length = 850
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/759 (72%), Positives = 650/759 (85%), Gaps = 22/759 (2%)
Query: 81 GRAGGFVVKAMFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVL 139
GR GFV A+ E FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVL
Sbjct: 68 GRGSGFV--AVVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVL 125
Query: 140 ENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
ENLG D + +RTQVIRM+GE+ E G G GGG K PTL+E+G+NLT+ A +GKLDPV
Sbjct: 126 ENLGVDLAKVRTQVIRMLGETAEVAGGGGGGGKGSTKTPTLDEFGSNLTQQASDGKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD +E K+V+TL
Sbjct: 186 VGRQHEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRINSGDVPDILEDKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV+V EPSV++TI+IL+GL+ERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVQVGEPSVEDTIEILRGLKERYESHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L DEALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR+
Sbjct: 366 RLTIADEALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPSAAKEVDKQLRE 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQI-SALVDKGKEMSKAETEAGDV-------- 490
I K+K+EAVR QDF KAGELRD+E++L+ QI S L ++ +E AE+ G
Sbjct: 426 IEKQKDEAVREQDFTKAGELRDKEVELREQIRSILQNRNEEKPAAESSEGSADTPVAVAE 485
Query: 491 ---------GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVK 541
GP+VTE DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVK
Sbjct: 486 APAAAVSESGPMVTEEDIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVK 545
Query: 542 AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 601
A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL K+LAAY+FGSEEAMIRLDMSEFM
Sbjct: 546 AVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFM 605
Query: 602 ERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGR 661
ERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGR
Sbjct: 606 ERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGR 665
Query: 662 LTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELK 720
LTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ D ++++YNRI+SLV EELK
Sbjct: 666 LTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGGDAEETNYNRIRSLVNEELK 725
Query: 721 QYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEE 780
QYFRPEFLNRLDE+IVFRQL++ EVKEI++IMLKEVF R++ K I L VTE F+ER+V+E
Sbjct: 726 QYFRPEFLNRLDEIIVFRQLSRDEVKEISEIMLKEVFTRMQEKGITLTVTEAFKERLVDE 785
Query: 781 GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 819
GYNPSYGARPLRRA+MRLLEDS+AE+ L+ I EGD+ +
Sbjct: 786 GYNPSYGARPLRRAVMRLLEDSLAEEFLSGRIGEGDTAL 824
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|90994524|ref|YP_537014.1| Clp protease ATP binding subunit [Pyropia yezoensis]
gi|122194672|sp|Q1XDF4.1|CLPC_PORYE RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|90819088|dbj|BAE92457.1| Clp protease ATP binding subunit [Pyropia yezoensis]
Length = 821
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/753 (72%), Positives = 646/753 (85%), Gaps = 6/753 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLL+GL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D S+IR +VI+M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVV
Sbjct: 126 NLAVDVSSIRAEVIQMLGENAEANVSGSNTTQARSKTPTLEEFGSNLTQMAMEGGLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD
Sbjct: 186 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+
Sbjct: 246 VGLLVAGTKYRGEFEERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYRKHIEKDPALERRFQPV V EPSV+ETI+IL GLR+RYE HH+
Sbjct: 306 LARGELQCIGATTLEEYRKHIEKDPALERRFQPVVVGEPSVEETIEILFGLRDRYEKHHQ 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +D AL +AA+ + QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR +
Sbjct: 366 LTMSDGALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K K+EA+R Q +E A + R REM++KAQI+A+ K E PVVTE DI
Sbjct: 426 LKTKDEAIRAQKYETAEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIA 481
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+AWTGIPV K++ ES++L+ MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRP
Sbjct: 482 EIVAAWTGIPVTKLTKSESEKLMHMEETLHGRIIGQDEAVVAVSRAIRRARVGLKNPNRP 541
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+
Sbjct: 542 IASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYS 601
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGG LTEAVR++PYTV+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMT
Sbjct: 602 EGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMT 661
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 662 SNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQL 721
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV+EIA++ML EVF R+K +DI+L VTERF++R+VEEGYNPSYGARPLRRA+MRLLE
Sbjct: 722 TKDEVREIAELMLNEVFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLE 781
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++L+ +IK GDS +VDV ++G VTVL G
Sbjct: 782 DSLAEEVLSGKIKAGDSAVVDVTNEGEVTVLLG 814
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++ + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|428775828|ref|YP_007167615.1| ATPase [Halothece sp. PCC 7418]
gi|428690107|gb|AFZ43401.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 823
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/752 (73%), Positives = 655/752 (87%), Gaps = 11/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V +G G + K PTL+E+G+NLT+LA + KLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VSSGSSQGRT--KTPTLDEFGSNLTQLATDSKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI++ DVPD +E K+V+TLD
Sbjct: 183 GRQNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISNEDVPDILENKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V++T++IL GLR+RYE HHK
Sbjct: 303 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVEDTVEILFGLRDRYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LR TD AL +AA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+EL++ELRQ+
Sbjct: 363 LRITDAALDAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDEELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD-KGKEMSKAETEAGDVGPVVTEVDI 499
K+K++AVR QDF++AGELRDREM++K++I +L K E S+ + VGPVV +I
Sbjct: 423 LKQKDDAVRSQDFDRAGELRDREMEIKSEIRSLASAKNTETSQDD----QVGPVVDVEEI 478
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV++WTG+PV K++ ES++LL ME TLH+R+IGQ+EAV+A+SRAIRRARVGLKNPNR
Sbjct: 479 AHIVASWTGVPVSKITETESEKLLHMEGTLHERLIGQEEAVRAVSRAIRRARVGLKNPNR 538
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 PIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 598
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 599 NEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLIM 658
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+LD D+ +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQ
Sbjct: 659 TSNIGSKVIEKGGGGLGFELDEDQAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQ 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L + EVKEIA+IML EVF RL ++I+L+VTE F+ER+VEEGY+PSYGARPLRRAIMRLL
Sbjct: 719 LNREEVKEIAEIMLHEVFSRLTEQEIKLEVTEAFKERLVEEGYSPSYGARPLRRAIMRLL 778
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
ED +AE++L+ + EGD+ VDV +G+V V
Sbjct: 779 EDILAEEILSGRLSEGDTATVDV-VEGDVKVF 809
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|78213152|ref|YP_381931.1| ATPase [Synechococcus sp. CC9605]
gi|78197611|gb|ABB35376.1| ATPase [Synechococcus sp. CC9605]
Length = 846
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/764 (71%), Positives = 647/764 (84%), Gaps = 16/764 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTE-AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E + G G GG K PTL+E+G NLT+LA E KLDPV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVSAGGGGGGAKGSTKTPTLDEFGNNLTQLATEAKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TL
Sbjct: 186 VGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+D+TI+IL+GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TD+ALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR
Sbjct: 366 RLKITDDALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRS 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE------------A 487
+ K+K +AVR QDF KAGELR++E++L+ QI +L+ K+ +KA+T A
Sbjct: 426 VQKDKEDAVRDQDFTKAGELREKEVELREQIRSLLQANKDEAKADTTAESGETAFTEAAA 485
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
D P+V E DI IV++WTG+PV+K++ ES +LL MEETLHKR+IGQDEAVKA+S+AI
Sbjct: 486 SDSSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAI 545
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVS
Sbjct: 546 RRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVS 605
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKG
Sbjct: 606 KLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKG 665
Query: 668 RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPE 726
RTVDFKNTL+IMTSN+GS VIEKGG +GF+ + ++S Y RI+SLV EELKQYFRPE
Sbjct: 666 RTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQYFRPE 725
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVFRQL + EVKEIA+IMLKEVF R+ K I L V++ F+ER+VEEGYNP+Y
Sbjct: 726 FLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMGDKGITLTVSDAFKERLVEEGYNPAY 785
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA+MRLLEDS+AE++L+ IK+G+ VDVD + V V
Sbjct: 786 GARPLRRAVMRLLEDSLAEEVLSGRIKDGEHAEVDVDENKKVVV 829
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|148239871|ref|YP_001225258.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. WH 7803]
gi|147848410|emb|CAK23961.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. WH 7803]
Length = 844
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/786 (71%), Positives = 657/786 (83%), Gaps = 30/786 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 55 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 112
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKM--PTLEEYGTNLTKLAEEGKLDP 198
NLG D S +RTQVIRM+GE+ E VGAG G S PTL+E+G NLT+LA E KLDP
Sbjct: 113 NLGVDLSKVRTQVIRMLGETAE-VGAGGSGSGSKGSTKTPTLDEFGNNLTQLAGEAKLDP 171
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
VVGRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+T
Sbjct: 172 VVGRQSEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLT 231
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILK
Sbjct: 232 LDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILK 291
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+D+TI+ILKGLRERYE H
Sbjct: 292 PALARGELQCIGATTLDEYRKHIERDAALERRFQPVTVGEPSIDDTIEILKGLRERYEQH 351
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
H+LR TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR
Sbjct: 352 HRLRITDEALEAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPEAKEVDKELR 411
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS-----KAETEAGDVG-- 491
+ KEK +AVR QDF +AGELRD+E++L+ +I +L+ +E S ++E +A DV
Sbjct: 412 AVQKEKEDAVREQDFSRAGELRDKEVELRDKIRSLLQSSREDSPSDNQQSEDQATDVDVA 471
Query: 492 ----------------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 535
PVV E DI IV++WTG+PV+K++ ES +LL MEETLHKR+IG
Sbjct: 472 STESEGATELAVTGTTPVVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIG 531
Query: 536 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 595
QDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRL
Sbjct: 532 QDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRL 591
Query: 596 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 655
DMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ
Sbjct: 592 DMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQ 651
Query: 656 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSL 714
+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRI+SL
Sbjct: 652 LLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSL 711
Query: 715 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 774
V EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IML+EVF R+ K I L V++ F+
Sbjct: 712 VNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKEIAEIMLREVFGRIGEKGITLTVSDAFK 771
Query: 775 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGS 834
ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L+ IK+GD VDV+ DG V V + +
Sbjct: 772 ERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDEAEVDVE-DGKVVVKHLN 830
Query: 835 SGAPES 840
A E+
Sbjct: 831 RTATET 836
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 47/58 (81%)
Query: 104 MLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
MLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R +V +++G +
Sbjct: 1 MLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGS 58
>gi|86608097|ref|YP_476859.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556639|gb|ABD01596.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 824
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/751 (73%), Positives = 647/751 (86%), Gaps = 8/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D S +RTQVIRM+GE+ E V AG GG SS K PTL+E+G+NLT+LA+EGKLDPVV
Sbjct: 126 NLGVDLSKVRTQVIRMLGETAE-VTAG-GGSSSRTKTPTLDEFGSNLTQLAQEGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GDVPD + K+VI+LD
Sbjct: 184 GRTREIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPDILADKRVISLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMDEIRNAGNIILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQP+ V EP+V ETI+IL GLRERYE HHK
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPIMVGEPTVSETIEILFGLRERYEQHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +D AL +AA+L+ QYISDRFLPDKAIDLIDEA SRVRL ++QLP AREL++ELR++
Sbjct: 364 LKISDAALDAAAKLADQYISDRFLPDKAIDLIDEAASRVRLINSQLPPAARELDQELRRV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK+ AVR Q+F+KAGELRDREM++K QI A+ K + +E P VTE D+
Sbjct: 424 LKEKDAAVRAQNFDKAGELRDREMEIKQQIRAIAAAKKAEESSRSEM----PEVTEEDVA 479
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+VSAWTG+PV K++ ES +LL MEETLH+R+IGQDEAV+AISRAIRRARVGLKNPNRP
Sbjct: 480 QVVSAWTGVPVAKLTESESVKLLNMEETLHQRIIGQDEAVRAISRAIRRARVGLKNPNRP 539
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSE AMIRLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 540 IASFIFSGPTGVGKTELTKALAAYFFGSESAMIRLDMSEYMERHTVSKLIGSPPGYVGYN 599
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDFKNTL++MT
Sbjct: 600 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRTVDFKNTLIVMT 659
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ + +++D++YNRI++LV EELKQYFRPEFLNR+DE+IVFRQL
Sbjct: 660 SNIGSKVIEKGGGSLGFEFNTNDEDANYNRIRNLVNEELKQYFRPEFLNRVDEIIVFRQL 719
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVK+IADI+LKEVFDR+ K I L V++RF++ VVEEGYNPSYGARPLRRAI RLLE
Sbjct: 720 TKDEVKQIADILLKEVFDRMTEKKIRLTVSDRFKDLVVEEGYNPSYGARPLRRAIQRLLE 779
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
D +AE++L ++EG V++DVD + VL
Sbjct: 780 DILAEEILTGHVREGSEVLIDVDEERKPKVL 810
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|11465798|ref|NP_053942.1| Clp protease ATP binding subunit [Porphyra purpurea]
gi|1705925|sp|P51332.1|CLPC_PORPU RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|1276798|gb|AAC08218.1| Clp protease ATP binding subunit (chloroplast) [Porphyra purpurea]
Length = 821
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/753 (72%), Positives = 645/753 (85%), Gaps = 6/753 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLL+GL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D S+IR +VI+M+GE+ EA +G + +K PTLEE+G+NLT++A EG LDPVV
Sbjct: 126 NLAVDVSSIRAEVIQMLGENAEANVSGSNATQARSKTPTLEEFGSNLTQMAIEGGLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVP +E K VITLD
Sbjct: 186 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPSILEDKLVITLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLK++M+EIK +D +IL IDEVHTLIGAGAAEGAIDAAN+LKP+
Sbjct: 246 VGLLVAGTKYRGEFEERLKRIMDEIKSADNVILVIDEVHTLIGAGAAEGAIDAANLLKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYRKHIEKDPALERRF PV V EPSV+ETI+IL GLR+RYE HH+
Sbjct: 306 LARGELQCIGATTLEEYRKHIEKDPALERRFHPVVVGEPSVEETIEILFGLRDRYEKHHQ 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +D AL +AA+ + QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR +
Sbjct: 366 LTMSDGALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K K+EA+R Q +E A + R REM++KAQI+A+ K E PVVTE DI
Sbjct: 426 LKTKDEAIRAQKYETAEQYRAREMEIKAQIAAIAQSKKNEPDLNLE----DPVVTEDDIA 481
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+AWTGIPV K++ ES++L++MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRP
Sbjct: 482 EIVAAWTGIPVTKLTKSESEKLMQMEETLHGRIIGQDEAVIAVSRAIRRARVGLKNPNRP 541
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGSE +MIRLDMSE+MERHTVSKLIGSPPGYVGY+
Sbjct: 542 IASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYS 601
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGG LTEAVR++PYTV+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMT
Sbjct: 602 EGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMT 661
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 662 SNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQL 721
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV+EIA++ML EVF R+K +DI+L VTERF+ER+VEEGYNPSYGARPLRRA+MRLLE
Sbjct: 722 TKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLE 781
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++L+ +IK GDS +VDV ++G V VL G
Sbjct: 782 DSLAEEVLSGKIKAGDSPVVDVTNEGEVKVLLG 814
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++ + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|159903639|ref|YP_001550983.1| ClpC [Prochlorococcus marinus str. MIT 9211]
gi|159888815|gb|ABX09029.1| ClpC [Prochlorococcus marinus str. MIT 9211]
Length = 859
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/784 (70%), Positives = 659/784 (84%), Gaps = 29/784 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E G GGG G+ K TL+E+GTNLTKLA E KLDPV
Sbjct: 126 NLGVDLTKVRTQVIRMLGETAEVTSGGGGGGGKGSLKTATLDEFGTNLTKLASESKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TL
Sbjct: 186 VGRYEEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EPS+++TI+ILKGLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVMIGEPSIEDTIEILKGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TD+AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++K+LR+
Sbjct: 366 RLKITDQALEAAANLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKQLRK 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL---------VDKGKEMSKAETEAGDV 490
+ KEK EAVR Q+F +AGELR++E++LK QI+++ +++G++ S+ + A D
Sbjct: 426 VQKEKEEAVRDQNFTEAGELREKEVNLKNQIASILNTTKDKTTLNEGEKDSQPDASAEDK 485
Query: 491 ----------------GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 534
P+V E DI HIV++WTG+PV+K++ ES +LL ME+TLH+R+I
Sbjct: 486 KDNKENISQEIKGVNRSPIVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLI 545
Query: 535 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 594
GQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIR
Sbjct: 546 GQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIR 605
Query: 595 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 654
LDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEK+HPDVFN++L
Sbjct: 606 LDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKSHPDVFNLLL 665
Query: 655 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKS 713
Q+LE+GRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +DS YNRIKS
Sbjct: 666 QLLEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESIEDSQYNRIKS 725
Query: 714 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 773
LV EELKQYFRPEFLNRLDE+IVFRQL++ EVK+IA+IML EVF R+K K I L VTE F
Sbjct: 726 LVNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKDIAEIMLNEVFLRIKDKGITLSVTEAF 785
Query: 774 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
+ER+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ IK+GD VD+D + V V +
Sbjct: 786 KERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDENKKVVVKHI 845
Query: 834 SSGA 837
+ GA
Sbjct: 846 NKGA 849
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSVGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|124026198|ref|YP_001015314.1| ClpC [Prochlorococcus marinus str. NATL1A]
gi|123961266|gb|ABM76049.1| ClpC [Prochlorococcus marinus str. NATL1A]
Length = 855
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/787 (69%), Positives = 651/787 (82%), Gaps = 28/787 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQV+RM+GE+ E V G G K TL+E+GTNLT+LA E KLDPVV
Sbjct: 126 NLGVDLTKVRTQVVRMLGETAE-VTTGSGSSKGSAKTATLDEFGTNLTQLASESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD
Sbjct: 185 GRHSEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGNIPDILEEKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EPS+ +TI+ILKGLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMIGEPSIKDTIEILKGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR+I
Sbjct: 365 LKITDEALDAAANLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKELRKI 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD--KGKEMSKAETEAGDV-------- 490
K K EAVR Q+F +AGELR++E++L+ +I L+ + K S ++ +V
Sbjct: 425 QKSKEEAVRDQNFTQAGELREKEVELRDKIRNLLQNIRQKPSSNENPDSNNVPQENNQAS 484
Query: 491 -------------GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 537
PVV E DI HIV++WTG+PV+K++ ES +LL ME+TLH+R+IGQD
Sbjct: 485 DQVINQSDDLKVSQPVVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQD 544
Query: 538 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 597
EAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDM
Sbjct: 545 EAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDM 604
Query: 598 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 657
SEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+L
Sbjct: 605 SEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLL 664
Query: 658 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVT 716
E+GRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +D+ YNRIKSLV
Sbjct: 665 EEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENLEDTQYNRIKSLVN 724
Query: 717 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 776
EELKQYFRPEFLNRLDE+IVFRQL++ EVK+IA+IMLKEVF R+K K I L V+E F+ER
Sbjct: 725 EELKQYFRPEFLNRLDEIIVFRQLSRDEVKDIAEIMLKEVFSRIKDKGISLTVSEDFKER 784
Query: 777 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN-GSS 835
+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ IK+GD VD+D V V + G
Sbjct: 785 LVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDESKKVIVKHLGKD 844
Query: 836 GAPESLA 842
G+ LA
Sbjct: 845 GSKPELA 851
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|260435541|ref|ZP_05789511.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
gi|260413415|gb|EEX06711.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
Length = 846
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/764 (71%), Positives = 645/764 (84%), Gaps = 16/764 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS-GNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E G GGG+ K PTL+E+G NLT+LA E KLDPV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVTAGGGGGGAKGSTKTPTLDEFGNNLTQLATEAKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TL
Sbjct: 186 VGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+D+TI+IL+GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TD+ALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR
Sbjct: 366 RLKITDDALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRS 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD---------- 489
+ K+K +AVR QDF KAGELR++E++L+ QI +L+ K+ KA+ +G
Sbjct: 426 VQKQKEDAVRDQDFTKAGELREKEVELREQIRSLLQANKDEVKADATSGSGETVSAESSA 485
Query: 490 --VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
P+V E DI IV++WTG+PV+K++ ES +LL MEETLHKR+IGQDEAVKA+S+AI
Sbjct: 486 SDSSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAI 545
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVS
Sbjct: 546 RRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVS 605
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKG
Sbjct: 606 KLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKG 665
Query: 668 RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPE 726
RTVDFKNTL+IMTSN+GS VIEKGG +GF+ + ++S Y RI+SLV EELKQYFRPE
Sbjct: 666 RTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQYFRPE 725
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVFRQL + EVKEIA+IMLKEVF R+ K I L V++ F+ER+VEEGYNP+Y
Sbjct: 726 FLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNPAY 785
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA+MRLLEDS+AE++L+ IK+GD VDVD + V V
Sbjct: 786 GARPLRRAVMRLLEDSLAEEVLSGRIKDGDHAEVDVDENKKVVV 829
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|78184962|ref|YP_377397.1| ATPase [Synechococcus sp. CC9902]
gi|78169256|gb|ABB26353.1| ATPase [Synechococcus sp. CC9902]
Length = 843
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/761 (72%), Positives = 646/761 (84%), Gaps = 13/761 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS-GNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E G GGG+ K PTL+E+GTNLT++A E KLDPV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVTAGGGGGGAKGSTKTPTLDEFGTNLTQMATESKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TL
Sbjct: 186 VGRYNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+D+TI+IL+GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TDEALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR
Sbjct: 366 RLKITDEALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPEAKEVDKELRT 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG---------DV 490
+ K+K +AVR QDF KAGELR++E++L+ +I AL+ + S+ + D
Sbjct: 426 VQKDKEDAVRDQDFAKAGELREKEVELREKIRALMQTSRSSSEEGSSDESAVSTPAVVDT 485
Query: 491 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
P+V+E DI HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRA
Sbjct: 486 TPMVSEEDIAHIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRA 545
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
RVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 546 RVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLI 605
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
GSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTV
Sbjct: 606 GSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTV 665
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNTL+IMTSN+GS VIEKGG +GF+ + +DS Y RI+SLV EELKQYFRPEFLN
Sbjct: 666 DFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEDSQYTRIRSLVNEELKQYFRPEFLN 725
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
RLDE+IVFRQL + EVKEIA+IMLKEVF R+ K I L V++ F+ER+VEEGYNP+YGAR
Sbjct: 726 RLDEIIVFRQLNREEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNPAYGAR 785
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
PLRRA+MRLLEDS+AE++L IK+GD VDVD + V V
Sbjct: 786 PLRRAVMRLLEDSLAEEVLTGRIKDGDHAEVDVDENKKVVV 826
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|51209900|ref|YP_063564.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
gi|50657654|gb|AAT79639.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
Length = 823
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/753 (72%), Positives = 651/753 (86%), Gaps = 6/753 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLL+GL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL + ++IRT+VI+M+G++TEA G + +K PTLEE+G+NLT+LA EG LDPVV
Sbjct: 126 NLAVNVASIRTEVIQMLGDTTEANTNGNNNTQTRSKTPTLEEFGSNLTELAIEGILDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ D+P +E K V+TLD
Sbjct: 186 GRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPSILEDKLVVTLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLK++M+EIK ++ I+L IDEVHTLIGAGAAEGAIDAAN+LKP+
Sbjct: 246 VGLLVAGTKYRGEFEERLKRIMDEIKSANNIVLVIDEVHTLIGAGAAEGAIDAANLLKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYRKHIEKD ALERRFQPV V EPSV+ETI+IL GLR+RYE HH+
Sbjct: 306 LARGELQCIGATTLEEYRKHIEKDAALERRFQPVLVGEPSVEETIEILFGLRDRYEKHHQ 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA+ + QYISDRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR +
Sbjct: 366 LKMSDEALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRSV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K K+EA+R Q +EKA + R REM++KAQI+A+ K + E PVVTE DI
Sbjct: 426 LKTKDEAIRAQKYEKAEQYRTREMEIKAQIAAIAQSKKNEPNVQIE----DPVVTEDDIA 481
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+ WTGIPV K++ ES++L+ MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRP
Sbjct: 482 EIVAFWTGIPVTKLTKSESEKLMHMEETLHNRIIGQDEAVVAVSRAIRRARVGLKNPNRP 541
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGS+EAM+RLDMSE+MERHTVSKLIGSPPGYVGY+
Sbjct: 542 IASFIFSGPTGVGKTELTKALASYFFGSQEAMVRLDMSEYMERHTVSKLIGSPPGYVGYS 601
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGG LTEAVR+RPYTV+LFDEIEKAHPD+FN++LQILEDGRLTD+KGRT+DFKNTLLIMT
Sbjct: 602 EGGYLTEAVRKRPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDAKGRTIDFKNTLLIMT 661
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L + +S YNRI+SLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 662 SNIGSKVIEKGGGSLGFELGESQTESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQL 721
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV+EIA+IML+EVF+R+K ++IEL+VTERF+ R+V+EGYNPSYGARPLRRA+MRLLE
Sbjct: 722 TKDEVREIAEIMLQEVFNRIKQQEIELEVTERFKNRLVDEGYNPSYGARPLRRAVMRLLE 781
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS+AE++L+ +IK GDS +VDV +G VTVL G
Sbjct: 782 DSLAEEVLSGKIKAGDSAVVDVTDEGKVTVLLG 814
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++ + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAQVLKSMNVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|72382499|ref|YP_291854.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str.
NATL2A]
gi|72002349|gb|AAZ58151.1| ATPase [Prochlorococcus marinus str. NATL2A]
Length = 855
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/787 (69%), Positives = 651/787 (82%), Gaps = 28/787 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQV+RM+GE+ E V G G K TL+E+GTNLT+LA E KLDPVV
Sbjct: 126 NLGVDLTKVRTQVVRMLGETAE-VTTGSGSSKGSAKTATLDEFGTNLTQLASESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD
Sbjct: 185 GRHSEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGNIPDILEEKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EPS+ +TI+ILKGLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMIGEPSIKDTIEILKGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR+I
Sbjct: 365 LKITDEALDAAANLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKELRKI 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE---------------- 484
K K EAVR Q+F +AGELR++E++L+ +I L+ ++
Sbjct: 425 QKSKEEAVRDQNFTQAGELREKEVELRDKIRNLLQNIRQKPSTNENPNSNNVPQENNESS 484
Query: 485 ----TEAGDVG---PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQD 537
T++ D+ PVV E DI HIV++WTG+PV+K++ ES +LL ME+TLH+R+IGQD
Sbjct: 485 DQLITQSDDLKVSQPVVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQD 544
Query: 538 EAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDM 597
EAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDM
Sbjct: 545 EAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDM 604
Query: 598 SEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIL 657
SEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+L
Sbjct: 605 SEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLL 664
Query: 658 EDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVT 716
E+GRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +D+ YNRIKSLV
Sbjct: 665 EEGRLTDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGENLEDTQYNRIKSLVN 724
Query: 717 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRER 776
EELKQYFRPEFLNRLDE+IVFRQL++ EVK+IA+IMLKEVF R+K K I L V+E F+ER
Sbjct: 725 EELKQYFRPEFLNRLDEIIVFRQLSRDEVKDIAEIMLKEVFLRIKDKGISLTVSEDFKER 784
Query: 777 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN-GSS 835
+VEEGYNPSYGARPLRRA+MRLLEDS+AE++L+ IK+GD VD+D V V + G
Sbjct: 785 LVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDESKKVIVKHLGKD 844
Query: 836 GAPESLA 842
G+ LA
Sbjct: 845 GSKPELA 851
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|116072469|ref|ZP_01469736.1| ATPase [Synechococcus sp. BL107]
gi|116064991|gb|EAU70750.1| ATPase [Synechococcus sp. BL107]
Length = 843
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/761 (72%), Positives = 645/761 (84%), Gaps = 13/761 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E G G G+ G K PTL+E+G NLT+LA E KLDPV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVTAGGGGSGAKGSTKTPTLDEFGNNLTQLATESKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TL
Sbjct: 186 VGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+D+TI+IL+GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TDEALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR
Sbjct: 366 RLKITDEALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPEAKEVDKELRT 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG---------DV 490
+ K+K +AVR QDF KAGELR++E++L+ +I AL+ + S+ + D
Sbjct: 426 VQKDKEDAVRDQDFAKAGELREKEVELREKIRALMQTSRSSSEEASSDESAVTTPAVVDT 485
Query: 491 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
P+V+E DI HIV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AIRRA
Sbjct: 486 TPMVSEEDIAHIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAIRRA 545
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
RVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 546 RVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLI 605
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
GSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKGRTV
Sbjct: 606 GSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTV 665
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNTL+IMTSN+GS VIEKGG +GF+ + +DS Y RI+SLV EELKQYFRPEFLN
Sbjct: 666 DFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEDSQYTRIRSLVNEELKQYFRPEFLN 725
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
RLDE+IVFRQL + EVKEIA+IMLKEVF R+ K I L V++ F+ER+VEEGYNP+YGAR
Sbjct: 726 RLDEIIVFRQLNREEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNPAYGAR 785
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
PLRRA+MRLLEDS+AE++L IK+GD VDVD + V V
Sbjct: 786 PLRRAVMRLLEDSLAEEVLTGRIKDGDHAEVDVDENKKVVV 826
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 IEVEKIIGRGS 71
>gi|87303420|ref|ZP_01086208.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
gi|87282068|gb|EAQ74030.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
Length = 856
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/788 (70%), Positives = 658/788 (83%), Gaps = 29/788 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E V AG GG K PTL+E+G+NLT+LA EGKLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAE-VTAGGGGSKGSTKTPTLDEFGSNLTQLAAEGKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RVVQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI G+VPD +E K+V+TLD
Sbjct: 185 GRHNEIDRVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIIIGEVPDILEDKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV +TI+IL+GLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVVDTIEILRGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA L +YISDRFLPDKAIDL+DEAGSRVRL +++LP A+EL+K+LR I
Sbjct: 365 LKISDEALVAAATLGDRYISDRFLPDKAIDLVDEAGSRVRLMNSKLPPAAKELDKQLRAI 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD-------------KGKEMSKAETEA 487
K+K ++VR QDF KAGELRD+E++L+ QI +++ +G + AE +A
Sbjct: 425 QKQKEDSVRQQDFGKAGELRDKEVELRDQIRSILQARRDEEPVASTAVEGSAEATAEAKA 484
Query: 488 ------------GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 535
G+ PVVTE DI IV++WTG+PV+K++ ES +LL MEETLH+R+IG
Sbjct: 485 STAADNALASSSGERHPVVTEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIG 544
Query: 536 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 595
QDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRL
Sbjct: 545 QDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRL 604
Query: 596 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 655
DMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ
Sbjct: 605 DMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQ 664
Query: 656 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSL 714
+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ +++ YNRI+SL
Sbjct: 665 LLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGAAVEETQYNRIRSL 724
Query: 715 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 774
V EELKQYFRPEFLNRLDE+IVFRQL++ EVKEIA+IML+EVF R++ K I L VTE F+
Sbjct: 725 VNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLREVFGRMQEKGIGLSVTEAFK 784
Query: 775 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGS 834
ER+VEEGYNPSYGARPLRRA+MRLLEDS+AE+ L+ +K+GDS +VDV+ + V + + +
Sbjct: 785 ERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEFLSGRLKDGDSALVDVNDEKQVVIRHQT 844
Query: 835 SGAPESLA 842
A LA
Sbjct: 845 VVAEPELA 852
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|33863332|ref|NP_894892.1| protein ClpC [Prochlorococcus marinus str. MIT 9313]
gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. MIT 9313]
Length = 859
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/789 (70%), Positives = 658/789 (83%), Gaps = 33/789 (4%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E V AG GGG K TL+E+G+NLT+LA E KLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAE-VTAGGGGGKGSTKTATLDEFGSNLTQLANESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD
Sbjct: 185 GRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+ ETI+IL+GLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIAETIEILQGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR++
Sbjct: 365 LKITDEALDAAANLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRKV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSK----AETE----AGD--- 489
KEK +AVR QDF KAGELR++E++L+ +I L+ ++ S+ AE E + D
Sbjct: 425 QKEKEDAVRDQDFAKAGELREKEVELREKIRTLLQSSRQGSEESPPAEAENAVRSSDETP 484
Query: 490 ----------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 533
P+VTE DI +IV+AWTG+PV+K++ ES +LL MEETLH+R+
Sbjct: 485 TPQPEKNTTAALIPHLTTPLVTEEDIANIVAAWTGVPVQKLTESESVKLLNMEETLHQRL 544
Query: 534 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 593
IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMI
Sbjct: 545 IGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMI 604
Query: 594 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 653
RLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++
Sbjct: 605 RLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLL 664
Query: 654 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIK 712
LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +DS YNRIK
Sbjct: 665 LQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEDSQYNRIK 724
Query: 713 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 772
SLV EELKQYFRPEFLNRLDE+IVFRQL++ EVKEIA+IML+EVF R++ K I L V++
Sbjct: 725 SLVNEELKQYFRPEFLNRLDEIIVFRQLSRNEVKEIAEIMLQEVFSRMQDKGITLTVSDA 784
Query: 773 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV-- 830
F+ER+VEEGYNPSYGARPLRRA+MRL+EDS+AE++L IK+GD+ +DVD + + V
Sbjct: 785 FKERLVEEGYNPSYGARPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVVRH 844
Query: 831 LNGSSGAPE 839
++ ++ PE
Sbjct: 845 VSKTTATPE 853
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++ + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMSVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|11467609|ref|NP_050661.1| Clp protease ATP binding subunit [Guillardia theta]
gi|5921798|sp|O78410.1|CLPC_GUITH RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|3602934|gb|AAC35595.1| Clp protease ATP binding subunit (chloroplast) [Guillardia theta]
Length = 819
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/736 (73%), Positives = 632/736 (85%), Gaps = 13/736 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D + +RTQVIR++G++ E G + K PTLEE+G+NLT+ A EGKLDPV+
Sbjct: 126 NLALDLTKVRTQVIRLLGDTAEVSATN---GQTKGKTPTLEEFGSNLTQKAAEGKLDPVI 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD +E K+V+TLD
Sbjct: 183 GRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDILEDKRVVTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+++EI+ ++ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGE+QCIGATTL+EYRKHIEKD ALERRFQPV V EPSV+ETI+IL GLR+RYE HHK
Sbjct: 303 LARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEAL +AA+ + QYI+DRFLPDKAIDLIDEAGSRVRL ++QLP AREL+KELR+I
Sbjct: 363 LVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPAARELDKELREI 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD--KGKEMSKAETEAGDVGPVVTEVD 498
K+K+EAVR QDFE AG+LRDREM++KAQI+A+ KG E + E VVTE D
Sbjct: 423 LKQKDEAVRSQDFETAGQLRDREMEIKAQIAAIAHSKKGDEENTKEV------SVVTEED 476
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I IV+AWTGIPV K++ ES++LL+MEETLH R+IGQDEAV A+S+AIRRARVGLKNPN
Sbjct: 477 IAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVGLKNPN 536
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 537 RPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVG 596
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTE+VRRRPYTVVLFDEIEK HPDVFN++LQILEDGRLTDSKGRTVDFKNTLLI
Sbjct: 597 YNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLI 656
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
+TSNVGS VIEKGG +GFDL D+ +S Y RIK+LV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 657 LTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFR 716
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK EV EIA+IMLKEVF R+ K I+L+VT RF+ ++ EGYNP YGARPLRRA+MRL
Sbjct: 717 QLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRL 776
Query: 799 LEDSMAEKMLAREIKE 814
LED+++E+ LA +IKE
Sbjct: 777 LEDTLSEEFLAEKIKE 792
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|124022698|ref|YP_001017005.1| protein ClpC [Prochlorococcus marinus str. MIT 9303]
gi|123962984|gb|ABM77740.1| ClpC [Prochlorococcus marinus str. MIT 9303]
Length = 859
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/789 (70%), Positives = 658/789 (83%), Gaps = 33/789 (4%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E V AG GGG K TL+E+G+NLT+LA E KLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAE-VTAGGGGGKGSTKTATLDEFGSNLTQLANESKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD
Sbjct: 185 GRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 245 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+ ETI+IL+GLRERYE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIAETIEILQGLRERYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR++
Sbjct: 365 LKITDEALDAAANLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRKV 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSK----AETE----AGD--- 489
KEK +AVR QDF KAGELR++E++L+ +I L+ ++ S+ AE E + D
Sbjct: 425 QKEKEDAVRDQDFAKAGELREKEVELREKIRTLLQSSRQDSEESPPAEAENAVRSSDETP 484
Query: 490 ----------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 533
P+VTE DI +IV+AWTG+PV+K++ ES +LL MEETLH+R+
Sbjct: 485 TPQPEKDTTAPSIPPLTTPLVTEEDIANIVAAWTGVPVQKLTESESVKLLNMEETLHQRL 544
Query: 534 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 593
IGQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMI
Sbjct: 545 IGQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMI 604
Query: 594 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 653
RLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++
Sbjct: 605 RLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLL 664
Query: 654 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIK 712
LQ+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + ++S YNRIK
Sbjct: 665 LQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEESQYNRIK 724
Query: 713 SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTER 772
SLV EELKQYFRPEFLNRLDE+IVFRQL++ EVKEIA+IMLKEVF R++ K I L V++
Sbjct: 725 SLVNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFSRMQDKGITLTVSDA 784
Query: 773 FRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV-- 830
F+ER+VEEGYNPSYGARPLRRA+MRL+EDS+AE++L IK+GD+ +DVD + + V
Sbjct: 785 FKERLVEEGYNPSYGARPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVVRH 844
Query: 831 LNGSSGAPE 839
++ ++ PE
Sbjct: 845 VSKTTATPE 853
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 58/68 (85%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++ + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMSVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|71842249|ref|YP_277337.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|52547750|gb|AAU81910.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|60101492|gb|AAX13836.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|336286162|gb|AEI29498.1| Clp protease ATP binding subunit [Emiliania huxleyi]
Length = 817
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/753 (72%), Positives = 649/753 (86%), Gaps = 9/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +++ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRILELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D S +R+Q+IR +GEST+ V AG ++ +K PTLEE+GTNLT+ A EG+LDPVV
Sbjct: 126 NLEVDLSKVRSQIIRSLGESTD-VAAG-NSSTTRSKTPTLEEFGTNLTQKATEGRLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTA+AEGLAQRIA+ DVPDT+E K+V+ LD
Sbjct: 184 GRSKEIERVIQILGRRTKNNPVLIGEPGVGKTAVAEGLAQRIANRDVPDTLEDKRVVALD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLL+AGTKYRGEFEERLKK+M+E++ ++ IIL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLIAGTKYRGEFEERLKKIMDEVRTANNIILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
L+RGELQCIGATT++EYRKHIEKD ALERRFQPV V EP+V+ETI+IL GLR+RYE HHK
Sbjct: 304 LSRGELQCIGATTIEEYRKHIEKDAALERRFQPVMVGEPTVEETIEILYGLRDRYERHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEAL +AA+ + QYI+DRFLPDKAIDLIDEAGSRVRL ++QLP A+ L++ELR +
Sbjct: 364 LVISDEALAAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLLNSQLPPAAKLLDQELRDV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K K+EAVR QDFEKAG+LR+REM+++AQI+A++ K+ S + P VTE DI
Sbjct: 424 LKSKDEAVRNQDFEKAGQLREREMEVRAQINAVIQVSKDPSSSVPT-----PTVTEEDIA 478
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV+AWT IPV K++ ES++LL+MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRP
Sbjct: 479 QIVAAWTSIPVNKLTKSESEKLLQMEETLHSRIIGQDEAVVAVSRAIRRARVGLKNPNRP 538
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 539 IASFLFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYN 598
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDE+EKAHPDVFN+MLQI EDGRLTDSKGR +DFKNTLLIMT
Sbjct: 599 EGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLMLQIFEDGRLTDSKGRVIDFKNTLLIMT 658
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L D+ +S+YNRIKSLV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 659 SNIGSKVIEKGGGGLGFELGEDQDNSAYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQL 718
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV EIA+IMLKEVFDR+ K IEL VT+RF+ R+++EGYNP+YGARPLRRA+MRLLE
Sbjct: 719 TKSEVGEIAEIMLKEVFDRISQKGIELAVTDRFKARLIDEGYNPAYGARPLRRAVMRLLE 778
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
DS++E++L+ ++ GD+ +VDVD +G V VL
Sbjct: 779 DSLSEEVLSERLQSGDAAVVDVDENGKVQVLTA 811
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+ ++L+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIGPKILKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|87124752|ref|ZP_01080600.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
gi|86167631|gb|EAQ68890.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
Length = 860
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/788 (70%), Positives = 656/788 (83%), Gaps = 31/788 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKM--PTLEEYGTNLTKLAEEGKLDP 198
NLG D + +RTQVIRM+GE+ E VGAG GGG S PTL+E+G+NLT+LA E KLDP
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAE-VGAGGGGGGSKGSTKTPTLDEFGSNLTQLASEAKLDP 184
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
VVGRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+T
Sbjct: 185 VVGRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLT 244
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILK
Sbjct: 245 LDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILK 304
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP++ +TI+IL+GLRERYE H
Sbjct: 305 PALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTITDTIEILRGLRERYEQH 364
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
H+L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR
Sbjct: 365 HRLKITDEALEAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELR 424
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA----GDVG--- 491
Q+ KEK AVR QDF +AGELRD+E++L+ QI L+ + S A ++ D G
Sbjct: 425 QVQKEKENAVREQDFTRAGELRDKEVELREQIRTLLQSNRSDSPASDDSPASNDDSGFTP 484
Query: 492 -----------------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 534
PVV E DI IV++WTG+PV+K++ ES +LL MEETLH+R+I
Sbjct: 485 AATDATTSQAVESELTTPVVGEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLI 544
Query: 535 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 594
GQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIR
Sbjct: 545 GQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIR 604
Query: 595 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 654
LDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++L
Sbjct: 605 LDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLL 664
Query: 655 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKS 713
Q+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRI+S
Sbjct: 665 QLLEDGRLTDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRS 724
Query: 714 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 773
LV EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IML+EVF R+ K I L V++ F
Sbjct: 725 LVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKEIAEIMLREVFSRIGEKGITLTVSDAF 784
Query: 774 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L+ IK+GD+V VDVD + V V +G
Sbjct: 785 KERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDAVEVDVDENKQVVVRHG 844
Query: 834 S-SGAPES 840
+ S AP +
Sbjct: 845 TNSPAPAT 852
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|11465497|ref|NP_045112.1| Clp protease ATP binding subunit [Cyanidium caldarium]
gi|14194537|sp|Q9TM05.1|CLPC_CYACA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|6466400|gb|AAF12982.1|AF022186_105 unknown [Cyanidium caldarium]
Length = 854
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/755 (70%), Positives = 647/755 (85%), Gaps = 7/755 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A K++ LA EE+R L HNY+G+EHLLLGL++EGEGVAARVLE
Sbjct: 99 GRGSGFV--AIEIPFTPRAKKILELAIEESRILTHNYVGTEHLLLGLIKEGEGVAARVLE 156
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D +R+ +IRM+GE++E VG S +K+PTLEE+GTNLT++A EGKLDPVV
Sbjct: 157 NLGVDLPKLRSNIIRMIGETSEV---SVGATSGRSKVPTLEEFGTNLTQMAVEGKLDPVV 213
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERVVQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + +VPDT+E KKVITLD
Sbjct: 214 GRAKEIERVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINNEVPDTLEDKKVITLD 273
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+ LLVAGTKYRGEFEERLKK+M+EI+ +D +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 274 VSLLVAGTKYRGEFEERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGAIDAANILKPA 333
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYRKHIEKD ALERRFQPV V EP+V+ETI+IL+GLR+RYE HH+
Sbjct: 334 LARGELQCIGATTLEEYRKHIEKDAALERRFQPVMVEEPTVEETIEILRGLRDRYEAHHR 393
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +D A+V+AA+LS QYI+DRFLPDKAIDL+DEA SRVRL + +LP A L++ELR I
Sbjct: 394 LKISDSAIVAAAKLSDQYIADRFLPDKAIDLVDEASSRVRLMNYKLPPSAEYLDEELRHI 453
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K KNE +R DFE+A + R+RE+++K Q++AL+ KE E E P+V E DI
Sbjct: 454 QKIKNELIRSGDFEEASQFREREIEVKVQMAALMKAKKE--AIEEELALNPPIVNEDDIA 511
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+IVS+WTGIPV K++ ES++LL MEETLH R++GQ+EAV A+S+AIRRARVGLKNPNRP
Sbjct: 512 NIVSSWTGIPVSKLTKSESEKLLHMEETLHSRIVGQNEAVIAVSKAIRRARVGLKNPNRP 571
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KA+A+Y+FGSEEAM+RLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 572 IASFIFSGPTGVGKTELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYN 631
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVR+RPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRT+DFKNTLLIMT
Sbjct: 632 EGGQLTEAVRKRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLIMT 691
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEK G +GF+L+ + ++ Y+R+++LV EELKQYFRPEFLNR+DE+IVFRQL
Sbjct: 692 SNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQL 751
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV++IA IML+E+F+R+K + I LQVTERF+ ++EEGYNPSYGARPLRRA++RLLE
Sbjct: 752 TKDEVRDIAHIMLREIFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLE 811
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
DS+AE++L+ +IKEGD+ ++DVD + V +L G+S
Sbjct: 812 DSLAEEVLSGKIKEGDNAMIDVDENKQVKILLGNS 846
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 58/70 (82%)
Query: 89 KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
K MFERFTEKA+KVIMLAQEEARRLGHN++G+E +LLG+L EG G+AA+ L+++G +
Sbjct: 30 KNMFERFTEKAVKVIMLAQEEARRLGHNFVGTEQILLGILGEGTGLAAKALKSMGITLKD 89
Query: 149 IRTQVIRMVG 158
R +V +++G
Sbjct: 90 ARIEVEKIIG 99
>gi|88808913|ref|ZP_01124422.1| ATPase [Synechococcus sp. WH 7805]
gi|88786855|gb|EAR18013.1| ATPase [Synechococcus sp. WH 7805]
Length = 857
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/775 (70%), Positives = 645/775 (83%), Gaps = 28/775 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG--NKMPTLEEYGTNLTKLAEEGKLDP 198
NLG D + +RTQVIRM+GE+ E G G + K PTL+E+G NLT+LA E KLDP
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVGAGGGSGSGAKGSTKTPTLDEFGNNLTQLAGEAKLDP 185
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
VVGR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+T
Sbjct: 186 VVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLT 245
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LD+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILK
Sbjct: 246 LDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILK 305
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+++TI+IL+GLRERYE H
Sbjct: 306 PALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIEDTIEILRGLRERYEQH 365
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
H+LR TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR
Sbjct: 366 HRLRITDEALEAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKELR 425
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--------- 489
+ KEK +AVR QDF +AGELRD+E++L+ +I +L+ ++ AE +A D
Sbjct: 426 SVQKEKEDAVREQDFTRAGELRDKEVELRDKIRSLLQTSRQDIPAEQQASDENSGEPALA 485
Query: 490 -------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 536
PVV E DI IV++WTG+PV+K++ ES +LL MEETLHKR+IGQ
Sbjct: 486 TEGSETSESAVTGTTPVVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQ 545
Query: 537 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 596
DEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLD
Sbjct: 546 DEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLD 605
Query: 597 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 656
MSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+
Sbjct: 606 MSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQL 665
Query: 657 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLV 715
LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRI+SLV
Sbjct: 666 LEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSLV 725
Query: 716 TEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRE 775
EELKQYFRPEFLNRLDE+IVFRQL + EVKEIA+IML+EVF R+ K I L V++ F+E
Sbjct: 726 NEELKQYFRPEFLNRLDEIIVFRQLNRDEVKEIAEIMLREVFGRIGEKGITLTVSDAFKE 785
Query: 776 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
R+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L IK+GD VDV+ DG V V
Sbjct: 786 RLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLTGRIKDGDEAEVDVE-DGKVVV 839
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|33865472|ref|NP_897031.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
Length = 846
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/750 (72%), Positives = 643/750 (85%), Gaps = 16/750 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E G G GGG+ G+ K PTL+E+G+NLT++A E KLDPV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVSGGGGGGGAKGSTKTPTLDEFGSNLTQMANEAKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TL
Sbjct: 186 VGRHNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGEIPDILEDKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+D+TI+IL+GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TD+ALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP EA+E++KELR
Sbjct: 366 RLKITDDALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPEAKEVDKELRG 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA------------ 487
+ K+K +AVR QDF KAGELR++E++L+ QI +L+ + + A EA
Sbjct: 426 VQKQKEDAVRDQDFTKAGELREKEVELRDQIRSLLQANRTDATAVAEASADQSDAPAAES 485
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
+ P+V E DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA+S+AI
Sbjct: 486 AESSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSKAI 545
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVS
Sbjct: 546 RRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVS 605
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTDSKG
Sbjct: 606 KLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKG 665
Query: 668 RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPE 726
RTVDFKNTL+IMTSN+GS VIEKGG +GF+ + ++S Y RI+SLV EELKQYFRPE
Sbjct: 666 RTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQYFRPE 725
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVFRQL++ EVKEIA+IMLKEVF R+ K I L V++ F+ER+VEEGYNP+Y
Sbjct: 726 FLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNPAY 785
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGD 816
GARPLRRA+MRLLEDS+AE++L+ IK+GD
Sbjct: 786 GARPLRRAVMRLLEDSLAEEVLSGRIKDGD 815
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|352093666|ref|ZP_08954837.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
gi|351680006|gb|EHA63138.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
Length = 860
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/792 (70%), Positives = 650/792 (82%), Gaps = 31/792 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E G GG K PTL+E+GTNLT+LA E KLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVGAGGGGGAKGSTKTPTLDEFGTNLTQLATESKLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD
Sbjct: 186 GRHKEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 246 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+ +TI+IL+GLRERYE HH+
Sbjct: 306 LARGELQCIGATTLDEYRKHIERDAALERRFQPVTVGEPSIPDTIEILRGLRERYEQHHR 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TD AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR +
Sbjct: 366 LKITDAALDAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRAV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS------KAETEAGDVG--- 491
KEK +AVR QDF +AGELRD+E++L+ +I L+ +E S +T G VG
Sbjct: 426 QKEKEDAVRDQDFGRAGELRDKEVELREKIRTLLQSSREESPVNSGDTGQTSEGAVGEAL 485
Query: 492 -----------------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 534
P+V E DI HIV++WTG+PV+K++ ES +LL MEETLHKR+I
Sbjct: 486 SSDSAEGSTAQPQLLTTPIVDEEDIAHIVASWTGVPVQKLTESESVKLLNMEETLHKRLI 545
Query: 535 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 594
GQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIR
Sbjct: 546 GQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIR 605
Query: 595 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 654
LDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++L
Sbjct: 606 LDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLL 665
Query: 655 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKS 713
Q+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRIKS
Sbjct: 666 QLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIKS 725
Query: 714 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 773
LV EELKQYFRPEFLNRLDE+IVFRQL + EVK+IA+IMLKEVF R+ K I L V+ F
Sbjct: 726 LVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKDIAEIMLKEVFARIGDKGITLTVSNAF 785
Query: 774 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV--L 831
+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L IKEGDS VD+D D V V L
Sbjct: 786 KERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLTGRIKEGDSAEVDIDHDKKVVVRHL 845
Query: 832 NGSSGAPESLAD 843
N ++ LA+
Sbjct: 846 NTTTPVTPQLAN 857
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|148241887|ref|YP_001227044.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. RCC307]
gi|147850197|emb|CAK27691.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. RCC307]
Length = 852
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/785 (70%), Positives = 656/785 (83%), Gaps = 27/785 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E A GGG K PTL+E+G+NLT+LA EGKLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEV--ATGGGGKGSTKTPTLDEFGSNLTQLASEGKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +G++PD +E K+V+TLD
Sbjct: 184 GRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIHAGEIPDILEDKRVLTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMDEIRGAANVILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV++TI+IL GLRERYE HH+
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSVEDTIEILMGLRERYEAHHR 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TD+A+V+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+EL+K+LR++
Sbjct: 364 LKITDDAVVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKELDKQLREV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG------------ 488
K+K AVR QDF KAGELR++E++L+ QI + ++ + +E
Sbjct: 424 QKDKETAVREQDFTKAGELREKEVELREQIRGITQNRRDEASSEASESGSTSADATTPAS 483
Query: 489 ---------DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 539
D PVV E DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEA
Sbjct: 484 TTATADTIQDNSPVVNEEDIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEA 543
Query: 540 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 599
VKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE
Sbjct: 544 VKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSE 603
Query: 600 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 659
FMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LED
Sbjct: 604 FMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLED 663
Query: 660 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEE 718
GRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ D+ +++ YNRI+SLV EE
Sbjct: 664 GRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGDDAEETQYNRIRSLVNEE 723
Query: 719 LKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVV 778
LKQYFRPEFLNRLDE+IVFRQL + EVK IADIML+EVF+R+K K I L VTE F+ER+V
Sbjct: 724 LKQYFRPEFLNRLDEIIVFRQLNRDEVKLIADIMLREVFNRMKEKGILLSVTEAFKERLV 783
Query: 779 EEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL-NGSSGA 837
EEGYNP+YGARPLRRA+MRLLEDS+AE+ LA +KEG+S +VDVD D V + G++ A
Sbjct: 784 EEGYNPAYGARPLRRAVMRLLEDSLAEEFLAGRLKEGESALVDVDDDKQVVIRPGGTTSA 843
Query: 838 PESLA 842
P+ LA
Sbjct: 844 PQELA 848
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|113955104|ref|YP_730239.1| Clp protease ATP-binding subunit ClpC [Synechococcus sp. CC9311]
gi|113882455|gb|ABI47413.1| putative Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
CC9311]
Length = 860
Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/785 (69%), Positives = 644/785 (82%), Gaps = 29/785 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E G GG K PTL+E+GTNLT+LA E KLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVGAGGGGGSKGSTKTPTLDEFGTNLTQLATEAKLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI GD+PD +E K+V+TLD
Sbjct: 186 GRHKEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEKRVLTLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 246 IGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+ +TI+IL+GLRERYE HH+
Sbjct: 306 LARGELQCIGATTLDEYRKHIERDAALERRFQPVTVGEPSIADTIEILRGLRERYEQHHR 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ TD AL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR +
Sbjct: 366 LKITDAALDAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRAV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD----------- 489
K+K +AVR QDF +AGELRD+E++L+ +I L+ +E + A + D
Sbjct: 426 QKDKEDAVRDQDFSRAGELRDKEVELREKIRTLLQSSREEAPANSGDADQTTDAAAGEAA 485
Query: 490 ---------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 534
PVV E DI HIV++WTG+PV+K++ ES +LL MEETLHKR+I
Sbjct: 486 ASAAPEGSTAQPQLLTTPVVDEEDIAHIVASWTGVPVQKLTESESVKLLNMEETLHKRLI 545
Query: 535 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 594
GQDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIR
Sbjct: 546 GQDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIR 605
Query: 595 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 654
LDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++L
Sbjct: 606 LDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLL 665
Query: 655 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKS 713
Q+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRIKS
Sbjct: 666 QLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIKS 725
Query: 714 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 773
LV EELKQYFRPEFLNRLDE+IVFRQL + EVK+IA+IMLKEVF R+ K I L V+ F
Sbjct: 726 LVNEELKQYFRPEFLNRLDEIIVFRQLNREEVKDIAEIMLKEVFARIGDKGITLTVSNAF 785
Query: 774 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
+ER+VEEGYNP+YGARPLRRA+MRLLEDS+AE++L IKEGDS VD+D D V V +
Sbjct: 786 KERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLTGRIKEGDSAEVDIDDDKKVVVRHL 845
Query: 834 SSGAP 838
+ P
Sbjct: 846 KTATP 850
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|427701534|ref|YP_007044756.1| chaperone ATPase [Cyanobium gracile PCC 6307]
gi|427344702|gb|AFY27415.1| ATPase with chaperone activity, ATP-binding subunit [Cyanobium
gracile PCC 6307]
Length = 849
Score = 1072 bits (2773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/758 (71%), Positives = 638/758 (84%), Gaps = 23/758 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +RTQVIRM+GE+ E G GS+ K PTL+E+G+NLT+LA E KLDPVV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVTSGSSGKGST--KTPTLDEFGSNLTQLAAESKLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI G++PD +E K+V+TLD
Sbjct: 184 GRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRITQGEIPDILEDKRVLTLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+MEEI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 244 IGLLVAGTKYRGEFEERLKKIMEEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPSV +TI+ILKGLRERYE HH+
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVVDTIEILKGLRERYEQHHR 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEALV+AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++K+LR +
Sbjct: 364 LKISDEALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKQLRGV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKA----ETE-----AGDVG 491
KEK +AVR QDF KAGELRD+E++L+ QI ++ ++ A ET+ G V
Sbjct: 424 QKEKEDAVRQQDFTKAGELRDKEVELRDQIRTILQARRDDEPAGNSGETDTPALLGGPVA 483
Query: 492 ---------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 542
P+VTE DI IV++WTG+PV+K++ ES +LL MEETLH+R+IGQDEAVKA
Sbjct: 484 DDASEESRSPLVTEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKA 543
Query: 543 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 602
+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSE+AMIRLDMSEFME
Sbjct: 544 VSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFME 603
Query: 603 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 662
RHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ+LEDGRL
Sbjct: 604 RHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRL 663
Query: 663 TDSKGRTVDFKNTLLIMTSNVGSSVIEK-GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 721
TDSKGRTVDFKNTL+IMTSN+GS VIEK GG D +++ YNRI+SLV EELKQ
Sbjct: 664 TDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFGGGDVEETQYNRIRSLVNEELKQ 723
Query: 722 YFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEG 781
YFRPEFLNRLDE+IVFRQLT+ EVK IA+IML+EVF R++ K I + VTE F+ER+VEEG
Sbjct: 724 YFRPEFLNRLDEIIVFRQLTRDEVKLIAEIMLREVFARMQDKGIGMSVTEAFKERLVEEG 783
Query: 782 YNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 819
YNPSYGARPLRRA+MRLLEDS+AE+ L+ I EGD+ +
Sbjct: 784 YNPSYGARPLRRAVMRLLEDSLAEEFLSGRIGEGDACL 821
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|452821448|gb|EME28478.1| [pt] ATP-dependent Clp protease ATP-binding subunit ClpB [Galdieria
sulphuraria]
Length = 847
Score = 1071 bits (2770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/755 (68%), Positives = 634/755 (83%), Gaps = 7/755 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ LA EEA+ +GHNY+G+EHLLLGLL EG+GVA +VLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELAIEEAKFIGHNYVGTEHLLLGLLSEGDGVATKVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D +R Q + ++ E +E V A G +K PTLEE+G NLT+LA EGKLDPVV
Sbjct: 126 NLGVDLEQLRQQTMDLIIEESEFVNAN-AYGYVRSKTPTLEEFGVNLTQLAIEGKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA DVP+ +E K+V+ LD
Sbjct: 185 GREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIAKQDVPNLLEDKQVVNLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLL+AGTKYRGEFEERLK++++EI+ + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 245 IGLLIAGTKYRGEFEERLKRIIDEIRAINNVILVIDEVHTLIGAGAAEGAIDAANILKPI 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYRKHIEKD ALERRFQP+ V EP+V+ETI+IL GLR+RYE+HHK
Sbjct: 305 LARGELQCIGATTLEEYRKHIEKDAALERRFQPIIVGEPTVEETIEILYGLRDRYELHHK 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEAL +AA+L++QYISDRFLPDKAIDL+DEAGSRVRL A+ P+ L+KEL++I
Sbjct: 365 LVISDEALNAAAKLAHQYISDRFLPDKAIDLVDEAGSRVRLMQAKTPKIESNLDKELKEI 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K EA+R QDF +A LR+RE+++K+QI AL K SK E + PVVTE DI
Sbjct: 425 LKQKEEAIRSQDFTQATNLREREIEIKSQIVALAKSKKIESKVEKDP----PVVTEEDIA 480
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+VS+WTGIP+ K++ ES++LL MEETLH R+IGQDEAV A+SRAIRRARVGLKNPNRP
Sbjct: 481 AVVSSWTGIPLSKLTKSESEKLLNMEETLHSRIIGQDEAVSAVSRAIRRARVGLKNPNRP 540
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGSE AM+RLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 541 IASFIFSGPTGVGKTELTKALASYFFGSESAMVRLDMSEYMERHTVSKLIGSPPGYVGYN 600
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTE VRR+PYTV+LFDEIEKAHPDVFN++LQILEDGRLTD+KG TVDFKNTLLIMT
Sbjct: 601 EGGQLTEVVRRKPYTVILFDEIEKAHPDVFNILLQILEDGRLTDAKGHTVDFKNTLLIMT 660
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VI+KGG +GF+L + +S YNRI+SLV EELKQYFRPEF+NRLDE+IVFRQL
Sbjct: 661 SNIGSKVIDKGGSNLGFELSASQMESHYNRIRSLVNEELKQYFRPEFINRLDEIIVFRQL 720
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EV EIA++MLKEVFDRL+ K+I+++VT+RF+ R++EEGYNP YGARPLRRA+MRLLE
Sbjct: 721 TKNEVGEIANLMLKEVFDRLEKKNIKIEVTDRFKGRLIEEGYNPVYGARPLRRAVMRLLE 780
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
D +AE++L++ ++ D+ +VD+D + V +L +
Sbjct: 781 DKLAEEILSQRLQASDTAVVDLDENNQVIILTSKN 815
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIK IML+QEEARRLGHN++G+E +LLGLL E G+A++VL+ +G + R
Sbjct: 1 MFERFTEKAIKAIMLSQEEARRLGHNFVGTEQVLLGLLAESNGLASKVLKLMGVTLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|116073045|ref|ZP_01470307.1| ATPase [Synechococcus sp. RS9916]
gi|116068350|gb|EAU74102.1| ATPase [Synechococcus sp. RS9916]
Length = 859
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/758 (71%), Positives = 637/758 (84%), Gaps = 28/758 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D + +RTQVIRM+GE+ E GGG+ G K PTL+E+G+NLT+LA EGKLDPV
Sbjct: 126 NLGVDLAKVRTQVIRMLGETAEVGAGSSGGGAKGSTKTPTLDEFGSNLTQLAGEGKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +I+RV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +GD+PD +E K+V+TL
Sbjct: 186 VGRQHEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQTGDIPDILEDKRVLTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEEIK + +IL IDEVHTLIGAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPS+ +TI+IL+GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIPDTIEILRGLRERYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L+ TDEAL +AA L +YISDRFLPDKAIDLIDEAGSRVRL +++LP A+E++KELR
Sbjct: 366 RLKITDEALEAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVDKELRS 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE-------------------- 479
+ KEK EAVR QDF KAGELRD+E++L+ QI +L+ ++
Sbjct: 426 VQKEKEEAVREQDFTKAGELRDKEVELREQIRSLLQNSRDGLEAPAADADSAPAGESTVT 485
Query: 480 MSKAETEAGD----VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 535
A+ +G+ PVV E DI IV++WTG+PV+K++ ES +LL MEETLHKR+IG
Sbjct: 486 SVSADAPSGESATLTTPVVDEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIG 545
Query: 536 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 595
QDEAVKA+S+AIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRL
Sbjct: 546 QDEAVKAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRL 605
Query: 596 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 655
DMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQ
Sbjct: 606 DMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQ 665
Query: 656 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSL 714
+LEDGRLTDSKGRTVDFKNTL+IMTSN+GS VIEKGG +GF+ + +++ YNRI+SL
Sbjct: 666 LLEDGRLTDSKGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSL 725
Query: 715 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 774
V EELKQYFRPEFLNRLDE+IVFRQL + EVK+IADIML+EVF R+ K I L V+E F+
Sbjct: 726 VNEELKQYFRPEFLNRLDEIIVFRQLNRDEVKQIADIMLREVFSRIGEKGITLTVSEAFK 785
Query: 775 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
ER+VEEG+NP+YGARPLRRA+MRLLEDS+AE++L+ I
Sbjct: 786 ERLVEEGFNPAYGARPLRRAVMRLLEDSLAEEVLSGRI 823
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 60/71 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL+++G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 VEVEKIIGRGS 71
>gi|374249468|ref|YP_005088687.1| clpC gene product [Phaeocystis antarctica]
gi|340008159|gb|AEK26791.1| Clp protease ATP binding subunit [Phaeocystis antarctica]
Length = 830
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/754 (69%), Positives = 634/754 (84%), Gaps = 10/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A + + L+ EEAR+LGHNYIG+EHLLLGL+ EGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRCLELSLEEARQLGHNYIGTEHLLLGLIVEGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN--KMPTLEEYGTNLTKLAEEGKLDP 198
L + +RT++IR +GE+T+ V S+ N K PTL+E+GTNLT+ A +GKLDP
Sbjct: 126 QLDVNLPKLRTEIIRALGENTK-----VNSDSNANRSKSPTLDEFGTNLTQKALDGKLDP 180
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
VVGR+ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPDT+EGK V+
Sbjct: 181 VVGREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANRDVPDTLEGKLVVA 240
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LD+GLL+AGTKYRGEFEERLK++MEE+ S EIIL IDEVHTLIGAGAAEGAIDAANILK
Sbjct: 241 LDIGLLIAGTKYRGEFEERLKRIMEEVSTSGEIILVIDEVHTLIGAGAAEGAIDAANILK 300
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+L+RGELQCIGATT++EYRKHIEKD ALERRFQPV V EPSVDETI+IL GLR+RYE H
Sbjct: 301 PALSRGELQCIGATTIEEYRKHIEKDAALERRFQPVMVNEPSVDETIEILFGLRDRYERH 360
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
HKL +DEAL +AA+ + QYI+DRFLPDKAIDLIDEAGSRVRL +LP A++LE E R
Sbjct: 361 HKLTISDEALTAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMSFRLPAVAKQLEDEKR 420
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEM-SKAETEAGDVGPVVTEV 497
++ K K+ A+R QDFE AG+LR RE+++ AQI A++ K + A+ + P+VTE
Sbjct: 421 ELLKSKDAAIRSQDFELAGKLRLRELEINAQIQAVIWSAKGGDTPADQDQKVEAPIVTEE 480
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
DI IVS+WTG+PV K++ ESD+LL MEETLH R+IGQDEAV A+S+AIRRARVGLKNP
Sbjct: 481 DIAQIVSSWTGVPVNKLTRSESDKLLNMEETLHGRIIGQDEAVAAVSKAIRRARVGLKNP 540
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
NRPIASFIF+GPTGVGK+EL KALA+Y+FGSE+AM+RLDMSE+MERHTVSKLIGSPPGYV
Sbjct: 541 NRPIASFIFAGPTGVGKTELTKALASYFFGSEDAMVRLDMSEYMERHTVSKLIGSPPGYV 600
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY +GGQLTEAVRRRPYTVVLFDE+EKAH DVFN++LQI EDGRLTDS+GRT+DFK+TLL
Sbjct: 601 GYDQGGQLTEAVRRRPYTVVLFDEVEKAHQDVFNLLLQIFEDGRLTDSRGRTIDFKSTLL 660
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
I+TSN+GS VIEKGG +GF+L DE + YNRI++LV EELKQYFRPEFLNRLDE+IVF
Sbjct: 661 ILTSNIGSKVIEKGGGGLGFELSEDETEFQYNRIQALVNEELKQYFRPEFLNRLDEIIVF 720
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
RQLTK EV +I+++MLKEVF R+ K I+L+VTERFR +V+EGYNP+YGARPLRRAIMR
Sbjct: 721 RQLTKNEVGQISELMLKEVFSRIAAKGIQLEVTERFRVHLVDEGYNPTYGARPLRRAIMR 780
Query: 798 LLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
LLED++AE++L+ +IK GD +VD+D D V +
Sbjct: 781 LLEDNLAEEVLSEKIKTGDIAVVDIDIDNKVKIF 814
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 56/68 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GV ++L+++G + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGSGVGPKILKSMGVKLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 IEVEKIIG 68
>gi|456062009|ref|YP_007476253.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
gi|449327196|gb|AGE93752.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
Length = 845
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/757 (69%), Positives = 628/757 (82%), Gaps = 7/757 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIG+EHLLLGL+RE EGVA RVLE
Sbjct: 68 GRGTGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIRENEGVATRVLE 125
Query: 141 NLGA-DPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG S +RTQVIR +GE+ E G NK PTLEE+GT+LT+ AE G LDPV
Sbjct: 126 NLGVVFLSKLRTQVIRSLGETEEVFVGSNSQGQGRNKAPTLEEFGTDLTEKAEAGTLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
+GR+ +IERV+QILGRRTKNNP LIGEPGVGKT+IAEGLAQRI + DVPD +E K V+TL
Sbjct: 186 IGREKEIERVIQILGRRTKNNPILIGEPGVGKTSIAEGLAQRIIAKDVPDILEDKSVVTL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+GLLVAGTKYRGEFEERLKK+MEE++ + EIIL IDEVHTL+GAGAAEGAIDAANILKP
Sbjct: 246 DIGLLVAGTKYRGEFEERLKKIMEEVRVNSEIILVIDEVHTLVGAGAAEGAIDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTL+EYRKHIEKD ALERRFQPV V EPSVDETI+IL GLRERYE HH
Sbjct: 306 ALARGELQCIGATTLEEYRKHIEKDAALERRFQPVMVGEPSVDETIEILYGLRERYEKHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
KL DEA+ +AA L+ QYI+DRFLPDKAIDLIDE SRVRL ++ LP A++L+KELR+
Sbjct: 366 KLVIRDEAICAAATLADQYIADRFLPDKAIDLIDEGSSRVRLLNSLLPPAAKQLDKELRK 425
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGK-EMSKAETEAGDVGPVVTEVD 498
I KEK+EAVR QDFEKAGELR+RE++ K QI ALV + K E + G++ V+E +
Sbjct: 426 IIKEKDEAVRSQDFEKAGELRERELETKTQI-ALVGRNKGEGGRFAKNKGEL--FVSEDN 482
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I IV++WTGIPV K+S ES++L+ ME+TLH R+IGQ+EAV AISRAIRRARVGLKNPN
Sbjct: 483 IAEIVASWTGIPVNKLSKSESEKLMNMEKTLHGRIIGQNEAVVAISRAIRRARVGLKNPN 542
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASFIFSGPTGVGK+EL KALA+Y+FGS E+M+RLDMSE+MERHTVSKLIGSPPGYVG
Sbjct: 543 RPIASFIFSGPTGVGKTELTKALASYFFGSVESMVRLDMSEYMERHTVSKLIGSPPGYVG 602
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPY+VVLFDEIEKAHPDVFN++LQI EDGRLTDSKGRT+DFKNTLLI
Sbjct: 603 YNEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNLLLQIFEDGRLTDSKGRTIDFKNTLLI 662
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
+TSN+GS VIEK G +GF+ D+ +S YNRIK LV EELKQYFRPEFLNRLDE+IVFR
Sbjct: 663 LTSNIGSKVIEKSGGDLGFEFSQDQSESEYNRIKVLVNEELKQYFRPEFLNRLDEIIVFR 722
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QLTK +V +IADIML EVF+R+ K I +++T++F+E+V+ G+NPSYGARPLRRA+ L
Sbjct: 723 QLTKDQVGQIADIMLAEVFERISKKGISVEITDKFKEKVINSGFNPSYGARPLRRAVQSL 782
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
+ED +AE++L+ I GDS+++D DG VL S
Sbjct: 783 IEDVLAEEVLSARIVSGDSIVIDAKDDGTSVVLKNDS 819
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEE+RRLGHN++G+E +LLGL+ EG G+A +VL ++G + R
Sbjct: 1 MFERFTEKAIKVIMLAQEESRRLGHNFVGTEQILLGLIGEGTGLAFKVLNSMGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G T
Sbjct: 61 IEVEKVIGRGT 71
>gi|428319462|ref|YP_007117344.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|428243142|gb|AFZ08928.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 822
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/760 (67%), Positives = 625/760 (82%), Gaps = 14/760 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GF+ + FT + ++ A EAR+LGHNYIG+EH+LLGL+++ EGVAA+VL+
Sbjct: 68 GRGSGFLPPEI--PFTPRVKRIFETALNEARQLGHNYIGTEHILLGLIQDDEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D +RTQVIR VGE G G G SG+ K+PTLEE+GTNLTKLA GKLDPV
Sbjct: 126 NLGIDRQRVRTQVIRAVGEVAAVPG---GRGDSGDRKIPTLEEFGTNLTKLAAAGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IERV+Q+LGRRTKNNP L+GEPGVGKTA+AEGLAQRI + +VP+ +E K+VI+L
Sbjct: 183 VGRENEIERVIQVLGRRTKNNPVLVGEPGVGKTALAEGLAQRIVNRNVPEILEDKQVISL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMG L+AGTK+RGEFEERL K+M EI+ + IIL IDE+HTL+GAGA +G++DA+N+LKP
Sbjct: 243 DMGSLIAGTKFRGEFEERLAKIMAEIRAAGNIILVIDEIHTLVGAGAIQGSMDASNMLKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQC+GATTLDEYRKHIE+D ALERRFQP+KV EPSV ETI+IL GLR YE HH
Sbjct: 303 ALARGELQCVGATTLDEYRKHIERDAALERRFQPIKVGEPSVAETIEILYGLRSAYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L +D AL +AA LS +YI+DRFLPDKAIDLIDEAGSRVR+ ++Q P E +EL+K+L
Sbjct: 363 RLTISDAALEAAATLSDRYINDRFLPDKAIDLIDEAGSRVRVMNSQTPPEVKELKKQLPA 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+TKEK+ AVR QDF+KAG+LRDRE++++A+I+A ++ + P VTE DI
Sbjct: 423 VTKEKDAAVREQDFDKAGKLRDRELEIEAEIAAATINKSQLKTS--------PTVTEEDI 474
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV+ WTG+PV K++ ES+ LL ME+TLH+R+IGQ+EAV A+SRAIRRARVGLKNPNR
Sbjct: 475 AHIVANWTGVPVSKLTESESELLLHMEDTLHQRLIGQEEAVTAVSRAIRRARVGLKNPNR 534
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 535 PIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 594
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 595 DEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDAKGRTVDFKNTLLIM 654
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ D YNR++SLV EELKQ+FRPEF+NRLDE+IVFRQ
Sbjct: 655 TSNIGSRVIEKGGGGLGFEFAESAADGQYNRVRSLVNEELKQFFRPEFINRLDEIIVFRQ 714
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L + EVK+IADIML++VF RL + I L VTERF++ +V EGYNPSYGARPLRRAIMRLL
Sbjct: 715 LNREEVKQIADIMLQQVFSRLTEQGITLSVTERFKDLLVTEGYNPSYGARPLRRAIMRLL 774
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 839
ED +AE+ML+ ++K+G IVDVD +G V ++ P+
Sbjct: 775 EDVLAEEMLSGKLKDGQKAIVDVDENGQVKIVPDGPSEPK 814
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+AIK IMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL ++G + R
Sbjct: 1 MFERFTEQAIKAIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAAKVLLDMGLNLKEAR 60
Query: 151 TQVIRMVGEST 161
++ ++G +
Sbjct: 61 NEIENIIGRGS 71
>gi|354564772|ref|ZP_08983948.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
gi|353549898|gb|EHC19337.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
Length = 820
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/751 (68%), Positives = 619/751 (82%), Gaps = 13/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR G++ + FT K + A +EAR LGHNYIG+EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGYLPPEI--PFTPKVKTLFEQAFKEARSLGHNYIGTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D NIR+ VIR++GE T G G S + TLEE+G NLTKLA+EGKLDPV
Sbjct: 126 NLGVDLKNIRSTVIRLLGEVTPMTVGGSGSSSPRRTQTLTLEEFGRNLTKLAQEGKLDPV 185
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD ++ K+VI+L
Sbjct: 186 VGREKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIHNQDVPDILQDKQVISL 245
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMGLLVAGT++RG+FEERLKK+M+EI+ IIL IDE+HTL+GAG EG +DAANILKP
Sbjct: 246 DMGLLVAGTRFRGDFEERLKKIMDEIRSERNIILVIDEIHTLVGAGGVEGGMDAANILKP 305
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LA+GELQCIGATTLDEYR+HIE+D ALERRFQP+ V EPSV++TI IL+GLR YE HH
Sbjct: 306 ALAKGELQCIGATTLDEYRQHIERDAALERRFQPIMVGEPSVEDTIVILQGLRSVYEQHH 365
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
++ TD+ALV+AA LS +YISDRFLPDKAIDLIDEAGSRVRLR + + RE+++EL
Sbjct: 366 RVEITDQALVAAANLSDRYISDRFLPDKAIDLIDEAGSRVRLRSSMVAAN-REIKRELAT 424
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+TK K+EAVR QDF+KA ELRDRE++L+AQ++ K +++ VV E DI
Sbjct: 425 VTKNKDEAVRAQDFDKAAELRDRELELEAQLADTTQSDKSVNRL---------VVNEEDI 475
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV+AWTG+PV K++ ES+ LL +E+TLH+R+IGQ++AV A+SRAIRRARVGLKNPNR
Sbjct: 476 AQIVAAWTGVPVNKLTESESEMLLHLEDTLHQRLIGQEQAVTAVSRAIRRARVGLKNPNR 535
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASF+FSGPTGVGK+ELAK+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 536 PIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 595
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+
Sbjct: 596 DEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIIL 655
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF DE ++SYNRI++LV EE+K YFRPEFLNRLDE+IVF Q
Sbjct: 656 TSNIGSRVIEKGGGGLGFQFSEDEAEASYNRIRNLVNEEMKNYFRPEFLNRLDEIIVFTQ 715
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVK+IA+IMLKEV DRL K I L+V++RF+ERV++EGYNPSYGARPLRRAIMRLL
Sbjct: 716 LKKEEVKQIAEIMLKEVADRLTEKGITLEVSDRFKERVLQEGYNPSYGARPLRRAIMRLL 775
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE +L+ +I +GD+ IVDVD DG V V
Sbjct: 776 EDSLAEALLSGQITDGDTAIVDVDDDGQVRV 806
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 53/68 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKV+MLAQEEARRLGHN++G+E +LLGLL EG GVAA+VL LG R
Sbjct: 1 MFEHFTSEAIKVVMLAQEEARRLGHNFVGTEQILLGLLGEGNGVAAKVLTELGVTLKEAR 60
Query: 151 TQVIRMVG 158
+V R++G
Sbjct: 61 REVERIIG 68
>gi|113476893|ref|YP_722954.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167941|gb|ABG52481.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/750 (67%), Positives = 633/750 (84%), Gaps = 10/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GF + FT + +++ ++ EEAR+L HNYIG+EHLLLGLL++ EGVAA+VL+
Sbjct: 68 GRGSGFTPAEI--PFTPRVKRMLEISLEEARKLDHNYIGTEHLLLGLLQDSEGVAAKVLD 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D IRTQVIR +GE AV G G SG K TLEE+GT+LTKLA EGK+DP+V
Sbjct: 126 NLGVDKGKIRTQVIRSLGE-VAAVAPG-GSTPSGKKAVTLEEFGTDLTKLAAEGKIDPIV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERV+Q+LGRRTKNNP LIGEPGVGKTA+AEGLAQRI + DVPD +E K+V++L+
Sbjct: 184 GRKTEIERVIQVLGRRTKNNPVLIGEPGVGKTALAEGLAQRIINQDVPDILENKQVVSLN 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+G L+AGT++RGEFEERLKK+M+EI+ + IIL IDE+HT++GAGA EG++DAANILKP+
Sbjct: 244 IGSLIAGTRFRGEFEERLKKIMDEIRANGNIILVIDEIHTVVGAGAIEGSMDAANILKPA 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQPVKV EPSV++TI+IL G+R YE HH+
Sbjct: 304 LARGELQCIGATTLDEYRKHIERDAALERRFQPVKVGEPSVEQTIEILYGVRSAYEQHHR 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEAL +AAQLS +YISDRFLPDKAIDLIDEAGSRVR++++ + + REL +EL ++
Sbjct: 364 LTISDEALRAAAQLSDRYISDRFLPDKAIDLIDEAGSRVRVKNSMVSPQLRELRRELSRV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K E VR QDFEKA +LRDRE+ ++A+I ++ +++ PVVTE DI
Sbjct: 424 IKDKEETVRQQDFEKASQLRDRELGIQAEIEETTSNKQDKKNSKS------PVVTEDDIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES++LL +E+TLH+R+IGQ++AVKA+SRA+RRARVGLKNP RP
Sbjct: 478 DIVASWTGVPVSKLTESESEKLLHIEDTLHQRLIGQEDAVKAVSRALRRARVGLKNPKRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKL+GSPPG+VGY
Sbjct: 538 IASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLVGSPPGFVGYD 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN+MLQ+LEDGRLTDSKGR VDFKNTL+IMT
Sbjct: 598 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNIMLQVLEDGRLTDSKGRVVDFKNTLIIMT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D++++ YNRI++LV EELKQYFRPEFLNRLDE+IVFRQL
Sbjct: 658 SNIGSQVIEKGGGGLGFEFAEDKEEAQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQL 717
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVKEIA+IML+EVF RL ++I L V+++F++R++E+G++PSYGARPLRRAIMRLLE
Sbjct: 718 TKDEVKEIAEIMLREVFSRLGDREITLTVSDKFKDRLIEDGFDPSYGARPLRRAIMRLLE 777
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D +AE +LA +I++G++V VD+D + V V
Sbjct: 778 DVLAEALLAGKIQDGENVYVDLDENREVKV 807
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE++IKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+A++VL+ G + + R
Sbjct: 1 MFERFTEQSIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIASKVLKENGVNLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 NEVEKIIG 68
>gi|334117325|ref|ZP_08491417.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|333462145|gb|EGK90750.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
Length = 822
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/760 (67%), Positives = 624/760 (82%), Gaps = 14/760 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GF+ + FT + ++ A EAR+LGHNYIG+EH+LLGL+++ EGVAA+VL+
Sbjct: 68 GRGSGFLPPEI--PFTPRVKRIFETALNEARQLGHNYIGTEHILLGLIQDDEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D +RTQVIR VGE G G G SG+ K PTLEE+GTNLTKLA GKLDPV
Sbjct: 126 NLGIDRQRVRTQVIRAVGEVAAVPG---GRGESGDRKTPTLEEFGTNLTKLAAAGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IERV+Q+LGRRTKNNP L+GEPGVGKTA+AEGLAQRI + +VP+ +E K+VI+L
Sbjct: 183 VGRENEIERVIQVLGRRTKNNPVLVGEPGVGKTALAEGLAQRIVNRNVPEILEDKQVISL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMG L+AGTK+RGEFEERL K+M EI+ + IIL IDE+HTL+GAGA +G++DA+N+LKP
Sbjct: 243 DMGSLIAGTKFRGEFEERLTKIMAEIRAAGNIILVIDEIHTLVGAGAIQGSMDASNMLKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQC+GATTL+EYRKHIE+D ALERRFQP+KV EPSV ETI+IL GLR YE HH
Sbjct: 303 ALARGELQCVGATTLEEYRKHIERDAALERRFQPIKVGEPSVAETIEILYGLRSAYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
+L +D AL +AA LS +YI+DRFLPDKAIDLIDEAGSRVR+ ++Q P E +EL+K+L
Sbjct: 363 RLTISDAALEAAATLSDRYINDRFLPDKAIDLIDEAGSRVRVMNSQTPPEVKELKKQLPA 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+TKEK+ AVR QDF+KAG+LRDRE++++A+I+ ++ + P+VTE DI
Sbjct: 423 VTKEKDAAVREQDFDKAGKLRDRELEIEAEIAEATINKSQLKTS--------PIVTEEDI 474
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HIV+ WTG+PV K++ ES+ LL ME+TLH+R+IGQ+EAV A+SRAIRRARVGLKNPNR
Sbjct: 475 AHIVANWTGVPVSKLTESESELLLHMEDTLHQRLIGQEEAVSAVSRAIRRARVGLKNPNR 534
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+EL KALA Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY
Sbjct: 535 PIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 594
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNMMLQILEDGRLTD+KGRTVDFKNTLLIM
Sbjct: 595 DEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMMLQILEDGRLTDAKGRTVDFKNTLLIM 654
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ D YNR++SLV EELKQ FRPEF+NRLDE+IVFRQ
Sbjct: 655 TSNIGSRVIEKGGGGLGFEFAESAADGQYNRVRSLVNEELKQVFRPEFINRLDEIIVFRQ 714
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L + EVK+IADIML++VF RL + I L VT+RF++ +V EGYNPSYGARPLRRAIMRLL
Sbjct: 715 LNREEVKQIADIMLQQVFSRLTEQGITLSVTDRFKDLLVTEGYNPSYGARPLRRAIMRLL 774
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 839
ED +AE+ML+ ++K+G IVDVD +G V V+ S P+
Sbjct: 775 EDVLAEEMLSGKLKDGQKAIVDVDENGQVKVVPDGSSEPK 814
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+AIK IMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+VL ++G + R
Sbjct: 1 MFERFTEQAIKAIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAAKVLLDMGLNLKEAR 60
Query: 151 TQVIRMVGEST 161
++ ++G +
Sbjct: 61 NEIENIIGRGS 71
>gi|428309817|ref|YP_007120794.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428251429|gb|AFZ17388.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 827
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/753 (66%), Positives = 630/753 (83%), Gaps = 6/753 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT ++ +V+ L+ EE+R LG +Y+G+EHLLLGL+R+GEGVAARVL
Sbjct: 68 GRGSGFV--AVEIPFTPRSKRVLELSLEESRTLGQDYVGTEHLLLGLIRDGEGVAARVLL 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D +R +VI M+ E+ + A + K PTL+E GTNLT+LA +GKLDPVV
Sbjct: 126 NLGVDSKEVRAKVIEMLSEAKPTLNAP---SRTRTKTPTLDECGTNLTQLAAQGKLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ ++ER++QIL RRTKNNP LIGEPGVGKTA+AEGLAQRI + DVP +++GK+V+TLD
Sbjct: 183 GRRKEVERMIQILVRRTKNNPILIGEPGVGKTALAEGLAQRIINNDVPISLQGKQVLTLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
G L+AGTKYRGEFEERLKK++EEI+ IIL +DEVHTL+GAGA G++DAANILKP+
Sbjct: 243 TGSLLAGTKYRGEFEERLKKIIEEIRSCQNIILMVDEVHTLVGAGAVSGSLDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGE+QCIGATTLDEYRK+IE+D ALERRFQPV V EPSV+ETI+IL GLR+RYE HH+
Sbjct: 303 LARGEIQCIGATTLDEYRKYIERDAALERRFQPVMVDEPSVEETIEILYGLRDRYEQHHQ 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
++ +D AL +AA+LS +YISDRFLPDKAIDLIDEAGSRVR+ ++++P A+ L+KELRQ+
Sbjct: 363 IKISDLALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRILNSKVPSSAKSLKKELRQV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K +A+ Q+F KAG++R +E+ ++A+I AL+ + + + ++ + D P+V + DI
Sbjct: 423 LKDKGDAIGLQEFSKAGQMRAQEIRIQAEIRALI-QNEPSNVSDADEVDYAPIVNQEDIA 481
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIV++WTGIPV K++ ES +LL+ME+ LH+R++GQ+EAVKAISRAIRRARVG+ NPNRP
Sbjct: 482 HIVASWTGIPVNKLTESESSKLLQMEDILHQRLVGQEEAVKAISRAIRRARVGISNPNRP 541
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAK+LAAY+FGSE AMIRLDMSE+MERHTVSKLIGSPPGYVG+
Sbjct: 542 IASFIFSGPTGVGKTELAKSLAAYFFGSESAMIRLDMSEYMERHTVSKLIGSPPGYVGFN 601
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRL+D+KGRTVDF+NTLLIMT
Sbjct: 602 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLSDTKGRTVDFRNTLLIMT 661
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GFD ++ D+ Y I SLV EELK YFRPEFLNRLDE+IVFRQL
Sbjct: 662 SNIGSKVIEKGGGGLGFDWSENQADAQYRGISSLVNEELKAYFRPEFLNRLDEIIVFRQL 721
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+K EVK+IA I+L EVF RLK + I L+VTERF++R+VEEGY+PSYGARPLRRAI RLLE
Sbjct: 722 SKNEVKQIASILLNEVFSRLKEQGITLEVTERFKDRLVEEGYDPSYGARPLRRAITRLLE 781
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
D +AE++L+ ++E D+V+VD+D G + VL G
Sbjct: 782 DCLAEEILSGRLQEADTVVVDIDDQGQIKVLQG 814
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT+ AIKVI LAQEEARRLGHN++G+E +LLGL+ E +G+AA VL++LG +R
Sbjct: 1 MFERFTDTAIKVIRLAQEEARRLGHNFVGTEQILLGLIGEADGIAATVLQSLGITIQEVR 60
Query: 151 TQVIRMVG 158
++ +++G
Sbjct: 61 EEIEKIIG 68
>gi|30468134|ref|NP_849021.1| Clp protease ATP binding subunit [Cyanidioschyzon merolae strain
10D]
gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/752 (69%), Positives = 640/752 (85%), Gaps = 9/752 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ +EAR L HNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSLDEARILSHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LG D + +R+ V+RM+ E++E V +GGG S ++ PTLEE+G NLT+LA EG+LDPVV
Sbjct: 126 SLGVDLATLRSLVLRMLDETSEVV---IGGGYSRSRTPTLEEFGVNLTELAMEGELDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA D+PD +E KVITLD
Sbjct: 183 GREKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIADRDIPDILEDMKVITLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLLVAGTKYRGEFEERLKK+M+EI++ +IL IDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 243 IGLLVAGTKYRGEFEERLKKVMDEIREVGNVILVIDEVHTLIGAGAAEGAIDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYRKHIEKD ALERRFQPV V EP+VDETI+ILKGLR+RYE HH+
Sbjct: 303 LARGELQCIGATTLEEYRKHIEKDAALERRFQPVMVGEPTVDETIEILKGLRDRYEEHHR 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+R +D AL +AA+LS QYI+DR+LPDKAIDLIDEAGSRVRL + +LP+ EL+KELR++
Sbjct: 363 VRISDAALEAAAKLSSQYIADRYLPDKAIDLIDEAGSRVRLMYYKLPKVTLELDKELREV 422
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
+ K+E +R FE A ELRDRE ++++QI A+ +E + + + PVV+E DI
Sbjct: 423 MRLKDEMIREDHFEIAAELRDREKEIRSQIMAMTKSHRE--ETQEQILQARPVVSEEDIA 480
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTGIPV+K++ ES++LL MEETLH+R++GQ+EAV A+S+AIRRARVGLKNPNRP
Sbjct: 481 QIVASWTGIPVKKLTRSESEKLLHMEETLHQRIVGQNEAVSAVSKAIRRARVGLKNPNRP 540
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA+Y+FGS EAM+RLDMSE+MERHTVSKLIGSPPGYVGY
Sbjct: 541 IASFIFSGPTGVGKTELTKALASYFFGSNEAMVRLDMSEYMERHTVSKLIGSPPGYVGYN 600
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVR+RPYTV+LFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNTLLIMT
Sbjct: 601 EGGQLTEAVRKRPYTVILFDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTLLIMT 660
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS +IEKGG +GF+L +D+ Y+R+K+LV EELKQYFRPEFLNR+DE+IVFRQL
Sbjct: 661 SNIGSKIIEKGGGGLGFELGDSWQDTQYSRLKNLVNEELKQYFRPEFLNRIDEIIVFRQL 720
Query: 741 TKLEVKEIADIMLKEVFDRL-KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
TK EV +IA++MLKEV+DRL + + I+LQVT+RF+ +++EEGY+ +YGARPLRRAIM+ L
Sbjct: 721 TKEEVGQIAEMMLKEVYDRLAQQQQIQLQVTDRFKRKIIEEGYSATYGARPLRRAIMKWL 780
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
ED +AE +LA + G + +VD+D + +V VL
Sbjct: 781 EDPLAEHVLANTLSPGMTAVVDLDGE-DVKVL 811
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 56/68 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AAR L+ LG D R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGLAARALKTLGVDLKEAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|434395188|ref|YP_007130135.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428267029|gb|AFZ32975.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 822
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/754 (68%), Positives = 619/754 (82%), Gaps = 17/754 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR FV + FT K +V A EAR+LG+NYI +EH+LLGLLREG+GVAA+VL
Sbjct: 68 GRGNRFVPAEL--PFTPKVKRVFEQALAEARQLGNNYIDTEHILLGLLREGDGVAAKVLS 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLD 197
NLG P IRT VI+ GE AV G G + +K TL+E+ TNLTKLA EGKLD
Sbjct: 126 NLGIHPEQIRTAVIKKHGE-VAAVSVGNTDRRSGRTASKTATLDEFSTNLTKLAAEGKLD 184
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PVVGR+ +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + +VPD +E ++V+
Sbjct: 185 PVVGREKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQNVPDILEDRQVV 244
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+LDMGLL+AGT++RG+FEER+K +MEEI+ + IIL IDE+HTLIG G EG +DAANIL
Sbjct: 245 SLDMGLLIAGTRFRGDFEERIKAIMEEIRAAGNIILVIDEIHTLIGTGGVEGGMDAANIL 304
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGELQC+GATTLDEYRKHIE+D ALERRFQP+ V EPSVDETI+IL GLR YE
Sbjct: 305 KPALARGELQCLGATTLDEYRKHIERDAALERRFQPIMVGEPSVDETIEILHGLRATYEQ 364
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH+++ TD AL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRLR++Q E+++EL
Sbjct: 365 HHRVKITDVALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLRNSQ-ASVTSEVKREL 423
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTE 496
Q+++ K AVR QDF+KAG+LRDRE++L+AQI A+ AE + DV PVV E
Sbjct: 424 VQVSRAKEAAVRAQDFDKAGQLRDRELELEAQIKAI---------AENQNKDVNTPVVDE 474
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI IV++WTG+PV K++ ES+ LL +E+TLH+R+IGQ EAV A+SRAIRRARVGLK+
Sbjct: 475 EDIAQIVASWTGVPVNKLTETESELLLHLEDTLHQRIIGQQEAVTAVSRAIRRARVGLKS 534
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
P+RPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGY
Sbjct: 535 PDRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 594
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI++DGRLTD+KGRTVDFKNTL
Sbjct: 595 VGYDEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIMDDGRLTDAKGRTVDFKNTL 654
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
LIMTSN+GS VIEKGG IGF++ + +SSYN I++LV E+LKQ+FRPEFLNR+D++IV
Sbjct: 655 LIMTSNIGSRVIEKGGGGIGFEIADSQSESSYNHIRNLVNEDLKQHFRPEFLNRVDDIIV 714
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
FRQL+K EV +IADI+L+EV RL + IEL+VT +F++RVV+EGYNPSYGARPLRRAIM
Sbjct: 715 FRQLSKAEVTQIADILLREVSTRLVEQGIELEVTAKFKDRVVQEGYNPSYGARPLRRAIM 774
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
RLLEDS+AE MLA IK GD+ IVD+D G V V
Sbjct: 775 RLLEDSLAEAMLAGSIKVGDTAIVDIDDRGEVKV 808
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 56/76 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT+KAIKVIML+QEE RRLGHN +G+E +LLGL+ EG GVAA+VL LG + R
Sbjct: 1 MFEYFTDKAIKVIMLSQEETRRLGHNLVGTEQILLGLIGEGTGVAAKVLTELGVSLQDAR 60
Query: 151 TQVIRMVGESTEAVGA 166
T+V +++G V A
Sbjct: 61 TEVEKIIGRGNRFVPA 76
>gi|283794929|ref|YP_003359282.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
gi|253981901|gb|ACT46818.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
Length = 817
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/750 (66%), Positives = 626/750 (83%), Gaps = 15/750 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ A EE+R LGHNYIG+EH+LLGLL + +GVA +VLE+L D ++IRT++
Sbjct: 80 FTPRAKKVLESALEESRMLGHNYIGTEHILLGLLEDEDGVATQVLESLELDLTDIRTEIF 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
R +G+ E + +GG S ++PTL+EYGT+LT+ A +GKLDPV+GR +IERV+QILG
Sbjct: 140 RFLGDQIELL---IGGAQSRGRIPTLDEYGTDLTQKAADGKLDPVIGRFKEIERVIQILG 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RR+KNNP LIGEPGVGKTA+AEGLAQRI DVPD +E KKV+TLD+GLLVAGTKYRGEF
Sbjct: 197 RRSKNNPILIGEPGVGKTAVAEGLAQRIVYKDVPDILEDKKVVTLDIGLLVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLK++++EIK ++ +IL IDEVHTLIGAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 257 EERLKRVIDEIKATNNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEMQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+E+RKHIEKDPALERRFQPV V EPSV +T++IL GLR++YE HHKL +DEA+ +AA
Sbjct: 317 EEFRKHIEKDPALERRFQPVIVNEPSVTQTVEILFGLRDKYEKHHKLVISDEAISAAATF 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ QYI+DRFLPDKAIDL+DEAGSRVRL H+Q+P A+EL+KELR+I +K++ VR +DF
Sbjct: 377 ADQYIADRFLPDKAIDLLDEAGSRVRLLHSQIPPAAKELDKELREILTQKDDFVRMEDFH 436
Query: 455 KAGELRDREMDLKAQISALV--DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
A LRDRE +++AQ++A++ +KG+ + E VVTE DI IV++WTGIPV+
Sbjct: 437 SAANLRDRETEIRAQMAAVIQANKGEWVPAPEIS------VVTEEDIAQIVASWTGIPVQ 490
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ E+++LL+MEETLH R+IGQDEAV A+++AI+RARVG+KNPNRPIASFIFSGPTGV
Sbjct: 491 KMTRTETEKLLQMEETLHSRIIGQDEAVTAVAKAIKRARVGMKNPNRPIASFIFSGPTGV 550
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+EL KALA+Y+FGSEEAM+RLDMSE+ME+HT SKLIGSPPGY+GY+EGGQLTEAVRRR
Sbjct: 551 GKTELTKALASYFFGSEEAMVRLDMSEYMEKHTTSKLIGSPPGYIGYSEGGQLTEAVRRR 610
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PYTVVLFDEIEK HPD+FN++LQILEDGRLTDSKGRT+DFKNTLLI+TSNVGS ++K
Sbjct: 611 PYTVVLFDEIEKGHPDIFNLLLQILEDGRLTDSKGRTIDFKNTLLILTSNVGSKSVQKMN 670
Query: 693 RRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
G D+ E +++ Y ++K+LV +ELK+YFRPEFLNRLDE+IVFRQLTK EV IADI
Sbjct: 671 ---GLGFDHKETREAYYAKVKTLVNDELKEYFRPEFLNRLDEIIVFRQLTKNEVGRIADI 727
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
MLKEVF+R+ K I+L+VT RF++ ++ EGYNP YGARPLRRA+MRLLED+++E+ LA +
Sbjct: 728 MLKEVFNRISAKGIQLKVTSRFKDHLINEGYNPVYGARPLRRAVMRLLEDTLSEEYLAGK 787
Query: 812 IKEGDSVIVDVDSDGNVTVLNGSSGAPESL 841
+KEGD+ I+D D G V VL G +L
Sbjct: 788 VKEGDTAIMDTDRHGKVHVLTTGKGKTAAL 817
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 9/88 (10%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+RFTEK+IKVIMLAQEEARR+ HN++G+E LLLG++ EG GVAA+VL+++G + R
Sbjct: 1 MFDRFTEKSIKVIMLAQEEARRMNHNFVGTEQLLLGIIVEGTGVAAKVLKSMGITIKDAR 60
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNKMP 178
+V ++VG G G S +P
Sbjct: 61 AEVEKLVGR---------GAGMSAVDIP 79
>gi|427740130|ref|YP_007059674.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427375171|gb|AFY59127.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 852
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/751 (67%), Positives = 620/751 (82%), Gaps = 14/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + +EAR LGHNYIG+EHLLLGL GEGVAA+VL+
Sbjct: 103 GRGSGFVPPEI--PFTPKVKTLFEQSFKEARSLGHNYIGTEHLLLGLTEAGEGVAAKVLQ 160
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NL D +RT VIR +GE GG + N+M TLEE+G NLTKLA EGKLDPVV
Sbjct: 161 NLDVDLKQLRTAVIRRLGEVASVGAGVGGGSTRRNQMATLEEFGRNLTKLAAEGKLDPVV 220
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IER VQ+LGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD ++ K+VI+LD
Sbjct: 221 GREKEIERTVQVLGRRTKNNPVLIGEPGVGKTAIAEGLAQRIFNNDVPDILQEKQVISLD 280
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGL+VAGT++RG+FEERLKK+MEEI+ + I+L IDE+HTL+GAG EG +DAANILKP+
Sbjct: 281 MGLVVAGTRFRGDFEERLKKIMEEIRSAGNIVLVIDEIHTLVGAGGMEGGMDAANILKPA 340
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQP+K+ EPSVDETI+IL+GLR YE HH
Sbjct: 341 LARGELQCIGATTLDEYRKHIERDAALERRFQPIKIGEPSVDETIEILQGLRGAYEQHHN 400
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEALV+A+QLS +YI DRFLPDKAIDLIDEAGSRVRLRH+ + R+L++++ +
Sbjct: 401 LTISDEALVAASQLSDRYIQDRFLPDKAIDLIDEAGSRVRLRHS-MASNDRDLKRQITAV 459
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEKNEAV+ QDF+KA ELRD+EM+L+ Q+ + G+++++A VV E DI
Sbjct: 460 AKEKNEAVKLQDFDKASELRDKEMELEVQLKD-AESGEQINRA---------VVGEEDIA 509
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES+ LL +E+TLH+R+IGQ++AV A+S+AIRRARVGLKNPNRP
Sbjct: 510 QIVASWTGVPVNKLTESESEVLLHLEDTLHQRLIGQEQAVTAVSKAIRRARVGLKNPNRP 569
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAK+LA+Y+FGSEE MIRLDMSEFMERHTVSKLIGSPPG+VGY
Sbjct: 570 IASFIFSGPTGVGKTELAKSLASYFFGSEENMIRLDMSEFMERHTVSKLIGSPPGFVGYE 629
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRR+PYTV+LFDEIEKAHPD+FNM+LQ+L+DG LTD+KGR VDFKNTL+I+T
Sbjct: 630 EGGQLTEAVRRKPYTVLLFDEIEKAHPDIFNMLLQMLDDGHLTDAKGRKVDFKNTLIILT 689
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+L+ DE +++YNRIK+LV EELK YFRPEFLNRLDE+IVF QL
Sbjct: 690 SNIGSRVIEKGGGGLGFNLE-DEAEANYNRIKTLVNEELKNYFRPEFLNRLDEIIVFTQL 748
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K E+KEIA+I+LKEV RL K+I LQ++E F++ VV+EGY+PSYGARPLRRAIM LLE
Sbjct: 749 QKDEIKEIAEILLKEVSSRLAEKEISLQISESFKDLVVQEGYDPSYGARPLRRAIMNLLE 808
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
DS+AE ML+ +I GD+ ++DVD DG V V+
Sbjct: 809 DSLAEAMLSGQITAGDTALIDVDDDGKVQVI 839
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKV+MLAQEEARRLGHN++G+E +LLGLL E GVAA+VL ++G + R
Sbjct: 36 MFEHFTSEAIKVVMLAQEEARRLGHNFVGTEQILLGLLGEETGVAAKVLTDMGVTLRDAR 95
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 96 REVEKIIG 103
>gi|428300697|ref|YP_007139003.1| ATPase [Calothrix sp. PCC 6303]
gi|428237241|gb|AFZ03031.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 817
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/759 (67%), Positives = 624/759 (82%), Gaps = 21/759 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + A +EAR LG+NYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQAFKEARSLGNNYISTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKL 196
NLG D S +RT VIR +G+ AV G G S G + LEE+G NLTKLA+EGKL
Sbjct: 126 NLGIDLSEVRTAVIRRLGDDV-AVAPGAGASSGGQRRNQQSLMLEEFGKNLTKLAQEGKL 184
Query: 197 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKV 256
DPVVGR +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + GK+V
Sbjct: 185 DPVVGRANEIERAVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPEILLGKQV 244
Query: 257 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANI 316
++LDMGL+VAGT++RG+FEERLKK+MEEI+ IIL IDE+HTL+GAG EG +DAANI
Sbjct: 245 VSLDMGLMVAGTRFRGDFEERLKKVMEEIRTEGNIILVIDEIHTLVGAGGVEGGMDAANI 304
Query: 317 LKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYE 376
+KP+LARGELQC+GATTL+EYR +IE+D ALERRFQP+ V EPSV+ETI IL+GLR YE
Sbjct: 305 MKPALARGELQCLGATTLNEYR-NIERDAALERRFQPILVGEPSVEETIHILQGLRSVYE 363
Query: 377 IHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKE 436
HH++ TDEAL +AA+LS +YISDRFLPDKAIDLIDEAGSRVRLR++Q+ + +REL+++
Sbjct: 364 QHHRVTITDEALQAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRNSQISQ-SRELKRQ 422
Query: 437 LRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTE 496
LR ++KEK+EAVR QDFEKAG+LRD+E++L+ QI +AE+ + P+V E
Sbjct: 423 LRSLSKEKDEAVRVQDFEKAGQLRDKEIELEGQI-----------QAESSDYNNNPIVNE 471
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI IV++WTG+PV K++ ES+ L+ +E+TLH+R+IGQ++AV A+SRA+RRARVGLKN
Sbjct: 472 EDIAQIVASWTGVPVNKLTESESEMLMHLEDTLHQRLIGQEQAVTAVSRAVRRARVGLKN 531
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
PNRPIASFIFSGPTGVGK+ELAK+LAAY+FG+E+AMIRLDMSEFMERHTVSKLIGSPPGY
Sbjct: 532 PNRPIASFIFSGPTGVGKTELAKSLAAYFFGAEDAMIRLDMSEFMERHTVSKLIGSPPGY 591
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY EGGQLTEAVRR+PYTV+LFDEIEKAHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL
Sbjct: 592 VGYEEGGQLTEAVRRKPYTVILFDEIEKAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTL 651
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
+I+TSN+GS VIEKGG IGF D D ++SYNRIK+LV EELK +FRPEFLNRLD++IV
Sbjct: 652 IILTSNIGSKVIEKGGGGIGFQFD-DASEASYNRIKTLVNEELKNFFRPEFLNRLDDIIV 710
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
F QL K EVK+IA+IML +V RLK + I LQV++RF+ERVV+EGY+PSYGARPLRRAIM
Sbjct: 711 FTQLNKDEVKQIAEIMLLDVGSRLKERGIILQVSDRFKERVVQEGYDPSYGARPLRRAIM 770
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
RLLEDS+AE ML+ +I +GD+ ++DVD DG V V+ S
Sbjct: 771 RLLEDSLAEAMLSGQIVDGDTALIDVDDDGKVKVIKSES 809
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AI+VIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL +LG + R
Sbjct: 1 MFEHFTSQAIRVIMLAQEEARRLGHNFVGTEQILLGLIGEGNGVAAKVLVDLGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|75910545|ref|YP_324841.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75704270|gb|ABA23946.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 814
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/751 (67%), Positives = 616/751 (82%), Gaps = 19/751 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LG+NYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHNLGNNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGES-TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D ++R+ VIR +GE T VG GGGS N+ PT+EE+G NLTKLA+EGKLDPV
Sbjct: 126 NLGVDLKSVRSAVIRRLGEDPTVVVG---GGGSRRNQTPTIEEFGRNLTKLAKEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD ++ K+VI+L
Sbjct: 183 VGRQKEIERAVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPDILQDKQVISL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMG LVAGT++RG+FEER+KK++EE++ + IIL IDE+HTL+GAG EG +DAANILKP
Sbjct: 243 DMGSLVAGTRFRGDFEERIKKIVEEVRSAGNIILVIDEIHTLVGAGGTEGGLDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYR+HIE+D ALERRFQP+ V EPSV ETI IL GLR YE HH
Sbjct: 303 ALARGELQCIGATTLDEYRQHIERDAALERRFQPIMVGEPSVAETIDILYGLRGAYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
K+ +DEA+V+AAQL+ +YISDRFLPDKAIDLIDEAGSRVRLR++Q+ +EL+++L
Sbjct: 363 KVHISDEAVVAAAQLADRYISDRFLPDKAIDLIDEAGSRVRLRNSQISPN-KELKRQLTD 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
ITK KNEAVR QDF+KA +LRD E+ L+ ++ +A T + PVV E DI
Sbjct: 422 ITKSKNEAVRVQDFDKAAKLRDEEIALETEL-----------QAATTGQTIKPVVDEEDI 470
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV ++SRAIRRARVGLK+PNR
Sbjct: 471 AQIVASWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVTSVSRAIRRARVGLKSPNR 530
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAKALAAY+FG+E+AMIRLDMSE+ME HTVSKLIGSPPGYVGY
Sbjct: 531 PIASFIFSGPTGVGKTELAKALAAYFFGAEDAMIRLDMSEYMESHTVSKLIGSPPGYVGY 590
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQIL+DG +TD+KGR VDFKNTL+I+
Sbjct: 591 DEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQILDDGHITDAKGRKVDFKNTLIIL 650
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ D ++ ++SYNRI++LV EELK YFRPEFLNRLDE+IVF Q
Sbjct: 651 TSNIGSKVIEKGGGGLGFEFD-NQAEASYNRIRNLVNEELKNYFRPEFLNRLDEVIVFTQ 709
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L++ EVK+IADIML++V RL K I L+VTERF+E VV EGYNPSYGARPLRRAIMRLL
Sbjct: 710 LSRDEVKQIADIMLRDVASRLTEKGITLEVTERFKELVVTEGYNPSYGARPLRRAIMRLL 769
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE +L+ EI EGD+ I DV+ DG V +
Sbjct: 770 EDSLAEVLLSGEITEGDTAIADVNDDGQVQI 800
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL +G + R
Sbjct: 1 MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTEMGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|427728669|ref|YP_007074906.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427364588|gb|AFY47309.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 815
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/752 (68%), Positives = 620/752 (82%), Gaps = 20/752 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHSLGHNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS--GNKMPTLEEYGTNLTKLAEEGKLDP 198
NLG D N+R+ VIR +GE V VGGGS G + T EE+G NLTKLA+EGKLDP
Sbjct: 126 NLGVDLRNVRSAVIRRLGEDPTVV---VGGGSPRRGQTLTT-EEFGRNLTKLAQEGKLDP 181
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
VVGRQ +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ +EGK+VI+
Sbjct: 182 VVGRQKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPEVLEGKQVIS 241
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LDMGLLVAGT++RG+FEER+KK+++E++ + IIL IDE+HTL+GAG EG +DAANILK
Sbjct: 242 LDMGLLVAGTRFRGDFEERIKKIVDEVRTAGNIILVIDEIHTLVGAGGTEGGLDAANILK 301
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P+LARGELQCIGATTLDEYR+HIE+D ALERRFQP+ V EPSV+ETI+IL GLR YE H
Sbjct: 302 PALARGELQCIGATTLDEYRQHIERDAALERRFQPILVGEPSVEETIEILYGLRGVYEQH 361
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
HK++ +DEA+V+AA+LS +YISDRFLPDKAIDLIDEAGSRVRLR++ + + +EL+++L
Sbjct: 362 HKVQISDEAVVAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRNSHISTD-KELKRKLA 420
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD 498
Q+TK KNEAVR Q+F++AGELRD+E+ L+ ++ A A E VV E D
Sbjct: 421 QVTKAKNEAVRLQNFDQAGELRDQEIALETELQA----------ASVEKVIYPIVVDEED 470
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
I IV++WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV A+SRAIRRARVGLKNPN
Sbjct: 471 IAQIVASWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVTAVSRAIRRARVGLKNPN 530
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPIASFIFSGPTGVGK+ELAKALAAY+FG+E+AMIRLDMSE+ME HTVSKLIGSPPGYVG
Sbjct: 531 RPIASFIFSGPTGVGKTELAKALAAYFFGAEDAMIRLDMSEYMESHTVSKLIGSPPGYVG 590
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
Y EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I
Sbjct: 591 YDEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLII 650
Query: 679 MTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR 738
+TSN+GS VIEKGG +GF+ D ++ ++SY+RI++LV EELK YFRPEFLNR+DE+IVF
Sbjct: 651 LTSNIGSKVIEKGGGGLGFEFD-NQPEASYHRIRNLVNEELKNYFRPEFLNRVDEIIVFT 709
Query: 739 QLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRL 798
QL+K EVK+IADIML+EV RL K I L+VTERF++ VV EGYNPSYGARPLRRAIMRL
Sbjct: 710 QLSKDEVKQIADIMLREVASRLTEKGIILEVTERFKDLVVTEGYNPSYGARPLRRAIMRL 769
Query: 799 LEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
LEDS+AE MLA E++EG + IVDV+ DG V V
Sbjct: 770 LEDSLAEAMLAGELREGCTAIVDVNDDGQVQV 801
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG + R
Sbjct: 1 MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTELGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|423062414|ref|ZP_17051204.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
gi|406716322|gb|EKD11473.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
Length = 824
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/753 (67%), Positives = 621/753 (82%), Gaps = 11/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GF+ + FT +A +V A +EAR+LG+NYI EH+LLGLL++ EGVAA+VLE
Sbjct: 68 GRGSGFMPPEI--PFTPRAKRVFESAMKEARQLGNNYIAPEHILLGLLQDEEGVAAKVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
N G + +RT++I+ +GE A AG S K TL+E+ TNLT+LA +GKLDP+V
Sbjct: 126 NFGIERRQLRTELIKNLGEEVPA-SAGGNSRSQSRKTATLDEFSTNLTQLAAQGKLDPIV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ +E ++V++L+
Sbjct: 185 GRDREIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGNVPELLENRQVVSLE 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MG LVAGT++RGEFEERLKK+++EIK + IIL IDE+HTL+GAGA EG +DAAN+LKP+
Sbjct: 245 MGTLVAGTRFRGEFEERLKKIVQEIKANGNIILLIDEIHTLVGAGAIEGTMDAANMLKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRK+IE+D ALERRFQPV V EPSV+ETI+IL GLR YE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKYIERDAALERRFQPVMVGEPSVEETIEILFGLRSAYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEA+++AA+LS++YISDRFLPDKAIDLIDEAGSRVR+ H++LP E R+L+ EL I
Sbjct: 365 LTISDEAVLAAAKLSHRYISDRFLPDKAIDLIDEAGSRVRVMHSKLPPEVRDLKVELSDI 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K+ AV+ QDF+KAGELRDRE+ K QI A S+ ET +VTE DI
Sbjct: 425 VKQKDVAVQVQDFDKAGELRDRELKCKDQIEA-------ASQVETSI-KTNLIVTEEDIA 476
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
++SAWTGIPV K++ ES +L+ ME+TLH+R+IGQ EAV A+SRAIRRARVGLKNPNRP
Sbjct: 477 DVLSAWTGIPVTKMTESESYKLMHMEDTLHQRLIGQHEAVSAVSRAIRRARVGLKNPNRP 536
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGS EAMIRLDMSEFMERHTVSKLIGSPPG+VGY
Sbjct: 537 IASFIFSGPTGVGKTELTKALAYYFFGSMEAMIRLDMSEFMERHTVSKLIGSPPGFVGYD 596
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTV FKNTL+IMT
Sbjct: 597 EGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVSFKNTLIIMT 656
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ + ++++ Y RI++LV EELKQYFRPEF+NRLDE+IVFR+L
Sbjct: 657 SNIGSKVIEKGGGGLGFEFEQSQEEAQYTRIRNLVNEELKQYFRPEFINRLDEIIVFRKL 716
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVK+IADI+L+EVF RL+ K+I L+V++RF++ +VE GY+P+YGARPLRRAIM LLE
Sbjct: 717 TKDEVKQIADILLEEVFARLRDKEIVLEVSDRFKDHIVEVGYDPNYGARPLRRAIMNLLE 776
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
D +AE ML+ +K GD +VD+D DG V VL G
Sbjct: 777 DVLAETMLSGTLKPGDQALVDLDDDGQVKVLTG 809
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F++KAIK +ML+QEEARRLGHN++G+E LLLG++ EG +AA+VL + + N R
Sbjct: 1 MFEYFSDKAIKAVMLSQEEARRLGHNFVGTEQLLLGIIGEGTSIAAKVLSDQNLNLDNTR 60
Query: 151 TQVIRMVG 158
++ ++G
Sbjct: 61 REIESIIG 68
>gi|17229455|ref|NP_486003.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17131053|dbj|BAB73662.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 814
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/751 (67%), Positives = 614/751 (81%), Gaps = 19/751 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LG+NYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHNLGNNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGES-TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D ++R+ VIR +GE T VG GGGS N+ P +EE+G NLTKLA+EGKLDPV
Sbjct: 126 NLGVDLKSVRSAVIRRLGEDPTVVVG---GGGSRRNQTPMMEEFGRNLTKLAKEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGRQ +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD ++ K+V++L
Sbjct: 183 VGRQKEIERTVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPDILQDKQVVSL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMG LVAGT++RG+FEER+KK++EE++ + IIL IDE+HTL+GAG EG +DAANILKP
Sbjct: 243 DMGSLVAGTRFRGDFEERIKKIVEEVRSAGNIILVIDEIHTLVGAGGTEGGLDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYR++IE+D ALERRFQP+ V EPSV ETI IL GLR YE HH
Sbjct: 303 ALARGELQCIGATTLDEYRQYIERDAALERRFQPIMVGEPSVAETIDILYGLRGAYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
K+ +DEA+V+AAQL+ +YISDRFLPDKAIDLIDEAGSRVRLR++Q+ +EL+++L
Sbjct: 363 KVHISDEAVVAAAQLADRYISDRFLPDKAIDLIDEAGSRVRLRNSQISPN-KELKRQLTD 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
ITK KNEAVR QDF+KA +LRD E+ L+ ++ +A T + PVV E DI
Sbjct: 422 ITKSKNEAVRLQDFDKAAKLRDEEIALETEL-----------QAATTGQTIKPVVDEEDI 470
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV ++SRAIRRARVGLK+PNR
Sbjct: 471 AQIVASWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVTSVSRAIRRARVGLKSPNR 530
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAKALAAY+FG+E+AMIR DMSE+ME HTVSKLIGSPPGYVGY
Sbjct: 531 PIASFIFSGPTGVGKTELAKALAAYFFGAEDAMIRFDMSEYMESHTVSKLIGSPPGYVGY 590
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL+I+
Sbjct: 591 DEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIIL 650
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ D ++ ++SYNRI++LV EELK YFRPEFLNRLDE+IVF Q
Sbjct: 651 TSNIGSKVIEKGGGGLGFEFD-NQAEASYNRIRNLVNEELKNYFRPEFLNRLDEVIVFTQ 709
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L++ EVK+IADIML++V RL K I L+VTERF+E VV EGYNPSYGARPLRRAIMRLL
Sbjct: 710 LSRDEVKQIADIMLRDVASRLTEKGITLEVTERFKELVVTEGYNPSYGARPLRRAIMRLL 769
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE +L+ EI EGD+ I DV+ DG V +
Sbjct: 770 EDSLAEVLLSGEITEGDTAIADVNDDGQVQI 800
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL +G + R
Sbjct: 1 MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTEMGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|409991063|ref|ZP_11274359.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567331|dbj|BAI89603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409938081|gb|EKN79449.1| ATPase [Arthrospira platensis str. Paraca]
Length = 824
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/753 (67%), Positives = 623/753 (82%), Gaps = 11/753 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GF+ + FT +A +V A +EAR+LG+NYI EH+LLGLL++ EGVAA+VLE
Sbjct: 68 GRGSGFMPPEI--PFTPRAKRVFEAAMKEARQLGNNYIAPEHILLGLLQDEEGVAAKVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG + +RT++I+ +GE A AG SSG K TL+E+ TNLT+LA +GKLDP+V
Sbjct: 126 NLGIERRQLRTELIKNLGEEVPA-SAGGTSRSSGRKTATLDEFSTNLTQLAAQGKLDPIV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ +E ++V++L+
Sbjct: 185 GRDREIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGNVPELLENRQVVSLE 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MG LVAGT++RGEFEERLKK+++EIK S IIL IDE+HTL+GAGA EG +DAAN+LKP+
Sbjct: 245 MGTLVAGTRFRGEFEERLKKIVQEIKASGNIILLIDEIHTLVGAGAIEGTMDAANMLKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRK+IE+D ALERRFQPV V EPSV+ETI+IL GLR YE HH+
Sbjct: 305 LARGELQCIGATTLDEYRKYIERDAALERRFQPVMVGEPSVEETIEILFGLRSAYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +DEA+++AA+LS++YISDRFLPDKAIDLIDEAGSRVR+ H++LP E R+L+ EL I
Sbjct: 365 LTISDEAVLAAAKLSHRYISDRFLPDKAIDLIDEAGSRVRVMHSKLPPEVRDLKVELSDI 424
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
K+K+ AV+ QDFEKAGELRDRE+ K QI A S+ ET +VTE DI
Sbjct: 425 VKQKDAAVQAQDFEKAGELRDRELQCKDQIEA-------ASQVETSI-KTNLIVTEEDIA 476
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
++SAWTGIPV K++ ES +L+ ME+TLH+R+IGQ EAV A+SRAIRRARVGLKNPNRP
Sbjct: 477 DVLSAWTGIPVTKMTESESYKLMHMEDTLHQRLIGQHEAVSAVSRAIRRARVGLKNPNRP 536
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+EL KALA Y+FGS EAMIRLDMSEFMERHTVSKLIGSPPG+VGY
Sbjct: 537 IASFIFSGPTGVGKTELTKALAYYFFGSVEAMIRLDMSEFMERHTVSKLIGSPPGFVGYD 596
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTV FKNTL+IMT
Sbjct: 597 EGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVSFKNTLIIMT 656
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ + +D+ Y RI++LV EELKQYFRPEF+NRLDE+IVFR+L
Sbjct: 657 SNIGSKVIEKGGGGLGFEFEESPEDAQYTRIRNLVNEELKQYFRPEFINRLDEIIVFRKL 716
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK EVK+IADI+L+EVF RL+ K+I L+V++RF++ +VE GY+P+YGARPLRRAIM LLE
Sbjct: 717 TKDEVKQIADILLEEVFARLRDKEIVLEVSDRFKDHIVEVGYDPNYGARPLRRAIMNLLE 776
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
D +AE ML+ +K GD +VD+D DG V V+ G
Sbjct: 777 DVLAETMLSGTLKPGDQALVDLDDDGQVKVITG 809
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F++KAIK +ML+QEEARRLGHN++G+E LLLG++ EG +AA+VL + + N R
Sbjct: 1 MFEYFSDKAIKAVMLSQEEARRLGHNFVGTEQLLLGIIGEGTSIAAKVLSDQNLNLDNTR 60
Query: 151 TQVIRMVG 158
++ ++G
Sbjct: 61 REIESIIG 68
>gi|209522992|ref|ZP_03271549.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
gi|209496579|gb|EDZ96877.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
Length = 824
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/739 (67%), Positives = 615/739 (83%), Gaps = 9/739 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V A +EAR+LG+NYI EH+LLGLL++ EGVAA+VLEN G + +RT++I
Sbjct: 80 FTPRAKRVFESAMKEARQLGNNYIAPEHILLGLLQDEEGVAAKVLENFGIERRQLRTELI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ +GE A AG S K TL+E+ TNLT+LA +GKLDP+VGR +IERV+QILG
Sbjct: 140 KNLGEEVPA-SAGGNSRSQSRKTATLDEFSTNLTQLAAQGKLDPIVGRDREIERVIQILG 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ +E ++V++L+MG LVAGT++RGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQRIINGNVPELLENRQVVSLEMGTLVAGTRFRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK+++EIK + IIL IDE+HTL+GAGA EG +DAAN+LKP+LARGELQCIGATTL
Sbjct: 259 EERLKKIVQEIKANGNIILLIDEIHTLVGAGAIEGTMDAANMLKPALARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IE+D ALERRFQPV V EPSV+ETI+IL GLR YE HH+L +DEA+++AA+L
Sbjct: 319 DEYRKYIERDAALERRFQPVMVGEPSVEETIEILFGLRSAYEQHHRLTISDEAVLAAAKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YISDRFLPDKAIDLIDEAGSRVR+ H++LP E R+L+ EL I K+K+ AV+ QDF+
Sbjct: 379 SHRYISDRFLPDKAIDLIDEAGSRVRVMHSKLPPEVRDLKVELSDIVKQKDVAVQVQDFD 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KAGELRDRE+ K QI A S+ ET +VTE DI ++SAWTGIPV K+
Sbjct: 439 KAGELRDRELKCKDQIEA-------ASQVETSI-KTNLIVTEEDIADVLSAWTGIPVTKM 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES +L+ ME+TLH+R+IGQ EAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK
Sbjct: 491 TESESYKLMHMEDTLHQRLIGQHEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA Y+FGS EAMIRLDMSEFMERHTVSKLIGSPPG+VGY EGGQLTEAVRRRPY
Sbjct: 551 TELTKALAYYFFGSMEAMIRLDMSEFMERHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
TV+LFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTV FKNTL+IMTSN+GS VIEKGG
Sbjct: 611 TVILFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVSFKNTLIIMTSNIGSKVIEKGGGG 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF+ + ++++ Y RI++LV EELKQYFRPEF+NRLDE+IVFR+LTK EVK+IADI+L+
Sbjct: 671 LGFEFEQSQEEAQYTRIRNLVNEELKQYFRPEFINRLDEIIVFRKLTKDEVKQIADILLE 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
EVF RL+ K+I L+V++RF++ +VE GY+P+YGARPLRRAIM LLED +AE ML+ +K
Sbjct: 731 EVFARLRDKEIVLEVSDRFKDHIVEVGYDPNYGARPLRRAIMNLLEDVLAETMLSGTLKP 790
Query: 815 GDSVIVDVDSDGNVTVLNG 833
GD +VD+D DG V VL G
Sbjct: 791 GDQALVDLDDDGQVKVLTG 809
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F++KAIK +ML+QEEARRLGHN++G+E LLLG++ EG +AA+VL + + N R
Sbjct: 1 MFEYFSDKAIKAVMLSQEEARRLGHNFVGTEQLLLGIIGEGTSIAAKVLSDQNLNLDNTR 60
Query: 151 TQVIRMVG 158
++ ++G
Sbjct: 61 REIESIIG 68
>gi|428309114|ref|YP_007120091.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428250726|gb|AFZ16685.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 827
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/742 (66%), Positives = 614/742 (82%), Gaps = 10/742 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT KA ++ + +EAR+LGHNYIG+EHLLL + + EGVAA+V+ENL D ++R+ VI
Sbjct: 80 FTPKAKRIFDQSFKEARQLGHNYIGTEHLLLAITHDEEGVAAKVIENLDVDLGDVRSAVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+ +GE A G S + PT LEE+G NLT+LA EGKLDPVVGR +IERV+
Sbjct: 140 KAMGEVAAAAKTRSQGSSLFGETPTKKASLEEFGRNLTQLALEGKLDPVVGRAKEIERVI 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI VPD +E K+V TLDMGLL++GT+Y
Sbjct: 200 QILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVDNHVPDLLEDKQVFTLDMGLLLSGTRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLK++MEE++QS IIL IDE+HTL+GAG+ EG +DAAN+LKP+LARGELQC+G
Sbjct: 260 RGDFEERLKQIMEEVRQSGNIILVIDEIHTLVGAGSTEGGMDAANLLKPALARGELQCLG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIE+D ALERRFQPV V EPSV++TI+IL GLR+ YE HK++ +++AL +
Sbjct: 320 ATTLDEYRKHIERDAALERRFQPVMVGEPSVEDTIEILYGLRDAYEQFHKVKISNQALEA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA+LS +YI DRFLPDKAIDLIDEAGSR+ L H+ A+EL++ELR+IT++K EAV+
Sbjct: 380 AAKLSDRYIQDRFLPDKAIDLIDEAGSRIHLIHSGPSPAAKELKQELRRITQKKEEAVKA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q+F+KA ++RDRE++L++Q+ A+++ +E + + T P VTE DI IV++WTGIP
Sbjct: 440 QNFDKASQMRDRELELESQLQAMLNNDQEQNASLT------PTVTEEDIAQIVASWTGIP 493
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ ES LL +E+TLH+R++GQ+EAV A+SRAIRRARVGLKNPNRPIASFIFSGPT
Sbjct: 494 VNKLTESESAMLLHLEDTLHQRLVGQEEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPT 553
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELAKALAAY+FGSEEAMIRLDMSEFME HTVSKLIGSPPGYVGY EGGQLTEAVR
Sbjct: 554 GVGKTELAKALAAYFFGSEEAMIRLDMSEFMESHTVSKLIGSPPGYVGYDEGGQLTEAVR 613
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+PYTV+LFDEIEKAHPDVFNM+LQ+L+DGRLTD++GRTVDFKNTL+IMTSN+GS VIEK
Sbjct: 614 RKPYTVLLFDEIEKAHPDVFNMLLQLLDDGRLTDAQGRTVDFKNTLIIMTSNIGSKVIEK 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
GG GF+ +E +S Y RI+ V E+LK YFRPEFLNRLDE+IVFRQLT+ EVK+IAD
Sbjct: 674 GGSSFGFESSGNEAESRYLRIRDKVNEDLKGYFRPEFLNRLDEIIVFRQLTRDEVKQIAD 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+ML+++ RL + I L+VT RF++R+V+EGY+PSYGARPLRRAIMRLLEDS+AE ML+
Sbjct: 734 LMLRDISIRLLEQGIALEVTGRFKDRLVDEGYDPSYGARPLRRAIMRLLEDSLAEAMLSG 793
Query: 811 EIKEGDSVIVDVDSDGNVTVLN 832
++ +GD+ ++DVD G V VL
Sbjct: 794 QVNDGDTAVIDVDDKGQVKVLQ 815
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 56/76 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++AIK IMLAQEEARRLGHN +G+E +LLGLL EG+G+A+ VL N G + R
Sbjct: 1 MFERFTDRAIKAIMLAQEEARRLGHNLVGTEQILLGLLGEGKGIASIVLNNFGITLESAR 60
Query: 151 TQVIRMVGESTEAVGA 166
+V ++G AV A
Sbjct: 61 AEVENLIGRGYRAVPA 76
>gi|428207100|ref|YP_007091453.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428009021|gb|AFY87584.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 828
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/740 (68%), Positives = 618/740 (83%), Gaps = 9/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT K +V A EAR LGHNYIG EH+LLGLL+EGEGVA +VL+NLG D R I
Sbjct: 80 FTPKVKRVFEQAFTEARTLGHNYIGPEHVLLGLLQEGEGVAGKVLQNLGVDLDEARGNTI 139
Query: 155 RMVGESTEAVGAGVGG----GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
R +GE AG G G++ +K TL+E+GTNLTKLA EGKLDPVVGR+ +++R V
Sbjct: 140 RKLGEVATVASAGRQGRKGFGTAPSKTSTLDEFGTNLTKLAAEGKLDPVVGREKEVQRAV 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA+ DVPDT+ K++ +LDMG LVAGT+Y
Sbjct: 200 QILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDVPDTLIDKQLYSLDMGSLVAGTRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEER+K +++E++ + +ILFIDE+HTLIG G EG IDAAN+LKP+LARGELQC+G
Sbjct: 260 RGDFEERIKSVLDEVRSNSSVILFIDEIHTLIGVGGVEGGIDAANMLKPALARGELQCMG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIE+D ALERRFQPV V EPSV ETI+IL GLR+RYE HHK++ +D AL +
Sbjct: 320 ATTLDEYRKHIERDAALERRFQPVMVDEPSVVETIEILFGLRDRYEQHHKVKMSDLALAA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AAQLS +YISDRFLPDKAIDLIDEAGSRVR R+++ E + L++EL Q+TKEK AV
Sbjct: 380 AAQLSDRYISDRFLPDKAIDLIDEAGSRVRFRNSKQSPETQALKQELVQVTKEKEAAVSA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
QDF+ AG+LRDRE++++ Q+ A+ D K+ E E V PVV E DI IV++WTG+P
Sbjct: 440 QDFDNAGKLRDRELEIEQQLKAIADNRKQ----EIENASV-PVVDEEDIAQIVASWTGVP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ ES+ LL +E+TLH+R+IGQ+EAV A+S+AIRRARVGLKNP+RPIASFIFSGPT
Sbjct: 495 VSKLTESESELLLHLEDTLHQRLIGQEEAVTAVSKAIRRARVGLKNPDRPIASFIFSGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELAK+LAAY+FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY EGGQLTEAVR
Sbjct: 555 GVGKTELAKSLAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYDEGGQLTEAVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+PYTV+LFDEIEKAHPDVFNM+LQI++DGRLTD+KGRTVDFKNTL+I+TSN+GS VIEK
Sbjct: 615 RKPYTVLLFDEIEKAHPDVFNMLLQIMDDGRLTDAKGRTVDFKNTLIILTSNIGSRVIEK 674
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
GG IGF+L D D+ Y+R+++LV EELKQ+FRPEFLNRLDE+IVFRQL K EVK+IAD
Sbjct: 675 GGGGIGFELGGDRADAQYDRVRNLVQEELKQHFRPEFLNRLDEIIVFRQLNKNEVKQIAD 734
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IML+E+ +RL + I L+VTERF+++VV+EGYNPSYGARPLRRA+MRLLEDS+AE ML+
Sbjct: 735 IMLQEISNRLTERSITLKVTERFKDKVVDEGYNPSYGARPLRRAMMRLLEDSLAEAMLSG 794
Query: 811 EIKEGDSVIVDVDSDGNVTV 830
I +GD+ +VDVD+DG V V
Sbjct: 795 RINDGDTALVDVDADGQVQV 814
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT+KAIK +MLAQEEARRLGHN +G+E +LLGL+ EG G+AA+VL LG R
Sbjct: 1 MFEHFTDKAIKAVMLAQEEARRLGHNLVGTEQILLGLIGEGTGIAAKVLTELGVTLQAAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 AEVEKIIG 68
>gi|440684474|ref|YP_007159269.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428681593|gb|AFZ60359.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 832
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/750 (66%), Positives = 609/750 (81%), Gaps = 16/750 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 87 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHSLGHNYINTEHLLLGLTESGEGVAAKVLQ 144
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D +R+ VI +G+ AV AG G NK ++EE+G NLTKLA+EGKLDPVV
Sbjct: 145 NLGVDLHAVRSAVISRLGDDV-AVLAG-GNSPKRNKNLSIEEFGRNLTKLAQEGKLDPVV 202
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LD
Sbjct: 203 GRQKEIERTVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPEVLLNKQVISLD 262
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MG +VAGT++RG+FEERLKK+MEE++ IIL IDE+HTL+GAG EG +DAANILKP+
Sbjct: 263 MGSVVAGTRFRGDFEERLKKIMEEVRSEGNIILVIDEIHTLVGAGGTEGGLDAANILKPA 322
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQP+ V EPS++ETIQIL GLR YE HHK
Sbjct: 323 LARGELQCIGATTLDEYRKHIERDAALERRFQPILVGEPSIEETIQILYGLRGAYEQHHK 382
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+ +D A+V+AA+LS +YISDRFLPDKAIDLIDEAGSRVRLR+++ + +EL++EL +
Sbjct: 383 VHISDAAVVAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRNSRTATD-KELKRELVGV 441
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK K EAVR Q+F+KAG+LRD+E++++ + + ETE P+V E DI
Sbjct: 442 TKSKEEAVRLQNFDKAGKLRDQEVEIQGR----------LYTEETEKNAKTPIVDEEDIA 491
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV +++RAIRRARVGLKNPNRP
Sbjct: 492 QIVASWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVTSVARAIRRARVGLKNPNRP 551
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAK+LAAY+FG+E AMIRLDMSE+ME H VSKLIGSPPGYVGY
Sbjct: 552 IASFIFSGPTGVGKTELAKSLAAYFFGAESAMIRLDMSEYMESHNVSKLIGSPPGYVGYD 611
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRR+PYTVVLFDEIEKAHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL+I+T
Sbjct: 612 EGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIILT 671
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVGS VIEKGG +GF+ D ++ D+SY+RI++LV EELK YFRPEFLNRLD++IVF QL
Sbjct: 672 SNVGSKVIEKGGMSLGFEFD-NQADASYHRIRNLVNEELKAYFRPEFLNRLDDIIVFTQL 730
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVK+IA+IML +V RL + I+L+VTE F++RVV EGY+PSYGARPLRRAIMRLLE
Sbjct: 731 NKAEVKQIAEIMLVDVASRLTERRIKLEVTESFKDRVVTEGYDPSYGARPLRRAIMRLLE 790
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE +LA +I EGD+ IVD+D DG V V
Sbjct: 791 DSLAEALLAGQIGEGDTAIVDIDDDGQVIV 820
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMFE FT +AI+VIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG +
Sbjct: 19 AMFEHFTSEAIRVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKDA 78
Query: 150 RTQVIRMVGEST 161
R +V +++G +
Sbjct: 79 RREVEKIIGRGS 90
>gi|119511432|ref|ZP_01630543.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
gi|119463897|gb|EAW44823.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
Length = 817
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/750 (66%), Positives = 607/750 (80%), Gaps = 14/750 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREANSLGHNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D N+RT VIR +GE V A G S ++ TLEE+G NLTKLA+EGKLDPVV
Sbjct: 126 NLGVDLKNVRTNVIRRLGEGG-TVFASTGSSSKRSQSVTLEEFGRNLTKLAQEGKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + D P+ + K+VI+LD
Sbjct: 185 GRAKEIERTIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDAPEILLDKQVISLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MG++V+GT++RG+FEERLKK++EE++ + IIL IDEVHTL+GAG EG +DAANILKP+
Sbjct: 245 MGMVVSGTRFRGDFEERLKKIVEEVRSAGNIILVIDEVHTLVGAGGTEGGLDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYR+HIE+D ALERRFQ + + EPSV+ET++IL GLR YE HHK
Sbjct: 305 LARGELQCIGATTLNEYRQHIERDAALERRFQSILIGEPSVEETVEILYGLRGAYEQHHK 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+ +D+A+++AA+LS +YISDRFLPDKAIDLIDEAGSRVRLR++++ +EL+K+L +
Sbjct: 365 VHISDQAVLAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRNSRISTN-KELKKQLVGV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
+K K EAVR Q+F KAGELRD EM L+A + A +A+ E P+V E DI
Sbjct: 424 SKAKQEAVRVQNFGKAGELRDEEMKLEADLQA---------EAQNEDFVKSPIVDEEDIA 474
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES+ LL +E+TLH+R+IGQ++AV A+SRAIRRARVGLKNPNRP
Sbjct: 475 QIVASWTGVPVNKLTESESELLLHLEDTLHERLIGQEQAVTAVSRAIRRARVGLKNPNRP 534
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAK+LA+Y+F SEEAMIRLDMSE+ME HTVSKLIGSPPGYVGY
Sbjct: 535 IASFIFSGPTGVGKTELAKSLASYFFSSEEAMIRLDMSEYMEGHTVSKLIGSPPGYVGYD 594
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
+GGQLTEAVRR+PY+V+LFDEIEKAHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL+I+T
Sbjct: 595 DGGQLTEAVRRKPYSVILFDEIEKAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIILT 654
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GFD + D+SYNRI++LV EELK YFRPEFLNRLD++IVF QL
Sbjct: 655 SNIGSKVIEKGGGGLGFDFE-TAADASYNRIRTLVNEELKAYFRPEFLNRLDDIIVFTQL 713
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVK+IADIML+E+ RL K I L+VTERF+ERVVEEGYNPSYGARPLRRAIMRLLE
Sbjct: 714 AKDEVKQIADIMLREIASRLTEKGITLEVTERFKERVVEEGYNPSYGARPLRRAIMRLLE 773
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
D +AE ML+ ++ EG + I D+D D VT+
Sbjct: 774 DPLAEAMLSGQVTEGVTAIADIDDDNQVTI 803
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG R
Sbjct: 1 MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLAELGVTLKEAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|186683718|ref|YP_001866914.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186466170|gb|ACC81971.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 817
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/751 (66%), Positives = 607/751 (80%), Gaps = 16/751 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + +EA LG NYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFKEAHSLGQNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPV 199
NLG D ++R+ ++R +GE+ A G GS P T+EEYG NLTKLA+EG+LDPV
Sbjct: 126 NLGVDFKSVRSAIVRRLGENAPAFA---GSGSQKRTQPLTMEEYGRNLTKLAQEGRLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+T++ K+VI+L
Sbjct: 183 VGREKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPETLQDKQVISL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMG LVAGT++RG+FEER+KK++EE++ IIL IDE+HTL+GAG EG +DAANILKP
Sbjct: 243 DMGSLVAGTRFRGDFEERIKKVVEEVRTVGNIILVIDEIHTLVGAGGTEGGLDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTLDEYRKHIE+D ALERRFQP+ V EPSV+ET+QIL GLR YE HH
Sbjct: 303 ALARGELQCIGATTLDEYRKHIERDAALERRFQPIMVGEPSVEETVQILYGLRGAYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
K+ D ALV+AA+LS +YISDRFLPDKAIDLIDEAGSRVRLR++Q +EL++EL
Sbjct: 363 KVTILDSALVAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRNSQ-SSPNKELKRELAG 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+TKEK AVR QDF+KA LRD+E+ L Q+ A ++ + VV E DI
Sbjct: 422 VTKEKEAAVRVQDFDKAVTLRDQELKLAEQLQATFTPNEQPVNS--------TVVDEEDI 473
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES+ LL +E+TLH+R+IGQ++AV A+SR IRRARVGLKNPNR
Sbjct: 474 AQIVASWTGVPVNKLTESESELLLHLEDTLHQRLIGQEQAVSAVSRGIRRARVGLKNPNR 533
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAKALA+Y+FG+E++MIRLDMSE+ME HTV+KLIGSPPGYVGY
Sbjct: 534 PIASFIFSGPTGVGKTELAKALASYFFGAEDSMIRLDMSEYMESHTVAKLIGSPPGYVGY 593
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRR+PYTV+LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+
Sbjct: 594 DEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIIL 653
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GFD D + ++SYNRI++LV EELK YFRPEFLNRLDE+IVF Q
Sbjct: 654 TSNIGSKVIEKGGSGLGFDFD-TQANASYNRIRTLVNEELKAYFRPEFLNRLDEIIVFTQ 712
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L++ EVK+IA+IML+EV RL K I L+V++RF+E VV+EGYNPSYGARPLRRAIMRLL
Sbjct: 713 LSRDEVKQIAEIMLREVSKRLTEKGITLEVSDRFKELVVQEGYNPSYGARPLRRAIMRLL 772
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE ML+ EI +GD+ ++DVD D V V
Sbjct: 773 EDSLAEAMLSGEITDGDTALIDVDDDSQVRV 803
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 54/68 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AI+VIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG + R
Sbjct: 1 MFEHFTSEAIRVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKDAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 REVEKIIG 68
>gi|428211805|ref|YP_007084949.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000186|gb|AFY81029.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 828
Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/754 (64%), Positives = 608/754 (80%), Gaps = 11/754 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT + ++ ++ EA +LG YI +EHLLL L + EGVA ++LE
Sbjct: 68 GRGSGFVPVEI--PFTPRGKSILEMSLREASQLGQQYIATEHLLLALTQSREGVAFKILE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGG----GSSGNKMPTLEEYGTNLTKLAEEGKL 196
NLG +R +VI+ VGE+ GA GG G K L E+G NLT+ A EG L
Sbjct: 126 NLGVSLERVRAEVIKRVGENPAPAGAVFGGERGRGPGSQKALQLSEFGVNLTEKALEGNL 185
Query: 197 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKV 256
DPVVGR+ +IER++QILGRRTKNNP L+GEPGVGKTA+AEGLAQRIA+ DVP+T++ K+V
Sbjct: 186 DPVVGRKKEIERIIQILGRRTKNNPVLVGEPGVGKTALAEGLAQRIANQDVPETLKDKQV 245
Query: 257 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANI 316
TLDMG ++AGT++RG+FEER+K +MEE++Q+ IIL IDE+HTL+GAG+ EG +DAAN+
Sbjct: 246 FTLDMGSILAGTRFRGDFEERIKMIMEEVRQAKNIILVIDEIHTLVGAGSVEGGMDAANL 305
Query: 317 LKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYE 376
LKP+LARGE QCIGATTLDEYRKHIE+D ALERRFQPV + EP++ ETI+IL+G+R RYE
Sbjct: 306 LKPALARGEFQCIGATTLDEYRKHIERDAALERRFQPVTIGEPTIQETIEILQGVRVRYE 365
Query: 377 IHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKE 436
HHKL +DEALV+AA+LS +YI+DRFLPDKAIDLIDEAGSRVRLR+ ++P R+++K+
Sbjct: 366 EHHKLTISDEALVAAAELSERYITDRFLPDKAIDLIDEAGSRVRLRNGKMPSALRQMKKQ 425
Query: 437 LRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTE 496
L ++T EK AVR QDFEKA +LRDRE+ L+ ++ D+ + AE + VVT
Sbjct: 426 LTEVTAEKEAAVRTQDFEKASKLRDRELTLEEEL----DQRIKNEHAEVQ-NTKNLVVTG 480
Query: 497 VDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKN 556
DI IV+ WT +PV K++ ES++L+ MEETLH+R+IGQ+EAVKA+SRAIRRARVGLKN
Sbjct: 481 EDIAQIVAFWTSVPVSKLTESESEKLMLMEETLHQRLIGQEEAVKAVSRAIRRARVGLKN 540
Query: 557 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 616
PNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGSPPG+
Sbjct: 541 PNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGF 600
Query: 617 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 676
VGY EGGQLTEAVRRRPYTV+LFDEIEKAHPDVFNM+LQ+LEDGRLTD+KGR VDFKNT+
Sbjct: 601 VGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQVLEDGRLTDAKGRVVDFKNTM 660
Query: 677 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
LIMTSN+GS VIEKGG +GF+ + ++ Y+RI+SLV EELK YFRPEFLNRLDE+IV
Sbjct: 661 LIMTSNIGSRVIEKGGGGLGFEFADNRAEAHYDRIRSLVNEELKNYFRPEFLNRLDEIIV 720
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
F QLTK EV EIA+I+L+++ RL K + L++++RF+ER+VEEGYNPSYGARPLRRAIM
Sbjct: 721 FHQLTKDEVTEIAEILLRDLLKRLVEKQMTLEISDRFKERLVEEGYNPSYGARPLRRAIM 780
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
RLLED +AE ML+ ++ EGDS +D+D G V V
Sbjct: 781 RLLEDHLAEAMLSGKLNEGDSARIDLDEAGEVVV 814
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FTEK+IK IMLAQ+EARRLGHN++G+E LLLGL+ EG G+AA+VL++ G + R
Sbjct: 1 MFEYFTEKSIKAIMLAQQEARRLGHNFVGTEQLLLGLIAEGTGIAAQVLKSEGVTLNKAR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|254416553|ref|ZP_05030305.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196176757|gb|EDX71769.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 827
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/770 (65%), Positives = 625/770 (81%), Gaps = 16/770 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT KA ++ + +EAR+LGHNYIG EHLLL +L++ + VA +VL+
Sbjct: 68 GRGSGFVPAEI--PFTPKAKRLFEQSFKEARQLGHNYIGPEHLLLAILQDTDSVAGKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGA-GVGGGSSG--NKMPTLEEYGTNLTKLAEEGKLD 197
+LG +PS RT++I+ +GE A A G G G +K TLEE+G NLT+LA EGKLD
Sbjct: 126 SLGVNPSTARTKLIQAIGEVAAAATARGPGTSMMGRTSKSATLEEFGRNLTQLASEGKLD 185
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PVVGR +IER++QILGRRTKNNP L+GEPGVGKTAIAEGLAQRI+ VP+ +E K+VI
Sbjct: 186 PVVGRVKEIERIIQILGRRTKNNPVLLGEPGVGKTAIAEGLAQRISDSQVPELLENKQVI 245
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+LD+G L++GT++RG+FEER+K +M E++++ IIL IDE+HTL+GAGA EG +DAANIL
Sbjct: 246 SLDIGSLISGTRFRGDFEERIKNIMAEVREAGNIILVIDEIHTLVGAGALEGGLDAANIL 305
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGELQC+GATTLDEYRKHIE+D ALERRFQP+ V EPSV+ETI+IL+GLR+ YE
Sbjct: 306 KPALARGELQCVGATTLDEYRKHIERDAALERRFQPIMVGEPSVEETIEILQGLRDAYEQ 365
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++ +D AL +AA+LS +YISDRFLPDKAIDLIDEAGSRV L H Q R++++++
Sbjct: 366 HHRVEISDHALDAAAKLSDRYISDRFLPDKAIDLIDEAGSRVHLIHCQPSPATRDIKRQM 425
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV--GPVVT 495
RQ+TKEK EAVR QDFEKA +LRDRE +L+ Q+ A++ +AET+ P+V
Sbjct: 426 RQVTKEKEEAVRLQDFEKAAQLRDREQELETQLQAIL-------QAETDEDTPVQTPLVN 478
Query: 496 EVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLK 555
E DI HIVS+WTG+PV K++ ES LL +E+TLH+R+IGQ+EAV A+S+AIRRARVGLK
Sbjct: 479 EEDIAHIVSSWTGVPVNKLTESESALLLHIEDTLHQRLIGQEEAVTAVSKAIRRARVGLK 538
Query: 556 NPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 615
+PNRPIASFIFSGPTGVGK+ELAKALAAY+FGSEEAMIRLDMSE+M+ HTVSKLIGSPPG
Sbjct: 539 DPNRPIASFIFSGPTGVGKTELAKALAAYFFGSEEAMIRLDMSEYMDPHTVSKLIGSPPG 598
Query: 616 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 675
+VGY EGGQLTEAVRR+PYTV+LFDEIEKAHPDVFN +LQ+L+DGRLTD+KGRTVDFKNT
Sbjct: 599 FVGYDEGGQLTEAVRRQPYTVLLFDEIEKAHPDVFNSLLQLLDDGRLTDAKGRTVDFKNT 658
Query: 676 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMI 735
L+IMTSN+GS VIEKGG GF+ + +S YNRI+S V +ELK YFRPEFLNRLD++I
Sbjct: 659 LIIMTSNIGSRVIEKGGGGFGFEDSDNLAESQYNRIRSRVNDELKDYFRPEFLNRLDDII 718
Query: 736 VFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAI 795
VFRQL + E+K+IAD++L EV RL + I L+VTERF++R+VEEGY+PSYGARPLRR I
Sbjct: 719 VFRQLNRDEIKQIADLLLVEVSTRLVEQGITLEVTERFKDRLVEEGYDPSYGARPLRRTI 778
Query: 796 MRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
MRLLEDS+AE MLA EI EG++ +VDVD +G V VL G S P L P+
Sbjct: 779 MRLLEDSLAEAMLASEILEGETAVVDVDENGEVKVLPGES--PARLLQPV 826
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT++AIK IMLAQEEARRLGHN +G+E +LLGLLREG VAA VL+ + + R
Sbjct: 1 MFEHFTDRAIKSIMLAQEEARRLGHNLVGTEQILLGLLREGTSVAAIVLKEMDVTLESTR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
V +++G + V A +
Sbjct: 61 KVVEKIIGRGSGFVPAEI 78
>gi|427715740|ref|YP_007063734.1| ATPase [Calothrix sp. PCC 7507]
gi|427348176|gb|AFY30900.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 815
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/750 (65%), Positives = 612/750 (81%), Gaps = 16/750 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + +EA LGHNYI +EH+LLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFKEAHSLGHNYINTEHVLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D ++R+ VIR +G++ GGG + +LEE+G NLTKLA+EG+LDPVV
Sbjct: 126 NLGVDLKSVRSAVIRRLGDNP---NVAAGGGQRRTQTLSLEEFGRNLTKLAQEGRLDPVV 182
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LD
Sbjct: 183 GREKEIERTIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPEVLLNKQVISLD 242
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MG LVAGT++RG+FEERLKK+MEEI+ IIL IDEVHTL+GAG EG +DAANILKP+
Sbjct: 243 MGSLVAGTRFRGDFEERLKKVMEEIRSVGNIILVIDEVHTLVGAGGTEGGLDAANILKPA 302
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTL+EYR+HIE+D ALERRFQP+ V EPSV ET+QIL GLR YE HHK
Sbjct: 303 LARGELQCIGATTLNEYRQHIERDAALERRFQPILVGEPSVAETVQILYGLRSAYEQHHK 362
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+ +D A+++AA+LS +YISDRFLPDKAIDLIDEAGSRV LR++Q+ +EL++EL +
Sbjct: 363 VHISDAAVLAAAELSDRYISDRFLPDKAIDLIDEAGSRVHLRNSQISSN-KELKRELTGV 421
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
+K K+EAVR QDF KAG+LR++E+ L +Q+ + + ++ P+V E DI
Sbjct: 422 SKSKDEAVRLQDFGKAGKLRNQELQLTSQLHPELQNDQNVNI---------PIVDEEDIA 472
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV A+SRAIRRARVGLKNPNRP
Sbjct: 473 QIVASWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVTAVSRAIRRARVGLKNPNRP 532
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAKALAAY+FG+E++MIRLDMSE+ME HTVSKLIGSPPGYVGY
Sbjct: 533 IASFIFSGPTGVGKTELAKALAAYFFGAEDSMIRLDMSEYMEGHTVSKLIGSPPGYVGYD 592
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
+GGQLTEAVRR+PY+V+LFDEIEKAHPDVFNM+LQ+L+DG LTD+KGR VDFKNTL+I+T
Sbjct: 593 DGGQLTEAVRRKPYSVLLFDEIEKAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIILT 652
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GFD D ++ D+SYNRI++LV EELK YFRPEFLNRLD++IVF QL
Sbjct: 653 SNIGSKVIEKGGGGLGFDFD-NQADASYNRIRTLVNEELKAYFRPEFLNRLDDIIVFTQL 711
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
+K EVK+I++I+L+EV RL + I L+VTERF+ERVV+EGYNPSYGARPLRRAIMRLLE
Sbjct: 712 SKDEVKQISEILLREVSSRLTERGITLEVTERFKERVVQEGYNPSYGARPLRRAIMRLLE 771
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE +LA +I GD+ IVDVD DG V V
Sbjct: 772 DSLAEALLAGQITNGDTAIVDVDDDGQVRV 801
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG + R
Sbjct: 1 MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLSELGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|119488402|ref|ZP_01621575.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455213|gb|EAW36353.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 828
Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/789 (64%), Positives = 630/789 (79%), Gaps = 25/789 (3%)
Query: 67 STVAVSLSSRRGKS------------GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLG 114
++VA L S RG + GR GF+ + FT +A +V + +EAR+LG
Sbjct: 42 TSVAAKLLSDRGVTLEDGRREVESIIGRGSGFIPAEI--PFTPRAKRVFEGSLQEARQLG 99
Query: 115 HNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG 174
+NYIG EH+LLGLL++ EGVAA+VLEN + + +RT +IR +GE + GG +SG
Sbjct: 100 NNYIGPEHILLGLLQDEEGVAAKVLENFSIERAKLRTDIIRALGEDAGST-VSAGGRASG 158
Query: 175 NKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 233
NK TL+E+GTNL+KLA EGKLDPVVGR+ +IERV+QILGRRTKNNP L+GEPGVGKTA
Sbjct: 159 NKRTVTLDEFGTNLSKLAAEGKLDPVVGREREIERVIQILGRRTKNNPVLVGEPGVGKTA 218
Query: 234 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 293
IAEGLAQRI D+P+ + K+V +LDMG LVAGT++RGEFEERLKK++EEI+ IIL
Sbjct: 219 IAEGLAQRIVQEDIPELLADKQVFSLDMGSLVAGTRFRGEFEERLKKIVEEIRSCGNIIL 278
Query: 294 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 353
IDE+HT++GAGA EG++DAAN+LKP+LARGELQC+GATTLDEYRKHIE+D ALERRFQP
Sbjct: 279 VIDEIHTIVGAGAIEGSMDAANMLKPALARGELQCLGATTLDEYRKHIERDAALERRFQP 338
Query: 354 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 413
V V EPSV++T++IL GLR YE HH+L TD+A+ +AA LS +YISDRFLPDKAIDLID
Sbjct: 339 VMVGEPSVEDTVEILFGLRSAYEQHHRLTITDQAVYAAATLSDRYISDRFLPDKAIDLID 398
Query: 414 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 473
EAGSRVR+ +++ E +EL++EL I +EK E V+ QDFEKAGELRDRE++LK +I A
Sbjct: 399 EAGSRVRVMNSKPSPETQELKRELSDIIREKEETVKKQDFEKAGELRDREIELKEKIEA- 457
Query: 474 VDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 533
V GKE SKA + +V E DI +++AWT IPV K++ ES +LL MEETLH+R+
Sbjct: 458 VTTGKETSKAPLQL-----MVGEEDIAEVLAAWTSIPVSKLTESESQKLLHMEETLHQRL 512
Query: 534 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 593
IGQDEAV A+SRAIRRARVGLKNPNRPIASFIFSGPTGVGK+EL KALAAY+FGSEEAMI
Sbjct: 513 IGQDEAVSAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMI 572
Query: 594 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 653
RLDMSEFMERHTVSKLIGSPPGYVG+ EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+
Sbjct: 573 RLDMSEFMERHTVSKLIGSPPGYVGFDEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNML 632
Query: 654 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 713
LQILEDGRLTD+KGRTV FKNTLLIMTSN+GS VIEKGG +GF+L +D Y RI++
Sbjct: 633 LQILEDGRLTDAKGRTVSFKNTLLIMTSNIGSKVIEKGGGGLGFELGEPGEDLQYTRIRN 692
Query: 714 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 773
LV EELKQ+FRPEFLNRLDE+IVFRQL + EV+ IAD+ML+EVF RL+ K + ++V+++F
Sbjct: 693 LVNEELKQFFRPEFLNRLDEIIVFRQLEREEVRHIADLMLQEVFRRLREKGMTIEVSDKF 752
Query: 774 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
+E ++E GY+ +YGARP+RRA+M LLED++AE ML+ + EG+ +VD+D +G V V G
Sbjct: 753 KEHLIEVGYDRNYGARPMRRAVMSLLEDALAEAMLSGLLTEGNHALVDMDEEGKVKVSLG 812
Query: 834 S---SGAPE 839
APE
Sbjct: 813 ERQPEDAPE 821
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 53/68 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F++KAIKV+ML+QEEARRLGHN++G+E LLLG+L EG VAA++L + G + R
Sbjct: 1 MFEYFSDKAIKVVMLSQEEARRLGHNFVGTEQLLLGILGEGTSVAAKLLSDRGVTLEDGR 60
Query: 151 TQVIRMVG 158
+V ++G
Sbjct: 61 REVESIIG 68
>gi|434403529|ref|YP_007146414.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257784|gb|AFZ23734.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 817
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/751 (65%), Positives = 608/751 (80%), Gaps = 16/751 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHSLGHNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D +RT V+R +G+ VGG S N+ T+EE+G NLTKLA+EGKLDPV
Sbjct: 126 NLGVDLKAVRTAVMRRLGDDASVF---VGGNSQKRNQKLTIEEFGRNLTKLAQEGKLDPV 182
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR +IER +QILGRRTKNNP LIGEPGVGKTAIAEG+AQRI + D P+ + K+VI+L
Sbjct: 183 VGRGKEIERTIQILGRRTKNNPVLIGEPGVGKTAIAEGIAQRIVNQDAPEILLNKQVISL 242
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMG LV+GT++RG+FEERLKK+M+EI+ IIL IDEVHTL+GAG EG +DAANILKP
Sbjct: 243 DMGSLVSGTRFRGDFEERLKKIMDEIRSVGNIILVIDEVHTLVGAGGTEGGLDAANILKP 302
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIGATTL EYR+HIE+D ALERRFQP+ V EPS++ET+QIL GLR YE HH
Sbjct: 303 ALARGELQCIGATTLKEYRQHIERDAALERRFQPILVGEPSIEETVQILYGLRSAYEQHH 362
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
K+ +D A+++AA+LS +YISDRFLPDKAIDLIDEAGSRV LR+++ +EL++EL
Sbjct: 363 KVHISDAAILAAAELSERYISDRFLPDKAIDLIDEAGSRVHLRNSR-SSTNKELKRELIS 421
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+TK K +A+R QDF KA +LR +E++L+ Q+ A ++ET+ P+V E DI
Sbjct: 422 VTKSKEDAIRVQDFGKAVKLRGQELELQTQLHA---------ESETDKTVTIPIVGEEDI 472
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTG+PV K++ ES+ LL +E+TLH+R+IGQ++AV ++SRAIRRARVGLKNPNR
Sbjct: 473 AQIVASWTGVPVNKLTESESELLLHLEDTLHQRLIGQEQAVTSVSRAIRRARVGLKNPNR 532
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAKALAAY+FGSEEAMIRLDMSEFME HTVSKLIGSPPGYVGY
Sbjct: 533 PIASFIFSGPTGVGKTELAKALAAYFFGSEEAMIRLDMSEFMESHTVSKLIGSPPGYVGY 592
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
+GGQLTEAVRR+PY+V+LFDEIEKAHPDVFNM+LQIL+DG+LTD+KGR VDFKNTL+I+
Sbjct: 593 DDGGQLTEAVRRKPYSVLLFDEIEKAHPDVFNMLLQILDDGQLTDAKGRKVDFKNTLIIL 652
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ ++ ++SYNRI++LV EELK YFRPEFLNRLDE+IVF Q
Sbjct: 653 TSNIGSKVIEKGGSGLGFEFADNQSEASYNRIRTLVNEELKAYFRPEFLNRLDEIIVFTQ 712
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K EVK+IA+IML +V RL + I+L+V++RF+ERVV+EGYNPSYGARPLRRAIMRLL
Sbjct: 713 LGKDEVKQIAEIMLLDVAGRLTERGIKLEVSDRFKERVVQEGYNPSYGARPLRRAIMRLL 772
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE +L+ +I +GD+ IVD+D DG V V
Sbjct: 773 EDSLAEALLSGQIADGDTAIVDIDDDGQVRV 803
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AI+VIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG + R
Sbjct: 1 MFEHFTSEAIRVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTELGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|427708390|ref|YP_007050767.1| ATPase [Nostoc sp. PCC 7107]
gi|427360895|gb|AFY43617.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 813
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/753 (67%), Positives = 613/753 (81%), Gaps = 24/753 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + +EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKNLFEQSFKEAHGLGHNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLD 197
NLG D +RT V+R +GE G GG+S + TLEE+G NL+KLA+EGKLD
Sbjct: 126 NLGVDLRLVRTAVMRRLGED----GNVTAGGNSPRRNQQALTLEEFGRNLSKLAQEGKLD 181
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PVVGR+ +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI
Sbjct: 182 PVVGREKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPELLLNKQVI 241
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+LDMGL+VAGT++RG+FEERLKK+M+EI+ I+L IDE+HTL+GAG EG +DAANIL
Sbjct: 242 SLDMGLVVAGTRFRGDFEERLKKIMDEIRSVGNIVLVIDEIHTLVGAGGTEGGLDAANIL 301
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGELQC+GATTLDEYRKHIE+D ALERRFQP+ V EPSV+ETIQIL GLR YE
Sbjct: 302 KPALARGELQCLGATTLDEYRKHIERDAALERRFQPILVGEPSVEETIQILYGLRGAYEQ 361
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HHK+ TD A+++AAQLS +YISDRFLPDKAIDLIDEAGSRVRLR++Q+ +EL+++L
Sbjct: 362 HHKVEITDAAVLAAAQLSDRYISDRFLPDKAIDLIDEAGSRVRLRNSQISAN-KELKRQL 420
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
+TK K+EAVR QDF+KAGELRD+E++++AQ+ TE P V E
Sbjct: 421 VSVTKAKHEAVRLQDFDKAGELRDQELEIEAQL-------------HTEQTISIPTVGEE 467
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
DI IV++WTG+PV K++ ES+ LL +E+TLH+R+IGQ++AV ++SRAIRRARVGLKNP
Sbjct: 468 DIAQIVASWTGVPVNKLTESESELLLHLEDTLHQRLIGQEQAVTSVSRAIRRARVGLKNP 527
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
NRPIASFIFSGPTGVGK+ELAKALAAY+FG+EEAMIRLDMSEFME HTVSKLIGSPPGYV
Sbjct: 528 NRPIASFIFSGPTGVGKTELAKALAAYFFGAEEAMIRLDMSEFMESHTVSKLIGSPPGYV 587
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTEAVRR+PYTV+LFDEIEKAHPDVFNM+LQIL+DG+LTD+KGR VDFKNTL+
Sbjct: 588 GYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGQLTDAKGRRVDFKNTLI 647
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
I+TSN+GS VIEKGG +GF+ D ++ ++SY+RI++LV EELK YFRPEFLNRLDE+IVF
Sbjct: 648 ILTSNIGSKVIEKGGGGLGFEFD-NQAEASYHRIRNLVNEELKTYFRPEFLNRLDEIIVF 706
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
QL+K EVKEIA+IML++V +RL K I L+VTE F+E VV EGYNPSYGARPLRRAIMR
Sbjct: 707 TQLSKDEVKEIAEIMLRDVANRLTEKGITLEVTEAFKELVVNEGYNPSYGARPLRRAIMR 766
Query: 798 LLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
LLEDS+AE +L+ EI GD+ I DVD DG V +
Sbjct: 767 LLEDSLAEALLSGEISNGDAAIADVDDDGQVKI 799
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AIKVIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG R
Sbjct: 1 MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLSELGVTLKEAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|298490318|ref|YP_003720495.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298232236|gb|ADI63372.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 815
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/750 (65%), Positives = 599/750 (79%), Gaps = 16/750 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHSLGHNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG + IR VI +GE V AG GS N+ ++EE+G NLTK+A++GKLDPVV
Sbjct: 126 NLGVELQGIRAAVISRLGEDV-TVFAGTVSGSKRNQNLSIEEFGRNLTKMAQDGKLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LD
Sbjct: 185 GRQREIERTVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPEVLLNKQVISLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGT++RG+FEERLKK+M+EI+ IIL IDE+HTL+GAG EG +DAANILKP+
Sbjct: 245 MGLLVAGTRFRGDFEERLKKIMDEIRSEGNIILVIDEIHTLVGAGGTEGGLDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIE+D ALERRFQP+ V EPSV ETI+IL GLR YE HHK
Sbjct: 305 LARGELQCIGATTLDEYRKHIERDAALERRFQPILVGEPSVGETIEILYGLRSAYEQHHK 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+ +D A+V AAQLS +YISDRFLPDKAIDLIDEAGSRVRLRH+++ +E++ +L+ I
Sbjct: 365 VTISDAAVVVAAQLSDRYISDRFLPDKAIDLIDEAGSRVRLRHSRIINN-KEIKLQLKNI 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
+K+K EA+R QDF KA +L E++L+A+I E V +V E DI
Sbjct: 424 SKDKAEAIRVQDFGKASKLNQEELELQAKID-----------LEDNLQTVKAIVDEEDIA 472
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV A+SR+IRRARVGLKNP RP
Sbjct: 473 QIVASWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVAAVSRSIRRARVGLKNPKRP 532
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAKALAAY+FG+ ++MIRLDMSE+ME H VSKLIGSPPGYVGY
Sbjct: 533 IASFIFSGPTGVGKTELAKALAAYFFGAGDSMIRLDMSEYMESHNVSKLIGSPPGYVGYD 592
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRR+PYTV+LFDEIEKAH DVFNM+LQIL++G LTD+KGR VDFKNTL+I+T
Sbjct: 593 EGGQLTEAVRRKPYTVLLFDEIEKAHSDVFNMLLQILDEGHLTDAKGRKVDFKNTLIILT 652
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D ++ D+SYN I+ LV EELK YFRPEFLNR+D++IVF QL
Sbjct: 653 SNIGSKVIEKGGISLGFEFD-NQADASYNGIRKLVNEELKAYFRPEFLNRVDDIIVFTQL 711
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVK+IA+IML +V +RLK + I+L+VTE F+E VV EGY+PSYGARPLRRAIMRLLE
Sbjct: 712 NKEEVKQIAEIMLHDVANRLKDRGIKLEVTESFKELVVREGYDPSYGARPLRRAIMRLLE 771
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE +L+ I EGD+ IVDVD DG VTV
Sbjct: 772 DSLAEAILSSHILEGDTAIVDVDDDGQVTV 801
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AI+VIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG + R
Sbjct: 1 MFEHFTSEAIRVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKDAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|282898552|ref|ZP_06306540.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281196420|gb|EFA71329.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 817
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/750 (65%), Positives = 608/750 (81%), Gaps = 15/750 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHGLGHNYINTEHLLLGLTDAGEGVAAKVLK 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+LG + +R++V+ ++GE V AG N+ ++EE+G NLTKLA++G+LDPVV
Sbjct: 126 SLGIELQTVRSRVMSILGEDNRVV-AGRQDNPRRNQNLSIEEFGRNLTKLAQQGRLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LD
Sbjct: 185 GRQTEIERTVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPEILLNKQVISLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGT++RG+FEERLKK+MEEI+ IIL IDE+HT++GAG EG +DAANILKP+
Sbjct: 245 MGLLVAGTRFRGDFEERLKKVMEEIRSVGNIILVIDEIHTIVGAGGTEGGLDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRK+IE+D ALERRFQP+ V EPSV ETI+IL GLR YE HHK
Sbjct: 305 LARGELQCIGATTLDEYRKYIERDAALERRFQPILVGEPSVAETIEILGGLRSAYEQHHK 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+ +D+A+++AA+LS +YISDRFLPDKAIDLIDEAGSRVRLRH+++ + +EL+++L+
Sbjct: 365 VTISDDAVIAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRHSRIIDN-KELKQQLKNT 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
++EK EAVR QDF KA +LR E+DL+ Q++ + + K P V E DI
Sbjct: 424 SQEKAEAVRVQDFGKASKLRQEELDLQTQLAI----AQNLPKITI------PQVDEEDIA 473
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV A+SR++RRARVGLK+PNRP
Sbjct: 474 EIVASWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVTAVSRSLRRARVGLKSPNRP 533
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAKALA Y+FG+E++MIRLDMSE+ME H VSKLIGSPPGYVGY
Sbjct: 534 IASFIFSGPTGVGKTELAKALATYFFGAEDSMIRLDMSEYMESHNVSKLIGSPPGYVGYD 593
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRR+PYT++LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+T
Sbjct: 594 EGGQLTEAVRRKPYTLLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILT 653
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D ++ ++SYNRI++LV EELK YFRPEFLNR+DE+IVF QL
Sbjct: 654 SNIGSKVIEKGGMSLGFEFD-NQANASYNRIRNLVNEELKSYFRPEFLNRVDEIIVFSQL 712
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVKEI+ IML+EV RL+ K I+L+VTE F++ VV EGY+PSYGARPLRRAIMRLLE
Sbjct: 713 NKDEVKEISQIMLEEVAKRLQEKGIKLEVTEAFKDLVVTEGYDPSYGARPLRRAIMRLLE 772
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+AE +L+ EI+EGD IVDVD DG V V
Sbjct: 773 DSLAEVILSGEIREGDQAIVDVDDDGLVKV 802
>gi|297734500|emb|CBI15747.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/541 (94%), Positives = 526/541 (97%), Gaps = 2/541 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ EEAR+LGHNYIGSEHLLLGLLREGEGVAARVLE
Sbjct: 206 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 263
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLGADPSNIRTQVIRMVGESTEAVGAGVGGG++GNKMPTLEEYGTNLTKLAEEGKLDPVV
Sbjct: 264 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVV 323
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVP+TIEGKKVITLD
Sbjct: 324 GRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 383
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP+
Sbjct: 384 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 443
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK
Sbjct: 444 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 503
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
LRYTDEALVSAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI
Sbjct: 504 LRYTDEALVSAARLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 563
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TKEKNEAVR QDFEKAGELRDREMDLKAQIS L+DKGKEM+KAETEAGD+GP+VTEVDIQ
Sbjct: 564 TKEKNEAVRSQDFEKAGELRDREMDLKAQISTLIDKGKEMTKAETEAGDIGPMVTEVDIQ 623
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
HIVSAWTGIPVEKVSTDESDRLLKMEETLH+RVIGQDEAVKAISRAIRRARVGLKNPNRP
Sbjct: 624 HIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRP 683
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT
Sbjct: 684 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 743
Query: 621 E 621
E
Sbjct: 744 E 744
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 6/164 (3%)
Query: 1 MARLLAQLTNAPALVPGGRHFQSQNAGKSRRNVKMMSYMQPSASRISSFSGLRRSNALDT 60
MAR L Q TN A V G+H + Q + +++++VKMM +Q RI FSGLR +NALD
Sbjct: 49 MARALVQSTNIFASVADGKHGKFQGSERTKKSVKMMCNVQAPGLRIRGFSGLRGANALDN 108
Query: 61 FT---CDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
DFHS VA ++S R GK+ R V +AMFERFTEKAIKVIMLAQEEARRLGHN+
Sbjct: 109 LVRSGHDFHSRVAAAISVRGGKASRC---VARAMFERFTEKAIKVIMLAQEEARRLGHNF 165
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
+G+E +LLGL+ EG G+AA+VL+++G + + R +V +++G +
Sbjct: 166 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS 209
>gi|242624367|ref|YP_003002285.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
gi|239997475|gb|ACS36997.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
Length = 833
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/750 (64%), Positives = 605/750 (80%), Gaps = 17/750 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ +A EEAR LGH YIG+EH+LL LL E GV RVL+
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLEIAIEEARDLGHGYIGTEHILLALLEEEVGVGVRVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
LG + S IRT+V+ +GE+ E V G ++EE+ TNLT+ A GKLDPVV
Sbjct: 126 QLGLEVSQIRTEVLMQIGETLEVVLGGDRSEFFEMSGVSIEEFTTNLTEAAFNGKLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +IERV+QIL RR KNNP LIGEPGVGKTA+AEGLAQRI DVPD ++ K+VI+LD
Sbjct: 186 GRDEEIERVIQILARRRKNNPVLIGEPGVGKTAVAEGLAQRIVKRDVPDLLDEKQVISLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLL+AGTKYRGEFEERLK++++E++ S+ IIL IDEVHTLIGAGAAEGA+DAANILKP+
Sbjct: 246 IGLLLAGTKYRGEFEERLKRIIDEVRSSNNIILVIDEVHTLIGAGAAEGAVDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATT+DEYRKHIE+D ALERRFQPV++ EPSV +T+QIL+ LR YE HH
Sbjct: 306 LARGELQCIGATTIDEYRKHIERDSALERRFQPVQIDEPSVSDTVQILRCLRPSYERHHG 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ +DEAL +AA + QYI+DRFLPDKAIDLIDEAGSRVRL+ ++P+ A +L++ELR I
Sbjct: 366 LKISDEALEAAASMGAQYIADRFLPDKAIDLIDEAGSRVRLKAVRMPDAASDLDRELRDI 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISAL---VDK--GKEMSKAETEAGDVGPVVT 495
KEK+ A+ Q+FE A DRE++L+AQ+SA+ VD+ G + K V PVVT
Sbjct: 426 IKEKDTAIADQNFEVAATALDRELELRAQLSAILATVDRIPGPAIKKM------VDPVVT 479
Query: 496 EVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLK 555
E DI ++VSAWTGIPV K+S ES++LL MEETLH R+IGQ++AV A+SRAIRRARVGL+
Sbjct: 480 EDDIANVVSAWTGIPVNKISKSESEKLLHMEETLHSRIIGQEQAVSAVSRAIRRARVGLR 539
Query: 556 NPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 615
NPNRPIASF+FSGPTGVGK+EL KALA Y+FG+E+AM+RLDMSEFMERHTV+KLIGSPPG
Sbjct: 540 NPNRPIASFLFSGPTGVGKTELTKALALYFFGAEDAMVRLDMSEFMERHTVAKLIGSPPG 599
Query: 616 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 675
YVGY+EGGQLTEAVRR+PYTVVLFDE+EKAHPDVFN++LQILEDGRLTDSKGRT+DFKNT
Sbjct: 600 YVGYSEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNT 659
Query: 676 LLIMTSNVGSSVIEKGGRR---IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRL 731
+LI+TSN+G+ VI++ IGF + + DSSY+R+ SLV EELK++FRPEFLNRL
Sbjct: 660 MLILTSNIGAKVIQENDSSSGDIGFGGNLVNGNDSSYDRMASLVNEELKRFFRPEFLNRL 719
Query: 732 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 791
DE+IVFRQLT+ ++ +IADIMLK++ DR + K L+VT+R + ++ EG+NP+YGARPL
Sbjct: 720 DEIIVFRQLTRNDLSQIADIMLKQLCDRAEDKSFTLKVTQRAKLVLINEGFNPTYGARPL 779
Query: 792 RRAIMRLLEDSMAEKMLAREIKEGDSVIVD 821
RRAIM+LLED +A ++L+ I+ G ++VD
Sbjct: 780 RRAIMKLLEDRLATQLLSESIEPGSMILVD 809
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKV+ML+QEE+RRLGHN++G+E +LLGL+ E GVA +VL +LG R
Sbjct: 1 MFERFTEKAIKVVMLSQEESRRLGHNFVGTEQILLGLIGENGGVAYKVLRSLGVTLREAR 60
Query: 151 TQVIRMVG 158
T+V R++G
Sbjct: 61 TEVERIIG 68
>gi|414079572|ref|YP_007000996.1| ATP-dependent Clp protease [Anabaena sp. 90]
gi|413972851|gb|AFW96939.1| ATP-dependent Clp protease [Anabaena sp. 90]
Length = 816
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/750 (65%), Positives = 607/750 (80%), Gaps = 15/750 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT K + + EA LGHNYI +EHLLLGL GEGVAA+VL+
Sbjct: 68 GRGSGFVPPEI--PFTPKVKSLFEQSFREAHGLGHNYINTEHLLLGLTEAGEGVAAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D IR+ V+ +GE T AV G S N+ ++E +G NLTKLA++G+LDPVV
Sbjct: 126 NLGVDLPVIRSAVMSRLGEDT-AVVTGGRSNSQRNQNLSIEAFGRNLTKLAQDGRLDPVV 184
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GRQ +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LD
Sbjct: 185 GRQKEIERTVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPEILLDKQVISLD 244
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MG +VAGT++RG+FEERLKK+MEE++ + IIL IDE+HTL+GAG EG +DAANILKP+
Sbjct: 245 MGSVVAGTRFRGDFEERLKKIMEEVRSAGNIILVIDEIHTLVGAGGTEGGLDAANILKPA 304
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQCIGATTLDEYR+HIE+D ALERRFQP+ V EPSV ETI IL GLR YE HH+
Sbjct: 305 LARGELQCIGATTLDEYRQHIERDAALERRFQPILVGEPSVAETIDILYGLRGAYEQHHR 364
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+ TDEA+V+AA+L+ +YISDRFLPDKAIDLIDEAGSRVRLRH+ + +EL++EL
Sbjct: 365 VNITDEAVVAAAELADRYISDRFLPDKAIDLIDEAGSRVRLRHSHIANN-KELKRELTTA 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
TK K+EA+R QDF KAG+LR +E++L+ ++ +++ +E A P+V E DI
Sbjct: 424 TKAKSEAIRVQDFSKAGKLRIQELELQTRLD--LEENQETVNA--------PLVNEEDIA 473
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
IV++WTG+PV K++ ES+ LL +E+TLH R+IGQ++AV ++SRAIRRARVGLK+PNRP
Sbjct: 474 QIVASWTGVPVNKLTESESELLLHLEDTLHTRLIGQEQAVTSVSRAIRRARVGLKSPNRP 533
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASFIFSGPTGVGK+ELAKALAAY+FG EE+M+RLDMSE+ME H VSKLIGSPPGYVGY
Sbjct: 534 IASFIFSGPTGVGKTELAKALAAYFFGDEESMVRLDMSEYMESHNVSKLIGSPPGYVGYD 593
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRR+PYTV+LFDEIEKAHPDVFNM+LQIL+DG LTD+KGR VDFKNTL+I+T
Sbjct: 594 EGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDAKGRKVDFKNTLIILT 653
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+GS VIEKGG +GF+ D + ++SY+RI++LV EELK YFRPEFLNR+D++IVF QL
Sbjct: 654 SNIGSKVIEKGGSSLGFEFD-NAAEASYHRIRNLVNEELKAYFRPEFLNRVDDIIVFTQL 712
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K EVK+IA+IML++V RLK K+I L+VTE F+E+VV+EGY+PSYGARPLRRAI+RLLE
Sbjct: 713 NKDEVKQIAEIMLRDVGSRLKEKNITLEVTEAFKEKVVQEGYDPSYGARPLRRAIVRLLE 772
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
DS+ E +L+ EI +GD IVDVD DG V V
Sbjct: 773 DSLVEAILSGEIADGDKAIVDVDDDGQVKV 802
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT +AI+VIMLAQEEARRLGHN++G+E +LLGL+ EG GVAA+VL LG R
Sbjct: 1 MFEHFTSEAIRVIMLAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKEAR 60
Query: 151 TQVIRMVGEST 161
+V +++G +
Sbjct: 61 REVEKIIGRGS 71
>gi|359459996|ref|ZP_09248559.1| ATPase AAA [Acaryochloris sp. CCMEE 5410]
Length = 822
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/740 (63%), Positives = 598/740 (80%), Gaps = 8/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT ++ +V+ +A EE+R+LGHNY+ +EHLLLGL+++ + VAA++L NLG D +IRTQV+
Sbjct: 80 FTPRSKRVLDIALEESRQLGHNYVSTEHLLLGLIQDEQSVAAQILVNLGIDIIDIRTQVM 139
Query: 155 RMVGESTEAV---GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+M EST A G G + K LEE GTNLT+LA G LDPVVGRQ +++R++Q
Sbjct: 140 QMFSESTVAPSRDGLRDRGIKTLQKKSILEEVGTNLTQLARAGNLDPVVGRQNEVQRMIQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNP LIGEPGVGKTA+AEGLAQ + + DVP+ ++GK+V+TL++G L+AGTKYR
Sbjct: 200 ILSRRTKNNPILIGEPGVGKTALAEGLAQLVINHDVPEALDGKRVLTLNVGSLLAGTKYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFE RLK ++EEI+ +IIL IDE+HTL+G+GAAEG +DAANILKPSLARGELQCIGA
Sbjct: 260 GEFEGRLKAIVEEIRSGGDIILVIDEIHTLVGSGAAEGGLDAANILKPSLARGELQCIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTL +YR++IE+DPALERRFQPV V E SV+ETIQIL+G+R YE HH+L +D AL +A
Sbjct: 320 TTLADYRQYIERDPALERRFQPVMVNESSVEETIQILQGVRSCYEQHHQLEISDLALEAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A+LS +YI DRFLPDKAIDLIDEAGSRVR+ H++ + L KELRQI + K EA + Q
Sbjct: 380 AKLSDRYICDRFLPDKAIDLIDEAGSRVRISHSKPASAHKALNKELRQILQGKKEATQKQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
D+ AGEL RE++++ +I KG S T+A + P V E DI HIV++W+G+P+
Sbjct: 440 DYSLAGELHIREVEIQKKIQGANQKG---SSNSTDA--IVPTVNEEDIAHIVASWSGVPL 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ ES+ LL++E+ LH+RVIGQ++AVKA+SRAIRR R GLK+PNRPIASF+FSGPTG
Sbjct: 495 HKLTESESENLLELEDILHQRVIGQEKAVKAVSRAIRRVRTGLKDPNRPIASFVFSGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELAK LA+ YFGSE AMIRLDMSE+ME HTV+KLIGSPPGYVGY EGGQLTEAVRR
Sbjct: 555 VGKTELAKVLASSYFGSEAAMIRLDMSEYMEGHTVAKLIGSPPGYVGYNEGGQLTEAVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PYTVVLFDEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFKNTLLIMTSN+GS VI+KG
Sbjct: 615 KPYTVVLFDEIEKAHPDVFNLLLQVLEDGRLTDAKGRTVDFKNTLLIMTSNLGSKVIQKG 674
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
G +GF+ D+ + Y+RI S+V EELKQ+FRPEFLNRLDE+IVF+QL K EVK+IADI
Sbjct: 675 GSGLGFEFSKDQSAAQYSRIVSIVNEELKQFFRPEFLNRLDEIIVFQQLHKTEVKQIADI 734
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
+L+EVF RL + I L+VT+ F++R+VE GY+P GARPLRRAI RLLED +AE++L R
Sbjct: 735 LLQEVFARLSEQGISLEVTDLFKDRLVETGYDPEMGARPLRRAITRLLEDCLAEEILTRR 794
Query: 812 IKEGDSVIVDVDSDGNVTVL 831
+K D +++DVD +G VL
Sbjct: 795 VKARDEIVIDVDEEGQTKVL 814
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 10/85 (11%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FTEKAIK I LAQ+EA L +G+E +LLG++ EG G+AA++L++ GA+ +R
Sbjct: 1 MFECFTEKAIKAITLAQQEATHLKQKCVGTELILLGIIAEGTGIAAKILKSSGANLKEVR 60
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGN 175
+V ++ G+ G SS N
Sbjct: 61 IEVKKL----------GISGTSSAN 75
>gi|443309789|ref|ZP_21039475.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442780161|gb|ELR90368.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 822
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/750 (64%), Positives = 596/750 (79%), Gaps = 24/750 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR FV + FT K +V + E AR+LG N+I EHL LGL+ EGEGVA +V+E
Sbjct: 68 GRGSRFVSAEI--PFTPKMKRVFDKSFEAARQLGDNFIAPEHLFLGLIEEGEGVAIKVIE 125
Query: 141 NLGADPSNIRTQVI-----RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGK 195
NLG D + R V+ + VG + V + G +G K TLEE+GTNLTKLA EGK
Sbjct: 126 NLGVDTAVARKAVLDELEKQPVGANRGNVQSSTSRGVAG-KTTTLEEFGTNLTKLAAEGK 184
Query: 196 LDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKK 255
LDPVVGR +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI ++PD +E K+
Sbjct: 185 LDPVVGRDKEIERAVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVDKNIPDILEDKQ 244
Query: 256 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 315
V +LD+G LVAGT++RG+FEER+K +MEEI+ + IIL IDEVH L+GAG+ +G +DAAN
Sbjct: 245 VFSLDVGSLVAGTRHRGDFEERIKTIMEEIRAAGNIILVIDEVHNLVGAGSVQGGMDAAN 304
Query: 316 ILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERY 375
ILKP+LARGELQC+GATTL+EYR+HIE+D ALERRFQP+ V EPSV+ETI+IL GLR Y
Sbjct: 305 ILKPALARGELQCLGATTLNEYRQHIERDAALERRFQPIMVGEPSVEETIEILYGLRSVY 364
Query: 376 EIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK 435
E HHK++ +DEA+ +AA+LS +YISDRFLPDKAIDLIDEAGSR L +Q E ++L++
Sbjct: 365 EQHHKIKISDEAIFAAAKLSDRYISDRFLPDKAIDLIDEAGSRAHLASSQQSPEVKQLKQ 424
Query: 436 ELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVT 495
EL I+K+K +AV+ QDFE AG+LRDRE+++ +I L + K+ VVT
Sbjct: 425 ELDSISKDKEKAVKDQDFEVAGQLRDREIEVNEKIK-LASENKQ------------AVVT 471
Query: 496 EVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
VD I HIV++WTGIP+ K++ ES LL +E+TLH+R+IGQ+EAV A+SRAIRRARV
Sbjct: 472 TVDEEAIAHIVASWTGIPLNKLTESESTVLLHLEDTLHQRIIGQEEAVTAVSRAIRRARV 531
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P+RPIASFIFSGPTGVGK+EL+KALAAY+FGSEEAMIRLDMSE+MERHTVSKLIGS
Sbjct: 532 GLKSPDRPIASFIFSGPTGVGKTELSKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGS 591
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLTEAVRR+PY+V+LFDEIEKAH DVFN++LQ+L+DGRLTD++GRTVDF
Sbjct: 592 PPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNLLLQLLDDGRLTDAQGRTVDF 651
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 732
KNTL+IMTSN+GS VIEKGG IGF+ + ++ YNRIK+LV EELK YFRPEFLNRLD
Sbjct: 652 KNTLIIMTSNIGSKVIEKGGGGIGFEFADNGAETQYNRIKTLVNEELKNYFRPEFLNRLD 711
Query: 733 EMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLR 792
E IVF QL K E+K+IADI+L EV +RL + + L+VT+ F+E VVE+GY+PSYGARPLR
Sbjct: 712 ETIVFTQLKKTEIKQIADILLLEVANRLAEQGMTLEVTDSFKELVVEQGYSPSYGARPLR 771
Query: 793 RAIMRLLEDSMAEKMLAREIKEGDSVIVDV 822
RAIM LLEDS+AE ML +IK GD+ IVDV
Sbjct: 772 RAIMSLLEDSLAEAMLTGQIKLGDNAIVDV 801
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F+++AIKVIMLAQEEARRLGHN +GSE +LLGL+ E +AA+VL +LG + N R
Sbjct: 1 MFEHFSKEAIKVIMLAQEEARRLGHNLVGSEQVLLGLIGENTSIAAKVLNDLGINIKNAR 60
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G + V A
Sbjct: 61 VEVEKIIGRGSRFVSA 76
>gi|406983152|gb|EKE04399.1| hypothetical protein ACD_20C00084G0019 [uncultured bacterium]
Length = 837
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/744 (63%), Positives = 602/744 (80%), Gaps = 11/744 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ L+ +EAR+LGHNYIG+EHLLLGL+REGEGVAARVLE
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLELSWDEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
NLG D + +R+ VIRM+GE+ + G S K PTL+E+GTNLT+ A+E +LDPVV
Sbjct: 126 NLGVDLNKVRSNVIRMLGETRTGASSTTSQGRS--KTPTLDEFGTNLTQAAQEQRLDPVV 183
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IERVVQILGRRTKNNP LIGEPGVGKTAIAEGLA RI SGD+P+ +E K+++ LD
Sbjct: 184 GREKEIERVVQILGRRTKNNPVLIGEPGVGKTAIAEGLANRIVSGDIPEILEDKRLVQLD 243
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
MGLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDE+HTLIGAGAAEGAIDAANILKP
Sbjct: 244 MGLLVAGTKYRGEFEERLKKIMDEIRGAGNVILIIDELHTLIGAGAAEGAIDAANILKPV 303
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
L+RGELQ IGATTLDEYRKH+E+D ALERRFQPV V +PSV+ET++I++GLR +YE HHK
Sbjct: 304 LSRGELQVIGATTLDEYRKHVERDAALERRFQPVFVDQPSVEETMEIIRGLRHKYEEHHK 363
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L +D A+ A +LS +YI+DRFLPDKAIDLIDEA SRVRL+ + LP E +E+EKEL+Q+
Sbjct: 364 LIISDAAIDYAVKLSDRYITDRFLPDKAIDLIDEASSRVRLQASSLPPEGKEIEKELKQV 423
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
++K +A+R Q+FEKA +LRD E DLK +I + K K E EA VVTE +I
Sbjct: 424 IRDKEQAIRDQEFEKASQLRDIEADLKEKIREISQKW----KTEQEANK--SVVTEEEIA 477
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+IVS+WTG+PV K++ E+DRLLK+E+TLHKRVIGQ A+ +IS+AIRRARVGLK+P+RP
Sbjct: 478 YIVSSWTGVPVTKLTEGETDRLLKLEDTLHKRVIGQHSAIVSISKAIRRARVGLKSPSRP 537
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
I SFIFSGPTGVGK+ELAKALA FGSEE MIR+DMSEFMERHT SKLIGSPPGYVGY
Sbjct: 538 IGSFIFSGPTGVGKTELAKALAESMFGSEENMIRIDMSEFMERHTTSKLIGSPPGYVGYN 597
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEA+R+RPY+VVLFDEIEKAHPDVFN++LQIL+DGRL+DS+GR +FKN+++IMT
Sbjct: 598 EGGQLTEAIRKRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLSDSRGRVTNFKNSVIIMT 657
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SNVG+ +E ++GF + DE+ Y R+K V EE+K+ FRPEFLNRLD++IVF L
Sbjct: 658 SNVGARSLENTS-KLGFAVAEDEEKDRYERVKDTVMEEMKKEFRPEFLNRLDDIIVFSHL 716
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
TK E+++I DIML ++ R+K +++ L++ ++ + EEGY+ +YGARPLRR I + +E
Sbjct: 717 TKEEIRKIVDIMLTDLIKRIKGQELMLEIPNEVKDFLAEEGYSQTYGARPLRRVIQKRIE 776
Query: 801 DSMAEKMLAREIKEGDSVIVDVDS 824
DS+AE++L KEGD + +D+D+
Sbjct: 777 DSIAEEILTGAYKEGDVIKLDLDN 800
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKVIMLAQEEARRLGHN++G+E +LLGL+ EG G+AA+ L+ +G + + R
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKTLKAMGVNLKDSR 60
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 61 VEVEKIIG 68
>gi|242620119|ref|YP_003002123.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
gi|239997364|gb|ACS36887.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
Length = 846
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/762 (61%), Positives = 601/762 (78%), Gaps = 7/762 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ +A EEAR LGH YIG+EH+LL LL E GV RVL+
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLEIAIEEARDLGHGYIGTEHVLLALLEEEVGVGVRVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
LG S IRT+++ +GES EA AG +EE+ TNLT+ A G LDPVV
Sbjct: 126 QLGLVISQIRTELLIQIGESIEAAVAGEKSELFDMGGLAIEEFTTNLTESAFNGNLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I RV+QIL RR KNNP LIGEPGVGKTA+AEGLAQRI DVP ++ K+VI+LD
Sbjct: 186 GRDDEISRVIQILARRRKNNPVLIGEPGVGKTAVAEGLAQRIVERDVPALLDDKQVISLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLL+AGTKYRGEFEERLK++++E++ S+ IIL IDEVHTLIGAGAAEGA+DAANILKP+
Sbjct: 246 VGLLLAGTKYRGEFEERLKRIVDEVRSSENIILVIDEVHTLIGAGAAEGAVDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQC+GATT++EYRKHIE+D ALERRFQPV++ EPSVD+T+ IL+ LR RYE HH
Sbjct: 306 LARGELQCLGATTVEEYRKHIERDSALERRFQPVQIDEPSVDDTVDILRCLRARYERHHG 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ D+AL +AA++ QYI+DRFLPDKAIDLIDEA +RVRLR + P+ A L++ELR +
Sbjct: 366 LKIGDDALEAAARMGAQYIADRFLPDKAIDLIDEASARVRLRATRTPDSATGLKRELRDV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK A+R QDFE+A ++ DRE++++AQ++ ++ K +S TE VV E DI
Sbjct: 426 MKEKEAAIREQDFERAADILDREIEIRAQLNIILSTIKRVSTP-TETSTYDSVVCEEDIA 484
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+V+AWTGIPV K+S ES++LL ME+TLH R+IGQ++AV A+SRAIRRARVGL+NPNRP
Sbjct: 485 GVVAAWTGIPVNKLSKTESEKLLLMEDTLHSRIIGQEQAVSAVSRAIRRARVGLRNPNRP 544
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL KALA Y+FG+E++M+RLDMSE+MERHTV+KLIGSPPGYVGY+
Sbjct: 545 IASFMFSGPTGVGKTELTKALALYFFGAEDSMVRLDMSEYMERHTVAKLIGSPPGYVGYS 604
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRR+PYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRT+DFKNT++I+T
Sbjct: 605 EGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTMIILT 664
Query: 681 SNVGSSVIEK---GGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
SNVG+ VIE+ G +GFD D D DS Y+R+ LV EELK++FRPEFLNRLDE+IV
Sbjct: 665 SNVGAKVIEQSTTSGGGLGFDSPDSDNTDSQYSRMAELVNEELKRFFRPEFLNRLDEVIV 724
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
F+QLTK ++ +IADIML ++ R + + L +T R ++ +++EG++P YGARPLRRAIM
Sbjct: 725 FQQLTKQDLSQIADIMLAQLCARTQEQQFTLNITPRAKDLLIDEGFDPVYGARPLRRAIM 784
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP 838
+LLED +A +L+ I+ V+VDV+ +T++ S AP
Sbjct: 785 KLLEDKLANTVLSEVIEPDSLVLVDVNDQKELTIIVDRSEAP 826
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKV+ML+QEE+RRLGHN++G+E +LLGL+ E GVA +VL G R
Sbjct: 1 MFERFTEKAIKVVMLSQEESRRLGHNFVGTEQILLGLIGENGGVAYKVLRTFGVTLREAR 60
Query: 151 TQVIRMVG 158
T+V R++G
Sbjct: 61 TEVERIIG 68
>gi|215400791|ref|YP_002327552.1| caseinolytic-like Clp protease [Vaucheria litorea]
gi|194441241|gb|ACF70969.1| caseinolytic-like Clp protease [Vaucheria litorea]
Length = 862
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/780 (59%), Positives = 599/780 (76%), Gaps = 30/780 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR G A FT +A K++ ++ E+ R+ H+YI +EHLLL ++ + G A +L
Sbjct: 68 GRGRGTTFPAGEIPFTPRAKKILEMSMEQGRKYNHSYINTEHLLLAIIEDTNGAANNILI 127
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN------------------------K 176
LG + ++T+V+ ++GE EA + N K
Sbjct: 128 QLGVNLLRLKTKVLELMGEIVEATATLLTSPPKSNDKNKKVGEIFVLHGQNQTDEDGVIK 187
Query: 177 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAE 236
PTLEE+ TNLT A +G LDPV+GR+ +IERV+QIL RR KNNP LIGEPGVGKTA+AE
Sbjct: 188 RPTLEEFTTNLTDAALKGNLDPVIGREKEIERVIQILSRRRKNNPILIGEPGVGKTAVAE 247
Query: 237 GLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 296
GLAQRI + P T+ KK+I LD+GLL+AGTKYRGEFEERLK+++EEI+ SD+II+ ID
Sbjct: 248 GLAQRIVQKEAPATLHDKKIIVLDVGLLLAGTKYRGEFEERLKRIVEEIQSSDDIIIVID 307
Query: 297 EVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 356
EVHTLIGAGA+EGA+DAANILKP LARGELQCIGATTLDEYR+HIEKD ALERRFQPV+V
Sbjct: 308 EVHTLIGAGASEGALDAANILKPVLARGELQCIGATTLDEYRQHIEKDAALERRFQPVQV 367
Query: 357 PEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAG 416
EPS+ ETI+ILKGLR+RYE HH+L + ALV+AA L QYI+DRFLPDKAIDLIDEAG
Sbjct: 368 DEPSITETIEILKGLRQRYEHHHQLTISTAALVAAANLGAQYIADRFLPDKAIDLIDEAG 427
Query: 417 SRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDK 476
SRVRL + +PE AREL+KELR+I + K++AVR Q+FEKAGELRDREM+ ++ I+A++
Sbjct: 428 SRVRLNNYYVPESARELDKELREILQAKDDAVRAQNFEKAGELRDREMETRSMITAIIKS 487
Query: 477 GKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 536
K + K P V E DI H+V AWTGIPV K++ +E+ +LL ME LH+RV+GQ
Sbjct: 488 QKLIKKP---VNVEKPTVEEEDIAHVVGAWTGIPVNKITKNETAKLLDMENILHQRVVGQ 544
Query: 537 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 596
+AV A+SRAIRRARVGL+NPNRPIASF+F+GPTGVGK+EL KALA+Y+FGSE++MIRLD
Sbjct: 545 SQAVTAVSRAIRRARVGLRNPNRPIASFLFAGPTGVGKTELTKALASYFFGSEDSMIRLD 604
Query: 597 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 656
MSE+ME+HTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTV+LFDE+EK HPD+FN++LQI
Sbjct: 605 MSEYMEKHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKGHPDIFNLLLQI 664
Query: 657 LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR---RIGFDLDYDEKDSSYNRIKS 713
LEDGRLTDSKGR ++FKNT++IMTSN+GSS IE+ R +GFD + +++ Y+ + +
Sbjct: 665 LEDGRLTDSKGRVINFKNTIIIMTSNLGSSAIEQQSRLEEDLGFDAITNIEETRYSMLCN 724
Query: 714 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 773
LV EELK++FRPEFLNR+DEMIVF+QLTK E+++IA IM+ ++ R + + +EL+V+++
Sbjct: 725 LVNEELKEFFRPEFLNRIDEMIVFQQLTKDEIEDIAKIMINDLVKRSEQQKLELEVSDKV 784
Query: 774 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNG 833
+ +++EEGYNP+YGARPLRRA+MRL+ED++A K L ++ + VDV+ G + V G
Sbjct: 785 KNKLIEEGYNPAYGARPLRRAVMRLIEDNIASKFLEESPEDQVRIFVDVNEFGEIVVTLG 844
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+RFTEKA++ I+L QEE+RRLGHN++G+E +LLGL+ E GVA R L++ + R
Sbjct: 1 MFDRFTEKALQAIILGQEESRRLGHNFVGTEQILLGLIGENTGVAYRALKSFRVTLKDAR 60
Query: 151 TQVIRMVG 158
+V RM+G
Sbjct: 61 LEVERMLG 68
>gi|282896226|ref|ZP_06304249.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Raphidiopsis brookii D9]
gi|281198915|gb|EFA73793.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Raphidiopsis brookii D9]
Length = 709
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/707 (66%), Positives = 584/707 (82%), Gaps = 13/707 (1%)
Query: 124 LLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEY 183
+LGL GEGVAA+VL++LG + +R++V+ ++GE V AG N+ ++EE+
Sbjct: 1 MLGLTDAGEGVAAKVLKSLGIELQTVRSRVMSILGEDNRVV-AGRQDNPRRNQNLSIEEF 59
Query: 184 GTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA 243
G NLTKLA++G+LDPVVGRQ +IER VQILGRRTKNNP LIGEPGVGKTAIAEGLAQRI
Sbjct: 60 GRNLTKLAQQGRLDPVVGRQTEIERTVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIV 119
Query: 244 SGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG 303
+ DVP+ + K+VI+LDMGLLVAGT++RG+FEERLKK+ME+I+ IIL IDE+HT++G
Sbjct: 120 NQDVPEILLNKQVISLDMGLLVAGTRFRGDFEERLKKVMEDIRSVGNIILVIDEIHTIVG 179
Query: 304 AGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDE 363
AG EG +DAANILKP+LARGELQCIGATTLDEYRK+IE+D ALERRFQP+ V EPSV E
Sbjct: 180 AGGTEGGLDAANILKPALARGELQCIGATTLDEYRKYIERDAALERRFQPILVGEPSVAE 239
Query: 364 TIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRH 423
TI+IL+GLR YE HHK+ +D+A+++AA+LS +YISDRFLPDKAIDLIDEAGSRVRLRH
Sbjct: 240 TIEILRGLRSAYEQHHKVNISDDAVIAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRH 299
Query: 424 AQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKA 483
+++ + +EL+++L+ ++EK EAVR QDF KA +LR E+DL+ Q++ A
Sbjct: 300 SRIIDN-KELKQQLKNTSQEKAEAVRVQDFGKASKLRQEELDLQTQLAI----------A 348
Query: 484 ETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAI 543
+ P V E DI IVS+WTG+PV K++ ES+ LL +E+TLHKR+IGQ++AV A+
Sbjct: 349 QNLPRITIPQVDEEDIAEIVSSWTGVPVNKLTESESELLLHLEDTLHKRLIGQEQAVTAV 408
Query: 544 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 603
SR++RRARVGLK+PNRPIASFIFSGPTGVGK+ELAKALAAY+FG+E++MIRLDMSE+ME
Sbjct: 409 SRSLRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEDSMIRLDMSEYMES 468
Query: 604 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 663
H VSKLIGSPPGYVGY EGGQLTEAVRR+PYT++LFDEIEKAHPDVFNM+LQIL+DG LT
Sbjct: 469 HNVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTLLLFDEIEKAHPDVFNMLLQILDDGHLT 528
Query: 664 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYF 723
D+KGR VDFKNTL+I+TSN+GS +IEKGG +GF+ D ++ ++SYNRI++LV EELK YF
Sbjct: 529 DAKGRKVDFKNTLIILTSNIGSKLIEKGGMSLGFEFD-NQANASYNRIRNLVNEELKSYF 587
Query: 724 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYN 783
RPEFLNR+DE+IVF QL K EVKEI+ IML+EV RL+ K I+L+VTE F++ VV EGY+
Sbjct: 588 RPEFLNRVDEIIVFSQLNKDEVKEISQIMLEEVAKRLQEKGIKLEVTEAFKDLVVTEGYD 647
Query: 784 PSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
PSYGARPLRRAIMRLLEDS+AE +L+ EI E D IVDVD DG V V
Sbjct: 648 PSYGARPLRRAIMRLLEDSLAEAILSGEIGEDDQAIVDVDDDGLVKV 694
>gi|403225132|gb|AFR24744.1| ATP-dependent clp protease ATP-binding subunit [uncultured
Pelagomonas]
Length = 833
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/762 (61%), Positives = 604/762 (79%), Gaps = 7/762 (0%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV A+ FT +A +V+ +A EEAR LGH YIG+EH+LL LL E GV RVL+
Sbjct: 68 GRGSGFV--AVEIPFTPRAKRVLEIAIEEARDLGHGYIGTEHILLALLEEEVGVGVRVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
LG S IRT+++ +GE+ EAV G +EE+ TNLT+ A G LDPVV
Sbjct: 126 QLGLVISQIRTELLIQIGENIEAVAPGDKSDQFDMGGLAIEEFTTNLTETAYNGNLDPVV 185
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I RV+QIL RR KNNP LIGEPGVGKTA+AEGLAQRI DVP ++ K+VI+LD
Sbjct: 186 GRDDEISRVIQILARRRKNNPVLIGEPGVGKTAVAEGLAQRIVERDVPALLDDKQVISLD 245
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLL+AGTKYRGEFEERLK++++EI+ S+ IIL IDEVHTLIGAGAAEGA+DAANILKP+
Sbjct: 246 VGLLLAGTKYRGEFEERLKRIVDEIRSSENIILVIDEVHTLIGAGAAEGAVDAANILKPA 305
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQC+GATT++EYRKHIE+D ALERRFQPV+VPEPSVD+T+ IL+ LR RYE HH
Sbjct: 306 LARGELQCLGATTVEEYRKHIERDSALERRFQPVQVPEPSVDDTVDILRCLRARYERHHG 365
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
L+ D+AL +A+++ QYI+DRFLPDKAIDLIDEA +RVRLR + P+ A L++ELR +
Sbjct: 366 LKIGDDALEAASRMGAQYIADRFLPDKAIDLIDEACARVRLRATRTPDSATGLKRELRDV 425
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
KEK A+R QDFE+A ++ DRE++++AQ++ ++ K +S ++ E +V E DI
Sbjct: 426 MKEKETAIREQDFERAADILDREIEIRAQLNIILSTVKRVSSSK-ETPTYESIVCEDDIA 484
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
H+V+AWTGIPV K+S ES++LL ME+TLH R+IGQ++AV A+S+AIRRARVGL+NPNRP
Sbjct: 485 HVVAAWTGIPVNKLSKTESEKLLVMEDTLHSRIIGQEQAVSAVSKAIRRARVGLRNPNRP 544
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
IASF+FSGPTGVGK+EL KALA ++FG+E++M+RLDMSE+MERHTV+KLIGSPPGYVGY+
Sbjct: 545 IASFLFSGPTGVGKTELTKALALFFFGAEDSMVRLDMSEYMERHTVAKLIGSPPGYVGYS 604
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTEAVRR+PYTVVLFDEIEK HPDVFN++LQILEDGRLTDSKGRT+DFKNT++I+T
Sbjct: 605 EGGQLTEAVRRKPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTIDFKNTMIILT 664
Query: 681 SNVGSSVIEKG---GRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
SNVG+ I+ G +GFD D +++DS Y R+ LV EELK++FRPEFLNRLDE+I+
Sbjct: 665 SNVGAKAIQNAAGSGSGLGFDSPDTNDEDSEYTRMAELVNEELKRFFRPEFLNRLDEVII 724
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
F+QLTK ++ +IADIML ++ R K ++ L VT R ++ +++EG++P YGARPLRRAIM
Sbjct: 725 FQQLTKRDLGQIADIMLAQLCARTKDQNFTLNVTPRAKDLLIDEGFDPIYGARPLRRAIM 784
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAP 838
+LLED +A+ +L+ I+ V+VDV+ + ++++ S P
Sbjct: 785 KLLEDKLAQTVLSESIEPDSLVLVDVNDNRELSIVVDHSSIP 826
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTEKAIKV+ML+QEE+RRLGHN++G+E +LLGL+ E GVA +VL G R
Sbjct: 1 MFERFTEKAIKVVMLSQEESRRLGHNFVGTEQILLGLVGENGGVAYKVLRTFGVTLREAR 60
Query: 151 TQVIRMVG 158
T+V R++G
Sbjct: 61 TEVERIIG 68
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/741 (63%), Positives = 595/741 (80%), Gaps = 10/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A +V+ L+ +EARR+GHNY+G+EHLLLGL+REGEGVAA++L GAD +RT V
Sbjct: 80 LTPRAKRVLELSVDEARRMGHNYVGTEHLLLGLIREGEGVAAQILNAFGADYRKVRTIVA 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++ G + G V G G + PTL+++G +LT LA E KLDPVVGR+ +IERV+Q+L
Sbjct: 140 QLHGGQAQPAGQ-VPGKFKGGQTPTLDQFGRDLTALAREDKLDPVVGREKEIERVIQVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ + K+V+TLDMG LVAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGNVPEILANKRVVTLDMGSLVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK++EEI+Q+ II+FIDE+HTL+GAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 259 EERLKKVIEEIRQAGNIIMFIDELHTLVGAGAAEGAIDAANILKPALARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQP+ V EP+V+ETIQIL+GLR++YE HH++R TD AL +AA+L
Sbjct: 319 DEYRKHIEKDAALERRFQPITVVEPTVEETIQILRGLRDKYEAHHRVRITDAALEAAAKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDL+DEAGSRVRL+ P + +ELEK+L + KEK AV GQ+FE
Sbjct: 379 SSRYITDRFLPDKAIDLVDEAGSRVRLQAFVPPPDLKELEKKLEVLQKEKEAAVNGQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ELRD+E ++A++ +L + K+ G VV E DI HIVS+WTGIPV+K+
Sbjct: 439 KAAELRDQEQKVRAELESLRESWKQRQ------GGTELVVDEEDIAHIVSSWTGIPVKKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLLKMEE LH+RV+GQDEA++A+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AEEESERLLKMEEVLHQRVVGQDEAIRAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FGSE+AM+R+DMSE+ME+ VS+L+G+PPGYVGY EGGQLTEAVRRRPY
Sbjct: 553 TELARALAEVLFGSEDAMVRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
TVVL DEIEKAHPDVFN++LQ++EDGRLTD+KGRTVDF+NT++IMTSNVG I++
Sbjct: 613 TVVLLDEIEKAHPDVFNILLQVMEDGRLTDAKGRTVDFRNTVIIMTSNVGIQTIKREA-T 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D+K+ Y +KS V EEL++ FRPEFLNR+DE+IVF LT ++EI D+MLK
Sbjct: 672 LGFRTG-DQKEKGYEAMKSKVMEELRRTFRPEFLNRVDEIIVFHALTPEHIREIVDLMLK 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
EV R+K +IE++VT+ ++ + +EG++ +YGARPLRRA+ R++ED ++E L K
Sbjct: 731 EVAARMKENEIEIEVTDAAKDLLAKEGFDEAYGARPLRRAVQRMVEDRLSEDFLKGVFKR 790
Query: 815 GDSVIVDVDSDGNVTVLNGSS 835
GD V +D D G +T+L SS
Sbjct: 791 GDRVQIDSDGSG-LTILKISS 810
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 52/67 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA+ + Y+G+EHLLLGL+REGEGVAAR L +LG D +R
Sbjct: 1 MFGRFTERAQKVLMFAQEEAKSASYPYVGTEHLLLGLIREGEGVAARALASLGVDADKVR 60
Query: 151 TQVIRMV 157
T V +MV
Sbjct: 61 TAVAQMV 67
>gi|75271088|sp|Q53N47.1|CLPC4_ORYSJ RecName: Full=Chaperone protein ClpC4, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 4; AltName: Full=Casein lytic proteinase C4;
Flags: Precursor
gi|62734338|gb|AAX96447.1| ATPase, AAA family, putative [Oryza sativa Japonica Group]
gi|77549763|gb|ABA92560.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 918
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/764 (61%), Positives = 606/764 (79%), Gaps = 35/764 (4%)
Query: 73 LSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGE 132
+S + K + FV +A+ + F+ + + I +A +EA+ + H IGS ++LL L+ +
Sbjct: 176 VSQKTTKVPKQPRFVARAI-DNFSREVMNAIAVAHDEAQYIAHLTIGSTNILLSLI--SQ 232
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
+ +LE + + ++ + A V + G K+ TL EYGTNLTKLAE
Sbjct: 233 YICIFLLEII--------------LNKAYKMFRAAVRRATRGAKLATLMEYGTNLTKLAE 278
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
EGKLDPVVGRQ QI+ VVQIL RRTKNNPCLIGEPGVGKTAIAEGLAQ IA+GDVP+TI+
Sbjct: 279 EGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQ 338
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K VI+LDMGLL+AGTKYRGE EERLK ++EEIKQ+ EIILF+DEVHTL+ AG+AEGAID
Sbjct: 339 QKTVISLDMGLLLAGTKYRGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGAID 398
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANI KP+LARGELQCIGATT++EYRKHIEKD ALERRFQPVK+PE +VDET+ ILKGLR
Sbjct: 399 AANIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVKIPESTVDETVGILKGLR 458
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL--PEEA 430
ERY+ HHK++YTDEALV+AA+LS+++I DRFLPDKAIDL+DEAGS VRLR+AQ ++
Sbjct: 459 ERYQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQCKPSKKV 518
Query: 431 RELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV 490
+LE EL++ KEKN+A+ Q+F +A +LRD E+ L+ ISAL DK +M + + A
Sbjct: 519 NDLEAELKKTLKEKNDAISIQNFRRAKQLRDHELQLRTNISALTDKKTQMMEPDAIA--- 575
Query: 491 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
PVVTE D++H +S WTG+P+ KVS DES +LLK+EE LH+RV+GQ EAV A+SRAIRRA
Sbjct: 576 MPVVTEDDVRHAISRWTGVPLHKVSMDESRKLLKLEEALHRRVVGQGEAVAAVSRAIRRA 635
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE----AMIRLDMSEFMERHTV 606
R+GLK+P RP+AS +F+GPTGVGKSELAKALAAYY+GS E AM+RLDMSE+ME+H V
Sbjct: 636 RLGLKHPGRPVASLVFAGPTGVGKSELAKALAAYYYGSSESEEAAMVRLDMSEYMEKHAV 695
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
++L+GSPPGYV + EGGQLTEAVRRRP+ VVL DE+EKAH DVF+++LQ+L+DGRLTD K
Sbjct: 696 ARLVGSPPGYVWHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGK 755
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 726
GRTVDFKNTL++MT+N+GSS+I + + ++ RIK+ VT+E+K++FRPE
Sbjct: 756 GRTVDFKNTLIVMTTNIGSSLIVN---------NGGDGAAAAGRIKNTVTDEMKRHFRPE 806
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+I+F+ LT+LEV +IA IML+E R++ K I+L+VT++FRE VVEEG++PSY
Sbjct: 807 FLNRLDEVIMFQPLTELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSY 866
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA++RLLED++AEKMLA E++EGDSVIVD DS GN V
Sbjct: 867 GARPLRRAVVRLLEDTLAEKMLAGEVREGDSVIVDADSAGNAVV 910
>gi|428305782|ref|YP_007142607.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428247317|gb|AFZ13097.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 815
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/751 (64%), Positives = 611/751 (81%), Gaps = 15/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR FV + + T K ++ A E+++LGHNYI EHLLLGLL EGEGVA RVL+
Sbjct: 68 GRGSRFVPEQI--PVTPKVKRIFDQALIESQQLGHNYISPEHLLLGLLNEGEGVATRVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVG-AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
NLG D ++ V++ + + EA G S NK P L+E+GT+LT+LA +GKLDPV
Sbjct: 126 NLGVDLKELQLAVLKQL--TVEAPAEVGTTRQRSQNKTPILDEFGTDLTELAAKGKLDPV 183
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IER +QILGRRTKNNP LIGEPGVGKTAIAEGLAQRI + +VP T+E K+VI+L
Sbjct: 184 VGREREIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINKNVPGTLEDKQVISL 243
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
DMG LVAGTK+RGEFEERLK ++EE++ S IIL IDE+H +IG G+ +G +DAAN+LKP
Sbjct: 244 DMGSLVAGTKFRGEFEERLKGIVEEVRSSGNIILVIDELHNIIGTGSVQGGLDAANMLKP 303
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQCIG TTLDEYRKHIEKD ALERRFQP+KV EPSV ETI+IL GLRE YE H
Sbjct: 304 ALARGELQCIGMTTLDEYRKHIEKDAALERRFQPIKVGEPSVVETIEILFGLREAYEQFH 363
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
K++ +D+A+ +AA+LS QYISDRFLPDKAIDLIDEAGSR+R+++ P REL++ELRQ
Sbjct: 364 KVKISDDAIDAAAKLSDQYISDRFLPDKAIDLIDEAGSRLRVQNTMSPAH-RELKRELRQ 422
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
++K K EAV+ QDF++AG+LRD+E++L+ Q+ K+M+ ++ ++ D+ PVV I
Sbjct: 423 VSKAKQEAVQVQDFDQAGKLRDKELELEGQL-------KKMATSQ-DSADI-PVVDAEKI 473
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV+ WTG+PV K++ ES +LL +E+TLH+R+IGQD+AV A+S+AIRRARVGLK+PNR
Sbjct: 474 AEIVAVWTGVPVSKLTESESAKLLDLEDTLHQRLIGQDQAVTAVSKAIRRARVGLKSPNR 533
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PIASFIFSGPTGVGK+ELAKALAA++FGSEEAMIR+DMSE+ME HTVSKLIGSPPG+VGY
Sbjct: 534 PIASFIFSGPTGVGKTELAKALAAHFFGSEEAMIRVDMSEYMESHTVSKLIGSPPGFVGY 593
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPY+V+LFDEIEKAHPDVFNMMLQ+L+DGRLTD++GRTVDFKNTL+I+
Sbjct: 594 DEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNMMLQMLDDGRLTDAQGRTVDFKNTLIIL 653
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSN+GS VIEKGG +GF+ D+ +++YNR++ V EELK YFRPEFLNRLD++IVFRQ
Sbjct: 654 TSNLGSKVIEKGGSGLGFEFSEDQAEATYNRMQQRVQEELKAYFRPEFLNRLDDIIVFRQ 713
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LT EV+ IA IML+EV RL ++I L+VT++F++RVV+EG+NP +GAR LRRAIMRLL
Sbjct: 714 LTFEEVRSIAGIMLREVASRLTEQEISLEVTDKFKDRVVKEGFNPKFGARELRRAIMRLL 773
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
EDS+AE ML+ + GD+ ++DV DG V +
Sbjct: 774 EDSLAEAMLSGTVNSGDTAVIDVGEDGEVEI 804
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFER T+KA+KVI++AQEE RRLGH +G+E +LLGL+ EG VAA++L GA+ R
Sbjct: 1 MFERLTDKAVKVIIVAQEETRRLGHTLVGTEQILLGLIGEGTSVAAKILVERGANLQKAR 60
Query: 151 TQVIRMVGESTEAV 164
+V +++G + V
Sbjct: 61 KEVEKIIGRGSRFV 74
>gi|335039209|ref|ZP_08532387.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180907|gb|EGL83494.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
Length = 811
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/741 (61%), Positives = 587/741 (79%), Gaps = 11/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA+ A GG G PTL+ +LT +A+ +LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SNEAMAATPQGGQGGASTPTLDSLARDLTAIAKNDELDPVIGRDKEIERVIQVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI + ++P+T+ GK+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVNNEIPETLRGKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V PS+++TI IL+GLR+RYE HH+++ TDEA+ A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIMVDPPSIEDTILILRGLRDRYEAHHRVKITDEAIEQAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRL+ +P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLKSYTVPPNLKELEQKLEEVRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ ++ KE + G VT DI IVS+WTGIPV+K+
Sbjct: 439 KAASLRDTEQKLREELEKTKNEWKE------KQGQTDSEVTAEDIADIVSSWTGIPVKKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL MEE LH+RVIGQDEAVKAIS+AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQEESERLLNMEEILHERVIGQDEAVKAISKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELAKALA FG E A+IR+DMSE+ME+HT S+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELAKALAESLFGDENAVIRIDMSEYMEKHTTSRLIGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFKNT++IMTSNVG+ ++ K G
Sbjct: 613 SVILLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFKNTVIIMTSNVGAELLRK-GTT 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + ++ +Y +K V ELK+ FRPEFLNR+DE+IVF L + + +I D+M K
Sbjct: 672 LGF--QAENREQNYQNMKEKVMGELKRMFRPEFLNRIDEVIVFHSLEEEHLMQIVDLMAK 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +DIE +TE + +V+EGY+P YGARPLRRA+ R++ED ++E++L I +
Sbjct: 730 QLQKRLKEQDIEFTLTEEAKRHIVKEGYDPQYGARPLRRALQRMVEDRLSEELLQGNISK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSS 835
GDSV++DV+ DG + VL S
Sbjct: 790 GDSVVIDVE-DGQLKVLKKES 809
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ L D IR
Sbjct: 2 MFGRFTERAQKVLALAQEEAMRLGHNNIGTEHILLGLVREGEGIAAKALQALNLDMEKIR 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G T+
Sbjct: 62 KEVETLIGRGTQTT 75
>gi|254425327|ref|ZP_05039045.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196192816|gb|EDX87780.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 822
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/746 (61%), Positives = 587/746 (78%), Gaps = 23/746 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT K +V A +EAR+L H YI EHLLL L + E VA RV+ NL DP IR Q++
Sbjct: 80 FTPKVKQVFEQAFQEARKLDHPYIEPEHLLLSLTQNSESVAYRVIANLDVDPEKIRVQLV 139
Query: 155 RMVGESTEAVGAGVGGGSSGNK---MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
R++GEST VGG + L EYGT+LT++A EGKLDPV+GR+ +IERVVQ
Sbjct: 140 RVIGESTPVASGRVGGSQKKERKSDSSVLTEYGTDLTEVAAEGKLDPVIGRRQEIERVVQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+LGRRTKNNP L+GEPGVGKTAIAEGLAQRI + DVP+ + K+VI+LDMGLLV+GT++R
Sbjct: 200 VLGRRTKNNPVLVGEPGVGKTAIAEGLAQRIVNQDVPEALIDKRVISLDMGLLVSGTRFR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEER+ ++++E+++S ++IL IDE+HTL+GAG+ EG +DAAN+LKP+LARGE+QCIGA
Sbjct: 260 GDFEERITQVIDEVRKSQDVILVIDEIHTLVGAGSLEGGMDAANLLKPALARGEMQCIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKHIEKD ALERRFQPV + PSV++T++IL GLR RYE H+L TDEA+ +A
Sbjct: 320 TTLDEYRKHIEKDAALERRFQPVTIAPPSVEDTVEILYGLRSRYEQFHRLNITDEAVEAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ-LPEEARELEKELRQITKEKNEAVRG 450
A LS +YI+DR LPDKAIDLIDEAGSRVRLR+++ +P A EL ELRQ+ K EAV+
Sbjct: 380 ATLSDRYITDRHLPDKAIDLIDEAGSRVRLRYSRNIP--ASELRSELRQVQKNILEAVQQ 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG----PVVTEVDIQHIVSAW 506
QD+++A LR +E L +I +T GDV P V++ DI IVS+W
Sbjct: 438 QDYDQAVTLRQKESALTQKIQ------------DTLEGDVSIINQPEVSDEDIADIVSSW 485
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+PV ++ ES ++ +E+TLH+RV+GQDEAV+A+SRA+RRARVGL+ +RPIAS +F
Sbjct: 486 TGVPVNAITETESAMMMHLEQTLHERVVGQDEAVEAVSRAVRRARVGLRGLDRPIASLVF 545
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
SGPTGVGK+ELAKALA+ FGSEEAMIRLDMSEFME HTVSKLIGSPPG+VGY EGGQLT
Sbjct: 546 SGPTGVGKTELAKALASAVFGSEEAMIRLDMSEFMESHTVSKLIGSPPGFVGYDEGGQLT 605
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
EAVRRRPY+V+L DEIEKAHPDVFN++LQ+L+DG L+DSKGR V FKNTL+IMTSN+GS
Sbjct: 606 EAVRRRPYSVILMDEIEKAHPDVFNILLQVLDDGHLSDSKGREVSFKNTLIIMTSNIGSK 665
Query: 687 VIEKGGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
VIEKGG +GF+L + D S YN I++LV EE+KQ+FRPE +NR+DE+IVFRQLTK EV
Sbjct: 666 VIEKGGGGLGFELTEEDSMTSRYNNIRNLVNEEMKQFFRPEMINRIDEIIVFRQLTKAEV 725
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
KEIA+I+LK+V +RL +++ +TE F++R+VEEGY+ YGARP+RRAI RL+ED +AE
Sbjct: 726 KEIAEILLKQVGERLGDRNLSFDMTEAFKDRLVEEGYDQRYGARPMRRAISRLVEDRLAE 785
Query: 806 KMLAREIKEGDSVIVDVDSDGNVTVL 831
+LA +++GD+V+ D+D DG +T L
Sbjct: 786 AILAGTLQDGDTVVFDIDKDGEITAL 811
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT AI VIM AQEEARRLGHN++GSE LLLG+++E +AA+VL+ G + +N R
Sbjct: 1 MFEHFTNTAIAVIMQAQEEARRLGHNFVGSEQLLLGIIKENTSIAAKVLDEFGINLANAR 60
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 61 TEVESIIG 68
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/738 (62%), Positives = 587/738 (79%), Gaps = 11/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A +V+ LA +EARR+GHNY+G+EHLLLGL+REGEGVAAR L +LGAD + +R+ ++
Sbjct: 81 LTPRAKRVLELAVDEARRMGHNYVGTEHLLLGLIREGEGVAARALASLGADLNKVRSVIM 140
Query: 155 RMVGESTEAVGAGVGGGS--SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+M+G + G G + + PTL+++G +LT LA + KLDPVVGR+ +IERV+QI
Sbjct: 141 QMLGGAAGGPVPGQPGTARPQASSTPTLDQFGRDLTALARDDKLDPVVGREKEIERVIQI 200
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTAIAEGLAQRI G+VP+ + K+V+TLD+ +VAGTKYRG
Sbjct: 201 LSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGNVPEVLLNKRVVTLDLASMVAGTKYRG 260
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEER+KK+++EI ++ II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGAT
Sbjct: 261 EFEERIKKVIDEIIKAGNIIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 320
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKHIE+DPALERRFQP+ V EP+V+ETI ILKGLR++YE HH++R TDEAL +AA
Sbjct: 321 TLDEYRKHIERDPALERRFQPIMVEEPTVEETIAILKGLRDKYEAHHRVRITDEALEAAA 380
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YI+DRFLPDKAIDL+DEA SRVRLR P ++LEK + +I KEK AV Q+
Sbjct: 381 RLSDRYITDRFLPDKAIDLVDEASSRVRLRAFTAPPNLKDLEKRIEEIQKEKEAAVNNQE 440
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA +LRD+E LK ++ A + G VVTE DI IVS+WTGIPV+
Sbjct: 441 FEKAAQLRDQEQQLKKELEA------RRQDWQAARGKEELVVTEEDIAQIVSSWTGIPVK 494
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +E++RLL++EE LH+RV+GQDEAV+A++R++RRAR GLK+P RPI SFIF GPTGV
Sbjct: 495 KLAEEETERLLRLEEILHQRVVGQDEAVRAVARSVRRARAGLKDPKRPIGSFIFLGPTGV 554
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+ALA FG E+A++RLDMSE+MER VS+L+G+PPGYVGY EGGQLTEAVRR+
Sbjct: 555 GKTELARALAEALFGDEDALVRLDMSEYMERFAVSRLVGAPPGYVGYEEGGQLTEAVRRK 614
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG + K G
Sbjct: 615 PYTVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGVHTLRKEG 674
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF + E+++SY R+K VTEELK+ FRPEFLNR+DE+IVF LT +K+I +M
Sbjct: 675 -TLGFRTE-QEREASYERMKERVTEELKRTFRPEFLNRIDEIIVFHSLTAEHIKKIVGLM 732
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
LKEV R+K D+E++ TE RE + EG++ +YGARPLRRAI RL+ED ++E++L
Sbjct: 733 LKEVAGRMKEHDVEVEFTEAAREILAREGFDETYGARPLRRAIQRLVEDRLSEELLKGTF 792
Query: 813 KEGDSVIVDVDSDGNVTV 830
+ GD V+VD DG + V
Sbjct: 793 QRGDRVVVD-GEDGRIVV 809
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F RFT++A KV+ LAQEEARRL + Y+G+EHLLLGL+REGEGVAA+ L +LG D +R
Sbjct: 2 LFGRFTQRAQKVLFLAQEEARRLNYPYVGTEHLLLGLIREGEGVAAKTLASLGIDADKVR 61
Query: 151 TQVIRMV 157
V +MV
Sbjct: 62 ATVEQMV 68
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/736 (63%), Positives = 587/736 (79%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KV+ LA +EAR+LGHNYIG+EHLLLGL+REGEGVAARVL NLG D +++ VI
Sbjct: 80 LTPRAKKVLELAFDEARKLGHNYIGTEHLLLGLIREGEGVAARVLHNLGVDFQSVQKSVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
M+G + G G N PTL E+G +LT++A EGKLDPVVGR+ +IERVVQ+L
Sbjct: 140 NMLGTAQPHGGPAQPGKKQAN-TPTLNEFGRDLTEMAREGKLDPVVGREKEIERVVQVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+T+ K+V+TLDM +VAGTK+RGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGNVPETLNDKRVVTLDMASVVAGTKFRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+++EI+ + +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGATTL
Sbjct: 259 EDRLKKVIDEIRAAGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIE+DPALERRFQP+ V EP+V+E+I ILKGLR+RYE HH+++ TDEA+ SA +L
Sbjct: 319 DEYRKHIERDPALERRFQPITVDEPTVEESIDILKGLRDRYEAHHRVQITDEAINSAVRL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA SRVRL+ +P + ++LE EL +I KEK A+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASRVRLQTFTVPPDVKKLEAELEEIKKEKEAAISAQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E LKA++ KG E K G VTE DI HIVS+WTGIPV K+
Sbjct: 439 KAAGLRDKEQKLKAKLED-TKKGWEEKK-----GLAKKAVTEDDIAHIVSSWTGIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+ RLL MEE LH+RVIGQDEAVKA+SRA+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQEETTRLLNMEEILHQRVIGQDEAVKAVSRAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AM+R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+PY
Sbjct: 553 TELARALAEALFGDEDAMVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG+ +I+K
Sbjct: 613 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGAHLIKKEA-T 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF +D++Y+ ++ VT ELK+ FRPEFLNR+DE+IVF L K +K+I ++MLK
Sbjct: 672 LGF--KTTAQDTNYDNMRERVTGELKRTFRPEFLNRIDEIIVFHSLKKEHIKKIVELMLK 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
EV +R+K DIE++VT+ +E + +EG++ +GARPLRRAI + +ED ++E+ L K
Sbjct: 730 EVAERMKENDIEIEVTDEAKELLAKEGFDEMFGARPLRRAIQKTVEDQLSEEFLKGTFKP 789
Query: 815 GDSVIVDVDSDGNVTV 830
GD V+V DG + V
Sbjct: 790 GDKVVVTA-KDGQIVV 804
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 58/69 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+MLAQEEA+RL + Y+G+EH+LLGL++EG G+AA+VL LG D + +R
Sbjct: 1 MFARFTERAQKVLMLAQEEAKRLNYTYVGTEHILLGLIQEGSGIAAKVLYELGVDFNKVR 60
Query: 151 TQVIRMVGE 159
++V +M+G+
Sbjct: 61 SEVEKMIGK 69
>gi|323703791|ref|ZP_08115429.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531260|gb|EGB21161.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 818
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/742 (61%), Positives = 594/742 (80%), Gaps = 11/742 (1%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A +V+ LA EE+R LGHNY+G+EHLLLGL+REGEGVAA+VL++LGAD +R Q+I
Sbjct: 81 TPRAKRVLELAVEESRMLGHNYVGTEHLLLGLIREGEGVAAQVLKSLGADLDRVRQQIIN 140
Query: 156 MVGESTEAVGAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
M+G + G G S G K +L+++G +LT LA+EGKLDPVVGR +IERV+Q+
Sbjct: 141 MLGGAPGGAAPGGQGQSCPAGGCKTVSLDQFGRDLTGLAKEGKLDPVVGRAKEIERVIQV 200
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTAIAEGLAQRI G+VP+ + ++V+TLD+ +VAGTKYRG
Sbjct: 201 LSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVEGNVPEILLNRRVVTLDLAGMVAGTKYRG 260
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFE+RLKK+MEEI+Q+ +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGAT
Sbjct: 261 EFEDRLKKIMEEIRQAGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGAT 320
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK+IEKDPALERRFQP++V EP+V+ETIQIL+G+R++YE HH++R TDEA+ +AA
Sbjct: 321 TLDEYRKYIEKDPALERRFQPIQVDEPTVEETIQILQGIRDKYEAHHRVRITDEAITAAA 380
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YI+DRFLPDKAIDLIDEA SRVR++ P + ++ EKEL + KEK A+ Q+
Sbjct: 381 RLSDRYITDRFLPDKAIDLIDEAASRVRIKAFTAPPDLKDKEKELEALRKEKEAAINNQE 440
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA ELRDRE L +++ ++ +E S + + GD G VVTE DI IVS+WTG+PV+
Sbjct: 441 FEKAAELRDREQVLMSEL----NQARE-SWNQAKGGD-GLVVTEEDIAGIVSSWTGVPVQ 494
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +ES++LL +EE LH+RV+GQD+AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGV
Sbjct: 495 KLAQEESEKLLNLEEVLHQRVVGQDDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGV 554
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+ALA FG E+A++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+
Sbjct: 555 GKTELARALAEALFGDEDALVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRK 614
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG S I+ G
Sbjct: 615 PYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGLSTIKSVG 674
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
R+GF D+ ++ Y ++K V E LK+ FRPEFLNR+DE IVF L + +K+I +M
Sbjct: 675 -RVGFAAQADQNEAEYEKMKERVEEALKRTFRPEFLNRIDETIVFHPLNREHIKQIVGLM 733
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
LKEV R++ ++ ++ TE +E++ E GY+ YGARPLRR I R +ED ++E+++
Sbjct: 734 LKEVAKRMEEHEVYVEFTEAAKEKLAEIGYSEEYGARPLRREIQRKVEDRLSEELIKGTF 793
Query: 813 KEGDSVIVDVDSDGNVTVLNGS 834
K+GD V++DV+ +G TV S
Sbjct: 794 KKGDKVVIDVE-NGEFTVRQAS 814
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+RFTE+A V++LAQEEARRL + IG+EH+LLGL+++G+ AA+ LE LG +
Sbjct: 1 MFQRFTERAKHVLVLAQEEARRLRYPNIGTEHILLGLIKQGDSFAAKALEQLGITADKVS 60
Query: 151 TQVIRMVGESTEAV 164
+ +MV + T+ +
Sbjct: 61 AVLEQMVEKGTQPI 74
>gi|333922411|ref|YP_004495991.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333747972|gb|AEF93079.1| ATPase AAA-2 domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 818
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/742 (61%), Positives = 595/742 (80%), Gaps = 11/742 (1%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A +V+ LA EE+R LGHNY+G+EHLLLGL+REGEGVAA+VL++LGAD +R Q+I
Sbjct: 81 TPRAKRVLELAVEESRMLGHNYVGTEHLLLGLIREGEGVAAQVLKSLGADLDRVRQQIIN 140
Query: 156 MVGESTEAVGAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
M+G + G G S G K +L+++G +LT LA+EGKLDPVVGR +IERV+Q+
Sbjct: 141 MLGGAPGGAAPGGQGQSCPAGGCKTVSLDQFGRDLTGLAKEGKLDPVVGRAKEIERVIQV 200
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTAIAEGLAQRI G+VP+ + ++V+TLD+ +VAGTKYRG
Sbjct: 201 LSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVEGNVPEILLNRRVVTLDLAGMVAGTKYRG 260
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFE+RLKK+MEEI+Q+ +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGAT
Sbjct: 261 EFEDRLKKIMEEIRQAGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGAT 320
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK+IEKDPALERRFQP++V EP+V+ETIQIL+G+R++YE HH++R TDEA+ +AA
Sbjct: 321 TLDEYRKYIEKDPALERRFQPIQVDEPTVEETIQILQGIRDKYEAHHRVRITDEAITAAA 380
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YI+DRFLPDKAIDLIDEA SRVR++ P + ++ EKEL + KEK A+ Q+
Sbjct: 381 RLSDRYITDRFLPDKAIDLIDEAASRVRIKAFTAPPDLKDKEKELEALRKEKEAAINNQE 440
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA ELRDRE L +++ ++ +E S +T+ GD G VVTE DI IVS+WTG+PV+
Sbjct: 441 FEKAAELRDREQVLMSEL----NQARE-SWNQTKGGD-GLVVTEEDIAGIVSSWTGVPVQ 494
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +ES++LL +EE LH+RV+GQD+AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGV
Sbjct: 495 KLAQEESEKLLNLEEVLHQRVVGQDDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGV 554
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+ALA FG E+A++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+
Sbjct: 555 GKTELARALAEALFGDEDALVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRK 614
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG S I+ G
Sbjct: 615 PYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGLSTIKSVG 674
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
R+GF ++ ++ Y ++K V E LK+ FRPEFLNR+DE IVF L + +K+I +M
Sbjct: 675 -RVGFAAQAEQNEAEYEKMKERVEEALKRTFRPEFLNRIDETIVFHPLNREHIKQIVGLM 733
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
LKEV R++ ++ ++ TE +E++ E GY+ YGARPLRR I R +ED ++E+++
Sbjct: 734 LKEVAKRMEEHEVYVEFTEAAKEKLAEIGYSEEYGARPLRREIQRKVEDRLSEELIKGTF 793
Query: 813 KEGDSVIVDVDSDGNVTVLNGS 834
K+GD V++DV+ +G TV S
Sbjct: 794 KKGDKVVIDVE-NGEFTVRQAS 814
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+RFTE+A V++LAQEEARRL + IG+EH+LLGL+++G+ AA+ LE LG +
Sbjct: 1 MFQRFTERAKHVLVLAQEEARRLRYPNIGTEHILLGLIKQGDSFAAKALEQLGITADKVS 60
Query: 151 TQVIRMVGESTEAV 164
+ +MV + T+ +
Sbjct: 61 AVLEQMVEKGTQPI 74
>gi|403071334|ref|ZP_10912666.1| ATP-dependent Clp protease [Oceanobacillus sp. Ndiop]
Length = 809
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/738 (60%), Positives = 575/738 (77%), Gaps = 10/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV+ L+Q+EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVVELSQDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVG-AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+++G + G G G S PTL+ +LT A+EGK+DPV+GR +IERV+Q+L
Sbjct: 140 QLLGSNESQAGRQGRTGQQSNASTPTLDSLARDLTVSAKEGKIDPVIGRAKEIERVIQVL 199
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTA+AEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGE
Sbjct: 200 SRRTKNNPVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDKRVMTLDMGTVVAGTKYRGE 259
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATT
Sbjct: 260 FEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATT 319
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+++ETIQIL GLR+RYE HH++ TDEA+ +AA
Sbjct: 320 LDEYRKYIEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAAT 379
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DRFLPDKAIDLIDEAGS+VRL +P +ELE++L ++ KEK+ AV+ Q+F
Sbjct: 380 LSDRYITDRFLPDKAIDLIDEAGSKVRLHSYTVPPNLKELEQKLEEVRKEKDAAVQSQEF 439
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD E + ++ D+ KE + G VT DI +VS WTG+PV K
Sbjct: 440 EKAASLRDSEQRFREELEKTKDEWKE------KQGQTDSEVTVEDIASVVSIWTGVPVSK 493
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ DES+RLL ME LH RVIGQ EAV A+S+AIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 494 LTKDESERLLNMESVLHNRVIGQSEAVDAVSKAIRRARAGLKDPKRPIGSFIFLGPTGVG 553
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA F EEAMIR+DMSE+MERH S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 554 KTELARALAEVMFADEEAMIRIDMSEYMERHATSRLVGSPPGYVGYEEGGQLTEKVRRKP 613
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+S + K +
Sbjct: 614 YSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVIIMTSNVGASEL-KRNK 672
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+L + KD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I +ML
Sbjct: 673 YVGFNLGEENKD--YKEMKSKVMEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLML 730
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+++ RLK +DI L +T++ E++ EG++P YGARPLRR+I + +ED ++E++L I
Sbjct: 731 EQLQRRLKGQDIHLSLTDKAVEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLKESIS 790
Query: 814 EGDSVIVDVDSDGNVTVL 831
+G +V + +++ G VL
Sbjct: 791 KGQNVKIGLNNKGEFIVL 808
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RLGHN IG+EH+LLGL+REGEG+AA+ L++LG + S I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQ 61
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 62 EEVEKLIG 69
>gi|345021357|ref|ZP_08784970.1| ATP-dependent Clp protease [Ornithinibacillus scapharcae TW25]
Length = 808
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/739 (60%), Positives = 585/739 (79%), Gaps = 11/739 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV+ L+Q+EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVVELSQDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+++G S E+ A G G + N PTL+ +LT A+EG +DPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SNESQAARQGRGQASNANTPTLDSLARDLTASAKEGNIDPVIGRSKEIERVIQVL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTA+AEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGE
Sbjct: 199 SRRTKNNPVLIGEPGVGKTAVAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATT
Sbjct: 259 FEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
L+EYRK+IEKD ALERRFQP++V EP+++ETIQILKGLR+RYE HH++ TDEA+ +AA+
Sbjct: 319 LEEYRKYIEKDAALERRFQPIQVDEPTLEETIQILKGLRDRYEAHHRVTITDEAIDAAAK 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DRFLPDKAIDLIDEAGS+VRLR +P ++LE++L ++ KEK+ AV+ Q+F
Sbjct: 379 LSDRYITDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKDLEQKLEEVRKEKDAAVQSQEF 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD E L+ ++ ++ KE + G VT DI IVS WTG+PV K
Sbjct: 439 EKAASLRDSEQRLREELETTKNQWKE------KQGQEDSQVTVEDIASIVSIWTGVPVSK 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ DE++RLL +EE LH RVIGQ+EAVKAIS+AIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 493 LTKDETNRLLNLEEVLHDRVIGQEEAVKAISKAIRRARAGLKDPKRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA F E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 553 KTELARALAEAMFADEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG+S + K +
Sbjct: 613 YSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNVGASEL-KRNK 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+L+ + KD Y +KS V +ELK+ FRPEFLNR+DE IVF L K +K I +M+
Sbjct: 672 YVGFNLEEEGKD--YKDMKSKVIDELKKAFRPEFLNRIDETIVFHSLEKKHMKSIVTLMI 729
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K+V RL +DI+ +T++ E++ EG++P YGARPLRR+I + +ED M+E++L +I
Sbjct: 730 KDVQKRLAEQDIDFSLTDKAVEKIANEGFDPEYGARPLRRSIQKNIEDLMSEELLKGKIS 789
Query: 814 EGDSVIVDVDSDGNVTVLN 832
G V + +++ G +L+
Sbjct: 790 FGQKVKIGLNNKGEFIILS 808
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/731 (60%), Positives = 582/731 (79%), Gaps = 11/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E G G + N PTL+ +LT +A +GKLDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNETNGHASGSSAHAN-TPTLDSLARDLTAIARDGKLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDEPTIEESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L +I KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLEEIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE E VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDAEQKLREQLEETKKSWKEKQGKENSE------VTVEDIATVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLL +EE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETERLLNLEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ ++K +
Sbjct: 612 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKK-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ E++ + +K V EELK+ FRPEFLNR+DE+IVF L K ++K+I +M
Sbjct: 671 VGFNIQDGEQE--FKDMKGKVLEELKRAFRPEFLNRIDEIIVFHSLEKDQLKQIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK + IEL++T++ +E++ EEGY+P YGARPLRRAI + +ED ++E++L I
Sbjct: 729 QLTKRLKEQHIELELTDKAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGNIHP 788
Query: 815 GDSVIVDVDSD 825
G +V++DV+++
Sbjct: 789 GQNVVIDVENN 799
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYGLGLSPEKIQ 61
Query: 151 TQVIRMVGE 159
+V ++G+
Sbjct: 62 NEVENLIGK 70
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/738 (60%), Positives = 586/738 (79%), Gaps = 11/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+V GGG+S PTL+ +LT +A EG+LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESVSGHSGGGASHVSTPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA++ A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIIQAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEACSKVRLRSFTAPPQLKELEQKLEEVRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE E VT DI +VS+WTGIPV K+
Sbjct: 439 KAASLRDMEQRLREELEETKRAWKEKQGQENSE------VTVEDIAMVVSSWTGIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++D Y +K V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M +
Sbjct: 672 VGFNI--QDEDQKYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKQHLKEIVKLMAE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +DI+L++T+ E++V EGY+P YGARPLRRA+ + +ED ++E++L I +
Sbjct: 730 QLVKRLKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKHVEDRLSEELLKGTIAK 789
Query: 815 GDSVIVDVDSDGNVTVLN 832
G V+VDV DG VL+
Sbjct: 790 GQKVVVDV-KDGEFVVLS 806
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGHE 73
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/736 (61%), Positives = 578/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ G G S N PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESGGHQSGTAVSAN-TPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +E+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIMVDEPTPEESIQILKGLRDRYEAHHRVSITDEAIDAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTTPPNLKELEMKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDTEQRLREQLEETKKSWKE------KQGQENSEVTVEDIASVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LLK+EE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AETETEKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 612 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ E+D Y +K V EELK+ FRPEFLNR+DE+IVF L K ++EI +M
Sbjct: 671 VGFNIQDGEQD--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLREIVTLMAN 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +DI L++T+ +E++ EEGY+P YGARPLRRAI + +ED ++E++L +
Sbjct: 729 QLMKRLKEQDIHLELTDAAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGAVLT 788
Query: 815 GDSVIVDVDSDGNVTV 830
G V++DV+ DG V
Sbjct: 789 GQHVVIDVE-DGEFVV 803
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALNALGLGSEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVENLIGTGKE 73
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/736 (61%), Positives = 579/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ G G S N PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESGGHQSGTAVSAN-TPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +E+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIMVDEPTPEESIQILKGLRDRYEAHHRVSITDEAIDAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEMKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDTEQRLREQLEETKKSWKE------KQGQENSEVTVEDIASVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LLK+EE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETEKLLKLEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 612 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ E+D Y +K V EELK+ FRPEFLNR+DE+IVF L K ++EI +M +
Sbjct: 671 VGFNIQDGEQD--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLREIVSLMAE 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +DI L++T+ +E++ EEGY+P YGARPLRRAI + +ED ++E++L +
Sbjct: 729 QLMKRLKEQDIHLELTDAAKEKIAEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGAVLT 788
Query: 815 GDSVIVDVDSDGNVTV 830
G V++DV+ DG V
Sbjct: 789 GQRVVIDVE-DGEFVV 803
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVENLIGTGKE 73
>gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831]
gi|54035854|sp|Q8EU05.1|CLPB_OCEIH RecName: Full=Chaperone protein ClpB
gi|22775771|dbj|BAC12049.1| ATP-dependent Clp protease (ATP-binding subunit) [Oceanobacillus
iheyensis HTE831]
Length = 809
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/738 (60%), Positives = 577/738 (78%), Gaps = 10/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV+ L+Q+EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVVELSQDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVG-AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+++G + G G G S PTL+ +LT A+EGK+DPV+GR +IERV+Q+L
Sbjct: 140 QLLGSNESQAGRQGRSGQQSNASTPTLDSLARDLTVSAKEGKIDPVIGRSKEIERVIQVL 199
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTA+AEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGE
Sbjct: 200 SRRTKNNPVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDKRVMTLDMGTVVAGTKYRGE 259
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATT
Sbjct: 260 FEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATT 319
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+++ETIQIL GLR+RYE HH++ TDEA+ +AA
Sbjct: 320 LDEYRKYIEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAAS 379
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DRFLPDKAIDLIDEAGS+VRLR +P +ELE++L ++ KEK+ AV+ Q+F
Sbjct: 380 LSDRYITDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEQKLDEVRKEKDAAVQSQEF 439
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD E + ++ ++ KE + G VT DI +VS WTG+PV K
Sbjct: 440 EKAASLRDSEQRFREELETTKNQWKE------KQGQTDSEVTMEDIAAVVSTWTGVPVSK 493
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ DE+DRLL ME+ LH RVIGQ EAV A+++AIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 494 LTKDETDRLLNMEKILHDRVIGQSEAVNAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVG 553
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA F E+AMIR+DMSE+MERH S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 554 KTELARALAEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGYVGYDEGGQLTEKVRRKP 613
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DE+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+S + K +
Sbjct: 614 YSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTSNVGASEL-KRNK 672
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF LD +EKD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I +M+
Sbjct: 673 YVGFALDNEEKD--YKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMV 730
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+++ RLK +D+ L +T++ E++ EG++P YGARPLRR+I + +ED ++E++L I+
Sbjct: 731 QQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIE 790
Query: 814 EGDSVIVDVDSDGNVTVL 831
+ V + +++ G VL
Sbjct: 791 KEQQVKIGLNNKGEFIVL 808
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RLGHN IG+EH+LLGL+REGEG+AA+ L++LG + S I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQ 61
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 62 EEVEKLIG 69
>gi|302390639|ref|YP_003826460.1| ATPase AAA [Thermosediminibacter oceani DSM 16646]
gi|302201267|gb|ADL08837.1| ATPase AAA-2 domain protein [Thermosediminibacter oceani DSM 16646]
Length = 814
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/812 (57%), Positives = 624/812 (76%), Gaps = 26/812 (3%)
Query: 25 NAGKSRRNVKMMSYMQPSASRISS--------FSGLRRSNALDTFTCDFHSTVAVSLSSR 76
N + R ++++Y Q A R++ GL R + + V LS
Sbjct: 2 NGKFTERAQRVIAYAQEEARRLNHNVVGTEHLLLGLIREG--EGVAARALQNLGVELSKV 59
Query: 77 RGKSGR---AGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEG 133
R + R G FVV+ +T +A +V+ LA +E+RRL HNY+G+EH+LLGL+REGEG
Sbjct: 60 REQVQRLIGVGPFVVQGPIG-YTPRAKRVLELALDESRRLKHNYVGTEHILLGLIREGEG 118
Query: 134 VAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
VAA+VL NLG RT+V+ ++G V G SGN PTL ++ +LT+LA E
Sbjct: 119 VAAQVLANLGVSLERARTEVLSLLGSD---VKGHPGFRKSGN-TPTLNQFSRDLTELAAE 174
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPV+GRQ +IERV+Q+L RRTKNNPCLIGEPGVGKTAI EGLAQRI G+VP+ ++
Sbjct: 175 GKLDPVIGRQKEIERVIQVLTRRTKNNPCLIGEPGVGKTAIVEGLAQRIVEGEVPEILKD 234
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++++LD+ LVAGTK+RGEFEERLKK++ E+KQ+ +ILFIDE+HT+IGAGAAEGAIDA
Sbjct: 235 KRIVSLDLASLVAGTKFRGEFEERLKKVINEVKQAGNVILFIDEMHTIIGAGAAEGAIDA 294
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
+NILKPSLARGELQ IGATTLDEYRKH+EKDPALERRFQP+ V EPSV++TI+IL+GLR+
Sbjct: 295 SNILKPSLARGELQTIGATTLDEYRKHVEKDPALERRFQPIIVEEPSVEDTIKILEGLRD 354
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
+YE HH+++ +DEALV+AA+LS +YI+DR+LPDKA+DLIDEA SRVRL+ P E +EL
Sbjct: 355 KYEAHHRVKISDEALVAAAKLSARYITDRYLPDKAVDLIDEAASRVRLQSLTAPPELKEL 414
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
E EL + KEK+ A+R Q+FEKA LRD+E ++KA++ +L + ++ K E
Sbjct: 415 EDELDAVRKEKDAAIRAQEFEKAARLRDKEHEIKAKVDSLKTRWQQEKKLEN------AT 468
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
VT DI IVS WTGIPVE+++ +ES+RLL+MEE LH+RVIGQDEAV+A++RAIRRAR G
Sbjct: 469 VTAADIAGIVSNWTGIPVERMTEEESERLLRMEEILHQRVIGQDEAVEAVARAIRRARAG 528
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LK+P RP+ SFIF GPTGVGK+ELA+ALA FG E+AMIRLDMSE+ME+ VS++IG+P
Sbjct: 529 LKDPRRPVGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRLDMSEYMEKFAVSRMIGAP 588
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGY EGG+LTE VRR+PY+V+LFDEIEKAHPDVFN++LQILEDGRLTD++GRTVDFK
Sbjct: 589 PGYVGYEEGGELTEKVRRKPYSVILFDEIEKAHPDVFNILLQILEDGRLTDAQGRTVDFK 648
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 733
NT++IMTSNVG+++I++ R +GF DE+ +Y+ +K V EEL++ FRPEF+NR+DE
Sbjct: 649 NTVIIMTSNVGANLIQR-ARTLGF-TPRDEETKNYSEMKDRVLEELRRTFRPEFINRVDE 706
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
+IVF L + +K+I D+MLK+V +RLK DI ++V++R +E +V++G++P YGARPLRR
Sbjct: 707 IIVFHPLNEEHMKKIVDLMLKQVNERLKENDISIEVSDRAKEWLVKKGFDPMYGARPLRR 766
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 825
I + +ED+++E++L + +GD+V+VDV D
Sbjct: 767 VIQKEVEDNLSEEILKGNVSQGDTVLVDVQDD 798
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/736 (60%), Positives = 580/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ G GG ++ PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESNGHQ-GGSNTNANTPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ +E++QILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDEPTAEESVQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDE+GS+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDESGSKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE + G VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDTEQRLREELEDTKKTWKE------KQGQENTEVTVEDIAKVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LLK+EE LH RVIGQDEAVKA+S+A+RRAR GLK+P RPI SF+F GPTGVGK
Sbjct: 492 AQTETDKLLKLEEILHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ ++K +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAESLKK-NKH 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ E+D Y +K V EELK+ FRPEFLNR+DE+IVF L K +KEI +M
Sbjct: 671 VGFNIQDGEQD--YKDMKGKVMEELKRAFRPEFLNRIDEIIVFHSLEKAHLKEIVTLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +DI L++T+ +E++ +EG++P YGARPLRRAI + +ED ++E++L +
Sbjct: 729 QLTTRLKEQDISLELTDAAKEKIADEGFDPEYGARPLRRAIQKHIEDRLSEELLRGTVLT 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ D + TV
Sbjct: 789 GQHIVIDVE-DNDFTV 803
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RL H+ IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKGLTALGLSPEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G+ E
Sbjct: 62 KEVESLIGKGKE 73
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/729 (60%), Positives = 574/729 (78%), Gaps = 11/729 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S + + GGG++G PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLGSSESS--SHQGGGNAGANTPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIIQNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+VDE+IQIL+GLR+RYE HH++ TD A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDEPTVDESIQILQGLRDRYEAHHRVSITDAAIQAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE+ L + KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTTPPNLKELEQRLETVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + + KE + G VT DI H+VS WTG+PV K+
Sbjct: 438 KAASLRDTEQKLREELDSTKNTWKE------KQGQENTEVTVDDIAHVVSVWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQ+EAVKA+S+A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNLESILHSRVIGQEEAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGASTLQR-NKN 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ +D Y +K V EELK+ FRPEFLNR+DE IVF L K ++EI +M
Sbjct: 671 VGFNVSDSGED--YKDMKGKVMEELKRAFRPEFLNRIDETIVFHSLEKAHLQEIVTLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL +DI L +T++ ++++ +EG++P YGARPLRRAI + +ED ++E++L I
Sbjct: 729 QLTKRLIEQDIHLSLTDKAKDKIADEGFDPEYGARPLRRAIQKHIEDRLSEELLKGTIIT 788
Query: 815 GDSVIVDVD 823
G ++ +DV+
Sbjct: 789 GQNISIDVE 797
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RL H+ IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKALYALGLSSEKIQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G+ E
Sbjct: 62 KEVETLIGKGKETT 75
>gi|421858335|ref|ZP_16290606.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832093|dbj|GAC41043.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 812
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/741 (60%), Positives = 584/741 (78%), Gaps = 13/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G STEAV + G S PTL+ +LT A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-STEAVSSH-NGQSQNVSTPTLDGLARDLTATAKEGNLDPVIGRTKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+AEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAVAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +P+++ETIQILKGLR+RYE HH+++ +DEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPTIEETIQILKGLRDRYEAHHRVKISDEAIDQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P +ELE L I KEK+ +V+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKELEARLEDIRKEKDASVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ ++ KE + G + VT DI IVS+WTG+PV K+
Sbjct: 438 KAAALRDTEQKMREELDSVRNQWKE------KQGRMDSEVTPEDIAQIVSSWTGVPVVKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E+ RLL MEE LH+RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETQRLLNMEEVLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++
Sbjct: 612 SVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKRN-TT 670
Query: 695 IGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF D +E+D YN +K V ELK+ FRPEFLNR+DE IVF L + + EI +M
Sbjct: 671 LGFTSSDNNERD--YNNMKDKVMAELKKSFRPEFLNRIDETIVFHSLEEKHIAEIVTLMA 728
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+E+ RLK +D++ Q+T+ + + +EGY+P+YGARPLRRAI + +ED ++E++L EI+
Sbjct: 729 EELRKRLKEQDVDFQLTDAAKAFLAKEGYDPAYGARPLRRAIQKHIEDRLSEELLKGEIE 788
Query: 814 EGDSVIVDVDSDGNVTVLNGS 834
+GDSV +D + DGN+ VL S
Sbjct: 789 KGDSVTID-EQDGNLVVLRNS 808
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALVALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVESLIGRGQE 73
>gi|220927785|ref|YP_002504694.1| ATPase AAA [Clostridium cellulolyticum H10]
gi|219998113|gb|ACL74714.1| ATPase AAA-2 domain protein [Clostridium cellulolyticum H10]
Length = 810
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/736 (58%), Positives = 580/736 (78%), Gaps = 7/736 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ LA +EARR+G YIG+EHLLLG+++EGE VA R+L +LG DP + +++
Sbjct: 80 FTPRTKRVLELAFKEARRMGQGYIGTEHLLLGIMKEGESVAVRILMDLGVDPQKLLNELV 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ E T G SS + PTL ++G +LT +A +GK+DPV+GR +IERV+QIL
Sbjct: 140 KILTEETPGSNGSAKGNSSNSNTPTLNQFGRDLTDMARDGKIDPVIGRDKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ + K+V+TLD+ +VAG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILSNKRVVTLDLSSMVAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK MEEI+++ +ILFIDE+HT++GAGAAEGAIDA+NILKPSLARGE+Q IGATTL
Sbjct: 260 EDRLKKAMEEIRKAANVILFIDELHTIVGAGAAEGAIDASNILKPSLARGEIQVIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+EYRKHIEKD ALERRFQP+ V EPS +E ++ILKG+R++YE HH+++ TD+AL +A +L
Sbjct: 320 NEYRKHIEKDAALERRFQPITVGEPSKEEAVEILKGVRDKYEAHHRVKITDDALEAAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+YI+DRFLPDKAIDLIDEA SR+RL+ P + +E+E+ + ++ KEK +A+R Q+FE
Sbjct: 380 GDRYITDRFLPDKAIDLIDEAASRIRLKTFTAPPDLKEMEERVEKLGKEKEDAIRCQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD E LK+++ + D+ + ++ +T+ VTE DI IV++WTGIPV ++
Sbjct: 440 KAARIRDDEQKLKSELEKIRDQWHQKNQTKTD------TVTEDDIADIVASWTGIPVRRL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLLKME+TLHKRVIGQDEAVK+IS+AIRR RVGLK+P RP+ SFIF GPTGVGK
Sbjct: 494 AEEESERLLKMEDTLHKRVIGQDEAVKSISKAIRRGRVGLKDPKRPVGSFIFMGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E++MIR+DMSEFME+H+VSKL+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 554 TELCKALAEAMFGDEKSMIRVDMSEFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPD+FN++LQILEDGRLTDS+GR VDF+NT++IMTSNVG+ I + +R
Sbjct: 614 SVLLFDEIEKAHPDIFNILLQILEDGRLTDSQGRVVDFRNTIIIMTSNVGARTITE-PKR 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF DE +Y +KS V ELK+ FRPEFLNR+D++IVF L+K +KEI +ML
Sbjct: 673 LGFSASNDESAKNYEDMKSNVMSELKKMFRPEFLNRIDDIIVFHPLSKENIKEIVRLMLD 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ +RLK +I ++V+E + ++G++P +GARPLRRAI ++ED +AE ML ++K
Sbjct: 733 VLVNRLKANEIIMEVSEEAMGYLAQKGFDPVFGARPLRRAIQSMVEDKLAEDMLEGKVKA 792
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+ +D+D + V +
Sbjct: 793 GDSIRIDLDGENIVVI 808
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLG 143
M++RFTEKA + I +Q+ A LGHNY+G+EH+LLGL++EG GVAARVL+ G
Sbjct: 1 MYQRFTEKAERAIGFSQQAAVDLGHNYVGTEHILLGLVKEGTGVAARVLQGQG 53
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/737 (60%), Positives = 583/737 (79%), Gaps = 11/737 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV+ L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 79 YTPRAKKVLELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 138
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+V GGG+S PTL+ +LT +A EG+LDPVVGR +I+RV+++L
Sbjct: 139 QLLG-SNESVSGHSGGGASHVSTPTLDSLARDLTAIAREGRLDPVVGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +D+A+V A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDDAIVQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE E VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDMEQRLREELEETKRAWKEKQGQENSE------VTVEDIAMVVSSWTGIPVAKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 612 SVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++D Y +K V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M
Sbjct: 671 VGFNV--QDEDQKYKDMKGKVMDELKRAFRPEFLNRIDEIIVFHSLEKQHLKQIVKLMAD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI+L++T+ E++V EGY+P YGARPLRRA+ + +ED ++E++L I +
Sbjct: 729 TLIKRLKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKQVEDRLSEELLKGTIAK 788
Query: 815 GDSVIVDVDSDGNVTVL 831
G VIVDV DG VL
Sbjct: 789 GQKVIVDV-KDGEFVVL 804
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 1 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQ 60
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 61 KEVESLIGRGHE 72
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/737 (60%), Positives = 583/737 (79%), Gaps = 11/737 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV+ L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 81 YTPRAKKVLELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+V GGG+S PTL+ +LT +A EG+LDPVVGR +I+RV+++L
Sbjct: 141 QLLG-SNESVSGHSGGGASHVSTPTLDSLARDLTAIAREGRLDPVVGRSKEIQRVIEVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +D+A+V A +L
Sbjct: 320 DEYRKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDDAIVQAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 380 SDRYITDRFLPDKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE E VT DI +VS+WTGIPV K+
Sbjct: 440 KAASLRDMEQRLREELEETKRAWKEKQGQENSE------VTVEDIAMVVSSWTGIPVAKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 AQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 554 TELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 614 SVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++D Y +K V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M
Sbjct: 673 VGFNV--QDEDQKYKDMKGKVMDELKRAFRPEFLNRIDEIIVFHSLEKQHLKQIVKLMAD 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI+L++T+ E++V EGY+P YGARPLRRA+ + +ED ++E++L I +
Sbjct: 731 TLIKRLKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKQVEDRLSEELLKGTIAK 790
Query: 815 GDSVIVDVDSDGNVTVL 831
G VIVDV DG VL
Sbjct: 791 GQKVIVDV-KDGEFVVL 806
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 3 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQ 62
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 63 KEVESLIGRGHE 74
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/748 (59%), Positives = 583/748 (77%), Gaps = 14/748 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G S EA + GGGSS PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 HLLG-SNEAASSHQGGGSSNANTPTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ +DEA+ A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L + EK+ +V+ Q+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE E A VT DI +VS+WTG+PV K+
Sbjct: 439 KAASLRDTEQRLREELEDTKKIWKEQQGKENSA------VTVEDIAMVVSSWTGVPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLL MEE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQEETERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 613 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLKR-SKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF ++ + +D Y +K V E+K+ FRPEFLNR+DE+IVF L K + EI +M
Sbjct: 672 LGFTVEAEGQD--YKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHLAEIVKLMAD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++I+L++T+ +++ EEG++P YGARPLRRAI + +ED ++E++L +++
Sbjct: 730 QLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPESLA 842
G V +DVD G V S AP S++
Sbjct: 790 GQKVTLDVDK-GEFVV---KSSAPSSIS 813
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLG++REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVEALIGRGQE 73
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/748 (59%), Positives = 583/748 (77%), Gaps = 14/748 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 79 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 138
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G S EA + GGGSS PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 139 HLLG-SNEAASSHQGGGSSNANTPTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ +DEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L + EK+ +V+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE E A VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREELEDTKKIWKEQQGKENSA------VTVEDIAMVVSSWTGVPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLL MEE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQEETERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLKR-SKH 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF ++ + +D Y +K V E+K+ FRPEFLNR+DE+IVF L K + EI +M
Sbjct: 671 LGFTVEAEGQD--YKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHLAEIVKLMAD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++I+L++T+ +++ EEG++P YGARPLRRAI + +ED ++E++L +++
Sbjct: 729 QLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQK 788
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPESLA 842
G V +DVD G V S AP S++
Sbjct: 789 GQKVTLDVDK-GEFVV---KSSAPSSIS 812
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLG++REGEG+AA+ L LG I+
Sbjct: 1 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQ 60
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 61 KEVEALIGRGQE 72
>gi|403238378|ref|ZP_10916964.1| Class III stress response-related ATPase, ClpC [Bacillus sp.
10403023]
Length = 814
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/727 (61%), Positives = 578/727 (79%), Gaps = 10/727 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ GGGS+ PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESSSGHHGGGSANANTPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+V+E+I ILKGLR+RYE HH++ +DE+++ A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPTVEESILILKGLRDRYEAHHRVSISDESIIQAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTG+PV K+
Sbjct: 439 KAASLRDSEQRLREQLEETKKNWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL MEE LH RVIGQ+EAVKA+S+A+RR+R GLK+P RP SFIF GPTGVGK
Sbjct: 493 AQTEADKLLNMEEILHSRVIGQEEAVKAVSKAVRRSRAGLKDPKRPTGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESIFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S + K +
Sbjct: 613 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASTL-KRNKY 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF ++ +++D Y +K V EELK+ FRPEFLNR+DE+IVF L K +KEI +M
Sbjct: 672 VGFAMEDEKQD--YRNMKDKVMEELKKAFRPEFLNRIDEIIVFHSLEKKHLKEIVTLMAD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D EL++TE ++++ EEGY+P YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLTKRLKEQDFELELTEAAKDQIAEEGYDPDYGARPLRRAIQKQIEDRLSEELLRGNIEK 789
Query: 815 GDSVIVD 821
G +++D
Sbjct: 790 GKKIVMD 796
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHVLLGLIREGEGIAAKALLALGLGPEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVEALIGRGQE 73
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/741 (59%), Positives = 576/741 (77%), Gaps = 14/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNK-----MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++G + G GG+SG + PTL+ +LT +A+EG +DPV+GR +IERV
Sbjct: 140 QLLGNNESTGGQNRRGGASGGQATNANTPTLDSLARDLTAIAKEGNIDPVIGRSKEIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP L+GEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTK
Sbjct: 200 IQVLSRRTKNNPVLVGEPGVGKTAIAEGLAQQIMNNEVPEILRDKRVMTLDMGTVVAGTK 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFE+RLKK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCI
Sbjct: 260 YRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP+KV EP++DE+IQILKGLR+RYE HH++ TD+++
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIKVDEPTLDESIQILKGLRDRYEAHHRVTITDDSIE 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SA + S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE++L ++ KEK+ AV+
Sbjct: 380 SAVRFSDRYITDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQ 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q+FEKA LRD E L+ ++ D+ KE + G VT DI +VS WTG+
Sbjct: 440 SQEFEKAASLRDSEQRLRDELEETKDEWKE------KQGQEDSEVTVEDIASVVSTWTGV 493
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ DES+RLL +EETLH RVIGQ+EAVKAIS+AIRRAR GLK+P RPI SFIF GP
Sbjct: 494 PVSKMTKDESERLLNLEETLHNRVIGQEEAVKAISKAIRRARAGLKDPKRPIGSFIFLGP 553
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE V
Sbjct: 554 TGVGKTELARALAESMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKV 613
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
R +PY+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG+S +
Sbjct: 614 RNKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSNVGASEL- 672
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K + +GF + E D Y +KS VT+ LK+ FRPEFLNR+DE IVF L K +K+I
Sbjct: 673 KQNKYVGFSM--GEADQDYKDMKSKVTDALKKAFRPEFLNRIDETIVFHSLEKKHMKDIV 730
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+M +E+ RL+ ++I+ +++ + + + G++P YGARPLRRAI + +ED ++E++L
Sbjct: 731 VLMAEELRKRLQEQEIDFTLSDAAIQHIADSGFDPEYGARPLRRAIQKNVEDLLSEELLK 790
Query: 810 REIKEGDSVIVDVDSDGNVTV 830
I +G V +D+D + N V
Sbjct: 791 ENIAKGQKVKIDLDENKNYVV 811
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+ EGEG+AA+ L LG + S I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLVSEGEGIAAKALTALGLESSKIQ 61
Query: 151 TQVIRMVGE 159
+V +++G+
Sbjct: 62 QEVEKLIGK 70
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/734 (60%), Positives = 583/734 (79%), Gaps = 9/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR +Y+G+EH+LLGLLREGEGVA R+L G D + +R +++
Sbjct: 81 YTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGEGVAVRILMEQGIDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M+ E A + V + N PTL ++G +LT LA +GKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMLSEEPAAGPSKVSKAKNTN-TPTLNQFGRDLTDLARDGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQ+I G+VP+ ++ K+V+TLD+ LVAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEVPEILKDKRVVTLDLASLVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILF+DE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q IGATTL
Sbjct: 260 EDRLKTVINEVIKAGNVILFVDEMHTLIGAGAAEGAIDASNILKPALARGEIQVIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK++E+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+L
Sbjct: 320 DEYRKYVERDPALERRFQPIMVEEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAAKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++E
Sbjct: 380 SHRYITDRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E L+ Q+ L K K + +E VGP +I +VS WTGIPV+K+
Sbjct: 440 KAAKIRDEEQKLREQLEEL--KAKWQQNSLSEEKSVGP----EEIAQVVSMWTGIPVKKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LH+RVIGQDEAV+A+++AIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AEEESERLLHLEEILHERVIGQDEAVEAVAKAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRRRPY
Sbjct: 554 TELSKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRRPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K
Sbjct: 614 SVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQT-T 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF E +S+ +IK + EL++ FRPEFLNR+DE+IVF L+K +++IADIM+K
Sbjct: 673 LGFMPQEKEDKASFEKIKETLMAELRKTFRPEFLNRVDEIIVFHPLSKEHIEKIADIMIK 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL+ +I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K
Sbjct: 733 ELNKRLEENNIKLEFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKP 792
Query: 815 GDSVIVDVDSDGNV 828
GD +IV + DG +
Sbjct: 793 GDELIVTAE-DGKI 805
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RFTE+A K + LAQEEAR HNY+G+EH+LLGLL+E EG+AARVL+ LG
Sbjct: 2 AMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYEAT 61
Query: 150 RTQVIRMVG 158
R +V+ ++G
Sbjct: 62 REKVLSLIG 70
>gi|332800110|ref|YP_004461609.1| ATPase AAA-2 domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|438003416|ref|YP_007273159.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
gi|332697845|gb|AEE92302.1| ATPase AAA-2 domain protein [Tepidanaerobacter acetatoxydans Re1]
gi|432180210|emb|CCP27183.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
Length = 813
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/721 (61%), Positives = 576/721 (79%), Gaps = 13/721 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ LA +E+RRLGHNY+G+EH+LLGL+REGEGVAA+VL NLG R +V+
Sbjct: 80 YTPRAKRVMELAIDESRRLGHNYVGTEHILLGLIREGEGVAAQVLANLGVSLDKAREEVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++ +S G PTL ++G +LT+LA EGKLDPVVGR+ +IERV+Q+L
Sbjct: 140 NLLVDSK-----AQGSYKKSANTPTLNQFGRDLTELAAEGKLDPVVGREKEIERVIQVLT 194
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTA+ EGLAQ+I +VP+ ++ K+V++LDM LVAGTK+RGEF
Sbjct: 195 RRTKNNPCLIGEPGVGKTAVVEGLAQQIIEQNVPEILKDKRVVSLDMASLVAGTKFRGEF 254
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK+M EIKQ+ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+
Sbjct: 255 EERLKKVMTEIKQAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQTIGATTI 314
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK++EKDPALERRFQP+ V EP+V+ETIQILKGLR+RYE HH+++ +DEA+ +AA+L
Sbjct: 315 DEYRKYVEKDPALERRFQPIMVEEPTVEETIQILKGLRDRYEAHHRVKISDEAIEAAAKL 374
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
SY+YI+DRFLPDKAIDLIDEA SRVRL+ P E RE+E +L I KEK+ A+R Q+FE
Sbjct: 375 SYRYITDRFLPDKAIDLIDEAASRVRLKTLTAPPELREMEDKLEAIRKEKDAAIRAQEFE 434
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E ++KA++ L + ++ K E V E DI HIV+ WTGIPV+++
Sbjct: 435 KAASLRDKEQEVKAEVEKLKELWQKDYKFENST------VKEEDIAHIVAIWTGIPVKRL 488
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLLK+EE LH RVIGQDEAVKA+++AIRRA GLK+P RPI SFIF GPTGVGK
Sbjct: 489 TEEESERLLKLEEVLHNRVIGQDEAVKAVAKAIRRAYAGLKDPARPIGSFIFLGPTGVGK 548
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIRLDMSE+ME+ VS+++G+PPGYVGY EGG+LTE VRRRPY
Sbjct: 549 TELARALADAMFGDEDAMIRLDMSEYMEKFAVSRIVGAPPGYVGYEEGGELTEKVRRRPY 608
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQILEDGRLTD+KGRTVDF+NT+LIMTSNVG+++I+K +
Sbjct: 609 SVILFDEIEKAHPDVFNILLQILEDGRLTDAKGRTVDFRNTILIMTSNVGANLIQK-PKV 667
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF E++ SY +K +V ELK+ F+PEFLNR+DE+IVF L++ ++EI +M+
Sbjct: 668 LGF-APVQEEEKSYAEMKDMVLNELKRTFKPEFLNRIDEIIVFHPLSEEHIREIVTLMID 726
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
EV RL K I ++VT++ ++ + +EGY+P YGARPLRR I + +ED ++E+ML I +
Sbjct: 727 EVNRRLTEKQISIEVTDKAKDVLAKEGYDPMYGARPLRRVIQKRIEDRLSEEMLKGSITD 786
Query: 815 G 815
G
Sbjct: 787 G 787
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
RFTE+A KVI AQEEARRL HN +G+EHLLLGLLREGEGVAAR L NLG D +R+QV
Sbjct: 4 RFTERAQKVIAYAQEEARRLNHNVVGTEHLLLGLLREGEGVAARALINLGVDADKVRSQV 63
Query: 154 IRMVG 158
M+G
Sbjct: 64 EMMIG 68
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/748 (59%), Positives = 583/748 (77%), Gaps = 14/748 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G S EA + GGGSS PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 HLLG-SNEAASSHQGGGSSNANTPTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+++E+IQILKGLR+RYE HH++ +DEA+ A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L + EK+ +V+ Q+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE E A VT DI +VS+WTG+PV K+
Sbjct: 439 KAASLRDTEQRLREELEDTKKIWKEQQGKENSA------VTVEDIAMVVSSWTGVPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLL MEE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQEETERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 613 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGADTLKR-SKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF ++ + ++ Y +K V E+K+ FRPEFLNR+DE+IVF L K + EI +M
Sbjct: 672 LGFTVEAEGQE--YKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHLAEIVKLMAD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++I+L++T+ +++ EEG++P YGARPLRRAI + +ED ++E++L +++
Sbjct: 730 QLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPESLA 842
G V +DVD G V S AP S++
Sbjct: 790 GQKVTLDVDK-GEFVV---KSSAPSSIS 813
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLG++REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVEALIGRGQE 73
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/738 (60%), Positives = 579/738 (78%), Gaps = 12/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S A +G GG++ PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLGSSESA--SGHHGGATHANTPTLDSLARDLTAIAREGGLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIHVGEPTVEESIQILKGLRDRYEAHHRVSISDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRLR P +ELE++L +I KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEACSKVRLRSFTTPPNLKELEQKLEEIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDAEQKLREQLEETKRAWKE------KQGQENSEVTVEDIAAVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETERLLKLEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 612 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ Y +K V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M++
Sbjct: 671 VGFNV--QDESQQYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKKHLKEIVSLMVE 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL+ + I+L++T+ E++ EEGY+ YGARPLRRAI + +ED ++E++L I
Sbjct: 729 QLKKRLQEQQIDLELTDAAIEKLAEEGYDLEYGARPLRRAIQKHVEDRLSEELLKGTIGS 788
Query: 815 GDSVIVDVDSDGNVTVLN 832
G V++DV DG VL
Sbjct: 789 GQKVVMDV-KDGQFVVLT 805
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGNE 73
>gi|167629433|ref|YP_001679932.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
gi|167592173|gb|ABZ83921.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
Length = 814
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/740 (60%), Positives = 574/740 (77%), Gaps = 13/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A + + LA EE RR G NY+G+EH+LLGL+REGEGVAARVL LG +R QV+
Sbjct: 79 LTPRAKRALELANEEGRRQGVNYVGTEHILLGLIREGEGVAARVLAELGLTLEKVRHQVM 138
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
++G + T + G K P L E+G +LT+LA +GKLDPV+GR+ +IERVVQI
Sbjct: 139 TLLGGPQPTPSGNGSSAAAERGRKTPALNEFGRDLTQLARDGKLDPVIGREREIERVVQI 198
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+AEGLAQRI G VP+T+ GK+V+TLD+ +VAG+KYRG
Sbjct: 199 LSRRTKNNPVLIGEPGVGKTAVAEGLAQRIVDGKVPETLTGKRVVTLDLSSVVAGSKYRG 258
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEERLKK+M+EI+Q+ ++LFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQCIGAT
Sbjct: 259 EFEERLKKVMDEIRQAGNVVLFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 318
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKHIE+DPALERRFQP+ V EP +E + ILKGLR+RYE HH+++ TDEA+ +A
Sbjct: 319 TLDEYRKHIERDPALERRFQPITVGEPKREEAVAILKGLRDRYEAHHRVQITDEAIEAAV 378
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YISDR+LPDKAIDLIDEA SRVRL+ P + +ELE L + KEK AV Q+
Sbjct: 379 RLSDRYISDRYLPDKAIDLIDEAASRVRLQTFTAPPDMKELESRLEGLRKEKEAAVLSQE 438
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA +LRD+EM L+AQ+ K+ S E G VV E DI IVS+WTG+PV
Sbjct: 439 FEKAAQLRDQEMQLRAQLE------KQKSDWEHARGSANTVVREEDIAQIVSSWTGVPVT 492
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
+++ ES RLLK+EE LH+RVIGQDEAV A+SRA+RRAR GLK+P RPI SFIF GPTGV
Sbjct: 493 RLAESESARLLKLEEELHRRVIGQDEAVAAVSRAVRRARAGLKDPKRPIGSFIFLGPTGV 552
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+ALA FG E+AM+R+DMSE+ME+H+VS+L+G+PPGY+G+ EGGQLTEAVRRR
Sbjct: 553 GKTELARALAEALFGQEDAMVRIDMSEYMEKHSVSRLVGAPPGYIGHDEGGQLTEAVRRR 612
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+V+L DEIEKA+P+VFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ I++
Sbjct: 613 PYSVILLDEIEKANPEVFNILLQVLEDGRLTDSKGRTVDFRNTVIIMTSNVGAQTIKRSA 672
Query: 693 RRIGF---DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+GF + E++ Y +K+ V EELK+ FRPEFLNR+DEMIVF L +++ I
Sbjct: 673 -VMGFKPTEQGAKEREVQYEGMKNRVMEELKRSFRPEFLNRIDEMIVFHTLAAEDIRRIV 731
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ML EV RL + ++VT+ R+ + + GY+ ++GARPLRRAI+RL+ED ++E +L
Sbjct: 732 DLMLGEVNRRLAEAGLSMEVTDAARDHLAKVGYDETFGARPLRRAILRLVEDEISEALLK 791
Query: 810 REIKEGDSVIVDVDSDGNVT 829
E K GD +IV + +DG ++
Sbjct: 792 GEYKAGDQIIVGM-ADGKLS 810
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M RFTE+A KV++LA+EEA L H +GSEHLLLGL+REGEG+ A+ L ++ D +R
Sbjct: 1 MMGRFTERAQKVLLLAKEEAVALKHPAVGSEHLLLGLIREGEGIGAKALLSMHLDLEQVR 60
Query: 151 TQVIRMVGE 159
QVIR+VGE
Sbjct: 61 RQVIRLVGE 69
>gi|333373136|ref|ZP_08465052.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
gi|332970715|gb|EGK09695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
Length = 814
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/736 (60%), Positives = 587/736 (79%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G STEAV + GS N PTL+ +LT A+E KLDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-STEAVSSHQASGSGAN-TPTLDSLAQDLTAAAKEDKLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+AEGLAQ+I G+ P+T+ GK+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAVAEGLAQKIHDGETPETLRGKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS +ETI ILKGLR+RYE HH+++ TDEA+ ++ +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDEPSSEETILILKGLRDRYEAHHRVKITDEAIEASVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRL +P + +E+E++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAASKVRLSSFTVPPDLKEMEQKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E L+ ++ + ++ KE + +T++ +VGP DI +V+ WTGIPV K+
Sbjct: 438 KAASLRDKEQKLREELESTRNRWKE-DQGKTDS-EVGP----EDIAEVVANWTGIPVRKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ESDRLL +EE LHKRVIGQDEAV ++SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AEEESDRLLNLEEILHKRVIGQDEAVLSVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEA+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEEAIIRIDMSEYMEKHSTSRLVGAPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDE+EKAHP+VFN+MLQ+LEDGRLTD KGRTVDF+NT++IMTSNVG+++I K +R
Sbjct: 612 SVVLFDEVEKAHPEVFNVMLQVLEDGRLTDGKGRTVDFRNTVIIMTSNVGANLI-KQNKR 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D Y +K V EELK+ FRPEFLNR+D++IVF L + +++I +M
Sbjct: 671 LGFAVG-DSAQDEYEAMKENVMEELKKTFRPEFLNRIDDVIVFHSLKEEHLQQIVSLMSN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL+ ++I+ +T+ + + + G++P+YGARPLRRAI + +ED ++E++L IK
Sbjct: 730 QLRKRLQEQEIDFVLTDAASKYLAKAGFDPTYGARPLRRAIQKHIEDRLSEELLKGSIKR 789
Query: 815 GDSVIVDVDSDGNVTV 830
GD++ +D + DG + V
Sbjct: 790 GDTLEID-EKDGKLQV 804
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH IG+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHGNIGTEHILLGLVREGEGIAAKALMGLGLGLEKVQ 61
Query: 151 TQVIRMVG 158
+V ++G
Sbjct: 62 KEVESLIG 69
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/738 (60%), Positives = 579/738 (78%), Gaps = 12/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 83 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + A +G GG++ PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 143 QLLGSNESA--SGHHGGTTHANTPTLDSLARDLTAIAREGGLDPVIGRSKEIQRVIEVLS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 201 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 261 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+ A +L
Sbjct: 321 DEYRKYIEKDAALERRFQPIHVGEPTVEESIQILKGLRDRYEAHHRVSISDEAIEQAVKL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRLR P +ELE++L +I KEK+ AV+ Q+FE
Sbjct: 381 SDRYISDRFLPDKAIDLIDEACSKVRLRSFTTPPNLKELEQKLEEIRKEKDAAVQSQEFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTGIPV K+
Sbjct: 441 KAASLRDAEQKLREQLEETKRAWKE------KQGQENSEVTVEDIAAVVSSWTGIPVSKL 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RVIGQ+EAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 495 AQTETERLLKLEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 555 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 615 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 673
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ Y +K V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M++
Sbjct: 674 VGFNV--QDESQQYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKKHLKEIVSLMVE 731
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL+ + I+L++T+ E++ EEGY+ YGARPLRRAI + +ED ++E++L I
Sbjct: 732 QLKKRLQEQQIDLELTDAAIEKLAEEGYDLEYGARPLRRAIQKHVEDRLSEELLKGTIGS 791
Query: 815 GDSVIVDVDSDGNVTVLN 832
G V++DV DG VL
Sbjct: 792 GQKVVMDV-KDGQFVVLT 808
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%)
Query: 87 VVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP 146
++K MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P
Sbjct: 1 MMKMMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGP 60
Query: 147 SNIRTQVIRMVGESTE 162
I+ +V ++G E
Sbjct: 61 DKIQKEVESLIGRGNE 76
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/736 (60%), Positives = 578/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ GG ++ PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLGSNDS--GSHQGGSAASANTPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ DE++QILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDEPTADESVQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTTPPNLKELELKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE E VT DI H+V++WTGIPV K+
Sbjct: 438 KAASLRDSEQRLREQLEETKKSWKEKQGKENSE------VTVDDIAHVVASWTGIPVAKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+ +LL MEE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SF+F GPTGVGK
Sbjct: 492 AQTETAKLLNMEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFVFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ E+D Y +K V EELK+ FRPEFLNR+DE+IVF L K +KEI ++
Sbjct: 671 VGFNIQDGEQD--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALEKKHLKEIVTLLSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL+ ++I L +T++ +E++ EEGY+P YGARPLRRAI + +ED ++E++L ++
Sbjct: 729 QLVKRLQEQEIVLGLTDKAKEKISEEGYDPEYGARPLRRAIQKHIEDRLSEELLKGQVLT 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +VI+DV+ DG V
Sbjct: 789 GQNVIIDVE-DGEFVV 803
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH+ IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHSNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQ 61
Query: 151 TQVIRMVG 158
+V ++G
Sbjct: 62 KEVENLIG 69
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/736 (60%), Positives = 576/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ G+ GG ++ PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNES-GSHQGGSAANANTPTLDGLARDLTAIAREGSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +E++QIL+GLR+RYE HH++ TD A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDEPTAEESVQILEGLRDRYEAHHRVTITDAAIQAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE +L + KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTTPPNLKELEVKLEDVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE E VT DI ++V++WTGIPV K+
Sbjct: 438 KAASLRDTEQRLREQLEETKKTWKEKQGKENSE------VTVEDIANVVASWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LL +EE LH RVIGQ+EAVKAIS+A+RRAR GLK+P RPI SF+F GPTGVGK
Sbjct: 492 AQTETEKLLNLEEILHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFVFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ E+D Y +K V EE+K+ FRPEFLNR+DE+IVF L K ++EI +M
Sbjct: 671 VGFNIQDGEQD--YKDMKGKVMEEMKKSFRPEFLNRIDEIIVFHALEKKHLQEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI L++T+ +E++ EGY+P YGARPLRRAI + +ED ++E++L +
Sbjct: 729 TLTKRLKEQDITLELTDAAKEKISVEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLT 788
Query: 815 GDSVIVDVDSDGNVTV 830
G SV++DV DG V
Sbjct: 789 GQSVVIDV-KDGEFVV 803
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYALGLGSDKIQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G +A
Sbjct: 62 KEVENLIGRGQDA 74
>gi|403743591|ref|ZP_10953143.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122621|gb|EJY56826.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 810
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/731 (60%), Positives = 581/731 (79%), Gaps = 13/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+L H+Y+G+EH+LLGL+REGEGVAARVL N+ + R QV+
Sbjct: 79 YTPRAKKVIELSIDEARKLNHSYVGTEHILLGLIREGEGVAARVLANMNVSLNKARQQVL 138
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G +AV G S PTL+ +LT++A +GKLDPV+GR +IERV+Q+L
Sbjct: 139 QLLG--GDAVDLA-GDKDSSVGTPTLDSLARDLTQMARDGKLDPVIGRANEIERVIQVLS 195
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI +GD+P+T+ K+V+ LDMG +VAGTKYRGEF
Sbjct: 196 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDIPETLRNKRVMVLDMGTVVAGTKYRGEF 255
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 256 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 315
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQP+ V +PS +E ++IL+GLR+RYE HH+++ TDEAL +A ++
Sbjct: 316 DEYRKHIEKDAALERRFQPITVDQPSPEEALEILRGLRDRYEAHHRVKITDEALEAAVRM 375
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGSRVRLR P +ELE++L ++ EK+ AV+ Q+FE
Sbjct: 376 SDRYISDRFLPDKAIDLIDEAGSRVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFE 435
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A LRD+E +K ++ L KE + + DV VT DI H+V+AWTGIPV+++
Sbjct: 436 QAASLRDQEQKIKQELEQL----KERWQQTQQHDDVR--VTADDIAHVVAAWTGIPVKQL 489
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL ME+ LH+RVIGQDEAV+A+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 490 AQEESERLLHMEQLLHERVIGQDEAVQAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 549
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSEFMERHT S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 550 TELARALAESMFGDEDALIRIDMSEFMERHTTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 609
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+L+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG
Sbjct: 610 SVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-S 668
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + S Y +K V ++LK+ FRPEFLNR+DE+IVF L + + I D+M+
Sbjct: 669 VGFKRD---ESSRYLDMKDKVMQDLKKTFRPEFLNRIDEIIVFHSLDEDHIGRIVDMMVH 725
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK ++IE +T+ ++ + +EG++P YGARPL+RAI+R +ED ++E +L+ +IK+
Sbjct: 726 NLQRRLKEQEIEFTLTDEAKKFLSKEGFDPQYGARPLQRAIVRHIEDRLSEALLSGQIKK 785
Query: 815 GDSVIVDVDSD 825
GDSV++ +D D
Sbjct: 786 GDSVVLGLDGD 796
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFTE+A +V+ LAQEEA RL H +G+EH+LLGL+REGEG+AAR L+ LG ++
Sbjct: 1 MYARFTERAQRVLALAQEEATRLSHPGVGTEHILLGLVREGEGIAARALQMLGVQADKVQ 60
Query: 151 TQVIRMVGESTEAVGA 166
+V R++G+ V A
Sbjct: 61 QEVERIIGKGQGQVSA 76
>gi|427418168|ref|ZP_18908351.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425760881|gb|EKV01734.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/737 (59%), Positives = 580/737 (78%), Gaps = 11/737 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +++ + +EA++L +Y+G EHLLL + + AA++L LG D +R +I
Sbjct: 80 FTPSAKQLLEQSLKEAQQLDQSYVGPEHLLLAVTSSDKSSAAKILTTLGVDLVKLRIAII 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
R VGE G G + G + LEE+ T+LTKLA EG +DPVVGR+ +IERVVQILG
Sbjct: 140 RAVGERLPVPTTG-GQDARGFRGKALEEFATDLTKLAAEGNIDPVVGRRQEIERVVQILG 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RR+KNNP LIGEPGVGKTAIAEGLAQRI + DVP+ + ++V++LD+ LVAGT++RGEF
Sbjct: 199 RRSKNNPVLIGEPGVGKTAIAEGLAQRIINQDVPELLLDQRVLSLDINSLVAGTRFRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLK+++ E+ ++ IIL IDE+HTL+GAG EG +DAAN+LKP+LARGELQCIGATTL
Sbjct: 259 EERLKQIVAEVNKAGNIILLIDEIHTLVGAGGMEGGMDAANMLKPALARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQPV V EPSV+ETI+IL+G+R YE HH L +D+ALV+AA+L
Sbjct: 319 DEYRKYIEKDGALERRFQPVMVNEPSVEETIEILQGVRASYEQHHNLLISDDALVTAAKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DR+LPDKAIDLIDEAGS V LRH+Q A+EL++ LR+I ++K+ AV+ Q+F+
Sbjct: 379 SNRYIADRYLPDKAIDLIDEAGSCVHLRHSQ-TSLAKELKQSLRKIIQDKDAAVKAQEFD 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A ELRD+E++L+A++ + A D PVVT DI +V++WTG+P ++
Sbjct: 438 RASELRDQELELEAKLQDF--------NEDRAATDTRPVVTVEDIAQVVASWTGVPANRI 489
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES L+K+EETLH+R+IGQ+ AV A+++AIRRARVGL++ RPIASFIF GPTGVGK
Sbjct: 490 TKSESAMLMKLEETLHQRIIGQENAVNAVAKAIRRARVGLRSEQRPIASFIFCGPTGVGK 549
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E+A+IRLDMSE+ME +V+KLIGSPPGYVGY +GGQLTEAVRR+PY
Sbjct: 550 TELTKALADIVFGAEDAIIRLDMSEYMEPQSVAKLIGSPPGYVGYGDGGQLTEAVRRKPY 609
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
TVVLFDEIEKAHPDVFN++LQ+L+DGRLTDS+GR VDFKNT++IMTSN+GS IEK G
Sbjct: 610 TVVLFDEIEKAHPDVFNLLLQLLDDGRLTDSQGRVVDFKNTVIIMTSNIGSRAIEKQGTG 669
Query: 695 IGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
IGFD+ D D + YNR + V + LK FRPEFLNRLDE+IVF QL + EVK+IADI+L
Sbjct: 670 IGFDMIDGDLATAQYNRTREQVNDALKSSFRPEFLNRLDEIIVFHQLKRSEVKQIADILL 729
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++V RL + I+++VTE F++++V EGY+PSYGARPLRRAI RL+EDS+AE +LA +I+
Sbjct: 730 QDVAKRLVEQAIKIEVTEAFKDKLVVEGYDPSYGARPLRRAITRLVEDSLAEALLAGDIR 789
Query: 814 EGDSVIVDVDSDGNVTV 830
G++ ++DV+ DG VTV
Sbjct: 790 AGETAVLDVNDDGQVTV 806
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F +KAI IM+AQ++A RL +Y+G+E +L+G++ +G+ + + ++ G I
Sbjct: 1 MFELFNDKAISAIMIAQQQASRLRQHYVGTELILVGVMAQGDSLVSPIVREAG-----IT 55
Query: 151 TQVIRMVGEST 161
QV++ E+T
Sbjct: 56 LQVLQEAVEAT 66
>gi|408355460|ref|YP_006843991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
gi|407726231|dbj|BAM46229.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
Length = 811
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/740 (59%), Positives = 581/740 (78%), Gaps = 12/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEG+AARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGIAARVLNNLGVSLNRARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGN--KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++G S E+V G + N PTL+ +LT+ A EG +DPV+GR+ +IERV+Q+
Sbjct: 140 QLLG-SNESVRKGQARHTQSNPASTPTLDSLARDLTQTAREGNVDPVIGREKEIERVIQV 198
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+AEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRG
Sbjct: 199 LSRRTKNNPVLIGEPGVGKTAVAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRG 258
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFE+RLKK+MEEI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGAT
Sbjct: 259 EFEDRLKKVMEEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 318
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
T+DEYRK+IEKD ALERRFQP++V EP+V+E+I+ILKGLR+RYE HH++ TDEA+ +AA
Sbjct: 319 TIDEYRKYIEKDAALERRFQPIRVDEPTVEESIEILKGLRDRYEAHHRVTITDEAIEAAA 378
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
LS +YI+DRFLPDKAIDLIDEAGSRVRLR P +ELE +L +I KEK+ AV+ Q+
Sbjct: 379 HLSSRYITDRFLPDKAIDLIDEAGSRVRLRSYTAPSNLKELENKLTEIRKEKDAAVQSQE 438
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA LRD+E LK ++ +K +E E VV E DI +VS WTG+PV+
Sbjct: 439 FEKAAALRDQEQKLKKELELTKEKWQEKQGKED-----SRVVVE-DIASVVSNWTGVPVD 492
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
++ DE+DRLL +E LH RVIGQ EAV A+S+AIRRAR GLK+P RPI SFIF GPTGV
Sbjct: 493 SLTKDEADRLLNLESILHGRVIGQSEAVTAVSKAIRRARAGLKDPKRPIGSFIFLGPTGV 552
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+ALA FG E+AMIR+DMSE+ME+HT S+L+GSPPGYVGY EGGQLTE VR +
Sbjct: 553 GKTELARALAEAMFGDEDAMIRIDMSEYMEKHTTSRLVGSPPGYVGYEEGGQLTEKVRSK 612
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG+S ++K
Sbjct: 613 PYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSNVGASELQK-N 671
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+ +GF++D + D + ++K+ VT+ LK+ FRPEFLNR+DE IVF L + +K+I +M
Sbjct: 672 KFVGFNIDDHQTD--HKQMKANVTDALKKAFRPEFLNRIDETIVFHALERGHMKDIVTLM 729
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
++++ DRL + ++ ++ + E++ EEG++P YGARPLRR+I + +ED ++E +L EI
Sbjct: 730 VRQLQDRLVKQGLDFTISNKAIEKIAEEGFDPEYGARPLRRSIQKNIEDLLSEALLRGEI 789
Query: 813 KEGDSVIVDVDSDGNVTVLN 832
+ +++ + + S+G +LN
Sbjct: 790 NKNETIRIGLSSNGKFIILN 809
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RLGH+ IG+EH+LLGL+REGEG+AA+ L L + I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRLGHHNIGTEHILLGLIREGEGIAAKALHALNLEKDKIQ 61
Query: 151 TQVIRMVG 158
+V ++G
Sbjct: 62 EEVEALIG 69
>gi|392958574|ref|ZP_10324083.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
gi|391875475|gb|EIT84086.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
Length = 810
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/731 (60%), Positives = 580/731 (79%), Gaps = 11/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA G ++ N PTL+ +LT +A++G LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSNHRGSSANAN-TPTLDSLARDLTAVAKDGSLDPVIGRAKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ DE+ QIL+GLR+RYE HH+++ TDEA+ +A L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVNEPTKDESTQILQGLRDRYEAHHRVKITDEAIEAAVTL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRLR P +ELE +L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEVKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE + G VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREELEKTKNVWKE------KQGQENTEVTPEDIAQVVSSWTGVPVAKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLLK+EE LH RVIGQDEAV++IS+AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQEETERLLKLEEILHNRVIGQDEAVQSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+A+IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 552 TELARAVAESLFGDEDAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+S +++ +
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTVVIMTSNVGASTLKR-NKT 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + + D Y+ +KS V +ELK+ FRPEFLNR+DE+IVF L K +KEI +M
Sbjct: 671 LGFTVHSE--DQQYSDMKSKVMDELKKAFRPEFLNRIDEIIVFHGLEKKHLKEIVTLMAD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RL+ +DIE+++T+ +++ EEGY+P YGARPLRRA+ R +ED ++E++L I +
Sbjct: 729 SLIQRLRDQDIEIELTDAALDKITEEGYDPDYGARPLRRALQRKIEDRLSEELLRGNISK 788
Query: 815 GDSVIVDVDSD 825
G+ V +DVD++
Sbjct: 789 GNVVKIDVDNN 799
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN +G+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALHVLGLGPEKIQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G E+V
Sbjct: 62 KEVETLIGRGQESV 75
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/738 (60%), Positives = 586/738 (79%), Gaps = 12/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E++ +G GGG+S PTL+ +LT +A EG+LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESM-SGHGGGASHVSTPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+V A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE + G VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDMEQRLREELEETKRAWKE------KQGQENLEVTVEDIAAVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AETETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 612 SVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + + Y +KS V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M
Sbjct: 671 VGFNI--QDGNQQYKDMKSKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLKQIVRLMAD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI+L++TE E++ EG++P YGARPLRRA+ + +ED ++E++L I +
Sbjct: 729 TLVKRLKEQDIDLELTEAAIEKIAAEGFDPEYGARPLRRALQKHVEDRLSEELLKGTIAK 788
Query: 815 GDSVIVDVDSDGNVTVLN 832
G V+VDV DG VL+
Sbjct: 789 GQKVVVDV-KDGEFVVLS 805
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 62 KEVESLIGRGSE 73
>gi|384136760|ref|YP_005519474.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339290845|gb|AEJ44955.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 812
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/731 (61%), Positives = 580/731 (79%), Gaps = 14/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EHLLLGL+REGEGVAARVL N+ + + R QV+
Sbjct: 80 YTPRAKKVIELSIDEARKLGHSYVGTEHLLLGLIREGEGVAARVLANMNVNLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + AG S G PTL+ +LT++A +GKLDPV+GR+ +IERV+Q+L
Sbjct: 140 QLLGGDAMDI-AGDKDASVGT--PTLDSLARDLTQMARDGKLDPVIGREKEIERVIQVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI +GDVP+T+ K+V+ LDMG +VAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGDVPETLRNKRVMVLDMGTVVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 257 EDRLKKIMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKDPALERRFQP+ V EPS +E ++ILKGLR+RYE HH+++ TDEAL +A +L
Sbjct: 317 DEYRKHIEKDPALERRFQPIMVDEPSPEEALEILKGLRDRYEAHHRVKITDEALEAAVKL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA SRVRLR P +ELE++L ++ EK+ AV+ Q+FE
Sbjct: 377 SDRYISDRFLPDKAIDLIDEAASRVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A LRD E +K ++ L KE + + DV VTE DI HIVS+WTGIPV+++
Sbjct: 437 LAASLRDEEQKIKEELERL----KETWQKTQQLDDVR--VTEEDIAHIVSSWTGIPVQQL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
DES+RLL +E+ LH+RVIGQDEAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 QQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 551 TELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+L+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG
Sbjct: 611 SVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-A 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D+ Y +K V +ELK+ FRPEFLNR+DE+IVF L + ++ I D M+
Sbjct: 670 LGFKREEDK----YLGMKDKVMDELKRTFRPEFLNRIDEIIVFHPLDETHIERIVDKMVD 725
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK ++IE ++T+ ++ + + G++P YGARPL+RAI+R +ED ++ ++A EIK+
Sbjct: 726 NLKRRLKEQEIEFELTDEAKKFLAKVGFDPQYGARPLQRAIVRNVEDLLSSALIAGEIKK 785
Query: 815 GDSVIVDVDSD 825
GD V++ VD D
Sbjct: 786 GDRVLLGVDGD 796
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFTE+A KV+ LAQEEA RL H +G+EH+LLGL+REGEG+AA+ L+ LG ++
Sbjct: 2 MYARFTERAQKVLALAQEEASRLNHPGVGTEHILLGLIREGEGIAAKALQMLGVQADKVQ 61
Query: 151 TQVIRMVGESTEAVGA 166
++ RMVG V A
Sbjct: 62 QEIERMVGRGQTPVTA 77
>gi|374603227|ref|ZP_09676209.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
gi|374391096|gb|EHQ62436.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
Length = 812
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/741 (59%), Positives = 584/741 (78%), Gaps = 13/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G S PTL+ +LT A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGQSQNVSTPTLDGLARDLTAAAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+AEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAVAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +P+++ETI ILKGLR+RYE HH+++ +DEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPTIEETILILKGLRDRYEAHHRVKISDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P +ELE L I KEK+ +V+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKELEARLDDIRKEKDASVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ ++ KE + G + VT DI IVS+WTG+PV K+
Sbjct: 438 KAAALRDTEQKMREELDSVRNQWKE------KQGRMDSEVTPEDIAQIVSSWTGVPVVKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E+ RLL MEE LH+RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETQRLLNMEEVLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESLFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKR-NTT 670
Query: 695 IGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF D +E+D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M
Sbjct: 671 LGFTSPDNNERD--YNNMKDKVMAELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMA 728
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+E+ RLK +D++ Q+T+ + + +EGY+P+YGARPLRRAI + +ED ++E++L +I+
Sbjct: 729 EELRKRLKEQDVDFQLTDAAKAFLAKEGYDPAYGARPLRRAIQKHIEDRLSEELLKGDIE 788
Query: 814 EGDSVIVDVDSDGNVTVLNGS 834
+GDSV +D + DG++ VL +
Sbjct: 789 KGDSVTID-EQDGSLVVLRNT 808
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALVALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/735 (61%), Positives = 579/735 (78%), Gaps = 12/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLTNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S +V GG ++ PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 140 QLLGNSEASVQ---GGSAASVSTPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVHNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 257 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP++DE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 317 DEYRKYIEKDAALERRFQPIQVDEPTIDESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FE
Sbjct: 377 SDRYIADRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELELKLEEVRKEKDAAVQSQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ ++ K+ KA+ G VT DI +VS+WTG+PV K+
Sbjct: 437 KAAALRDTEQKLREQL----EETKKNWKAKQ--GQENSEVTVDDIALVVSSWTGVPVTKL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLL +EE LH RVIGQ+EAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 AQTETERLLHLEEILHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 551 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF NT++IMTSNVG+ +++ +
Sbjct: 611 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADALKR-NKS 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D ++ Y +K V EELK+ FRPEFLNR+DE IVF L K ++ EI +M K
Sbjct: 670 VGFTIQ-DTVEADYKDMKDKVLEELKKAFRPEFLNRVDETIVFHSLEKKQLNEIVTLMAK 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ DRLK IEL +T+ +E+V E+GY+P YGARPLRR+I + +ED ++E+ML IKE
Sbjct: 729 ELSDRLKEHHIELVLTDAAKEKVAEKGYDPEYGARPLRRSIQKNIEDRLSEEMLKGNIKE 788
Query: 815 GDSVIVDVDSDGNVT 829
G V+VDV DG T
Sbjct: 789 GQKVLVDV-KDGEFT 802
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RL HN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRLKHNNIGTEHILLGLVREGEGIAAKALYGLGLSAEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 EEVETLIGNGQE 73
>gi|334136731|ref|ZP_08510188.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
gi|333605752|gb|EGL17109.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
Length = 815
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/737 (59%), Positives = 577/737 (78%), Gaps = 11/737 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+E V + G G++ N PTL+ +LT +A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEVVSSNHGSGNNVN-TPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T++ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLKDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +P+ +E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPTPEEAIQILHGLRDRYEAHHRVKITDEAIEEAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDLIDEA S+VRL +P +ELE++L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYIPDRFLPDKAIDLIDEASSKVRLHSYTVPPSLKELEQKLENIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + + KE + G + VT DI +V++WTGIPV K+
Sbjct: 438 KAASLRDTEQKLREELDSTKNDWKE------KQGRMDTEVTPDDIAQVVASWTGIPVRKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLLKME+ LH RVIGQ+EAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 AEEETERLLKMEDILHNRVIGQEEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESLFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ I+K
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADTIKKNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M
Sbjct: 671 LGFTAVQD-SGKDYNNMKDKVMNELKKSFRPEFLNRIDEIIVFHSLDEKHIAEIVSLMAD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK ++++ +T+ + + +EG++PSYGARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLKEQEVDFILTDNAKNFLAKEGFDPSYGARPLRRAIQKHIEDRLSEELLKGSISK 789
Query: 815 GDSVIVDVDSDGNVTVL 831
GDS+ +D + DG + VL
Sbjct: 790 GDSLTID-EKDGELVVL 805
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLSLAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALVALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVESLIGRGQE 73
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/735 (61%), Positives = 578/735 (78%), Gaps = 12/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLTNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S +V GG ++ PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 140 QLLGNSEASVQ---GGSAASVSTPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVHNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 257 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP++DE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 317 DEYRKYIEKDAALERRFQPIQVDEPTIDESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FE
Sbjct: 377 SDRYIADRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELELKLEEVRKEKDAAVQSQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ ++ K+ KA+ G VT DI +VS+WTG+PV K+
Sbjct: 437 KAAALRDTEQKLREQL----EETKKSWKAKQ--GRENSEVTVDDIALVVSSWTGVPVTKL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLL +EE LH RVIGQ+EAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 AQTETERLLHLEEILHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 551 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFEEGGQLTEKVRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF NT++IMTSNVG+ +++ +
Sbjct: 611 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNVGADALKR-NKS 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D ++ Y +K V EELK+ FRPEFLNR+DE IVF L K + EI +M K
Sbjct: 670 VGFTIQ-DTVEADYKDMKDKVLEELKKAFRPEFLNRVDETIVFHSLEKKHLNEIVTLMAK 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ DRLK IEL +T+ +E+V E+GY+P YGARPLRR+I + +ED ++E+ML IKE
Sbjct: 729 ELSDRLKEHHIELVLTDAAKEKVAEKGYDPEYGARPLRRSIQKNIEDRLSEEMLKGNIKE 788
Query: 815 GDSVIVDVDSDGNVT 829
G V+VDV DG T
Sbjct: 789 GQKVLVDV-KDGEFT 802
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RL HN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRLKHNNIGTEHILLGLVREGEGIAAKALYGLGLSAEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 EEVETLIGNGQE 73
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/732 (59%), Positives = 575/732 (78%), Gaps = 13/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +VI L+ +E+R+LGH+YIG+EH+LL L+REGEGVAARVL N G + R QV+
Sbjct: 83 YTPRAKRVIELSVDESRKLGHSYIGTEHILLALIREGEGVAARVLNNAGVSLNKARQQVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G +VG+ S+ PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 143 QLLGNDESSVGSTSNNASAAT--PTLDSLARDLTEIAREGTLDPVIGRSKEITRVIEVLA 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ++ + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 201 RRTKNNPVLIGEPGVGKTAIAEGLAQQVVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+R+KK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 261 EDRMKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+V+ETIQI++GLR+RYE HH+++ TDEA+ +AA++
Sbjct: 321 DEYRKYIEKDAALERRFQPIQVDEPTVEETIQIIRGLRDRYEAHHRVKITDEAVEAAAKM 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEAGS+VRLR P +ELE +L I EKN AV+ Q+FE
Sbjct: 381 SDRYISDRFLPDKAIDLMDEAGSKVRLRSYTTPPNLKELEVKLEAIRSEKNAAVQSQEFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
KA RD E +K ++ KE K E+E VT DI +V+ WTG+PV+K
Sbjct: 441 KAASYRDTEQKMKEELETTKAAWKEKQGKTESE-------VTVDDIAAVVAMWTGVPVDK 493
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES +LLKMEE LH+RVIGQ+EAV AISRAIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 494 IAETESAKLLKMEEILHERVIGQNEAVLAISRAIRRARAGLKDPKRPIGSFIFLGPTGVG 553
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 554 KTELARALAEVMFGDEDAMIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKP 613
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG++ ++K R
Sbjct: 614 YSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVMIMTSNVGATELKK-NR 672
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF++ E D Y +K + ELK+ FRPEFLNR+D+MIVF L K +++I +M
Sbjct: 673 YVGFNIQDGESD--YEDMKEKMLSELKKTFRPEFLNRVDDMIVFHSLEKEHLRQIVSLMS 730
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+++ RL +DIEL +TE ++++ +EGY+P YGARPLRRA+ + +ED ++E++L ++
Sbjct: 731 EDLAKRLAEQDIELVLTEAAQDKITDEGYDPEYGARPLRRALQKHVEDRLSEELLEGKVL 790
Query: 814 EGDSVIVDVDSD 825
G+ V++DV+ D
Sbjct: 791 MGEKVVIDVNDD 802
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ LAQEEA RL H IG+EH+LLGL+REG G+AA+ L+ + + I
Sbjct: 4 MFNRFTQRAQKVLQLAQEEAIRLKHESIGTEHILLGLIREGGGIAAKALDAISVNADTIE 63
Query: 151 TQVIRMVGESTEAVG 165
+V +VG ++ VG
Sbjct: 64 REVEALVGVGSKDVG 78
>gi|258512699|ref|YP_003186133.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479425|gb|ACV59744.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 812
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/731 (60%), Positives = 579/731 (79%), Gaps = 14/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EHLLLGL+REGEGVAARVL N+ + + R QV+
Sbjct: 80 YTPRAKKVIELSIDEARKLGHSYVGTEHLLLGLIREGEGVAARVLANMNVNLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + AG S G PTL+ +LT++A +GKLDPV+GR+ +IERV+Q+L
Sbjct: 140 QLLGGDAMDI-AGDKDASVGT--PTLDSLARDLTQMARDGKLDPVIGREKEIERVIQVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI +GDVP+T+ K+V+ LDMG +VAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGDVPETLRNKRVMVLDMGTVVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 257 EDRLKKIMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKDPALERRFQP+ V EPS +E ++ILKGLR+RYE HH+++ TDEAL +A +L
Sbjct: 317 DEYRKHIEKDPALERRFQPIMVDEPSPEEALEILKGLRDRYEAHHRVKITDEALEAAVKL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA SRVRLR P +ELE++L ++ EK+ AV+ Q+FE
Sbjct: 377 SDRYISDRFLPDKAIDLIDEAASRVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A LRD E +K ++ L KE + + DV VT DI HIVS+WTGIPV+++
Sbjct: 437 LAASLRDEEQKIKEELERL----KETWQKTQQLDDVR--VTAEDIAHIVSSWTGIPVQQL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
DES+RLL +E+ LH+RVIGQDEAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 QQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 551 TELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+L+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG
Sbjct: 611 SVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-A 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D+ Y +K V +ELK+ FRPEFLNR+DE+IVF L + ++ I D M+
Sbjct: 670 LGFKREEDK----YLGMKDKVMDELKRTFRPEFLNRIDEIIVFHPLDETHIERIVDKMVD 725
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK ++IE ++T+ ++ + + G++P YGARPL+RAI+R +ED ++ ++A EIK+
Sbjct: 726 NLKRRLKEQEIEFELTDEAKKFLAKVGFDPQYGARPLQRAIVRNVEDLLSSALIAGEIKK 785
Query: 815 GDSVIVDVDSD 825
GD V++ VD D
Sbjct: 786 GDRVLLGVDGD 796
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFTE+A KV+ LAQEEA L H +G+EH+LLGL+REGEG+AA+ L+ LG ++
Sbjct: 2 MYARFTERAQKVLALAQEEASNLNHPGVGTEHILLGLIREGEGIAAKALQMLGVQADKVQ 61
Query: 151 TQVIRMVGESTEAVGA 166
++ RMVG V A
Sbjct: 62 QEIERMVGRGQTPVTA 77
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/738 (60%), Positives = 585/738 (79%), Gaps = 12/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E++ +G GGG+S PTL+ +LT +A EG+LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESM-SGHGGGASHVSTPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE + G VT DI +VS+WTGIPV K+
Sbjct: 438 KAASLRDMEQRLREELEETKRAWKE------KQGQENLEVTVEDIAAVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AETETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 612 SVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + + Y +KS V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M
Sbjct: 671 VGFNI--QDGNQQYKDMKSKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLKQIVRLMAD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI+L++TE E++ EG++P YGARPLRRA+ + +ED ++E++L I +
Sbjct: 729 TLVKRLKEQDIDLELTEAAIEKIAAEGFDPEYGARPLRRALQKHVEDRLSEELLKGTIAK 788
Query: 815 GDSVIVDVDSDGNVTVLN 832
G V+VDV DG VL+
Sbjct: 789 GQKVVVDV-KDGEFVVLS 805
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 62 KEVESLIGRGSE 73
>gi|381208304|ref|ZP_09915375.1| ATP-dependent Clp protease [Lentibacillus sp. Grbi]
Length = 810
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/738 (58%), Positives = 580/738 (78%), Gaps = 9/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV+ L+Q+EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVVELSQDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+++G + G S N PTL+ +LT+ A+EG +DPV+GR +IERV+Q+L
Sbjct: 140 QLLGSNESQAGRHNRSSQSSNANTPTLDSLARDLTESAKEGNVDPVIGRSQEIERVIQVL 199
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTA+AEGLAQ+I + ++P+ + K+V+TLDMG +VAGTKYRGE
Sbjct: 200 SRRTKNNPVLIGEPGVGKTAVAEGLAQQIVNNEIPEILRDKRVMTLDMGTVVAGTKYRGE 259
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+MEEI+Q++ IILFIDE+HTLIGAG AEGAIDA+NILKP+L+RGELQCIGATT
Sbjct: 260 FEDRLKKVMEEIRQANNIILFIDELHTLIGAGGAEGAIDASNILKPALSRGELQCIGATT 319
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP++DET+QILKGLR+RYE HH++ DE++ +AA
Sbjct: 320 LDEYRKYIEKDAALERRFQPIQVDEPTLDETVQILKGLRDRYEAHHRVTIPDESIEAAAN 379
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DRFLPDKAIDLIDEAGS+VRL +P + +ELE++L + KEK+ AV+ Q+F
Sbjct: 380 LSDRYITDRFLPDKAIDLIDEAGSKVRLSSYTVPPDLKELEQKLDDVRKEKDSAVQSQEF 439
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD E L+ ++ +K KE + G VT DI +VS WTG+PV +
Sbjct: 440 EKAASLRDSEQRLREELEETKNKWKE------KQGQKDSEVTVEDIAKVVSIWTGVPVSR 493
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ DES+RLL +EETLH RVIGQ+EAV+A+++AIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 494 LTKDESERLLNLEETLHNRVIGQEEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVG 553
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA F EEAMIR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VR +P
Sbjct: 554 KTELARALAESMFADEEAMIRIDMSEYMEKHATSRLVGSPPGYVGYDEGGQLTEKVRTKP 613
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DE+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG++ + K +
Sbjct: 614 YSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNVGANEL-KRNK 672
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF LD D+++ Y +K+ VT+ELK+ FRPEFLNR+DE IVF L + +K I ++M+
Sbjct: 673 YVGFALD-DDQEQDYQNMKTKVTDELKKAFRPEFLNRIDETIVFHSLERKHMKYIVNLMI 731
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ RL +DIE +T++ E++ EG++P YGARPLRR+I + +ED ++E++L +
Sbjct: 732 KQLQSRLIQQDIEFTLTDKAVEKIANEGFDPEYGARPLRRSIQKNIEDMLSEELLKENFQ 791
Query: 814 EGDSVIVDVDSDGNVTVL 831
+G+ V + +++ G +L
Sbjct: 792 KGEKVKIGLNNKGEFIIL 809
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 56/68 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RLGHN IG+EH+LLGL+REG G+AA+ LE+LG + + I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAVRLGHNNIGTEHILLGLVREGNGIAAKALESLGLEVTKIQ 61
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 62 QEVEKLIG 69
>gi|389816088|ref|ZP_10207275.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
gi|388465352|gb|EIM07670.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
Length = 818
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/732 (60%), Positives = 572/732 (78%), Gaps = 13/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH+YIG+EHLLL L+REGEGVAARVL N G + R QV+
Sbjct: 80 YTPRAKKVIELSVDESRKLGHSYIGTEHLLLALIREGEGVAARVLGNAGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E G +S N PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 140 QLLG-SNEQASTGTSPNASAN-TPTLDGLARDLTQVAREGGLDPVIGRSDEITRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+ LDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEIPETLRDKRVMVLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPSV+E+IQI++GLR+RYE HH+++ TDEA+ +AA++
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDEPSVEESIQIIRGLRDRYEAHHRVKITDEAIEAAAKM 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR +P + +ELE L EKNEAV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTIPPDLKELESRLEAARSEKNEAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
KA LRD E L+ Q+ + KE K E+E VT DI +VS WTGIPV K
Sbjct: 438 KAASLRDAEQKLQNQLDKTKKEWKEKQGKEESE-------VTVEDIAKVVSMWTGIPVSK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESD+LL +E LH RVIGQDEAV +IS+AIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 LAQTESDKLLNLEAILHNRVIGQDEAVTSISKAIRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDEDAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K +
Sbjct: 611 YSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNVGAEEL-KYNK 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+L D+ + Y +K + ELK+ FRPEFLNR+D+MIVF L K ++EI ++M
Sbjct: 670 YVGFNL--DDAKTDYKDMKGKMLAELKKAFRPEFLNRVDDMIVFHSLEKENLREIVNLMT 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ DRLK +DI+L++TE E+V +EGY+P YGARPLRR++ + +ED ++E++L
Sbjct: 728 KQLVDRLKEQDIDLELTEAALEKVAKEGYDPEYGARPLRRSLQKHVEDRLSEELLKGTAL 787
Query: 814 EGDSVIVDVDSD 825
+I DV+ +
Sbjct: 788 SDQKIIFDVEDN 799
>gi|323490586|ref|ZP_08095791.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
gi|323395678|gb|EGA88519.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
Length = 820
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/739 (60%), Positives = 573/739 (77%), Gaps = 13/739 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH+YIG+EHLLL L+REGEGVAARVL N G + R QV+
Sbjct: 81 YTPRAKKVIELSVDESRKLGHSYIGTEHLLLALIREGEGVAARVLGNAGVSLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E G +S N PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 141 QLLG-SNEQTSTGTSPNASAN-TPTLDGLARDLTQVAREGGLDPVIGRSDEITRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+ LDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEIPETLRDKRVMVLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPSV+E+IQI++GLR+RYE HH+++ TDEA+ +AA++
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPSVEESIQIIRGLRDRYEAHHRVKITDEAIEAAAKM 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P + +ELE L EKNEAV+ Q+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTTPPDLKELESRLEAARSEKNEAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
KA LRD E L+ Q+ + KE K E+E VT DI +VS WTGIPV K
Sbjct: 439 KAASLRDAEQKLQNQLDKTKKEWKEKQGKEESE-------VTVEDIAKVVSMWTGIPVSK 491
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESD+LL +E LH RVIGQ+EAV +IS+AIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 492 LAQTESDKLLNLESILHNRVIGQNEAVTSISKAIRRARAGLKDPKRPIGSFIFLGPTGVG 551
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG EEAMIR+DMSE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 552 KTELARALAESMFGDEEAMIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKP 611
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K +
Sbjct: 612 YSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNVGAEEL-KYNK 670
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+L+ + D Y +K + ELK+ FRPEFLNR+D+MIVF L K ++EI ++M
Sbjct: 671 YVGFNLEDAKTD--YKDMKGKMLAELKKAFRPEFLNRVDDMIVFHSLEKENLREIVNLMT 728
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ DRLK +DI+L++T+ E+V EGY+P YGARPLRR++ + +ED ++E++L
Sbjct: 729 KQLVDRLKEQDIDLELTDAALEKVANEGYDPEYGARPLRRSLQKHVEDRLSEELLKGTAL 788
Query: 814 EGDSVIVDVDSDGNVTVLN 832
G +I DV+ D V N
Sbjct: 789 SGQKMIFDVEGDEFVVRTN 807
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/728 (60%), Positives = 573/728 (78%), Gaps = 11/728 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ G GG S+ PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNES-GGHQGGASASANTPTLDGLARDLTSIAREGSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ +E+IQIL+GLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIRVDEPTAEESIQILEGLRDRYEAHHRVSITDEAIQAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE +L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTTPPNLKELEVKLDEVRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE E VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQLEETKKTWKEKQGKENNE------VTVEDIASVVSSWTGVPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+ +LL +EE LH R+IGQ+EAV A+S+A+RRAR GLK+P RPI SF+F GPTGVGK
Sbjct: 492 AETETAKLLNLEEILHSRIIGQEEAVIAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 612 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEQLKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++D Y +K V EELK+ FRPEFLNR+DE+IVF L + + EI ++ +
Sbjct: 671 VGFNIQDGQQD--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALERKHLNEIVTLLSE 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +DI L++T+ +E++ +EGY+P YGARPLRRAI + +ED ++E++L +
Sbjct: 729 QLIKRLKEQDISLELTDAAKEKISQEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTLLT 788
Query: 815 GDSVIVDV 822
G +VI+DV
Sbjct: 789 GQNVIIDV 796
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYGLGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G+ E
Sbjct: 62 KEVENLIGKGQE 73
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/736 (60%), Positives = 574/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 81 YTPRAKKVIELSMDEARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + + G G ++ N PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 141 QLLGSNESSGGHSGGASANVN-TPTLDSLARDLTAVAREGSLDPVIGRSKEIQRVIEVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I S +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVSNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ E+IQIL+GLR+RYE HH++ TDEA+ A +L
Sbjct: 320 DEYRKYIEKDAALERRFQPITVDEPTTAESIQILRGLRDRYEAHHRVSITDEAIEQAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE +L + EK+ AV+ Q+FE
Sbjct: 380 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEVKLESVRNEKDAAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE E VT DI +VS+WTGIPV K+
Sbjct: 440 KAASLRDTEQRLREQLEETKKTWKEKQGQENSE------VTVEDIAMVVSSWTGIPVSKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAVKA+S+A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 AQTETDKLLNMESLLHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 554 TELARALAESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ +++ +
Sbjct: 614 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTLVIMTSNVGADALKR-NKY 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ +++ +Y +K V EELK+ FRPEFLNR+DEMIVF L K +KEI ++ +
Sbjct: 673 VGFNV--QDENQNYKDMKGKVMEELKKAFRPEFLNRVDEMIVFHSLEKTHLKEIVTLLSE 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +DI+L++TE +E++ EEGY+P YGARPLRRAI + +ED ++E++L I++
Sbjct: 731 QLTKRLKEQDIDLELTEAAKEKISEEGYDPEYGARPLRRAIQKHVEDKLSEELLRGNIEK 790
Query: 815 GDSVIVDVDSDGNVTV 830
G + +DV DG V
Sbjct: 791 GKKISLDV-VDGEFVV 805
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 10/88 (11%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALIALGLGPEKIQ 61
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNKMP 178
+V ++G G SG +P
Sbjct: 62 KEVENLIGR----------GQDSGQSIP 79
>gi|326203327|ref|ZP_08193192.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986585|gb|EGD47416.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
Length = 810
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/738 (58%), Positives = 582/738 (78%), Gaps = 9/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ LA +EARR+G YIG+EHLLLG+++EGE VA R++ +LG DP + ++I
Sbjct: 80 FTPRTKRVLELAFKEARRMGQGYIGTEHLLLGIMKEGESVAVRIMMDLGVDPQKLLNELI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ E + SS + PTL ++G +LT +A +GK+DPV+GR +IERV+QIL
Sbjct: 140 KILTEESPGSNGSTKSNSSNSNTPTLNQFGRDLTDMARDGKIDPVIGRDKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ + K+V+TLD+ +VAG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILSDKRVVTLDLSSMVAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK MEEI+++ +ILFIDE+HT++GAGAAEGAIDA+NILKPSLARGE+Q IGATTL
Sbjct: 260 EDRLKKAMEEIRKAVNVILFIDELHTIVGAGAAEGAIDASNILKPSLARGEIQVIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+EYRKHIEKD ALERRFQP+ V EPS +E ++ILKG+R++YE HH+++ TD+A+ +A +L
Sbjct: 320 NEYRKHIEKDAALERRFQPITVGEPSKEEAVEILKGVRDKYEAHHRVKITDDAIEAAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+YI+DRFLPDKAIDLIDEA SR+RL+ P + +E+E+++ +++KEK +A+R Q+FE
Sbjct: 380 GDRYITDRFLPDKAIDLIDEAASRIRLKTFTAPPDLKEMEEKVEKLSKEKEDAIRCQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD E LK ++ + D+ ++ ++ +T+ VTE DI IV++WTGIPV+++
Sbjct: 440 KAARIRDDEQKLKNELDKVRDQWRQKNQTKTDT------VTEDDIADIVASWTGIPVKRL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLLKMEETLHKRVIGQDEAVK+IS+AIRR RVGLK+P RP+ SFIF GPTGVGK
Sbjct: 494 AEEESERLLKMEETLHKRVIGQDEAVKSISKAIRRGRVGLKDPKRPVGSFIFMGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E++MIR+DMSEFME+H+VSKL+GSPPGYVGY EGGQLTE VRRRPY
Sbjct: 554 TELCKALAEAMFGDEKSMIRVDMSEFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRRPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPD+FN++LQILEDGRLTDS+GR VDF+NT++IMTSNVG+ I + +R
Sbjct: 614 SVLLFDEIEKAHPDIFNILLQILEDGRLTDSQGRVVDFRNTIIIMTSNVGARTITE-PKR 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF DE +Y +K+ V ELK+ FRPEFLNR+D++IVF L+K +KEI +ML
Sbjct: 673 LGFSTSNDESAKNYEDMKNNVMGELKKMFRPEFLNRIDDIIVFHPLSKENIKEIVRLMLD 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ +RLK +I ++V+E + ++G++P +GARPLRRAI ++ED +AE ML ++K
Sbjct: 733 VLVNRLKANEIAMEVSEEAMGHLAQKGFDPVFGARPLRRAIQSMVEDKLAEDMLEGKVKA 792
Query: 815 GDSVIVDVDSDGNVTVLN 832
GDS+ +D DG V+N
Sbjct: 793 GDSIRIDF--DGENIVIN 808
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 41/49 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVL 139
M++RFTEKA + I +Q+ A LGHNY+G+EH+LLGL++EG GVA+RVL
Sbjct: 1 MYQRFTEKAERAIGFSQQAAVDLGHNYVGTEHILLGLVKEGTGVASRVL 49
>gi|218290044|ref|ZP_03494211.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239878|gb|EED07066.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 812
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/731 (60%), Positives = 579/731 (79%), Gaps = 14/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EHLLLGL+REGEGVAARVL N+ + + R QV+
Sbjct: 80 YTPRAKKVIELSIDEARKLGHSYVGTEHLLLGLIREGEGVAARVLANMNVNLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + AG S G PTL+ +LT++A +GKLDPV+GR+ +IERV+Q+L
Sbjct: 140 QLLGGDAMDI-AGDKDASVGT--PTLDSLARDLTQMARDGKLDPVIGREKEIERVIQVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI +GDVP+T+ K+V+ LDMG +VAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGDVPETLRNKRVMVLDMGTVVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 257 EDRLKKIMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKDPALERRFQP+ V EPS +E ++ILKGLR+RYE HH+++ TDEAL +A +L
Sbjct: 317 DEYRKHIEKDPALERRFQPIMVDEPSPEEALEILKGLRDRYEAHHRVKITDEALEAAVKL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA SRVRLR P +ELE++L ++ EK+ AV+ Q+FE
Sbjct: 377 SDRYISDRFLPDKAIDLIDEAASRVRLRTHTAPPNLKELEQKLEKVRSEKDAAVQSQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A LRD E +K ++ L KE + + DV VT DI HIVS+WTGIPV+++
Sbjct: 437 LAASLRDEEQKIKEELERL----KETWQKTQQLDDVR--VTAEDIAHIVSSWTGIPVQQL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
DES+RLL +E+ LH+RVIGQDEAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 QQDESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+MERH+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 551 TELARALAEALFGDEDALIRIDMSEYMERHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+L+DGRLTD KGRTVDF+NT++IMTSNVG+ + KGG
Sbjct: 611 SVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNVGAEELRKGG-A 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D+ Y +K V +ELK+ FRPEFLNR+DE+IVF L + ++ I D M+
Sbjct: 670 LGFKREEDK----YLGMKDKVMDELKRTFRPEFLNRIDEIIVFHPLDETHIERIVDKMVD 725
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK ++IE ++T+ ++ + + G++P YGARPL+RAI+R +ED ++ ++A EIK+
Sbjct: 726 NLKRRLKEQEIEFELTDEAKKFLAKVGFDPQYGARPLQRAIVRNVEDLLSSALIAGEIKK 785
Query: 815 GDSVIVDVDSD 825
GD V++ V+ D
Sbjct: 786 GDRVLLGVNGD 796
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFTE+A KV+ LAQEEA RL H +G+EH+LLGL+REGEG+AA+ L+ LG ++
Sbjct: 2 MYARFTERAQKVLALAQEEASRLNHPGVGTEHILLGLIREGEGIAAKALQMLGVQADKVQ 61
Query: 151 TQVIRMVGESTEAVGA 166
++ RMVG V A
Sbjct: 62 QEIERMVGRGQTPVTA 77
>gi|169830395|ref|YP_001716377.1| ATPase [Candidatus Desulforudis audaxviator MP104C]
gi|169637239|gb|ACA58745.1| ATPase AAA-2 domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 812
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/751 (58%), Positives = 595/751 (79%), Gaps = 13/751 (1%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
G+ GG +V+ F T +A KV+ L+ +EARRLGH+Y+G+EH+LLGL+REGEGVAA+VL
Sbjct: 70 GQGGGALVEVSF---TPRAKKVLELSIDEARRLGHSYVGTEHILLGLIREGEGVAAQVLT 126
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGA-GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
+GAD +R +++ +G A G G + P L++Y +LT L+ +GKLDPV
Sbjct: 127 GMGADLERVRHLILQFLGGPGPAEGVPGRAQQPAQTNTPNLDQYARDLTALSRDGKLDPV 186
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
+GR +IERV+QIL RRTKNNP LIG+PGVGKTAIAEGLAQRI+ G+VP+ + GK+VI L
Sbjct: 187 IGRNREIERVIQILSRRTKNNPVLIGDPGVGKTAIAEGLAQRISDGNVPEVLTGKRVIAL 246
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+ LVAGTKYRGEFEERLKK++EEI+ + I+LFIDE+HTL+GAGAAEGAIDAANILKP
Sbjct: 247 DLASLVAGTKYRGEFEERLKKVLEEIRTAGNIVLFIDELHTLVGAGAAEGAIDAANILKP 306
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGELQ IGATTLDEYRKH+E+DPALERRFQP+ V EP+V+ETI IL+GLR+RYE HH
Sbjct: 307 ALARGELQTIGATTLDEYRKHVERDPALERRFQPIMVEEPTVEETIAILRGLRDRYEAHH 366
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
++R TD+AL SAA+LS +YI+DRFLPDKAIDLIDEAGSRVRL+ +P E +ELE+ + +
Sbjct: 367 RVRITDDALESAARLSDRYIADRFLPDKAIDLIDEAGSRVRLQAFTMPPELKELEQRVEE 426
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ KEK AV Q+FEKA +LRD+E ++A++ + ++ ++ + G VV E DI
Sbjct: 427 LRKEKEAAVAAQEFEKAAQLRDQEQKMRAELQSSLEDWRQ------QKGGDELVVDEQDI 480
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
HI+S+WTGIPV+K++ +E+++LL+ME+ LH+RV+GQDEAV+A+SRAIRRAR GLK+P R
Sbjct: 481 AHIISSWTGIPVKKLAEEETEKLLRMEDLLHERVVGQDEAVRAVSRAIRRARAGLKDPRR 540
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PI SFIF GPTGVGK+ELA+AL FG E+A++R+DMSE+ ERHTVS+L+G+PPGYVGY
Sbjct: 541 PIGSFIFLGPTGVGKTELARALGEALFGDEDALVRIDMSEYQERHTVSRLVGAPPGYVGY 600
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTEAVRRRPYTVVL DEIEKAHP+VFN++LQ+LEDGRLTD++GRTVDF+NT++I+
Sbjct: 601 DEGGQLTEAVRRRPYTVVLLDEIEKAHPEVFNILLQVLEDGRLTDARGRTVDFRNTVIIL 660
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSNVG ++I+K ++GF + +++ ++Y R+K V EL + FRPEFLNRLDE+IVF
Sbjct: 661 TSNVGVNLIQKET-KMGF-VTVEDQAATYERMKEKVIGELHRTFRPEFLNRLDEIIVFHA 718
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LT +++I ++ML++V RL+ +++++ ++ ++ + EG++ +GARPLRR I R +
Sbjct: 719 LTGAHIRQIVELMLQDVARRLEENEVQVEFSDEVKDLLAREGFDEKFGARPLRRTIQRRI 778
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
ED ++E+++ K GD +++D D +TV
Sbjct: 779 EDKLSEELIRGAFKRGDRLLLDA-RDEEITV 808
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFT +A KVIMLAQEEAR+LG+ YIG+EHLLLGL+REGEGVAAR L + DP IR
Sbjct: 1 MYGRFTRRAQKVIMLAQEEARKLGYPYIGTEHLLLGLIREGEGVAARALAEIKIDPRKIR 60
Query: 151 TQVIRMVGESTEAVGAGVGGGS 172
+ +M V G GGG+
Sbjct: 61 AAIEKM-------VEPGQGGGA 75
>gi|15612666|ref|NP_240969.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
Length = 813
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/730 (59%), Positives = 569/730 (77%), Gaps = 9/730 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + + + GGG++ PTL+ +LT +A E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLGSNETSSSSQQGGGAANANTPTLDSLARDLTAIAREEGLDPVIGRSKEIERVIQVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQAIIHNEVPETLRNKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPS+DE+IQILKGLR+RYE HH++ TDEA+ A +L
Sbjct: 320 DEYRKYIEKDAALERRFQPIQVNEPSLDESIQILKGLRDRYEAHHRVTITDEAIEEAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDLIDEA S+VRLR P +ELE++L + KEK+ AV+ Q+FE
Sbjct: 380 SDRYIQDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQKLEETRKEKDAAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ + + K+ E VV + DI +V++WTGIPV K+
Sbjct: 440 KAASLRDSEQRIREELDQMKNDWKQKQGQENTQ-----VVVD-DIAQVVASWTGIPVSKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLLKMEE LHKRVIGQ+EAVKAIS+A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 AEEETERLLKMEEILHKRVIGQEEAVKAISKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+A IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 554 TELARAVAETLFGDEDAFIRIDMSEYMEKHATSRLVGSPPGYVGHDEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S + K +
Sbjct: 614 SVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAVIMTSNVGASTLRK-NKF 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + S Y +K V ELK FRPEFLNR+DE+IVF L K V+EI +M
Sbjct: 673 LGFTTDSE--GSEYKDMKDKVMTELKNSFRPEFLNRIDEIIVFHSLEKKHVREIITLMAD 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL+ + + ++TE ++++ + GY+P YGARPLRRA+ R +ED ++E++L I++
Sbjct: 731 QLKKRLEEQGVSFELTEAAKDKITDLGYDPEYGARPLRRALQREVEDRLSEELLKGTIQK 790
Query: 815 GDSVIVDVDS 824
G I+DV++
Sbjct: 791 GQRAIIDVEN 800
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALQALGLGPEKIQ 61
Query: 151 TQVIRMVGE 159
+V ++G+
Sbjct: 62 KEVETLIGK 70
>gi|410666747|ref|YP_006919118.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
gi|409104494|gb|AFV10619.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
Length = 820
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/734 (60%), Positives = 577/734 (78%), Gaps = 11/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KV+ LAQEE RR G +Y+G+EH+LLGL+REGEGVAAR+L G +R QV+
Sbjct: 81 LTPRAKKVLELAQEEGRRQGVSYVGTEHILLGLIREGEGVAARILLAQGLSLDKVRRQVL 140
Query: 155 RMVGESTEAVGAG---VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
++G V G G ++ PTL+E G +LT+LA EGKLDPV+GR+ +IERV+Q
Sbjct: 141 MLLG-GIGPVSPGHPQAGASRRASQTPTLDELGRDLTQLAREGKLDPVIGREQEIERVIQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNPCLIGEPGVGKTAIAEGLAQRI VP+ + K+V+TLDM +VAGTKYR
Sbjct: 200 VLSRRTKNNPCLIGEPGVGKTAIAEGLAQRIVENKVPEILADKRVVTLDMSSVVAGTKYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEERL+K+++EI+ + IILFIDEVHTL+GAGAAEGAIDAANILKP+LARGELQCIGA
Sbjct: 260 GEFEERLRKVIDEIRNAGNIILFIDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK+IEKD ALERRFQPV V EP+V+ETI+IL+GLR+RYE HH+++ TD AL +A
Sbjct: 320 TTLDEYRKNIEKDAALERRFQPVMVGEPTVEETIEILRGLRDRYEAHHRVKITDGALKAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A+LS +YI+DRFLPDKAIDL+DEA SRVRL+ P +ELE++L ++ KEK AV Q
Sbjct: 380 ARLSDRYITDRFLPDKAIDLMDEAASRVRLKAYTAPPAVKELEEKLERLQKEKESAVVSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+FEKA LRD+E ++ ++ + K + + E + +VT+ DI I+S+WTGIPV
Sbjct: 440 EFEKAASLRDQEQQVREELEKI--KSNWVQRKELDQS----IVTDEDIAAIISSWTGIPV 493
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K+ +ES+RLL+MEE LH+RVIGQDEAVKA++RA+RR+R GLK+P RPI SFIF GPTG
Sbjct: 494 SKLQEEESERLLRMEEILHQRVIGQDEAVKAVARAMRRSRAGLKDPKRPIGSFIFLGPTG 553
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG EEAM+R DMSE+ME+HTVS+L+G+PPGYVGY E GQLTEAVRR
Sbjct: 554 VGKTELARALAEALFGDEEAMVRFDMSEYMEKHTVSRLLGAPPGYVGYEEAGQLTEAVRR 613
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
RPY+VVLFDEIEKAHPD+F+++LQ++EDGRLTD+KGRTVDF+NT++IMTSNVG+++I++
Sbjct: 614 RPYSVVLFDEIEKAHPDIFHVLLQVMEDGRLTDAKGRTVDFRNTVIIMTSNVGANLIKR- 672
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
R+GF + + Y +K +T+EL++ FRPEFLNR+DE+IVF L + +K+I +
Sbjct: 673 EHRLGFKAGERQDELDYEAMKERITDELRRTFRPEFLNRVDEIIVFHPLNEEHMKKIVGL 732
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
MLK + R+ + L+ T+ E +V++GY+P++GARPLRR I R++ED ++E+MLA +
Sbjct: 733 MLKNISKRIAEYGLHLEFTKEAEELLVKKGYDPTFGARPLRRVIQRMVEDELSEEMLAGK 792
Query: 812 IKEGDSVIVDVDSD 825
K GD+V+VD D
Sbjct: 793 FKAGDAVLVDAGED 806
>gi|218185563|gb|EEC67990.1| hypothetical protein OsI_35764 [Oryza sativa Indica Group]
Length = 853
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/644 (67%), Positives = 543/644 (84%), Gaps = 18/644 (2%)
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GKLDPVVGRQ QI+ VVQIL RRTKNNPCLIGEPGVGKTAIAEGLAQ IA+GDVP+TI+
Sbjct: 214 KGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQ 273
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K VI+LDMGLLVAGTKYRGE EERLK ++EEIKQ+ EIILF+DEVHTL+ AG+AEGAID
Sbjct: 274 QKTVISLDMGLLVAGTKYRGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGAID 333
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANI KP+LARGELQCIGATT++EYRKHIEKD ALERRFQPVK+PE +V ET+ ILKGLR
Sbjct: 334 AANIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVKIPESTVVETVGILKGLR 393
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL--PEEA 430
ERY+ HHK++YTDEALV+AA+LS+++I DRFLPDKAIDL+DEAGS VRLR+AQ ++
Sbjct: 394 ERYQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQCKPSKKV 453
Query: 431 RELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV 490
+LE EL++ KEKN+A+ Q+F +A +LRD E+ L+ ISAL DK +M + + A
Sbjct: 454 NDLEAELKKTLKEKNDAISIQNFRRAKQLRDHELQLRTNISALTDKKTQMMEPDAIA--- 510
Query: 491 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
PVVTE D++H +S WTG+P+ KVS DES +LLK+E+ LH+RV+GQ EAV A+SRAIRRA
Sbjct: 511 MPVVTEDDVRHAISRWTGVPLHKVSMDESRKLLKLEDALHRRVVGQGEAVAAVSRAIRRA 570
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE----AMIRLDMSEFMERHTV 606
R+GLK+P RP+AS +F+GPTGVGKSELAKALAA Y+GS E AM+RLDMSE+ME+H V
Sbjct: 571 RLGLKHPGRPVASLVFAGPTGVGKSELAKALAACYYGSSESEEAAMVRLDMSEYMEKHAV 630
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
++L+GSPPGYVG+ EGGQLTEAVRRRP+ VVL DE+EKAH DVF+++LQ+L+DGRLTD K
Sbjct: 631 ARLVGSPPGYVGHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGK 690
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 726
GRTVDFKNTL++MT+N+GSS+I + + ++ RIK+ VT+E+K++FRPE
Sbjct: 691 GRTVDFKNTLIVMTTNIGSSLIVN---------NGGDGAAAAGRIKNTVTDEMKRHFRPE 741
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVF+ LT+LEV +IA IML+E R++ K I+L+VT++FRE VVEEG++PSY
Sbjct: 742 FLNRLDEVIVFQPLTELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSY 801
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA++RLLED++AEKMLA E++EGDSVIVD DS GN V
Sbjct: 802 GARPLRRAVVRLLEDTLAEKMLAGEVREGDSVIVDADSAGNAVV 845
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/730 (59%), Positives = 573/730 (78%), Gaps = 12/730 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ GGG++ PTL+ +LT +A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNES--GHQGGGTANANTPTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 257 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ DE+I ILKGLR+RYE HH++ TDEA+ +A L
Sbjct: 317 DEYRKYIEKDAALERRFQPIRVDEPTADESILILKGLRDRYEAHHRVSITDEAIEAAVSL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDLIDEAGS+VRLR P +ELE +L + KEK+ AV+ Q+FE
Sbjct: 377 SDRYIPDRFLPDKAIDLIDEAGSKVRLRSYTTPPNLKELEVKLEVVRKEKDAAVQSQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE E VT DI +V+ WTGIPV K+
Sbjct: 437 KAASLRDSEQRLREQLEETKKTWKEKQGQENSE------VTVEDIATVVANWTGIPVSKL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LLK+EE +H RVIGQ+EAV A+S+A+RRAR GLK+P RPI SF+F GPTGVGK
Sbjct: 491 AQTETDKLLKLEEIIHSRVIGQEEAVVAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 551 TELARALAEAMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+ +++ +
Sbjct: 611 SVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNVGAEALKR-NKY 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ +D Y +K V EELK+ FRPEFLNR+DE+IVF L + ++K+I ++ +
Sbjct: 670 VGFNIQDGAQD--YKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALERAQLKQIVTLLSE 727
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK + I+L++T+ ++++ +EGY+P YGARPLRRAI + +ED ++E++L +
Sbjct: 728 QLIKRLKDQHIQLELTDAAKDKISDEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLT 787
Query: 815 GDSVIVDVDS 824
G ++++DVD+
Sbjct: 788 GHNIMIDVDN 797
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RL HN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLSHNNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G EA
Sbjct: 62 KEVENLIGRGQEA 74
>gi|376259729|ref|YP_005146449.1| chaperone ATPase [Clostridium sp. BNL1100]
gi|373943723|gb|AEY64644.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. BNL1100]
Length = 810
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/736 (57%), Positives = 581/736 (78%), Gaps = 8/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ LA +EARR+G YIG+EHLLLG+++EGE VA R++ +LG DP + +++
Sbjct: 80 FTPRTKRVLELAFKEARRMGQGYIGTEHLLLGIMKEGESVAVRIMMDLGVDPQKLLNELV 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ E + +S + PTL ++G +LT +A +GK+DPV+GR +IERV+QIL
Sbjct: 140 KILTEESPGSNGSAKSSNSNSNTPTLNQFGRDLTDMARDGKVDPVIGRDKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ + K+V+TLD+ +VAG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILSDKRVVTLDLSSMVAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK MEEI+++ +ILFIDE+HT++GAGAAEGAIDA+NILKPSLARGE+Q IGATTL
Sbjct: 260 EDRLKKAMEEIRKTTNVILFIDELHTIVGAGAAEGAIDASNILKPSLARGEIQVIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+EYRKHIEKD ALERRFQP+ V EPS +E ++ILKG+R++YE HH+++ TD+AL +A +L
Sbjct: 320 NEYRKHIEKDAALERRFQPITVGEPSKEEAVEILKGVRDKYEAHHRVKITDDALEAAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+YI+DRFLPDKAIDLIDEA SR+RL+ P + +E+E+ + +++KEK +A+R Q+FE
Sbjct: 380 GDRYITDRFLPDKAIDLIDEAASRIRLKTFTAPPDLKEMEERVEKLSKEKEDAIRCQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD E LK ++ + D+ + ++ +T+ VTE +I IV++WTGIPV+++
Sbjct: 440 KAARIRDDEQKLKNELDKIRDQWHQKNQTKTDT------VTEDEIADIVASWTGIPVKRL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLLKMEETLHKRVIGQDEAVK+IS+AIRR RVGLK+P RP+ SFIF GPTGVGK
Sbjct: 494 AEEESERLLKMEETLHKRVIGQDEAVKSISKAIRRGRVGLKDPKRPVGSFIFMGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E++MIR+DMSEFME+H+VSKL+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 554 TELCKALAEAMFGDEKSMIRVDMSEFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPD+FN++LQILEDGRLTDS+GR VDF+NT++IMTSNVG+ I + +R
Sbjct: 614 SVLLFDEIEKAHPDIFNILLQILEDGRLTDSQGRVVDFRNTIIIMTSNVGARTITE-PKR 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF DE +Y +K+ V ELK+ FRPEFLNR+D++IVF L+K +KEI +ML
Sbjct: 673 LGFSASNDESAKNYEDMKNNVMGELKKMFRPEFLNRIDDIIVFHPLSKENIKEIVRLMLD 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ +RLK +I ++V+E + + ++G++P +GARPLRRAI ++ED +AE ML ++K
Sbjct: 733 VLVNRLKANEITMEVSEEAMDYLAQKGFDPVFGARPLRRAIQSMVEDKLAEDMLEGKVKA 792
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+ +D D + N+ V
Sbjct: 793 GDSIRIDFDGE-NIVV 807
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLG 143
M++RFTEKA + I +Q+ A LGHNY+G+EH+LLGL++EG GVAARVL+ G
Sbjct: 1 MYQRFTEKAERAIGFSQQAAVDLGHNYVGTEHILLGLVKEGTGVAARVLQGQG 53
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/735 (59%), Positives = 571/735 (77%), Gaps = 10/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + + GG + PTL+ +LT++A EG LDPV+GR +I+RV+++L
Sbjct: 140 QLLGSNESTSSSHSGGVVANANTPTLDSLARDLTQIAREGSLDPVIGRGKEIQRVIEVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVQNEVPEILRNKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ +E IQIL GLR+RYE HH++ TDEA+ A +L
Sbjct: 320 DEYRKYIEKDAALERRFQPIQVGEPTQEEAIQILYGLRDRYEAHHRVSITDEAIEEAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAG++VRLR P +ELE++L +I KEK+ AV+ Q+FE
Sbjct: 380 SARYISDRFLPDKAIDLIDEAGAKVRLRSYTAPPNLKELEQKLEEIRKEKDAAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ + + KE E VT DI +VSAWTG+PV K+
Sbjct: 440 KAASLRDTEQRLREDVEKTKKEWKERQGKENSE------VTTEDIALVVSAWTGVPVSKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+DRLL ME LH RVIGQ+EAVKAI++AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 AQAETDRLLNMESILHSRVIGQEEAVKAIAKAIRRARSGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VRR+P+
Sbjct: 554 TELARALAEAMFGDEDALIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRRKPF 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+S +++ +
Sbjct: 614 SVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGASELKR-NKY 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ Y +KS V + LK+ FRPEFLNR+DE+IVF L K + EI +M
Sbjct: 673 VGFNV---QEGQEYKDMKSKVMDALKKAFRPEFLNRIDEIIVFHSLEKQHINEIITLMAN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK +DI+ +++ +E++ EG++P YGARPLRRA+ + +ED ++E++L I++
Sbjct: 730 ELTKRLKEQDIDFALSDAAKEKIANEGFDPEYGARPLRRALQKQVEDRLSEELLKGTIQK 789
Query: 815 GDSVIVDVDSDGNVT 829
G +I+DV++D V
Sbjct: 790 GHKIIIDVENDDYVV 804
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH+ IG+EH+LLGL+REGEG+AA+ L L P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHSNIGTEHILLGLIREGEGIAAKALLALNLGPEKIQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G EA
Sbjct: 62 EEVEALIGRGDEA 74
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/736 (59%), Positives = 575/736 (78%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E V + G ++ N PTL+ +LT +A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SNEVVSSNHGSTNNVN-TPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ D ++ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKIPDVSIETAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRLR +P +ELE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELESRLENIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ ++ KE + G VT DI +V++WTGIPV K+
Sbjct: 438 KAASLRDTEQKLREELEVTKNEWKE------KQGRTDSEVTPEDIAQVVASWTGIPVIKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLLKME+ LH RVIGQ EAVKA+S+AIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETERLLKMEDILHSRVIGQSEAVKAVSQAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGDENAIIRIDMSEYMEKHSTSRLVGAPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ +I+K
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADLIKKNS-A 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M +
Sbjct: 671 LGFTANLD-AGHDYNNMKDKVMTELKKSFRPEFLNRIDELIVFHALDQEHINEIVTLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK ++++ +TE ++ + +EGY+P+YGARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLKEQEVDFILTESAKKFLAKEGYDPAYGARPLRRAIQKHIEDRLSEELLKGNISK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GD++ +D + +G +TV
Sbjct: 790 GDTLTID-EKEGELTV 804
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVEALIGRGQE 73
>gi|225175258|ref|ZP_03729254.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225169434|gb|EEG78232.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 818
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/734 (59%), Positives = 574/734 (78%), Gaps = 11/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI LA EE + LGHNY+G+EHLLLGL+REGEG+AA+VL N+G D + R V+
Sbjct: 83 YTPRAKKVIELAIEEGQNLGHNYVGTEHLLLGLIREGEGIAAQVLTNMGVDLTRARKSVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G+ E + G S PT++++G +LTKLA++ KLDPV+GR +IERV+Q+L
Sbjct: 143 ALLGDEDEPLPEEPGKAPSST--PTVDQFGRDLTKLAKDNKLDPVIGRDIEIERVIQVLS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQRI G VP+ + K+V TL++ +VAGTKYRGEF
Sbjct: 201 RRTKNNPCLIGEPGVGKTAIAEGLAQRIIEGKVPENLRDKRVATLELAAVVAGTKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERL+KLMEE+ + +I+FIDE+HTLIGAGAAEGAIDA+NILKP+LARGELQ IGATTL
Sbjct: 261 EERLRKLMEELHAAGNVIVFIDELHTLIGAGAAEGAIDASNILKPALARGELQAIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIE+DPALERRFQP+ V EPS +E+++ILKGLR+RYE HH+++ TDEAL SA QL
Sbjct: 321 DEYRKHIERDPALERRFQPITVGEPSKEESLEILKGLRDRYEAHHRVKITDEALNSAVQL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ +YI+DRFLPDKAIDLIDEA SRVR++ P + +E+E L + EK AVRGQ+FE
Sbjct: 381 ADRYITDRFLPDKAIDLIDEAASRVRMKAYTAPPDLKEMEGRLDTLRNEKESAVRGQEFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A +LRD+E LK ++ +L + ++ +T++ VV+E DI IVSAWTGIPV+++
Sbjct: 441 VAAQLRDKEQQLKEELQSLKKEWEQRKSTDTQS-----VVSE-DIAQIVSAWTGIPVKRL 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLL ME LHKRVIGQDEAVKAISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 495 AAEETERLLNMESILHKRVIGQDEAVKAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIRLDMSE+ME+HT ++L+GSPPGYVGY +GGQLTE VRR+PY
Sbjct: 555 TELARALAESLFGDEDAMIRLDMSEYMEKHTTARLVGSPPGYVGYDDGGQLTEKVRRKPY 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHP+VFN++LQ+LEDGRLTD KGR VDF+NT++IMTSNVG+ ++K
Sbjct: 615 SVILFDEIEKAHPEVFNVLLQVLEDGRLTDGKGRAVDFRNTVIIMTSNVGAGELKKQA-T 673
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF +++ +Y +K V +ELK+ FRPEFLNR+DE+IVF L + + EI ++ML
Sbjct: 674 MGF--RAADREKTYEDMKGKVMDELKRTFRPEFLNRIDEVIVFHPLEEEHLTEIVELMLD 731
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL +I L+V+ + + +EGY+P+YGARPLRR + + +ED ++EKML +
Sbjct: 732 ELARRLGDYEIRLEVSPEAKAFLAKEGYDPTYGARPLRRVLQKRIEDEVSEKMLRGDFTH 791
Query: 815 GDSVIVDVDSDGNV 828
D++ V+V DG V
Sbjct: 792 NDTIQVNVQDDGLV 805
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV++LAQ+EA+R H+++G+EH+L+GL+REGEG+AA+VL +LG ++R
Sbjct: 3 MFGRFTERAQKVLVLAQDEAKRFNHSFVGTEHILMGLVREGEGIAAKVLLSLGMQLDSVR 62
Query: 151 TQVIRMVGESTE-AVGAGVGGGSSGNKMPTLE-EYGTNL 187
+++ +++G+ + ++ GV K+ L E G NL
Sbjct: 63 SEIEKLIGKGDQRSLPQGVNYTPRAKKVIELAIEEGQNL 101
>gi|256752490|ref|ZP_05493347.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748625|gb|EEU61672.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 816
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/734 (60%), Positives = 582/734 (79%), Gaps = 9/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR +Y+G+EH+LLGLLREGEGVAAR+L G D + +R +++
Sbjct: 81 YTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGEGVAARILMEQGIDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M+ E A G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMLNEEP-AGGPAKAAKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTL
Sbjct: 260 EDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK++E+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+L
Sbjct: 320 DEYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++E
Sbjct: 380 SHRYIADRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E L+ ++ L K K + + VGP +I +VS WTGIPV+K+
Sbjct: 440 KAAKIRDEEQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AEEESERLLHLEEVLHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 554 TELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K
Sbjct: 614 SVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQS-T 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF E +SY++IK + EL++ FRPEFLNR+DE+IVF QL+K ++++IADIM+K
Sbjct: 673 LGFMPQEKEDKASYDKIKETLMAELRKTFRPEFLNRVDEIIVFHQLSKEDIEKIADIMIK 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ DRLK DI+L T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K
Sbjct: 733 ELNDRLKENDIKLDFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKP 792
Query: 815 GDSVIVDVDSDGNV 828
GD +IV DG +
Sbjct: 793 GDELIVTA-KDGKI 805
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RFTE+A K + LAQEEAR HNY+G+EH+LLGLL+E EG+AARVL+ LG
Sbjct: 2 AMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYETT 61
Query: 150 RTQVIRMVG 158
R +V+ ++G
Sbjct: 62 REKVLSLIG 70
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/736 (59%), Positives = 574/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+E V G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEVVSPNHGNPTNVN-TPTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR +P + ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEASSKVRLRSYTVPPDLKKLESRLDDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + ++ KE + G VT DI +V++WTGIPV K+
Sbjct: 438 KAASLRDTEQKLREELDSTKNEWKE------KQGRTDSEVTPDDIAQVVASWTGIPVVKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+ RLLKME+ LH RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 AEEETQRLLKMEDILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESLFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADTIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF +D YN +K V ELK+ FRPEFLNR+DE+IVF L + + EI +M +
Sbjct: 671 LGFTAAHD-AGKDYNNMKEKVMGELKKSFRPEFLNRIDEIIVFHSLEEQHIAEIVTLMAE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK +++E +T+ + + +EGY+P++GARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLKEQEVEFFLTDSAKAFLAKEGYDPAFGARPLRRAIQKHIEDRLSEELLRGNISK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+ +D + DG + V
Sbjct: 790 GDSLTID-EKDGELIV 804
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLSLAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVESLIGRGQE 73
>gi|260893780|ref|YP_003239877.1| ATPase AAA-2 domain-containing protein [Ammonifex degensii KC4]
gi|260865921|gb|ACX53027.1| ATPase AAA-2 domain protein [Ammonifex degensii KC4]
Length = 812
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/743 (61%), Positives = 591/743 (79%), Gaps = 12/743 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A +V+ LA +EAR+LGHNY+G+EHLLLGL+REGEGVAA+VL GAD +R QV+
Sbjct: 80 LTPRAKRVLELAVDEARQLGHNYVGTEHLLLGLIREGEGVAAQVLTMFGADLDKVRAQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
M+ ST GA G + +K P L+++G +LT+LA E +LDPVVGR+ +IERV+QIL
Sbjct: 140 EML--STGTPGAAQAGPAGRSKTPLLDQFGRDLTRLAREDRLDPVVGREKEIERVIQILS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIG+PGVGKTAI EGLAQRIA G VP+ + K+V+ LD+ +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGDPGVGKTAIVEGLAQRIAKGQVPEVLLNKRVVALDLASVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK+++EIK + +ILFIDE+HT++GAGAAEGAIDAANILKP LARGELQ IGATTL
Sbjct: 258 EERLKKIVDEIKAAGNVILFIDELHTIVGAGAAEGAIDAANILKPVLARGELQTIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIE+DPALERRFQPV V EP+V+ETI ILKGLR+RYE HH++R TDEA+ +AA+L
Sbjct: 318 DEYRKHIERDPALERRFQPVMVGEPTVEETIAILKGLRDRYEAHHRVRITDEAIEAAAKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRLR P + +ELE++L +I KEK AV Q+FE
Sbjct: 378 SHRYITDRFLPDKAIDLIDEAASRVRLRAFTPPPDLKELEQKLEEIRKEKEAAVAAQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +LRD+E +KA+I A +E + + G++ VVT D+ +VS+WTGIPV+++
Sbjct: 438 KAAQLRDQEAKIKAEIEA----AREAWRQKQSDGEL--VVTAEDVAEVVSSWTGIPVKQL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLLK+EE LH+R++GQDEAV A++RA+RRAR GLK+P RPI FIF GPTGVGK
Sbjct: 492 KMEEAERLLKLEEILHQRIVGQDEAVAAVARAVRRARAGLKDPRRPIGVFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELAKALA FG EEAM+R+DMSE+MERHTVS+L+G+PPGYVGY EGGQLTEAVRRRPY
Sbjct: 552 TELAKALAEALFGDEEAMVRIDMSEYMERHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
TVVL DEIEKAHPDVFN++LQI+EDGRLTD+KGRTVDFKNT++IMTSN+G+ +++
Sbjct: 612 TVVLLDEIEKAHPDVFNILLQIMEDGRLTDAKGRTVDFKNTVIIMTSNIGARFLKRES-P 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + DEK +++ +K + +EL++ FRPEFLNR+DE+IVF LT ++ I D+MLK
Sbjct: 671 LGFRAE-DEK-AAFESMKEKILKELERTFRPEFLNRVDEIIVFHPLTPEHIRAIVDLMLK 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+V RLK + +E++ ++ +E + ++GY+ ++GARPLRR I RL+ED ++E+ML +
Sbjct: 729 DVAKRLKEQGVEVEFSDALKELLAQKGYDENFGARPLRRTIQRLVEDRLSEEMLKGTFAK 788
Query: 815 GDSVIVDVDSDGNVTVLNGSSGA 837
GD V+VD + +G V V GA
Sbjct: 789 GDKVLVDAE-NGEVVVKREPVGA 810
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT +A KV++LAQEEARR+ + ++G+EH+LLGLLREGEGVAA+VL+NLG +R
Sbjct: 1 MFGRFTRRAQKVLLLAQEEARRMNYPFVGTEHILLGLLREGEGVAAKVLQNLGISADAVR 60
Query: 151 TQVIRMVGESTEAV 164
+V ++V E V
Sbjct: 61 EKVEQIVERGEEPV 74
>gi|121535702|ref|ZP_01667506.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
gi|121305733|gb|EAX46671.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
Length = 814
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/747 (60%), Positives = 587/747 (78%), Gaps = 17/747 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ LA +EA LGHNYIG+EH+LLGL+REGEGVAA+VL +LGA+ + +R +VI
Sbjct: 79 YTPRAKRVLELAVQEAAALGHNYIGTEHILLGLIREGEGVAAQVLSSLGANINVVRQRVI 138
Query: 155 R------MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
M G GA + GG++ P L EYG +L KLA+EGK+DPVVGR+ +IER
Sbjct: 139 ELLGGFAMSGPMPTGHGAAMAGGNT--HTPLLNEYGRDLNKLAQEGKIDPVVGRETEIER 196
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTAIAEGLAQRI G VP+T+ GK+V++L+MG LVAG+
Sbjct: 197 VIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVEGKVPETLRGKRVVSLNMGSLVAGS 256
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERLKK+M+EI+Q+ +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQ
Sbjct: 257 KYRGEFEERLKKIMDEIRQAGNVILFIDEIHTLIGAGAAEGAIDAANILKPALARGELQT 316
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEY+KHIEKD ALERRFQP+ V EPSV+E I+IL+GLR+RYE HK + TDEA+
Sbjct: 317 IGATTLDEYKKHIEKDAALERRFQPIMVGEPSVEEAIEILRGLRDRYEAFHKAQITDEAI 376
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+A +LS++YI+DRFLPDKAIDL+DEA SRVRLR LP + ++LEK+L ++ EK A+
Sbjct: 377 VAAVKLSHRYITDRFLPDKAIDLMDEAASRVRLRAVSLPPDVKDLEKKLEKLLAEKQAAI 436
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
Q+FE+A ++ E ++ ++ ++ K + G +VTE DI IV+ WTG
Sbjct: 437 TAQEFEEAARIKREEDQIRQEL-------EKRQKDWKQRGSGQVIVTEEDIAEIVAKWTG 489
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV+K++ +ES+RLLK+EE LH+RVIGQD+AVKA++RAIRRAR GLK+P RPI SF+F G
Sbjct: 490 IPVKKLAEEESERLLKLEEILHQRVIGQDDAVKAVARAIRRARAGLKDPKRPIGSFLFLG 549
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELA+ALA FG EEAMIR DMSE+ME+HTVS+LIG+PPGYVGY EGGQLT+A
Sbjct: 550 PTGVGKTELARALAEALFGKEEAMIRFDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTDA 609
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR PY+V+L DEIEKAH DVFN++LQ+LEDGRLTD +GRTVDF+NT++IMTSNVG+S +
Sbjct: 610 VRRHPYSVILLDEIEKAHYDVFNILLQVLEDGRLTDGQGRTVDFRNTVIIMTSNVGASHL 669
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF D ++ ++ K+ V EE+K+ FRPEF+NR+DE+IVF LT ++K+I
Sbjct: 670 RKDTAALGFLADKEQDNAQAA--KTRVMEEVKRTFRPEFINRIDEIIVFNSLTDDDLKQI 727
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
++ML V RL D++L+VT+R + +++EG + YGARPLRRAI +++ED +AE ML
Sbjct: 728 VELMLANVAKRLADTDLKLEVTDRAKAELIKEGRDYVYGARPLRRAIQKMVEDEIAELML 787
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSS 835
R+I GD+V+VD D +G +T +S
Sbjct: 788 RRDITSGDTVVVDADENGKLTFTKKNS 814
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 51/68 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M +RFTE+A KV+ LA +EA RLGHNYIG+EHLLLGL+ EGEGVAAR L +L +R
Sbjct: 1 MLDRFTERARKVLALAHQEAMRLGHNYIGTEHLLLGLIHEGEGVAARALASLNISLQTVR 60
Query: 151 TQVIRMVG 158
QV M+G
Sbjct: 61 AQVEAMIG 68
>gi|386712438|ref|YP_006178760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
gi|384071993|emb|CCG43483.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
Length = 819
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/741 (58%), Positives = 575/741 (77%), Gaps = 14/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGN---KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++G EST GG PTL+ +LT +A+EG +DPV+GR +IERV
Sbjct: 140 QLLGNNESTGGQNRRGGGSGGQAASANTPTLDSLARDLTTIAKEGNIDPVIGRGKEIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP L+GEPGVGKTAIAEGLAQ+I + ++P+ + K+V+TLDMG +VAGTK
Sbjct: 200 IQVLSRRTKNNPVLVGEPGVGKTAIAEGLAQQIINNEIPEILRDKRVMTLDMGTVVAGTK 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFE+RLKK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCI
Sbjct: 260 YRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATT+DEYRK+IEKD ALERRFQP++V EP++DE++QIL+GLR+RYE HH++ D+++
Sbjct: 320 GATTIDEYRKYIEKDAALERRFQPIQVDEPTLDESVQILQGLRDRYEAHHRVTIPDDSIE 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SA + S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE++L ++ KEK+ AV+
Sbjct: 380 SAVRFSDRYITDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQKLEEVRKEKDAAVQ 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q+FEKA LRD E L+ ++ D+ KE + G VT DI +VS WTG+
Sbjct: 440 SQEFEKAASLRDSEQRLRDELEETKDEWKE------KQGQEDSEVTVEDIASVVSTWTGV 493
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ DES+RLL++E+TLH RVIGQDEAVK+IS+AIRRAR GLK+P RPI SFIF GP
Sbjct: 494 PVSKMTKDESERLLQLEDTLHNRVIGQDEAVKSISKAIRRARAGLKDPKRPIGSFIFLGP 553
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE V
Sbjct: 554 TGVGKTELARALAESMFGEEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKV 613
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
R +PY+VVL DE+EKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NT+LIMTSNVG+ +
Sbjct: 614 RNKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNVGAQEL- 672
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K + +GF + D+ + SY +KS VT+ELK+ FRPEFLNR+DE IVF L + +K+I
Sbjct: 673 KSNKYVGFSM--DDSNQSYKDMKSKVTDELKKAFRPEFLNRIDETIVFHSLERKHMKDIV 730
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+M +E+ RL+ ++I ++++ E + E G++P YGARPLRR+I + +ED ++E++L
Sbjct: 731 TLMAEELRKRLQEQEINFTLSDKAIEHIAETGFDPEYGARPLRRSIQKNVEDLLSEELLK 790
Query: 810 REIKEGDSVIVDVDSDGNVTV 830
I +G SV +D++ + V
Sbjct: 791 ENIAKGQSVKIDLNDNNEFVV 811
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 54/68 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+ EGEG+AA+ L LG + S I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLVSEGEGIAAKSLTALGLEASKIQ 61
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 62 QEVEKLIG 69
>gi|125974293|ref|YP_001038203.1| ATPase AAA-2 [Clostridium thermocellum ATCC 27405]
gi|256003489|ref|ZP_05428479.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281418347|ref|ZP_06249367.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|385779762|ref|YP_005688927.1| ATPase [Clostridium thermocellum DSM 1313]
gi|419722358|ref|ZP_14249502.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
gi|419725938|ref|ZP_14252972.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|125714518|gb|ABN53010.1| ATPase AAA-2 domain protein [Clostridium thermocellum ATCC 27405]
gi|255992513|gb|EEU02605.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281409749|gb|EFB40007.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|316941442|gb|ADU75476.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 1313]
gi|380770714|gb|EIC04600.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|380781543|gb|EIC11197.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
Length = 818
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/740 (58%), Positives = 575/740 (77%), Gaps = 7/740 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ L+ EARR+GHNYIG+EHLLLG+++EGE VA R+L++LG + + +++
Sbjct: 79 FTPRTKRVLELSYREARRMGHNYIGTEHLLLGIMKEGESVAVRILKDLGVEHQKLVQEIM 138
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
M+ E G SS + PTL ++G +LT++A E K DPV+GR +IERV+QIL
Sbjct: 139 NMLSEEAPNSTGVPKGHSSYSNTPTLNQFGRDLTEMAREAKFDPVIGRDKEIERVIQILS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ ++ K+V+TLD+ +VAG KYRGEF
Sbjct: 199 RRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILKDKRVVTLDLSSMVAGAKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK ++EI+++ +ILFIDE+HT+IGAGAAEGAIDA+NILKPSLARGE+Q IGATT+
Sbjct: 259 EERLKKALDEIRRAGNVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEIQVIGATTI 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQP+ V EP+ +E I+IL+GLR++YE HH ++ TDEALV+A +
Sbjct: 319 DEYRKHIEKDAALERRFQPILVGEPTKEEAIEILRGLRDKYEAHHSVKITDEALVAAVNM 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA SRVRL+ P + + LE+++ ++ KEK +A+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASRVRLKSFTAPPDLKHLEEKVERLRKEKEDAIVCQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD E LK ++ D ++ ++ T VV+E DI IVS WTGIPV+++
Sbjct: 439 KAARIRDEEQRLKNELEKAKDSWRQKNQTTTN------VVSEDDIAVIVSDWTGIPVKRL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RL+KME+ LHKRVIGQDEAVKAIS+AIRR RVGLK+P RP+ SFIF GPTGVGK
Sbjct: 493 AEEESERLMKMEDILHKRVIGQDEAVKAISKAIRRGRVGLKDPKRPVGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E AMIR+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELSKALAEALFGEENAMIRIDMSEYMEKHSVSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPD+FN++LQILEDGRLTDS+GR VDF+NT++IMTSN+G+ +I + ++
Sbjct: 613 SVVLFDEIEKAHPDIFNILLQILEDGRLTDSQGRVVDFRNTVIIMTSNIGARLITE-PKQ 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF +K SY +K+ V ELK+ FRPEFLNR+DE+IVF L + +K+I +M+
Sbjct: 672 LGFAPVAQDKKKSYEDMKNNVMNELKKNFRPEFLNRIDEIIVFHPLEEEHLKQIVGLMID 731
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ +RLK IE++V++ + + ++G++P YGARPLRRA+ ++ED +AE+ML +K
Sbjct: 732 NLAERLKQNSIEIEVSDEAKALLAKKGFDPVYGARPLRRAVQSMVEDRLAEEMLEGRVKS 791
Query: 815 GDSVIVDVDSDGNVTVLNGS 834
GD V VDV D V V + S
Sbjct: 792 GDKVFVDVKDDELVFVKDKS 811
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFTEKA K I ++Q A LGHNY+G+EHLLLGL++EG GVAARVL++ G +
Sbjct: 1 MYGRFTEKAQKAINISQNMAIELGHNYVGTEHLLLGLVKEGSGVAARVLQSQGVTEEKVI 60
Query: 151 TQVIRMVG 158
++ ++G
Sbjct: 61 REIEELIG 68
>gi|226309775|ref|YP_002769669.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
gi|226092723|dbj|BAH41165.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
Length = 815
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/736 (58%), Positives = 580/736 (78%), Gaps = 10/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEG+AAR++ NLG + R QV+
Sbjct: 82 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGVSLNKARQQVL 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S GG+ PTL+ +LT +A +G LDPV+GRQ +IERV+Q+L
Sbjct: 142 QLLGSSEMMASHQPSGGNPAANTPTLDGLARDLTAIARDGGLDPVIGRQKEIERVIQVLS 201
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 202 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEF 261
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTL
Sbjct: 262 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTL 321
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 322 DEYRKYIEKDAALERRFQPIQVDEPTAEDAIRILHGLRDRYEAHHRVKITDEAIEQAVKL 381
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI++RFLPDKAIDL+DEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE
Sbjct: 382 SDRYITERFLPDKAIDLVDEAASKVRLQSFTVPPNLKELEGRLEEVRKEKDAAVQSQEFE 441
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A LRD+E L+ ++ DK K+ K G + VT DI +V++WTGIPV K+
Sbjct: 442 EAAALRDQEQKLREEL----DKTKKDWKERQ--GQLNMEVTPEDIAQVVASWTGIPVLKL 495
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLLKMEE LH RVIGQDEAVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 496 KEEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 555
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+AMIR+DMSE+ME+H+ ++L+G+PPGYVG+ EGGQLTE VRR+PY
Sbjct: 556 TELARAVAETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKPY 615
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+S+I+K
Sbjct: 616 SVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGASMIKK-NTT 674
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + E+ Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M
Sbjct: 675 LGFTTNDSER--KYQDMKDKVMDELKKSFRPEFLNRIDEVIVFHSLEQEHIEQIVTLMTD 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK +DI+ Q+TE ++ + +EG++P+YGARPLRRAI R +ED+++E++L I +
Sbjct: 733 ELRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGARPLRRAIQRHIEDNLSEELLKGTISK 792
Query: 815 GDSVIVDVDSDGNVTV 830
GD+V ++ + +G + V
Sbjct: 793 GDTVNIEAE-EGKLVV 807
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LA EEA RLGH IG+EH+LLGL+REGEG+AA+ L++LG I+
Sbjct: 1 MFGRFTERAQKVLALALEEAVRLGHKDIGTEHVLLGLIREGEGIAAKALQSLGLGLDKIQ 60
Query: 151 TQVIRMVGESTEAVGA 166
++V ++G TE G+
Sbjct: 61 SEVESLIGRGTEQSGS 76
>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
Length = 814
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/736 (60%), Positives = 581/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGHNY+G+EH+LLGL+REGEGVAARVL NLG R QVI
Sbjct: 80 YTPRAKKVIELSIDEARKLGHNYVGTEHILLGLIREGEGVAARVLNNLGVSLPKARQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G ++ S N PTL+ +LT++A +GKLDPV+GR +IERV+Q+L
Sbjct: 140 QLLG--GDSAETNQENQQSAN-TPTLDSLARDLTQMARDGKLDPVIGRNKEIERVIQVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+ LDMG +VAGTKYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVANEIPETLRNKRVMVLDMGTVVAGTKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 257 EDRLKKIMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQP+ V +P+ +E IQIL GLR+RYE HH+++ +DEAL +A +L
Sbjct: 317 DEYRKHIEKDAALERRFQPIMVDQPTPEEAIQILHGLRDRYEAHHRVKISDEALEAAVRL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDR+LPDKAIDLIDEA SRVRLR P +ELE++L ++ KEK AV+ Q+FE
Sbjct: 377 SDRYISDRYLPDKAIDLIDEAASRVRLRTHTAPPNLKELEEQLEEVRKEKEAAVQSQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E L+ ++ +K K+ + + + D VV E DI IVS+WTGIPV+K+
Sbjct: 437 KAAALRDKEQRLREEL----EKRKQEWQQKQASKD--SVVIEEDIAEIVSSWTGIPVKKL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL MEE LHKRVIGQDEAV+A+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 AEEESERLLHMEEILHKRVIGQDEAVEAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A++R+DMSE+MERHT S+LIG+PPGYVGY EGGQLTE +RR+PY
Sbjct: 551 TELARALAEAMFGDENAVVRIDMSEYMERHTTSRLIGAPPGYVGYEEGGQLTEKIRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+L+DGRLTD KGRTVDF+NT++IMTSNVG+ I +GG
Sbjct: 611 SVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNVGAQSIRRGG-P 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF +E+D +Y +K+ V EELK+ FRPEFLNR+DE+IVF LT+ ++ I D+M+
Sbjct: 670 LGFAARSEEED-AYKDMKNKVMEELKRQFRPEFLNRIDEVIVFHALTQQDIMRIVDLMVD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL+ DI+ ++T+ + + +EG++P+YGARPL+RAI R +ED ++E +L I +
Sbjct: 729 DLRKRLRDHDIDFELTDDAKAFLAKEGFDPTYGARPLKRAIQRHIEDRLSEALLNGTIVK 788
Query: 815 GDSVIVDVDSDGNVTV 830
GD V +D DG +TV
Sbjct: 789 GDRVRIDF-QDGALTV 803
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 53/68 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LA EEA RLGH+ IG+EH+LLGL+REG+G+AA+ L +LG I+
Sbjct: 2 MFGRFTERAQKVLALAHEEASRLGHSGIGTEHILLGLVREGDGIAAKALMSLGLSSEKIQ 61
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 62 REVEKIIG 69
>gi|399055773|ref|ZP_10743423.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|433543324|ref|ZP_20499734.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
gi|398046636|gb|EJL39230.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|432185453|gb|ELK42944.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
Length = 816
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/729 (58%), Positives = 574/729 (78%), Gaps = 9/729 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEG+AAR++ NLG + R QV+
Sbjct: 83 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGVSLNKARQQVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S GG+ PTL+ +LT +A +G LDPV+GRQ +IERV+Q+L
Sbjct: 143 QLLGSSEMMASHQPSGGNPAANTPTLDGLARDLTAIARDGGLDPVIGRQKEIERVIQVLS 202
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 203 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEF 262
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTL
Sbjct: 263 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTL 322
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 323 DEYRKYIEKDAALERRFQPIQVDEPTAEDAIRILHGLRDRYEAHHRVKITDEAIEQAVKL 382
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDL+DEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE
Sbjct: 383 SDRYITDRFLPDKAIDLVDEAASKVRLQSFTVPPNLKELEGRLEEVRKEKDAAVQSQEFE 442
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A LRD+E L+ ++ DK K+ K G + VT DI +V++WTGIPV K+
Sbjct: 443 EAAALRDQEQKLREEL----DKTKKDWKERQ--GQLNMEVTPEDIATVVASWTGIPVLKL 496
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLLKMEE LH RVIGQDEAVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 497 KEEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 556
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+AMIR+DMSE+ME+H+ ++L+G+PPGYVG+ EGGQLTE VRR+PY
Sbjct: 557 TELARAVAETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKPY 616
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+S+I+K
Sbjct: 617 SVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGASMIKK-NTT 675
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + EK Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M
Sbjct: 676 LGFTTNDTEK--KYQDMKDKVMDELKKSFRPEFLNRIDEVIVFHSLEQEHIEQIVSLMTD 733
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK + I+ Q+TE ++ + +EG++P+YGARPLRRAI R +ED ++E++L I +
Sbjct: 734 ELRKRLKEQSIDFQLTEDAKKLLAKEGFDPAYGARPLRRAIQRHIEDKLSEELLKGNISK 793
Query: 815 GDSVIVDVD 823
GD+V ++ +
Sbjct: 794 GDTVNIEAE 802
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LA EEA RLGH IG+EH+LLGL+REGEG+AA+ L++LG I+
Sbjct: 2 MFGRFTERAQKVLALALEEAVRLGHKDIGTEHVLLGLIREGEGIAAKALQSLGLGLDKIQ 61
Query: 151 TQVIRMVGESTEAVGA 166
++V ++G TE G+
Sbjct: 62 SEVESLIGRGTEQSGS 77
>gi|167036769|ref|YP_001664347.1| ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167039489|ref|YP_001662474.1| ATPase [Thermoanaerobacter sp. X514]
gi|307725185|ref|YP_003904936.1| ATPase [Thermoanaerobacter sp. X513]
gi|320115191|ref|YP_004185350.1| ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166853729|gb|ABY92138.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X514]
gi|166855603|gb|ABY94011.1| ATPase AAA-2 domain protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|307582246|gb|ADN55645.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X513]
gi|319928282|gb|ADV78967.1| ATPase AAA-2 domain protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 816
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/734 (60%), Positives = 581/734 (79%), Gaps = 9/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR +Y+G+EH+LLGLLREGEGVA R+L G D + +R +++
Sbjct: 81 YTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGEGVAVRILMEQGIDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M+ E A G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMLNEEP-AGGPAKAAKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTL
Sbjct: 260 EDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK++E+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+L
Sbjct: 320 DEYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++E
Sbjct: 380 SHRYIADRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E L+ ++ L K K + + VGP +I +VS WTGIPV+K+
Sbjct: 440 KAAKIRDEEQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AEEESERLLHLEEVLHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 554 TELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K
Sbjct: 614 SVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQS-T 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF E +SY++IK + EL++ FRPEFLNR+DE+IVF QL+K ++++IADIM+K
Sbjct: 673 LGFMPQEKEDKASYDKIKETLMAELRKTFRPEFLNRVDEIIVFHQLSKEDIEKIADIMIK 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ DRLK DI+L T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K
Sbjct: 733 ELNDRLKENDIKLDFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKP 792
Query: 815 GDSVIVDVDSDGNV 828
GD +IV DG +
Sbjct: 793 GDELIVTA-KDGKI 805
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RFTE+A K + LAQEEAR HNY+G+EH+LLGLL+E EG+AARVL+ LG
Sbjct: 2 AMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYETT 61
Query: 150 RTQVIRMVG 158
R +V+ ++G
Sbjct: 62 REKVLSLIG 70
>gi|317123126|ref|YP_004103129.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315593106|gb|ADU52402.1| ATPase AAA-2 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 839
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/736 (61%), Positives = 581/736 (78%), Gaps = 10/736 (1%)
Query: 95 FTEKAIKVIM-LAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KV+M LA EEAR LGHNY+G+EH+LLGL+REGEGVAA+VLEN+GAD +R V
Sbjct: 80 YTPRAKKVVMELAPEEARLLGHNYVGTEHILLGLIREGEGVAAKVLENMGADLDRVRQTV 139
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
I+++G T A + P L+ +G +LT++AEEGKLDPV+GR +IERV+QIL
Sbjct: 140 IKLLG-GTAAPAPAARQRRQKSTTPVLDNFGRDLTQMAEEGKLDPVIGRDKEIERVIQIL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAI EGLAQRIA G VP+ ++ ++V++LD+G LVAG+KYRGE
Sbjct: 199 SRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGKVPEILKDRRVVSLDLGALVAGSKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+M+EI+++ IILFIDE+HT+IGAGAAEGAIDAA+ILKP+LARGELQ IGATT
Sbjct: 259 FEERLKKVMDEIRRAGNIILFIDEMHTIIGAGAAEGAIDAASILKPALARGELQTIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRKH+EKD ALERRFQP+ V EPSV++ IQIL+GLR+RYE HH++ TD+A+V+A +
Sbjct: 319 LDEYRKHVEKDAALERRFQPIMVEEPSVEDAIQILRGLRDRYEAHHRVEITDDAIVAAVK 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
L+ +YISDRFLPDKAIDLIDEA SR RL+ P E +E+E+ L +I KEK AV+ Q+F
Sbjct: 379 LADRYISDRFLPDKAIDLIDEAASRARLQAFVAPPELKEIEQRLEEIRKEKEAAVQSQEF 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E L ++ ++ ++ E VVT DI IVS WTGIPV +
Sbjct: 439 EKAANLRDQEQKLVEELERKKNEWQQQQLNEK------IVVTADDIAQIVSNWTGIPVRR 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
+ ES+RLLK+EE LH+R++GQD+AVKA++RAIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 493 LEQAESERLLKLEEILHERIVGQDDAVKAVARAIRRARAGLKDPRRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELAKALA FG E+AMI LDMSE+MERHTVS+L+GSPPGYVGY EGGQLTE VRRRP
Sbjct: 553 KTELAKALAEALFGDEDAMIVLDMSEYMERHTVSRLVGSPPGYVGYEEGGQLTEQVRRRP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VV+FDEIEKAHP+VFN++LQILE+GRLT++KGRTVDF+NT++IMTSNVG+ +I +
Sbjct: 613 YSVVVFDEIEKAHPEVFNVLLQILEEGRLTEAKGRTVDFRNTVIIMTSNVGADLIRRQT- 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
R+GF D++ Y +K + +E+K+ FRPEFLNR+DE+IVF LT+ + I D+ML
Sbjct: 672 RVGFQAG-DQEAPDYEDMKRKIMDEVKRTFRPEFLNRIDELIVFHALTEEHLMRIVDLML 730
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V RLK +EL+VTE + ++V+EG + YGARPLRR I RL+ED ++E+MLA K
Sbjct: 731 KRVAQRLKEHGLELEVTEAAKRKLVKEGADVVYGARPLRRTITRLVEDPLSEEMLAGRFK 790
Query: 814 EGDSVIVDVDSDGNVT 829
EGD+V+VDVD +G +
Sbjct: 791 EGDTVVVDVDEEGRIV 806
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 60/79 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF R++E+A +VI+LAQEEARRL +NY+G+EHLLLGL+REG G+AA+ L++LG + +R
Sbjct: 1 MFGRYSERAQRVILLAQEEARRLNYNYVGTEHLLLGLIREGTGIAAKALQSLGINLEQVR 60
Query: 151 TQVIRMVGESTEAVGAGVG 169
+V +++G + +G
Sbjct: 61 AEVEKIIGRGNGPIQGEIG 79
>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
Length = 816
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/729 (58%), Positives = 576/729 (79%), Gaps = 9/729 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEG+AAR++ NLG + R QV+
Sbjct: 83 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGVSLNKARQQVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S GG+ PTL+ +LT +A +G LDPV+GRQ +IERV+Q+L
Sbjct: 143 QLLGSSEMMASHQPSGGNPAANTPTLDGLARDLTAIARDGGLDPVIGRQKEIERVIQVLS 202
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 203 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEF 262
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTL
Sbjct: 263 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTL 322
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 323 DEYRKYIEKDAALERRFQPIQVDEPTAEDAIRILHGLRDRYEAHHRVKITDEAIEQAVKL 382
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI++RFLPDKAIDL+DEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE
Sbjct: 383 SDRYITERFLPDKAIDLVDEAASKVRLQSFTVPPNLKELEGRLEEVRKEKDAAVQSQEFE 442
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A LRD+E L+ ++ DK K+ K G + VT DI +V++WTGIPV K+
Sbjct: 443 EAAALRDQEQKLREEL----DKTKKDWKERQ--GQLNMEVTPEDIAQVVASWTGIPVLKL 496
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLLKMEE LH RVIGQDEAVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 497 KEEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 556
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+AMIR+DMSE+ME+H+ ++L+G+PPGYVG+ EGGQLTE VRR+PY
Sbjct: 557 TELARAVAETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKPY 616
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+++I+K
Sbjct: 617 SVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGANMIKK-NTT 675
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + E+ Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M
Sbjct: 676 LGFTTNDSER--KYQDMKDKVMDELKKSFRPEFLNRIDEVIVFHSLEQEHIEQIVSLMTD 733
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK +DI+ Q+TE ++ + +EG++P+YGARPLRRAI R +ED+++E++L I +
Sbjct: 734 ELRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGARPLRRAIQRHIEDNLSEELLKGTISK 793
Query: 815 GDSVIVDVD 823
GD+V ++ +
Sbjct: 794 GDTVNIEAE 802
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LA EEA RLGH IG+EH+LLGL+REGEG+AA+ L++LG I+
Sbjct: 2 MFGRFTERAQKVLALALEEAVRLGHKDIGTEHVLLGLIREGEGIAAKALQSLGLGLDKIQ 61
Query: 151 TQVIRMVGESTEAVGA 166
++V ++G TE G+
Sbjct: 62 SEVESLIGRGTEQSGS 77
>gi|374709167|ref|ZP_09713601.1| class III stress response-related ATPase [Sporolactobacillus
inulinus CASD]
Length = 816
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/736 (58%), Positives = 570/736 (77%), Gaps = 10/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +VI L+ +EAR++GH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKRVIELSMDEARKIGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G G+ G +S PTL+ +LT +A +G LDPV+GR +IERV+++L
Sbjct: 140 QLLGSHEANSGSAQGRNASHASTPTLDSLARDLTAMASDGSLDPVIGRSKEIERVIEVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+AEGLAQ I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAVAEGLAQEIVNNEVPEILREKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+KV EP+ ++++ ILKGLR+RYE HH+++ TDEA+ A +L
Sbjct: 320 DEYRKYIEKDAALERRFQPIKVKEPTKEQSVLILKGLRDRYEAHHRVKITDEAIKEAVRL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRLR P +E+E+ L + KEK+ AV+ Q+FE
Sbjct: 380 SDRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKEMEQHLESVKKEKDSAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E LK Q+ + KE + G V D+ +VS WTGIPV K+
Sbjct: 440 KAASLRDQEQKLKEQVDRCKKEWKE------KQGKENTQVLPDDVALVVSNWTGIPVVKM 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
ES+RLL ME LH+RVIGQ+EA+ AIS AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 EQKESERLLNMESILHERVIGQNEAINAISHAIRRARAGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG EE++IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VR++PY
Sbjct: 554 TELARAVAETLFGDEESIIRIDMSEYMEKHTTSRLVGSPPGYVGHDEGGQLTEKVRQKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT +IMTSNVG+S ++K +
Sbjct: 614 SVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSNVGASQLKK-NKY 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + DE+ Y +K V ELK+ FRPEFLNR+DE+IVF +L K E+ EI ++
Sbjct: 673 VGFSV--DEEGHEYKEMKERVMGELKRAFRPEFLNRIDEIIVFHELKKEELMEIVTLLAD 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RL + I++ +T+ + ++VEEGY+P YGARPLRRA+ R +ED ++E++L IK+
Sbjct: 731 QLRNRLSNQGIQIDLTDAAKRQIVEEGYDPEYGARPLRRALQRKVEDKLSEELLKGNIKK 790
Query: 815 GDSVIVDVDSDGNVTV 830
G +V++D DG +V
Sbjct: 791 GTNVVIDY-QDGEYSV 805
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RLGHN IG+EH+LLGL+REG+G+AA+ L L DP I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAMRLGHNNIGTEHILLGLVREGDGIAAKALLALNLDPEKIQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G T+ V
Sbjct: 62 KEVEALIGRGTDEV 75
>gi|443315779|ref|ZP_21045253.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784616|gb|ELR94482.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 824
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/741 (60%), Positives = 576/741 (77%), Gaps = 13/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT K +V A +EAR+L +YIG EHLLL L + E VA RV+ENLG P+ +RT++I
Sbjct: 80 FTPKVKQVFEQAFQEARKLDADYIGPEHLLLSLTQSDESVAYRVIENLGVPPTKLRTRLI 139
Query: 155 RMVGESTEAVGAGVG----GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+ +GE AV AGV + L E+ T++T LA GKLDPV+GR +IERVV
Sbjct: 140 QELGE-VAAVPAGVDRFERQDGKKKRSSVLAEFSTDITALAAAGKLDPVIGRALEIERVV 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QILGRRTKNNP L+GEPGVGKTAIAEGLAQRI + DVP + GK++++LDMGLL++GT++
Sbjct: 199 QILGRRTKNNPVLVGEPGVGKTAIAEGLAQRIVNQDVPPELFGKRILSLDMGLLLSGTRF 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEER+ ++++E+++ IIL IDE+HTL+GAG+ EG DAAN+LKP+LARGELQCIG
Sbjct: 259 RGDFEERITQVIKEVREDRSIILAIDELHTLVGAGSLEGGTDAANLLKPALARGELQCIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDE+RK+IE+D ALERRFQ V++ PSV ETI+IL+GLR RYE H++ D+AL +
Sbjct: 319 ATTLDEFRKYIERDAALERRFQSVRINPPSVTETIEILQGLRSRYEQFHQIVLEDDALTA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AAQLS +YISDR LPDKAIDLIDEAGSRV+LRH QL +REL++ RQ+ ++ AV
Sbjct: 379 AAQLSDRYISDRHLPDKAIDLIDEAGSRVKLRH-QLNYPSRELKQAFRQVNQDLEGAVLR 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
QDF AG L+++ L +I+A A+++ P+V E DI IV++WTG+P
Sbjct: 438 QDFPAAGTLQEQRQQLLEEITA------GQGDADSKHARRLPLVGEDDIAEIVASWTGVP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V +++ E+ +LL +E+TLH+RVIGQ+EAV A+SRAIRR+RV L +P+RPIAS IFSGPT
Sbjct: 492 VTRMTESEAAQLLHLEDTLHERVIGQNEAVMAVSRAIRRSRVNLSSPDRPIASLIFSGPT 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL KALA FGSEEAMIRLDMSEFME HTV+KL+GSPPG+VGY EGGQLTEAVR
Sbjct: 552 GVGKTELTKALAMALFGSEEAMIRLDMSEFMEPHTVAKLLGSPPGFVGYEEGGQLTEAVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+PY VVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTV FKNTL+IMTSN+GS VIEK
Sbjct: 612 RKPYAVVLMDEIEKAHPDVFNILLQLLEDGRLTDAKGRTVSFKNTLIIMTSNIGSRVIEK 671
Query: 691 GGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
GG +GFD + D S Y I++LV EE+KQ+FRPE LNRLDE+IVFRQLT+ EV E+A
Sbjct: 672 GGGGLGFDTSENDAATSQYQNIRNLVQEEMKQFFRPELLNRLDEIIVFRQLTRSEVMEVA 731
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D++L +V RL + I++ +TE F+ER+++EGY+ YGARP+RRAI RL+ED +AE +L
Sbjct: 732 DLLLVQVNQRLAERQIQVSLTEAFKERLIQEGYDIRYGARPMRRAISRLVEDGLAEAILR 791
Query: 810 REIKEGDSVIVDVDSDGNVTV 830
+I+ GD+V +DVD++G V V
Sbjct: 792 SDIQPGDTVTLDVDANGEVQV 812
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT AI VIM AQEEARRL HN++G+E LLLG+L++G AA VL +LG + R
Sbjct: 1 MFEHFTNTAIAVIMKAQEEARRLQHNFVGTEQLLLGILKQGNSQAASVLADLGITLESAR 60
Query: 151 TQVIRMVG 158
+V ++G
Sbjct: 61 QEVEAIIG 68
>gi|317126827|ref|YP_004093109.1| ATPase AAA [Bacillus cellulosilyticus DSM 2522]
gi|315471775|gb|ADU28378.1| ATPase AAA-2 domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 816
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/738 (58%), Positives = 570/738 (77%), Gaps = 12/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL N+G + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNVGVSLNKARQQVL 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++G EST G G S PTL+ +LT +A+E ++DPV+GR +IERV+Q+
Sbjct: 140 QLLGSNESTNNQQQGASGAGSNVNTPTLDSLARDLTAIAKEEQIDPVIGRAKEIERVIQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRNKRVMTLDMGTVVAGTKYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFE+RLKK+MEEI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGAT
Sbjct: 260 EFEDRLKKVMEEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK+IEKD ALERRFQP++V EP+ DE+IQILKGLR+RYE HH++ TD+A+ +A
Sbjct: 320 TLDEYRKYIEKDAALERRFQPIQVDEPTNDESIQILKGLRDRYEAHHRVEITDDAIEAAV 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YISDRFLPDKAIDLIDEA S+VRLR P +E+E++L + KEK+ AV+ Q+
Sbjct: 380 KLSDRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKEMEQKLEETRKEKDAAVQSQE 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA LRD E ++ ++ + + KE + G VT DI +VS+WTGIPV
Sbjct: 440 FEKAASLRDNEQRVREELETMKKEWKE------KQGQENSEVTTEDIALVVSSWTGIPVS 493
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +E++RLLKMEE LH RVIGQ+EAV A+S+A+RRAR GLK+P RPI SFIF GPTGV
Sbjct: 494 KLAEEETERLLKMEEILHNRVIGQEEAVTAVSKAVRRARAGLKDPKRPIGSFIFLGPTGV 553
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE VRR+
Sbjct: 554 GKTELARAVAESLFGDEDAIIRIDMSEYMEKHNTSRLVGSPPGYVGHEEGGQLTEKVRRK 613
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+V+L DEIEKAHP+VFN++LQ+LEDG LTDSKGR VDF+NT +IMTSNVG+S + +
Sbjct: 614 PYSVILLDEIEKAHPEVFNILLQVLEDGFLTDSKGRRVDFRNTAIIMTSNVGASTLRQ-S 672
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+ +GF D ++ Y +K V ELK+ FRPEFLNR+DE+IVF L K +K+I +M
Sbjct: 673 KSLGFTAQLDGQE--YKDMKGKVMSELKKAFRPEFLNRIDELIVFHSLEKEHIKKIVSLM 730
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
++ RL + IE +++E ++ +EG++P YGARPLRRA+ + +ED ++E++L I
Sbjct: 731 ANQLTKRLSEQGIEFELSEEAMAKIADEGFDPEYGARPLRRALQKQVEDRLSEELLRGNI 790
Query: 813 KEGDSVIVDVDSDGNVTV 830
+G V +DV DG TV
Sbjct: 791 AKGQHVKMDV-KDGEYTV 807
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAMRLGHNNIGTEHILLGLVREGEGIAAKALVALGLSPEKIQ 61
Query: 151 TQVIRMVGESTE 162
T+V ++G+ E
Sbjct: 62 TEVENLIGKGEE 73
>gi|258513609|ref|YP_003189831.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777314|gb|ACV61208.1| ATPase AAA-2 domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 810
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/757 (58%), Positives = 588/757 (77%), Gaps = 29/757 (3%)
Query: 84 GGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLG 143
G V + MF T + KV+ LA EAR LGHNY+G+EHLLLGL+ EGEGVAA+VL LG
Sbjct: 70 GKGVAQEMF--LTPRGKKVLELAIAEARSLGHNYVGTEHLLLGLISEGEGVAAQVLNALG 127
Query: 144 ADPSNIRTQVIRMVGESTEA---VGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPV 199
AD +R+ +++M+G + +G G +GN + L+EYG +LT++A E KLDPV
Sbjct: 128 ADIEQVRSMIMQMLGGGQSSQGGCASGQCGSKAGNVQTKALDEYGRDLTEMAREDKLDPV 187
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
VGR+ +IERV+Q+L RRTKNNP L+G+PGVGKTA+ EGLAQRI+SG+VP+T+ K+V++L
Sbjct: 188 VGREKEIERVIQVLSRRTKNNPVLLGDPGVGKTAVVEGLAQRISSGNVPETLLSKRVVSL 247
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+ LVAGTKYRGEFE+RLKK+ +EI ++ I+LFIDE+HTLIGAGAAEGAIDAANILKP
Sbjct: 248 DLAALVAGTKYRGEFEDRLKKVTQEITKAGNIVLFIDELHTLIGAGAAEGAIDAANILKP 307
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
+LARGE+QCIGATTLDEYRK+IEKD ALERRFQP+ V E +V+ETI ILKGLR+RYE HH
Sbjct: 308 ALARGEMQCIGATTLDEYRKYIEKDAALERRFQPINVEEATVEETIAILKGLRDRYEAHH 367
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
++R +DEALV+AA+L+ +YISDRFLPDKAIDL+DEA SRVR+ P + ++LE++ +
Sbjct: 368 RVRISDEALVNAAKLADRYISDRFLPDKAIDLMDEASSRVRMLAFTAPPDLKDLERKTEK 427
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQIS------ALVDKGKEMSKAETEAGDVGPV 493
+ KEK EA+ Q+FEKA LRD+E LK ++ L G E++
Sbjct: 428 VRKEKEEAINSQEFEKAARLRDQEQSLKKELEDRREAWNLTKGGNELA------------ 475
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
V+E DI H+V++WTGIPV+K++ +ESDRLLKMEE LH+RVIGQ+EAV+A+SRA+RRAR G
Sbjct: 476 VSEEDIAHVVASWTGIPVKKLAEEESDRLLKMEEILHQRVIGQEEAVRAVSRAVRRARAG 535
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LK+P RP+ SFIF GPTGVGK+ELA+ALA FG ++A+IR+DMSE+ME++ VS+L+G+P
Sbjct: 536 LKDPGRPVGSFIFLGPTGVGKTELARALAEALFGDDDALIRIDMSEYMEKYAVSRLVGAP 595
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGY EGGQLT+AVRR+PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTDS+GR VDF+
Sbjct: 596 PGYVGYEEGGQLTKAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSQGRAVDFR 655
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 733
NT++IMTSNVG S I K G +GF ++ SY+++K VT+EL++ FRPEFLNR+DE
Sbjct: 656 NTVIIMTSNVGVSHIRKIG-SLGFQ---TAENDSYSKMKGDVTQELRKTFRPEFLNRVDE 711
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
IVF L + + EI +MLK+V RL +I+++ TE +E + +G++ +YGARPLRR
Sbjct: 712 TIVFHSLEQKHLNEIVGLMLKDVLGRLAENEIKVEATEAAKELLASKGFDETYGARPLRR 771
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
I + +ED ++E++L +K+G+ V+++V DG + +
Sbjct: 772 EIQKQVEDRLSEELLKGAVKKGEHVVLNV-VDGEILI 807
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF++FTE+A KV +LAQ+EA+R+ YIG+EHLLLGL+REGEGVAA+VLE+L D +R
Sbjct: 1 MFDKFTERAKKVFVLAQDEAKRMATPYIGTEHLLLGLIREGEGVAAKVLESLNIDAETVR 60
Query: 151 TQVIRMVG 158
V ++VG
Sbjct: 61 QAVGQLVG 68
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/731 (60%), Positives = 565/731 (77%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH Y+G+EH+LL L+REGEGVAARVL N G + R QV+
Sbjct: 81 YTPRAKKVIELSLDESRKLGHAYVGTEHILLALIREGEGVAARVLANTGVSINKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G + ++ +G + PTL+ +LT +A EG LDPV+GR +I RVV++L
Sbjct: 141 LLLG-NNDSNTSGNSSMTQTVNTPTLDSLARDLTAVAREGSLDPVIGRSKEITRVVEVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPSV+ETIQI+ GLR+RYE HH+++ +DEA+ +AA+L
Sbjct: 320 DEYRKYIEKDAALERRFQPIQVDEPSVEETIQIINGLRDRYEAHHRVKISDEAVEAAAKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR +P +ELE +L I EKN AV GQ+FE
Sbjct: 380 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEDKLEGIKSEKNAAVSGQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E LK ++ L + KE + G V DI +V+ WTGIPV K+
Sbjct: 440 KAAALRDTEQKLKQELEQLKKEWKE------KQGKEESTVYVDDIAQVVAMWTGIPVSKI 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES +LL +EE LHKRV+GQ EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 AQAESAKLLNLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY
Sbjct: 554 TELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K +
Sbjct: 614 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYRKH 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + S +KS + EELK+ FRPEFLNR+DEMIVF L K +KEI +M
Sbjct: 673 VGFGAGLNA--SKDKDMKSTMLEELKKAFRPEFLNRIDEMIVFHSLEKDHLKEIVSLMAN 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DIELQ+T+ E++ EEGY+P YGARPLRRA+ + +ED ++E++L + +
Sbjct: 731 SLKKRLKEQDIELQLTDAALEKISEEGYDPQYGARPLRRALQKHVEDRLSEELLKGTLDK 790
Query: 815 GDSVIVDVDSD 825
+V++D +D
Sbjct: 791 TQTVVLDYVND 801
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ LAQEEA RL H IG+EH+LLGL+REG G+AA+ LE + P I
Sbjct: 2 MFNRFTQRAQKVLQLAQEEAIRLKHKEIGTEHILLGLIREGGGIAAKALEAINISPQMIE 61
Query: 151 TQVIRMVGESTEAVG 165
T + +VG+ TE VG
Sbjct: 62 TGIEELVGKGTEDVG 76
>gi|253577148|ref|ZP_04854468.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843392|gb|EES71420.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 814
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/727 (59%), Positives = 569/727 (78%), Gaps = 10/727 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSHHGTPTNVN-TPTLDSLARDLTAAAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PSV+E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSVEEAIQILHGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYIQDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLESRLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ KE + G VT DI +V++WTGIPV K+
Sbjct: 438 KAAALRDTEQKIREELDTTKNQWKE------KQGRTDSEVTPEDIAQVVASWTGIPVNKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLL ME+ LH+RVIGQ+EAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETERLLNMEKILHERVIGQEEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDENAVIRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++ R
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGADAIKR-NTR 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + Y +K V EELK+ FRPEFLNR+DE+IVF L + + +I +M +
Sbjct: 671 LGFTAVQD-AGADYENMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEQHIGQIVTLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL+ D++ +T+R + + + GY+P+YGARPLRRAI + +ED ++E++L +K+
Sbjct: 730 ELRKRLREYDVDFTLTDRAKAFLAKVGYDPAYGARPLRRAIQKHIEDRLSEELLTGNVKK 789
Query: 815 GDSVIVD 821
GDS+ +D
Sbjct: 790 GDSLTID 796
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHVLLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|379724697|ref|YP_005316828.1| protein ClpC [Paenibacillus mucilaginosus 3016]
gi|386727451|ref|YP_006193777.1| protein ClpC [Paenibacillus mucilaginosus K02]
gi|378573369|gb|AFC33679.1| ClpC [Paenibacillus mucilaginosus 3016]
gi|384094576|gb|AFH66012.1| protein ClpC [Paenibacillus mucilaginosus K02]
Length = 814
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/736 (59%), Positives = 573/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+E V G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEVVSPNHGNPANVN-TPTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS DE IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPDEAIQILHGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR +P + ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEASSKVRLRSYTVPPDLKKLESRLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + ++ KE + G VT DI +V++WTGIPV K+
Sbjct: 438 KAASLRDTEQKLREELDSTKNEWKE------KQGRTDSEVTPDDIAQVVASWTGIPVVKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+ RLL+ME LH RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 AEEETQRLLQMESILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E ++IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ VI+K
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADVIKKNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D Y +K V ELK+ FRPEFLNR+DE+IVF L + + +I +M +
Sbjct: 671 LGFTATID-AGKEYGNMKDKVMGELKKSFRPEFLNRIDEIIVFHSLDEAHIGQIVSLMAE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK ++++ +T+ + + +EGY+PS+GARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLKEQEVDFVLTDAAKAFLAKEGYDPSFGARPLRRAIQKHIEDRLSEELLRGNISK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GD++ +D + DG++ V
Sbjct: 790 GDTLTID-EKDGDLVV 804
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLSLAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVESLIGRGQE 73
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/731 (60%), Positives = 565/731 (77%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH Y+G+EH+LL L+REGEGVAARVL N G + R QV+
Sbjct: 81 YTPRAKKVIELSLDESRKLGHAYVGTEHILLALIREGEGVAARVLANTGVSINKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G + ++ +G + PTL+ +LT +A EG LDPV+GR +I RVV++L
Sbjct: 141 LLLG-NNDSNTSGNSSITQTVNTPTLDSLARDLTAVAREGSLDPVIGRSKEITRVVEVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPSV+ETIQI+ GLR+RYE HH+++ +DEA+ +AA+L
Sbjct: 320 DEYRKYIEKDAALERRFQPIQVDEPSVEETIQIINGLRDRYEAHHRVKISDEAVEAAAKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR +P +ELE +L I EKN AV GQ+FE
Sbjct: 380 SDRYISDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEDKLEGIKSEKNAAVSGQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E LK ++ L + KE + G V DI +V+ WTGIPV K+
Sbjct: 440 KAAALRDTEQKLKQELEQLKKEWKE------KQGKEESTVYVDDIAQVVAMWTGIPVSKI 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES +LL +EE LHKRV+GQ EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 AQAESAKLLNLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY
Sbjct: 554 TELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K +
Sbjct: 614 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYRKH 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + S +KS + EELK+ FRPEFLNR+DEMIVF L K +KEI +M
Sbjct: 673 VGFGAGLNA--SKDKDMKSTMLEELKKAFRPEFLNRIDEMIVFHSLEKDHLKEIVSLMAN 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DIELQ+T+ E++ EEGY+P YGARPLRRA+ + +ED ++E++L + +
Sbjct: 731 SLKKRLKEQDIELQLTDAALEKISEEGYDPQYGARPLRRALQKHVEDRLSEELLKGTLDK 790
Query: 815 GDSVIVDVDSD 825
+V++D +D
Sbjct: 791 TQTVVLDYVND 801
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ LAQEEA RL H IG+EH+LLGL+REG G+AA+ LE + P I
Sbjct: 2 MFNRFTQRAQKVLQLAQEEAIRLKHKEIGTEHILLGLIREGGGIAAKALEAINISPQMIE 61
Query: 151 TQVIRMVGESTEAVG 165
T + +VG+ TE VG
Sbjct: 62 TGIEELVGKGTEDVG 76
>gi|326391133|ref|ZP_08212679.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|345018568|ref|YP_004820921.1| ATPase AAA-2 domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392939610|ref|ZP_10305254.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
gi|325992832|gb|EGD51278.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033911|gb|AEM79637.1| ATPase AAA-2 domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291360|gb|EIV99803.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
Length = 816
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/734 (60%), Positives = 582/734 (79%), Gaps = 9/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR +Y+G+EH+LLGLLREGEGVA R+L G D + +R +++
Sbjct: 81 YTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGEGVAVRILMEQGIDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M+ E A G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMLNEEP-AGGPAKAAKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTL
Sbjct: 260 EDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK++E+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+L
Sbjct: 320 DEYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA+R Q++E
Sbjct: 380 SHRYIADRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIRTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E L+ ++ L K K + + VGP +I +VS WTGIPV+K+
Sbjct: 440 KAAKIRDEEQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AEEESERLLHLEEVLHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 554 TELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K
Sbjct: 614 SVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQS-T 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF E +SY++IK + EL++ FRPEFLNR+DE+IVF QL+K ++++IADIM+K
Sbjct: 673 LGFMPQEKEDKASYDKIKETLMAELRKTFRPEFLNRVDEIIVFHQLSKEDIEKIADIMIK 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ +RLK +I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML E+K
Sbjct: 733 ELNNRLKENNIKLEFTPEAKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGEVKP 792
Query: 815 GDSVIVDVDSDGNV 828
GD +IV DG +
Sbjct: 793 GDELIVTA-KDGKI 805
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RFTE+A K + LAQEEAR HNY+G+EH+LLGLL+E EG+AARVL+ LG
Sbjct: 2 AMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYETT 61
Query: 150 RTQVIRMVG 158
R +V+ ++G
Sbjct: 62 REKVLSLIG 70
>gi|337751755|ref|YP_004645917.1| protein ClpC [Paenibacillus mucilaginosus KNP414]
gi|336302944|gb|AEI46047.1| ClpC [Paenibacillus mucilaginosus KNP414]
Length = 814
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/736 (59%), Positives = 572/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+E V G ++ N PTL+ +LT A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEVVSPNHGNPANVN-TPTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS DE IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPDEAIQILHGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDLIDEA S+VRLR +P + ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYIPDRFLPDKAIDLIDEASSKVRLRSYTVPPDLKKLESRLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + ++ KE + G VT DI +V++WTGIPV K+
Sbjct: 438 KAASLRDTEQKLREELDSTKNEWKE------KQGRTDSEVTPDDIAQVVASWTGIPVVKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+ RLL+ME LH RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 AEEETQRLLQMESILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E ++IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NTL+IMTSNVG+ VI+K
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNVGADVIKKNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D Y +K V ELK+ FRPEFLNR+DE+IVF L + + +I +M +
Sbjct: 671 LGFTATID-AGKEYGNMKDKVMGELKKSFRPEFLNRIDEIIVFHSLDEAHIGQIVSLMAE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK ++++ +T+ + + +EGY+PS+GARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLKEQEVDFVLTDAAKAFLAKEGYDPSFGARPLRRAIQKHIEDRLSEELLRGNISK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GD++ +D + DG++ V
Sbjct: 790 GDTLTID-EKDGDLVV 804
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLSLAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVESLIGRGQE 73
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/743 (58%), Positives = 579/743 (77%), Gaps = 13/743 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +V+ L+ +EARR+G NY+G+EHLLLGL+REGEGVAA+VL L + +R VI
Sbjct: 80 LTPRVKRVLELSVDEARRMGTNYVGTEHLLLGLIREGEGVAAQVLGALDVNQERVRQIVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++G + G GG+ G K TL++YG +LT +A E LDPVVGR+ +IERV
Sbjct: 140 QLLGGAGGMSQGQQPQPGCAGGACGTKTATLDQYGRDLTSMAREDNLDPVVGREKEIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
VQIL RRTKNNP LIG+PGVGKTA+ EGLAQRI +G+VP+ + K+++TLD+ LVAGTK
Sbjct: 200 VQILSRRTKNNPVLIGDPGVGKTAVVEGLAQRIVAGNVPEILLQKRLVTLDLASLVAGTK 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFEERLKK++EEI + ++I+FIDE+HT+IGAGAAEGAIDAANILKP+LARGELQCI
Sbjct: 260 YRGEFEERLKKVVEEITREKDVIVFIDELHTIIGAGAAEGAIDAANILKPALARGELQCI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKHIE+D ALERRFQP+ V EPSV+ET+QIL GLR++YE HH++R TD+AL
Sbjct: 320 GATTLDEYRKHIERDSALERRFQPITVEEPSVEETVQILTGLRDKYEAHHRVRITDDALK 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA+LS +YI+DRFLPDKAIDL+DEAGSRVRL+ P + ++LE+ + +I KEK AV
Sbjct: 380 AAARLSDRYITDRFLPDKAIDLMDEAGSRVRLQAFTAPPDVKDLEQRIEEICKEKEAAVN 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q+FEKA +LRD E L+ ++ GK + + + G V E DI IV++WTGI
Sbjct: 440 NQEFEKAAQLRDEESKLRQELD-----GKRSTWQQQKGGKKLEVTAE-DIAQIVASWTGI 493
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV+K++ +ESDRLL+MEE LH+RV+GQDEAV A+SRAIRRAR GLK+P RPI SFIF GP
Sbjct: 494 PVKKLAEEESDRLLRMEEILHQRVVGQDEAVAAVSRAIRRARAGLKDPKRPIGSFIFLGP 553
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELA+ALA FG E+AM+R+DMSE+ME+ VS+L+G+PPGYVGY EGGQLT+AV
Sbjct: 554 TGVGKTELARALAEAMFGDEDAMVRIDMSEYMEKFAVSRLVGAPPGYVGYDEGGQLTDAV 613
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG +I+
Sbjct: 614 RRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGVGLIK 673
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+ +GF + + ++SY +K V ++L++ FRPEFLNR+D++IVF L+++ +KEI
Sbjct: 674 R-ETTMGFKTN-EGANTSYENMKKRVMDDLRRAFRPEFLNRIDDIIVFHGLSQVHIKEIV 731
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+M++EV RL +I ++VT+ E + EG++ YGARPLRRAI + +ED ++E+ML
Sbjct: 732 GLMVQEVAGRLAENEIAIEVTDAAGEYLAREGFDEEYGARPLRRAIQKEIEDRLSEEMLR 791
Query: 810 REIKEGDSVIVDVDSDGNVTVLN 832
+ GD V++D ++ G + V+
Sbjct: 792 GTFRRGDRVLIDKETGGGLKVVK 814
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F RFT++A KV+MLAQEEA+R H Y+G+EH+LLGL+ EGEGVAA+ L +LG +R
Sbjct: 2 LFGRFTQRAQKVLMLAQEEAKRFNHPYVGTEHILLGLISEGEGVAAKALASLGVQADKVR 61
Query: 151 TQVIRMVGE 159
V + +G+
Sbjct: 62 AMVEQSIGQ 70
>gi|338813698|ref|ZP_08625791.1| clpc ATPase [Acetonema longum DSM 6540]
gi|337274331|gb|EGO62875.1| clpc ATPase [Acetonema longum DSM 6540]
Length = 811
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/742 (58%), Positives = 570/742 (76%), Gaps = 23/742 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T ++ KV+ LA + A+++GHNY+G+EHLLLGL+ EG+GVAA+VL +LGAD ++ +VI
Sbjct: 79 LTPRSKKVLELAVQHAQQMGHNYVGTEHLLLGLISEGDGVAAQVLVSLGADLQAVQAKVI 138
Query: 155 RMVGESTEAVGAGVGG--------GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
++G G + G G + P + E+G +L +LA+EGK+DPV+GR +I
Sbjct: 139 ELLG------GFAISGQAPQPKAPGQGQSTTPAVNEFGRDLNQLAQEGKIDPVIGRNAEI 192
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+QIL RRTKNNP LIGEPGVGKTA+AEGLAQ+I G VP+ + K+V++L+M +VA
Sbjct: 193 ERVIQILSRRTKNNPVLIGEPGVGKTAVAEGLAQQIVEGRVPEILRDKRVVSLNMASIVA 252
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G+KYRGEFEERLKK+MEEI+Q+ IILFIDE+HTLIGAGAAEGAIDAANILKPSLARGEL
Sbjct: 253 GSKYRGEFEERLKKVMEEIRQAGNIILFIDELHTLIGAGAAEGAIDAANILKPSLARGEL 312
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTLDEY+KHIEKD ALERRFQP+ V EP+V++ I IL+GLR+RYE HK + TDE
Sbjct: 313 QVIGATTLDEYKKHIEKDAALERRFQPIIVGEPTVEDAIAILRGLRDRYEAFHKAQITDE 372
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
A+ +A +LS++YI+DRFLPDKAIDL+DEA S+VRL+ LP + +E+E+ L +I+ EK
Sbjct: 373 AIDAAVKLSHRYIADRFLPDKAIDLMDEAASKVRLQAFSLPPDVKEIEQRLERISLEKEA 432
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A + Q+FEKA +LRD E ++ ++ K G VVT DI +V++W
Sbjct: 433 ASKAQEFEKAAQLRDEEKQVREELET-------RQKEWKHKGGEQVVVTAEDIAQVVASW 485
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV+K++ +ES+RLLK+E+ LH RVIGQ+EAV A+++A+RRAR GLK+P RPI SFIF
Sbjct: 486 TGIPVKKLAEEESERLLKLEQVLHNRVIGQEEAVSAVAKAVRRARSGLKDPKRPIGSFIF 545
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTGVGK+ELA+ALA FG E AMIRLDMSE+ME+HTVS+L+GSPPGYVGY EGGQLT
Sbjct: 546 LGPTGVGKTELARALAEAMFGDENAMIRLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLT 605
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
+A+RR+PY+VVLFDEIEKAH DVFN++LQILEDGRLTDSKGRTVDFKN ++IMTSNVG+
Sbjct: 606 DAIRRKPYSVVLFDEIEKAHYDVFNILLQILEDGRLTDSKGRTVDFKNAVIIMTSNVGAK 665
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
++K +GF E D KS V EE+K+ FRPEFLNR+DEMIVF LT E+K
Sbjct: 666 HLKKDAAAVGFLAGSSENDEKAA--KSRVMEEVKRTFRPEFLNRVDEMIVFSSLTSPELK 723
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
+I D+MLK+V RL I + V + +E +++EG++P +GARPLRRAI +L+ED ++E
Sbjct: 724 QIIDLMLKDVAKRLSEYAIAVDVQDAAKEIIMKEGHDPDFGARPLRRAIQKLVEDPISEM 783
Query: 807 MLAREIKEGDSVIVDVDSDGNV 828
+L RE+ GD+++ DV DG +
Sbjct: 784 LLRREVAAGDTILADVAEDGQL 805
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M RFTE+A K + LA++EA R H YIG+EHLLLGL++EG GVAA+ LE L D ++
Sbjct: 1 MLNRFTERAQKALELARQEAIRFRHGYIGTEHLLLGLIKEGGGVAAKALEALDVDAETVQ 60
Query: 151 TQVIRMVGESTEAVG 165
Q+ + +G E G
Sbjct: 61 EQIEQAIGYGQEQPG 75
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/738 (60%), Positives = 580/738 (78%), Gaps = 11/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+V GGG+S PTL+ +LT +A EG+LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESVSGHGGGGASHVNTPTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+V+E+IQILKGLR+RYE HH++ +DEA+V A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEACSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ KE E VT DI +VS+WTGIPV K+
Sbjct: 439 KAASLRDMEQRLREELEETKRAWKEKQGQENSE------VTVEDIAAVVSSWTGIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E++RLLK+EE LH RV+GQDEAVKA+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AETETERLLKLEEILHARVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+A+IR+DMSE+ME+H+ S+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEMEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNVGADALKR-NKY 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + + Y +K V +ELK+ FRPEFLNR+DE+IVF L K +K+I +M
Sbjct: 672 VGFNI--QDGNQQYKDMKGKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLKQIVRLMAD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI+L++TE E++ EG++ YGARPLRRA+ + +ED ++E++L I +
Sbjct: 730 TLVKRLKEQDIDLELTEAAIEKIAAEGFDLEYGARPLRRALQKHIEDRLSEELLKGTIAK 789
Query: 815 GDSVIVDVDSDGNVTVLN 832
G V VDV DG VL+
Sbjct: 790 GQKVAVDV-KDGEFVVLS 806
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGNE 73
>gi|410582488|ref|ZP_11319594.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
gi|410505308|gb|EKP94817.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
Length = 834
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/740 (61%), Positives = 586/740 (79%), Gaps = 10/740 (1%)
Query: 95 FTEKAIKVIM-LAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KV+M LA EEAR LGHNY+G+EH+LLGL+REGEGVAA+VLEN+GAD +R V
Sbjct: 80 YTPRAKKVVMELAPEEARLLGHNYVGTEHILLGLIREGEGVAAKVLENMGADLDRVRQTV 139
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
I+++G T A + P L+ +G +LT++AEEGKLDPV+GR +IERV+QIL
Sbjct: 140 IKLLG-GTAAPAPAARQRRQKSTTPVLDNFGRDLTQMAEEGKLDPVIGRDKEIERVIQIL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAI EGLAQRIA G VP+ ++ ++V+ LD+G LVAG+KYRGE
Sbjct: 199 SRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGKVPEILKDRRVVALDLGALVAGSKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+M+EI+++ IILFIDE+HT+IGAGAAEGAIDAA+ILKP+LARGELQ IGATT
Sbjct: 259 FEERLKKVMDEIRRAGNIILFIDEMHTIIGAGAAEGAIDAASILKPALARGELQTIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRKH+EKD ALERRFQP+ V EPSV++ IQIL+GLR+RYE HH++ TD+A+V+A +
Sbjct: 319 LDEYRKHVEKDAALERRFQPIMVEEPSVEDAIQILRGLRDRYEAHHRVEITDDAIVAAVK 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
L+ +YISDRFLPDKAIDLIDEA SR RL+ P E +E+E+ L +I KEK AV+ Q+F
Sbjct: 379 LADRYISDRFLPDKAIDLIDEAASRARLQAFVAPPELKEIEQRLEEIRKEKEAAVQSQEF 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E L ++ ++ S+ + + + VVT DI IVS WTGIPV +
Sbjct: 439 EKAANLRDQEQKLVEELE------RKKSEWQQQQLNEKIVVTADDIAQIVSNWTGIPVRR 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
+ ES+RLLK+EE LH+R++GQD+AV+A++RAIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 493 LEQAESERLLKLEEILHERIVGQDDAVRAVARAIRRARAGLKDPRRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELAKALA FG E+AMI LDMSE+MERHTVS+L+GSPPGYVGY EGGQLTE VRRRP
Sbjct: 553 KTELAKALAEALFGDEDAMIVLDMSEYMERHTVSRLVGSPPGYVGYEEGGQLTEQVRRRP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VV+FDEIEKAHP+VFN++LQILE+GRLT++KGRTVDF+NT++IMTSNVG+ +I + G
Sbjct: 613 YSVVVFDEIEKAHPEVFNVLLQILEEGRLTEAKGRTVDFRNTVIIMTSNVGADLIRRQG- 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
R+GF +++ Y +K + +E+K+ FRPEFLNR+DE+IVF LT+ + +I D+ML
Sbjct: 672 RVGFQA-AEQEAPDYEDMKRKIMDEVKRTFRPEFLNRIDELIVFHALTEEHLMKIVDLML 730
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +RLK + L+VTE + ++V+EG + YGARPLRR I RL+ED ++E+MLA K
Sbjct: 731 KRVAERLKEHGLALEVTEAAKRKLVKEGSDVVYGARPLRRTITRLVEDPLSEEMLAGRFK 790
Query: 814 EGDSVIVDVDSDGNVTVLNG 833
EGD+V+VDVD++G + G
Sbjct: 791 EGDTVLVDVDAEGKIVFRQG 810
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 60/79 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF R++E+A +VI+LAQEEARRL +NY+G+EHLLLGL+REG G+AA+ L++LG + +R
Sbjct: 1 MFGRYSERAQRVILLAQEEARRLNYNYVGTEHLLLGLIREGTGIAAKALQSLGINLEQVR 60
Query: 151 TQVIRMVGESTEAVGAGVG 169
+V +++G + +G
Sbjct: 61 AEVEKIIGRGNGPIQGEIG 79
>gi|404330422|ref|ZP_10970870.1| class III stress response-related ATPase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 815
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/736 (58%), Positives = 569/736 (77%), Gaps = 10/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +VI L+ +EAR++GH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKRVIELSMDEARKIGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G G G S+ PTL+ +LT +A EG LDPV+GR +IERV+++L
Sbjct: 140 QLLGSHEATAGGAQGRASAHASTPTLDSLARDLTAMAGEGGLDPVIGRSKEIERVIEVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+AEGLAQ I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAVAEGLAQEIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSL+RGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLSRGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+KV EP+ +E++ ILKGLR+RYE HH+++ TD A+ +A L
Sbjct: 320 DEYRKYIEKDAALERRFQPIKVKEPTKEESVLILKGLRDRYEAHHRVKITDAAVEAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEA S+VRLR P + +ELE++L + KEK+ AV+ Q+FE
Sbjct: 380 SDRYISDRFLPDKAIDLMDEASSKVRLRSYTAPPDLKELEQKLETVKKEKDAAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E LK Q+ + KE E V D+ +V+ WTGIPV ++
Sbjct: 440 KAASLRDSEQKLKEQVDVCEKEWKEKQGKENTQ------VLADDVAQVVANWTGIPVVRL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
ES+RLL ME+ LHKRVIGQDEA++AIS A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 494 EQKESERLLHMEDILHKRVIGQDEAIRAISHAVRRARAGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG EEA+IR+DMSE+ME+HT S+L+GSPPGYVG+ EGGQLTE VR++PY
Sbjct: 554 TELARAVAETLFGDEEAIIRIDMSEYMEKHTTSRLVGSPPGYVGHEEGGQLTEKVRQKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT +IMTSNVG+S +++ +
Sbjct: 614 SVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSNVGASELKR-NKY 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + + + Y +K V ELK+ FRPEFLNR+DE+IVF +LTK ++ +I ++
Sbjct: 673 VGFTVGGE--NHEYKEMKDKVMGELKRAFRPEFLNRIDEIIVFHELTKPQLMQIVTLLAG 730
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RL ++ I + +T++ + ++VEEGY+P YGARPLRRA+ R +ED ++E++L I++
Sbjct: 731 HLKHRLSSQGIVIDITDKAKAQIVEEGYDPEYGARPLRRALQRRVEDKLSEELLKGNIEK 790
Query: 815 GDSVIVDVDSDGNVTV 830
G VI+D +DG+ V
Sbjct: 791 GTQVIIDY-ADGDYVV 805
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RLGHN IG+EH+LLGL+REG+G+AA+ L L P I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRLGHNNIGTEHILLGLVREGDGIAAKALLALNLSPEKIQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +E V
Sbjct: 62 KEVEALIGRGSETV 75
>gi|251799676|ref|YP_003014407.1| ATPase AAA [Paenibacillus sp. JDR-2]
gi|247547302|gb|ACT04321.1| ATPase AAA-2 domain protein [Paenibacillus sp. JDR-2]
Length = 817
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/748 (58%), Positives = 574/748 (76%), Gaps = 12/748 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G S PTL+ +LT A EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSS-HGSPSNVSTPTLDGLARDLTAYAREGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TD+A+V A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKITDDAIVQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRL +P ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEASSKVRLNSYTVPPNLKQLENRLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ KE + G VT DI +V++WTGIPV K+
Sbjct: 438 KAAALRDTEQKIREELDVTKNQWKE------KQGRTDSEVTPEDIAQVVASWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E++RLLKME+ LH RVIGQ++AVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AEEETERLLKMEDILHDRVIGQEDAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+IMTSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNVGADQIKRNS-S 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D +N++K V ELK+ FRPEFLNR+DE IVF L + + +I +M
Sbjct: 671 LGFTAVQD-SGREFNQMKDKVMTELKKSFRPEFLNRIDETIVFHSLEQEHIAQIVTLMSD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL+ ++++ +T+ + + +EG++P YGARPLRRAI + +ED ++E +L +I++
Sbjct: 730 ELRKRLREQEVDFILTDSAKAFLAKEGFDPQYGARPLRRAIQKHIEDRLSEDLLLGKIRK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPESLA 842
GDS +D + DG +TV N S PE A
Sbjct: 790 GDSFTID-EKDGGLTV-NKSEAVPEEPA 815
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVEALIGRGQE 73
>gi|354585457|ref|ZP_09004344.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
gi|353188726|gb|EHB54246.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
Length = 818
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/746 (58%), Positives = 575/746 (77%), Gaps = 11/746 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+
Sbjct: 438 KAAALRDTEQKLREELEITKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A++R+DMSE+ME+H+ ++L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDENAVVRIDMSEYMEKHSTARLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D YN +K+ V +ELK+ FRPEFLNR+DE+IVF L + + EI +M
Sbjct: 671 LGFTAVTD-AGRDYNNMKTKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL+ D+E ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L +K+
Sbjct: 730 ELRKRLREFDVEFELTDQAKAFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLKGNVKK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPES 840
GD++I+D + +G ++V S A S
Sbjct: 790 GDALIID-EENGELSVRKKDSVAAAS 814
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REG+G+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|374320677|ref|YP_005073806.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
gi|357199686|gb|AET57583.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
Length = 814
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/736 (58%), Positives = 571/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E +QIL GLR+RYE HH+++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAVQILYGLRDRYEAHHRVKITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ KE + G VT DI +V+ WTG+PV ++
Sbjct: 438 KAAALRDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSQL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E+ RLL MEE LH RVIGQDEAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 KEEETHRLLNMEELLHGRVIGQDEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ VI++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQVIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + Y+ +K V EELK+ FRPEFLNR+DE+IVF L + + EI +M +
Sbjct: 671 LGFTAVVD-AGADYDNMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL +++ ++T++ + + +EG++P+YGARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLNEYEVDFELTDKAKAFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNITK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+ +D + +G +TV
Sbjct: 790 GDSLFID-EENGALTV 804
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|117927429|ref|YP_871980.1| ATPase [Acidothermus cellulolyticus 11B]
gi|117647892|gb|ABK51994.1| ATPase AAA-2 domain protein [Acidothermus cellulolyticus 11B]
Length = 839
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/755 (58%), Positives = 587/755 (77%), Gaps = 16/755 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G + +L +++G NLT+ A EGKLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKAEATAGGPAEGTQSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP L+GEPGVGKTAI EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLVGEPGVGKTAIVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIVLFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HHK+ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVNEPSLAHTIEILKGLRDRYESHHKVTITDGALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QL+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QD
Sbjct: 380 QLADRYISDRFLPDKAIDLIDEAGSRLRIRRMTAPPDLREFDEKIAAVRREKESAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I ++SA TGI
Sbjct: 440 FEKAAALRDKEKQLLA--------AKAQREREWKAGDMD-VVAEVDEDLIAEVLSAATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +E+ RLL+MEE LHKRVIGQDEA+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEETARLLRMEEELHKRVIGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+++I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDSLIQLDMSEFMEKHTVSRLFGSPPGYVGYDEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDIA 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF + D + SY R+++ V +ELKQ+FRPEFLNR+D++IVF QLT+ E+ +I
Sbjct: 671 K-GFNMGFSKENDTQ-GSYERMRAKVQDELKQHFRPEFLNRVDDIIVFHQLTEDEIVKIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RL+ +D+ +++T + + ++GY+P GARPLRR I RL+ED ++EK+L
Sbjct: 729 DLMIAKVDERLRDRDMSIELTPAAKALLAQKGYDPVLGARPLRRTIQRLVEDPVSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
E++ G ++VD ++ G G P+ A P
Sbjct: 789 GELRPGHIIVVDAENVGTPDARLTFRGEPKPAAVP 823
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|134298058|ref|YP_001111554.1| ATPase [Desulfotomaculum reducens MI-1]
gi|134050758|gb|ABO48729.1| ATPase AAA-2 domain protein [Desulfotomaculum reducens MI-1]
Length = 812
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/727 (60%), Positives = 581/727 (79%), Gaps = 10/727 (1%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KV+ LA EE+R +GHNY+G+EHLLLGL++EGEGVAA+VL +LGAD +R QVI
Sbjct: 81 TPRAKKVLELAVEESRSMGHNYVGTEHLLLGLVKEGEGVAAQVLVSLGADLGKVRQQVIN 140
Query: 156 MVGESTEAVGAGVGGG--SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
M+G G G G + G K +L+++ +LT+LA+E KLDPVVGR +IERV+Q+L
Sbjct: 141 MLGSGGGQTPGGNGQGCPAGGCKTVSLDQFSRDLTRLAKEEKLDPVVGRAKEIERVIQVL 200
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQRI G+VP+ + ++V+TLD+ +VAGTKYRGE
Sbjct: 201 SRRTKNNPVLIGEPGVGKTAIAEGLAQRIIEGNVPEILLNRRVVTLDLAAMVAGTKYRGE 260
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+MEEI+Q+ II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGATT
Sbjct: 261 FEDRLKKIMEEIRQAGNIIVFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGATT 320
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V+ET+QILKG+R++YE HH++ TDEAL +AA+
Sbjct: 321 LDEYRKYIEKDSALERRFQPIQVDEPTVEETLQILKGIRDKYEAHHRVSITDEALEAAAK 380
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DRFLPDKAIDLIDE+ SRVR++ P + ++ EK+L +I KEK A+ Q+F
Sbjct: 381 LSDRYITDRFLPDKAIDLIDESASRVRIKAFTAPPDLKQKEKDLEEIRKEKESAINNQEF 440
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA ELRDRE L +I ++ +E + +T+ G+ VV+E DI HIV++WTG+PV+K
Sbjct: 441 EKAAELRDREQALLTEI----NQARE-NWNQTKGGN-NLVVSEQDIAHIVASWTGVPVQK 494
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ +ES++LL +EE LH+RV+GQD+AVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVG
Sbjct: 495 IAQEESEKLLNLEEVLHRRVVGQDDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVG 554
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+A++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR+P
Sbjct: 555 KTELARALAESLFGDEDALVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKP 614
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFN++LQ+LEDGRLTDS+GR VDF+NT++IMTSNVG S I+ G
Sbjct: 615 YSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSRGRVVDFRNTVIIMTSNVGLSTIKSVG- 673
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
++GF ++ + Y ++K V E LK+ FRPEFLNR+DE IVF LT+ +++I D+ML
Sbjct: 674 KVGFAATAQDQ-ADYEKMKERVEEGLKRTFRPEFLNRIDETIVFHPLTREHIQQIVDLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+EV R++ ++ L TE +E + + GY+ YGARPLRR I R +ED ++E+++ K
Sbjct: 733 QEVAQRMEEHEVYLSFTEGAKEILAQVGYSEEYGARPLRREIQRRVEDHLSEELIKGTFK 792
Query: 814 EGDSVIV 820
+G+ V++
Sbjct: 793 KGERVVI 799
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 58/74 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+RFT++A KV++LAQEEARRL + YIG+EH+LLGL+REGEG+AAR LE + + ++
Sbjct: 1 MFQRFTQRAQKVLILAQEEARRLKYPYIGTEHILLGLIREGEGIAARALEQMNINADKVK 60
Query: 151 TQVIRMVGESTEAV 164
T V ++V EAV
Sbjct: 61 TTVEQIVEIGNEAV 74
>gi|296271367|ref|YP_003653999.1| ATPase AAA-2 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296094154|gb|ADG90106.1| ATPase AAA-2 domain protein [Thermobispora bispora DSM 43833]
Length = 834
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/753 (58%), Positives = 588/753 (78%), Gaps = 16/753 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + E AG S+ + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLHGYQGKEPAAAGATQESTPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP L+GEPGVGKTA+ EGLAQ+I G+VP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLVGEPGVGKTAVVEGLAQKIVKGEVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERL+K+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLRKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSIAHTIEILKGLRDRYEAHHRVSITDGALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDR+LPDKAIDLIDEAGSR+R+R P + RE ++++ +I +EK A+ QD
Sbjct: 380 TLADRYISDRYLPDKAIDLIDEAGSRMRIRRMTAPPDLREYDEQIAKIRREKESAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIP 510
FE+A LRD+E L+ + +E + E +AGD+ V VTE I +++ TGIP
Sbjct: 440 FERAAALRDQEKQLQLK--------RERREKEWKAGDMDHVAEVTEELIAEVLATATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ +ES RLL+MEE LHKR+IGQD+A+KA+SRAIRR R GLK+P RP SFIF+GP+
Sbjct: 492 VFKLTEEESQRLLRMEEELHKRIIGQDDAIKALSRAIRRTRAGLKDPRRPGGSFIFAGPS 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL+KALA + FG E+A+I LDMSE+ME+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTELSKALAEFLFGDEDALIMLDMSEYMEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDEIEKAHPD+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+ I K
Sbjct: 612 RKPFSVVLFDEIEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDISK 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G +GF D+ +++Y+R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ E+ +I D
Sbjct: 672 -GIGVGF-AKSDDTETTYDRMKAKVQEELKQHFRPEFLNRVDDIVVFHQLTQKEIIQIVD 729
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+M+ V +RLK +D+ L +T+ ++ + E GY+P GARPLRR I R +ED+++EK+L
Sbjct: 730 LMIARVDERLKDRDMGLVLTDAAKKLLAERGYDPVMGARPLRRTIQREIEDTLSEKILYG 789
Query: 811 EIKEGDSVIVDVDSDGNVT--VLNGSSGAPESL 841
E++ G V VDV+ +G V G PE L
Sbjct: 790 ELRPGHIVKVDVEGEGENAKFVFTGEPKPPEVL 822
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ A
Sbjct: 61 QQVEEIIGQGQSA 73
>gi|261409551|ref|YP_003245792.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286014|gb|ACX67985.1| ATPase AAA-2 domain protein [Paenibacillus sp. Y412MC10]
Length = 818
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/749 (58%), Positives = 576/749 (76%), Gaps = 12/749 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLHTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+
Sbjct: 438 KAAALRDTEQKLREELEVTKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A++R+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I+K
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKKNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D YN +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M
Sbjct: 671 LGFTAVTD-AGRDYNNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK ++ ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L + +
Sbjct: 730 ELRKRLKEFEVHFELTDKAKAFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLKGNVTK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPESLAD 843
GDS+++D +++G + V+N S G + A+
Sbjct: 790 GDSLVID-EANGEL-VVNKSEGVTAASAE 816
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REG+G+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|304405673|ref|ZP_07387332.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
gi|304345712|gb|EFM11547.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
Length = 822
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/746 (58%), Positives = 574/746 (76%), Gaps = 12/746 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G + PTL+ +LT A EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSS-HGAPANVSTPTLDGLARDLTAFAREGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +G++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIIAGEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q++ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQANNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILHGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRL+ +P + LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEASSKVRLKTYTVPPNLKLLENRLEDIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ ++ KE + G VT DI +V++WTG+PV K+
Sbjct: 438 KAAALRDTEQKLREELDITRNQWKE------KQGRTDSEVTPEDIAQVVASWTGVPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+ RLLKMEE LH RVIGQ +AVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AEEETQRLLKMEEILHDRVIGQTDAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+IMTSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNVGADQIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + ++K V ELK+ FRPEFLNR+DE IVF L + + +I +M +
Sbjct: 671 LGFTAVQD-SGREFIQMKDKVMGELKKSFRPEFLNRIDETIVFHSLEQEHIAQIVTLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK ++++ +TE + + +EG++P YGARPLRRAI + +ED ++E +L I +
Sbjct: 730 ELRKRLKEQEVDFSLTEAAKNFLAKEGFDPQYGARPLRRAIQKHIEDRLSEDLLMGTITK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPES 840
GD++++D + DG + V++ SS PE+
Sbjct: 790 GDTLLID-EKDGAL-VVHRSSAEPEA 813
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVEALIGRGQE 73
>gi|172056112|ref|YP_001812572.1| ATPase [Exiguobacterium sibiricum 255-15]
gi|171988633|gb|ACB59555.1| ATPase AAA-2 domain protein [Exiguobacterium sibiricum 255-15]
Length = 815
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/736 (58%), Positives = 567/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EHLLLGL+REGEGVAARVL NLG S R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHLLLGLIREGEGVAARVLNNLGISLSKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S A G SG PTL+ +LT+ A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLGNSETTANASQAG--SGVATPTLDGLARDLTQQARETRLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+ EGLAQ+I + +VP+T+ K+V+ LDMG LVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAVVEGLAQQIINNEVPETLRNKRVMVLDMGTLVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ DE QIL GLR+RYE HH++ TDEA+ A L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVAEPTTDEATQILFGLRDRYEAHHRVTITDEAIQEAVTL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRLR P +E+E +L I K+K+EAV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKEVEAKLEGIRKDKDEAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ L ++ + + G+ VT+ DI +V+ WTG+PV K+
Sbjct: 438 KAASLRDTEQKLRDELERLKEEW------QNKQGNEKLEVTKDDIAQVVANWTGVPVTKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+DRLL++EE LH RVIGQ+EAVK+IS+AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AEEETDRLLRLEEILHGRVIGQNEAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARAVAEAMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQ+L+DGRLTDSKGRTVDF+NT+++MTSNVG+S +++ +
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSNVGASALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D+ D Y +K V EELK+ FRPEFLNR+DE IVF L K ++EI +M K
Sbjct: 671 VGFAVS-DDTDREYKDMKGKVMEELKRAFRPEFLNRIDETIVFHSLEKKHIEEIVKLMAK 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RL + + ++T ++ + GY+P YGARP+RRA+ R ED ++E +LA +I++
Sbjct: 730 TLEKRLAEQQVHFELTPAALSKIADIGYDPEYGARPIRRALQREAEDRLSEALLAGDIQK 789
Query: 815 GDSVIVDVDSDGNVTV 830
G+ V +DV+ DG V
Sbjct: 790 GERVALDVE-DGEFIV 804
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A +V+ LAQEEA RLGH+ IG+EH+LLGL+REG+G+AA+ L LG I+
Sbjct: 2 MFGRFTERAQRVLALAQEEAVRLGHHNIGTEHILLGLVREGDGIAAKALTALGLSSDKIQ 61
Query: 151 TQVIRMVG 158
+V ++G
Sbjct: 62 MEVEALIG 69
>gi|297582418|ref|YP_003698198.1| ATPase AAA-2 domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297140875|gb|ADH97632.1| ATPase AAA-2 domain protein [Bacillus selenitireducens MLS10]
Length = 815
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/741 (58%), Positives = 577/741 (77%), Gaps = 16/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVG-----AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++G S G AG GG +G PTL+ +LT +A+EG++DPV+GR +I+RV
Sbjct: 140 QLLGNSDNGNGQNGSMAG-QGGQAGASTPTLDSLARDLTAIAKEGQVDPVIGRSKEIQRV 198
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNP LIGEPGVGKTAI+EGLAQ+I +VP+ + K+V+TLDMG +VAGTK
Sbjct: 199 IQILSRRTKNNPVLIGEPGVGKTAISEGLAQQIVDNEVPEILRNKRVMTLDMGTVVAGTK 258
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFE+RLKK+M+EI+ + +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCI
Sbjct: 259 YRGEFEDRLKKVMDEIRNAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCI 318
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATT+DEYRK+IEKD ALERRFQP++V EP+V+E++QIL GLR+RYE HH++ TDEA+
Sbjct: 319 GATTMDEYRKYIEKDAALERRFQPIQVDEPTVEESVQILAGLRDRYEAHHRVTITDEAIK 378
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+A ++S +YISDRFLPDKAIDLIDEAGS+VRL P +E E+EL ++ KEK+ +V+
Sbjct: 379 AAVEMSDRYISDRFLPDKAIDLIDEAGSKVRLSTYTAPPNLKEKEQELEELRKEKDASVQ 438
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q+FEKA LRD E LK ++ L D+ K+ E VT DI +VS WTG+
Sbjct: 439 SQEFEKAASLRDNEQKLKDELETLKDEWKKKQGQEDSE------VTMEDIAQVVSTWTGV 492
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +E+DRLLKME+ LH RVIGQDEAV A+S+A+RRAR GLK+P RPI SFIF GP
Sbjct: 493 PVSKLAEEETDRLLKMEDILHGRVIGQDEAVTAVSKAVRRARAGLKDPKRPIGSFIFLGP 552
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE V
Sbjct: 553 TGVGKTELARAVAETLFGDEDAIIRIDMSEYMEKHNTSRLVGSPPGYVGHDEGGQLTEKV 612
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+PY+V+L DEIEKAHP+VFN++LQ+LEDG LTDSKGR VDF+NT +IMTSNVG+ +
Sbjct: 613 RRKPYSVILLDEIEKAHPEVFNILLQVLEDGFLTDSKGRRVDFRNTAVIMTSNVGAQAL- 671
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K + +GF +++D+ Y +KS V EELK+ FRPEFLNR+DE IVF L K + EI
Sbjct: 672 KQEKSLGF--TANQEDAKYKDMKSKVMEELKKSFRPEFLNRIDETIVFHSLEKSHISEIV 729
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+M E+ RLK ++I+ +++++ +E++ +EG++P YGARPLRRA+ + +ED ++E++L
Sbjct: 730 TLMAGELQKRLKEQEIDFELSDKAKEKIADEGFDPEYGARPLRRALQKQVEDRLSEELLR 789
Query: 810 REIKEGDSVIVDVDSDGNVTV 830
I +G SV++DV+ DG V
Sbjct: 790 GTISKGQSVVLDVE-DGEYVV 809
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH+ IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLSLAQEEASRLGHSNIGTEHILLGLIREGEGIAAKALKGLGLGADKIQ 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + G
Sbjct: 62 DEVEKLIGVGEQPAG 76
>gi|333896156|ref|YP_004470030.1| ATPase AAA [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111421|gb|AEF16358.1| ATPase AAA-2 domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 810
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/726 (60%), Positives = 579/726 (79%), Gaps = 8/726 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR NYIG+EH+LLGL+REGEGVA R+L LG D + +R +++
Sbjct: 81 YTPRAKRVLELSFAEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+MV E + N P L ++G +LT+LA EGKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMVSEEPSGTTNKAQRAKNTN-TPNLNQFGRDLTELAREGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+
Sbjct: 260 EDRLKNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTI 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKDPALERRFQP+ V EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+L
Sbjct: 320 DEYRKYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE +L + K+K EA+R Q++E
Sbjct: 380 SHRYITDRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E +K Q+ L K ++ S + ++ V +I IVS WTGIP +K+
Sbjct: 440 KAAKIRDEEQKVKEQLENLKSKWQQNSLVKEKS------VGAEEISQIVSLWTGIPTQKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LHKRVIGQDEAV A++RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AQEESERLLHLEEILHKRVIGQDEAVDAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E A++R+DMSE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+PY
Sbjct: 554 TELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQIL+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K
Sbjct: 614 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QTT 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + + + SY ++K + EELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+
Sbjct: 673 LGFMPESNAEKESYEKMKENILEELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMIA 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +I L+ T+ +E +++EGY+ +YGARPLRRAI +++E ++E ML EIK
Sbjct: 733 DLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEIKS 792
Query: 815 GDSVIV 820
GD V+V
Sbjct: 793 GDKVLV 798
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 55/69 (79%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RF+EKA KV+ AQEEAR L HNY+G+EH+LLGL++E +G+A+RVL++LG +I
Sbjct: 2 AMFGRFSEKAQKVLYQAQEEARSLYHNYVGTEHILLGLIKEEDGIASRVLKSLGVTYEDI 61
Query: 150 RTQVIRMVG 158
R +V ++G
Sbjct: 62 RAKVESLIG 70
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/737 (58%), Positives = 582/737 (78%), Gaps = 15/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T + VI L+ EEARR+GHNYIG+EHLLLGL++EGEG+AA+VL+ LG D R +V+
Sbjct: 80 YTPRVKTVIELSMEEARRMGHNYIGTEHLLLGLVKEGEGIAAKVLQELGVDLDKAREEVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKM------PTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++G S + G G + KM PTL+ +G +LTKLAEEGKLDPV+GR+ +IER
Sbjct: 140 KIIGGSQQPKGQANFGQAQNPKMANRDKTPTLDNFGRDLTKLAEEGKLDPVIGRKKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G+VP +E K+V+TL++ +VAGT
Sbjct: 200 VIQVLSRRTKNNPCLIGEPGVGKTAIAEGLAQKIIEGEVPKILENKRVVTLELSAVVAGT 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERL+KL++E+ S E+I+FIDE+HT+IGAGAAEGAIDA+NILKP+LA+GELQC
Sbjct: 260 KYRGEFEERLRKLIDELTDSGEVIIFIDEIHTMIGAGAAEGAIDASNILKPALAKGELQC 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV V EPS + T++ILKGLR+RYE HH+++ TD+A+
Sbjct: 320 IGATTLDEYRKYIEKDSALERRFQPVTVDEPSKEATVEILKGLRDRYEAHHRVQITDDAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
++ ++S +YI+DR+LPDKAIDLIDEA S V+L+ P + R+LE++L +I KEK AV
Sbjct: 380 EASVKMSDRYITDRYLPDKAIDLIDEAASNVKLKTNTAPPDMRKLEEDLEEIEKEKEAAV 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
+ QDFE+A +LRD+E ++K ++ + +K E + EA VTE DI IVS WTG
Sbjct: 440 KSQDFEQAAKLRDKEQEIKKELEDM-EKSWEKKQLSDEAQ-----VTEEDIARIVSDWTG 493
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV++++ +E++RLL ME+ LH+RV+GQ+EAV+++S AIRRAR GLK+P RPI SFIF G
Sbjct: 494 IPVKRLAQEETERLLNMEDALHQRVVGQEEAVQSVSNAIRRARSGLKDPKRPIGSFIFLG 553
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELA+ALA FG E+AMIRLDMSE+ME+HTVS+L+GSPPGYVG+ E GQLTE
Sbjct: 554 PTGVGKTELARALADVLFGDEDAMIRLDMSEYMEKHTVSRLLGSPPGYVGHEESGQLTEK 613
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRRRPY+V+L DEIEKAHP+VFN +LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVG+++I
Sbjct: 614 VRRRPYSVILLDEIEKAHPEVFNTLLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGANLI 673
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
+ ++GF E SY +K V ELK FRPEFLNR+DE+IVF L K + +I
Sbjct: 674 -RNESKVGFKPQTSE--DSYKEMKDNVMSELKNSFRPEFLNRVDEVIVFHALEKEHLSDI 730
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
++ML+E+ +R+ ++ L+ TE ++ + E+GY+P+YGARPLRR I + +ED ++EKML
Sbjct: 731 VELMLEELKERMAEFNMNLEFTEESKKHLAEQGYDPTYGARPLRRVIQKQVEDVLSEKML 790
Query: 809 AREIKEGDSVIVDVDSD 825
+ E G++V++D + +
Sbjct: 791 SGEFAHGETVVIDAEDN 807
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+Q+EA+RL HNYIG+EHLLLGL+REGEG+AA+ +NLG D +R
Sbjct: 1 MFARFTQRAQKVMALSQDEAKRLNHNYIGTEHLLLGLIREGEGIAAQTFKNLGVDLEEVR 60
Query: 151 TQVIRMVGESTEAVGAGVG 169
V +V E V VG
Sbjct: 61 EAVENLVQPGEEQVSGNVG 79
>gi|390456410|ref|ZP_10241938.1| ATPase AAA [Paenibacillus peoriae KCTC 3763]
Length = 814
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/727 (59%), Positives = 567/727 (77%), Gaps = 10/727 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+
Sbjct: 438 KAAALRDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E+ RLL ME+ LH+RVIGQDEAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 KEEETHRLLNMEQLLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +
Sbjct: 671 LGFTAVVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL +++ ++T++ + + +EG++P+YGARPLRRAI + +ED ++E++L+ I +
Sbjct: 730 ELRKRLNEYEVDFELTDKAKTFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLSGNISK 789
Query: 815 GDSVIVD 821
GDS+++D
Sbjct: 790 GDSLLID 796
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|329929240|ref|ZP_08282999.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
gi|328936799|gb|EGG33238.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
Length = 818
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/741 (58%), Positives = 570/741 (76%), Gaps = 11/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLHTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+
Sbjct: 438 KAAALRDTEQKLREELEVTKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A++R+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I+K
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKKNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D YN +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M
Sbjct: 671 LGFTAVTD-AGRDYNNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RLK ++ ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L + +
Sbjct: 730 ELRKRLKEFEVHFELTDKAKAFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLKGNVAK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSS 835
GDS+++D +++G + V S
Sbjct: 790 GDSLVID-EANGELVVNKNQS 809
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REG+G+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|308071007|ref|YP_003872612.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
gi|305860286|gb|ADM72074.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
Length = 814
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/736 (58%), Positives = 571/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+
Sbjct: 438 KAAALRDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E+ RLL MEE LH+RVIGQDEAVKA+SRAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETHRLLNMEELLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +
Sbjct: 671 LGFTAVVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL +++ ++T+ ++ + +EG++P+YGARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLNEYEVDFELTDNAKKFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNITK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+ +D + +G +TV
Sbjct: 790 GDSLFID-EENGALTV 804
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|304315908|ref|YP_003851053.1| ATPase AAA [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777410|gb|ADL67969.1| ATPase AAA-2 domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 810
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/727 (59%), Positives = 583/727 (80%), Gaps = 10/727 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR NYIG+EH+LLGL+REGEGVA R+L LG D + +R +++
Sbjct: 81 YTPRAKRVLELSFAEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+MV E E GA + N P L ++G +LT LA EGKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMVSE--EPSGAANKAQRAKNTNTPNLNQFGRDLTDLAREGKLDPVIGREKEIERVIQIL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNPCLIGEPGVGKTAIAEGLA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGE
Sbjct: 199 SRRTKNNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLK ++ E+ ++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT
Sbjct: 259 FEDRLKNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
+DEYRK+IEKDPALERRFQP+ V EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+
Sbjct: 319 IDEYRKYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRVKITDEAIEAAAK 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++YI+DR+LPDKAIDLIDEA SRVRL+ P E +ELE++L + K+K EA+R Q++
Sbjct: 379 LSHRYITDRYLPDKAIDLIDEAASRVRLKTVTAPPEIKELEEKLNMLNKDKEEAIRTQEY 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA ++RD E +K Q+ L K ++ S + ++ V +I IVS WTGIP +K
Sbjct: 439 EKAAKIRDEEQKIKEQLENLKSKWQQNSLVKDKS------VGAEEISQIVSLWTGIPTQK 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ +ES+RLL +EE LHKRVIGQDEAV A++RAIRRARVGLK+P RPI SFIF GPTGVG
Sbjct: 493 LAQEESERLLHLEEILHKRVIGQDEAVDAVARAIRRARVGLKDPRRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL+KALA FG E A++R+DMSE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+P
Sbjct: 553 KTELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQIL+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K
Sbjct: 613 YSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QT 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF + +E +SY ++K + +ELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+
Sbjct: 672 TLGFMPEGEENKASYEKMKENILDELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMI 731
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RLK +I L+ T+ +E +++EGY+ +YGARPLRRAI +++E ++E ML E+K
Sbjct: 732 ADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEVK 791
Query: 814 EGDSVIV 820
GD ++V
Sbjct: 792 SGDKILV 798
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 55/69 (79%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RF+EKA KV+ AQEEAR L HNY+G+EH+LLGL++E +G+A+RVL+NLG +I
Sbjct: 2 AMFGRFSEKAQKVLYQAQEEARSLYHNYVGTEHILLGLIKEEDGIASRVLKNLGVTYDDI 61
Query: 150 RTQVIRMVG 158
R +V ++G
Sbjct: 62 RAKVETLIG 70
>gi|271970316|ref|YP_003344512.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
gi|270513491|gb|ACZ91769.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
Length = 835
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/757 (58%), Positives = 590/757 (77%), Gaps = 18/757 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + E AG ++ + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLHGYQGKEPAAAGGPQEAAPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP L+GEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLVGEPGVGKTAVVEGLSQKIVKGEVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLSHTIEILKGLRDRYEAHHRVSITDGALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QL+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 QLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREYDEKIANVRRDKESAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIP 510
FEKA LRD+E L+ + +E + E +AGD+ V VTE I +++ TGIP
Sbjct: 440 FEKAAALRDQEKQLQLK--------RERREKEWKAGDMDVVAEVTEELIAEVLATATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ +ES RLL+ME+ LHKR+IGQD+A+K +SR+IRR R GLK+P RP SFIF+GP+
Sbjct: 492 VFKLTEEESQRLLRMEDELHKRIIGQDDAIKGLSRSIRRTRAGLKDPRRPGGSFIFAGPS 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL+KALA + FG E+A+I LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTELSKALAEFLFGDEDALIMLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDEIEKAHPD+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+ I K
Sbjct: 612 RKPFSVVLFDEIEKAHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGTRDISK 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G+ +GF D +S+Y+R+KS V EELKQ+FRPEFLNR+D+++VF QLT E+ +I D
Sbjct: 672 -GQGVGFAKSND-TESNYDRMKSKVQEELKQHFRPEFLNRVDDIVVFHQLTPKEIIKIVD 729
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+ML +V +RLK +D+ L+VT+ ++ + + GY+P GARPLRR I R LEDS++EK+L
Sbjct: 730 LMLAQVGERLKDRDMGLEVTQDAKQLLADRGYDPVMGARPLRRTIQRELEDSLSEKILYG 789
Query: 811 EIKEGDSVIVDVDSDG-NVTVLNGSSGAPESLADPLP 846
E++ G V + ++ +G N + AP AD +P
Sbjct: 790 ELRPGQIVKISIEGEGDNAKFVFVGEAAP---ADQVP 823
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ A
Sbjct: 61 QQVEEIIGQGQSA 73
>gi|390934090|ref|YP_006391595.1| ATPase [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569591|gb|AFK85996.1| ATPase AAA-2 domain protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 810
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/726 (59%), Positives = 579/726 (79%), Gaps = 8/726 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR NYIG+EH+LLGL+REGEGVA R+L LG D + +R +++
Sbjct: 81 YTPRAKRVLELSFAEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+MV E + N P L ++G +LT+LA EGKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMVSEEPSGTTNKAQRVKNTN-TPNLNQFGRDLTELAREGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT+
Sbjct: 260 EDRLKNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATTI 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKDPALERRFQP+ V EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+L
Sbjct: 320 DEYRKYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE +L + K+K EA+R Q++E
Sbjct: 380 SHRYITDRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E +K Q+ L K ++ S + ++ V +I IVS WTGIP +K+
Sbjct: 440 KAAKIRDEEQKVKEQLENLKSKWQQNSLVKEKS------VGAEEISQIVSLWTGIPTQKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LHKRVIGQDEAV A++RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AQEESERLLHLEEILHKRVIGQDEAVDAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E A++R+DMSE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+PY
Sbjct: 554 TELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQIL+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K
Sbjct: 614 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QTT 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + + + SY ++K + EELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+
Sbjct: 673 LGFMPESNAEKESYEKMKENILEELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMIA 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +I L+ T+ +E +++EGY+ +YGARPLRRAI +++E ++E ML EIK
Sbjct: 733 DLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEIKS 792
Query: 815 GDSVIV 820
GD ++V
Sbjct: 793 GDKILV 798
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 56/69 (81%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RF+EKA KV+ AQEEAR L HNY+G+EH+LLGL++E +G+A+RVL++LG +I
Sbjct: 2 AMFGRFSEKAQKVLYQAQEEARSLYHNYVGTEHILLGLIKEEDGIASRVLKSLGVTYEDI 61
Query: 150 RTQVIRMVG 158
R++V ++G
Sbjct: 62 RSKVESLIG 70
>gi|302390927|ref|YP_003826747.1| ATPase AAA [Acetohalobium arabaticum DSM 5501]
gi|302203004|gb|ADL11682.1| ATPase AAA-2 domain protein [Acetohalobium arabaticum DSM 5501]
Length = 813
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/747 (58%), Positives = 582/747 (77%), Gaps = 7/747 (0%)
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
G V+A FT + KV+ LA EEARRLG NYIG+EHLLLGL++EGEGVAARVL+N G
Sbjct: 72 GSPVQADKLNFTPRTKKVLNLAMEEARRLGQNYIGTEHLLLGLVKEGEGVAARVLKNSGV 131
Query: 145 DPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+ +R +++ +G + +A G + PTL+++ +LT LAEE KLDPV+GR+
Sbjct: 132 ELDKLRKKIMNELGTTEKAGKFNQQGRKRNSNTPTLDDFSRDLTALAEEEKLDPVIGRKQ 191
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+I+RV+Q+L RR KNNPCLIGEPGVGKTAIAEGLA IA+ DVP+T+ K+V+ LD+ L
Sbjct: 192 EIQRVIQVLSRRKKNNPCLIGEPGVGKTAIAEGLALMIANDDVPETLTDKRVLALDLSSL 251
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG+KYRGEFE+RLK +M EI ++ +II+FIDE+H L+GAG AEGAIDAANILKP+LARG
Sbjct: 252 VAGSKYRGEFEKRLKAVMNEINEAGDIIIFIDELHNLVGAGGAEGAIDAANILKPALARG 311
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQCIGATTLDEYRKHIEKD ALERRFQ V V EPS++ET+ IL+GLR+ YE HH+++ T
Sbjct: 312 ELQCIGATTLDEYRKHIEKDSALERRFQSVLVEEPSIEETVSILEGLRDVYEAHHRVKIT 371
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEA+ +AA LS++YI+DRFLPDKAIDL+DEAGS++RL+ +P E +EL KEL + KEK
Sbjct: 372 DEAIKAAANLSHRYITDRFLPDKAIDLVDEAGSKIRLQDNTVPSEIKELNKELESVEKEK 431
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
AV+ Q+FEKA LRD+E LK ++ S+ + + G ++T+ DI IVS
Sbjct: 432 EAAVKAQEFEKAANLRDKEKQLKEELEET------KSEWKNQKGRDESLITKEDIAEIVS 485
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
W+G+PV K++ DES +LL++EE LH+R++GQDEA++A+S+A+RRAR GLK+P RPI SF
Sbjct: 486 DWSGVPVTKLTEDESKKLLRLEEELHERIVGQDEAIEAVSQAVRRARAGLKDPKRPIGSF 545
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF GPTGVGK+ELAK LA F EEAMIR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQ
Sbjct: 546 IFLGPTGVGKTELAKTLAEAMFDDEEAMIRIDMSEYMEKHAVSRLVGAPPGYVGHEEGGQ 605
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++V+L DEIEKAHP+VFNM+LQ+LEDG+LTDS+GRTVDFKNT++IMTSNVG
Sbjct: 606 LTEQVRRQPFSVILLDEIEKAHPEVFNMLLQVLEDGQLTDSQGRTVDFKNTIIIMTSNVG 665
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+++IE +GF ++SY R+K VT ELK+ FRPEFLNRLDE IVF L
Sbjct: 666 ANLIENQS-GVGFTPSEKNAETSYQRMKEKVTSELKKQFRPEFLNRLDETIVFHALELEH 724
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+KEI D+ML+EVF+RL K+I ++VT+ +E + E+G++ +GARPL+R I R++E+ ++
Sbjct: 725 IKEIIDLMLEEVFERLDEKEITIEVTDDAKEVIAEKGFDKEFGARPLKRTIRRMMENPLS 784
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVL 831
EK++A E +GD ++VDVD + N+T +
Sbjct: 785 EKLIAGEFSDGDHIVVDVDEEENLTFI 811
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 57/76 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F RFTE+A KV++LAQEEA+ LGH+Y+G+EHLLLGL+ EGEG+A++ LE+ ++
Sbjct: 2 IFGRFTERARKVLVLAQEEAKDLGHSYVGTEHLLLGLISEGEGIASKTLEDFDLKSEELK 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G+ V A
Sbjct: 62 VEVNKLIGDKGSPVQA 77
>gi|310644235|ref|YP_003948994.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|309249186|gb|ADO58753.1| ATPase AAA-2 domain-containing protein [Paenibacillus polymyxa SC2]
gi|392304928|emb|CCI71291.1| ATP-dependent Clp protease ATP-binding subunit clpC [Paenibacillus
polymyxa M1]
Length = 814
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/736 (58%), Positives = 571/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVRL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+
Sbjct: 438 KAAALRDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E+ RLL ME+ LH+RVIGQ+EAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 KEEETHRLLNMEQLLHERVIGQEEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +
Sbjct: 671 LGFTAVVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL +++ ++T++ + + +EG++P+YGARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLNEYEVDFELTDKAKNFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNISK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+ +D + +G +TV
Sbjct: 790 GDSLYID-EENGALTV 804
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|375310836|ref|ZP_09776101.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
gi|375077204|gb|EHS55447.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
Length = 814
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/736 (58%), Positives = 571/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G + PTL+ +LT A+E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGAPANVSTPTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++LE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ ++ KE + G VT DI +V+ WTG+PV K+
Sbjct: 438 KAAALRDTEQKIREELDVTKNQWKE------QQGRTDSEVTPEDIAQVVAIWTGVPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E+ RLL ME+ LH+RVIGQ+EAVKA+SRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 KEEETHRLLNMEQLLHERVIGQEEAVKAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAQAIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D + Y+ +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M +
Sbjct: 671 LGFTAVVD-AGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVSLMSE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL +++ +T++ + + +EG++P+YGARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLNEYEVDFDLTDKAKTFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNIAK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+++D + +G +TV
Sbjct: 790 GDSLLID-EENGALTV 804
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|315649734|ref|ZP_07902818.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
gi|315274922|gb|EFU38298.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
Length = 818
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/736 (58%), Positives = 569/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EAV + G PTL+ +LT +A+EG LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAVSSH-HGTPQNVSTPTLDSLARDLTAIAKEGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIINNEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ I+LFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +PS +E IQIL GLR+RYE HH+++ TDEA+ A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEQAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++ E L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLHTYTIPPNLKDQEAHLEDIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ ++ KE + G VT DI +V+ WTGIPV K+
Sbjct: 438 KAAALRDTEQKLREELEITKNQWKE------KQGRTDSEVTPEDIADVVANWTGIPVNKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLL +EE LH RVIGQ+EAVKA+SRA+RRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETERLLNLEEILHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A++R+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+I+TSNVG+ I+K
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNVGAEAIKKNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D YN +K V +ELK+ FRPEFLNR+DE+IVF L + + EI +M
Sbjct: 671 LGFTAVSD-SGRDYNNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHIAEIVTLMSD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL +++ ++T++ + + +EGY+P++GARPLRRAI + +ED ++E++L I +
Sbjct: 730 ELRKRLLEFEVQFELTDKAKTFIAKEGYDPAFGARPLRRAIQKHIEDRLSEELLRGNITK 789
Query: 815 GDSVIVDVDSDGNVTV 830
GDS+I+D +++G + V
Sbjct: 790 GDSLIID-EANGELVV 804
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REG+G+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVETLIGRGQE 73
>gi|407475965|ref|YP_006789842.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
gi|407060044|gb|AFS69234.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
Length = 815
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/736 (58%), Positives = 567/736 (77%), Gaps = 11/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EHLLLGL+REGEGVAARVL NLG S R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHLLLGLIREGEGVAARVLNNLGISLSKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S A G SG PTL+ +LT+ A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLGNSETTANASQAG--SGVATPTLDGLARDLTQQARETRLDPVIGRAKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+ EGLAQ+I + +VP+T+ K+V+ LDMG LVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAVVEGLAQQIVNNEVPETLRNKRVMVLDMGTLVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQC+GATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCVGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ DE QIL GLR+RYE HH++ TDEA+ A L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVAEPTTDEATQILFGLRDRYEAHHRVTITDEAIHEAVTL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEA S+VRLR P +E+E +L I K+K+EAV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLVDEAASKVRLRSYTAPPNLKEVEAKLEGIRKDKDEAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ L ++ + + G+ VT+ DI +V+ WTG+PV K+
Sbjct: 438 KAASLRDTEQKLRDELERLKEEW------QNKQGNEKLEVTKDDIAQVVANWTGVPVTKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+DRLL++EE LH RVIGQ+EAVK+IS+AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AEEETDRLLRLEEILHGRVIGQNEAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARAVAEAMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQ+L+DGRLTDSKGRTVDF+NT+++MTSNVG+S +++ +
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSNVGASALKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D+ D Y +K V +ELK+ FRPEFLNR+DE IVF L K ++EI +M K
Sbjct: 671 VGFAVS-DDTDREYKDMKGKVMDELKKAFRPEFLNRIDETIVFHSLEKKHIEEIVKLMAK 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RL + + ++T ++ + GY+P YGARP+RRA+ R ED ++E +LA +I++
Sbjct: 730 TLEKRLAEQQVHFELTPAALSKIADIGYDPEYGARPIRRALQREAEDRLSEALLAGDIQK 789
Query: 815 GDSVIVDVDSDGNVTV 830
G+ V +DV+ DG V
Sbjct: 790 GERVALDVE-DGEFIV 804
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A +V+ LAQEEA RLGH+ IG+EH+LLGL+REG+G+AA+ L LG I+
Sbjct: 2 MFGRFTERAQRVLALAQEEAVRLGHHNIGTEHILLGLVREGDGIAAKALTALGLSSDKIQ 61
Query: 151 TQVIRMVG 158
+V ++G
Sbjct: 62 MEVEALIG 69
>gi|407474767|ref|YP_006789167.1| chaperone protein ClpB [Clostridium acidurici 9a]
gi|407051275|gb|AFS79320.1| chaperone protein ClpB [Clostridium acidurici 9a]
Length = 818
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/744 (59%), Positives = 575/744 (77%), Gaps = 18/744 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + KV L+ EEAR G NYIG+EHLLLGL++EGEGVAA +L N G D R +VI
Sbjct: 81 FTPRTKKVFELSFEEARTFGQNYIGTEHLLLGLIKEGEGVAAAILRNSGIDLETARKEVI 140
Query: 155 RMVGESTEAVGAGVGGGS----SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
M+ ++ G G S + NK PTL+EYG +LT LA EGK+DPV+GR +IERV+
Sbjct: 141 SMLNQN---YGKGNSNNSQYNANLNKTPTLDEYGRDLTVLANEGKIDPVIGRSKEIERVI 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNPCLIGEPGVGKTAIAEGLAQ+I SG+VP+ ++ K+V+TLD+ +VAG KY
Sbjct: 198 QVLSRRTKNNPCLIGEPGVGKTAIAEGLAQKIVSGEVPELLKDKRVVTLDLPSMVAGAKY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK+MEE+ ++ +ILFIDE+HT+IGAGAAEG+IDA+NILKP+LARGELQ IG
Sbjct: 258 RGEFEERLKKVMEELIETKNVILFIDEMHTIIGAGAAEGSIDASNILKPALARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATT+DEYRK+IEKDPALERRFQPV V EPSV++TI+IL+GLR+RYE HH++ +DEAL +
Sbjct: 318 ATTIDEYRKYIEKDPALERRFQPVMVEEPSVEDTIKILEGLRDRYEAHHRVNISDEALKA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SR+RL+ P E ELE +L ++ EK EA+
Sbjct: 378 AVELSSRYITDRYLPDKAIDLIDEAASRIRLKSVTPPPELNELEGKLEELNHEKEEAINT 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
QD+EKA ++RD E +K Q+ ++ +T+ VV E DI H+VS WTGIP
Sbjct: 438 QDYEKAAKIRDEEKSIKEQLEK-----RQEEWNQTKHTSEKEVVYE-DIAHVVSTWTGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V+K+S +ES+RLL +EE LHK+VIGQD+AVK+++ A+RRARVGLK+PN+PI +FIF GPT
Sbjct: 492 VKKMSMEESERLLNLEEILHKKVIGQDQAVKSLASAVRRARVGLKDPNKPIGTFIFVGPT 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ L K+LA FG E+A+IR+DMSE+ME+H+VSKL+GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTYLTKSLAEALFGDEDAVIRIDMSEYMEKHSVSKLVGSPPGYVGYDEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+PY+V+LFDE+EKAHP+VFN++LQ+L+DGRLTDSKGR VDFKNT++I+TSNVG+S I+K
Sbjct: 612 RKPYSVILFDEVEKAHPEVFNILLQLLDDGRLTDSKGRVVDFKNTVIILTSNVGASTIKK 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSL--VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
+GF ++K K + EELK+ FRPEFLNR+DE IVF L K +K+I
Sbjct: 672 QN-TLGFSAPSEDKVEKKEYEKMKENIMEELKRTFRPEFLNRIDETIVFHPLNKDHIKQI 730
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
+IM+K++ RL+ +I ++VTE+ R+ + E+G++P YGARPL RAI L+E+ ++E+ML
Sbjct: 731 VNIMVKDLEKRLEKLNIHIEVTEKARDYIGEKGFDPDYGARPLERAIRNLVENELSEEML 790
Query: 809 AREIKEGDSVIVDVDSDGNVTVLN 832
I + DS V++D DG V N
Sbjct: 791 RGNISKDDS--VEIDFDGEKLVFN 812
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
A F RFTE+A +V+ LAQEEA RL HNYIG+EH+LLGL+ EGEG+AA L N+G D ++
Sbjct: 2 ATFGRFTERAQRVVYLAQEEAERLNHNYIGTEHILLGLVAEGEGIAANALINIGIDLDDL 61
Query: 150 RTQVIRMVGESTEAV 164
R QVI VGE E V
Sbjct: 62 RAQVIEAVGEGKEIV 76
>gi|402299365|ref|ZP_10818976.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
gi|401725403|gb|EJS98688.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
Length = 813
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/735 (57%), Positives = 571/735 (77%), Gaps = 15/735 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + + G +S PTL+ +LT +A E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLGSNEVGSSSQQSGATSHASTPTLDSLARDLTAIAREEALDPVIGRSKEIERVIQVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQSIIANEVPETLRNKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+++E+IQIL GLR+RYE HH++ TD+A+ A +L
Sbjct: 320 DEYRKYIEKDAALERRFQPIQVNEPTLEESIQILTGLRDRYEAHHRVTITDDAISEAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE+ L + KEK+ AV+ Q+FE
Sbjct: 380 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQRLEETRKEKDAAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPV 511
KA LRD E L+ ++ + ++ K+ E TEV DI +V++WTG+PV
Sbjct: 440 KAASLRDSEQRLREEVDEMKNEWKKKQGQEN---------TEVVVDDIAQVVASWTGVPV 490
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ +E++RLL+MEE LH RV+GQ+EAV +IS+A+RRAR GLK+P RPI SFIF GPTG
Sbjct: 491 SKLAEEETERLLRMEEILHGRVVGQEEAVVSISKAVRRARAGLKDPKRPIGSFIFLGPTG 550
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+A+A FG E+++IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE VRR
Sbjct: 551 VGKTELARAVAETLFGDEDSVIRIDMSEYMEKHATSRLVGSPPGYVGHEEGGQLTEKVRR 610
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S +++
Sbjct: 611 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSNVGASALKR- 669
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF ++ + ++ Y +K V ELK+ FRPEFLNR+DE+IVF L K V+EI ++
Sbjct: 670 NKYLGFAIESEGQE--YKDMKDKVMGELKRSFRPEFLNRIDEIIVFHSLEKKHVREITNL 727
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M +++ RL + IEL++TE+ +++ + GY+P YGARPLRRA+ + +ED ++E++L
Sbjct: 728 MAEQLKKRLYEQGIELELTEKALDKITDIGYDPEYGARPLRRALQKQVEDRLSEELLKGT 787
Query: 812 IKEGDSVIVDVDSDG 826
I +G ++DV D
Sbjct: 788 ISKGQKAVIDVKDDA 802
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALQALGLGSEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G+ E
Sbjct: 62 KEVETLIGKGQE 73
>gi|297545353|ref|YP_003677655.1| ATPase [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296843128|gb|ADH61644.1| ATPase AAA-2 domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 816
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/734 (59%), Positives = 580/734 (79%), Gaps = 9/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR +YIG+EH+LLG+LREGEGVA R+L G D + +R +++
Sbjct: 81 YTPRAKRVLELSLSEARRFNTSYIGTEHILLGILREGEGVAVRILMEQGIDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M+ E G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMLNEEPSG-GPAKATKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTL
Sbjct: 260 EDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+EYRK++E+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+L
Sbjct: 320 EEYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA++ Q++E
Sbjct: 380 SHRYIADRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIKTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E L+ ++ L K K + + VGP +I +VS WTGIPV+K+
Sbjct: 440 KAAKIRDEEQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LH+RVIGQDEAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AEEESERLLHLEEILHERVIGQDEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 554 TELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K
Sbjct: 614 SVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQA-T 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF E +S+ ++K + EL++ FRPEFLNR+DE+IVF QLTK ++++IADIM+K
Sbjct: 673 LGFMPQEKEDKASHEKVKETLMAELRKTFRPEFLNRVDEIIVFHQLTKEDIEKIADIMMK 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ DRLK +I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML ++K
Sbjct: 733 ELNDRLKENNIKLEFTPEGKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGKVKP 792
Query: 815 GDSVIVDVDSDGNV 828
GD +IV DG +
Sbjct: 793 GDELIVTA-KDGKI 805
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RFTE+A K + LAQEEAR HNY+G+EH+LLGLL+E EG+AAR L+ LG
Sbjct: 2 AMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKENEGIAARTLKKLGVTYETT 61
Query: 150 RTQVIRMVG 158
R +V+ ++G
Sbjct: 62 REKVLSLIG 70
>gi|417907371|ref|ZP_12551144.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
gi|341596264|gb|EGS38880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
Length = 817
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/732 (58%), Positives = 564/732 (77%), Gaps = 11/732 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K G V ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYEEAKNEWK------NSQGGVSTALSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHNRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGND--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ DRL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 KKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSD 825
EG V +D D D
Sbjct: 788 EGKEVTIDHDGD 799
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E VG
Sbjct: 62 EEVEKLIGHGQEQVG 76
>gi|52078581|ref|YP_077372.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|319649145|ref|ZP_08003353.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|404487450|ref|YP_006711556.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423680479|ref|ZP_17655318.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
gi|52001792|gb|AAU21734.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52346444|gb|AAU39078.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317388845|gb|EFV69664.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|383441585|gb|EID49294.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
Length = 810
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/736 (60%), Positives = 577/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV LA +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ GA G SS N PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNESGGAASGANSSAN-TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS +E+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEETKKTWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S + + +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELRR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ +Y +K V ELK+ FRPEF+NR+DE+IVF L K +K+I +M
Sbjct: 671 VGFNV--QDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKDIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++TE +E++ +EG + YGARPLRRAI + +ED ++E++L I++
Sbjct: 729 QLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIQK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|433654066|ref|YP_007297774.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292255|gb|AGB18077.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 810
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/727 (59%), Positives = 582/727 (80%), Gaps = 10/727 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR NYIG+EH+LLGL+REGEGVA R+L LG D + +R +++
Sbjct: 81 YTPRAKRVLELSFAEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+MV E E GA + N P L ++G +LT LA EGKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMVSE--EPSGAANKAQRAKNTNTPNLNQFGRDLTDLAREGKLDPVIGREKEIERVIQIL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNPCLIGEPGVGKTAIAEGLA+ I SG +P+ ++GK+V+TLDM +VAGTKYRGE
Sbjct: 199 SRRTKNNPCLIGEPGVGKTAIAEGLAEAIESGTIPEILKGKRVVTLDMASMVAGTKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLK ++ E+ ++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATT
Sbjct: 259 FEDRLKNVLNEVIKAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEIQVIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
+DEYRK+IEKDPALERRFQP+ V EPSV+ETI+ILKGLR++YE HH+++ TDEA+ +AA+
Sbjct: 319 IDEYRKYIEKDPALERRFQPIMVEEPSVEETIEILKGLRDKYEAHHRIKITDEAIEAAAK 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++YI+DR+LPDKAIDLIDEA SRVRL+ P E +ELE +L + K+K EA+R Q++
Sbjct: 379 LSHRYITDRYLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKLNMLNKDKEEAIRTQEY 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA ++RD E +K Q+ L K ++ S + ++ V +I IVS WTGIP +K
Sbjct: 439 EKAAKIRDEEQKIKEQLENLKSKWQQNSLVKDKS------VGAEEISQIVSLWTGIPTQK 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ +ES+RLL +EE LHKRVIGQ+EAV A++RAIRRARVGLK+P RPI SFIF GPTGVG
Sbjct: 493 LAQEESERLLHLEEILHKRVIGQNEAVDAVARAIRRARVGLKDPRRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL+KALA FG E A++R+DMSE+ME+ +VS+LIGSPPGYVGY EGG+LTE +RR+P
Sbjct: 553 KTELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGSPPGYVGYEEGGELTEKIRRKP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQIL+DGRLTDSKGRTVDFKNTL+IMTSNVG+ +I+K
Sbjct: 613 YSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTLIIMTSNVGAQLIKK-QT 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF + +E +SY ++K + +ELK+ FRPEFLNR+D++IVFRQLT+ ++++I D+M+
Sbjct: 672 TLGFMPEGEENKASYEKMKENILDELKKSFRPEFLNRIDDIIVFRQLTQDDIRKITDLMI 731
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RLK +I L+ T+ +E +++EGY+ +YGARPLRRAI +++E ++E ML E+K
Sbjct: 732 ADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRRAIQKVVESELSELMLKGEVK 791
Query: 814 EGDSVIV 820
GD ++V
Sbjct: 792 SGDKILV 798
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 55/69 (79%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RF+EKA KV+ AQEEAR L HNY+G+EH+LLGL++E +G+A+RVL+NLG +I
Sbjct: 2 AMFGRFSEKAQKVLYQAQEEARSLYHNYVGTEHILLGLIKEEDGIASRVLKNLGVTYDDI 61
Query: 150 RTQVIRMVG 158
R +V ++G
Sbjct: 62 RAKVETLIG 70
>gi|223042918|ref|ZP_03612966.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
gi|222443772|gb|EEE49869.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
Length = 817
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/732 (58%), Positives = 564/732 (77%), Gaps = 11/732 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K G V ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYEEAKNEWK------NSQGGVSTALSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHNRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGND--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ DRL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 KKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSD 825
EG V +D D D
Sbjct: 788 EGKEVTIDHDGD 799
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|429194529|ref|ZP_19186617.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
gi|428669694|gb|EKX68629.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
Length = 841
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/758 (58%), Positives = 583/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQDDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAASGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQADILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIGKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + DG+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGDGDAATFTFRGEEKSALPDVPPI 826
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|158319507|ref|YP_001512014.1| ATPase [Alkaliphilus oremlandii OhILAs]
gi|158139706|gb|ABW18018.1| ATPase AAA-2 domain protein [Alkaliphilus oremlandii OhILAs]
Length = 813
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/737 (56%), Positives = 577/737 (78%), Gaps = 11/737 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T + KV L+ EAR L HNY+G+EHLLLGL+ EG+G+A+++L LG + N+R V+
Sbjct: 81 YTPRTKKVFELSVAEARNLNHNYVGTEHLLLGLISEGDGIASKILVQLGVNLQNVREAVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ ++ A A SS + PTL ++G +L LA EGK+DPV+GR +I+RV+Q+L
Sbjct: 141 KLLNSNSSASNAKNYTASSDKETPTLNQFGRDLNDLAREGKIDPVIGRSKEIDRVIQVLS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTA+AEGLAQ+I G+VPD ++ K+V+TLD+ +VAG KYRGEF
Sbjct: 201 RRTKNNPCLIGEPGVGKTAVAEGLAQQIVEGNVPDILKDKRVVTLDLASMVAGAKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEEI+ D +ILFIDE+HT+IGAGAAEGAIDAANILKP+LARGE+Q IGATTL
Sbjct: 261 EDRLKKVMEEIRSVDNVILFIDEMHTIIGAGAAEGAIDAANILKPALARGEMQVIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+EYRKHIEKD ALERRFQP+ V EPS+++ I+IL+GLR++YE HH ++ TDEAL +A +L
Sbjct: 321 NEYRKHIEKDAALERRFQPITVEEPSIEDAIRILEGLRDKYEAHHGVKITDEALKAAVEL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+V++ P + R+LE+ L +++ EK EA+ QDFE
Sbjct: 381 SARYITDRFLPDKAIDLIDEAASKVKIFTVTTPPDLRDLEERLEKLSNEKEEAISVQDFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A +LRD E K AL ++ +++K +A +V+ +I +IVS WTG+PV ++
Sbjct: 441 RAAKLRDEEKQTK---EALAERKNDVNKRHKDA-----IVSSEEIANIVSDWTGVPVRRL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
ES++LL MEE LH RVIGQ+EAVK+I+RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 493 QQGESEKLLNMEEILHNRVIGQEEAVKSIARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG+E+ MIR+DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 553 TELSKALAESMFGNEDDMIRIDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQIL+DGRLTD++GRTVDFKNT++IMTSNVG+ I+K +
Sbjct: 613 SVVLFDEIEKAHPDVFNILLQILDDGRLTDAQGRTVDFKNTVIIMTSNVGAHTIKK-QKI 671
Query: 695 IGFDLDYDEK-DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF +E + Y ++K + +EL++ FRPEFLNR+D++IVF L + ++ +I D++L
Sbjct: 672 LGFAASQEESAQNEYEKMKENIMDELRRTFRPEFLNRIDDIIVFHGLEREDIGKIVDLLL 731
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RLK +I+L+++E + + ++G++P +GARPL+R I R +E+ ++E++L IK
Sbjct: 732 VDLKSRLKALEIDLEISEEAKNYIADKGFDPQFGARPLKREIQRTVENQLSEELLRGSIK 791
Query: 814 EGDSVIVDVDSDGNVTV 830
G +V+VD+ SDG + +
Sbjct: 792 AGSTVLVDL-SDGKIVI 807
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 57/69 (82%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RFTE+A +VI L+Q+ A++LGH+Y+G+EHLLLGL+RE EG+AA+ L+NLG + +I
Sbjct: 2 AMFGRFTERAQRVITLSQQIAQQLGHSYVGTEHLLLGLVREEEGIAAKALKNLGVEVEDI 61
Query: 150 RTQVIRMVG 158
+ +++ +G
Sbjct: 62 QQIIVQSIG 70
>gi|389573541|ref|ZP_10163615.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
gi|388426856|gb|EIL84667.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
Length = 811
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/746 (58%), Positives = 578/746 (77%), Gaps = 12/746 (1%)
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
G V +T +A KV L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG
Sbjct: 71 GQEVSQAIPHYTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGV 130
Query: 145 DPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+ R QV++++G + GA G +S PTL+ +LT +A+E LDPV+GR
Sbjct: 131 SLNKARQQVLQLLG--SNETGASAAGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSK 188
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+I+RV+++L RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +
Sbjct: 189 EIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRVMTLDMGTV 248
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARG
Sbjct: 249 VAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARG 308
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQCIGATTLDEYRK+IEKD ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ T
Sbjct: 309 ELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSIT 368
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEA+ +A +LS +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK
Sbjct: 369 DEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEK 428
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+ AV+ Q+FEKA LRD E L+ ++ KE + G V+ DI +VS
Sbjct: 429 DAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKE------KQGQENSEVSVDDIAMVVS 482
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+WTG+PV K++ E+D+LL ME+ LH RVIGQDEAV A+++A+RRAR GLK+P RPI SF
Sbjct: 483 SWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSF 542
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF GPTGVGK+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQ
Sbjct: 543 IFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQ 602
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG
Sbjct: 603 LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVG 662
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+S +++ + +GF++ ++ +Y +K V ELK+ FRPEF+NR+DE+IVF L K
Sbjct: 663 ASELKR-NKYVGFNV--QDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKH 719
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+KEI +M ++ RLK +D+ +++TE + ++ +EG + YGARPLRRAI + +ED ++
Sbjct: 720 LKEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLS 779
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTV 830
E++L I++G +++DV+ DG + V
Sbjct: 780 EELLKGNIEKGQHIVLDVE-DGEIVV 804
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH IG+EH+LLGL+REGEG+AA+ LE LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQ 61
Query: 151 TQVIRMVGESTEAVGA 166
+V ++G E A
Sbjct: 62 KEVESLIGRGQEVSQA 77
>gi|289579183|ref|YP_003477810.1| ATPase AAA [Thermoanaerobacter italicus Ab9]
gi|289528896|gb|ADD03248.1| ATPase AAA-2 domain protein [Thermoanaerobacter italicus Ab9]
Length = 816
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/734 (59%), Positives = 580/734 (79%), Gaps = 9/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +V+ L+ EARR +YIG+EH+LLG+LREGEGVA R+L G D + +R +++
Sbjct: 81 YTPRAKRVLELSLSEARRFNTSYIGTEHILLGILREGEGVAVRILMEQGIDFNRVREEIV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M+ E G PTL ++G +LT+LA +GKLDPV+GR+ +IERV+QIL
Sbjct: 141 KMLNEEPSG-GPAKATKVKNTNTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQ+I G++P+ ++ K+V+TLDM +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKRVVTLDMASMVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK ++ E+ ++ +ILFIDE+HTLIGAGAAEGAIDA+NILKP+LARGE+Q +GATTL
Sbjct: 260 EDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+EYRK++E+DPALERRFQP+ V EP+V+ETI+ILKGLR++YE HH+++ TDEAL +AA+L
Sbjct: 320 EEYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDEA SRVRL+ P E +ELE ++ + KEK EA++ Q++E
Sbjct: 380 SHRYIADRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIKTQEYE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E L+ ++ L K K + + VGP +I +VS WTGIPV+K+
Sbjct: 440 KAAKIRDEEQKLREELEKL--KAKWQQNSLSNEKSVGP----EEIAQVVSLWTGIPVKKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +EE LH+RVIGQ+EAV+A++RAIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 AEEESERLLHLEEILHERVIGQNEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG E AMIRLDMSE+MERHTVSKLIGSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 554 TELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKNT++IMTSNVG+ +++K
Sbjct: 614 SVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNVGAELLKKQA-T 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF E +S+ ++K + EL++ FRPEFLNR+DE+IVF QLTK ++++IADIM+K
Sbjct: 673 LGFMPQEKEDKASHEKVKETLMAELRKTFRPEFLNRVDEIIVFHQLTKEDIEKIADIMMK 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ DRLK +I+L+ T +E ++++GY+P+YGARPLRR I R++E+ ++E ML ++K
Sbjct: 733 ELNDRLKENNIKLEFTPEGKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGKVKP 792
Query: 815 GDSVIVDVDSDGNV 828
GD +IV DG +
Sbjct: 793 GDELIVTA-KDGKI 805
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF RFTE+A K + LAQEEAR HNY+G+EH+LLGLL+E EG+AAR L+ LG
Sbjct: 2 AMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKENEGIAARTLKKLGVTYETT 61
Query: 150 RTQVIRMVG 158
R +V+ ++G
Sbjct: 62 REKVLSLIG 70
>gi|449529856|ref|XP_004171914.1| PREDICTED: LOW QUALITY PROTEIN: chaperone protein ClpC,
chloroplastic-like, partial [Cucumis sativus]
Length = 458
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/449 (95%), Positives = 442/449 (98%)
Query: 399 ISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 458
SDRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR QDFEKAGE
Sbjct: 10 FSDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGE 69
Query: 459 LRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDE 518
LRDREM+LK +ISALVDKGKEMSKAE+EAGDVGPVVTEVDIQHIVS+WTGIPVEKVSTDE
Sbjct: 70 LRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDE 129
Query: 519 SDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 578
SDRLLKMEETLHKRVIGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA
Sbjct: 130 SDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELA 189
Query: 579 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 638
KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL
Sbjct: 190 KALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVL 249
Query: 639 FDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD 698
FDEIEKAHPDVFNMMLQ LEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR+GFD
Sbjct: 250 FDEIEKAHPDVFNMMLQFLEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFD 309
Query: 699 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 758
LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD
Sbjct: 310 LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFD 369
Query: 759 RLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 818
RLK K+I+LQVTERFR+RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV
Sbjct: 370 RLKAKEIDLQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 429
Query: 819 IVDVDSDGNVTVLNGSSGAPESLADPLPV 847
IVDVDSDGNVTVLNGSSGAPESL D +PV
Sbjct: 430 IVDVDSDGNVTVLNGSSGAPESLPDAIPV 458
>gi|403669832|ref|ZP_10935008.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC8E]
Length = 817
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/737 (59%), Positives = 569/737 (77%), Gaps = 11/737 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH YIG+EH+LL L+REGEGVAARVL N G S R QV+
Sbjct: 81 YTPRAKKVIELSVDESRKLGHTYIGTEHILLALIREGEGVAARVLNNEGVSLSKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G G G + PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 141 QLLGSHDTNAGTGGANATQTASTPTLDSLARDLTQIAREGSLDPVIGRSKEITRVIEVLS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGEF
Sbjct: 201 RRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPETLRGKRVMTLDMGTVVAGTKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 261 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPS +E IQI++GLR+RYE HH+++ TDEA+ +A L
Sbjct: 321 DEYRKYIEKDAALERRFQPIQVDEPSPEEAIQIIRGLRDRYEAHHRVKITDEAVEAAVTL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEAGS+VRLR P +ELE++L QI EKN AV+GQ+FE
Sbjct: 381 SNRYISDRFLPDKAIDLMDEAGSKVRLRSYTTPPNLKELEQKLEQIKAEKNSAVQGQEFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
KA LRD E LK ++ A + KE +AE++ VT DI +V+ WTGIPV K
Sbjct: 441 KAAGLRDTEQKLKDELDATKKEWKEKQGRAESK-------VTVNDIAEVVAMWTGIPVAK 493
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ +ES++LL +EE LHKRV+GQ AV+AISRAIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 494 IAQEESEKLLNLEEELHKRVVGQGAAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVG 553
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL +ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 554 KTELGRALAEVMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKP 613
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFN++LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 614 YSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFRNTVVIMTSNIGAEAL-KYRK 672
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF K + + K ++ EELK+ FRPEFLNR+DE IVF+ L K E+ EI M
Sbjct: 673 SVGFGAQETAKAAETS--KDVMLEELKKAFRPEFLNRIDETIVFQSLKKEELVEIVSKMS 730
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+++ RL + IEL++T +++ EEGY+P YGARP+RRA+ + +ED ++E++L E+
Sbjct: 731 EQLTKRLAEQKIELELTPAALDKIAEEGYDPEYGARPIRRALQKHVEDRLSEEILKGEVL 790
Query: 814 EGDSVIVDVDSDGNVTV 830
G+ V+ DVD+DG V
Sbjct: 791 TGNVVVFDVDADGKFIV 807
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF FT++A KV+ LAQEEA R+ H IG+EH+LLGL+REG G+AA+ LE + P I
Sbjct: 2 MFNHFTQRAQKVLQLAQEEAIRMKHEAIGTEHILLGLIREGTGIAAKALEAIEVTPEMIE 61
Query: 151 TQVIRMVGESTEAVG 165
+ ++VG T+ G
Sbjct: 62 EGIEKLVGVGTKDSG 76
>gi|157690869|ref|YP_001485331.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194017457|ref|ZP_03056068.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
gi|157679627|gb|ABV60771.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194010729|gb|EDW20300.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
Length = 811
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/746 (58%), Positives = 578/746 (77%), Gaps = 12/746 (1%)
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
G V +T +A KV L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG
Sbjct: 71 GQEVSQAIPHYTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGV 130
Query: 145 DPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+ R QV++++G + GA G +S PTL+ +LT +A+E LDPV+GR
Sbjct: 131 SLNKARQQVLQLLG--SNETGASAAGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSK 188
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+I+RV+++L RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +
Sbjct: 189 EIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRVMTLDMGTV 248
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARG
Sbjct: 249 VAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARG 308
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQCIGATTLDEYRK+IEKD ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ T
Sbjct: 309 ELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSIT 368
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEA+ +A +LS +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK
Sbjct: 369 DEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEK 428
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+ AV+ Q+FEKA LRD E L+ ++ KE + G V+ DI +VS
Sbjct: 429 DAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKE------KQGQENSEVSVDDIAMVVS 482
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+WTG+PV K++ E+D+LL ME+ LH RVIGQDEAV A+++A+RRAR GLK+P RPI SF
Sbjct: 483 SWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSF 542
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF GPTGVGK+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQ
Sbjct: 543 IFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQ 602
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG
Sbjct: 603 LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVG 662
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+S +++ + +GF++ ++ +Y +K V ELK+ FRPEF+NR+DE+IVF L K
Sbjct: 663 ASELKR-NKYVGFNV--QDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKH 719
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+KEI +M ++ RLK +D+ +++TE + ++ +EG + YGARPLRRAI + +ED ++
Sbjct: 720 LKEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLS 779
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTV 830
E++L I++G +++DV+ DG + V
Sbjct: 780 EELLKGNIEKGQQIVLDVE-DGEIVV 804
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH IG+EH+LLGL+REGEG+AA+ LE LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQ 61
Query: 151 TQVIRMVGESTEAVGA 166
+V ++G E A
Sbjct: 62 KEVESLIGRGQEVSQA 77
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/750 (58%), Positives = 577/750 (76%), Gaps = 13/750 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG +YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + VG GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNVG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +E IQILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SRVRLR LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVELSTKYITDRYLPDKAIDLIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++EKA ++RD M L+ ++ + + + P+VTE DI +IVS+WTGIP
Sbjct: 441 QEYEKAAKIRDEIMKLRQELEKIKNSWT------NDQQKTQPIVTEDDIAYIVSSWTGIP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ DES+RLLK+EE LH+RV+GQDEAVKA++RAIRR RVGLK+P RPI SFIF GPT
Sbjct: 495 VNKLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG+E+AMIR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE VR
Sbjct: 555 GVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+++I
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-T 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+++GF DEK +Y RIK V ELK+ FRPEFLNR+DE+IVF L + +VK+I +
Sbjct: 674 NPKKLGFSTSEDEKQRTYERIKENVMAELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVE 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK + +R+K + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 734 IMLKNLQERIKASEYYAEFTSSLVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEG 793
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
+IK+GD IVD DGN ++ + S
Sbjct: 794 KIKQGDEFIVDF-IDGNTEIIKKEKASTSS 822
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL++ G +
Sbjct: 1 MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKV 60
Query: 150 RTQVIRMVG 158
++ ++G
Sbjct: 61 IDEIEELIG 69
>gi|452972567|gb|EME72396.1| ATP-dependent Clp protease ClpC [Bacillus sonorensis L12]
Length = 810
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/730 (60%), Positives = 573/730 (78%), Gaps = 11/730 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV LA +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E+ G G G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNES-GGGASGANSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS +E+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEETKKTWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S + + +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELRR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ +Y +K V ELK+ FRPEF+NR+DE+IVF L K +K+I +M
Sbjct: 671 VGFNV--QDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKDIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++TE +E++ EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITK 788
Query: 815 GDSVIVDVDS 824
G +++DV++
Sbjct: 789 GQHIVLDVEN 798
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG P I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|407978585|ref|ZP_11159414.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
gi|407414781|gb|EKF36407.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
Length = 811
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/746 (58%), Positives = 578/746 (77%), Gaps = 12/746 (1%)
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
G V +T +A KV L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG
Sbjct: 71 GQEVSQAIPHYTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGV 130
Query: 145 DPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+ R QV++++G + GA G +S PTL+ +LT +A+E LDPV+GR
Sbjct: 131 SLNKARQQVLQLLG--SNETGASAAGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSK 188
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+I+RV+++L RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+ + K+V+TLDMG +
Sbjct: 189 EIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRVMTLDMGTV 248
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAGTKYRGEFE+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARG
Sbjct: 249 VAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARG 308
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQCIGATTLDEYRK+IEKD ALERRFQP++V +PSV+E+IQIL+GLR+RYE HH++ T
Sbjct: 309 ELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVEESIQILRGLRDRYEAHHRVSIT 368
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEA+ +A +LS +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK
Sbjct: 369 DEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEK 428
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+ AV+ Q+FEKA LRD E L+ ++ KE + G V+ DI +VS
Sbjct: 429 DAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKE------KQGQENSEVSVDDIAMVVS 482
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+WTG+PV K++ E+D+LL ME+ LH RVIGQDEAV A+++A+RRAR GLK+P RPI SF
Sbjct: 483 SWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSF 542
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF GPTGVGK+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQ
Sbjct: 543 IFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQ 602
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG
Sbjct: 603 LTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVG 662
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+S +++ + +GF++ ++ +Y +K V ELK+ FRPEF+NR+DE+IVF L K
Sbjct: 663 ASELKR-NKYVGFNV--QDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKH 719
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+KEI +M ++ RLK +D+ +++TE + ++ EEG + YGARPLRRAI + +ED ++
Sbjct: 720 LKEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIAEEGVDLEYGARPLRRAIQKHVEDRLS 779
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTV 830
E++L I++G +++DV+ DG + V
Sbjct: 780 EELLKGNIEKGQHIVLDVE-DGEIVV 804
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH IG+EH+LLGL+REGEG+AA+ LE LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQ 61
Query: 151 TQVIRMVGESTEAVGA 166
+V ++G E A
Sbjct: 62 KEVESLIGRGQEVSQA 77
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/750 (58%), Positives = 577/750 (76%), Gaps = 13/750 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG +YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + VG GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNVG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +E IQILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SRVRLR LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVELSTKYITDRYLPDKAIDLIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++EKA ++RD M L+ ++ + + + P+VTE DI +IVS+WTGIP
Sbjct: 441 QEYEKAAKIRDEIMKLRQELEKIKNSWT------NDQQKTQPIVTEDDIAYIVSSWTGIP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ DES+RLLK+EE LH+RV+GQDEAVKA++RAIRR RVGLK+P RPI SFIF GPT
Sbjct: 495 VNKLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG+E+AMIR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE VR
Sbjct: 555 GVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+++I
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-T 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+++GF DEK +Y RIK V ELK+ FRPEFLNR+DE+IVF L + +VK+I +
Sbjct: 674 NPKKLGFSTSEDEKQRTYERIKENVMAELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVE 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK + +R+K + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 734 IMLKNLQERIKASEYYAEFTPSLVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEG 793
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
+IK+GD IVD DGN ++ + S
Sbjct: 794 KIKQGDEFIVDF-VDGNTEIIKKEKASTSS 822
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL++ G +
Sbjct: 1 MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKV 60
Query: 150 RTQVIRMVG 158
++ ++G
Sbjct: 61 IDEIEELIG 69
>gi|51894268|ref|YP_076959.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
gi|51857957|dbj|BAD42115.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
Length = 833
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/743 (60%), Positives = 577/743 (77%), Gaps = 18/743 (2%)
Query: 95 FTEKAIKVIM-LAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
FT +A KV++ LA EEAR LGHNY+G+EH+LLGL+REGEGVAA+VL+NLGAD +R QV
Sbjct: 80 FTPRAKKVMVELAIEEARLLGHNYVGTEHILLGLIREGEGVAAQVLQNLGADLERVRNQV 139
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMP-----TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
I ++G GS+ K P TL+++G +L ++A +GKLDPV+GR+ +IER
Sbjct: 140 IHLLGGVPHPPAGSSMPGSAKVKGPKTSTSTLDQFGRDLNQMARDGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI G VP+ ++ K+V+ LD+ LVAG+
Sbjct: 200 VIQILTRRTKNNPVLIGEPGVGKTAIAEGLAQRIVDGRVPEILKDKRVVALDLASLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERLKK++EEI+ + +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGELQ
Sbjct: 260 KYRGEFEERLKKVLEEIRNAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGELQA 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATT+DEYRK++EKD ALERRFQPV V EPS ++ IQILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTIDEYRKYVEKDAALERRFQPVMVEEPSPEDAIQILKGLRDRYEAHHRVEITDAAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+A +LS +Y++DRFLPDKA+DLIDEA SRVRL P +ELE +L ++ KEK AV
Sbjct: 380 EAAVRLSDRYVTDRFLPDKAVDLIDEAASRVRLSTFVAPPNLKELEDKLEEVRKEKEAAV 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP--VVTEVDIQHIVSAW 506
+GQ+FEKA LRD+E LK ++ E K E + V VV E DI IVS W
Sbjct: 440 QGQEFEKAARLRDKETKLKEEL--------ERQKNEWQQKKVTAKCVVNEEDIATIVSQW 491
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIP K++ DES RLL +E+ LH++V+GQDEAV A++RAIRRAR GLK+P RPI SFIF
Sbjct: 492 TGIPATKLTMDESQRLLNLEKVLHEKVVGQDEAVAAVARAIRRARAGLKDPKRPIGSFIF 551
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTG GK+ LAKALA FG E+AM+R+DMSE+MERHT S+L+G+PPGYVGY EGGQLT
Sbjct: 552 LGPTGTGKTHLAKALAEALFGDEDAMVRIDMSEYMERHTTSRLVGAPPGYVGYEEGGQLT 611
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
EAVRRRPY VVL DEIEKAHP+VFN++LQ+LEDGRLT++KGRTVDF+NT++IMTSN G+
Sbjct: 612 EAVRRRPYCVVLLDEIEKAHPEVFNILLQVLEDGRLTEAKGRTVDFRNTVIIMTSNAGAQ 671
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I+ G +++GF + DEK+ Y R+KS V +E+K+ FRPEFLNRLDE+I+F LTK +K
Sbjct: 672 AIQ-GDKKLGFTVQEDEKE-RYERMKSRVMDEVKRLFRPEFLNRLDEIIIFHSLTKDHLK 729
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
EI + +K+V DRLK + +EL +++ E++V EGY+ +GARPLRRAI RL+ED ++E+
Sbjct: 730 EIVRLEVKKVADRLKEQGVELTLSDSALEKLVAEGYDEKFGARPLRRAIQRLVEDPLSEE 789
Query: 807 MLAREIKEGDSVIVDVDSDGNVT 829
ML + K G+ V VD D++G +
Sbjct: 790 MLRQPFKYGEQVYVDTDAEGKIV 812
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 62/79 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF R+TE+A +VI+LAQ+EARRL ++Y+G+EHLLLGL+REGEG+AA+ L++LG +R
Sbjct: 1 MFSRYTERAQRVIVLAQDEARRLNYDYVGTEHLLLGLIREGEGIAAKALQSLGIQLEQVR 60
Query: 151 TQVIRMVGESTEAVGAGVG 169
+V +M+G+ + + +G
Sbjct: 61 AEVEKMIGKGSASSRGEIG 79
>gi|407797861|ref|ZP_11144776.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
gi|407017624|gb|EKE30381.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
Length = 821
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/751 (57%), Positives = 573/751 (76%), Gaps = 17/751 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNK------MPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+++G EST G G G PTL+ +LT +A+EG +DPV+GR +I
Sbjct: 140 QLLGNNESTGGQGRRGGNQGGGAAQGSGQTTPTLDSLAQDLTSIAKEGNVDPVIGRSEEI 199
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
+RV+Q+L RRTKNNP L+GEPGVGKTA+AEGLAQ+I +VP+ + K+V+TLDMG +VA
Sbjct: 200 QRVIQVLSRRTKNNPVLVGEPGVGKTAVAEGLAQQIVENEVPEILRDKRVMTLDMGTVVA 259
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
GTKYRGEFE+RLKK+MEEI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARG+L
Sbjct: 260 GTKYRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGDL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
QCIGATTLDEYRK+IEKD ALERRFQP++V EP+ +E+ QIL+GLR+RYE HH++ TDE
Sbjct: 320 QCIGATTLDEYRKYIEKDAALERRFQPIQVDEPTTEESTQILQGLRDRYEAHHRVTITDE 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
A+ SA + S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE++L ++ KEK+
Sbjct: 380 AIESAVRFSDRYITDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQKLEEVRKEKDA 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
AV+ Q+FEKA LRD E L+ ++ K KE + G VT DI IVS W
Sbjct: 440 AVQSQEFEKAASLRDDEQKLREELEETQKKWKE------KQGQEDSEVTVEDIASIVSLW 493
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+PV+K++T+ES++LL +E+TLH RVIGQ+EAV ++++AIRRAR GLK+P RPI SFIF
Sbjct: 494 TGVPVKKMTTEESEQLLHLEDTLHNRVIGQEEAVDSVAKAIRRARAGLKDPKRPIGSFIF 553
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTGVGK+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLT
Sbjct: 554 LGPTGVGKTELARALAESMFGEEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLT 613
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VR++PY+VVL DE+EKAHPDVFN++LQ+LEDGRLTD KGR VDF+NT+LIMTSNVG+
Sbjct: 614 EKVRQKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDGKGRVVDFRNTVLIMTSNVGAQ 673
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
+ K + +GF + +D + +KS VTEELK+ FRPEFLNR+DE IVF L + +K
Sbjct: 674 EL-KENKYVGFSMGDQTQD--HKDMKSKVTEELKKAFRPEFLNRIDETIVFHALERKHMK 730
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
+I +M ++ RL ++I+ ++++ + EEG++P YGARPLRR++ + +ED ++E+
Sbjct: 731 DIVTLMADQLRTRLLEQEIDFTLSDKAISHIAEEGFDPEYGARPLRRSLQKNVEDLLSEE 790
Query: 807 MLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 837
+L I +G V++D+D + V +S A
Sbjct: 791 LLKESIHKGQKVVIDLDENNEFVVSTATSEA 821
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 54/68 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA RLGH+ IG+EH+LLGL++EGEG+AA+ L LG + I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAVRLGHSNIGTEHVLLGLVKEGEGIAAKALTALGLEAETIQ 61
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 62 TEVENLIG 69
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/750 (58%), Positives = 577/750 (76%), Gaps = 13/750 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG +YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + VG GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNVG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +E IQILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SRVRLR LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVELSTKYITDRYLPDKAIDLIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++EKA ++RD M L+ ++ + + + P+VTE DI +IVS+WTGIP
Sbjct: 441 QEYEKAAKIRDEIMKLRQELEKIKNSWT------NDQQKTQPIVTEDDIAYIVSSWTGIP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V +++ DES+RLLK+EE LH+RV+GQDEAVKA++RAIRR RVGLK+P RPI SFIF GPT
Sbjct: 495 VNRLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG+E+AMIR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE VR
Sbjct: 555 GVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+++I
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-T 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+++GF DEK +Y RIK V ELK+ FRPEFLNR+DE+IVF L + +VK+I +
Sbjct: 674 NPKKLGFSTSEDEKQRTYERIKENVMTELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVE 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK + +R+K + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 734 IMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEG 793
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
+IK+GD IVD DGN ++ + S
Sbjct: 794 KIKQGDEFIVDY-VDGNTVIIKKEKASTSS 822
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL++ G +
Sbjct: 1 MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKV 60
Query: 150 RTQVIRMVG 158
++ ++G
Sbjct: 61 IDEIEELIG 69
>gi|126653478|ref|ZP_01725571.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
gi|126589756|gb|EAZ83890.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
Length = 814
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/731 (60%), Positives = 569/731 (77%), Gaps = 11/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH+YIG+EHLLL L+REGEGVAARVL N G + R QV+
Sbjct: 81 YTPRAKKVIELSVDESRKLGHSYIGTEHLLLALIREGEGVAARVLNNAGVGLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G + A ++ PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 141 LLLGNNDNAQSGQQAAQAANT--PTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+V+E I I++GLR+RYE HH+++ TDEA+ +AA++
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKM 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+YISDRFLPDKAIDLIDEAGS+VRLR +P + LE +L + EKN AV GQ+FE
Sbjct: 379 GDRYISDRFLPDKAIDLIDEAGSKVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E LK +I A KE E G VT D+ +VS WTGIPV K+
Sbjct: 439 KAAALRDTEQKLKDEIEATRKNWKE------EQGKAESKVTVDDVAAVVSMWTGIPVAKI 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+++ES +LL++EE LHKRV+GQ EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 ASEESSKLLQLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY
Sbjct: 553 TELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K +
Sbjct: 613 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYQKS 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ DS +N +KS + EELK+ FRPEFLNR+DEMIVF L K +KEI +M
Sbjct: 672 LGFNVGG--ADSKHNDMKSTMLEELKKAFRPEFLNRIDEMIVFHSLEKEHLKEIIAMMGN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI L++T+ E++ +EGY+P YGARPLRRA+ + +ED ++E++L +++
Sbjct: 730 ALTKRLKEQDISLELTDAALEKIAQEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEK 789
Query: 815 GDSVIVDVDSD 825
G+ V++D +D
Sbjct: 790 GNHVVIDYVND 800
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ LAQEEA R H IG+EH+LLGL+REG G+AA+ LE + P I
Sbjct: 2 MFNRFTQRAQKVLQLAQEEAIRWKHESIGTEHILLGLIREGGGIAAKALEAIDISPQMIE 61
Query: 151 TQVIRMVGESTEAVG 165
+ +VG+ E VG
Sbjct: 62 AGIEELVGKGKEDVG 76
>gi|398309188|ref|ZP_10512662.1| genetic competence negative regulator ClpC/MecB [Bacillus
mojavensis RO-H-1]
Length = 810
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/736 (59%), Positives = 574/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PSVDE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G V+ DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKSWKE------KQGQENSEVSVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLAEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++TE + +V EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GHHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|312135577|ref|YP_004002915.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775628|gb|ADQ05115.1| ATPase AAA-2 domain protein [Caldicellulosiruptor owensensis OL]
Length = 829
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/750 (57%), Positives = 577/750 (76%), Gaps = 13/750 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG +YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + VG GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNVG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +E IQILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SRVRLR LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVELSTKYITDRYLPDKAIDLIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++EKA ++RD M L+ ++ + + + P+VTE DI +IVS+WTGIP
Sbjct: 441 QEYEKAAKIRDEIMKLRQELEKIKNSWT------NDQQKTQPIVTEDDIAYIVSSWTGIP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ DES+RLLK+EE LH+RV+GQDEAVKA++RAIRR RVGLK+P RPI SFIF GPT
Sbjct: 495 VNKLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG+E+A+IR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE VR
Sbjct: 555 GVGKTELARALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+++I
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-T 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+++GF DEK +Y RIK V ELK+ FRPEFLNR+DE+IVF L + +VK+I +
Sbjct: 674 NPKKLGFSTSEDEKQKTYERIKENVMNELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVE 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK + +R+K + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 734 IMLKNLQERIKASEYYAEFTPALVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEG 793
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
+IK+GD IVD +GN ++ + S
Sbjct: 794 KIKQGDEFIVDF-VEGNTVIIKKEKASTSS 822
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLG 143
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL++ G
Sbjct: 1 MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQG 54
>gi|418323135|ref|ZP_12934424.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
gi|365230228|gb|EHM71338.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
Length = 827
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/734 (57%), Positives = 565/734 (76%), Gaps = 13/734 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + G + N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG--SPDTGNKNTQANKSNNTPTLDSLARDLTVIAKDGTLDPVIGRNQEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNSEVPETLKNKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI + +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHHAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+VD+T++ILKGLR+RYE HH++ +DEAL +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVDDTVEILKGLRDRYEAHHRINISDEALEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P + +E+E+++ Q+ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPPDLKEIEQKIEQVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q +K K + A ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEANNKWKNAQNGDNTA------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES+RLL +E+TLHKRVIGQ EAV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESERLLNLEDTLHKRVIGQKEAVDSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDE+EKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEVEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L++ E+KEI +M+
Sbjct: 670 FAGFGGASENND--YETIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSQDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ DRL +DI ++VT+ + ++ EEGY+P YGARPL RAI + +ED+++E +LA
Sbjct: 728 NKLTDRLAEQDIVIKVTDAAKAKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILAGNQL 787
Query: 814 EGDSVIVDVDSDGN 827
EG VI +D DGN
Sbjct: 788 EGKDVI--IDHDGN 799
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 54/76 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL+RE EG+AA+VLE+ G +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMREPEGIAAKVLESFGITEDKVI 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G E +GA
Sbjct: 62 EEVEKLIGHGQEQMGA 77
>gi|314932748|ref|ZP_07840117.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
gi|313654429|gb|EFS18182.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
Length = 817
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/732 (57%), Positives = 563/732 (76%), Gaps = 11/732 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K G V ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYEEAKNEWK------NSQGGVSTALSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES RLL +E+TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESGRLLNLEDTLHNRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGND--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ DRL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 KKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSD 825
EG V +D D D
Sbjct: 788 EGKEVTIDHDGD 799
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/750 (58%), Positives = 576/750 (76%), Gaps = 13/750 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG +YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + VG GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNVG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +E IQILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SRVRLR LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVELSTKYITDRYLPDKAIDLIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++EKA ++RD M L+ D K + + P+VTE DI +IVS+WTGIP
Sbjct: 441 QEYEKAAKIRDEIMKLRQ------DLEKIKNSWTNDQQKTQPIVTEDDIAYIVSSWTGIP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V +++ DES+RLLK+EE LH+RV+GQDEAVKA++RAIRR RVGLK+P RPI SFIF GPT
Sbjct: 495 VNRLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG+E+AMIR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE VR
Sbjct: 555 GVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+++I
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-T 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+++GF DEK +Y RIK V ELK+ FRPEFLNR+DE+IVF L + +VK+I +
Sbjct: 674 NPKKLGFSTSEDEKQRTYERIKENVMTELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVE 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK + +R+K + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 734 IMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEG 793
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
+IK+GD IVD DGN ++ + S
Sbjct: 794 KIKQGDEFIVDY-VDGNTVIIKKEKASTSS 822
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL++ G +
Sbjct: 1 MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKV 60
Query: 150 RTQVIRMVG 158
++ ++G
Sbjct: 61 IDEIEELIG 69
>gi|308171976|ref|YP_003918681.1| class III stress response-like ATPase, AAA+ superfamily [Bacillus
amyloliquefaciens DSM 7]
gi|384157699|ref|YP_005539772.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|384162492|ref|YP_005543871.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|384166714|ref|YP_005548092.1| class III stress response-related ATPase [Bacillus
amyloliquefaciens XH7]
gi|307604840|emb|CBI41211.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens DSM 7]
gi|328551787|gb|AEB22279.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|328910047|gb|AEB61643.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|341825993|gb|AEK87244.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens XH7]
Length = 811
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/736 (60%), Positives = 575/736 (78%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 81 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S E +G G SS N PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 141 QLLG-SNETGTSGAGTNSSAN-TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPSVDE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G V+ DI +VS+WTG+PV K+
Sbjct: 439 KAASLRDTEQRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKI 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 613 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M
Sbjct: 672 VGFNV--QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLMSD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++TE + +V +EG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 730 QLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDK 789
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 790 GQHIVLDVE-DGEFVV 804
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH IG+EH+LLGL+REGEG+A + LE LG + ++
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQ 61
Query: 151 TQVIRMVG---ESTEAV 164
+V ++G EST +V
Sbjct: 62 KEVESLIGRGQESTTSV 78
>gi|440705221|ref|ZP_20886021.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
turgidiscabies Car8]
gi|440273037|gb|ELP61838.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
turgidiscabies Car8]
Length = 842
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/759 (57%), Positives = 584/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT---LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ AG GG + T L+++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKETAGASGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D+K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT++++ +I
Sbjct: 671 SK-GFNLGFAASGDKK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQVDILQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 VDLMVGKVDERLKDRDMGIELSQAAKELLSKKGYDPVMGARPLRRTIQREIEDTLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 FGELRPGHIVVVDTEGEGETATFTFRGEEKSALPDVPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 815
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/730 (62%), Positives = 575/730 (78%), Gaps = 10/730 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T + +V+ L+ EAR LGHNYIG+EHLLLGLLREGEGVAARVL +LG D R +VI
Sbjct: 82 YTPRTKRVMELSFYEARNLGHNYIGTEHLLLGLLREGEGVAARVLMDLGIDLQRARDEVI 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M+ E GA G P L+++G +LT+LA EGKLDPV+GR+ +IERV+QIL
Sbjct: 142 KMLKEEG---GAPQKGQPKNTNTPNLDQFGRDLTELAREGKLDPVIGREKEIERVIQILS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+IA G+VP+ ++ K+V+ LD+ +VAGTKYRGEF
Sbjct: 199 RRTKNNPCLIGEPGVGKTAIAEGLAQQIAEGNVPELLKDKRVVALDLPAMVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLK ++ E+K++ IILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IGATTL
Sbjct: 259 EERLKNVLNEVKKAGNIILFIDELHTVIGAGAAEGAIDASNILKPALARGEMQAIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKH+E DPALERRFQPV V EPS D+ + ILKGLR++YE +H++R TDEAL +A L
Sbjct: 319 DEYRKHVEGDPALERRFQPVVVGEPSRDDALLILKGLRDKYEAYHRVRITDEALEAAVDL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DR+LPDKAIDLIDEA +RV+LR P++ +ELE +L I KEK EAV QD+E
Sbjct: 379 SMRYITDRYLPDKAIDLIDEAAARVKLRTVTPPDDIKELEDKLEDIRKEKEEAVANQDYE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +LRD E LK +I L K S A T A VVT DI IVS+W+G+PV+++
Sbjct: 439 KAAKLRDDEQKLKEEIEKL--KESWSSNANTTAA----VVTAEDIAQIVSSWSGVPVKQL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLL +E+ LH+RVIGQDEAV+A+++AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 TEAESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E AM+R+DMSE+ME+++VS+LIGSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAEAMFGDENAMVRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEHVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
TVVLFDEIEKAHPDVFN++LQILEDGRLTD KGRTVDF+NT++IMTSN G+ +I K +
Sbjct: 613 TVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGRTVDFRNTVIIMTSNAGAHLITK-QKS 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF DE + Y +IK V EEL++ FRPEFLNR+DE+IVF L + ++ I D+MLK
Sbjct: 672 LGFSGGQDESKTEYEKIKDNVMEELRRTFRPEFLNRVDEIIVFHPLDEENLRAIVDLMLK 731
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+V RL K+I ++VT R+ + +EG++P YGARPLRRAI R++ED+++E++L I
Sbjct: 732 DVGKRLAEKNIYMEVTPAARDYLAKEGFDPIYGARPLRRAIQRMVEDNLSEELLKGTIAP 791
Query: 815 GDSVIVDVDS 824
GDSVI DV++
Sbjct: 792 GDSVIADVEN 801
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
A F RFTEKA K ++ AQEEAR LGHNY+G+EH+LLGLLRE +G+AA+VL N+GAD N+
Sbjct: 2 AFFGRFTEKAQKALIYAQEEARALGHNYVGTEHMLLGLLREEDGIAAKVLRNMGADIENV 61
Query: 150 RTQVIRMVGESTEAVGAGVG 169
R +V+ +VG+ G G
Sbjct: 62 RQEVVNLVGKGNFNFNEGFG 81
>gi|386841647|ref|YP_006246705.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101948|gb|AEY90832.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794942|gb|AGF64991.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 840
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 583/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETAAAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAAVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+MEE LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEEELHKRVIGQNDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAAAGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMISKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDAATFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/740 (58%), Positives = 573/740 (77%), Gaps = 12/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG +YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + VG GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNVG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +E IQILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SRVRLR LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVELSTKYITDRYLPDKAIDLIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++EKA ++RD M L+ ++ + + + P+VTE DI +IVS+WTGIP
Sbjct: 441 QEYEKAAKIRDEIMKLRQELEKIKNSWT------NDQQKTQPIVTEDDIAYIVSSWTGIP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ DES+RLLK+EE LH+RV+GQDEAVKA++RAIRR RVGLK+P RPI SFIF GPT
Sbjct: 495 VNKLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG+E+AMIR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE VR
Sbjct: 555 GVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+++I
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-T 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+++GF DEK +Y RIK V ELK+ FRPEFLNR+DE+IVF L + +VK+I +
Sbjct: 674 NPKKLGFSTSEDEKQKTYERIKENVMAELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIVE 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK + +R+K + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 734 IMLKNLQERIKASEYYAEFTPALIEAIAKKGFDPVFGARPLKRAIQTMVEDKISEAILEG 793
Query: 811 EIKEGDSVIVDVDSDGNVTV 830
+IK+GD IVD + V V
Sbjct: 794 KIKQGDEFIVDFVDENTVIV 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL + G +
Sbjct: 1 MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLHSQGVTEEKV 60
Query: 150 RTQVIRMVG 158
++ ++G
Sbjct: 61 IDEIEELIG 69
>gi|395769499|ref|ZP_10450014.1| Clp family ATP-binding protease [Streptomyces acidiscabies 84-104]
Length = 842
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/759 (57%), Positives = 584/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG---ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ +S E AG + + L+++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQQSKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I
Sbjct: 671 SK-GFNLGFAATGDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQADILQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 VDLMVGKVDERLKDRDMGIELSQASKELLSKKGYDPVLGARPLRRTIQREIEDTLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VDV+ +G +L D P+
Sbjct: 789 FGELRPGHIVVVDVEGEGETATFTFRGEEKSALPDVPPI 827
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|269128670|ref|YP_003302040.1| ATPase AAA-2 domain-containing protein [Thermomonospora curvata DSM
43183]
gi|268313628|gb|ACZ00003.1| ATPase AAA-2 domain protein [Thermomonospora curvata DSM 43183]
Length = 837
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/759 (57%), Positives = 583/759 (76%), Gaps = 15/759 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ T+ G S +L +++G NLT+ A EGKLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLHGYTQGKEPASTGPSESTPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP L+GEPGVGKTA+ EGLAQ+I G+VP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLVGEPGVGKTAVVEGLAQKIVKGEVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLSHTIEILKGLRDRYEAHHRVSITDGALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QL+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ Q+ +EK A+ QD
Sbjct: 380 QLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREYDEKIAQVRREKESAIDEQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIP 510
FEKA LRD+E L A K + E +AGD+ V VTE I +++ TGIP
Sbjct: 440 FEKAAALRDKEKQLLA--------AKAQREKEWKAGDMDVVAEVTEELIAEVLATATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ +E+ RLL+MEE LHKRVIGQ++A+KA+S++IRR R GLK+P RP SFIF+GP+
Sbjct: 492 VFKLTEEETSRLLRMEEELHKRVIGQEDAIKALSQSIRRTRAGLKDPKRPGGSFIFAGPS 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL+K LA + FG E+A+I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTELSKTLAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDEIEKAHPD+FN +LQILEDGRLTD++GRTVDFKNT++IMT+N+G+ I K
Sbjct: 612 RKPFSVVLFDEIEKAHPDIFNSLLQILEDGRLTDAQGRTVDFKNTIIIMTTNLGTRDISK 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G+ +GF D+ Y R+K+ V EELKQ+FRPEFLNR+D+++VF QLT E+ +I D
Sbjct: 672 -GQSLGF-ARPDDHVGDYERMKAKVQEELKQHFRPEFLNRVDDIVVFHQLTPKEIIQIVD 729
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+M+ V +RL+ +D+ +++ + ++ + E GY+P GARPLRR I R +EDS++EK+L
Sbjct: 730 LMIARVDERLRDRDMGIELKQEAKQLLAERGYDPVLGARPLRRTIQREIEDSLSEKILYG 789
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSS-GAPESLADPLPVV 848
E+K G V+V V+ G + P ++ D P V
Sbjct: 790 ELKPGQIVLVGVEGSGESAKFTFTGMPKPSTVPDTPPPV 828
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|255527257|ref|ZP_05394138.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296187235|ref|ZP_06855631.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
gi|255509042|gb|EET85401.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296048106|gb|EFG87544.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
Length = 812
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/738 (58%), Positives = 577/738 (78%), Gaps = 21/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ L+ EAR L HNYI EH+LL L+RE EGVA +L NLGAD +R ++
Sbjct: 81 LTPRTKRLLELSLFEARNLNHNYISPEHILLALIREAEGVAFTILNNLGADFDKLRKEL- 139
Query: 155 RMVGESTEAV-GAGVGGGSSGNK-----MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
TEA+ G G S NK PTL+++G +LT++A+EGKLDPVVGR + +R
Sbjct: 140 ------TEALSGEQTGNNSDFNKSNVEPTPTLDQFGRDLTEMAKEGKLDPVVGRDKETQR 193
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V++IL RRTKNNPCLIG+PGVGKTA+AEGLAQ+I G++P+ ++ K+V+TL++ +VAG+
Sbjct: 194 VLEILCRRTKNNPCLIGDPGVGKTAVAEGLAQKIVVGNIPELLKDKRVVTLELSSMVAGS 253
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERLKK+MEEI++S +ILFIDE+HT++GAGAAEGAIDA+NILKP+LARGE+QC
Sbjct: 254 KYRGEFEERLKKVMEEIRKSGNVILFIDEIHTIVGAGAAEGAIDASNILKPALARGEIQC 313
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATT+DEYRK+IEKD ALERRFQP+ V EP+ +E + ILKGLR++YE HH+++ TD+A+
Sbjct: 314 IGATTIDEYRKYIEKDSALERRFQPITVGEPNKEEAVLILKGLRDKYEAHHRVKITDDAI 373
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+A LS +YI+DRFLPDKAIDL+DEA S++R+ P + + E++L +ITKEK +++
Sbjct: 374 EAAVNLSDRYITDRFLPDKAIDLMDEAASKIRIESLVAPPDLKNSEEQLEKITKEKEDSI 433
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
R QDFEKA LRD+E +LK ++ L K K + E ++ VV+E +I +VS WT
Sbjct: 434 RVQDFEKAARLRDKEKELKDELEGL----KNNWKTKKEVSNL--VVSEKEIASVVSKWTN 487
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPVEK++ ES RLLK+EE LH RV+GQ+EAVK+ISRA+RRARVGLK+P RPI SFIF G
Sbjct: 488 IPVEKLTEKESQRLLKLEEILHNRVVGQNEAVKSISRAVRRARVGLKDPKRPIGSFIFLG 547
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+EL+KALA FG E MIR+DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLTE
Sbjct: 548 PTGVGKTELSKALAEAMFGDENNMIRVDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTEK 607
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR PY+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+T++FKNT++IMTSNVG+S I
Sbjct: 608 VRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNVGASTI 667
Query: 689 EKGGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+K + +GF L +EK++ Y ++K V EELK+ FRPEFLNR+D++IVF QL + ++
Sbjct: 668 KK-QKSMGFALGGKNEKENEYEKMKENVMEELKRSFRPEFLNRIDDIIVFHQLQEEDLNH 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I +MLK V RLK +DI ++ TE ++ + +EG++ +YGARPLRRAI +++ED ++E+M
Sbjct: 727 IVKLMLKTVDARLKEQDIYIEFTEEAQKNLAKEGFDLTYGARPLRRAITKIVEDKLSEEM 786
Query: 808 LAREIKEGDSVIVDVDSD 825
L IK+GD + V+V ++
Sbjct: 787 LRGNIKKGDKIKVEVKNN 804
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ AQEEA+ L H Y+G+EH+LLG+L+E +G+A ++L ++ ++R
Sbjct: 2 MFGRFTERAQKVLFYAQEEAQVLQHGYVGTEHILLGILKE-QGIAKQLLNDINITVDDVR 60
Query: 151 TQV 153
V
Sbjct: 61 DLV 63
>gi|339006576|ref|ZP_08639151.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|421875241|ref|ZP_16306835.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
gi|338775785|gb|EGP35313.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|372455709|emb|CCF16384.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
Length = 820
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/736 (58%), Positives = 580/736 (78%), Gaps = 10/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEG+AAR++ NLG + R QV+
Sbjct: 85 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGISLNKARQQVL 144
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S G ++ PTL+ +LT +A+EG LDPV+GRQ +IERV+Q+L
Sbjct: 145 QLLGSSEMMSSHQPSGSNASANTPTLDGLARDLTAIAKEGSLDPVIGRQKEIERVIQVLS 204
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 205 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVNNEIPETLRDKRVMTLDMGTVVAGTKYRGEF 264
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQC+GATTL
Sbjct: 265 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCVGATTL 324
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ ++ I+IL GLR+RYE HH+++ TDEA+ A ++
Sbjct: 325 DEYRKYIEKDAALERRFQPIQVDEPTPEDAIKILSGLRDRYEAHHRVKITDEAINQAVKM 384
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRL+ +P +ELE L ++ KEK+ AV+ Q+FE
Sbjct: 385 SDRYITDRFLPDKAIDLIDEAASKVRLQSFTVPPNLKELEARLEEVRKEKDAAVQSQEFE 444
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A LRD+E L+ ++ + KE G + VT+ DI H+V+ WTGIPV K+
Sbjct: 445 EAAALRDKEQKLREELDSTKKDWKERQ------GKLNMEVTQEDIAHVVANWTGIPVLKL 498
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLLKME+ LH RVIGQDEAVK+++RA+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 499 KEEETERLLKMEDILHDRVIGQDEAVKSVARAVRRARAGLKDPKRPIGSFIFLGPTGVGK 558
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+AMIR+DMSE+ME+HT ++L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 559 TELARAVAETLFGDEDAMIRVDMSEYMEKHTTARLVGAPPGYVGYDEGGQLTEKVRRKPY 618
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG+S+I+K
Sbjct: 619 SVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGASMIKKNS-S 677
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + EK Y +K V +ELK+ FRPEFLNR+DE+IVF L + +++I +M +
Sbjct: 678 LGFTTNDSEK--KYQDMKDKVMDELKRSFRPEFLNRIDEIIVFHSLEQEHIEKIVTLMTE 735
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL ++I+ +++E ++ + +EG++P+YGARPLRRAI R +ED ++E++L I +
Sbjct: 736 DLRKRLVEQEIDFKLSEEAKKILAKEGFDPAYGARPLRRAIQRNIEDRLSEELLKGTITK 795
Query: 815 GDSVIVDVDSDGNVTV 830
GD+V +D + DG +TV
Sbjct: 796 GDTVQIDAE-DGKLTV 810
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LA EEA RLGH IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALALEEAVRLGHKDIGTEHVLLGLIREGEGIAAKALQALGLGLDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G + E
Sbjct: 62 NEVESLIGRAPE 73
>gi|443635019|ref|ZP_21119190.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345210|gb|ELS59276.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 810
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/736 (59%), Positives = 573/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++TE + +V EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/750 (58%), Positives = 577/750 (76%), Gaps = 13/750 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG +YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + VG GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNVG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +E IQILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DR+LPDKAIDLIDEA SRVRLR LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVELSTKYITDRYLPDKAIDLIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++EKA ++RD M L+ ++ + + + P+VTE DI +IVS+WTGIP
Sbjct: 441 QEYEKAAKIRDEIMKLRQELEKIKNSWT------NDQQKTQPIVTEDDIAYIVSSWTGIP 494
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ DES+RLLK+EE LH+RV+GQDEAVKA++RAIRR RVGLK+P RPI SFIF GPT
Sbjct: 495 VNKLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPT 554
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG+E+AMIR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE VR
Sbjct: 555 GVGKTELARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVR 614
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+++I
Sbjct: 615 RRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGANLI-T 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+++GF DEK +Y +IK V ELK+ FRPEFLNR+DE+IVF L + +VK+I +
Sbjct: 674 NPKKLGFSTSEDEKQRTYEQIKENVMGELKKTFRPEFLNRIDEIIVFHPLDEDDVKKIVE 733
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK + +R+K + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 734 IMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEG 793
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
+IK+GD IVD DGN ++ + S
Sbjct: 794 KIKQGDEFIVDY-VDGNTVIVKKEKASTSS 822
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL + G +
Sbjct: 1 MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLHSQGVTEEKV 60
Query: 150 RTQVIRMVG 158
++ ++G
Sbjct: 61 IDEIEELIG 69
>gi|73663540|ref|YP_302321.1| stress response-related Clp ATPase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|122063325|sp|Q49V34.1|CLPC_STAS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|72496055|dbj|BAE19376.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 820
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/730 (58%), Positives = 564/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEALVSAA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+++ Q+ EK+ AV Q+F
Sbjct: 377 LSHRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q K T+ GD ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEANTNWK-----NTQNGD-NTSLSEEDIGEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHNRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+K+I +M+
Sbjct: 670 FAGFGGATEGQD--YESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL +DI + VTE +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQDINISVTEAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V +D D
Sbjct: 788 EGKEVKIDHD 797
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLETFEITEEKVV 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G E +GA
Sbjct: 62 EEVEKLIGHGQEQMGA 77
>gi|329939478|ref|ZP_08288814.1| Clp-family ATP-binding protease [Streptomyces griseoaurantiacus
M045]
gi|329301707|gb|EGG45601.1| Clp-family ATP-binding protease [Streptomyces griseoaurantiacus
M045]
Length = 841
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/758 (58%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGDLIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAAQGDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQQDILAIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+++V +RLK +D+ L++++ +E + +GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMIEKVDERLKDRDMGLELSQSAKELLSRKGYDPVLGARPLRRTIQREVEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDTATFTFRGEEKAALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|153952834|ref|YP_001393599.1| protein ClpC [Clostridium kluyveri DSM 555]
gi|146345715|gb|EDK32251.1| ClpC [Clostridium kluyveri DSM 555]
Length = 812
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/730 (58%), Positives = 569/730 (77%), Gaps = 11/730 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ L+ EAR L HNYI EH+LL L+RE EGVA +L NLGAD + +R Q+I
Sbjct: 81 LTPRTKRLLELSLFEARNLNHNYISPEHILLALIREAEGVAFTILNNLGADFNKLRKQLI 140
Query: 155 -RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+ GE ++V + +G PTL+++G +LT +A EGKLDPV+GR+ + +RV++IL
Sbjct: 141 DSLSGE--QSVSSNNSKKENGEPTPTLDQFGRDLTDMAREGKLDPVIGREKETQRVLEIL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNPCLIG+PGVGKTAIAEGLA++I + ++P+ ++GK+V+TLD+ ++AG+KYRGE
Sbjct: 199 SRRTKNNPCLIGDPGVGKTAIAEGLAEKIVAANIPELLKGKRVVTLDLSSMIAGSKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI++S +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT
Sbjct: 259 FEERLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
+DEYRK+IEKD ALERRFQP+ V EP+ +E + ILKGLR++YE HH+++ TDEA+ +A
Sbjct: 319 IDEYRKYIEKDAALERRFQPILVGEPTKEEAVLILKGLRDKYEAHHRVKITDEAIEAAVN 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DR+LPDKAIDLIDEA ++VR+++ P + + LE EL + TKEK +++R QDF
Sbjct: 379 LSDRYITDRYLPDKAIDLIDEAAAKVRIQNLIAPPDLKNLEVELEKATKEKEDSIRLQDF 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA +LRD E +LK ++ L K + T +V E I +VS WT +PVEK
Sbjct: 439 EKAAKLRDIEKELKDKLEGLKTNWKTKKEVST------LLVGEEKIASVVSQWTNVPVEK 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E RLLK+E+ LHKRVIGQDEAVK+I+RA+RR+RVGLK+P RPI SFIF GPTGVG
Sbjct: 493 LTEKELQRLLKLEDILHKRVIGQDEAVKSIARAVRRSRVGLKDPKRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL+KALA FG E +IR+DMSE+ME+HTVSKLIGSPPGYVGY EGGQLTE VRR P
Sbjct: 553 KTELSKALAEAMFGDENNLIRIDMSEYMEKHTVSKLIGSPPGYVGYDEGGQLTEKVRRNP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+T++FKNT++IMTSNVG S I+K +
Sbjct: 613 YSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNVGVSTIKK-QK 671
Query: 694 RIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF + D EK Y+++K + EELK FRPEFLNR+D++IVF QL + ++K+I IM
Sbjct: 672 SMGFTIVSDNEKQDEYDKMKDNIMEELKTSFRPEFLNRIDDIIVFHQLQEDDLKQIVKIM 731
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
L +V RLK KDI++ E+ +E + +EG++ +YGARPLRRAI + +ED ++E+ML +
Sbjct: 732 LNDVSMRLKEKDIDINFNEKAQELLAKEGFDITYGARPLRRAITKTVEDKLSEEMLKGNV 791
Query: 813 KEGDSVIVDV 822
K GD V V V
Sbjct: 792 KRGDKVEVAV 801
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV++ AQEEA+ L H Y+G+EH+LLG+L+E +G+A L N+ NI
Sbjct: 2 MFGRFTERAQKVLIYAQEEAQALQHGYVGTEHILLGVLKE-DGIAKNFLNNM-----NIT 55
Query: 151 TQVIRMVGESTEAVG 165
+ +R E E G
Sbjct: 56 IETVRSFIEEYEGRG 70
>gi|169830065|ref|YP_001700223.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
gi|168994553|gb|ACA42093.1| Negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
Length = 813
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/731 (60%), Positives = 568/731 (77%), Gaps = 11/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH+YIG+EHLLL L+REGEGVAARVL N G + R QV+
Sbjct: 80 YTPRAKKVIELSVDESRKLGHSYIGTEHLLLALIREGEGVAARVLNNAGVGLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G + A ++ PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 140 LLLGNNDNAQSGQQAAQAANT--PTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+V+E I I++GLR+RYE HH+++ TDEA+ +AA++
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDEPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKM 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+YISDRFLPDKAIDLIDEAGS+VRLR +P + LE +L + EKN AV GQ+FE
Sbjct: 378 GDRYISDRFLPDKAIDLIDEAGSKVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E LK +I A KE E G VT D+ +VS WTGIPV K+
Sbjct: 438 KAAALRDTEQKLKDEIEATRKNWKE------EQGKAESKVTVDDVAAVVSMWTGIPVAKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+++ES +LL++EE LHKRV+GQ EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 ASEESSKLLQLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY
Sbjct: 552 TELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYQKS 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ DS + +KS + EELK+ FRPEFLNR+DEMIVF L K +KEI +M
Sbjct: 671 LGFNVGG--ADSKHKDMKSTMLEELKKAFRPEFLNRIDEMIVFHSLEKEHLKEIIAMMGN 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI L++T+ E++ +EGY+P YGARPLRRA+ + +ED ++E++L +++
Sbjct: 729 ALTKRLKEQDISLELTDAALEKIAQEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEK 788
Query: 815 GDSVIVDVDSD 825
G+ VI+D +D
Sbjct: 789 GNHVIIDYVND 799
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ LAQEEA R H IG+EH+LLGL+REG G+AA+ LE + P I
Sbjct: 1 MFNRFTQRAQKVLQLAQEEAIRWKHESIGTEHILLGLIREGGGIAAKALEAIDISPQMIE 60
Query: 151 TQVIRMVGESTEAVG 165
+ +VG+ E VG
Sbjct: 61 AGIEELVGKGKEDVG 75
>gi|379058467|ref|ZP_09848993.1| Clp-family ATP-binding protease [Serinicoccus profundi MCCC
1A05965]
Length = 841
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/769 (58%), Positives = 582/769 (75%), Gaps = 28/769 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E +LGHNYIG+EHLLLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQLGHNYIGTEHLLLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSS--GNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
++ + EA AGVG GS G + +L +++G NLT+ A EGKLDPV+GR+P+IER
Sbjct: 140 TLLSGYQGKEAATAGVGAGSQQEGQQAGSLVLDQFGRNLTQAAREGKLDPVIGREPEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKEKQLYTLDLGALVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRKHIEKD ALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKHIEKDAALERRFQPIQVAEPTLKHAIEILKGLRDRYEAHHRVTITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
++AA ++ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 IAAATMADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHAKREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD E L A ++ KE + + VV EVD I +++A
Sbjct: 440 DAQDFEKAARLRDEEHKL---TQARAEREKEWKNGDMD------VVAEVDEELIAEVLAA 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K+S +ES RLL ME+ LHKR+IG D+A+K +S+AIRR R GLK+P RP SFI
Sbjct: 491 ATGIPVFKLSEEESSRLLNMEQELHKRIIGMDDAIKGLSQAIRRTRAGLKDPRRPGGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+++I LDMSE+ E+HTVS++ GSPPGYVGY EGGQL
Sbjct: 551 FAGPTGVGKTELAKALAEFLFGDEDSLITLDMSEYSEKHTVSRMFGSPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G +GF D + SSY R+K+ VT+ELKQ+FRPEFLNR+D+ IVF QL++ E+
Sbjct: 671 RDIAK-GVSLGFSAGPDTQ-SSYERMKNKVTDELKQHFRPEFLNRVDDTIVFPQLSQSEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+I D+M+ + +RLK KD+ +++T +E + + GY+P GARPLRRAI R +ED ++E
Sbjct: 729 VQIVDLMIARLDERLKDKDMAIELTSSAKELLAKRGYDPVLGARPLRRAIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDV-DSDGN------VTVLNGSSGAPESLADPLPV 847
K+L E+ G VIVDV D GN V G P + D +PV
Sbjct: 789 KILFGELGTGQIVIVDVEDPVGNDKNRDKVFTFRGQQ-KPAEVPDTVPV 836
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGVAAKALESLDISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ ++
Sbjct: 61 QQVQEIIGQGQQS 73
>gi|70727483|ref|YP_254399.1| endopeptidase Clp ATP-binding subunit C [Staphylococcus
haemolyticus JCSC1435]
gi|122063324|sp|Q4L3I4.1|CLPC_STAHJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|68448209|dbj|BAE05793.1| endopeptidas Clp ATP-binding chain C [Staphylococcus haemolyticus
JCSC1435]
Length = 824
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/732 (58%), Positives = 563/732 (76%), Gaps = 11/732 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNATANKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++TI ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDCYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K T GD +++ DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEDAKNEWK------TTQGDQSTSLSKEDIGEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ EGGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGGSEGHD--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSD 825
EG V++D D D
Sbjct: 788 EGKEVVIDHDGD 799
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + G
Sbjct: 62 EEVEKLIGHGQDQTG 76
>gi|383651370|ref|ZP_09961776.1| ATP-dependent Clp protease [Streptomyces chartreusis NRRL 12338]
Length = 841
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 581/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQNDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAASGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQDDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++ + +E + ++GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMISKVDERLKDRDMGIELAQSAKELLAKKGYDPVMGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGETKTFTFRGEEKSALPDVPPI 826
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|299541899|ref|ZP_07052222.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|424739339|ref|ZP_18167758.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
gi|298725637|gb|EFI66278.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|422946736|gb|EKU41142.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
Length = 814
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/731 (60%), Positives = 568/731 (77%), Gaps = 11/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH+YIG+EHLLL L+REGEGVAARVL N G + R QV+
Sbjct: 81 YTPRAKKVIELSVDESRKLGHSYIGTEHLLLALIREGEGVAARVLNNAGVGLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G + A ++ PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 141 LLLGNNDNAQSGQQAAQAANT--PTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+V+E I I++GLR+RYE HH+++ TDEA+ +AA++
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKM 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR +P + LE +L + EKN AV GQ+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E LK +I A KE E G VT D+ +VS WTGIPV K+
Sbjct: 439 KAAALRDTEQKLKDEIEATRKNWKE------EQGKAESKVTVDDVAAVVSMWTGIPVAKI 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+++ES +LL++EE LHKRV+GQ EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 ASEESSKLLQLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVG+ +GGQLTE VRR+PY
Sbjct: 553 TELARALAEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VDF+NT++IMTSNVG+ + K +
Sbjct: 613 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNVGADAL-KYQKN 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ E S + +K + EELK+ FRPEFLNR+DEMIVF L K +KEI +M
Sbjct: 672 LGFNVGGAE--SKHKDMKGTMLEELKKAFRPEFLNRIDEMIVFHALEKEHLKEIIAMMGN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK +DI L++T+ E++ EEGY+P YGARPLRRA+ + +ED ++E++L +++
Sbjct: 730 ALTKRLKEQDISLELTDAALEKIAEEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEK 789
Query: 815 GDSVIVDVDSD 825
G+ V++D +D
Sbjct: 790 GNQVVIDYVND 800
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ LAQEEA R H IG+EH+LLGL+REG G+AA+ LE + P I
Sbjct: 2 MFNRFTQRAQKVLQLAQEEAIRWKHESIGTEHILLGLIREGGGIAAKALEAIDISPQMIE 61
Query: 151 TQVIRMVGESTEAVG 165
+ +VG+ E VG
Sbjct: 62 AGIEELVGKGKEDVG 76
>gi|403047553|ref|ZP_10903021.1| stress response-related Clp ATPase [Staphylococcus sp. OJ82]
gi|402763087|gb|EJX17181.1| stress response-related Clp ATPase [Staphylococcus sp. OJ82]
Length = 820
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/733 (57%), Positives = 564/733 (76%), Gaps = 13/733 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG-SPELSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++GK+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQSIIKNEVPETLKGKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ ++ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGDVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEA++SAA
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEAVISAAT 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++Y+SDRFLPDKAIDLIDEA S+VRLR P +ELE+E+ Q+ EK+ AV Q+F
Sbjct: 377 LSHRYVSDRFLPDKAIDLIDEASSKVRLRSHTTPPNLKELEQEIEQVKNEKDAAVHSQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q + K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEANNNWKNAQNGDNTS------LSEEDIGEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHNRVIGQKAAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I++ + +ELK FRPEFLNR+D+ IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGQD--YETIRNTMMKELKNAFRPEFLNRVDDTIVFHKLSKEELKEIVTMMI 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ DRL +DI ++VT+ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTDRLSEQDINIEVTDAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSDG 826
EG V++D DG
Sbjct: 788 EGKK--VEIDHDG 798
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFEITEEKVV 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G E +GA
Sbjct: 62 EEVEKLIGHGQEQMGA 77
>gi|219853499|ref|YP_002470621.1| hypothetical protein CKR_0156 [Clostridium kluyveri NBRC 12016]
gi|219567223|dbj|BAH05207.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 816
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/730 (58%), Positives = 569/730 (77%), Gaps = 11/730 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ L+ EAR L HNYI EH+LL L+RE EGVA +L NLGAD + +R Q+I
Sbjct: 85 LTPRTKRLLELSLFEARNLNHNYISPEHILLALIREAEGVAFTILNNLGADFNKLRKQLI 144
Query: 155 -RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+ GE ++V + +G PTL+++G +LT +A EGKLDPV+GR+ + +RV++IL
Sbjct: 145 DSLSGE--QSVSSNNSKKENGEPTPTLDQFGRDLTDMAREGKLDPVIGREKETQRVLEIL 202
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNPCLIG+PGVGKTAIAEGLA++I + ++P+ ++GK+V+TLD+ ++AG+KYRGE
Sbjct: 203 SRRTKNNPCLIGDPGVGKTAIAEGLAEKIVAANIPELLKGKRVVTLDLSSMIAGSKYRGE 262
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI++S +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT
Sbjct: 263 FEERLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATT 322
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
+DEYRK+IEKD ALERRFQP+ V EP+ +E + ILKGLR++YE HH+++ TDEA+ +A
Sbjct: 323 IDEYRKYIEKDAALERRFQPILVGEPTKEEAVLILKGLRDKYEAHHRVKITDEAIEAAVN 382
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DR+LPDKAIDLIDEA ++VR+++ P + + LE EL + TKEK +++R QDF
Sbjct: 383 LSDRYITDRYLPDKAIDLIDEAAAKVRIQNLIAPPDLKNLEVELEKATKEKEDSIRLQDF 442
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA +LRD E +LK ++ L K + T +V E I +VS WT +PVEK
Sbjct: 443 EKAAKLRDIEKELKDKLEGLKTNWKTKKEVST------LLVGEEKIASVVSQWTNVPVEK 496
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E RLLK+E+ LHKRVIGQDEAVK+I+RA+RR+RVGLK+P RPI SFIF GPTGVG
Sbjct: 497 LTEKELQRLLKLEDILHKRVIGQDEAVKSIARAVRRSRVGLKDPKRPIGSFIFLGPTGVG 556
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL+KALA FG E +IR+DMSE+ME+HTVSKLIGSPPGYVGY EGGQLTE VRR P
Sbjct: 557 KTELSKALAEAMFGDENNLIRIDMSEYMEKHTVSKLIGSPPGYVGYDEGGQLTEKVRRNP 616
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+T++FKNT++IMTSNVG S I+K +
Sbjct: 617 YSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNVGVSTIKK-QK 675
Query: 694 RIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF + D EK Y+++K + EELK FRPEFLNR+D++IVF QL + ++K+I IM
Sbjct: 676 SMGFTIVSDNEKQDEYDKMKDNIMEELKTSFRPEFLNRIDDIIVFHQLQEDDLKQIVKIM 735
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
L +V RLK KDI++ E+ +E + +EG++ +YGARPLRRAI + +ED ++E+ML +
Sbjct: 736 LNDVSMRLKEKDIDINFNEKAQELLAKEGFDITYGARPLRRAITKTVEDKLSEEMLKGNV 795
Query: 813 KEGDSVIVDV 822
K GD V V V
Sbjct: 796 KRGDKVEVAV 805
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV++ AQEEA+ L H Y+G+EH+LLG+L+E +G+A L N+ NI
Sbjct: 6 MFGRFTERAQKVLIYAQEEAQALQHGYVGTEHILLGVLKE-DGIAKNFLNNM-----NIT 59
Query: 151 TQVIRMVGESTEAVG 165
+ +R E E G
Sbjct: 60 IETVRSFIEEYEGRG 74
>gi|302553198|ref|ZP_07305540.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302470816|gb|EFL33909.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 841
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/758 (58%), Positives = 581/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETAAAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAAQGDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQDDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMISKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGETKTFTFRGEEKAALPDAPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|455652535|gb|EMF31161.1| Clp-family ATP-binding protease [Streptomyces gancidicus BKS 13-15]
Length = 841
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/758 (58%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+MEE LHKRVIGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEEELHKRVIGQDDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAAAGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQGDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIGKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGESQTFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|52145135|ref|YP_081693.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus E33L]
gi|51978604|gb|AAU20154.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus E33L]
Length = 811
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/734 (59%), Positives = 574/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G TE
Sbjct: 62 KEVEALIGRGTE 73
>gi|21221802|ref|NP_627581.1| Clp-family ATP-binding protease [Streptomyces coelicolor A3(2)]
gi|289770914|ref|ZP_06530292.1| Clp-family ATP-binding protease [Streptomyces lividans TK24]
gi|4585605|emb|CAB40873.1| putative Clp-family ATP-binding protease [Streptomyces coelicolor
A3(2)]
gi|289701113|gb|EFD68542.1| Clp-family ATP-binding protease [Streptomyces lividans TK24]
Length = 841
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++ ++ +I
Sbjct: 671 K-GFNLGFAAAGDTK-SNYERMKNKVQDELKQHFRPEFLNRVDDVVVFPQLSQDDILQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+++V +RLK +D+ +++++ +E + + GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIQKVDERLKDRDMGIELSQSAKELLSKRGYDPVLGARPLRRTIQREVEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDAATFTFRGEEKSTLPDVPPI 826
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|418476245|ref|ZP_13045570.1| Clp-family ATP-binding protease [Streptomyces coelicoflavus ZG0656]
gi|371543153|gb|EHN71987.1| Clp-family ATP-binding protease [Streptomyces coelicoflavus ZG0656]
Length = 841
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++ ++ +I
Sbjct: 671 K-GFNLGFAAAGDTK-SNYERMKNKVQDELKQHFRPEFLNRVDDVVVFPQLSQDDILQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+++V +RLK +D+ +++++ +E + + GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIQKVDERLKDRDMGIELSQSAKELLSKRGYDPVLGARPLRRTIQREVEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDTATFTFRGEEKSTLPDVPPI 826
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|374294995|ref|YP_005045186.1| chaperone ATPase [Clostridium clariflavum DSM 19732]
gi|359824489|gb|AEV67262.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
clariflavum DSM 19732]
Length = 810
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/727 (58%), Positives = 568/727 (78%), Gaps = 7/727 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ L+ EARR+GHNYIG+EHLL+G+L+EGE VA R+L +LG +P + ++V+
Sbjct: 80 FTPRTKRVLELSFREARRMGHNYIGTEHLLIGILKEGESVAVRILMDLGLEPQKLYSEVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M E S+ + PTL ++G +LT++A E K DPV+GR +IERV+QIL
Sbjct: 140 KMFTEEAPGAAGVPKNHSASSNTPTLNQFGRDLTEMAREAKFDPVIGRDKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ ++ K+V+TLD+ +VAG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILKDKRVVTLDLSSMVAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK +EEIK++ +ILFIDE+HT+IGAGAAEGAIDA+NILKPSLARGE+Q IGATTL
Sbjct: 260 EERLKKALEEIKKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEIQVIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKH+EKD ALERRFQP+ V EP+V+E I+ILKG+R++YE HH+++ TDEALV+A +L
Sbjct: 320 DEYRKHVEKDAALERRFQPIIVGEPTVEEAIEILKGIRDKYEAHHRVKITDEALVAAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P ++LE+++ ++ KEK +++ Q+FE
Sbjct: 380 SDRYITDRFLPDKAIDLIDEAASKVRLRSFTAPPNLKQLEEQVERLRKEKEDSIICQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD E LK ++ + ++ ++ T VTE ++ IV+ WTGIPV+++
Sbjct: 440 KAARIRDEEQRLKNELEKAKNDWQQKNQTTTNT------VTEEEVAGIVADWTGIPVKRL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RL+KMEE LH RVIGQ+EAVKA+S+AIRR RVGLK+P RP+ SFIF GPTGVGK
Sbjct: 494 AEEESERLMKMEEILHNRVIGQEEAVKAVSKAIRRGRVGLKDPKRPVGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E A+IR+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 554 TELSKALAEALFGDENAIIRIDMSEYMEKHSVSRLVGSPPGYVGYEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQILEDGRLTDS+GR VDFKNT++IMTSNVG+ +I + +R
Sbjct: 614 SVVLFDEIEKAHPDVFNLLLQILEDGRLTDSQGRVVDFKNTVIIMTSNVGARLITE-PKR 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF +K +YN +K+ V ELK FRPEFLNR+DE+IVF L + +K I +M+
Sbjct: 673 LGFASANVDKAKNYNDMKNNVMGELKNTFRPEFLNRVDEIIVFHPLEEEHLKRIVGLMID 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK IEL+VTE + + ++G++ YGARPLRRAI ++ED +AE+ML +K
Sbjct: 733 NLAKRLKENAIELEVTEDAKLLLAKKGFDQVYGARPLRRAIQSMVEDKLAEEMLEGRVKA 792
Query: 815 GDSVIVD 821
GD V+++
Sbjct: 793 GDKVVIE 799
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFTEKA + + L+QE A LGHNY+G+EHLLLGL++EG GVAA+VL+N G +
Sbjct: 1 MYGRFTEKAERAVNLSQESAMALGHNYVGTEHLLLGLIKEGSGVAAKVLQNQGITEEKVL 60
Query: 151 TQVIRMVG 158
++ ++G
Sbjct: 61 KEIEELIG 68
>gi|425738218|ref|ZP_18856484.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
massiliensis S46]
gi|425480228|gb|EKU47396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
massiliensis S46]
Length = 815
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/731 (58%), Positives = 566/731 (77%), Gaps = 11/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVV 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ +G + + + S GN PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 140 KALG--SPEMNSKSQTVSKGNNTPTLDSLARDLTVIAKDGTLDPVVGRNKEITRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ I S +VP+T++GK+V++LDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQAIVSNEVPETLKGKRVMSLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK+MEEI Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EERLKKVMEEIHQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQPV+V EP+V +TI+IL+GLR+RYE HH++ +DEAL +AA+L
Sbjct: 318 DEYRKHIEKDAALERRFQPVQVDEPTVPDTIRILEGLRDRYEAHHRINISDEALAAAAKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEA S+VRL+ P +ELE+++ ++ EK+ AV Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLVDEASSKVRLKSHTTPTNLKELEQQIEKVKSEKDAAVHSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A LRD++ L+ Q ++ ++ + G + E DI +V+ WTGIP+ K+
Sbjct: 438 NAANLRDQQTKLEKQYETAKNEWRK------DQGGQNTTLVEEDIAEVVAGWTGIPLTKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 NETESERLLNLEDTLHERVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+PY
Sbjct: 552 TELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 612 SVVLFDEIEKAHPEVFNILLQVLDDGHLTDTKGRKVDFRNTVIIMTSNVGAQELQD-QRF 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
GF ++ + Y I+ + +ELK FRPEFLNR+D++IVF +L K E+KEI +M+
Sbjct: 671 AGF--GGSDQTNDYETIRKTMLKELKNAFRPEFLNRVDDIIVFHRLEKEELKEIVTMMVN 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL ++I +QVT++ ++R+ EEGY+P YGARPL RAI + +ED+++E +L E
Sbjct: 729 KLTKRLDEQNIHIQVTDKAKDRIAEEGYDPEYGARPLIRAIQKAIEDNLSELILDGRNIE 788
Query: 815 GDSVIVDVDSD 825
G +V VD D D
Sbjct: 789 GKAVTVDYDGD 799
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E +G+AA+VL++ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEQDGIAAKVLQSFDITEEKVT 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + +G
Sbjct: 62 EEVEKLIGHGQDQMG 76
>gi|384173746|ref|YP_005555131.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|386756665|ref|YP_006229881.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|428277501|ref|YP_005559236.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|430755612|ref|YP_007211173.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449092799|ref|YP_007425290.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
gi|291482458|dbj|BAI83533.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|349592970|gb|AEP89157.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|384929947|gb|AFI26625.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|430020132|gb|AGA20738.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449026714|gb|AGE61953.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
Length = 810
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/736 (59%), Positives = 574/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|443625395|ref|ZP_21109840.1| putative ATP-dependent Clp protease [Streptomyces viridochromogenes
Tue57]
gi|443341108|gb|ELS55305.1| putative ATP-dependent Clp protease [Streptomyces viridochromogenes
Tue57]
Length = 841
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETAAAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQNDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAASGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQGDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIGKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGEAKTFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|16077154|ref|NP_387967.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307897|ref|ZP_03589744.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312218|ref|ZP_03594023.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317152|ref|ZP_03598446.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321415|ref|ZP_03602709.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402774329|ref|YP_006628273.1| class III stress response-related ATPase [Bacillus subtilis QB928]
gi|418034764|ref|ZP_12673233.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|452916619|ref|ZP_21965241.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
gi|586900|sp|P37571.1|CLPC_BACSU RecName: Full=Negative regulator of genetic competence ClpC/MecB
gi|442360|gb|AAA19233.1| ClpC adenosine triphosphatase [Bacillus subtilis]
gi|467474|dbj|BAA05320.1| clpA/clpB family [Bacillus subtilis]
gi|2632353|emb|CAB11862.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis subsp. subtilis str. 168]
gi|351468418|gb|EHA28638.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|402479515|gb|AFQ56024.1| Class III stress response-related ATPase, AAA+superfamily [Bacillus
subtilis QB928]
gi|407955777|dbj|BAM49017.1| class III stress response-related ATPase [Bacillus subtilis
BEST7613]
gi|407963048|dbj|BAM56287.1| class III stress response-related ATPase [Bacillus subtilis
BEST7003]
gi|452114528|gb|EME04928.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
Length = 810
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/736 (59%), Positives = 574/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|291438069|ref|ZP_06577459.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
gi|291340964|gb|EFE67920.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
Length = 841
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/758 (58%), Positives = 581/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQD+AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQDDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAAAGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQNDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + +GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIDKVDERLKDRDMGIELSQSAKELLSRKGYDPVLGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGESQTFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|421733018|ref|ZP_16172133.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407073059|gb|EKE46057.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 811
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/738 (59%), Positives = 573/738 (77%), Gaps = 16/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 81 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 141 QLLG--SNETGSSASGANSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G V+ DI +VS+WTG+PV K+
Sbjct: 439 KAASLRDTEQRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKI 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 613 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 671
Query: 695 IGFDLDYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF++ +D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M
Sbjct: 672 VGFNV----QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLM 727
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I
Sbjct: 728 SDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNI 787
Query: 813 KEGDSVIVDVDSDGNVTV 830
+G +++DV+ DG V
Sbjct: 788 DKGQHIVLDVE-DGEFVV 804
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH IG+EH+LLGL+REGEG+A + LE LG + ++
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G E+
Sbjct: 62 KEVESLIGRGQES 74
>gi|345852637|ref|ZP_08805570.1| ATP-dependent Clp protease [Streptomyces zinciresistens K42]
gi|345635897|gb|EGX57471.1| ATP-dependent Clp protease [Streptomyces zinciresistens K42]
Length = 841
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 583/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAASGDTK-SNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQDDILKIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMVGKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDTKTFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|384177987|ref|YP_005563749.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324324071|gb|ADY19331.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 811
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/734 (59%), Positives = 574/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDEGRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|229083400|ref|ZP_04215749.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
gi|228699909|gb|EEL52545.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
Length = 811
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/734 (59%), Positives = 576/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A EG+LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEATSGHQGGASANANTPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETNKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDEGRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL++T + E + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELELTSKAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G V+ D + + V
Sbjct: 790 GQKVVFDAEGESFV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G TE
Sbjct: 62 KEVEALIGRGTE 73
>gi|321313756|ref|YP_004206043.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
gi|320020030|gb|ADV95016.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
Length = 810
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/736 (59%), Positives = 573/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+AEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAVAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PSVDE+IQIL+GLR+RYE HH++ TD+A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE E VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKSWKEKQGQENSE------VTVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EE+MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|408530234|emb|CCK28408.1| putative ATP-dependent Clp protease ATP-binding subunit
[Streptomyces davawensis JCM 4913]
Length = 841
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGDLIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQTDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAASGDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILAIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIGKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGETQTFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|29831240|ref|NP_825874.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|29608355|dbj|BAC72409.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 841
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/758 (57%), Positives = 579/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETAAAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAAQGDTK-SNYERMKNKVADELKQHFRPEFLNRVDDVVVFPQLTQDDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++ + +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMITKVDERLKDRDMGIELAQSAKELLAKKGYDPVLGARPLRRTIQREIEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGETKTFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|296333083|ref|ZP_06875537.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305672785|ref|YP_003864456.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|350264184|ref|YP_004875491.1| genetic competence negative regulator ClpC/MecB [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|296149699|gb|EFG90594.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411028|gb|ADM36146.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|349597071|gb|AEP84859.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 810
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/736 (59%), Positives = 573/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSATGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|410658561|ref|YP_006910932.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|410661548|ref|YP_006913919.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
gi|409020916|gb|AFV02947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|409023904|gb|AFV05934.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
Length = 827
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/743 (58%), Positives = 573/743 (77%), Gaps = 20/743 (2%)
Query: 101 KVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGES 160
+VI LA EEA+R G NYIG+EH+LLGL+ EGEG+AARVL +L P I QV+ ++G
Sbjct: 85 RVIQLATEEAQRQGVNYIGTEHILLGLIIEGEGIAARVLADLKISPEKIWEQVVELLGGE 144
Query: 161 TEAVGAGVGGGSSGNK--------MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
TE G + G S+ N PTL E+G +LT +A EGKLDPVVGR +IERV+Q+
Sbjct: 145 TE--GTSMPGSSAANNSKPGQAGGTPTLNEFGRDLTVMAAEGKLDPVVGRGNEIERVIQV 202
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTAIAEGLAQRI + VP+ + K+V+TLD+ +VAGTKYRG
Sbjct: 203 LSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNNQVPEILVDKRVVTLDLSSMVAGTKYRG 262
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEER+KK+MEEI+ + +++FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+QCIGAT
Sbjct: 263 EFEERMKKVMEEIRLAGNVVVFIDELHTLIGAGAAEGAIDAANILKPALARGEMQCIGAT 322
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKHIE+DPALERRFQP+KV EP+V+ET+ ILKGLR++YE HH+++ +DEA+ AA
Sbjct: 323 TLDEYRKHIERDPALERRFQPIKVGEPTVEETVAILKGLRDKYEAHHRVKISDEAIDVAA 382
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YISDRFLPDKAIDLIDEA SRVR+ P + +ELE+E+ + KEK AV+ Q+
Sbjct: 383 RLSDRYISDRFLPDKAIDLIDEAASRVRIHSFTAPSDLKELEEEIENLKKEKEAAVKRQE 442
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA E+RD E + ++S + K E S+ E + VGP DI IVS+WTG+PV
Sbjct: 443 FEKAAEIRDEEQKKREKLSE-IRKNWEESR-EKDRMVVGP----EDISGIVSSWTGVPVN 496
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K+ ES RLLK+E LH+ VIGQDEAV A++R+IRRAR GLK+P RPI SFIF GPTGV
Sbjct: 497 KLEEGESFRLLKLESLLHESVIGQDEAVTAVARSIRRARAGLKDPKRPIGSFIFLGPTGV 556
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK++LA++LA FG E ++IR+DMSE+ME+H VS+++GSPPGYVG+ EGGQLTEAVRR+
Sbjct: 557 GKTQLARSLAESLFGDENSLIRVDMSEYMEKHAVSRMVGSPPGYVGHDEGGQLTEAVRRK 616
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+V+LFDEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+N +LIMTSNVG+S ++K
Sbjct: 617 PYSVILFDEIEKAHPEVFNILLQVLEDGRLTDSKGRLVDFRNCVLIMTSNVGASFLKK-- 674
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF + ++S Y + S + EELK+ FRPEFLNR+DEM+VF L + ++ +I I+
Sbjct: 675 ESLGF-VSGRSEESEYKSMSSRIMEELKKTFRPEFLNRVDEMVVFHPLKQDDLVKITKIL 733
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
+K+V RLK +++EL + + E + EEG +P+YGARPLRRAI +++ED ++EK+L
Sbjct: 734 IKDVSKRLKEQELELVLDDEVLEHLAEEGNDPTYGARPLRRAIQKMIEDPLSEKILEGTY 793
Query: 813 KEGDSVIVDVDSDGNVTVLNGSS 835
GD++ V++ SD V + ++
Sbjct: 794 NAGDTIKVEL-SDKEVVFVKPAA 815
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M +FT+KA KV MLA+ A+R+GH IG+EH LL L+ EGEGVAA+ L +G DP +
Sbjct: 1 MSRKFTQKAEKVFMLAEAIAKRMGHKIIGTEHFLLALIEEGEGVAAKALTGIGLDPDKVS 60
Query: 151 TQVIRMVGESTEAVG 165
++ +++G T G
Sbjct: 61 AKITQIIGVGTPISG 75
>gi|229159255|ref|ZP_04287279.1| Negative regulator of genetic competence [Bacillus cereus R309803]
gi|228624147|gb|EEK80949.1| Negative regulator of genetic competence [Bacillus cereus R309803]
Length = 811
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/731 (59%), Positives = 573/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI ++M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVNLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|403737328|ref|ZP_10950162.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
gi|403192628|dbj|GAB76932.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
Length = 870
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/762 (58%), Positives = 585/762 (76%), Gaps = 21/762 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD S +R VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQTVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AGVGG S+ P L+++G NLT+ A EGKLDPV+GR +IER
Sbjct: 140 QLLSGYQGKETAAAGVGGQSTQEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGRSKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPILIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKHIYTLDLGALVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRKHIEKDPALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKHIEKDPALERRFQPIQVAEPTLPHTIEILKGLRDRYEAHHRVSITDSAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
++AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 IAAANLADRYINDRYLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHVRREKEAAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
GQDFEKA +LRD E L+D K + E ++GD+ VV EVD I +++A
Sbjct: 440 DGQDFEKAAKLRDDE-------KQLID-AKAKREKEWKSGDMD-VVAEVDEELIAEVLAA 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ +ES RLL ME LHKR++G D+A+KA+S++IRR R GLK+P RP SFI
Sbjct: 491 STGIPVFKLTEEESTRLLNMEAELHKRIVGMDDAIKALSQSIRRTRAGLKDPRRPGGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+++I LDMSEF E+HTVS+L GSPPGYVGY EGGQL
Sbjct: 551 FAGPTGVGKTELAKALAEFLFGDEDSLITLDMSEFAEKHTVSRLFGSPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT+++MT+N+G+
Sbjct: 611 TEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVILMTTNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K +GF D S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 RDISK-AVSLGFAPDSSAGASNYERMKNKVQDELKQHFRPEFLNRVDDIVVFPQLTEDEI 729
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+I D+M+ + +RL+ KD+ ++++ ++ + ++GY+P GARPLRRAI R +ED ++E
Sbjct: 730 VQIVDLMIARLDERLRDKDMGIELSPAAKKLLAKKGYDPVLGARPLRRAIQRDIEDVLSE 789
Query: 806 KMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
K+L EI G+ V VDV+ +G GA + L DPLPV
Sbjct: 790 KILYGEIGAGELVSVDVEGEGKDAKFT-FVGAKKDL-DPLPV 829
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G T+A
Sbjct: 61 EQVQEIIGTGTQA 73
>gi|414161188|ref|ZP_11417449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876450|gb|EKS24356.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 821
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/732 (58%), Positives = 562/732 (76%), Gaps = 10/732 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQTAKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQ IGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQAIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRKHIEKD ALERRFQPV+V EP+V++TI ILKGLR+RYE HH++ +DEA+ +AA+
Sbjct: 317 LDEYRKHIEKDAALERRFQPVQVDEPTVEDTILILKGLRDRYEAHHRINISDEAVEAAAR 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSGRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHSQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + G +TE DI +++ WTGIP+ +
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWK------NKQGGANTSLTENDIAEVIAGWTGIPLTR 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES+RLL +E+TLHKRVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 LNETESERLLNLEDTLHKRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDE+EKAHPDVFN+MLQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEVEKAHPDVFNIMLQVLDDGFLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF DE + Y I+S + +ELK FRPEFLNR+D++IVF +L K E+KEI M+
Sbjct: 670 FAGFGGGSDE-GADYETIRSTMMKELKNAFRPEFLNRVDDIIVFHKLDKAELKEIVTKMV 728
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
+ DRL +DI ++VTE +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 729 SNLTDRLSEQDINIEVTEAAKEKIAEEGYDPQYGARPLIRAIQKTVEDNLSELILDGNQL 788
Query: 814 EGDSVIVDVDSD 825
EG V+VD + D
Sbjct: 789 EGKDVVVDHNGD 800
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 55/75 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ G +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFGITEDLVV 61
Query: 151 TQVIRMVGESTEAVG 165
T+V +++G+ E +G
Sbjct: 62 TEVEKLIGQGQEHIG 76
>gi|311070733|ref|YP_003975656.1| ClpC protein [Bacillus atrophaeus 1942]
gi|419823202|ref|ZP_14346762.1| ClpC protein [Bacillus atrophaeus C89]
gi|310871250|gb|ADP34725.1| ClpC [Bacillus atrophaeus 1942]
gi|388472733|gb|EIM09496.1| ClpC protein [Bacillus atrophaeus C89]
Length = 812
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/736 (59%), Positives = 574/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PSVDE++QIL+GLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSVDESVQILRGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G V+ DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SF+F GPTGVGK
Sbjct: 492 AQTETDKLLNMENLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFVFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLNEIVTLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++TE + +V +EG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|429503620|ref|YP_007184804.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485210|gb|AFZ89134.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 810
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/738 (59%), Positives = 573/738 (77%), Gaps = 16/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G V+ DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF++ +D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M
Sbjct: 671 VGFNV----QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLM 726
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I
Sbjct: 727 SDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNI 786
Query: 813 KEGDSVIVDVDSDGNVTV 830
+G +++DV+ DG V
Sbjct: 787 DKGQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|229188367|ref|ZP_04315415.1| Negative regulator of genetic competence [Bacillus cereus ATCC
10876]
gi|228595041|gb|EEK52812.1| Negative regulator of genetic competence [Bacillus cereus ATCC
10876]
Length = 811
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/731 (59%), Positives = 573/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAITAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|218233784|ref|YP_002364931.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
B4264]
gi|228919032|ref|ZP_04082411.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|229176682|ref|ZP_04304086.1| Negative regulator of genetic competence [Bacillus cereus 172560W]
gi|365164056|ref|ZP_09360142.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|423416018|ref|ZP_17393138.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|423428188|ref|ZP_17405192.1| chaperone ClpB [Bacillus cereus BAG4O-1]
gi|423578489|ref|ZP_17554600.1| chaperone ClpB [Bacillus cereus VD014]
gi|423590631|ref|ZP_17566693.1| chaperone ClpB [Bacillus cereus VD045]
gi|218161741|gb|ACK61733.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
B4264]
gi|228606725|gb|EEK64142.1| Negative regulator of genetic competence [Bacillus cereus 172560W]
gi|228840557|gb|EEM85819.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|363613357|gb|EHL64874.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|401094465|gb|EJQ02546.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|401127110|gb|EJQ34839.1| chaperone ClpB [Bacillus cereus BAG4O-1]
gi|401220268|gb|EJR26910.1| chaperone ClpB [Bacillus cereus VD045]
gi|401221214|gb|EJR27838.1| chaperone ClpB [Bacillus cereus VD014]
Length = 811
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/731 (59%), Positives = 573/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|228995472|ref|ZP_04155141.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
gi|229003095|ref|ZP_04160946.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228758155|gb|EEM07349.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228764276|gb|EEM13154.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
Length = 811
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/734 (59%), Positives = 575/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A EG+LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEATSGHQGGASANANTPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQIL+GLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILRGLRDRYEAHHRVSITDDAIEAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPDLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETNKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ + K +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEAL-KRNKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL++T E + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELELTSTAIESIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G V+ D + + V
Sbjct: 790 GQKVVFDAEGESFV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G TE
Sbjct: 62 KEVEALIGRGTE 73
>gi|229148491|ref|ZP_04276747.1| Negative regulator of genetic competence [Bacillus cereus m1550]
gi|228634907|gb|EEK91480.1| Negative regulator of genetic competence [Bacillus cereus m1550]
Length = 811
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/731 (59%), Positives = 573/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNASTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|385267113|ref|ZP_10045200.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
gi|385151609|gb|EIF15546.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
Length = 811
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/738 (59%), Positives = 573/738 (77%), Gaps = 16/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 81 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 141 QLLG--SNETGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 379 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G V+ DI +VS+WTG+PV K+
Sbjct: 439 KAASLRDTEQRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKI 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 613 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 671
Query: 695 IGFDLDYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF++ +D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M
Sbjct: 672 VGFNV----QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLM 727
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I
Sbjct: 728 SDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNI 787
Query: 813 KEGDSVIVDVDSDGNVTV 830
+G +++DV+ DG V
Sbjct: 788 DKGQHIVLDVE-DGEFVV 804
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGH IG+EH+LLGL+REGEG+A + LE LG + ++
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQ 61
Query: 151 TQVIRMVG---ESTEAV 164
+V ++G EST +V
Sbjct: 62 KEVESLIGRGQESTTSV 78
>gi|290958398|ref|YP_003489580.1| Clp family ATP-binding protease [Streptomyces scabiei 87.22]
gi|260647924|emb|CBG71029.1| putative Clp-family ATP-binding protease [Streptomyces scabiei
87.22]
Length = 841
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/758 (57%), Positives = 584/758 (77%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAASGDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILKIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMIGKVDERLKDRDMGIELSQAAKELLSKKGYDPVLGARPLRRTIQREVEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDAATFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|228989289|ref|ZP_04149281.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
gi|228770442|gb|EEM19014.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
Length = 811
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/734 (59%), Positives = 575/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A EG+LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEATSGHQGGASANANTPTLDSLARDLTVVAREGRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQIL+GLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILRGLRDRYEAHHRVSITDDAIEAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P + +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPDLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETNKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ + K +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEAL-KRNKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL++T E + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELELTSTAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G V+ D + + V
Sbjct: 790 GQKVVFDAEGESFV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G TE
Sbjct: 62 KEVEALIGRGTE 73
>gi|229917386|ref|YP_002886032.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229468815|gb|ACQ70587.1| ATPase AAA-2 domain protein [Exiguobacterium sp. AT1b]
Length = 811
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/738 (57%), Positives = 562/738 (76%), Gaps = 11/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGISLTKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + + A G S+ PTL+ +LT+ A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLGNTESSSNASQPGASAAT--PTLDGLARDLTQQARESRLDPVIGRAGEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTA+ EGLAQ+I + +VP+T+ K+V+ LDMG LVAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAVVEGLAQQIINNEVPETLRNKRVMVLDMGTLVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ +E QIL GLR+RYE HH++ TD A+ A L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVNEPTTEEAEQILLGLRDRYEAHHRVTITDTAIHEAVVL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEA S+VRLR P +ELE L I KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLVDEAASKVRLRSFTAPPNLKELESRLESIRKEKDSAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ L ++ + + G+ VT+ DI +V+ WTG+PV K+
Sbjct: 438 KAASLRDTEQKLRDELEEL------KAEWQNKQGNEKLEVTKEDIAQVVANWTGVPVTKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+DRLLK+E LH RVIGQD+AVK+ISRAIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AEEETDRLLKLESILHNRVIGQDDAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARAVAEAMFGDEDAIIRIDMSEYMEKHATSRLVGSPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQ+L+DGRLTDSKGRTVDF+NT++IMTSNVG++ +++ +
Sbjct: 612 SVILLDEIEKAHPEVFNILLQVLDDGRLTDSKGRTVDFRNTVIIMTSNVGAAALQR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF ++ D K Y +K V EELK+ FRPEFLNR+DE+ VF L K ++EI +M +
Sbjct: 671 VGFTVEDDVK-REYTEMKDKVLEELKKAFRPEFLNRIDEITVFHSLQKEHIQEIIKLMAE 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RL + ++ +T+ +++ + GY+P YGARPLRRA+ R +ED ++E ML I
Sbjct: 730 TLKKRLAEQGVDFSLTDAALDKIADVGYDPEYGARPLRRALQREVEDRLSEAMLGGTIAR 789
Query: 815 GDSVIVDVDSDGNVTVLN 832
G V +DV DG V N
Sbjct: 790 GSKVALDV-QDGEFVVRN 806
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A +V+ LAQEEA RLGH+ IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQRVLALAQEEAVRLGHHNIGTEHILLGLVREGEGIAAKALFALGLTSEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 62 QEVESLIGRGSE 73
>gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
gi|56908137|dbj|BAD62664.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
Length = 818
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/739 (58%), Positives = 570/739 (77%), Gaps = 16/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 84 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 143
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + + G ++ PTL+ +LT +A E LDPV+GR +IERV+Q+L
Sbjct: 144 QLLGSNEGGSSSQSNGAATNANTPTLDSLARDLTAIAREETLDPVIGRSREIERVIQVLS 203
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 204 RRTKNNPVLIGEPGVGKTAIAEGLAQSIVANEVPETLRNKRVMTLDMGTVVAGTKYRGEF 263
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 264 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 323
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP++DE+IQIL GLR+RYE HH++ TDEA+ A +L
Sbjct: 324 DEYRKYIEKDAALERRFQPIQVDEPTIDESIQILYGLRDRYEAHHRVTITDEAVEEAVKL 383
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRLR P +ELE +L + KEK+ +V+ Q+FE
Sbjct: 384 SDRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEAKLEETRKEKDASVQSQEFE 443
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTGIPV 511
KA LRD E L+ ++ + ++ K+ E TEV DI +VS+WTGIPV
Sbjct: 444 KAASLRDTEQRLREELEEMKNEWKKKQGQEN---------TEVLVEDIAQVVSSWTGIPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ +E++RLLKMEE LH+RV+GQ+EAVK+IS+AIRRAR GLK+P RPI SFIF GPTG
Sbjct: 495 SKLAEEETERLLKMEEILHERVVGQEEAVKSISKAIRRARAGLKDPKRPIGSFIFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVG+ EGGQLTE +RR
Sbjct: 555 VGKTELARAVAETLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEEGGQLTEKIRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+V+L DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S +++
Sbjct: 615 KPYSVILLDEIEKAHPDVFNLLLQVLEDGRLTDSKGRTVDFRNTAVIMTSNVGASQLKR- 673
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF ++ + ++ Y +K V ELK FRPEFLNR+DE+IVF L K V++I
Sbjct: 674 NKYLGFTIESEGQE--YKDMKDRVMSELKNSFRPEFLNRIDEIIVFHSLEKKHVRKIITK 731
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M ++ RL + I+ ++TE ++++ + G++P YGARPLRRA+ + +ED ++E++L
Sbjct: 732 MADQLKGRLSEQGIDFELTEEAKDKITDIGFDPEYGARPLRRALQKEVEDRLSEELLKGT 791
Query: 812 IKEGDSVIVDVDSDGNVTV 830
I +G ++ V DG + V
Sbjct: 792 IVKGQKAVIYV-KDGKLMV 809
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F RFTE+A KV+ L+QEEA RL H+ IG+EH+LLGL+REGEG+AA+ L+ LG ++
Sbjct: 2 IFGRFTERAQKVLALSQEEAIRLSHHNIGTEHILLGLIREGEGIAAKALQQLGLGSEKLQ 61
Query: 151 TQVIRMVGESTE 162
+V +VG+ E
Sbjct: 62 KEVETLVGKGQE 73
>gi|154684604|ref|YP_001419765.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|375360776|ref|YP_005128815.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384263716|ref|YP_005419423.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387896613|ref|YP_006326909.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|394994757|ref|ZP_10387464.1| ClpC [Bacillus sp. 916]
gi|451348524|ref|YP_007447155.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452854149|ref|YP_007495832.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|154350455|gb|ABS72534.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|371566770|emb|CCF03620.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380497069|emb|CCG48107.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387170723|gb|AFJ60184.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|393804324|gb|EJD65736.1| ClpC [Bacillus sp. 916]
gi|449852282|gb|AGF29274.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452078409|emb|CCP20159.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 810
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/738 (59%), Positives = 573/738 (77%), Gaps = 16/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS DE+IQILKGLR+RYE HH++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G V+ DI +VS+WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKTWKE------KQGQENSEVSVEDIAMVVSSWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF++ +D S N +K V ELK+ FRPEF+NR+DE+IVF L K + +I +M
Sbjct: 671 VGFNV----QDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTDIVSLM 726
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I
Sbjct: 727 SDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNI 786
Query: 813 KEGDSVIVDVDSDGNVTV 830
+G +++DV+ DG V
Sbjct: 787 DKGQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|408678941|ref|YP_006878768.1| ATP-dependent Clp protease [Streptomyces venezuelae ATCC 10712]
gi|328883270|emb|CCA56509.1| ATP-dependent Clp protease [Streptomyces venezuelae ATCC 10712]
Length = 840
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/758 (58%), Positives = 580/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGDLIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AV +SRAIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAVIGLSRAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D++IVF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAAQGDTK-SNYERMKAKVSDELKQHFRPEFLNRVDDIIVFPQLTQDDILQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMISRVDERLKDRDMGIELSQSAKELLAKKGYDPVMGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDERTFTFRGEEKTALPDAPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|228912821|ref|ZP_04076468.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228846757|gb|EEM91762.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 811
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/734 (59%), Positives = 573/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSEMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|28212201|ref|NP_783145.1| negative regulator of genetic competence mecB/clpC [Clostridium
tetani E88]
gi|28204645|gb|AAO37082.1| negative regulator of genetic competence mecB/clpC [Clostridium
tetani E88]
Length = 811
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/731 (57%), Positives = 562/731 (76%), Gaps = 7/731 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HN+I EH+LL L++E EG+A +L NLG D + +R +++
Sbjct: 81 LTPRTKRLLEISLLEARNLNHNFITPEHILLALIKESEGIAFTILSNLGVDFNRLRKELL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
V + PTL E+G +LT +A EGKLDPV+GR + +RV+QIL
Sbjct: 141 ENVAGERSVNRSSSDTNKKNQDTPTLNEFGRDLTDMAMEGKLDPVIGRDKETQRVLQILC 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIG+PGVGKTAIAEGLAQ+I G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 201 RRTKNNPCLIGDPGVGKTAIAEGLAQKIVEGNIPEILKDKRVVTLDLSSMIAGAKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEEI++S +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT+
Sbjct: 261 EDRLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATTI 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQP+ V EP+ +E I IL+GLR++YE HH+ TDEA+ +A L
Sbjct: 321 DEYRKHIEKDSALERRFQPITVGEPTKEEAILILRGLRDKYEAHHRANITDEAIEAAVNL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI++R+LPDKAIDL+DEA S+VR+ + P + +ELE+ L ++TKEK +A+R QDFE
Sbjct: 381 SDRYITERYLPDKAIDLMDEAASKVRIENMIAPTDMKELEENLEKVTKEKEDAIRVQDFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +LRD E DLK ++ L K + T V E I +VS WT IPV K+
Sbjct: 441 KAAQLRDHEKDLKYRLENLKSDWKTQKQVAT------LTVDETQIAAVVSKWTNIPVRKL 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+EETLH RVIGQ+EAVK++SRA+RRARVGLK+PNRPI SFIF GPTGVGK
Sbjct: 495 TEKESERLLKLEETLHNRVIGQNEAVKSVSRAVRRARVGLKDPNRPIGSFIFLGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E +MIR+DMSE+ME+H VS+LIGSPPGYVGY EGGQLTE VRR PY
Sbjct: 555 TELSKALAEAMFGDESSMIRIDMSEYMEKHAVSRLIGSPPGYVGYDEGGQLTEKVRRHPY 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQILEDGRLTD KG+TV+FKNT++IMTSNVG+S I+K +
Sbjct: 615 SVILFDEIEKAHPDVFNILLQILEDGRLTDGKGKTVNFKNTIIIMTSNVGASTIKK-QKS 673
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D+ +S Y ++K V EELK+ FRPEFLNR+D++IVF +L + ++++I +ML+
Sbjct: 674 LGFAISDDKIESEYEQMKENVMEELKRSFRPEFLNRIDDIIVFHKLREEDLEKIVALMLE 733
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
V RLK +DI + ++ ++ + ++G++P YGARPLRRAI + +ED ++E++L I++
Sbjct: 734 SVTHRLKNQDINISFDKKSQKFLAKKGFDPVYGARPLRRAITKAVEDKLSEEILKGSIEK 793
Query: 815 GDSVIVDVDSD 825
GD V+V V+ +
Sbjct: 794 GDKVLVSVNEE 804
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F RF E+A KV++ AQE AR H Y+G+EH+LLG+L+E EG++ +L+++ + ++
Sbjct: 2 IFGRFNERAQKVLVFAQESARNYRHGYVGTEHILLGILKE-EGISKNILKDMNVELEDVE 60
Query: 151 TQV 153
+ +
Sbjct: 61 SLI 63
>gi|228950630|ref|ZP_04112764.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229067847|ref|ZP_04201164.1| Negative regulator of genetic competence [Bacillus cereus F65185]
gi|423422315|ref|ZP_17399346.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|423439463|ref|ZP_17416401.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
gi|423507892|ref|ZP_17484459.1| chaperone ClpB [Bacillus cereus HD73]
gi|449086748|ref|YP_007419189.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|228715206|gb|EEL67065.1| Negative regulator of genetic competence [Bacillus cereus F65185]
gi|228808981|gb|EEM55466.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401112817|gb|EJQ20691.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
gi|401120032|gb|EJQ27833.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|402442679|gb|EJV74600.1| chaperone ClpB [Bacillus cereus HD73]
gi|449020505|gb|AGE75668.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 811
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/731 (59%), Positives = 572/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVNLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|288554696|ref|YP_003426631.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
gi|288545856|gb|ADC49739.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
Length = 813
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/732 (58%), Positives = 572/732 (78%), Gaps = 11/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + + GG ++ PTL+ +LT +A E LDPV+GR +IERV+Q+L
Sbjct: 140 QLLGSNEVGSSSQQGGSATHANTPTLDSLARDLTAIAREESLDPVIGRSKEIERVIQVLS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 200 RRTKNNPVLIGEPGVGKTAIAEGLAQAIVANEVPETLRNKRVMTLDMGTVVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 260 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+++E+I ILKGLR+RYE HH++ TDEA+ + ++
Sbjct: 320 DEYRKYIEKDAALERRFQPIQVNEPTLEESILILKGLRDRYEAHHRVTITDEAIEESVKM 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRLR P +ELE L + KEK+ AV+ Q+FE
Sbjct: 380 SDRYISDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEGRLEETRKEKDAAVQSQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKG-KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
KA LRD E L+ ++ + ++ K+ + +TE VV E DI +V++WTGIPV K
Sbjct: 440 KAASLRDTEQRLREELEEMKNEWKKKQGQEDTE------VVVE-DIAQVVASWTGIPVSK 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ +E++RLLKME+ LH+RV+GQ+EAV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 493 LAEEETERLLKMEKILHERVVGQEEAVISISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+A+A FG E+A+IR+DMSE+ME+H S+L+GSPPGYVG+ +GGQLTE VRR+P
Sbjct: 553 KTELARAVAETLFGDEDAVIRIDMSEYMEKHATSRLVGSPPGYVGHEDGGQLTEKVRRKP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDF+NT +IMTSNVG+S +++ +
Sbjct: 613 YSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSNVGASTLKR-NK 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF + + ++ Y +K V ELK+ FRPEFLNR+DE+IVF L K V+EI +M
Sbjct: 672 YLGFTTESEGQE--YKDMKGKVMAELKRSFRPEFLNRIDEIIVFHSLEKKHVREIITLMA 729
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RLK + I+ ++TE ++++ + GY+P YGARPLRRA+ + +ED ++E++L I
Sbjct: 730 DQLKQRLKEQGIDFELTEAAKDKITDLGYDPEYGARPLRRALQKQVEDRLSEELLKGTIF 789
Query: 814 EGDSVIVDVDSD 825
+G I+DV D
Sbjct: 790 KGQKAIIDVKDD 801
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF R TE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRLTERAQKVLALAQEEAIRLGHNNIGTEHVLLGLIREGEGIAAKALQALGLGSEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G+ E
Sbjct: 62 KEVETLIGKGQE 73
>gi|30260272|ref|NP_842649.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Ames]
gi|42779162|ref|NP_976409.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
ATCC 10987]
gi|47525336|ref|YP_016685.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. 'Ames Ancestor']
gi|47569816|ref|ZP_00240486.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Bacillus
cereus G9241]
gi|49183115|ref|YP_026367.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Sterne]
gi|49481552|ref|YP_034434.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|65317542|ref|ZP_00390501.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bacillus anthracis str. A2012]
gi|118475852|ref|YP_893003.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis str. Al Hakam]
gi|165873139|ref|ZP_02217755.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0488]
gi|167635098|ref|ZP_02393415.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0442]
gi|167641960|ref|ZP_02400195.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0193]
gi|170689571|ref|ZP_02880757.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0465]
gi|170707575|ref|ZP_02898028.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0389]
gi|177655585|ref|ZP_02936966.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0174]
gi|190568958|ref|ZP_03021859.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Tsiankovskii-I]
gi|196036353|ref|ZP_03103750.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
W]
gi|196041747|ref|ZP_03109037.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NVH0597-99]
gi|196047734|ref|ZP_03114935.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB108]
gi|206978371|ref|ZP_03239244.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
H3081.97]
gi|217957658|ref|YP_002336200.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH187]
gi|218901283|ref|YP_002449117.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH820]
gi|222093852|ref|YP_002527902.1| negative regulator of genetic competence clpc/mecb (ATP-dependent
clp protease) [Bacillus cereus Q1]
gi|225862134|ref|YP_002747512.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB102]
gi|227812755|ref|YP_002812764.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CDC 684]
gi|228925335|ref|ZP_04088431.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228931584|ref|ZP_04094490.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228943888|ref|ZP_04106273.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228983337|ref|ZP_04143550.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229089213|ref|ZP_04220494.1| Negative regulator of genetic competence [Bacillus cereus Rock3-42]
gi|229119744|ref|ZP_04249005.1| Negative regulator of genetic competence [Bacillus cereus 95/8201]
gi|229136928|ref|ZP_04265555.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST26]
gi|229153860|ref|ZP_04281990.1| Negative regulator of genetic competence [Bacillus cereus ATCC
4342]
gi|229182476|ref|ZP_04309727.1| Negative regulator of genetic competence [Bacillus cereus BGSC 6E1]
gi|229194472|ref|ZP_04321275.1| Negative regulator of genetic competence [Bacillus cereus m1293]
gi|229601409|ref|YP_002864733.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0248]
gi|254684415|ref|ZP_05148275.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CNEVA-9066]
gi|254724222|ref|ZP_05186007.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A1055]
gi|254733764|ref|ZP_05191479.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Western North America USA6153]
gi|254744615|ref|ZP_05202294.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Kruger B]
gi|254756320|ref|ZP_05208349.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Vollum]
gi|254758398|ref|ZP_05210425.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Australia 94]
gi|300119607|ref|ZP_07057151.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
SJ1]
gi|301051819|ref|YP_003790030.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
biovar anthracis str. CI]
gi|375282179|ref|YP_005102614.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NC7401]
gi|376264109|ref|YP_005116821.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Bacillus
cereus F837/76]
gi|386733948|ref|YP_006207129.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. H9401]
gi|402554332|ref|YP_006595603.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
FRI-35]
gi|421510407|ref|ZP_15957300.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. UR-1]
gi|421640496|ref|ZP_16081078.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. BF1]
gi|423357627|ref|ZP_17335222.1| chaperone ClpB [Bacillus cereus IS075]
gi|423376326|ref|ZP_17353640.1| chaperone ClpB [Bacillus cereus AND1407]
gi|423553984|ref|ZP_17530311.1| chaperone ClpB [Bacillus cereus ISP3191]
gi|423572073|ref|ZP_17548287.1| chaperone ClpB [Bacillus cereus MSX-A12]
gi|423578066|ref|ZP_17554185.1| chaperone ClpB [Bacillus cereus MSX-D12]
gi|423608093|ref|ZP_17583986.1| chaperone ClpB [Bacillus cereus VD102]
gi|30253593|gb|AAP24135.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Ames]
gi|42735077|gb|AAS39017.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
ATCC 10987]
gi|47500484|gb|AAT29160.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. 'Ames Ancestor']
gi|47553509|gb|EAL11890.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Bacillus
cereus G9241]
gi|49177042|gb|AAT52418.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Sterne]
gi|49333108|gb|AAT63754.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|118415077|gb|ABK83496.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis str. Al Hakam]
gi|164711119|gb|EDR16680.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0488]
gi|167510091|gb|EDR85502.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0193]
gi|167529572|gb|EDR92322.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0442]
gi|170127571|gb|EDS96445.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0389]
gi|170666484|gb|EDT17261.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0465]
gi|172080049|gb|EDT65147.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0174]
gi|190559882|gb|EDV13866.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Tsiankovskii-I]
gi|195990983|gb|EDX54954.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
W]
gi|196021437|gb|EDX60143.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB108]
gi|196027367|gb|EDX65984.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NVH0597-99]
gi|206743432|gb|EDZ54866.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
H3081.97]
gi|217064980|gb|ACJ79230.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH187]
gi|218540030|gb|ACK92428.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH820]
gi|221237900|gb|ACM10610.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus Q1]
gi|225787223|gb|ACO27440.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB102]
gi|227007271|gb|ACP17014.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CDC 684]
gi|228588938|gb|EEK46953.1| Negative regulator of genetic competence [Bacillus cereus m1293]
gi|228600931|gb|EEK58500.1| Negative regulator of genetic competence [Bacillus cereus BGSC 6E1]
gi|228629541|gb|EEK86238.1| Negative regulator of genetic competence [Bacillus cereus ATCC
4342]
gi|228646466|gb|EEL02673.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST26]
gi|228663645|gb|EEL19224.1| Negative regulator of genetic competence [Bacillus cereus 95/8201]
gi|228694052|gb|EEL47734.1| Negative regulator of genetic competence [Bacillus cereus Rock3-42]
gi|228776327|gb|EEM24680.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228815721|gb|EEM61957.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228828012|gb|EEM73740.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228834257|gb|EEM79798.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229265817|gb|ACQ47454.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0248]
gi|298723079|gb|EFI63977.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
SJ1]
gi|300373988|gb|ADK02892.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
biovar anthracis str. CI]
gi|358350702|dbj|BAL15874.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NC7401]
gi|364509909|gb|AEW53308.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Bacillus
cereus F837/76]
gi|384383800|gb|AFH81461.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. H9401]
gi|401074493|gb|EJP82893.1| chaperone ClpB [Bacillus cereus IS075]
gi|401088783|gb|EJP96965.1| chaperone ClpB [Bacillus cereus AND1407]
gi|401182191|gb|EJQ89330.1| chaperone ClpB [Bacillus cereus ISP3191]
gi|401198795|gb|EJR05708.1| chaperone ClpB [Bacillus cereus MSX-A12]
gi|401203646|gb|EJR10482.1| chaperone ClpB [Bacillus cereus MSX-D12]
gi|401238776|gb|EJR45209.1| chaperone ClpB [Bacillus cereus VD102]
gi|401795542|gb|AFQ09401.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
FRI-35]
gi|401819489|gb|EJT18666.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. UR-1]
gi|403392312|gb|EJY89566.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. BF1]
Length = 811
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/734 (59%), Positives = 573/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|441154708|ref|ZP_20966583.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618124|gb|ELQ81204.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 839
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/758 (58%), Positives = 578/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARETKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QL+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QD
Sbjct: 380 QLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FE A LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEMAAGLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K SSY R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAAQGDTK-SSYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ ++++ ++ + + GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMIAKVDERLKDRDMGIELSGEAKKLLAKRGYDPVLGARPLRRTIQREIEDALSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD++ +G +L D PV
Sbjct: 789 SELRPGHIVVVDIEGEGENAKFTFRGEEKSALPDAPPV 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|381184365|ref|ZP_09892990.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
gi|380315745|gb|EIA19239.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
Length = 820
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/737 (58%), Positives = 574/737 (77%), Gaps = 13/737 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGVSLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G A G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLGGGDSAAS---GRQTNTQATPTLDSLARDLTVIAREENLDPVIGRAKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EPSV+E+IQIL GLR+RYE HH++ TD+AL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPSVEESIQILHGLRDRYEAHHRVAITDDALDAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDEAGS+VRL+ P + +E+E EL ++ KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDEAGSKVRLKAYTTPTDLKEMELELSELKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA RDRE L+ + +++S E + D VTE + +V++WTGIPV K
Sbjct: 436 EKAASFRDREHKLRKSLEE-----EKLSWKEKQGRD-NSQVTEDIVAEVVASWTGIPVMK 489
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E+D+LL ME+ LH+RVIGQDEAVKA+S A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 490 LAETETDKLLNMEKLLHERVIGQDEAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVG 549
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++P
Sbjct: 550 KTELARALAESMFGDEDAMIRVDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKP 609
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 610 YSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KVDK 668
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF++ KD + ++ V +ELK+ FRPEF+NR+DE IVF LT+ E+K+I ++
Sbjct: 669 SMGFNVTDVTKD--HKAMEHRVLQELKKAFRPEFINRIDETIVFHSLTEKELKQIVTLLT 726
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI +++T+ + ++ +EGY+P YGARPL+RAI + +ED ++E++L ++
Sbjct: 727 GQLTKRLAERDIHVKLTDGAKSKIAKEGYDPEYGARPLKRAIQKNIEDRLSEELLRGNVQ 786
Query: 814 EGDSVIVDVDSDGNVTV 830
GD++ + V DG + V
Sbjct: 787 VGDTIEIGV-KDGELEV 802
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISAEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G+ + V
Sbjct: 62 QEVEGLIGQGEKTV 75
>gi|206972226|ref|ZP_03233173.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH1134]
gi|206732800|gb|EDZ49975.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH1134]
Length = 811
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/731 (59%), Positives = 573/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G V+ DV+ +
Sbjct: 790 GQKVMFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|427421597|ref|ZP_18911780.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425757474|gb|EKU98328.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 820
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/747 (60%), Positives = 569/747 (76%), Gaps = 30/747 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT K +V A +EAR+L H YI EHLLL L + E VA RVL NLG DP+ +RTQ+I
Sbjct: 80 FTPKVKQVFEQAFQEARKLDHPYIEPEHLLLSLTQNLESVAYRVLTNLGVDPTQVRTQLI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMP---------TLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
R +GE + AV AG G S + P L E+ T+LT+LA GKLDPV+GR +
Sbjct: 140 RTIGEVS-AVTAG--GRSRDGERPEQASKRNSGVLAEFSTDLTELAANGKLDPVIGRFEE 196
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERVVQILGRRTKNNP L+GEPGVGKTAIAEGLAQRI + DVP+ + ++VI+LD+ +LV
Sbjct: 197 IERVVQILGRRTKNNPVLVGEPGVGKTAIAEGLAQRIVNQDVPEALFDRRVISLDLAMLV 256
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
+GT++RG+FEERL ++M E++++ IIL IDE+HTL+GAG+ EG++DAAN+LKP+LARGE
Sbjct: 257 SGTRFRGDFEERLNQVMSEVREAQNIILVIDEIHTLVGAGSLEGSMDAANLLKPALARGE 316
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQCIGATTL+EYRK+IEKD ALERRFQ V V PSV++T++IL G+R RYE H+L TD
Sbjct: 317 LQCIGATTLEEYRKYIEKDAALERRFQRVTVAPPSVEDTLEILGGIRGRYEQFHRLTITD 376
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQ-LPEEARELEKELRQITKEK 444
EAL +AA L+ +YI+DR+LPDKAIDLIDEAGSRVRLR++Q +P A E ELRQ+ +
Sbjct: 377 EALEAAATLADRYINDRYLPDKAIDLIDEAGSRVRLRYSQKIP--AGEKRTELRQVQGKI 434
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
E + Q F LR +E L A++ G P VT DI IVS
Sbjct: 435 MELLESQAFNDVAALRAKEQGLLAEL--------------VPNGTPHPEVTNEDIADIVS 480
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
AWTG+PV ++S ES +L +E+TLH+RVIGQ+EAV+A+++A+RR+RVG++NPNRPIAS
Sbjct: 481 AWTGVPVNRLSESESAMILHLEDTLHERVIGQNEAVEAVAKAVRRSRVGMRNPNRPIASL 540
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IFSGPTGVGK+ELAKALAA FG+E+AMIR+DMSEFME +VSKLIGSPPGYVGY EGGQ
Sbjct: 541 IFSGPTGVGKTELAKALAASVFGAEDAMIRVDMSEFMEPQSVSKLIGSPPGYVGYDEGGQ 600
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTEAVRR+PYTV+L DEIEKAHPDVFN++LQ+L+DG L D+KGR V FKNTL+IMTSN+G
Sbjct: 601 LTEAVRRKPYTVILLDEIEKAHPDVFNILLQLLDDGHLNDAKGRKVSFKNTLIIMTSNIG 660
Query: 685 SSVIEKGGRRIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
S VIEKGG +GF+L DE S YN I++LV EE+KQ+FRPE LNR+DE+IVFRQL K
Sbjct: 661 SKVIEKGGGGLGFELSTDDEMTSRYNNIRNLVNEEMKQFFRPELLNRIDEIIVFRQLIKQ 720
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
EV +IADI+L +V RL ++I ++T+ FRE +V EGY+ +YGARP+RRAI RL+ED +
Sbjct: 721 EVAQIADILLAQVTGRLAERNITFELTDAFREHLVNEGYDQTYGARPMRRAISRLVEDYL 780
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTV 830
AE +LA I +GD+ + D+D D V V
Sbjct: 781 AEALLAGTITDGDTAVFDLDDDARVLV 807
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT AI VIM AQEEARRLGHN++GSE LLLG+++EG +AARVL + G + +N R
Sbjct: 1 MFEHFTNAAIAVIMQAQEEARRLGHNFVGSEQLLLGIVKEGSSIAARVLSDFGVNLANSR 60
Query: 151 TQVIRMVGEST 161
+V ++G +
Sbjct: 61 AEVESIIGRGS 71
>gi|289551675|ref|YP_003472579.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/Negative
regulator of genetic competence clcC/mecB
[Staphylococcus lugdunensis HKU09-01]
gi|315659135|ref|ZP_07912000.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis M23590]
gi|385785222|ref|YP_005761395.1| putative stress response-related Clp ATPase [Staphylococcus
lugdunensis N920143]
gi|418416002|ref|ZP_12989205.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289181206|gb|ADC88451.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/Negative
regulator of genetic competence clcC/mecB
[Staphylococcus lugdunensis HKU09-01]
gi|315495859|gb|EFU84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis M23590]
gi|339895478|emb|CCB54806.1| putative stress response-related Clp ATPase [Staphylococcus
lugdunensis N920143]
gi|410873860|gb|EKS21794.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 819
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/730 (57%), Positives = 565/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
R+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 RYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + +G + N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG--SPEMGTKNAQTNKSNNTPTLDSLARDLTVIAKDGTLDPVIGRTKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIINNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV++TI+ILKGLR+RYE HH++ +D+AL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVEDTIEILKGLRDRYEAHHRINISDQALDAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRLR P + +E+E+ + KEK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLRSHTTPTNLKSIEQEIETVKKEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D KE A+ G +++ DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKKEWQNAQ---GGSNTELSQEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEATLHGRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAETMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGQD--YETIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI+++VT++ +E + EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTQRLSEQDIQIEVTDKAKEVIAEEGYDPEYGARPLIRAIQKTVEDNLSELILEGNQI 787
Query: 814 EGDSVIVDVD 823
EG +V +D D
Sbjct: 788 EGKAVTIDHD 797
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
T+V +++G E G
Sbjct: 62 TEVEKLIGHGQEQAG 76
>gi|300857273|ref|YP_003782257.1| ATPase [Clostridium ljungdahlii DSM 13528]
gi|300437388|gb|ADK17155.1| predicted ATPase with chaperone activity [Clostridium ljungdahlii
DSM 13528]
Length = 813
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/715 (58%), Positives = 562/715 (78%), Gaps = 8/715 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ L+ EAR L HNYI EH+LL L+RE EGVA +L NLG D + +R +++
Sbjct: 81 LTPRTKRLLELSLFEARNLNHNYISPEHILLALIREAEGVAFTILNNLGVDFNKLRKELV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ ++ + +G PTL+++G +LT +A+EGKLDPV+GR + +RV++IL
Sbjct: 141 DSLSGEQSSMNSNSTKKENGEPTPTLDQFGRDLTDMAKEGKLDPVIGRDKETQRVLEILS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIG+PGVGKTAIAEGLA++I S ++P+ + GK+V+TLD+ ++AG+KYRGEF
Sbjct: 201 RRTKNNPCLIGDPGVGKTAIAEGLAEKIVSCNIPELLRGKRVVTLDLSSMIAGSKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK+MEEI++S +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+QCIGATT+
Sbjct: 261 EERLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGATTI 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +E + ILKGLR++YE HH+++ DEA+ +A L
Sbjct: 321 DEYRKYIEKDAALERRFQPIIVGEPTKEEAVLILKGLRDKYEAHHRVKIIDEAIDAAVNL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DR+LPDKAIDLIDEA ++VR+++ P + + LE+EL + TKEK +++R QDFE
Sbjct: 381 SDRYITDRYLPDKAIDLIDEAAAKVRIQNLIAPPDLKNLEEELEKATKEKEDSIRVQDFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L K +K E VG E I +VS WT IPVEK+
Sbjct: 441 KAASLRDKEKELKNKLEGLKTNWK--TKKEVSTLTVG----EDQIASVVSQWTNIPVEKL 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+EE LHKRV+GQDEAVK+IS+A+RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 495 TEKESERLLKLEEILHKRVVGQDEAVKSISKAVRRARVGLKDPKRPIGSFIFLGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E MIR+DMSE+ME+HTVS+LIGSPPGYVGY EGGQLTE VRR PY
Sbjct: 555 TELSKALAEAMFGDENNMIRIDMSEYMEKHTVSRLIGSPPGYVGYDEGGQLTEKVRRNPY 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+T++FKNT++IMTSNVG++ I K +
Sbjct: 615 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNVGAATIRK-QKS 673
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF D+K+S Y ++K + EELK FRPEFLNR+D++IVF QL + ++K+I +ML
Sbjct: 674 MGFTAAKGDDKESQYEKMKDNIMEELKNSFRPEFLNRIDDIIVFHQLEEEDLKQIVKLML 733
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
K+V RLK ++IE+ T++ +E + +EG++ +YGARPLRRAI + +ED ++E+ML
Sbjct: 734 KDVSSRLKDQEIEIGFTDKAQELLAKEGFDLTYGARPLRRAITKTVEDKLSEEML 788
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV++ AQEEA+ L H Y+G+EH+LLG+L+E EG++ +L ++ + +R
Sbjct: 2 MFGRFTERAQKVLVYAQEEAQALQHGYVGTEHILLGILKE-EGISRNLLSDMNVNIETVR 60
Query: 151 T 151
Sbjct: 61 N 61
>gi|229170933|ref|ZP_04298534.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|423405194|ref|ZP_17382367.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|423462644|ref|ZP_17439438.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|423480037|ref|ZP_17456751.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
gi|228612473|gb|EEK69694.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|401130823|gb|EJQ38479.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|401645564|gb|EJS63219.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|402424021|gb|EJV56217.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
Length = 811
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/734 (59%), Positives = 572/734 (77%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVKRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|456391789|gb|EMF57147.1| Clp family ATP-binding protease [Streptomyces bottropensis ATCC
25435]
Length = 841
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/758 (57%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAASGDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILKIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + +GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMIGKVDERLKDRDMGIELSQAAKELLSRKGYDPVLGARPLRRTIQREVEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGETATFTFRGEEKAALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|291452160|ref|ZP_06591550.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|359151484|ref|ZP_09184191.1| ATP-dependent Clp protease [Streptomyces sp. S4]
gi|421738771|ref|ZP_16177114.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|291355109|gb|EFE82011.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|406692815|gb|EKC96493.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 840
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/759 (58%), Positives = 583/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIVLFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDEDLIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+SRAIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSRAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALA + FG EEA+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKALAEFLFGDEEALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K S+Y R+K+ V++ELKQ+FRPEFLNR+D++IVF QL++ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDTK-SNYERMKAKVSDELKQHFRPEFLNRVDDVIVFPQLSQDDILQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ V +RLK +D+ L++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 VDLMVSRVDERLKDRDMGLELSQEAKELLAKKGYDPVLGARPLRRTIQREIEDTLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
+++ G V+V + +G+ +L D PV
Sbjct: 789 FGDLRPGHIVVVGTEGEGDGKTFTFRGEEKSALPDAPPV 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|392969833|ref|ZP_10335245.1| ATP-dependent Clp protease ATP-binding subunit [Staphylococcus
equorum subsp. equorum Mu2]
gi|392512121|emb|CCI58441.1| ATP-dependent Clp protease ATP-binding subunit [Staphylococcus
equorum subsp. equorum Mu2]
Length = 820
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/733 (57%), Positives = 563/733 (76%), Gaps = 13/733 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG-SPELSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++GK+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQSIIKNEVPETLKGKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ ++ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGDVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEA++SAA
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEAVISAAT 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++Y+SDRFLPDKAIDLIDEA S+VRLR P +ELE+E+ Q+ EK+ AV Q+F
Sbjct: 377 LSHRYVSDRFLPDKAIDLIDEASSKVRLRSHTTPPNLKELEQEIEQVKNEKDAAVHSQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q + K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEANNNWKNAQNGDNTS------LSEEDIGEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHNRVIGQKAAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I++ + +ELK FRPEFLNR+D+ IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGQD--YETIRNTMMKELKNAFRPEFLNRVDDTIVFHKLSKEELKEIVTMMI 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI ++VT+ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTGRLSEQDINIEVTDAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSDG 826
EG V++D DG
Sbjct: 788 EGKK--VEIDHDG 798
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFEITEEKVV 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G E +GA
Sbjct: 62 EEVEKLIGHGQEQMGA 77
>gi|229074143|ref|ZP_04207189.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|229094804|ref|ZP_04225809.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|229100880|ref|ZP_04231685.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|229113758|ref|ZP_04243193.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|407708030|ref|YP_006831615.1| ATP/GTP hydrolase [Bacillus thuringiensis MC28]
gi|423381871|ref|ZP_17359154.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|423439740|ref|ZP_17416646.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|423450103|ref|ZP_17426981.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|423467997|ref|ZP_17444765.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|423537397|ref|ZP_17513815.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|423543125|ref|ZP_17519513.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|423543569|ref|ZP_17519927.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|423620310|ref|ZP_17596141.1| chaperone ClpB [Bacillus cereus VD115]
gi|423626976|ref|ZP_17602751.1| chaperone ClpB [Bacillus cereus VD148]
gi|228669629|gb|EEL25036.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|228682534|gb|EEL36606.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|228688547|gb|EEL42420.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|228708913|gb|EEL61040.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|401126726|gb|EJQ34460.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|401166825|gb|EJQ74125.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|401187734|gb|EJQ94806.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|401248870|gb|EJR55191.1| chaperone ClpB [Bacillus cereus VD115]
gi|401250171|gb|EJR56475.1| chaperone ClpB [Bacillus cereus VD148]
gi|401628497|gb|EJS46338.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|402411864|gb|EJV44227.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|402421921|gb|EJV54165.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|402459103|gb|EJV90841.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|407385715|gb|AFU16216.1| Negative regulator of genetic competence [Bacillus thuringiensis
MC28]
Length = 811
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/734 (59%), Positives = 575/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKY 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IELQ+TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELQLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|423645099|ref|ZP_17620715.1| chaperone ClpB [Bacillus cereus VD166]
gi|401267794|gb|EJR73850.1| chaperone ClpB [Bacillus cereus VD166]
Length = 811
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/731 (59%), Positives = 572/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVAHENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|228937384|ref|ZP_04100030.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228970270|ref|ZP_04130929.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228976840|ref|ZP_04137252.1| Negative regulator of genetic competence [Bacillus thuringiensis
Bt407]
gi|384184166|ref|YP_005570062.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar chinensis CT-43]
gi|410672453|ref|YP_006924824.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis Bt407]
gi|423387432|ref|ZP_17364686.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
gi|423526620|ref|ZP_17503065.1| chaperone ClpB [Bacillus cereus HuB1-1]
gi|452196459|ref|YP_007476540.1| ATP-dependent Clp protease [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228782810|gb|EEM30976.1| Negative regulator of genetic competence [Bacillus thuringiensis
Bt407]
gi|228789379|gb|EEM37299.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228822217|gb|EEM68199.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326937875|gb|AEA13771.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar chinensis CT-43]
gi|401629015|gb|EJS46843.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
gi|402455660|gb|EJV87441.1| chaperone ClpB [Bacillus cereus HuB1-1]
gi|409171582|gb|AFV15887.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis Bt407]
gi|452101852|gb|AGF98791.1| ATP-dependent Clp protease [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 811
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/734 (59%), Positives = 574/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG +S PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSASNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|418577091|ref|ZP_13141221.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379324453|gb|EHY91601.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 820
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/730 (57%), Positives = 562/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLA I + +VP+T++GK+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLALAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYR +IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEALVSAA+
Sbjct: 317 LDEYRNNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+++ Q+ EK+ AV Q+F
Sbjct: 377 LSHRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q K T+ GD ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEANTNWK-----NTQNGD-NTSLSEEDIGEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHNRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+K+I +M+
Sbjct: 670 FAGFGGATEGQD--YESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKQIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL +DI + VTE +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQDINISVTEAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V +D D
Sbjct: 788 EGKEVKIDHD 797
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLETFEITEEKVV 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G E +GA
Sbjct: 62 EEVEKLIGHGQEQMGA 77
>gi|75760630|ref|ZP_00740659.1| Negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228898835|ref|ZP_04063117.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 4222]
gi|434378724|ref|YP_006613368.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-789]
gi|74491873|gb|EAO55060.1| Negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228860735|gb|EEN05113.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 4222]
gi|401877281|gb|AFQ29448.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-789]
Length = 811
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/734 (59%), Positives = 574/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEEAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|30018352|ref|NP_829983.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
ATCC 14579]
gi|228956523|ref|ZP_04118319.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229107768|ref|ZP_04237404.1| Negative regulator of genetic competence [Bacillus cereus Rock1-15]
gi|229125599|ref|ZP_04254631.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-Cer4]
gi|229142888|ref|ZP_04271329.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST24]
gi|296500916|ref|YP_003662616.1| genetic competence negative regulator ClpC/MecB [Bacillus
thuringiensis BMB171]
gi|423631991|ref|ZP_17607737.1| chaperone ClpB [Bacillus cereus VD154]
gi|423638085|ref|ZP_17613737.1| chaperone ClpB [Bacillus cereus VD156]
gi|423646217|ref|ZP_17621787.1| chaperone ClpB [Bacillus cereus VD169]
gi|423653016|ref|ZP_17628315.1| chaperone ClpB [Bacillus cereus VD200]
gi|29893892|gb|AAP07184.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
ATCC 14579]
gi|228640509|gb|EEK96898.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST24]
gi|228657791|gb|EEL13597.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-Cer4]
gi|228675617|gb|EEL30825.1| Negative regulator of genetic competence [Bacillus cereus Rock1-15]
gi|228803088|gb|EEM49910.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296321968|gb|ADH04896.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis BMB171]
gi|401262710|gb|EJR68848.1| chaperone ClpB [Bacillus cereus VD154]
gi|401271809|gb|EJR77812.1| chaperone ClpB [Bacillus cereus VD156]
gi|401287846|gb|EJR93613.1| chaperone ClpB [Bacillus cereus VD169]
gi|401303124|gb|EJS08687.1| chaperone ClpB [Bacillus cereus VD200]
Length = 811
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/731 (59%), Positives = 572/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|294630658|ref|ZP_06709218.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
gi|292833991|gb|EFF92340.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
Length = 841
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/758 (57%), Positives = 582/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAASGDTK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMIGKVDERLKDRDMGIELSQSAKELLAKKGYDPVLGARPLRRTIQREVEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDDKTFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|423421752|ref|ZP_17398841.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
gi|401096871|gb|EJQ04908.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
Length = 811
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/734 (59%), Positives = 573/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVKRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|398303898|ref|ZP_10507484.1| genetic competence negative regulator ClpC/MecB [Bacillus
vallismortis DV1-F-3]
Length = 810
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/736 (59%), Positives = 573/736 (77%), Gaps = 12/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + G+ G +S PTL+ +LT +A+E LDPV+GR +I+RV+++L
Sbjct: 140 QLLG--SNETGSSATGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 258 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V +PS DE+IQIL+GLR+RYE HH++ TD+A+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIQVDQPSADESIQILQGLRDRYEAHHRVSITDDAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEAGS+VRLR P +ELE++L ++ KEK+ AV+ Q+FE
Sbjct: 378 SDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ Q+ KE + G VT DI +V++WTG+PV K+
Sbjct: 438 KAASLRDTEQRLREQVEDTKKSWKE------KQGQENSEVTVDDIAMVVASWTGVPVSKI 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL ME LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 492 AQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG EEAMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT+LIMTSNVG+S +++ +
Sbjct: 612 SVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKR-NKY 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ ++ ++ +K V ELK+ FRPEF+NR+DE+IVF L K + EI +M
Sbjct: 671 VGFNV--QDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK +D+ +++T+ + +V EEG + YGARPLRRAI + +ED ++E++L I +
Sbjct: 729 QLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788
Query: 815 GDSVIVDVDSDGNVTV 830
G +++DV+ DG V
Sbjct: 789 GQHIVLDVE-DGEFVV 803
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L+ LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 KEVESLIGRGQE 73
>gi|398783815|ref|ZP_10547185.1| ATPase AAA [Streptomyces auratus AGR0001]
gi|396995722|gb|EJJ06732.1| ATPase AAA [Streptomyces auratus AGR0001]
Length = 841
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/758 (57%), Positives = 576/758 (75%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARETKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FE A LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEMAAGLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDEELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K SSY R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAAQGDTK-SSYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEDDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ ++++ + + + GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMIAKVDERLKDRDMGIELSGEAKSLLAKRGYDPVLGARPLRRTIQREIEDALSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VDV+ +G +L D P+
Sbjct: 789 SELRPGHIVVVDVEGEGETAKFTFRGEEKSALPDAPPI 826
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|289433587|ref|YP_003463459.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289169831|emb|CBH26369.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 820
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/737 (58%), Positives = 569/737 (77%), Gaps = 13/737 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EPSV+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPSVEESIQILHGLRDRYEAHHRVAITDEALDAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDEAGS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDEAGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E LK + KE + VTE + +V++WTGIPV K
Sbjct: 436 EKAAALRDKEHKLKKSLEETKANWKEKQGLDHSE------VTEDIVAEVVASWTGIPVAK 489
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 490 LAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVG 549
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++P
Sbjct: 550 KTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKP 609
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 610 YSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDK 668
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++
Sbjct: 669 SMGFNVTDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLT 726
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK
Sbjct: 727 AQLTKRLSERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIK 786
Query: 814 EGDSVIVDVDSDGNVTV 830
GD++ + V DG + V
Sbjct: 787 VGDTIEIGV-KDGKLEV 802
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGVSSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|423480226|ref|ZP_17456916.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
gi|401149231|gb|EJQ56706.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
Length = 811
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/734 (59%), Positives = 575/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE + G VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKE------KQGQENSEVTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|218895217|ref|YP_002443628.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
G9842]
gi|228905879|ref|ZP_04069776.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 200]
gi|228963182|ref|ZP_04124351.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402562827|ref|YP_006605551.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-771]
gi|423364494|ref|ZP_17341984.1| chaperone ClpB [Bacillus cereus VD022]
gi|423565560|ref|ZP_17541836.1| chaperone ClpB [Bacillus cereus MSX-A1]
gi|218542156|gb|ACK94550.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
G9842]
gi|228796440|gb|EEM43879.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228853694|gb|EEM98454.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 200]
gi|401072913|gb|EJP81367.1| chaperone ClpB [Bacillus cereus VD022]
gi|401193762|gb|EJR00765.1| chaperone ClpB [Bacillus cereus MSX-A1]
gi|401791479|gb|AFQ17518.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-771]
Length = 811
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/734 (59%), Positives = 574/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|418637208|ref|ZP_13199533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
lugdunensis VCU139]
gi|374839348|gb|EHS02862.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
lugdunensis VCU139]
Length = 819
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/730 (57%), Positives = 565/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
R+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 RYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + +G + N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG--SPEMGTKNAQTNKSNNTPTLDSLARDLTVIAKDGTLDPVIGRTKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIINNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV++TI+ILKGLR+RYE HH++ +D+AL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVEDTIEILKGLRDRYEAHHRINISDQALDAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRLR P + +E+E+ + KEK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLRSHTTPTNLKSIEQEIETVKKEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D KE A+ G +++ DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKKEWQNAQ---GGSNTELSQEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEATLHGRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAETMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +++
Sbjct: 670 FAGFGGASEGQD--YETIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMIV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI+++VT++ +E + EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTQRLSEQDIQIEVTDKAKEVIAEEGYDPEYGARPLIRAIQKTVEDNLSELILEGNQI 787
Query: 814 EGDSVIVDVD 823
EG +V +D D
Sbjct: 788 EGKAVTIDHD 797
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
T+V +++G E G
Sbjct: 62 TEVEKLIGHGQEQAG 76
>gi|229009591|ref|ZP_04166817.1| Negative regulator of genetic competence [Bacillus mycoides DSM
2048]
gi|229053928|ref|ZP_04195362.1| Negative regulator of genetic competence [Bacillus cereus AH603]
gi|423370664|ref|ZP_17348069.1| chaperone ClpB [Bacillus cereus VD142]
gi|423456297|ref|ZP_17433150.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|423473107|ref|ZP_17449849.1| chaperone ClpB [Bacillus cereus BAG6O-2]
gi|423526416|ref|ZP_17502865.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|423556922|ref|ZP_17533225.1| chaperone ClpB [Bacillus cereus MC67]
gi|423602389|ref|ZP_17578389.1| chaperone ClpB [Bacillus cereus VD078]
gi|423665405|ref|ZP_17640544.1| chaperone ClpB [Bacillus cereus VDM022]
gi|228721346|gb|EEL72867.1| Negative regulator of genetic competence [Bacillus cereus AH603]
gi|228751613|gb|EEM01413.1| Negative regulator of genetic competence [Bacillus mycoides DSM
2048]
gi|401073400|gb|EJP81822.1| chaperone ClpB [Bacillus cereus VD142]
gi|401130896|gb|EJQ38551.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|401163466|gb|EJQ70812.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|401194237|gb|EJR01229.1| chaperone ClpB [Bacillus cereus MC67]
gi|401225928|gb|EJR32472.1| chaperone ClpB [Bacillus cereus VD078]
gi|401290312|gb|EJR96007.1| chaperone ClpB [Bacillus cereus VDM022]
gi|402426605|gb|EJV58726.1| chaperone ClpB [Bacillus cereus BAG6O-2]
Length = 811
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/734 (58%), Positives = 575/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE + G VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKE------KQGQENSEVTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI D++ + V
Sbjct: 790 GQKVIFDIEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|15896437|ref|NP_349786.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337738395|ref|YP_004637842.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384459905|ref|YP_005672325.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|15026259|gb|AAK81126.1|AE007814_4 ATPases with chaperone activity clpC, two ATP-binding domain
[Clostridium acetobutylicum ATCC 824]
gi|325510594|gb|ADZ22230.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|336293592|gb|AEI34726.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 813
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/731 (57%), Positives = 560/731 (76%), Gaps = 7/731 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LL L+RE EGVA +L NLG D +R +++
Sbjct: 82 LTPRTKRLLEISLLEARNLNHNYINPEHVLLALIRESEGVAFTILGNLGVDFERLRKEIL 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ E G S+ + PTL +YGT+LT++A EGKLDPV+GR + +R+++IL
Sbjct: 142 DSLSGREENTGIKTSFSSNTSVTPTLNQYGTDLTQMALEGKLDPVIGRDNETQRILEILC 201
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIG+PGVGKTAIAEGLAQ+I G++P+ ++ K+VITLD+ LVAG+KYRGEF
Sbjct: 202 RRTKNNPCLIGDPGVGKTAIAEGLAQKIVEGNIPEILKDKRVITLDVSSLVAGSKYRGEF 261
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK+M EIK + +ILFIDE+HT++GAG AEGAIDA+NILKPSLARGE+QCIGATT
Sbjct: 262 EERLKKVMTEIKAAKNVILFIDEIHTIVGAGGAEGAIDASNILKPSLARGEIQCIGATTT 321
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
+EYR++IEKD ALERRFQPV V EPS +E +QIL+GLR++YE HH ++ TD+A+ +A L
Sbjct: 322 EEYRRYIEKDAALERRFQPVDVGEPSKEEAVQILEGLRDKYEAHHGVKITDDAIEAAVNL 381
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDLIDEA ++VR+++ P + + E+EL + T+EK++A+R QDFE
Sbjct: 382 STRYIQDRFLPDKAIDLIDEAAAKVRIQNLTAPPDLKNQEEELEKTTREKSDAIRLQDFE 441
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +LRD+E L+ I K S E +VT+ + +V+ WT IPVEK+
Sbjct: 442 KAAKLRDKEKKLRIAIEEFKKNWKNTSDNENY------IVTQKQVAAVVAKWTSIPVEKL 495
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E LHKRVIGQ+EAV+ +SRA+RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 496 TEKESERLLKLESILHKRVIGQEEAVEYVSRAVRRARVGLKDPKRPIGSFIFLGPTGVGK 555
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E +IR+DMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 556 TELSKALAEAMFGDENNIIRIDMSEYMEKHTVSRLVGSPPGYVGYDEGGQLTEKVRRKPY 615
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQIL+DGRLTDSKG+TV F NT++IMTSNVG+S I K +
Sbjct: 616 SVVLFDEIEKAHPDVFNILLQILDDGRLTDSKGKTVSFTNTIIIMTSNVGASTIRK-QKT 674
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF+ D Y+++K + EELK FRPEFLNR+DE++VF +L + ++++I +ML+
Sbjct: 675 LGFETAKDAVRQEYDKMKENIMEELKNSFRPEFLNRIDEIVVFHKLEEKDLRQIVKLMLE 734
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
V RLK ++I++ TE+ E + E+G++P+YGARPLRR I++ +ED ++E++L I +
Sbjct: 735 SVKGRLKEQNIKINFTEKAEEVLAEKGFDPTYGARPLRRTIIKAVEDKLSEEILKGTISK 794
Query: 815 GDSVIVDVDSD 825
D++ VDVD D
Sbjct: 795 NDNISVDVDKD 805
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RF+++A K+I AQEEA+ H Y+G+EH+LLG+LR+ G A +L N+G +R
Sbjct: 2 MFGRFSDRAQKMIYYAQEEAQNFKHGYVGTEHILLGILRDENGKAQSLLANMGVTIEKVR 61
>gi|229015484|ref|ZP_04172482.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|229021693|ref|ZP_04178275.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|423393465|ref|ZP_17370691.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
gi|228739561|gb|EEL89975.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|228745771|gb|EEL95775.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|401629572|gb|EJS47385.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
Length = 811
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/734 (59%), Positives = 573/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDEGRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVKRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|420213021|ref|ZP_14718362.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
gi|394277269|gb|EJE21595.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
Length = 817
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/730 (57%), Positives = 563/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E A+ G + ++E +I +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 814 EGDSVIVDVD 823
EG V +D D
Sbjct: 788 EGKEVTIDHD 797
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKESEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|251809941|ref|ZP_04824414.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875025|ref|ZP_06283900.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|417646131|ref|ZP_12296010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|417657343|ref|ZP_12307008.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|417911486|ref|ZP_12555191.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|417914018|ref|ZP_12557673.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|418326361|ref|ZP_12937547.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|418412965|ref|ZP_12986212.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
gi|418617569|ref|ZP_13180460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|418621530|ref|ZP_13184299.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|418624700|ref|ZP_13187370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|418629608|ref|ZP_13192105.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|418664665|ref|ZP_13226132.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|419770348|ref|ZP_14296428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|419772786|ref|ZP_14298812.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|420169340|ref|ZP_14675941.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|420171652|ref|ZP_14678190.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|420172258|ref|ZP_14678768.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|420182216|ref|ZP_14688354.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|420186453|ref|ZP_14692521.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|420188161|ref|ZP_14694175.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|420195785|ref|ZP_14701572.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|420203004|ref|ZP_14708590.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|420207055|ref|ZP_14712558.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|420208689|ref|ZP_14714147.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|420213834|ref|ZP_14719116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|420218208|ref|ZP_14723306.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|421607888|ref|ZP_16049122.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|251806484|gb|EES59141.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|281296353|gb|EFA88872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|329729477|gb|EGG65880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|329734648|gb|EGG70955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|341653063|gb|EGS76836.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|341653849|gb|EGS77614.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|365225772|gb|EHM67010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|374410321|gb|EHQ81080.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|374817996|gb|EHR82168.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|374826897|gb|EHR90773.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|374828761|gb|EHR92586.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|374833371|gb|EHR97059.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|383357294|gb|EID34769.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|383358879|gb|EID36321.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|394231370|gb|EJD77000.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|394237114|gb|EJD82609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|394242898|gb|EJD88275.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|394250200|gb|EJD95394.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|394252169|gb|EJD97210.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|394255421|gb|EJE00372.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|394262906|gb|EJE07658.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|394268877|gb|EJE13428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|394276375|gb|EJE20716.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|394281390|gb|EJE25639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|394284232|gb|EJE28386.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|394284688|gb|EJE28790.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|406656502|gb|EKC82907.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|410879558|gb|EKS27399.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
Length = 817
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/730 (57%), Positives = 563/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E A+ G + ++E +I +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 814 EGDSVIVDVD 823
EG V +D D
Sbjct: 788 EGKEVTIDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|302559271|ref|ZP_07311613.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
gi|302476889|gb|EFL39982.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
Length = 841
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/758 (57%), Positives = 580/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K ++Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++ ++ I
Sbjct: 671 K-GFNLGFAAAGDTK-TNYERMKNKVQDELKQHFRPEFLNRVDDVVVFPQLSQDDILRIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ +++++ +E + + GY+P GARPLRR I R +EDS++EK+L
Sbjct: 729 DLMIDKVDERLKDRDMGIELSQSAKELLSKRGYDPVLGARPLRRTIQREIEDSLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G+ +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGDTATFTFRGEEKSALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|423399355|ref|ZP_17376553.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|423409869|ref|ZP_17387018.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
gi|401644455|gb|EJS62145.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|401652409|gb|EJS69966.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
Length = 811
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/734 (59%), Positives = 573/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG ++ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSATNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+IQILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVNLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|416127894|ref|ZP_11597159.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|418328513|ref|ZP_12939624.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418631361|ref|ZP_13193825.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|418634140|ref|ZP_13196536.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|420178488|ref|ZP_14684819.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|420179587|ref|ZP_14685875.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|420191066|ref|ZP_14697002.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|420200939|ref|ZP_14706577.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|420203524|ref|ZP_14709086.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|420233736|ref|ZP_14738315.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
gi|319399727|gb|EFV87976.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|365231831|gb|EHM72848.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374835462|gb|EHR99072.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|374837442|gb|EHS01006.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|394246423|gb|EJD91681.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|394253576|gb|EJD98581.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|394258024|gb|EJE02919.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|394267420|gb|EJE12013.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|394274485|gb|EJE18901.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|394304910|gb|EJE48301.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
Length = 817
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/730 (57%), Positives = 563/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E A+ G + ++E +I +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 814 EGDSVIVDVD 823
EG V +D D
Sbjct: 788 EGKEVTIDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|422420829|ref|ZP_16497782.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria seeligeri FSL S4-171]
gi|313639760|gb|EFS04509.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
Length = 783
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/737 (57%), Positives = 569/737 (77%), Gaps = 13/737 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 42 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 101
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 102 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 158
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 159 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 218
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 219 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 278
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EPSV+E+IQIL GLR+RYE HH++ TD+AL +A +
Sbjct: 279 LDEYRKYIEKDAALERRFQPIKVDEPSVEESIQILHGLRDRYEAHHRVAITDQALDAAVR 338
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDEAGS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 339 LSDRYISDRFLPDKAIDVIDEAGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEF 398
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E LK + KE + VTE + +V++WTGIPV K
Sbjct: 399 EKAAALRDKEHKLKKSLEETKANWKEKQGLDHSE------VTEDIVAEVVASWTGIPVAK 452
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 453 LAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVG 512
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++P
Sbjct: 513 KTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKP 572
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 573 YSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDK 631
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++
Sbjct: 632 SMGFNVTDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLT 689
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK
Sbjct: 690 AQLTKRLSERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIK 749
Query: 814 EGDSVIVDVDSDGNVTV 830
GD++ + V DG + V
Sbjct: 750 VGDTIEIGV-KDGKLEV 765
>gi|291303744|ref|YP_003515022.1| ATPase AAA-2 domain-containing protein [Stackebrandtia nassauensis
DSM 44728]
gi|290572964|gb|ADD45929.1| ATPase AAA-2 domain protein [Stackebrandtia nassauensis DSM 44728]
Length = 854
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/740 (58%), Positives = 575/740 (77%), Gaps = 20/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLIKLGADLNRVRQQVL 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKM----PTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E GA GG +SG + P L+++G NLT+ A +GKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPAGATAGGSASGEQSQSSSPVLDQFGRNLTQAARDGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RR+KNNP LIGEPGVGKTA EGLAQ I G VP+T++ K + TLD+G LVAG+
Sbjct: 200 VMQVLSRRSKNNPVLIGEPGVGKTAAVEGLAQAIVKGSVPETLKDKHLYTLDLGALVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKHLEKDAALERRFQPIQVAEPSLSHTIEILKGLRDRYEAHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++ + Q K+K A+
Sbjct: 380 VAAATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAQARKDKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFE+A +LRD E L+ Q +E + E +AGD+ VTEVD I +++
Sbjct: 440 DAQDFERAAQLRDNEKQLQDQ--------REKREKEWKAGDLD-TVTEVDDEMIAEVLAN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLLKMEE LHKR+IGQ +AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVYKLTEEETSRLLKMEEELHKRIIGQHDAVKAVSQAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGKSEL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKSELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +VFN +LQILEDGRLTD +GR VDFKNT+LI+T+N+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEVFNTLLQILEDGRLTDGQGRIVDFKNTVLILTTNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
+ K +GF + +D Y R+K V +ELKQ+FRPEFLNR+D+ IVF +L++ E+
Sbjct: 671 KDVAK-AVSLGFQAETGGED-DYERMKLKVNDELKQHFRPEFLNRIDDTIVFPKLSENEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+I D+M+ + ++LK +D+ +++T+ +E + +GY+P GARPLRR I R +ED+++E
Sbjct: 729 IKIVDLMVARIEEQLKNRDMSMEITQAAKEFLGHKGYDPVLGARPLRRTIQREIEDTLSE 788
Query: 806 KMLAREIKEGDSVIVDVDSD 825
K+L E+ G V+VD + D
Sbjct: 789 KILFDELVPGQIVVVDCEGD 808
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|366163201|ref|ZP_09462956.1| ATPase AAA-2 [Acetivibrio cellulolyticus CD2]
Length = 810
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/731 (58%), Positives = 568/731 (77%), Gaps = 7/731 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ L+ EARR+GHNYIG+EHLL+G+L+EGE VA R+L +LG +P + ++V+
Sbjct: 80 FTPRTKRVLELSFREARRMGHNYIGTEHLLVGILKEGESVAVRILMDLGLEPQKLYSEVV 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+M E ++ + PTL ++G +LT +A E K DPV+GR +IERV+QIL
Sbjct: 140 KMFSEEAPGTSGVPKNNATSSNTPTLNQFGRDLTDMAREAKFDPVIGRDKEIERVIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ ++ K+V+TLD+ +VAG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEMLKDKRVVTLDLSSMVAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK +EEIK++ +ILFIDE+HT+IGAGAAEGAIDA+NILKPSLARGE+Q IGATTL
Sbjct: 260 EERLKKALEEIKKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEIQVIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQP+ V EPS +E I+ILKG+R++YE HH+++ TDEALV+A +L
Sbjct: 320 DEYRKHIEKDAALERRFQPITVGEPSKEEAIEILKGVRDKYEAHHRVKITDEALVAAVKL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI++RFLPDKAIDLIDEA SRVRL+ P + ++LE+++ ++ KEK +++ Q+FE
Sbjct: 380 SDRYITERFLPDKAIDLIDEAASRVRLKSFTAPPDLKQLEEQVEKLRKEKEDSIICQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD E LK ++ DK K + + + VTE ++ IV+ WTGIPV+++
Sbjct: 440 KAARIRDEEQRLKNEL----DKAKNDWQQKNQTTTD--TVTEEEVAGIVADWTGIPVKRL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RL+KMEETLH RVIGQ+EAVKAIS+AIRR RVGLK+P RP+ SFIF GPTGVGK
Sbjct: 494 AEEESERLMKMEETLHNRVIGQEEAVKAISKAIRRGRVGLKDPKRPVGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E ++ R+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 554 TELSKALAEALFGDENSITRIDMSEYMEKHSVSRLVGSPPGYVGYEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQILEDGRLTDS+GR VDF+NT++IMTSNVG+ +I + +R
Sbjct: 614 SVVLFDEIEKAHPDVFNILLQILEDGRLTDSQGRVVDFRNTVIIMTSNVGARLITE-PKR 672
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF EK +Y+ +K+ V ELK FRPEFLNR+DE+IVF L + +K I +M++
Sbjct: 673 LGFSSANAEKAKTYSDMKNNVMGELKNTFRPEFLNRVDEIIVFHPLEEEHLKSIVGLMIE 732
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RLK I L+VT+ + + ++G++ YGARPLRRAI ++ED +AE+ML ++
Sbjct: 733 SLAKRLKDNAIALEVTDDAKLLLAKKGFDQLYGARPLRRAIQSMVEDKLAEEMLEGRVRA 792
Query: 815 GDSVIVDVDSD 825
GD V+++ D
Sbjct: 793 GDKVVIESKED 803
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ RFTEKA K + L+QE A LGHNY+G+EHLLLGL++EG GVAA+VL+N G +
Sbjct: 1 MYGRFTEKAEKAVSLSQESAMTLGHNYVGTEHLLLGLIKEGSGVAAKVLQNQGITEDKVL 60
Query: 151 TQVIRMVG 158
++ ++G
Sbjct: 61 KEIEELIG 68
>gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX]
gi|71917007|gb|AAZ56909.1| ATPase [Thermobifida fusca YX]
Length = 830
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/736 (58%), Positives = 577/736 (78%), Gaps = 14/736 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + E AG S+ + L+++G NLT+ A EGKLDPV+GR +IERV+Q+
Sbjct: 140 QLLHGYQGKEPQAAGTAAESAPSTSLVLDQFGRNLTQAAREGKLDPVIGRDKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP L+G+PGVGKTA+ EGLAQ+I G++P+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLVGDPGVGKTAVVEGLAQKIVKGEIPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERL+K+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLRKVLKEIRSRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK++EKD ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKYLEKDAALERRFQPIQVEEPTISHTIEILKGLRDRYEAHHRVSITDGALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QL+ +YISDR+LPDKAIDLIDEAGSR+R+R P + RE ++++ ++ ++K A+ QD
Sbjct: 380 QLADRYISDRYLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAKVRRDKEAAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAWTGIP 510
FE+A LRD E L+AQ + + E +AGD+ V V E I +++ TGIP
Sbjct: 440 FERAAALRDEEKRLQAQ--------RAQKEKEWKAGDMDTVAEVNEELIAEVLATATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V +++ +ES RLL+MEE LHKRVIGQD+A+KA+S+AIRR R GLK+P RP SFIF+GP+
Sbjct: 492 VFRLTEEESSRLLRMEEELHKRVIGQDDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPS 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL KALA + FG E+A+I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTELCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDEIEKAH D+FN +LQ+LE+GRLTD++GR VDFKNT+++MT+N+G+ I K
Sbjct: 612 RKPFSVVLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDFKNTIIVMTTNLGTRDISK 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G+ +GF D+ ++Y+R+K+ V EELKQ+FRPEFLNR+D+ IVF QLT+ E+ I D
Sbjct: 672 -GQPMGF-ARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDTIVFHQLTQKEITAIVD 729
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+M+ + +RLK +D+ ++V ++ + E GY+P GARPLRR I R +ED+++EK+L
Sbjct: 730 LMVARLDERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRTIQREIEDALSEKILYG 789
Query: 811 EIKEGDSVIVDVDSDG 826
E+K G VIVD + +G
Sbjct: 790 ELKSGQIVIVDAEGEG 805
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|325288483|ref|YP_004264664.1| ATPase AAA [Syntrophobotulus glycolicus DSM 8271]
gi|324963884|gb|ADY54663.1| ATPase AAA-2 domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 841
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/731 (58%), Positives = 571/731 (78%), Gaps = 15/731 (2%)
Query: 101 KVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG-- 158
+VI +A EEA+R G NY+G+EH+LLG+L EGEG+AARVL +L +P + V+ ++G
Sbjct: 85 RVIEIATEEAQRQGVNYVGTEHVLLGILIEGEGIAARVLADLKVNPEKLWEHVVALLGGE 144
Query: 159 -ESTEAVGAG---VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
E+T G+ GG + + P L E+G +LT +A+E KLDPV+GR+ +IERV+Q+L
Sbjct: 145 AENTSVPGSSPGMTGGKNVSSNTPALNEFGRDLTVMAQEKKLDPVIGREKEIERVIQVLS 204
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI SG VP+ + K+V+TLD+ +VAGTKYRGEF
Sbjct: 205 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGGVPEILADKRVVTLDLSSMVAGTKYRGEF 264
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EER+KK+MEEI+ + II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+QC+GATTL
Sbjct: 265 EERMKKVMEEIRFAGNIIIFIDELHTLIGAGAAEGAIDAANILKPALARGEMQCVGATTL 324
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IE+D ALERRFQP+K+ EP+V+E I+ILKGLR+RYE HH+++ TDEA+ +A +L
Sbjct: 325 DEYRKYIERDSALERRFQPIKIGEPTVEEAIEILKGLRDRYEAHHRVKITDEAIEAAVRL 384
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEA S+VRL P E +ELE E+ + KEK AV+ Q+FE
Sbjct: 385 SDRYISDRFLPDKAIDLMDEAASKVRLSSYTAPGELKELETEVEALKKEKEAAVKRQEFE 444
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A ++RD+E + Q+S L K E ++ + + ++ + DI IVS+WTGIPV K+
Sbjct: 445 QAAKIRDQEQQKREQLSTL-RKDWEANREKNLS-----ILNQEDIGKIVSSWTGIPVNKL 498
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ES RLLK+EE LH+RV+GQ+EAV A++R++RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 499 EEEESARLLKLEEVLHERVVGQEEAVSAVARSVRRARAGLKDPKRPIGSFIFLGPTGVGK 558
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E ++IR+DMSE+ME+H VS+++GSPPGYVG+ EGGQLTEAVRR+PY
Sbjct: 559 TELARALAEALFGDENSLIRVDMSEYMEKHAVSRMVGSPPGYVGHDEGGQLTEAVRRKPY 618
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+N +L+MTSNVG+S + K
Sbjct: 619 SVLLFDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNCVLMMTSNVGASFLRKEA-- 676
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + E DS Y + + V EELK+ F+PEFLNR+DE++VF QL E+++IA I+L
Sbjct: 677 MGFMSSHSE-DSEYRNMSANVMEELKKVFKPEFLNRIDEIVVFHQLKDEELQKIAAILLA 735
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ RL+ ++ + E+ + V +EG +P++GARPLRRAI RL+ED ++E++L + K
Sbjct: 736 SLGKRLQQQNYTIIADEKAMQLVAKEGNDPAFGARPLRRAIQRLIEDPLSERILQEQFKP 795
Query: 815 GDSVIVDVDSD 825
GD++ V +++
Sbjct: 796 GDTIYVSAENN 806
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
RFT+KA +V +LA+ A+R+GH IG+EH+LL LL EGEGVAA L+ +G D + ++
Sbjct: 4 RFTQKAEQVFLLAESTAKRMGHKTIGTEHILLALLEEGEGVAATALKEMGLDEEKMSGKI 63
Query: 154 IRMVGESTEAVGAGVG 169
I+++G S E + VG
Sbjct: 64 IQLIGIS-EPIAGEVG 78
>gi|229040987|ref|ZP_04189750.1| Negative regulator of genetic competence [Bacillus cereus AH676]
gi|228727284|gb|EEL78478.1| Negative regulator of genetic competence [Bacillus cereus AH676]
Length = 811
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/731 (59%), Positives = 571/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS++E+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVFITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVSRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/745 (57%), Positives = 558/745 (74%), Gaps = 11/745 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +E+R+LGH YIG+EH+LL L+REGEGVAARVL N G + R QV+
Sbjct: 81 YTPRAKKVIELSVDESRKLGHTYIGTEHILLALIREGEGVAARVLNNAGVSLNKARQQVL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G + PTL+ +LT++A EG LDPV+GR +I RV+++L
Sbjct: 141 QLLGNHDTNTNGNNTNAAPTASTPTLDSLARDLTQIAREGSLDPVIGRSKEITRVIEVLS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+ + K+V+TLDMG +VAGTKYRGEF
Sbjct: 201 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMTLDMGTVVAGTKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 261 EDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EP+ +E +QI++GLR+RYE HH+++ TDEA+ +A QL
Sbjct: 321 DEYRKYIEKDAALERRFQPIQVDEPTPEEAVQIIRGLRDRYEAHHRVKITDEAVEAAVQL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDL+DEAGS+VRLR P +ELE++L + EKN AV+ Q+FE
Sbjct: 381 SNRYISDRFLPDKAIDLMDEAGSKVRLRSYTTPPNLKELEQKLEAVKAEKNAAVQSQEFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
KA LRD E +K ++ + KE ++E+E VT DI +V+ WTGIPV K
Sbjct: 441 KAANLRDSEQKIKEELETTKKEWKEKQGRSESE-------VTVNDIAEVVAMWTGIPVAK 493
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ +ES +LL +E+ LHKRV+GQ EAV+AISRAIRRAR GLK+P RPI SFIF GPTGVG
Sbjct: 494 IAQEESAKLLNLEDELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVG 553
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E++MIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+P
Sbjct: 554 KTELARALAEVMFGDEDSMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKP 613
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFN++LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 614 YSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFRNTVVIMTSNIGAEAL-KYRK 672
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF E S K ++ EELK+ FRPEFLNR+DE IVF L K E+ EI M
Sbjct: 673 SVGF--GAQETSKSEANAKDVMLEELKKAFRPEFLNRIDETIVFHSLKKDELAEIVGKMS 730
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++IEL++T+ +++ EGY+P YGARP+RRA+ + +ED ++E++L +
Sbjct: 731 DQLTKRLSEQNIELELTKAALDKIAAEGYDPEYGARPIRRALQKHVEDRLSEEILKGTVL 790
Query: 814 EGDSVIVDVDSDGNVTVLNGSSGAP 838
G V+ D D S P
Sbjct: 791 TGQVVVFDYKDDEFTVTTKKSKKEP 815
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF FT++A KV+ LAQEEA R+ H+ IG+EH+LLGL+REG G+AA+ LE + P I
Sbjct: 2 MFNHFTQRAQKVLQLAQEEAIRMKHDAIGTEHILLGLIREGGGIAAKALEAIEVTPEVIE 61
Query: 151 TQVIRMVGESTEAVG 165
+ ++VG T+ VG
Sbjct: 62 EGIEKLVGVGTKDVG 76
>gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57866102|ref|YP_187761.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242241856|ref|ZP_04796301.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|293367900|ref|ZP_06614538.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417658249|ref|ZP_12307885.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|417910375|ref|ZP_12554097.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|418604270|ref|ZP_13167628.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|418606457|ref|ZP_13169734.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|418609533|ref|ZP_13172675.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|418611880|ref|ZP_13174943.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|418626332|ref|ZP_13188945.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|420166780|ref|ZP_14673460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|420175670|ref|ZP_14682104.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|420193494|ref|ZP_14699346.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|420196769|ref|ZP_14702508.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|420218753|ref|ZP_14723807.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|420222653|ref|ZP_14727570.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|420225510|ref|ZP_14730340.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|420226413|ref|ZP_14731197.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|420228732|ref|ZP_14733449.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|420231100|ref|ZP_14735755.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
gi|81675398|sp|Q5HRM8.1|CLPC_STAEQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81843102|sp|Q8CQ88.1|CLPC_STAES RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|27314747|gb|AAO03884.1|AE016744_287 endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57636760|gb|AAW53548.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242234634|gb|EES36946.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|291317929|gb|EFE58337.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329738043|gb|EGG74264.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|341650550|gb|EGS74370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|374405287|gb|EHQ76229.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|374406860|gb|EHQ77735.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|374407864|gb|EHQ78709.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|374821395|gb|EHR85458.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|374832889|gb|EHR96592.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|394232700|gb|EJD78313.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|394242848|gb|EJD88226.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|394259936|gb|EJE04764.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|394267271|gb|EJE11872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|394288915|gb|EJE32813.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|394291827|gb|EJE35612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|394293577|gb|EJE37291.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|394298789|gb|EJE42351.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|394300195|gb|EJE43711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|394303175|gb|EJE46603.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
Length = 817
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/730 (57%), Positives = 563/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E A+ G + ++E +I +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 814 EGDSVIVDVD 823
EG V +D D
Sbjct: 788 EGKEVTIDHD 797
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VL + +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLVSFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|377574374|ref|ZP_09803404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377536930|dbj|GAB48569.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 880
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/764 (57%), Positives = 586/764 (76%), Gaps = 24/764 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL+ LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLQKLGADLNRVRQQVI 139
Query: 155 RMVGE---STEAVGAGVGGGS-SGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+++ E AGVGG S SG P L+++G NLT+ A EGKLDPV+GR +I
Sbjct: 140 QLLSGYQGGKETAAAGVGGQSTSGEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGRAQEI 199
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVA
Sbjct: 200 ERVMQVLSRRTKNNPILIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKHIYTLDLGALVA 259
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGEL
Sbjct: 260 GSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTLDEYRKHIEKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD
Sbjct: 320 QTIGATTLDEYRKHIEKDPALERRFQPIQVAEPTLSHAIEILKGLRDRYEAHHRVSITDG 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
ALV+AA ++ +YI+DR+LPDKAIDLIDEAG+R+R++ P + RE ++++ + +EK
Sbjct: 380 ALVAAANMADRYINDRYLPDKAIDLIDEAGARLRIKRMTAPPDLREFDEKIAHVRREKEA 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIV 503
A+ GQDFEKA +LRD E L I A K + E +AGD+ VV EV+ I ++
Sbjct: 440 AIDGQDFEKAAKLRDDEKQL---IEA-----KNTREKEWKAGDM-DVVAEVNEDLIAEVL 490
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
+A TGIPV K++ +ES RLL ME+ LHKR++G D+A+KA+S+AIRR R GLK+P RP S
Sbjct: 491 AASTGIPVFKLTEEESTRLLNMEDELHKRIVGNDDAIKALSQAIRRTRAGLKDPRRPGGS 550
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF+GPTGVGK+ELAKALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGG
Sbjct: 551 FIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEFAEKHTVSRLFGSPPGYVGYEEGG 610
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
QLTE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+
Sbjct: 611 QLTEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 670
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ I K +GF D ++ S+Y R+K+ V +ELKQ+FRPEFLNR+D+++VF QL++
Sbjct: 671 GTRDISK-SVSLGFAPDGNQG-SNYERMKNKVQDELKQHFRPEFLNRVDDIVVFPQLSED 728
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ +I D+M+ + +RLK KD+ +++T ++ + + GY+P GARPLRRAI R +ED +
Sbjct: 729 EIVQIVDLMVGRLDERLKDKDMGVELTPAAKKLLAKRGYDPVLGARPLRRAIQRDIEDML 788
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLAD-PLP 846
+EK+L EI G+ V VDV+ +G+ G + D PLP
Sbjct: 789 SEKILYGEIGSGELVSVDVEGEGDSATFT-FQGTKKDFGDAPLP 831
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVEEIIGKGQQA 73
>gi|242372741|ref|ZP_04818315.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
gi|242349514|gb|EES41115.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
Length = 818
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/728 (57%), Positives = 562/728 (77%), Gaps = 11/728 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVVGRNKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKEKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ + EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIENVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E ++ G V ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKNEWKNSQ---GGVSTSLSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES+RLL +E+TLH+RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESERLLNLEDTLHERVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGND--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTARLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 814 EGDSVIVD 821
EG V +D
Sbjct: 788 EGKEVTID 795
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|163938089|ref|YP_001642973.1| ATPase [Bacillus weihenstephanensis KBAB4]
gi|229131089|ref|ZP_04260001.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST196]
gi|229165070|ref|ZP_04292865.1| Negative regulator of genetic competence [Bacillus cereus AH621]
gi|423485381|ref|ZP_17462063.1| chaperone ClpB [Bacillus cereus BtB2-4]
gi|423491106|ref|ZP_17467750.1| chaperone ClpB [Bacillus cereus CER057]
gi|423502098|ref|ZP_17478715.1| chaperone ClpB [Bacillus cereus CER074]
gi|423514654|ref|ZP_17491161.1| chaperone ClpB [Bacillus cereus HuA2-1]
gi|423514934|ref|ZP_17491415.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|423596971|ref|ZP_17572981.1| chaperone ClpB [Bacillus cereus VD048]
gi|423671531|ref|ZP_17646535.1| chaperone ClpB [Bacillus cereus VDM034]
gi|423672665|ref|ZP_17647604.1| chaperone ClpB [Bacillus cereus VDM062]
gi|163860286|gb|ABY41345.1| ATPase AAA-2 domain protein [Bacillus weihenstephanensis KBAB4]
gi|228618333|gb|EEK75363.1| Negative regulator of genetic competence [Bacillus cereus AH621]
gi|228652302|gb|EEL08227.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST196]
gi|401151492|gb|EJQ58943.1| chaperone ClpB [Bacillus cereus CER074]
gi|401162031|gb|EJQ69390.1| chaperone ClpB [Bacillus cereus CER057]
gi|401168435|gb|EJQ75698.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|401218148|gb|EJR24832.1| chaperone ClpB [Bacillus cereus VD048]
gi|401291920|gb|EJR97585.1| chaperone ClpB [Bacillus cereus VDM034]
gi|401311525|gb|EJS16820.1| chaperone ClpB [Bacillus cereus VDM062]
gi|402441572|gb|EJV73522.1| chaperone ClpB [Bacillus cereus BtB2-4]
gi|402442054|gb|EJV73998.1| chaperone ClpB [Bacillus cereus HuA2-1]
Length = 811
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/734 (58%), Positives = 574/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE + G VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKE------KQGQENSEVTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVKRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI D++ + V
Sbjct: 790 GQKVIFDIEGESFV 803
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|336180205|ref|YP_004585580.1| ATPase AAA-2 domain-containing protein [Frankia symbiont of Datisca
glomerata]
gi|334861185|gb|AEH11659.1| ATPase AAA-2 domain protein [Frankia symbiont of Datisca glomerata]
Length = 834
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/761 (58%), Positives = 579/761 (76%), Gaps = 21/761 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G + A G S G +L +++G NLT A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKGDPATAGAPSEGTPSTSLVLDQFGRNLTAAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDGALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+ Q
Sbjct: 380 ASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTG 508
DFEKA LRDRE L A+ K + E +AGD+ VV EV +I +++ WTG
Sbjct: 440 DFEKAASLRDREKTLLAE--------KAKREKEWKAGDMD-VVAEVGDEEIAEVLAIWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LH+RVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEETARLLRMEDELHRRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTER 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
KG IGF D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +I
Sbjct: 671 SKGP-GIGFATGQGAID--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSEAEIIQI 727
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML V +LK KD+ L++T + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 728 VDLMLARVDIQLKNKDMALELTPAAKALLAKKGYDPVLGARPLRRTIQREIEDVLSEKIL 787
Query: 809 AREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLPV 847
+K G+ V+ DV+ +G V G P + D P+
Sbjct: 788 YGTLKPGEIVVGDVEGEGEAAKFVFRGEP-KPTQVPDAPPI 827
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/762 (57%), Positives = 580/762 (76%), Gaps = 20/762 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGLLREGEG A +VL L A+PS +R +VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLLREGEGTAVKVLSRLKAEPSAVRQEVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+ A GG S G +L +++G NLT+ A +GKLDPV+GR+ + ERV+Q+
Sbjct: 140 ERLSGYQGKEPANAGGPSEGQPSGSLVLDQFGRNLTQAARDGKLDPVIGRESEAERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGK+A+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKSAVVEGLAQSIVAGDVPETLKDKQLYTLDLGSLVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TL+EYRKHIEKD ALERRFQP++V EPSV T++ILKGLR+RYE HHK+ TD ALV+AA
Sbjct: 320 TLEEYRKHIEKDAALERRFQPIQVDEPSVAHTVEILKGLRDRYEAHHKVTITDSALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +Y++DRFLPDKAIDLIDEAG+R+R+R P E +E + + + K+K EA+ GQD
Sbjct: 380 NLADRYVNDRFLPDKAIDLIDEAGARLRIRRLTAPPELKEFDSRIEEARKKKEEAIDGQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FE A LRD E LK++ +K K E++A V V EV I +++A TGIP+
Sbjct: 440 FELAANLRDEEQKLKSERD---EKEKAWRHGESDA--VTTVSEEV-IAEVLAASTGIPIV 493
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +ES RLL ME+ LHKRVIGQDEA+KAISRAIRR R GLK+P RP SFIF+GPTGV
Sbjct: 494 KLTEEESSRLLNMEDELHKRVIGQDEAIKAISRAIRRTRAGLKDPKRPGGSFIFAGPTGV 553
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELAKALA + FG EEA+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+
Sbjct: 554 GKTELAKALAEFLFGDEEALIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRK 613
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG- 691
P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG
Sbjct: 614 PFSVVLFDEVEKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDIAKGV 673
Query: 692 --GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
G G DL D Y R+KS V EELKQ+F+PEFLNR+D+++VF QL++ E+ +I
Sbjct: 674 SMGFTAGGDLSTD-----YERMKSKVHEELKQHFKPEFLNRVDDVVVFPQLSRTEIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ + ++ RL+ +D+ L++T+ ++ + E+GY+P GARPLRR I R +EDS++E++L
Sbjct: 729 DLEVAKLSRRLQDRDMTLELTQPAKDLLAEKGYDPVLGARPLRRTIQRDIEDSLSERILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLN----GSSGAPESLADPLPV 847
+++ GD ++VD + +G + L G G+ E ++D + V
Sbjct: 789 GQVQVGDQIVVDAEGEGLLGDLTFARRGEDGSLEPISDVVDV 830
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EH+LLGL+ E EGV A+ LE LG +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARLLNHNYIGTEHILLGLIHENEGVGAKALEALGVTLDAVR 60
Query: 151 TQVIRMVGESTE 162
QV ++GE +
Sbjct: 61 EQVRDIIGEGNQ 72
>gi|423614628|ref|ZP_17590485.1| chaperone ClpB [Bacillus cereus VD107]
gi|401237472|gb|EJR43924.1| chaperone ClpB [Bacillus cereus VD107]
Length = 811
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/734 (58%), Positives = 574/734 (78%), Gaps = 10/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARESRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+++E++QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH R+IGQ+EAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRLIGQEEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSDGNV 828
G VI DV+ + V
Sbjct: 790 GQKVIFDVEGESFV 803
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|442803766|ref|YP_007371915.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739616|gb|AGC67305.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 810
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/732 (56%), Positives = 567/732 (77%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T + +V+ LA E RR+G N+IG+EH++L +LREGE VA R+L LG D + + +I
Sbjct: 80 YTPRTKRVMELAYAETRRMGQNFIGTEHIMLAILREGESVAVRILMELGVDINKLYDSLI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
M+ E T A + + PTL+++G +LT +A EGK+DPV+GR +IER++QIL
Sbjct: 140 TMLQEDTPAAVVANKPRAEEIQTPTLDQFGRDLTAMAREGKIDPVIGRDKEIERIIQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAI EGLAQ+I G++P+ ++GK+V+ LD+ +VAG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAICEGLAQKIIEGNIPEILKGKRVVALDLSSMVAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK +EE++ + +ILFIDE+HT++GAGAAEGAIDA+NILKP LARGE+Q IGATT+
Sbjct: 260 EERLKKSIEEVRNAGNVILFIDELHTIVGAGAAEGAIDASNILKPLLARGEIQVIGATTI 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+++ EP+ +E I+ILKG+R++YE HH ++ TD+A+ +A +L
Sbjct: 320 DEYRKYIEKDAALERRFQPIQIGEPTQEEAIEILKGIRDKYEAHHNVKITDKAIEAAVRL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRL+ P + +ELE+++ Q+ K K +A+ Q+FE
Sbjct: 380 SVRYITDRFLPDKAIDLIDEAASKVRLKSFIAPPDLKELEQKIEQVHKMKEDAIINQEFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E LK Q+++L +K + ++ ET++ VTE +I +VS+WTGIPV ++
Sbjct: 440 KAASLRDQENALKEQMNSLKEKWRMKNQTETQS------VTEEEIAEVVSSWTGIPVSRL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +E+++L +E LHKRVIGQDEAVKA+++AIRR RVGLK+P RP+ SFIF GPTGVGK
Sbjct: 494 AQEETEKLKNLENVLHKRVIGQDEAVKAVAKAIRRGRVGLKDPKRPVGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E MIRLDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 554 TELSKALAEALFGDESHMIRLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTEKVRRKPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-SVIEKGGR 693
+VVLFDEIEKAHPDVFN++LQIL+DGRLTD+ GR VDF+NT++IMTSN+G+ ++E R
Sbjct: 614 SVVLFDEIEKAHPDVFNILLQILDDGRLTDASGRLVDFRNTVIIMTSNIGARDIVEP--R 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
++GF + + Y +K V ELK+ FRPEFLNR+DE+IVF LT+ + +IA +ML
Sbjct: 672 KLGFSAALENEAKDYEEMKKNVMNELKKTFRPEFLNRVDELIVFHPLTRENINDIAGLML 731
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
EV RLK +I L ++ +E + E+GY+ YGARPLRR I L+ED +AE+ML +I+
Sbjct: 732 NEVAKRLKNVNITLIADDQVKEFLAEKGYDKVYGARPLRRTIQNLVEDRIAEEMLDGKIR 791
Query: 814 EGDSVIVDVDSD 825
EGD+V + +++D
Sbjct: 792 EGDTVKIVLNND 803
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
++ RFT++A + + LA+E + LGHNYIG+EH+L GL++EG G+AA VL + G +
Sbjct: 2 IYGRFTQRAAQALNLARECSNSLGHNYIGTEHILWGLVKEGGGIAANVLISNGVTADRVL 61
Query: 151 TQVIRMVG 158
+++ +VG
Sbjct: 62 EKILSIVG 69
>gi|359775853|ref|ZP_09279175.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
gi|359306869|dbj|GAB13004.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
Length = 830
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/740 (59%), Positives = 572/740 (77%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVG-----GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++ + E+ GAGVG G +G+ + L+++G NLT+ A E KLDPV+GR+ ++E
Sbjct: 140 QLLSGYQGKESTGAGVGQSQAEGTPAGSVV--LDQFGRNLTQAARENKLDPVIGREQEME 197
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG
Sbjct: 198 RVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAG 257
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 258 SRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQ 317
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD A
Sbjct: 318 TIGATTLDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGA 377
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
L SAA LS +YISDRFLPDKAIDLIDEAG+R+R+R P E +E+++ + ++ EK A
Sbjct: 378 LASAANLSERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKEMDERISELKMEKESA 437
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFE A LRD+E L + ++ ++ +T D V E I +++ T
Sbjct: 438 IDAQDFEGAAALRDKEQKL------ITERSEKERHWKTGGMDDISEVDEDLIAEVLANST 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLLKME+ LHKRV+GQDEA+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESSRLLKMEDELHKRVVGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE
Sbjct: 552 GPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 612 KVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ E
Sbjct: 672 ISK-SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIE 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ + + RLK KD+ +++T+ + + GY+P+ GARPLRR I R +ED ++EK+
Sbjct: 730 IVDLFVTRLEKRLKDKDMGIELTKAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+ GD V+VDVD +G+
Sbjct: 790 LFGELHPGDIVVVDVDGEGD 809
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEIIGQGQQA 73
>gi|428223611|ref|YP_007107708.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983512|gb|AFY64656.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/814 (55%), Positives = 599/814 (73%), Gaps = 26/814 (3%)
Query: 31 RNVKMMSYMQPSASRIS-SFSGLRR---------SNALDTFTCDFHSTVAVSLSSRRGKS 80
R V ++ + Q A R+ SF G + S+ D T A + G
Sbjct: 8 RAVAVIVFAQEEARRLGHSFIGTEQILLGVLRVESSPAARLLTDMGVTAAAARREVEGII 67
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR G V + T + +V A + ++ Y+ EH+LL L++ G+ VAA+VL
Sbjct: 68 GRGSGIVPADIPP--TPRTRQVFEQALQGVQQESQAYVTPEHILLSLVQAGDSVAAKVLT 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMP---TLEEYGTNLTKLAEEGKLD 197
NLG D + +R ++ ++ + E A S+ P LE +G NLT A G+LD
Sbjct: 126 NLGVDLAEVRDRLQALMADPAEMAFAQ-PSRSAQTAAPMGRALETFGINLTMRAIAGELD 184
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
P+VGR+ ++ERVVQILGRRTKNNP L+G+PGVGKTAIAEGLAQRI +GDVP+ + +++I
Sbjct: 185 PMVGREAEVERVVQILGRRTKNNPILLGDPGVGKTAIAEGLAQRIVNGDVPEILRDRQII 244
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+L MG L+AG ++RGEFEERL +++ E++Q+ +I+FIDE+H+L+GAGA G +DA+N+L
Sbjct: 245 SLAMGTLMAGARFRGEFEERLTQILAEVRQAGNVIVFIDEIHSLVGAGATAGGLDASNLL 304
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGELQCIGATTLDEYR+HIE+D ALERRFQPVKV P++ ETI+IL GLR+RYE
Sbjct: 305 KPALARGELQCIGATTLDEYRQHIEQDAALERRFQPVKVEAPTLTETIEILWGLRDRYEQ 364
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH L ++EALV+AA+LS +YI DR LPDKAIDLIDEAGSRVRLRH + A+ + ++L
Sbjct: 365 HHHLTISNEALVAAARLSDRYIPDRHLPDKAIDLIDEAGSRVRLRHTR-HSPAQRIRQDL 423
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
R +T EK AV QDF++AG+LRDRE+ L+ ++ ++ A+ +A + PVVT
Sbjct: 424 RAVTAEKEAAVTAQDFDQAGKLRDRELALQQTLA-------DLRTAQRDA-EPRPVVTAE 475
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
DI ++SAWTGIPV ++ ES L+ +E+TLH+RVIGQ EAV A +RAIRR+RVGL +P
Sbjct: 476 DIAQVISAWTGIPVNHLTESESLMLMHLEDTLHERVIGQQEAVTAAARAIRRSRVGLGSP 535
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
+RPIAS +FSGPTGVGK+ELAKALAA FGSEEAMIRLDMSEFME HTVSKLIGSPPG+V
Sbjct: 536 HRPIASLLFSGPTGVGKTELAKALAATVFGSEEAMIRLDMSEFMEAHTVSKLIGSPPGFV 595
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTEAVRR+PYTV+L DEIEKAHPDVFN++LQ+LEDGRLTD++GR V FKNTL+
Sbjct: 596 GYDEGGQLTEAVRRKPYTVLLLDEIEKAHPDVFNLLLQLLEDGRLTDARGRVVSFKNTLI 655
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSS-YNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
I+TSN+GS IEK G +GF DE +++ Y R++S V EELKQYFRPEFLNRLDE+IV
Sbjct: 656 ILTSNLGSRAIEKNGLGLGFAATGDEAETAQYQRVRSQVNEELKQYFRPEFLNRLDEIIV 715
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
FR+LT+ E+ ++A+++++EV DRL + I L +T+ + R+++EGY+PSYGARPLRRA+
Sbjct: 716 FRRLTRDELAQVAELLIREVGDRLSEQGITLVLTDAVKHRLIDEGYSPSYGARPLRRAVT 775
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
RL+ED +AE MLA ++ GD+ ++D+D DG V V
Sbjct: 776 RLVEDHLAEAMLAGQLHSGDTAVLDLDDDGQVQV 809
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE FT++A+ VI+ AQEEARRLGH++IG+E +LLG+LR AAR+L ++G + R
Sbjct: 1 MFEYFTDRAVAVIVFAQEEARRLGHSFIGTEQILLGVLRVESSPAARLLTDMGVTAAAAR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
+V ++G + V A +
Sbjct: 61 REVEGIIGRGSGIVPADI 78
>gi|379794996|ref|YP_005324994.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356871986|emb|CCE58325.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 818
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/730 (57%), Positives = 564/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + + N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQATKANNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K T+ G + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF DE+D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDEQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIVVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNKI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVV 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|16799341|ref|NP_469609.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|423099292|ref|ZP_17086999.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|16412693|emb|CAC95497.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|370794190|gb|EHN61972.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 820
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/739 (58%), Positives = 574/739 (77%), Gaps = 17/739 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREENLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L ++ KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSELKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
EKA LRD+E LK K E +KA + + G VTE + +V++WTGIPV
Sbjct: 436 EKAAALRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPV 487
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTG
Sbjct: 488 AKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTG 547
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR+
Sbjct: 548 VGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQ 607
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQ 666
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I +
Sbjct: 667 DKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTL 724
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
+ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 725 LTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGN 784
Query: 812 IKEGDSVIVDVDSDGNVTV 830
IK GD+V + V DG + V
Sbjct: 785 IKVGDNVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|417643008|ref|ZP_12293079.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
warneri VCU121]
gi|445060498|ref|YP_007385902.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
gi|330686262|gb|EGG97874.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU121]
gi|443426555|gb|AGC91458.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
Length = 817
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/732 (57%), Positives = 562/732 (76%), Gaps = 11/732 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDSLARDLTIIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++T+ ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTVSILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+++ ++ EK+ AV Q+F
Sbjct: 377 LSHRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQQIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K V ++E DI +++ WTGIP+ +
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNSQDG------VSTSLSEEDIAEVIAGWTGIPLTR 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHDRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGADDGQD--YESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I ++VTE+ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTLRLSEQNINIKVTEKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQL 787
Query: 814 EGDSVIVDVDSD 825
EG V VD D +
Sbjct: 788 EGKEVTVDHDGE 799
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 62 EEVEKLIG 69
>gi|430748562|ref|YP_007211470.1| chaperone ATPase [Thermobacillus composti KWC4]
gi|430732527|gb|AGA56472.1| ATPase with chaperone activity, ATP-binding subunit [Thermobacillus
composti KWC4]
Length = 818
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/745 (58%), Positives = 575/745 (77%), Gaps = 11/745 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S+EA+ + G ++ N PTL+ +LT A +G LDPV+GR +IERV+Q+L
Sbjct: 140 QLLG-SSEAISSSHGAPTNVN-TPTLDGLARDLTAAARDGNLDPVIGRSKEIERVIQVLS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQRI + ++P+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 198 RRTKNNPVLIGEPGVGKTAIAEGLAQRIVANEIPETLRDKRVMTLDMGSVVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATTL
Sbjct: 258 EDRLKKIMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTL 317
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V +P+ +E IQIL GLR+RYE HH+++ TDEA+ +A +L
Sbjct: 318 DEYRKYIEKDAALERRFQPIMVEQPTPEEAIQILHGLRDRYEAHHRVKITDEAIEAAVKL 377
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEAGS+VRL +P ++LE L +I KEK+ AV+ Q+FE
Sbjct: 378 SDRYITDRFLPDKAIDLIDEAGSKVRLHSYTVPPNLKQLEARLEEIRKEKDAAVQSQEFE 437
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E ++ ++ + KE + G VT DI +VS+WTGIPV K+
Sbjct: 438 KAAALRDTEQKIREELETTKNMWKE------KQGRTDSEVTPEDIAQVVSSWTGIPVSKL 491
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+E++RLLKMEE LH RVIGQDEAVKA++RAIRRAR GLK+P RP+ SFIF GPTGVGK
Sbjct: 492 KEEETERLLKMEEILHSRVIGQDEAVKAVARAIRRARAGLKDPKRPMGSFIFLGPTGVGK 551
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E A+IR+DMSE+ME+H+ S+L+G+PPGYVGY EGGQLTE VRR+PY
Sbjct: 552 TELARALAEAMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPY 611
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DEIEKAHP+VFN++LQ+LEDGRLTDSKGR VDF+NTL+IMTSNVG+ I++
Sbjct: 612 SVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNVGADQIKRNS-T 670
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF D +N++K V ELK+ FRPEFLNR+DE IVF L + + +I +M
Sbjct: 671 LGFTAVQD-SGREFNQMKDKVLAELKKAFRPEFLNRIDETIVFHSLEQEHINQIVTLMSD 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ RL+ ++++ ++T+ + + +EG++P YGARPLRRAI + +ED ++E +L +IK+
Sbjct: 730 ELRKRLREQEVDFELTDAAKAFLAKEGFDPQYGARPLRRAIQKHIEDRLSEDLLLGKIKK 789
Query: 815 GDSVIVDVDSDGNVTVLNGSSGAPE 839
GD + +D + +G + V+ S PE
Sbjct: 790 GDKLTID-ERNGELVVIPAGSITPE 813
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LAQEEA RLGHN IG+EH+LLGL+REGEG+AA+ L LG I+
Sbjct: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALTALGLGLEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G E
Sbjct: 62 DEVESLIGRGQE 73
>gi|228475267|ref|ZP_04059992.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
hominis SK119]
gi|228270732|gb|EEK12141.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
hominis SK119]
Length = 823
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/734 (57%), Positives = 562/734 (76%), Gaps = 13/734 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + + + N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG--SPEMNTKNATANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+M+EI + +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMDEIHHAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EPSV++T+ ILKGLR+RYE HH++ +DEAL SAA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALESAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q S+ +T G +++ DI +++ WTGIP+ +
Sbjct: 437 ENAANLRDKQSKLEKQYE------DAKSEWKTSQGGQSTSLSKEDIAEVIAGWTGIPLTR 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +EETLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGASEGQD--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSDGN 827
EG V +D DGN
Sbjct: 788 EGKEVT--IDHDGN 799
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E G
Sbjct: 62 EEVEKLIGHGQEHSG 76
>gi|314937170|ref|ZP_07844517.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
gi|313655789|gb|EFS19534.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
Length = 823
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/734 (57%), Positives = 563/734 (76%), Gaps = 13/734 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + + A + N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG--SPEMNAKNATANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+M+EI + +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMDEIHHAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EPSV++T+ ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K T G +++ DI +++ WTGIP+ +
Sbjct: 437 ENAANLRDKQSKLEKQYEDAKNEWK------TSQGGQSTSLSKEDIAEVIAGWTGIPLTR 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +EETLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGASEGQD--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSDGN 827
EG V +D DGN
Sbjct: 788 EGKEVT--IDHDGN 799
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E G
Sbjct: 62 EEVEKLIGHGQEHSG 76
>gi|16802278|ref|NP_463763.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47097423|ref|ZP_00234971.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254828692|ref|ZP_05233379.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|254913462|ref|ZP_05263474.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|254937957|ref|ZP_05269654.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284800527|ref|YP_003412392.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284993713|ref|YP_003415481.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|386042568|ref|YP_005961373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|386045869|ref|YP_005964201.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|386049161|ref|YP_005967152.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|386052509|ref|YP_005970067.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404282664|ref|YP_006683561.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404409465|ref|YP_006695053.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404412333|ref|YP_006697920.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|405757220|ref|YP_006686496.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16409597|emb|CAD00759.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47014200|gb|EAL05185.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258601096|gb|EEW14421.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|258610567|gb|EEW23175.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284056089|gb|ADB67030.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284059180|gb|ADB70119.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|293591469|gb|EFF99803.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|345532860|gb|AEO02301.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|345535802|gb|AEO05242.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|346423007|gb|AEO24532.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|346645160|gb|AEO37785.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404229291|emb|CBY50695.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404232166|emb|CBY53569.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235102|emb|CBY56504.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|404238032|emb|CBY59433.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|441469781|emb|CCQ19536.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes]
gi|441472917|emb|CCQ22671.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes N53-1]
Length = 820
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/739 (58%), Positives = 572/739 (77%), Gaps = 17/739 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
EKA LRD+E LK K E +KA + + G VTE + +V++WTGIPV
Sbjct: 436 EKAASLRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPV 487
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTG
Sbjct: 488 AKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTG 547
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR+
Sbjct: 548 VGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQ 607
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQ 666
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I +
Sbjct: 667 DKSMGFNVTDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTL 724
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
+ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 725 LTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGN 784
Query: 812 IKEGDSVIVDVDSDGNVTV 830
IK GD V + V DG + V
Sbjct: 785 IKVGDYVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|217965681|ref|YP_002351359.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290892627|ref|ZP_06555620.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|386006961|ref|YP_005925239.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|386025542|ref|YP_005946318.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404406685|ref|YP_006689400.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217334951|gb|ACK40745.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290557936|gb|EFD91457.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|307569771|emb|CAR82950.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022123|gb|AEH91260.1| Clp endopeptidase ATP-binding subunit; putative ClpB [Listeria
monocytogenes M7]
gi|404240834|emb|CBY62234.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 820
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/739 (58%), Positives = 573/739 (77%), Gaps = 17/739 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L ++ KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSELKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
EKA LRD+E LK K E +KA + + G VTE + +V++WTGIPV
Sbjct: 436 EKAASLRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPV 487
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTG
Sbjct: 488 AKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTG 547
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR+
Sbjct: 548 VGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQ 607
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQ 666
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I +
Sbjct: 667 DKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTL 724
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
+ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 725 LTAQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGN 784
Query: 812 IKEGDSVIVDVDSDGNVTV 830
IK GD V + V DG + V
Sbjct: 785 IKVGDYVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/751 (57%), Positives = 576/751 (76%), Gaps = 14/751 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V +A EARRLG YI +EH+LL ++REGE VA R+L +LG DP + +++
Sbjct: 82 FTPRTKRVFEIAFMEARRLGSTYISTEHILLAIMREGESVAVRILMDLGVDPQKLFEEIM 141
Query: 155 RMVGESTEAVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ E + +G GV N PTL ++ +LT+LA EGK+DPV+GR+ +IERV+
Sbjct: 142 KLLNEDAKNMG-GVSPQQQINFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVI 200
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNPCLIGEPGVGKTAI EGLAQ+I G+VP+ + K+V+ LD+ +VAG+K+
Sbjct: 201 QILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPELLRNKRVVALDLSAMVAGSKF 260
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEERLKK MEE++++ +ILFIDE+HT+IGAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 261 RGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG 320
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP+ V EP+ +ET+QILKGLR++YE HH ++ TDEA+ +
Sbjct: 321 ATTLDEYRKHIEKDAALERRFQPILVGEPTPEETVQILKGLRDKYEAHHGVKITDEAIKA 380
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A LS +YI+DR+LPDKAIDLIDEA SRVRL+ LP +E E+++ ++ KEK EA+R
Sbjct: 381 AVDLSTKYITDRYLPDKAIDLIDEAASRVRLKMYTLPPHVKEHEEKIEKLEKEKEEAIRL 440
Query: 451 QDFEKAGELRDREMDLKAQISALVDKG-KEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q++EKA ++RD + L+ ++ + + + KA+ P+VTE DI +IV++WTGI
Sbjct: 441 QEYEKAAKIRDEIIKLRQELEKVKNSWTNDQQKAQ-------PIVTENDIAYIVASWTGI 493
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ DES+RLLK+EE LHKRV+GQDEAV+A++RAIRR RVGLK+P RPI SFIF GP
Sbjct: 494 PVNKLTEDESERLLKLEEVLHKRVVGQDEAVRAVARAIRRGRVGLKDPKRPIGSFIFLGP 553
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+EL +ALA FG+E+A+IR+DMSE+ME+ VSKLIGSPPGYVGY EGGQLTE V
Sbjct: 554 TGVGKTELCRALAEALFGTEDALIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKV 613
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RRRPY+VVLFDEIEKAHPDVFN++LQIL+DGRLTDS+GRTV F+NT++IMTSN+G+ +I
Sbjct: 614 RRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNIGAQLI- 672
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+++GF DEK +Y +IK V ELK+ FRPEFLNR+DE+IVF L + +VK+I
Sbjct: 673 TNPKKLGFSTSEDEKQRTYEQIKESVMGELKKTFRPEFLNRIDEIIVFHPLDEEDVKKIV 732
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+I+L + +R+K+ + + T E + ++G++P +GARPL+RAI ++ED ++E +L
Sbjct: 733 EILLNNLKERIKSSEYYAEFTPALVEAIAKKGFDPLFGARPLKRAIQTMVEDKISEAILE 792
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
+IK+GD IVD D V S + E+
Sbjct: 793 GQIKQGDKFIVDYVDDKTVITKKEKSSSSET 823
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 91 MFE-RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF+ RFTE+A K IMLAQ+ A LGHNY+G+EHLLLGL+REG G+AARVL++ G +
Sbjct: 1 MFQGRFTERAEKAIMLAQQSAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKV 60
Query: 150 RTQVIRMVG 158
++ ++G
Sbjct: 61 IDEIEELIG 69
>gi|297201430|ref|ZP_06918827.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197713837|gb|EDY57871.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 841
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/758 (57%), Positives = 580/758 (76%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+KALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D+K ++Y R+K+ V++ELKQ+FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 K-GFNLGFAASGDKK-TNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLTQEDILAIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RL+ +D+ +++++ +E + +GY+ GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMIAKVDERLRDRDMGIELSQSAKELLSTKGYDQVLGARPLRRTIQREIEDTLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGETKTFTFRGEEKAALPDVPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|297192907|ref|ZP_06910305.1| ATP-dependent Clp protease [Streptomyces pristinaespiralis ATCC
25486]
gi|197722625|gb|EDY66533.1| ATP-dependent Clp protease [Streptomyces pristinaespiralis ATCC
25486]
Length = 841
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/737 (59%), Positives = 571/737 (77%), Gaps = 16/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K S+Y+R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAAQGDVK-SNYDRMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ L+++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 DLMIAKVDERLKDRDMGLELSATAKSLLAKKGYDPVLGARPLRRTIQREIEDILSEKILF 788
Query: 810 REIKEGDSVIVDVDSDG 826
E++ G V+VD + +G
Sbjct: 789 GELRPGHIVVVDTEGEG 805
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|254393706|ref|ZP_05008829.1| ATP-dependent Clp protease [Streptomyces clavuligerus ATCC 27064]
gi|294813216|ref|ZP_06771859.1| Clp-family ATP-binding protease [Streptomyces clavuligerus ATCC
27064]
gi|326441673|ref|ZP_08216407.1| putative ATP-dependent Clp protease [Streptomyces clavuligerus ATCC
27064]
gi|197707316|gb|EDY53128.1| ATP-dependent Clp protease [Streptomyces clavuligerus ATCC 27064]
gi|294325815|gb|EFG07458.1| Clp-family ATP-binding protease [Streptomyces clavuligerus ATCC
27064]
Length = 841
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/738 (59%), Positives = 572/738 (77%), Gaps = 17/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ L+++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMIAKVDERLKDRDMGLELSATAKSLLAKKGYDPVLGARPLRRTIQREIEDILSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDG 826
E++ G V+VD D +G
Sbjct: 789 FGELRPGHIVVVDTDGEG 806
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|239636922|ref|ZP_04677920.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
gi|239597470|gb|EEQ79969.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
Length = 817
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/733 (57%), Positives = 562/733 (76%), Gaps = 11/733 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDGLARDLTIIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++T+ ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTVSILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS++Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+++ ++ EK+ AV Q+F
Sbjct: 377 LSHRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQQIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K V ++E DI +++ WTGIP+ +
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNSQDG------VSTSLSEEDIAEVIAGWTGIPLTR 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLH RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHHRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGY+G+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYIGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGADDGQD--YESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I ++VTE+ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTLRLSEQNINIKVTEKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQL 787
Query: 814 EGDSVIVDVDSDG 826
EG V VD D +
Sbjct: 788 EGKEVTVDHDGEA 800
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVG 158
+V +++G
Sbjct: 62 EEVEKLIG 69
>gi|418614178|ref|ZP_13177162.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
gi|374821459|gb|EHR85520.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
Length = 817
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/730 (57%), Positives = 562/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGL +RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLCDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E A+ G + ++E +I +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL ++I + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKI 787
Query: 814 EGDSVIVDVD 823
EG V +D D
Sbjct: 788 EGKEVTIDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|254853501|ref|ZP_05242849.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
gi|258606873|gb|EEW19481.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
Length = 821
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/740 (58%), Positives = 572/740 (77%), Gaps = 19/740 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIP 510
EKA LRD+E LK K E +KA E + D V E+ + +V++WTGIP
Sbjct: 436 EKAASLRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIP 486
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPT
Sbjct: 487 VAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPT 546
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR
Sbjct: 547 GVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVR 606
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
++PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 607 QKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-K 665
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I
Sbjct: 666 QDKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVT 723
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
++ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 724 LLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRG 783
Query: 811 EIKEGDSVIVDVDSDGNVTV 830
IK GD V + V DG + V
Sbjct: 784 NIKVGDYVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|46906465|ref|YP_012854.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093952|ref|ZP_00231688.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|226222861|ref|YP_002756968.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825724|ref|ZP_05230725.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|254932450|ref|ZP_05265809.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|300764643|ref|ZP_07074635.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|386730997|ref|YP_006204493.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404279782|ref|YP_006680680.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404285599|ref|YP_006692185.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405748575|ref|YP_006672041.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|405751449|ref|YP_006674914.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405754317|ref|YP_006677781.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406703005|ref|YP_006753359.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|417314282|ref|ZP_12100983.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|424713097|ref|YP_007013812.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
gi|424821963|ref|ZP_18246976.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|46879729|gb|AAT03031.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47017673|gb|EAL08470.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|225875323|emb|CAS04020.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293584007|gb|EFF96039.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|293594968|gb|EFG02729.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|300514750|gb|EFK41805.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|328467843|gb|EGF38883.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|332310643|gb|EGJ23738.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|384389755|gb|AFH78825.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404217775|emb|CBY69139.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|404220649|emb|CBY72012.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404223517|emb|CBY74879.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404226417|emb|CBY47822.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404244528|emb|CBY02753.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360035|emb|CBY66308.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|424012281|emb|CCO62821.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
Length = 820
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/740 (58%), Positives = 572/740 (77%), Gaps = 19/740 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIP 510
EKA LRD+E LK K E +KA E + D V E+ + +V++WTGIP
Sbjct: 436 EKAASLRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIP 486
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPT
Sbjct: 487 VAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPT 546
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR
Sbjct: 547 GVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVR 606
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
++PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 607 QKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-K 665
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I
Sbjct: 666 QDKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVT 723
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
++ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 724 LLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRG 783
Query: 811 EIKEGDSVIVDVDSDGNVTV 830
IK GD V + V DG + V
Sbjct: 784 NIKVGDYVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|386384235|ref|ZP_10069633.1| ATPase AAA-2 domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
gi|385668306|gb|EIF91651.1| ATPase AAA-2 domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
Length = 841
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/737 (58%), Positives = 572/737 (77%), Gaps = 16/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYSGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K + Y+R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I
Sbjct: 671 K-GFNLGFAAQGDVK-TGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSEDDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ L+++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 DLMIAKVDERLKDRDMGLELSSTAKSLLAKKGYDPVLGARPLRRTIQREIEDILSEKILF 788
Query: 810 REIKEGDSVIVDVDSDG 826
E++ G V+VD + +G
Sbjct: 789 GELRPGHIVVVDTEGEG 805
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|422408257|ref|ZP_16485218.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
gi|313611199|gb|EFR86009.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 820
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/740 (58%), Positives = 572/740 (77%), Gaps = 19/740 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIP 510
EKA LRD+E LK K E +KA E + D V E+ + +V++WTGIP
Sbjct: 436 EKAASLRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIP 486
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPT
Sbjct: 487 VAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPT 546
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR
Sbjct: 547 GVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVR 606
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
++PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 607 QKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-K 665
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I
Sbjct: 666 QDKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVT 723
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
++ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 724 LLTAQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRG 783
Query: 811 EIKEGDSVIVDVDSDGNVTV 830
IK GD V + V DG + V
Sbjct: 784 NIKVGDYVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|422808348|ref|ZP_16856759.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
gi|378753382|gb|EHY63966.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 820
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/740 (58%), Positives = 572/740 (77%), Gaps = 19/740 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIP 510
EKA LRD+E LK K E +KA E + D V E+ + +V++WTGIP
Sbjct: 436 EKAASLRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIP 486
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPT
Sbjct: 487 VAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPT 546
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR
Sbjct: 547 GVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVR 606
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
++PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 607 QKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-K 665
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I
Sbjct: 666 QDKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVT 723
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
++ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 724 LLTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRG 783
Query: 811 EIKEGDSVIVDVDSDGNVTV 830
IK GD V + V DG + V
Sbjct: 784 NIKVGDYVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|255520324|ref|ZP_05387561.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-175]
Length = 819
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/740 (58%), Positives = 572/740 (77%), Gaps = 19/740 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA---ETEAGDVGPVVTEVDIQHIVSAWTGIP 510
EKA LRD+E LK K E +KA E + D V E+ + +V++WTGIP
Sbjct: 436 EKAASLRDKEQKLK--------KSLEETKANWQEKQGLDHSEVTEEI-VAEVVASWTGIP 486
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPT
Sbjct: 487 VAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPT 546
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR
Sbjct: 547 GVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVR 606
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
++PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 607 QKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-K 665
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I
Sbjct: 666 QDKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVT 723
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
++ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 724 LLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRG 783
Query: 811 EIKEGDSVIVDVDSDGNVTV 830
IK GD V + V DG + V
Sbjct: 784 NIKVGDYVEIGV-KDGKLEV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|418871544|ref|ZP_13425920.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|418949170|ref|ZP_13501429.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
gi|375368097|gb|EHS72024.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|375369614|gb|EHS73487.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
Length = 818
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|347547703|ref|YP_004854031.1| putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346980774|emb|CBW84681.1| Putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 820
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/737 (57%), Positives = 568/737 (77%), Gaps = 13/737 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TD AL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDAALDAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDEAGS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDEAGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E LK + KE + VTE + +V++WTGIPV K
Sbjct: 436 EKAAALRDKEHKLKKSLEETKANWKEKQGLDHSE------VTEDIVAEVVASWTGIPVAK 489
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 490 LAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVG 549
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++P
Sbjct: 550 KTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKP 609
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 610 YSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDK 668
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++
Sbjct: 669 SMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLT 726
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK
Sbjct: 727 AQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIK 786
Query: 814 EGDSVIVDVDSDGNVTV 830
GD++ + V DG + V
Sbjct: 787 VGDTIEIGV-KDGKLKV 802
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISAEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|418619636|ref|ZP_13182459.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis VCU122]
gi|374824202|gb|EHR88173.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis VCU122]
Length = 823
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/734 (57%), Positives = 562/734 (76%), Gaps = 13/734 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + + + N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG--SPEMNTKNATANKSNNTPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+M+EI + +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMDEIHHAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EPSV++T+ ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPSVEDTVAILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K T G +++ DI +++ WTGIP+ +
Sbjct: 437 ENAANLRDKQSKLEKQYEDAKNEWK------TSQGGQSTSLSKEDIAEVIAGWTGIPLTR 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +EETLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGASEGQD--YETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI + VT++ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVDSDGN 827
EG V +D DGN
Sbjct: 788 EGKEVT--IDHDGN 799
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V ++G E G
Sbjct: 62 EEVENLIGHGQEHSG 76
>gi|298242789|ref|ZP_06966596.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
gi|297555843|gb|EFH89707.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
Length = 843
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/740 (58%), Positives = 565/740 (76%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI LA +EARRL H+YIG+EHLLLGL+REGEG+AA VLE+LG + +RTQ I
Sbjct: 85 LTPRAKKVIELAVDEARRLNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRTQTI 144
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ +S + +K PT+++ G +LT A G LDPV+GR +IERV+QIL
Sbjct: 145 QVLSQSNPPHERD----AKHSKTPTIDQMGIDLTAAARAGTLDPVIGRHQEIERVIQILS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RR KNNP LIGEPGVGKTAI EGLAQR+ SG+VP+T+ K+++TLD+G LVAGTKYRGEF
Sbjct: 201 RRNKNNPALIGEPGVGKTAIVEGLAQRLVSGEVPETLANKRLLTLDVGSLVAGTKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK++EEI+ S + I+FIDEVHTL+GAGAAEGA+DAANILKP+L+RGELQCIGATTL
Sbjct: 261 EERLKKIIEEIRNSRDCIIFIDEVHTLVGAGAAEGAVDAANILKPALSRGELQCIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IE+D AL+RRFQ V + EPSV+ETI+ILKG+RERYE HH+L TDEAL +A ++
Sbjct: 321 DEYRKYIERDAALQRRFQEVIIREPSVEETIEILKGIRERYEQHHRLIITDEALRAATEM 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ +YI+DRF+PDKAIDLIDEA SRVR++++ P +E K L + +EK A++ Q++E
Sbjct: 381 ASRYITDRFMPDKAIDLIDEAASRVRMQNSLAPLNLKEAMKGLESVLREKEAAIQQQEYE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A ELRDRE+ L+ +I+ L S + E G P V E +I IVS WTGIPV ++
Sbjct: 441 LAAELRDREVKLRERIAKL------ESGWQKERGSDKPTVGEEEIAQIVSMWTGIPVMRI 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES RLL+MEE LH RVIGQ+EA++ ISRA+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 495 AQEESQRLLQMEEALHSRVIGQNEAIEKISRAVRRARAGLKDPKRPIGSFIFMGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ LA + FGSEEA+I++DMSEFMERH ++L+G+PPGYVGY EGGQLTEAVRR+ Y
Sbjct: 555 TELARTLAEFMFGSEEALIKIDMSEFMERHAAARLVGAPPGYVGYEEGGQLTEAVRRKSY 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHPDVFNM+LQILEDG+LTD+KGRTVDF+NT++IMTSNVG+S++ K
Sbjct: 615 SVILLDEIEKAHPDVFNMLLQILEDGKLTDAKGRTVDFRNTVIIMTSNVGASLLNKEA-S 673
Query: 695 IGFDLDYDEKDSS---YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF D+ ++ Y +K V EL+ F+PEFLNR+DE+IVF L E+ I D+
Sbjct: 674 MGFRQSKDKAKANQAEYESMKGKVLGELRNTFKPEFLNRIDEVIVFHSLRMEEMYSIVDL 733
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
+L V +L + +EL V + ++ ++E+G++P YGARPLRR I R++ED +AE +L +
Sbjct: 734 LLNRVRTQLTEQQVELVVPQPAKDFLIEKGFDPQYGARPLRRTIQRMVEDPLAEGLLQGK 793
Query: 812 IKEGDSV---IVDVDSDGNV 828
GD + IV+ D D V
Sbjct: 794 FHPGDLIEASIVEGDLDLQV 813
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 59/78 (75%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++FTE+A KV+ LAQEEA+R HNYIG+EHLLLGL+REGEGVAA+VL NLG + + +R+
Sbjct: 7 FDKFTERARKVLSLAQEEAQRFQHNYIGTEHLLLGLVREGEGVAAKVLANLGVELNKVRS 66
Query: 152 QVIRMVGESTEAVGAGVG 169
V ++G V +G
Sbjct: 67 AVEFIIGRGDRIVLGEIG 84
>gi|116668736|ref|YP_829669.1| ATPase [Arthrobacter sp. FB24]
gi|116608845|gb|ABK01569.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 830
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/738 (59%), Positives = 567/738 (76%), Gaps = 13/738 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGS---SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ + E GAGVG G + L+++G NLT+ A E KLDPV+GR+ ++ERV
Sbjct: 140 QLLSGYQGKETTGAGVGAGQPEGTPAGSVVLDQFGRNLTQAARENKLDPVIGREQEMERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++
Sbjct: 200 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 260 YRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL
Sbjct: 320 GATTLDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALA 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA LS +YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + ++ EK A+
Sbjct: 380 SAANLSERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIAELKMEKESAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
QDFE A LRD+E L A+ + ++ +T D V E I +++ TGI
Sbjct: 440 AQDFEGAASLRDKEQKLIAE------RAEKERHWKTGGMDDISEVDEDLIAEVLANSTGI 493
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLLKME+ LHKRV+GQ+EA+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 494 PVFKLTEEESSRLLKMEDELHKRVVGQNEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 553
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE V
Sbjct: 554 TGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKV 613
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 614 RRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 673
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI
Sbjct: 674 K-SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIV 731
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ + + RLK KD+ +++T+ + + GY+P+ GARPLRR I R +ED ++EK+L
Sbjct: 732 DLFVSRLEKRLKDKDMGIELTKAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILF 791
Query: 810 REIKEGDSVIVDVDSDGN 827
EI GD V+VDVD +G+
Sbjct: 792 GEIHAGDIVVVDVDGEGD 809
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEIIGQGQQA 73
>gi|326778547|ref|ZP_08237812.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
gi|326658880|gb|EGE43726.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
Length = 863
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/759 (57%), Positives = 578/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 101 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 160
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 161 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 220
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 221 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 280
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 281 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 340
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 341 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 400
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 401 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 460
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 461 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATG 511
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 512 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 571
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 572 PSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 631
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 632 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 691
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K ++Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 692 SK-GFNLGFAAQGDVK-TNYERMKTKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQI 749
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 750 VDLMLAKVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQRQIEDVLSEKIL 809
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+V + +G+ +L D P+
Sbjct: 810 FGELRPGHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 848
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 22 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 81
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 82 QQVEEIIGQGQQA 94
>gi|397903987|ref|ZP_10504920.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
gi|343178731|emb|CCC57819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
Length = 818
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/733 (59%), Positives = 577/733 (78%), Gaps = 12/733 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + ++I LA+ EAR L HN++ EH++L LLREGEGVA +L LG D R +++
Sbjct: 80 LTPRTKRIIELARNEARNLNHNFVAPEHMMLALLREGEGVAIAILAKLGIDIVKARNEIL 139
Query: 155 RM--VGESTEAVGAGVGGGSSGNKM--PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
VGE + G G+ + PTL++YG +LT+LA EGKLDPV+GR+ + ERV+
Sbjct: 140 NSLNVGELGQGFKGKPGPGTRHRQTNTPTLDQYGRDLTELAREGKLDPVIGRENETERVI 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
+IL RRTKNNPCLIGEPGVGKTAIAEGLAQRI G+VP+ ++ K+V+TLD+ +VAG+KY
Sbjct: 200 EILSRRTKNNPCLIGEPGVGKTAIAEGLAQRIVEGNVPEILKNKRVVTLDLSGMVAGSKY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEER+K++M+EI+++ IILFIDE+HTL+GAGAAEGAIDA+NILKP+LARGE+Q IG
Sbjct: 260 RGEFEERIKRVMDEIRRAGNIILFIDEIHTLVGAGAAEGAIDASNILKPALARGEIQVIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATT+DEYRK+IEKD ALERRFQPV+V EPS +E+I ILKGLR++YE HHK++ TDEAL +
Sbjct: 320 ATTIDEYRKYIEKDSALERRFQPVQVGEPSTEESILILKGLRDKYEAHHKVKITDEALEA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A LS++YI+DRFLPDKAIDL+DEA ++VRL++ P + + LE+EL ++ KEK EA+
Sbjct: 380 AVNLSHRYITDRFLPDKAIDLMDEAAAKVRLKNLTAPPDVKNLEEELEKVRKEKEEAINT 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q+FEKA +LRDRE ++K ++ + + +E PVVT DI ++VS WTGIP
Sbjct: 440 QEFEKAAKLRDRENEIKNELERIKKDWQNQKDSEV------PVVTVEDIANVVSRWTGIP 493
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ ES++LLK+EE LH+RV+GQDEAVKA++RA+RRARVG+K+P RPI SFIF GPT
Sbjct: 494 VNKLTETESEKLLKLEEILHQRVVGQDEAVKAVARAVRRARVGIKDPKRPIGSFIFLGPT 553
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL+KALA FG E AMIR+DMSE+ME+HTVS+LIGSPPGYVGY EGGQLTE VR
Sbjct: 554 GVGKTELSKALAEAMFGDENAMIRIDMSEYMEKHTVSRLIGSPPGYVGYEEGGQLTEKVR 613
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+PY+VVLFDEIEKAHPDVFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+ I+K
Sbjct: 614 RKPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGKTVDFRNTIVIMTSNVGAQTIKK 673
Query: 691 GGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+ +GF + EK+ SY ++K V E+LK+ FRPEFLNR+DE+IVF L ++++IA
Sbjct: 674 -QQTLGFAATTEKEKEDSYEKMKQNVMEDLKKTFRPEFLNRIDEIIVFHPLEDKDIEKIA 732
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
++MLK V +RLK ++E+ E + + ++G++P+YGARPLRRAI + +ED ++E+ML
Sbjct: 733 ELMLKSVINRLKDLEVEISYDEDVIKHLSKQGFDPTYGARPLRRAITKAVEDKLSEEMLK 792
Query: 810 REIKEGDSVIVDV 822
IK GD V++ V
Sbjct: 793 GNIKRGDKVVMKV 805
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF FTE++ +V+ LA EEA+RL HNYIG+EHLLLG++REG G A++VL++LG D IR
Sbjct: 1 MFNGFTERSQRVLQLAAEEAKRLNHNYIGTEHLLLGIIREG-GQASKVLKDLGIDDEKIR 59
Query: 151 TQVIRMVGESTE 162
+I + G+ E
Sbjct: 60 NLIIEIEGKGEE 71
>gi|283769680|ref|ZP_06342572.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
gi|283459827|gb|EFC06917.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
Length = 818
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/730 (57%), Positives = 564/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K T+ G + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I++ VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNIKIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|257424638|ref|ZP_05601065.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427306|ref|ZP_05603705.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429942|ref|ZP_05606326.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257435548|ref|ZP_05611596.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282913357|ref|ZP_06321146.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|282923274|ref|ZP_06330954.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|293500403|ref|ZP_06666254.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|293509348|ref|ZP_06668059.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
gi|293523935|ref|ZP_06670622.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|257272208|gb|EEV04331.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275499|gb|EEV06972.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279139|gb|EEV09740.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257284739|gb|EEV14858.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282314142|gb|EFB44532.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|282322389|gb|EFB52711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|290920898|gb|EFD97959.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|291095408|gb|EFE25669.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|291467445|gb|EFF09960.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
Length = 818
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLG+++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGVMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|295837256|ref|ZP_06824189.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
gi|197699938|gb|EDY46871.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
Length = 841
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/759 (57%), Positives = 579/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G T A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQTGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTL+EYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLEEYRKYLEKDAALERRFQPIQVAEPSLAHTIEILKGLRDRYEAHHRVSITDSALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDEELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQEDAVKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+ELAK LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELAKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF + D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ I
Sbjct: 671 SK-GFNLGFAVQGDTK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFPQLTEKDITRI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ +++++ R+ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMITKVDERLKDRDMGIELSQPARKLLGKRGYDPVLGARPLRRTIQREIEDVLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D PV
Sbjct: 789 FGELRPGHIVVVDTEGEGENETFTFRGEEKSTLPDAPPV 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|358052016|ref|ZP_09146007.1| endopeptidase [Staphylococcus simiae CCM 7213]
gi|357258496|gb|EHJ08562.1| endopeptidase [Staphylococcus simiae CCM 7213]
Length = 816
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/730 (57%), Positives = 566/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMNNKNAQTSKANNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EP+V++T++ILKGLR+RYE HH++ +DEAL +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPTVEDTVEILKGLRDRYEAHHRINISDEALEAAVR 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPTNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K T+ G + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLGLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + +D Y I+ + +ELK FRPEFLNR+D++IVF +L+K E+KEI +M+
Sbjct: 670 FAGFGGASEGQD--YETIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ DRL ++I ++VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 KKLTDRLSEQNINIKVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNKI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKEVTVDHD 797
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFDITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|116871616|ref|YP_848397.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740494|emb|CAK19614.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 820
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/731 (58%), Positives = 569/731 (77%), Gaps = 16/731 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKA--ETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
EKA LRD+E LK K E +KA + + G VTE + +V++WTGIPV
Sbjct: 436 EKAAALRDKEHKLK--------KSLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPV 487
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTG
Sbjct: 488 AKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTG 547
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR+
Sbjct: 548 VGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQ 607
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K
Sbjct: 608 KPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQ 666
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I +
Sbjct: 667 DKSMGFNVIDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTL 724
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
+ ++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L
Sbjct: 725 LTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGN 784
Query: 812 IKEGDSVIVDV 822
IK GD+V + V
Sbjct: 785 IKVGDNVEIGV 795
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|82750232|ref|YP_415973.1| endopeptidase [Staphylococcus aureus RF122]
gi|282915846|ref|ZP_06323611.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
gi|122063322|sp|Q2YSD6.1|CLPC_STAAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|82655763|emb|CAI80163.1| endopeptidase [Staphylococcus aureus RF122]
gi|282320142|gb|EFB50487.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
Length = 818
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/730 (57%), Positives = 563/730 (77%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K T+ G + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWK-----NTQNG-MSTSLSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|309810835|ref|ZP_07704636.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
gi|308435141|gb|EFP58972.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
Length = 874
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/760 (57%), Positives = 582/760 (76%), Gaps = 23/760 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E +LGH+YIG+EH+LLGL+REGEGVAA+VL LGAD S +RT VI
Sbjct: 80 FTPRAKKVLELSLREGLQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGADLSTVRTTVI 139
Query: 155 RMVGE---STEAVGAGVGGGSSGNKM-------PTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+++ E AGVG SSG L+++G NLT+ A EGKLDPV+GR+
Sbjct: 140 QLLSGYQGKGEPQAAGVGASSSGGPAEGTPAGSTVLDQFGRNLTQAAREGKLDPVIGREK 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +GDVP+T++ K + TLD+G L
Sbjct: 200 EIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAADIVAGDVPETLKDKHLYTLDLGSL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EI+ +IILFIDE+H+L+GAGAAEGAIDAA+ILKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHSLVGAGAAEGAIDAASILKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EP++ + I+ILKGLR+RYE HH++ T
Sbjct: 320 ELQTIGATTLDEYRKHIEKDAALERRFQPIQVNEPTIPQAIEILKGLRDRYEAHHRVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D ALV A ++ +YI+DRFLPDKAIDLIDEAG+R+R+R P E RE ++++ + +EK
Sbjct: 380 DAALVGAVNMADRYITDRFLPDKAIDLIDEAGARLRIRRMTAPPELREFDEKIVHVRREK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV--GPVVTEVDIQHI 502
A+ QDFEKA LRD E L + KE + E +AGDV V+ E + +
Sbjct: 440 ESAIDSQDFEKAAALRDDERKLVEE--------KEAKEKEWKAGDVDLAAVLDEELVAEV 491
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
++A TGIPV K++ +ES RLL+ME+ LHKRVIG D+A+KA+S+AIRR R GLK+P RP
Sbjct: 492 LAASTGIPVFKLTEEESSRLLRMEDELHKRVIGNDDAIKALSQAIRRTRAGLKDPRRPGG 551
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK+LA + FG E+A+I LDMSE+ E+HTVS+L GSPPGYVGY EG
Sbjct: 552 SFIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEYAEKHTVSRLFGSPPGYVGYEEG 611
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
GQLTE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N
Sbjct: 612 GQLTEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTN 671
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K G +GF D++ S+Y+R+K+ V EELKQ+FRPEFLNR+D+ IVF QL++
Sbjct: 672 LGTRDIAK-GVSLGFAAGNDQR-SNYDRMKAKVGEELKQHFRPEFLNRVDDTIVFPQLSQ 729
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
E+ EI D+M+ ++ +RLK +D+ +++T+ ++ + + GY+P+ GARPLRR I R +ED
Sbjct: 730 AEIVEIVDLMVAKLDERLKDQDMAIELTQGAKDLLAKRGYDPALGARPLRRTIQREIEDQ 789
Query: 803 MAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
++EK+L EI +GD V+VDV+ +G SG P SL+
Sbjct: 790 LSEKILFGEISKGDLVLVDVEGEGKEATFT-FSGTPISLS 828
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTE 162
QV ++G+ +
Sbjct: 61 EQVQEIIGQGQQ 72
>gi|418950315|ref|ZP_13502500.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
gi|375377281|gb|EHS80761.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
Length = 818
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEKDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|182437911|ref|YP_001825630.1| ATP-dependent Clp protease [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466427|dbj|BAG20947.1| putative ATP-dependent Clp protease [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 842
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/759 (57%), Positives = 578/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K ++Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TNYERMKTKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMLAKVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQRQIEDVLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+V + +G+ +L D P+
Sbjct: 789 FGELRPGHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|418578415|ref|ZP_13142510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|418902788|ref|ZP_13456829.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
gi|377696442|gb|EHT20797.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|377741803|gb|EHT65788.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
Length = 818
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPTLARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|163841921|ref|YP_001626326.1| hemolysin [Renibacterium salmoninarum ATCC 33209]
gi|162955397|gb|ABY24912.1| negative regulator of genetic competence [Renibacterium
salmoninarum ATCC 33209]
Length = 830
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/761 (58%), Positives = 573/761 (75%), Gaps = 19/761 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP---TLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ + E AGVG G L+++G NLT+ A + KLDPV+GR+ ++ERV
Sbjct: 140 QLLSGYQGKETASAGVGQGQQEGTPAGSVVLDQFGRNLTQDARDNKLDPVIGREHEMERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNP LIGEPGVGKTA+ EGLAQ IA GDVPDTI+ K++ TLD+G LVAG++
Sbjct: 200 MQILSRRTKNNPVLIGEPGVGKTAVVEGLAQAIARGDVPDTIKDKQLYTLDLGSLVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 260 YRGDFEERLKKVLKEIQTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL
Sbjct: 320 GATTLDEYRKHIEKDAALERRFQPIQVKEPSVSHAIEILKGLRDRYEAHHRVSITDGALT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P E +E++ E+ + +K A+
Sbjct: 380 SAATLAERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKEMDGEIASVKAQKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFE A LRD E L I+ DK + ++ VTEVD I +++
Sbjct: 440 AQDFEGAAALRDTEQKL---ITERADKDRAWRTGGIDS------VTEVDEELIAEVLANS 490
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +ES RLLKME+ LHKRV+GQDEA+K++S+AIRR R GLK+P RP SFIF
Sbjct: 491 TGIPVFKLTEEESGRLLKMEDELHKRVVGQDEAIKSLSQAIRRTRAGLKDPKRPGGSFIF 550
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLT
Sbjct: 551 AGPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLT 610
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 EKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTR 670
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 DISK-SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIV 728
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
EI D+ + + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK
Sbjct: 729 EIVDMFVARLELRLKEKDMGIELTAAAKALLATRGYDPAMGARPLRRTIQREIEDQLSEK 788
Query: 807 MLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
+L E+K G+ V+VDV+ DG+ + A + + PV
Sbjct: 789 ILFGELKAGEIVVVDVEGDGDEAKFTFAGTAKPRVPEIAPV 829
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEG+AA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGIAAKALESLSISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEIIGQGQQA 73
>gi|269793848|ref|YP_003313303.1| chaperone ATPase [Sanguibacter keddieii DSM 10542]
gi|269096033|gb|ACZ20469.1| ATPase with chaperone activity, ATP-binding subunit [Sanguibacter
keddieii DSM 10542]
Length = 858
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/739 (59%), Positives = 576/739 (77%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLTKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A GA G +G+ + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPVASGAPAEGTPAGSAV--LDQFGRNLTQAAREGKLDPVIGRAKEIERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I SGDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVSGDVPETLKDKQLYTLDLGSLVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQPV+V EPS+ I+ILKGLR+RYE HH++ TD ALV+
Sbjct: 318 ATTLDEYRKHIEKDAALERRFQPVQVAEPSLPHAIEILKGLRDRYEAHHRVSITDSALVA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +Y++DRFLPDKAIDL+DEAG+R+R+R P E REL++++ + + K A+
Sbjct: 378 AATLADRYVNDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEQIAEARRNKESAIDE 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD E L Q + DK K ++GD+ V EVD I +++ T
Sbjct: 438 QDFEKAAGLRDTEKQLTQQRA---DKEKAW-----KSGDL-DTVAEVDEELIAEVLAMST 488
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLLKME+ LHKRV+GQD A+K +S+AIRR R GLK+P RP SFIF+
Sbjct: 489 GIPVFKLTEEESSRLLKMEDELHKRVVGQDIAIKGLSQAIRRTRAGLKDPKRPGGSFIFA 548
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 549 GPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTE 608
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 609 KVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNLGTRD 668
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G + GF+ D +SY R+K+ V EELKQ+FRPEFLNR+D+ IVF QLT+ E+ +
Sbjct: 669 IAK-GVQTGFNAGGDTV-TSYERMKAKVNEELKQHFRPEFLNRVDDTIVFPQLTQDEIVK 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ RL+ KD+ +++T + + E+GY+P GARPLRRAI R +ED ++EK+
Sbjct: 727 IVDLMIAKLDGRLRDKDMGIELTPAAKILLSEKGYDPVLGARPLRRAIQREIEDVLSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDG 826
L +IK G+ ++VD + +G
Sbjct: 787 LFGDIKAGEMILVDAEGEG 805
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++GE +A
Sbjct: 61 SQVTEIIGEGQQA 73
>gi|15923515|ref|NP_371049.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926202|ref|NP_373735.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|49482754|ref|YP_039978.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49485389|ref|YP_042610.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|87161024|ref|YP_493213.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194286|ref|YP_499078.1| endopeptidase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148266984|ref|YP_001245927.1| ATPase [Staphylococcus aureus subsp. aureus JH9]
gi|150393031|ref|YP_001315706.1| ATPase [Staphylococcus aureus subsp. aureus JH1]
gi|151220699|ref|YP_001331521.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156978853|ref|YP_001441112.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|161508764|ref|YP_001574423.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141039|ref|ZP_03565532.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253731128|ref|ZP_04865293.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732532|ref|ZP_04866697.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005318|ref|ZP_05143919.2| endopeptidase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795377|ref|ZP_05644356.1| endopeptidase [Staphylococcus aureus A9781]
gi|258408936|ref|ZP_05681217.1| endopeptidase [Staphylococcus aureus A9763]
gi|258420427|ref|ZP_05683370.1| endopeptidase [Staphylococcus aureus A9719]
gi|258439347|ref|ZP_05690279.1| endopeptidase [Staphylococcus aureus A9299]
gi|258444087|ref|ZP_05692424.1| endopeptidase [Staphylococcus aureus A8115]
gi|258446355|ref|ZP_05694513.1| endopeptidase [Staphylococcus aureus A6300]
gi|258448448|ref|ZP_05696563.1| endopeptidase [Staphylococcus aureus A6224]
gi|258452743|ref|ZP_05700741.1| endopeptidase [Staphylococcus aureus A5948]
gi|258453804|ref|ZP_05701778.1| endopeptidase [Staphylococcus aureus A5937]
gi|269202147|ref|YP_003281416.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|282894957|ref|ZP_06303180.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|282903112|ref|ZP_06311003.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282904902|ref|ZP_06312760.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907852|ref|ZP_06315687.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910165|ref|ZP_06317969.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282918312|ref|ZP_06326049.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282928860|ref|ZP_06336451.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|283957322|ref|ZP_06374775.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|284023534|ref|ZP_06377932.1| ClpA-related protein [Staphylococcus aureus subsp. aureus 132]
gi|294850300|ref|ZP_06791034.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|295406901|ref|ZP_06816704.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295427062|ref|ZP_06819698.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|297208762|ref|ZP_06925190.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297246275|ref|ZP_06930124.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297590586|ref|ZP_06949225.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|304381877|ref|ZP_07364524.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379013806|ref|YP_005290042.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|379020295|ref|YP_005296957.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|384549389|ref|YP_005738641.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384861187|ref|YP_005743907.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384863853|ref|YP_005749212.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|384868552|ref|YP_005748748.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869110|ref|YP_005751824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|385780790|ref|YP_005756961.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|386728282|ref|YP_006194665.1| hemolysin [Staphylococcus aureus subsp. aureus 71193]
gi|386830168|ref|YP_006236822.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387142214|ref|YP_005730607.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|387149685|ref|YP_005741249.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|387601879|ref|YP_005733400.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|387779664|ref|YP_005754462.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|404477910|ref|YP_006709340.1| stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|415684080|ref|ZP_11449235.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|415688911|ref|ZP_11452426.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693998|ref|ZP_11455603.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417648357|ref|ZP_12298183.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|417650784|ref|ZP_12300549.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|417654130|ref|ZP_12303857.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|417796780|ref|ZP_12443984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|417798480|ref|ZP_12445646.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|417801347|ref|ZP_12448440.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|417889316|ref|ZP_12533407.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|417893562|ref|ZP_12537588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|417895979|ref|ZP_12539955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|417899762|ref|ZP_12543663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|417902183|ref|ZP_12546052.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|418279368|ref|ZP_12892731.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|418310656|ref|ZP_12922192.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|418312992|ref|ZP_12924490.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|418315148|ref|ZP_12926612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|418318082|ref|ZP_12929496.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|418320331|ref|ZP_12931692.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|418423697|ref|ZP_12996844.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426641|ref|ZP_12999667.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429567|ref|ZP_13002498.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432462|ref|ZP_13005262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436176|ref|ZP_13007993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439075|ref|ZP_13010796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442055|ref|ZP_13013672.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445183|ref|ZP_13016674.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448123|ref|ZP_13019528.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|418450947|ref|ZP_13022289.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|418453964|ref|ZP_13025237.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418456868|ref|ZP_13028083.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561558|ref|ZP_13126046.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|418566028|ref|ZP_13130417.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|418566752|ref|ZP_13131120.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|418570503|ref|ZP_13134771.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|418573446|ref|ZP_13137640.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|418581200|ref|ZP_13145283.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|418595404|ref|ZP_13159018.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|418599346|ref|ZP_13162835.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|418601623|ref|ZP_13165043.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|418639547|ref|ZP_13201792.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|418642050|ref|ZP_13204251.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|418643846|ref|ZP_13206001.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|418646212|ref|ZP_13208323.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|418651241|ref|ZP_13213249.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|418654853|ref|ZP_13216746.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|418656945|ref|ZP_13218729.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|418658745|ref|ZP_13220454.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|418662543|ref|ZP_13224087.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|418874542|ref|ZP_13428808.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|418877374|ref|ZP_13431613.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|418880231|ref|ZP_13434451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|418883158|ref|ZP_13437358.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|418885818|ref|ZP_13439968.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|418891128|ref|ZP_13445245.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|418893984|ref|ZP_13448085.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|418896910|ref|ZP_13450983.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|418899874|ref|ZP_13453933.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|418905107|ref|ZP_13459136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|418908279|ref|ZP_13462287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|418913715|ref|ZP_13467688.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|418916334|ref|ZP_13470297.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|418919339|ref|ZP_13473285.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|418922157|ref|ZP_13476074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|418930554|ref|ZP_13484402.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|418933455|ref|ZP_13487279.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|418980365|ref|ZP_13528148.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|418981392|ref|ZP_13529107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|418985025|ref|ZP_13532715.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|418990419|ref|ZP_13538080.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|419774829|ref|ZP_14300783.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|419785934|ref|ZP_14311678.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|421149287|ref|ZP_15608945.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422744661|ref|ZP_16798616.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|422745104|ref|ZP_16799050.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|424775944|ref|ZP_18202931.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|424784378|ref|ZP_18211188.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|440707559|ref|ZP_20888254.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|440733999|ref|ZP_20913612.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637217|ref|ZP_21121302.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443638292|ref|ZP_21122339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|448741467|ref|ZP_21723431.1| endopeptidase [Staphylococcus aureus KT/314250]
gi|81649908|sp|Q6GBW3.1|CLPC_STAAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81651703|sp|Q6GJE4.1|CLPC_STAAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81706177|sp|Q7A797.1|CLPC_STAAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81782085|sp|Q99W78.1|CLPC_STAAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063320|sp|Q2FJB5.1|CLPC_STAA3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063321|sp|Q2G0P5.1|CLPC_STAA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063323|sp|P0C281.1|CLPC_STAAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|13700415|dbj|BAB41713.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|14246293|dbj|BAB56687.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|49240883|emb|CAG39550.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49243832|emb|CAG42257.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|87126998|gb|ABD21512.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87201844|gb|ABD29654.1| endopeptidase, putative [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740053|gb|ABQ48351.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149945483|gb|ABR51419.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH1]
gi|150373499|dbj|BAF66759.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156720988|dbj|BAF77405.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|160367573|gb|ABX28544.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725142|gb|EES93871.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729461|gb|EES98190.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|257789349|gb|EEV27689.1| endopeptidase [Staphylococcus aureus A9781]
gi|257840287|gb|EEV64750.1| endopeptidase [Staphylococcus aureus A9763]
gi|257843617|gb|EEV68023.1| endopeptidase [Staphylococcus aureus A9719]
gi|257847684|gb|EEV71683.1| endopeptidase [Staphylococcus aureus A9299]
gi|257850757|gb|EEV74702.1| endopeptidase [Staphylococcus aureus A8115]
gi|257854949|gb|EEV77894.1| endopeptidase [Staphylococcus aureus A6300]
gi|257858317|gb|EEV81204.1| endopeptidase [Staphylococcus aureus A6224]
gi|257859616|gb|EEV82466.1| endopeptidase [Staphylococcus aureus A5948]
gi|257864060|gb|EEV86814.1| endopeptidase [Staphylococcus aureus A5937]
gi|262074437|gb|ACY10410.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|269940097|emb|CBI48473.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|282317446|gb|EFB47818.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282325557|gb|EFB55865.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328236|gb|EFB58514.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331727|gb|EFB61238.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282589468|gb|EFB94557.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|282596067|gb|EFC01028.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282762639|gb|EFC02776.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|283469817|emb|CAQ49028.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|283790773|gb|EFC29588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|285816224|gb|ADC36711.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|294822812|gb|EFG39247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|294968132|gb|EFG44158.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295128850|gb|EFG58480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|296886707|gb|EFH25612.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297176873|gb|EFH36131.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297576885|gb|EFH95600.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|302332238|gb|ADL22431.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750416|gb|ADL64593.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339663|gb|EFM05610.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312439057|gb|ADQ78128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829020|emb|CBX33862.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315128816|gb|EFT84815.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193888|gb|EFU24282.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196665|gb|EFU27012.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141611|gb|EFW33450.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141761|gb|EFW33589.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313245|gb|AEB87658.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|329727906|gb|EGG64355.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|329731020|gb|EGG67393.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|329731944|gb|EGG68300.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|334268166|gb|EGL86611.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|334275810|gb|EGL94085.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|334276873|gb|EGL95116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|341841185|gb|EGS82648.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|341843778|gb|EGS84999.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|341844370|gb|EGS85587.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|341851726|gb|EGS92637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|341854333|gb|EGS95204.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|344176766|emb|CCC87228.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|359829604|gb|AEV77582.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|364521779|gb|AEW64529.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|365170702|gb|EHM61663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|365227517|gb|EHM68711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|365236360|gb|EHM77256.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|365236933|gb|EHM77809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|365243778|gb|EHM84446.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|365244323|gb|EHM84984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|371971902|gb|EHO89294.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|371977415|gb|EHO94686.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|371981811|gb|EHO98973.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|371983497|gb|EHP00639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|371984012|gb|EHP01140.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|374362503|gb|AEZ36608.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|374397453|gb|EHQ68663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|374398042|gb|EHQ69240.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|374401543|gb|EHQ72609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|375014250|gb|EHS07942.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|375017187|gb|EHS10809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|375017827|gb|EHS11430.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|375026147|gb|EHS19533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|375027272|gb|EHS20637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|375031945|gb|EHS25205.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|375033412|gb|EHS26605.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|375036042|gb|EHS29129.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|375037645|gb|EHS30664.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|377696082|gb|EHT20438.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|377698332|gb|EHT22680.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|377704956|gb|EHT29264.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|377707212|gb|EHT31505.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|377708157|gb|EHT32448.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|377711984|gb|EHT36207.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|377716271|gb|EHT40454.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|377716421|gb|EHT40603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|377722541|gb|EHT46666.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|377727116|gb|EHT51223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|377732085|gb|EHT56136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|377732669|gb|EHT56719.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|377735480|gb|EHT59510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|377751686|gb|EHT75614.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|377755618|gb|EHT79516.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|377758321|gb|EHT82206.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|377761689|gb|EHT85558.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|377766647|gb|EHT90480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|377767304|gb|EHT91102.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|377771235|gb|EHT94989.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|377771882|gb|EHT95635.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|379991893|gb|EIA13355.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|383361743|gb|EID39109.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|383971330|gb|EID87408.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|384229575|gb|AFH68822.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus 71193]
gi|385195560|emb|CCG15169.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387720914|gb|EIK08805.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387721079|gb|EIK08966.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722489|gb|EIK10287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|387727528|gb|EIK15041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|387729536|gb|EIK16971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731576|gb|EIK18858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|387738379|gb|EIK25422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|387739630|gb|EIK26626.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739792|gb|EIK26775.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746895|gb|EIK33615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|387748305|gb|EIK34994.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387749110|gb|EIK35754.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330204|gb|EJE56296.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|402346723|gb|EJU81800.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|404439399|gb|AFR72592.1| putative stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|408422956|emb|CCJ10367.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408424944|emb|CCJ12331.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408426933|emb|CCJ14296.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408428921|emb|CCJ26086.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408430909|emb|CCJ18224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408432903|emb|CCJ20188.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408434892|emb|CCJ22152.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408436877|emb|CCJ24120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|421956977|gb|EKU09301.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|436431894|gb|ELP29246.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505881|gb|ELP41740.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|443406095|gb|ELS64680.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443409729|gb|ELS68221.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|445547768|gb|ELY16030.1| endopeptidase [Staphylococcus aureus KT/314250]
Length = 818
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|282924437|ref|ZP_06332109.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|418911193|ref|ZP_13465176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|418927840|ref|ZP_13481726.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
gi|282592848|gb|EFB97852.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|377724571|gb|EHT48686.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|377737752|gb|EHT61761.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
Length = 818
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|83999833|emb|CAH60133.1| putative Clp-family ATP-binding protease [Streptomyces
tenjimariensis]
Length = 841
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/738 (58%), Positives = 574/738 (77%), Gaps = 17/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G ST A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSTGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ +++++ + + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMIAKVDERLKDRDMGIELSQDAKILLAKRGYDPVLGARPLRRTIQREIEDVLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDG 826
E++ G V+VD + +G
Sbjct: 789 FGELRPGHIVVVDTEGEG 806
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|417902906|ref|ZP_12546767.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
gi|341850525|gb|EGS91643.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
Length = 818
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/728 (56%), Positives = 560/728 (76%), Gaps = 11/728 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDP++GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPIIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILNGNQI 787
Query: 814 EGDSVIVD 821
EG V VD
Sbjct: 788 EGKKVTVD 795
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAV 164
+V +++G + V
Sbjct: 62 EEVEKLIGHGQDHV 75
>gi|448744005|ref|ZP_21725910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
gi|445562744|gb|ELY18910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
Length = 818
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|152973929|ref|YP_001373446.1| ATPase [Bacillus cytotoxicus NVH 391-98]
gi|152022681|gb|ABS20451.1| ATPase AAA-2 domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 811
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/727 (59%), Positives = 567/727 (77%), Gaps = 10/727 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA G S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEAASGHQGASSTNANTPTLDSLARDLTVIARESRLDPVIGRSKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP++V EPS++E+IQILKGLR+RYE HH++ TD+A+ A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIQVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIEVAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ + K +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEAL-KRNKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YADMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ RL+ ++I L++T+ E + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVKRLEEQEIYLELTDAAIEAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGVIEK 789
Query: 815 GDSVIVD 821
G VI D
Sbjct: 790 GQKVIFD 796
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P I+
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKIQ 61
Query: 151 TQVIRMVGESTE 162
+V ++G TE
Sbjct: 62 KEVEALIGRGTE 73
>gi|418286169|ref|ZP_12898820.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|418924752|ref|ZP_13478655.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
gi|365167723|gb|EHM59100.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|377746047|gb|EHT70018.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
Length = 818
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIQKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|334338866|ref|YP_004543846.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum ruminis
DSM 2154]
gi|334090220|gb|AEG58560.1| ATPase AAA-2 domain protein [Desulfotomaculum ruminis DSM 2154]
Length = 815
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/731 (60%), Positives = 577/731 (78%), Gaps = 11/731 (1%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A +V+ LA EEAR L HNY+G+EH+LLGL+REGEGVAA+VL +LGAD R QVI
Sbjct: 81 TARAKRVLELAVEEARSLNHNYVGTEHILLGLIREGEGVAAQVLISLGADMERARQQVIS 140
Query: 156 MVGESTEAVGAGVGGG----SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
M+G S G G S G K +L+++ +LT LA+E KLDPVVGR +IERV+Q
Sbjct: 141 MMGGSPGGGQPQGGPGHHCPSGGCKTVSLDQFSRDLTSLAKEDKLDPVVGRGKEIERVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTAIAEGLAQ+I G VP+ + ++V+TLD+ +VAGTKYR
Sbjct: 201 VLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIEGSVPEILLNRRVVTLDLAGMVAGTKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFE+RLKK+MEEI+Q+ II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGA
Sbjct: 261 GEFEDRLKKVMEEIRQAGNIIVFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK+IEKD ALERRFQP++V EP+V+ETIQILKG+R++YE HH++ T+EAL +A
Sbjct: 321 TTLDEYRKYIEKDSALERRFQPIQVDEPTVEETIQILKGIRDKYEAHHRVNITNEALEAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A+LS +YI+DRFLPDKAIDLIDE+ SRVR++ P + ++ EK L ++ KEK A+ Q
Sbjct: 381 ARLSDRYITDRFLPDKAIDLIDESASRVRIKAFTTPPDLKDKEKLLVEVRKEKEAAINNQ 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+FEKA ELRDRE L Q+ ++ +E S + + GD G +V+E DI HIV+AWTG+PV
Sbjct: 441 EFEKAAELRDREQKLTLQL----NQARE-SWNQAKGGD-GLIVSEEDIAHIVAAWTGVPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+K++ +ES RLL +EE LH+RVIGQDEAVKA++RA+RRAR GLK+P RP+ SFIF GPTG
Sbjct: 495 KKLAQEESQRLLNLEEALHQRVIGQDEAVKAVARAVRRARAGLKDPKRPVGSFIFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG E+A++R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR
Sbjct: 555 VGKTELARALAEALFGDEDALVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTDSKGR VD +NT++IMTSN+G S ++
Sbjct: 615 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDMRNTVIIMTSNIGLSTLKAT 674
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
G ++GF D+ + Y ++K V E LK+ FRPEFLNR+DE IVF L++ +KEI ++
Sbjct: 675 G-KVGFAASADQSRAEYEKMKERVEEALKRTFRPEFLNRIDESIVFHSLSREHIKEIVNL 733
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
MLKEV R++ ++ L+ +E RER+ E GY+ +GARPLRR I R +ED ++E++L
Sbjct: 734 MLKEVTKRMEDPEVYLEFSEAARERLAETGYSEEFGARPLRREIQRKVEDRLSEELLRGT 793
Query: 812 IKEGDSVIVDV 822
++GD V VDV
Sbjct: 794 FQKGDKVAVDV 804
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE A V++LAQEEARRL + IG+EH+LLGL+RE +G AAR LE +G +
Sbjct: 1 MFHRFTESAKNVLILAQEEARRLKYPLIGTEHILLGLIREDQGFAARALEQMGISADRVA 60
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNKMPTL 180
V ++VG +AV A + + ++ L
Sbjct: 61 QAVEQVVGVGDQAVPAEIPATARAKRVLEL 90
>gi|239988660|ref|ZP_04709324.1| putative ATP-dependent Clp protease [Streptomyces roseosporus NRRL
11379]
gi|291445649|ref|ZP_06585039.1| ATP-dependent Clp protease [Streptomyces roseosporus NRRL 15998]
gi|411006538|ref|ZP_11382867.1| ATP-dependent Clp protease [Streptomyces globisporus C-1027]
gi|291348596|gb|EFE75500.1| ATP-dependent Clp protease [Streptomyces roseosporus NRRL 15998]
Length = 842
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/759 (57%), Positives = 577/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKETAAAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K ++Y R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TNYERMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMLAKVDERLKDRDMGIELSGEAKTLLAKKGYDPVMGARPLRRTIQRQIEDVLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+V + +G+ +L D P+
Sbjct: 789 FGELRPGHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|365866162|ref|ZP_09405787.1| putative ATP-dependent Clp protease [Streptomyces sp. W007]
gi|364004427|gb|EHM25542.1| putative ATP-dependent Clp protease [Streptomyces sp. W007]
Length = 842
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/759 (57%), Positives = 578/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K ++Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TNYERMKTKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMLAKVDERLKDRDMGIELSGEAKMLLAKKGYDPVMGARPLRRTIQRQIEDILSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+V + +G+ +L D P+
Sbjct: 789 FGELRPGHIVVVGTEGEGDDKTFTFRGEEKSALPDVPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|302521030|ref|ZP_07273372.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|318061546|ref|ZP_07980267.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actG]
gi|318076619|ref|ZP_07983951.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actF]
gi|333025279|ref|ZP_08453343.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
gi|302429925|gb|EFL01741.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|332745131|gb|EGJ75572.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
Length = 841
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/759 (57%), Positives = 579/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G T A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQTGKETATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTL+EYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLEEYRKYLEKDAALERRFQPIQVAEPSLAHTIEILKGLRDRYEAHHRVSITDSALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDEELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQEDAVKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+ELAK LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELAKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF + D K + Y R+K+ V +ELKQ+FRPEFLNR+D+ +VF QLT+ ++ I
Sbjct: 671 SK-GFNLGFAVQGDTK-TGYERMKAKVNDELKQHFRPEFLNRVDDTVVFPQLTEKDITRI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ L++++ R+ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMITKVDERLKDRDMGLELSQPARKLLGKRGYDPVLGARPLRRTIQREIEDVLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D PV
Sbjct: 789 FGELRPGHIVVVDTEGEGENENFTFRGEEKSTLPDAPPV 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|384546805|ref|YP_005736058.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|416840758|ref|ZP_11903945.1| endopeptidase [Staphylococcus aureus O11]
gi|416846026|ref|ZP_11906369.1| endopeptidase [Staphylococcus aureus O46]
gi|298693856|gb|ADI97078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|323439794|gb|EGA97511.1| endopeptidase [Staphylococcus aureus O11]
gi|323443104|gb|EGB00724.1| endopeptidase [Staphylococcus aureus O46]
Length = 818
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/728 (56%), Positives = 560/728 (76%), Gaps = 11/728 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVD 821
EG V VD
Sbjct: 788 EGKKVTVD 795
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|418282574|ref|ZP_12895339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
gi|365169575|gb|EHM60821.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
Length = 818
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/730 (56%), Positives = 560/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDNLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+ LH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDALHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|258422629|ref|ZP_05685535.1| endopeptidase [Staphylococcus aureus A9635]
gi|417890327|ref|ZP_12534404.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|418308157|ref|ZP_12919810.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|418559680|ref|ZP_13124215.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|418888425|ref|ZP_13442562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
gi|418993239|ref|ZP_13540878.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|257847201|gb|EEV71209.1| endopeptidase [Staphylococcus aureus A9635]
gi|341855054|gb|EGS95908.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|365241637|gb|EHM82381.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|371974523|gb|EHO91853.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|377747202|gb|EHT71168.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|377754877|gb|EHT78782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
Length = 818
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/730 (56%), Positives = 560/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+ LH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDALHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|224475673|ref|YP_002633279.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222420280|emb|CAL27094.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 821
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/728 (58%), Positives = 558/728 (76%), Gaps = 10/728 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQATKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDTEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q ++ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQ IGATT
Sbjct: 257 FEERLKKVMEEIHQVGDVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQAIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRKHIEKD ALERRFQPV+V EP+V++T+ ILKGLR+RYE HH++ +DEA+ +AA+
Sbjct: 317 LDEYRKHIEKDAALERRFQPVQVDEPTVEDTVSILKGLRDRYEAHHRINISDEAIEAAAR 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPTNLKEIEQEIEKVKNEKDAAVHSQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E A+ G ++E DI +++ WTGIP+ +
Sbjct: 437 ENAANLRDKQTKLEKQYE---DAKNEWKNAQ---GGSNTTLSENDIAEVIAGWTGIPLTR 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES+RLL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 LNETESERLLNLEDTLHERVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT+++MTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGFLTDTKGRRVDFRNTVIVMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF E Y I+S + +ELK FRPEFLNR+D++IVF +L K E+KEI M+
Sbjct: 670 FTGFGGGSSEG-QDYETIRSTMLKELKNAFRPEFLNRVDDIIVFHKLNKDELKEIVTKMV 728
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ DRL +DI + VTE+ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 729 NKLTDRLSEQDINISVTEKAKEKIAEEGYDPQYGARPLIRAIQKTVEDNLSELILDGNQL 788
Query: 814 EGDSVIVD 821
EG V+VD
Sbjct: 789 EGKDVVVD 796
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ G +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFGITEDLVV 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G+ E VG
Sbjct: 62 AEVEKLIGQGQEQVG 76
>gi|256831690|ref|YP_003160417.1| ATPase AAA-2 domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256685221|gb|ACV08114.1| ATPase AAA-2 domain protein [Jonesia denitrificans DSM 20603]
Length = 842
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/737 (58%), Positives = 571/737 (77%), Gaps = 16/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLTKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + E VG+G + L+++G NLT+ A EGKLDPV+GR +IERV+Q+
Sbjct: 140 QLLSGYQGKEPVGSGAPNEPTPAGSAVLDQFGRNLTQAAREGKLDPVIGRGKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPILIGEPGVGKTAVVEGLAQDIVAGDVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ +GAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTVGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKHIEKDPALERRFQP++V EPS+ I+ILKGLR+RYE HH++ TD+ALV+AA
Sbjct: 320 TLDEYRKHIEKDPALERRFQPIQVAEPSLPHAIEILKGLRDRYEAHHRVSITDDALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YI+DR+LPDKAIDL+DEAG+R+R+R P E REL++ + +EK A+ QD
Sbjct: 380 TLADRYINDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDERIADARREKESAIDEQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E +L I DK K + + V+EVD I +++ TGI
Sbjct: 440 FEKAAALRDKEKNL---IQERQDKEKAWKNGDLD------TVSEVDEDLIAEVLAMSTGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV +++ +ES R+L ME LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVTRLNAEESQRILNMEAELHKRVVGQNRAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELAKALA Y F E+A+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE V
Sbjct: 551 TGVGKTELAKALAEYLFDDEDALIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAH D+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+GS +
Sbjct: 611 RRKPFSVVLFDEVEKAHADIFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGSKDVA 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G ++GF+++ D ++Y R+KS V EELKQ+FRPEFLNR+D++IVF QL++ E+ +I
Sbjct: 671 K-GVQVGFNVNNDAT-TTYERMKSKVNEELKQHFRPEFLNRVDDVIVFPQLSREEILKIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ ++ RL K + +++T+ ++ + E+GY+P GARPLRRAI R +ED ++EK+L
Sbjct: 729 DLMVAKLNVRLADKAMSIELTDAAKKLLSEKGYDPVLGARPLRRAIQRDIEDVLSEKLLF 788
Query: 810 REIKEGDSVIVDVDSDG 826
E GD ++VD +G
Sbjct: 789 GEFGAGDIIVVDAQGEG 805
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++GE +A
Sbjct: 61 SQVTEIIGEGQQA 73
>gi|253315634|ref|ZP_04838847.1| endopeptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 818
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/730 (56%), Positives = 561/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLFEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|418954707|ref|ZP_13506663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
gi|375372472|gb|EHS76212.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
Length = 818
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/730 (56%), Positives = 560/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YG RPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGTRPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|1314297|gb|AAC44446.1| ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/737 (57%), Positives = 571/737 (77%), Gaps = 8/737 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G +A GAG + PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLG-GGDATGAGRQTNTQAT--PTLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+KV EP+V+E+IQIL GLR+RYE HH++ TDEAL +A +
Sbjct: 316 LDEYRKYIEKDRALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDE+GS+VRL+ P+ +E+E L + KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E LK + + + + E + D V ++ + +V++WTGIPV K
Sbjct: 436 EKAASLRDKEQKLKKSLDKKSLEETKANWQEKQGLDHSEVTEDI-VAEVVASWTGIPVAK 494
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E+++LL ME+ LH+RVIGQD AVKA+S A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 495 LAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVG 554
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG E++MIR+DMSE+ME+ + ++L+G+PPGYVGY EGGQLTE VR++P
Sbjct: 555 KTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKP 614
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSN+G+ + K +
Sbjct: 615 YSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEM-KQDK 673
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF++ KD + ++ V ++LKQ FRPEF+NR+DE IVF L + E+K+I ++
Sbjct: 674 SMGFNVTDPLKD--HKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLT 731
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RL +DI +++TE + ++ ++GY+P YGARPL+RAI + +ED ++E++L IK
Sbjct: 732 AQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIK 791
Query: 814 EGDSVIVDVDSDGNVTV 830
GD V + V DG + V
Sbjct: 792 VGDYVEIGV-KDGKLEV 807
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L LG ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++G +AV
Sbjct: 62 QEVEGLIGHGEKAV 75
>gi|145596784|ref|YP_001161081.1| ATPase [Salinispora tropica CNB-440]
gi|145306121|gb|ABP56703.1| ATPase AAA-2 domain protein [Salinispora tropica CNB-440]
Length = 844
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/762 (57%), Positives = 583/762 (76%), Gaps = 21/762 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ + E AG G + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKEPAAAGTAPGEAAPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGL+QRI G+VP+T++ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLSQRIVKGEVPETLKDKQLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVGEPSLPHTIEILKGLRDRYEAHHRVSITDAALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFE+A +LRD E L Q K + E +AGD+ VVTEVD I ++ WTG
Sbjct: 440 DFERAAQLRDTEKQLLGQ--------KAQREKEWKAGDLD-VVTEVDDEQIAEVLGNWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ +
Sbjct: 611 VRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDV 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF D+ DS+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL E+ I
Sbjct: 671 AK-AVSLGFQAS-DDSDSNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHREILSI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
DIM+ + +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++L
Sbjct: 729 VDIMIGRIETQLRNKDMGLELTDNAKQYLATKGFDPVLGARPLRRTIQRDIEDNLSERIL 788
Query: 809 AREIKEGDSVIVDVDSD----GNVTVLNGSSGAPESLADPLP 846
E+ G VIVD D D + T+ + P L D +P
Sbjct: 789 FNELNPGQIVIVDCDGDPTNIDSSTLTFRGTDKPADLPDAVP 830
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|257432644|ref|ZP_05609004.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
gi|257282059|gb|EEV12194.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
Length = 818
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/730 (56%), Positives = 560/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGI + K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGITLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLG+++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGVMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|269955171|ref|YP_003324960.1| ATPase AAA-2 domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269303852|gb|ACZ29402.1| ATPase AAA-2 domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 852
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/741 (58%), Positives = 577/741 (77%), Gaps = 24/741 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL +GAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLTKMGADLNKVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G G SG+ + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPVAAGGPAEGQPSGSAV--LDQFGRNLTQAAREGKLDPVIGRSKEIERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP++V EPS+ I+ILKGLR+RYE HH++ TD ALV+
Sbjct: 318 ATTLDEYRKYVEKDPALERRFQPIQVAEPSLQHAIEILKGLRDRYEAHHRVSITDSALVT 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P E + L++E+ + +EK A+
Sbjct: 378 AATLADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPELKVLDEEISEARREKESAIDE 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVT--EVDIQHIVSAWTG 508
QDFEKA LRD+E L A K E +A ++GD+ V T E + +++ TG
Sbjct: 438 QDFEKAAGLRDKEKQLTA-------KRAERERA-WKSGDLDTVATVDEELVAEVLAMSTG 489
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+MEE LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 490 IPVVKLTEEESGRLLRMEEELHKRVVGQEAAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 549
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 550 PTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTEK 609
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAH D+FN +LQ+LEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 610 VRRKPFSVVLFDEVEKAHADIFNSLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 669
Query: 689 EKG---GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
KG G + G DL +SY R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ E+
Sbjct: 670 AKGVQTGFQAGGDL-----VTSYERMKAKVNEELKQHFRPEFLNRVDDVVVFPQLTQKEI 724
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
EI D+ + ++ RL+ KD+ +++T+ + + E+GY+P GARPL+RAI R +ED+++E
Sbjct: 725 VEIVDLEIAKLDKRLRDKDMAIELTDAAKNLLAEKGYDPVLGARPLKRAIQREIEDTLSE 784
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L ++K G ++VD + +G
Sbjct: 785 KILFGDLKPGQIIVVDGEGEG 805
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++GE +A
Sbjct: 61 SQVTEIIGEGQQA 73
>gi|345000382|ref|YP_004803236.1| ATPase AAA-2 domain-containing protein [Streptomyces sp. SirexAA-E]
gi|344316008|gb|AEN10696.1| ATPase AAA-2 domain protein [Streptomyces sp. SirexAA-E]
Length = 842
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/759 (57%), Positives = 578/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K ++Y R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TNYERMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMVAKVDERLKDRDMGIELSAEAKSLLAKKGYDPVMGARPLRRTIQREIEDILSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+V + +G+ + +L D P+
Sbjct: 789 FGELRPGHIVVVGTEGEGDDKKFSFRGEEKSALPDVPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|78043878|ref|YP_361153.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
gi|77995993|gb|ABB14892.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
Length = 811
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/739 (60%), Positives = 588/739 (79%), Gaps = 13/739 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V+ L+ +EA R GHNY+G+EHLLLGL+REGEGVAARVL +LGAD +R ++
Sbjct: 80 FTPRAKRVLELSVDEAARFGHNYVGTEHLLLGLIREGEGVAARVLVSLGADLERVRAEIT 139
Query: 155 RMVGESTEAVGAGVGGGSSGNK---MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ +G GG + K PTL+E+G +LT LA E KLDPVVGR+ +IERV+Q
Sbjct: 140 QVLSGGPIPGTSGQAGGQAKKKAVRTPTLDEHGRDLTALARENKLDPVVGREKEIERVIQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTAI EGLAQRI VP+ + K+V+TLD+ +VAGTKYR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVQKKVPEILIDKRVVTLDLASMVAGTKYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEERLKK++EEIK + +I+FIDE+HTLIGAGAAEGAIDAANILKPSLARGE+QC+GA
Sbjct: 260 GEFEERLKKVLEEIKNAGNVIVFIDEIHTLIGAGAAEGAIDAANILKPSLARGEIQCVGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK+IEKDPALERRFQP+ V EP+V+ET++ILKGLR+RYE HH+++ TDEA+++A
Sbjct: 320 TTLDEYRKYIEKDPALERRFQPIMVDEPTVEETVEILKGLRDRYEAHHRVKITDEAIIAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A+LS +YI+DRFLPDKAIDLIDEA SRVRL P +ELE+++ +I KEK AV Q
Sbjct: 380 AKLSDRYITDRFLPDKAIDLIDEAASRVRLNAFTAPPNLKELEEKINEIRKEKEAAVAAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+FEKA +LRD+E LKA++ + + E E D VTE DI IVS WTGIPV
Sbjct: 440 EFEKAAKLRDQEQKLKAELEE------KKKEWEKEQSDHLLSVTEDDIAQIVSQWTGIPV 493
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+K++ +ES+RLLK+EE LH+RVIGQDEAVKA++RA+RRAR GLK+P RPI SFIF GPTG
Sbjct: 494 KKLAEEESERLLKLEEILHQRVIGQDEAVKAVARAVRRARAGLKDPKRPIGSFIFLGPTG 553
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG E+A+IR+DMSE+ME+HTV++LIG+PPGYVGY EGGQLTEAVRR
Sbjct: 554 VGKTELARALAEALFGDEDALIRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRR 613
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+V+L DEIEKAHP+VFN++LQ+LEDGRLTDSKGRTVDFKNT++IMTSN+G+ +I+K
Sbjct: 614 KPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFKNTVIIMTSNIGAHLIKKE 673
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
R+GF + ++ + + L+ ELK+ FRPEFLNR+DE+IVF LT+ +K+I +
Sbjct: 674 A-RLGFK-NVADEKKEEDIKEKLMA-ELKRTFRPEFLNRIDEIIVFHSLTEEHLKQIVRL 730
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
MLKEV RL+ ++++++ + E +++EGY+ ++GARPLRRAI +++ED ++E++L
Sbjct: 731 MLKEVGKRLEEQEMKVEFDDSLIEVILKEGYDEAFGARPLRRAIQKIVEDKLSEELLLGN 790
Query: 812 IKEGDSVIVDVDSDGNVTV 830
IK+GD+V + + DG + V
Sbjct: 791 IKKGDTVKLYAE-DGQIKV 808
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF++FT++A KVI +AQEEAR++ + Y+ +EHLLLG++ EGE VAA+VLENLG D +R
Sbjct: 1 MFDKFTQRAQKVIRMAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVR 60
Query: 151 TQVIRMVG 158
+++ +VG
Sbjct: 61 EKILELVG 68
>gi|229027929|ref|ZP_04184082.1| Negative regulator of genetic competence [Bacillus cereus AH1271]
gi|228733317|gb|EEL84146.1| Negative regulator of genetic competence [Bacillus cereus AH1271]
Length = 811
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/731 (59%), Positives = 572/731 (78%), Gaps = 10/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KVI L+ +EAR+LGH+Y+G+EH+LLGL+REGEGVAARVL NLG + R QV+
Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++G S EA GG S+ PTL+ +LT +A E +LDPV+GR +I+RV+++L
Sbjct: 140 QLLG-SNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I + +VP+T+ K+V+TLDMG +VAGTKYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+M+EI+Q+ IILFIDE+HTLIGAG AEGAIDA+NILKPSLARGELQCIGATTL
Sbjct: 259 EDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EPS+DE+ QILKGLR+RYE HH++ TD+A+ +A +L
Sbjct: 319 DEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S+VRLR P +ELE +L +I KEK+ AV+ Q+FE
Sbjct: 379 SDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELELKLEEIRKEKDAAVQSQEFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD E L+ ++ + KE E VT DI ++VS WT IPV K+
Sbjct: 439 KAASLRDMEQRLREKLEDTKRQWKEQQGKENSE------VTVEDIANVVSTWTRIPVSKL 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+D+LL +E LH RVIGQDEAV A+++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 493 AQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA FG E+AMIR+DMSE+ME+H+ S+L+GSPPGYVGY EGGQLTE VRR+PY
Sbjct: 553 TELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVL DE+EKAHPDVFN++LQ+LEDGRLTDSKGRTVDF+NT++IMTSNVG+ +++ +
Sbjct: 613 SVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGADALKR-NKH 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF++ + +D Y+ +K V +ELK+ FRPEFLNR+DE+IVF L K ++EI +M+
Sbjct: 672 LGFNVQDESRD--YSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHIQEIVTLMVN 729
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RLK ++IEL +TE + ++G++ YGARPLRRAI + +ED ++E++L I++
Sbjct: 730 QLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEK 789
Query: 815 GDSVIVDVDSD 825
G VI DV+ +
Sbjct: 790 GQKVIFDVEGE 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ L+QEEA R+GHN IG+EH+LLGL+REGEG+AA+ L LG P ++
Sbjct: 2 MFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQ 61
Query: 151 TQVIRMVGESTEA 163
+V ++G TEA
Sbjct: 62 KEVEALIGRGTEA 74
>gi|308175906|ref|YP_003915312.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
gi|307743369|emb|CBT74341.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
Length = 840
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/763 (57%), Positives = 574/763 (75%), Gaps = 21/763 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 83 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQQVI 142
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++ G+ T + G GG G + L+++G NLT A EGKLDPV+GR+ ++E
Sbjct: 143 QLLSGYQGGKETASAGVSSGGQQEGTPAGSAVLDQFGRNLTAAAREGKLDPVIGREHEME 202
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG
Sbjct: 203 RVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVRGDVPETIKDKQLYTLDLGSLVAG 262
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 263 SRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQ 322
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRK+IEKD ALERRFQP++V EPSV+ T QIL+GLR+RYE HH++ TD A
Sbjct: 323 TIGATTLDEYRKNIEKDAALERRFQPIQVKEPSVELTTQILRGLRDRYEAHHRVTITDGA 382
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
L +AA L+++YISDRFLPDKA+DLIDEAG+R+R++ P +E+++E+ + EK A
Sbjct: 383 LQAAATLAHRYISDRFLPDKAVDLIDEAGARLRIQRMTAPPALKEMDEEIATVRLEKEAA 442
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSA 505
+ QDFE A LRD+E S L++ E K+ GD+ V VTE I +++
Sbjct: 443 IDAQDFEGAASLRDKE-------SKLIEARNEKEKS-WRNGDMDEVSEVTEELIAEVLAN 494
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ +ES RLL ME+ LHKRVIGQD A+KAIS+AIRR R GLK+PNRP SFI
Sbjct: 495 STGIPVVKLTEEESSRLLNMEDELHKRVIGQDSAIKAISQAIRRTRAGLKDPNRPGGSFI 554
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG EEA+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQL
Sbjct: 555 FAGPTGVGKTELAKALAEFLFGEEEALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQL 614
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 615 TEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGT 674
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D K + Y R+++ V EEL+Q+FRPEFLNR+D+ +VF QL + E+
Sbjct: 675 RDISK-GVMTGFQSAADTK-TGYERMQAKVQEELRQHFRPEFLNRVDDTVVFPQLNQDEI 732
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+EI D+ + + RLK +D+ +++T+ R + + GY+P+ GARPLRR I R +ED ++E
Sbjct: 733 EEIVDLFVARLAKRLKDRDMTIELTQAARSLLAQRGYDPAMGARPLRRTIQRDIEDQLSE 792
Query: 806 KMLAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLP 846
++L +I G + VDV+ +G + V + G + +P P
Sbjct: 793 RILFGQIVAGQKITVDVEGEGELQKFVFHAEGGTGQLEGEPAP 835
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EG+GVAA+ LE+L +R
Sbjct: 4 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGDGVAAKALESLNISLGAVR 63
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 64 EQVQEIIGKGQQA 76
>gi|262049567|ref|ZP_06022436.1| endopeptidase [Staphylococcus aureus D30]
gi|259162307|gb|EEW46880.1| endopeptidase [Staphylococcus aureus D30]
Length = 818
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/730 (56%), Positives = 560/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LD V+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDSVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|336321879|ref|YP_004601847.1| ATPase AAA [[Cellvibrio] gilvus ATCC 13127]
gi|336105460|gb|AEI13279.1| ATPase AAA-2 domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 860
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/742 (58%), Positives = 574/742 (77%), Gaps = 26/742 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLNKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
++V G+ A G G SG+ + L+++G NLT+ A + KLDPV+GR+ +IERV+
Sbjct: 140 QLVSGYQGKEPVAAGGPQEGQPSGSAV--LDQFGRNLTQAARDNKLDPVIGREKEIERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+
Sbjct: 318 ATTLDEYRKYVEKDPALERRFQPIQVAEPNLQHAIEILKGLRDRYEAHHRVSITDSALVA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +Y++DR+LPDKAIDL+DEAG+R+R+R P E REL++E+ ++K A+
Sbjct: 378 AATLADRYVNDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDEEIANTRRDKESAIDE 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L K E KA ++GD+ V EVD I +++ T
Sbjct: 438 QDFEKAARLRDQEKQLGL-------KRAEKEKA-WKSGDLD-AVAEVDEELIAEVLANAT 488
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 489 GIPVFKLTEEESSRLLHMEDNLHKRVVGQNAAIKALSQAIRRTRAGLKDPKRPGGSFIFA 548
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 549 GPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTE 608
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 609 KVRRRPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 668
Query: 688 IEKG---GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I KG G + G DL D Y R+K+ V +ELK +FRPEFLNR+D+++VF QL++ E
Sbjct: 669 IAKGVMTGFQAGGDLSTD-----YERMKAKVNDELKTHFRPEFLNRVDDVVVFPQLSQPE 723
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ I D+M+ ++ RL+ KD+ L++T ++ + E+GY+P GARPLRRAI R +ED+++
Sbjct: 724 IFSIVDLMIAKLDQRLRDKDMGLEITPAAKKLLSEKGYDPVLGARPLRRAIQREIEDALS 783
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L E+K G VIVD + +G
Sbjct: 784 EKILFGELKAGQQVIVDAEGEG 805
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++GE +A
Sbjct: 61 AQVQEIIGEGQQA 73
>gi|256826231|ref|YP_003150191.1| ATPase with chaperone activity [Kytococcus sedentarius DSM 20547]
gi|256689624|gb|ACV07426.1| ATPase with chaperone activity, ATP-binding subunit [Kytococcus
sedentarius DSM 20547]
Length = 866
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/739 (58%), Positives = 566/739 (76%), Gaps = 19/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
F+ +A KV+ L+ E +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FSPRAKKVLELSLREGLQLGHQYIGTEHILLGLIREGEGVAAQVLVKLGADLSTVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGG-GSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ G E AGVG G P L+++G NLT+ A EGKLDPV+GR+ +
Sbjct: 140 ELLSGYQGGQGEPQAAGVGASGGQAEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGRETE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K V TLD+G LV
Sbjct: 200 IERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAADIVAGTVPETLKDKHVYTLDLGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAANILKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAANILKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATTL+EYRKHIEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTLEEYRKHIEKDAALERRFQPIQVNEPSLAHAIEILKGLRDRYEAHHRVSITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL SA ++ +Y++DRFLPDKAIDLIDEAG+R+R++ P + RE+++++ + +EK
Sbjct: 380 GALASAVNMADRYVNDRFLPDKAIDLIDEAGARLRIQRMTAPPDLREIDEKIANVRREKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVS 504
A+ GQDFEKA LRD E L L ++G E KA E DV VV E I +++
Sbjct: 440 SAIDGQDFEKAASLRDDEQKL------LNERG-EREKAWKEGDQDVAAVVDEDVIAEVLA 492
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
A TGIPV ++S +ES RLLKME+ LHKR++G D+A+ A+S+AIRR R GLK+P RP SF
Sbjct: 493 ATTGIPVFRISEEESSRLLKMEDELHKRIVGMDDAIHALSQAIRRTRAGLKDPRRPGGSF 552
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS++ GSPPGYVGY EGGQ
Sbjct: 553 IFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFGEKHTVSRMFGSPPGYVGYDEGGQ 612
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GRTVDFKNT++IMT+N+G
Sbjct: 613 LTEKVRRKPFSVVLFDEVEKAHPDVFNSLLQILEDGRLTDSQGRTVDFKNTIIIMTTNLG 672
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K G +GF E + Y R+K+ V+EELKQ+FRPEFLNR+D+ +VF QL++ E
Sbjct: 673 ARDIAK-GVSLGFSAG-PESGTDYERLKAKVSEELKQHFRPEFLNRVDDTVVFPQLSQAE 730
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+M+ + +RL KD+ +++T+ +E + + GY+P GARPLRRAI R +ED ++
Sbjct: 731 IVQIVDLMIDRLSERLADKDMAIELTQDAKELLAKRGYDPVLGARPLRRAIQREIEDVIS 790
Query: 805 EKMLAREIKEGDSVIVDVD 823
EK+L E GD + VDVD
Sbjct: 791 EKILYGEFAAGDIIEVDVD 809
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNY+G+EH+LLGL+ EGEG+AA+ LENLG +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARMLNHNYLGTEHILLGLIHEGEGIAAQALENLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEVIGQGKQA 73
>gi|319891481|ref|YP_004148356.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|386320177|ref|YP_006016340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
gi|317161177|gb|ADV04720.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|323465348|gb|ADX77501.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
Length = 819
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/734 (58%), Positives = 561/734 (76%), Gaps = 15/734 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLQHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A +G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQSAKSNN-TPTLDGLARDLTVIARDGTLDPVVGRNSEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++GK+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI + +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHHAGNVILFIDEMHTLIGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRKHIEKD ALERRFQPV+V EPSV +TI ILKGLR+RYE HH++ +DEA+ +AA+
Sbjct: 317 LDEYRKHIEKDAALERRFQPVQVNEPSVADTIAILKGLRDRYEAHHRINISDEAVEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+ DRFLPDKAIDLIDEA S+VRL+ P +E+E+++ Q+ KEK+ AV Q+F
Sbjct: 377 LSDRYVQDRFLPDKAIDLIDEASSKVRLKSHTTPTNLKEIEQQIEQVKKEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV--DIQHIVSAWTGIPV 511
E A LRD++ L+ Q E +K E + G T V DI +++ WTGIP+
Sbjct: 437 ENAANLRDKQTKLEKQY--------EEAKNEWQNHQGGQHTTLVAEDIAEVIAGWTGIPL 488
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+++ ES+RLL +E+TLH+RVIGQ++AV AIS+A+RRAR GLK+P RPI SFIF GPTG
Sbjct: 489 TRLNETESERLLNLEDTLHERVIGQNDAVIAISKAVRRARAGLKDPKRPIGSFIFLGPTG 548
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR
Sbjct: 549 VGKTELARALAEAMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRR 608
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++
Sbjct: 609 KPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD- 667
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
R GF + +D Y I+ + +ELK FRPEFLNR+D+ IVF +L K E+KEI +
Sbjct: 668 QRFAGFGGSSEGQD--YETIRKTMMKELKSAFRPEFLNRVDDTIVFHKLNKDELKEIVTM 725
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M+ ++ RL ++I ++VTE ++++ EEGY+P YGARPL RAI + +ED+++E +L +
Sbjct: 726 MVGKLTSRLSEQNINVRVTEAAKDKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILEGK 785
Query: 812 IKEGDSVIVDVDSD 825
EG +V VD D +
Sbjct: 786 ELEGKNVTVDYDGE 799
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFDITEDKVI 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G E +GA
Sbjct: 62 EEVEKLIGHGQEQMGA 77
>gi|357412696|ref|YP_004924432.1| ATPase AAA [Streptomyces flavogriseus ATCC 33331]
gi|320010065|gb|ADW04915.1| ATPase AAA-2 domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 841
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/759 (57%), Positives = 578/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K ++Y R+K V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TNYERMKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMVAKVDERLKDRDMGIELSAEAKSLLAKKGYDPVMGARPLRRTIQREIEDILSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+V + +G+ + +L D P+
Sbjct: 789 FGELRPGHIVVVGTEGEGDEKKFSFRGEEKSALPDVPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|150392194|ref|YP_001322243.1| ATPase [Alkaliphilus metalliredigens QYMF]
gi|149952056|gb|ABR50584.1| ATPase AAA-2 domain protein [Alkaliphilus metalliredigens QYMF]
Length = 812
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/740 (56%), Positives = 562/740 (75%), Gaps = 10/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V L+ E R L +YIG+EHLLLGL+REGEG+AA+VL LG D R +VI
Sbjct: 81 FTPRTKRVFELSFAETRSLNQSYIGTEHLLLGLIREGEGIAAKVLIELGVDLKKAREEVI 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ + S P L++YG +L +++ EGKLDP++GR+ +I+RV+Q+L
Sbjct: 141 KIINSAGSHPNTAKPKTSPKGNTPALDQYGRDLNEMSREGKLDPIIGRRIEIDRVIQVLS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G+VP+ + GK+V+ LD+ ++AGTKYRGEF
Sbjct: 201 RRTKNNPCLIGEPGVGKTAIAEGLAQKIEEGNVPEMLTGKRVVNLDVASMIAGTKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EER+KK+M E++ S ++ILFIDE+HT+IGAGAAEGA+DAANILKP+LARGELQ IGATTL
Sbjct: 261 EERMKKIMTELRDSTDVILFIDEIHTIIGAGAAEGAMDAANILKPALARGELQVIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DE+RKH EKD ALERRFQP+ V EP+V++TI+IL GLR+RYE HH+++ TDEAL +AA+L
Sbjct: 321 DEFRKHFEKDAALERRFQPITVEEPTVEDTIKILAGLRDRYEAHHRVKITDEALEAAAEL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DR+LPDKAIDLIDEA S++R+ P R LE + ++ KEK EA+ QDFE
Sbjct: 381 SDRYIMDRYLPDKAIDLIDEAASKIRIETVTAPPNLRTLEDNIEKLAKEKEEAISIQDFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A ++RD E + + + K K S E G VG +I IVS+WTG+PV K+
Sbjct: 441 RAAKIRDEEKKSREDLDSAQRKWK--SSKENRNGIVGA----EEIAQIVSSWTGVPVMKL 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ES RLLK+EE LH RVIGQ+ AVK+IS+AIRRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 495 QEEESQRLLKLEEALHHRVIGQEPAVKSISQAIRRARVGLKDPKRPIGSFIFLGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL++ALA FG E+AMIR+DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLTE VRR+PY
Sbjct: 555 TELSRALAEVMFGDEDAMIRIDMSEYMEKHTVSRLIGSPPGYVGFNEGGQLTEKVRRKPY 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQIL+DGRLTD++GR ++FKNT++IMTSNVG+ I+K R
Sbjct: 615 SVVLFDEIEKAHPDVFNVLLQILDDGRLTDAQGRMINFKNTVIIMTSNVGAHTIKK-QRI 673
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF D+ + Y ++K V +EL++ FRPEFLNR+D+ IVF L + + +I D+M+
Sbjct: 674 LGFSATVEDQAKNEYEKMKENVMDELRKTFRPEFLNRIDDSIVFHGLEREHIHQIVDLMI 733
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ RLK +I ++VTE + +V++G++P YGARPL+RAI +++ED ++E++L I+
Sbjct: 734 GDLKKRLKALNINIEVTEATKNHIVDQGFDPQYGARPLKRAIQKIVEDPLSEELLQGTIR 793
Query: 814 EGDSVIVDVDSDGNVTVLNG 833
G + V+VD G ++N
Sbjct: 794 NGQT--VNVDYQGEKLLINA 811
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 54/69 (78%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
AMF +FTE+A KVI+L+Q+ A+ LGHNY+G+EHLLLGL+ EGEGVA + L+NLG +
Sbjct: 2 AMFGKFTERAQKVIVLSQQAAQALGHNYVGTEHLLLGLIDEGEGVAFQALKNLGVASDQL 61
Query: 150 RTQVIRMVG 158
+ +V+ VG
Sbjct: 62 KKKVVSYVG 70
>gi|453050790|gb|EME98316.1| putative ATP-dependent Clp protease [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 841
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/758 (57%), Positives = 574/758 (75%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I
Sbjct: 671 K-GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RL+ +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 DLMIAKVDERLRDRDMGIELSGDAKQLLAKRGYDPILGARPLRRTIQREIEDILSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+V + +G +L D PV
Sbjct: 789 GELRPGHIVVVGTEGEGEEKKFTFRGEEKSALPDTPPV 826
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|404416854|ref|ZP_10998667.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
gi|403490742|gb|EJY96274.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
Length = 824
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/731 (57%), Positives = 556/731 (76%), Gaps = 12/731 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALG-SPEMNNKNAQANKSNN-TPTLDSLARDLTVIAKDGTLDPVIGRDQEITRVIEVL 196
Query: 214 GRRT-KNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
RRT KNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRG
Sbjct: 197 SRRTTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKNKRVMSLDMGTVVAGTKYRG 256
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEERLKK+MEEI Q+ ++LFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGAT
Sbjct: 257 EFEERLKKVMEEIHQAGNVVLFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGAT 316
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK+IEKD ALERRFQPV+V EP+V++T++ILKGLR+RYE HH++ +D+A+ +A
Sbjct: 317 TLDEYRKNIEKDAALERRFQPVQVDEPTVEDTVEILKGLRDRYEAHHRINISDQAVEAAV 376
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QLS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+ + Q+ EK+ AV Q+
Sbjct: 377 QLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPPNLKEIEQHIEQVKNEKDAAVHAQE 436
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FE A LRD++ L+ Q + K E A ++E DI +++ WTGIP+
Sbjct: 437 FENAANLRDKQTKLEKQYEEATNNWKNAQNGENTA------LSEEDIAEVIAGWTGIPLT 490
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ ES RLL +E+TLH RVIGQ EAV +IS+A+RRAR GLK+P RPI SFIF GPTGV
Sbjct: 491 KINETESQRLLNLEDTLHDRVIGQKEAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGV 550
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+ALA FG E+AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+
Sbjct: 551 GKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRK 610
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT++IMTSNVG+ ++
Sbjct: 611 PYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQD-Q 669
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+ GF E+ Y I+ + +ELK FRPEFLNR+D++IVF +L K E+KEI +M
Sbjct: 670 KFAGF--GGAEEGQDYETIRKTMLKELKNAFRPEFLNRVDDIIVFHKLDKDELKEIVTMM 727
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
+ ++ +RL +DI + VT+ +E++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 VNKLTERLSEQDISISVTDTAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNK 787
Query: 813 KEGDSVIVDVD 823
EG V++D D
Sbjct: 788 IEGKDVVIDHD 798
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFEITEEKVV 61
Query: 151 TQVIRMVGESTEAVGA 166
+V +++G E +GA
Sbjct: 62 EEVEKLIGHGQEQMGA 77
>gi|408826980|ref|ZP_11211870.1| ATPase AAA [Streptomyces somaliensis DSM 40738]
Length = 841
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/738 (58%), Positives = 572/738 (77%), Gaps = 17/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G S A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E +AGD+ VV EVD I +++ TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDGELIAEVLATATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I
Sbjct: 671 SK-GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ ++++ + + ++GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMVAKVDERLKDRDMGIELSGDAKILLAKKGYDPVLGARPLRRTIQREIEDVLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDG 826
E++ G V+VD + +G
Sbjct: 789 FGELRPGHIVVVDTEGEG 806
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|29829142|ref|NP_823776.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|29606248|dbj|BAC70311.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 842
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/759 (57%), Positives = 578/759 (76%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT---LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ + + V GG + T L+++G NLT+ A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYHQGKESTVEGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEY+K++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV A
Sbjct: 320 TTLDEYKKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +Y+SDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +K A+ Q
Sbjct: 380 ATLADRYVSDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRHDKESAIDSQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD+E L A K + E + GD+ VV EVD I +++A TG
Sbjct: 440 DFEKAASLRDKEKQLLA--------AKAKREKEWKTGDMD-VVAEVDGELIAEVLAASTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RLL+ME+ LHKRVIGQ +AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL++ALA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSRALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G +GF D K S+Y R+K+ V +ELK++FRPEFLNR+D+++VF QLT+ ++ I
Sbjct: 671 SK-GFNLGFAAQGDSK-STYERMKNKVADELKRHFRPEFLNRVDDVVVFPQLTRDDILAI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ +V +RLK +D+ +++ + +E + ++GY+P GARPLRR I R +ED+++EK+L
Sbjct: 729 VDLMITKVDERLKDRDMGIELAQSAKELLAQKGYDPMLGARPLRRTIQREIEDTLSEKIL 788
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 FGELRPGHIVVVDTEGEGETKTFTFRGEEKSALPDVPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|21282209|ref|NP_645297.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300912852|ref|ZP_07130294.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|418987425|ref|ZP_13535098.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
gi|81762804|sp|Q8NXY8.1|CLPC_STAAW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300885956|gb|EFK81159.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|377719213|gb|EHT43383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
Length = 818
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/730 (56%), Positives = 560/730 (76%), Gaps = 11/730 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G + S N PTL+ +LT +A++G LDPV+GR +I RV+++L
Sbjct: 139 VKALGNP--EMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I + +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI+Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +
Sbjct: 317 LDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+P GYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPLGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF D +D Y I+ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGFGGSSDGQD--YETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL ++I + VT++ ++++ EEGY+P YGARPL RAI + +ED+++E +L
Sbjct: 728 NKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQI 787
Query: 814 EGDSVIVDVD 823
EG V VD D
Sbjct: 788 EGKKVTVDHD 797
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G + VG
Sbjct: 62 EEVEKLIGHGQDHVG 76
>gi|302544384|ref|ZP_07296726.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
hygroscopicus ATCC 53653]
gi|302462002|gb|EFL25095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
himastatinicus ATCC 53653]
Length = 840
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/758 (57%), Positives = 574/758 (75%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FE A LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEMAAGLRDKEKQLLA--------AKAKREKEWKAGDMD-VVAEVDEELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAAQGDVK-TGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 DLMITKVDERLKDRDMGIELSGVAKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRPGHIVVVDTEGEGEEKKFTFRGEEKSALPDTPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|345016096|ref|YP_004818450.1| ATPase AAA [Streptomyces violaceusniger Tu 4113]
gi|344042445|gb|AEM88170.1| ATPase AAA-2 domain protein [Streptomyces violaceusniger Tu 4113]
Length = 841
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/758 (57%), Positives = 573/758 (75%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FE A LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEMAAGLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +I
Sbjct: 671 K-GFNLGFAAQGDVK-TGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M +V +RLK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 DLMTTKVDERLKDRDMGIELSGEAKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRSGHIVVVDTEGEGEEKKFTFRGEEKSALPDTPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|118444397|ref|YP_877171.1| negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
gi|118134853|gb|ABK61897.1| Negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
Length = 813
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/734 (57%), Positives = 562/734 (76%), Gaps = 13/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ L+ EAR GHNYI EH+LL L+++ +G+A +L +LG + + Q
Sbjct: 82 LTPRTKRLLELSLLEARDKGHNYITPEHMLLALIKKEDGLAYTILNDLGVNFEKLEAQ-- 139
Query: 155 RMVGESTEAVGAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+ + G V G S+ + PTL+++G +LTK+AEEGKLDPV+GR + ERV++
Sbjct: 140 -LENDPNLKQGKQVSGESNERVSHNTPTLDKHGRDLTKMAEEGKLDPVIGRGAETERVLE 198
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RR KNNPCLIG+PGVGKTAIAEGLAQ+I G++P+ ++ K+VI LD+ +VAG+KYR
Sbjct: 199 ILCRRIKNNPCLIGDPGVGKTAIAEGLAQKIVQGNIPEILKNKRVIALDISSMVAGSKYR 258
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK+M+EI + +ILFIDE+HT++GAG AEGAIDA+NILKP+LARGE+QCIGA
Sbjct: 259 GEFEERVKKIMDEIYKDKNVILFIDEIHTIVGAGGAEGAIDASNILKPALARGEIQCIGA 318
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT+DEYRK+IEKD ALERRFQPV V EP+ +E+I+ILKGLR++YE HH ++ TD+A+V+A
Sbjct: 319 TTIDEYRKYIEKDSALERRFQPVNVGEPTKEESIEILKGLRDKYEAHHGVKITDDAIVAA 378
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YI+DRFLPDKAIDLIDEAG++VR+++ P +++E EL ++ KEK +AV Q
Sbjct: 379 VELSDRYITDRFLPDKAIDLIDEAGAKVRIKNLTAPPSLKDMEAELEKVVKEKEDAVIVQ 438
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
DFEKA LRD+E +LK Q+ D K+ S TE +V+E I +VS W+ +PV
Sbjct: 439 DFEKAASLRDKEKNLKQQLKDFTDNWKKQSHMVTE------IVSEDQIAEVVSTWSNVPV 492
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
EK++ E+DRLLK+EETLHKRVIGQ+EAVK+I+RA+RRARVGLK+ RPI SFIF GPTG
Sbjct: 493 EKLTEKEADRLLKLEETLHKRVIGQNEAVKSIARAVRRARVGLKDSKRPIGSFIFLGPTG 552
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA FG E MIR+DMSE+ME+H VS+L+GSPPGYVG+ EGGQLTE VRR
Sbjct: 553 VGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGSPPGYVGHDEGGQLTEQVRR 612
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY+V+LFDEIEKAHP+VFN++LQILEDGRLTDSKG+TVDFKNT++I+TSNVG+S I K
Sbjct: 613 HPYSVILFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVDFKNTIIILTSNVGASRINKQ 672
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF DE + Y ++K V EELK FRPEFLNR+D++IVF L + +KEI +
Sbjct: 673 N-TLGFSRSEDEAEDEYEKMKDNVMEELKNSFRPEFLNRIDDIIVFHSLDEENLKEIVKL 731
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
ML EV +RLK KDI + + + +V++G + +YGARPLRR I R++ED ++E++L
Sbjct: 732 MLDEVSNRLKDKDIYIDFDDETEKLLVKKGIDVTYGARPLRRTITRIIEDKLSEEILKGV 791
Query: 812 IKEGDSVIVDVDSD 825
IK+GD V V+++
Sbjct: 792 IKKGDKVYTTVENN 805
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F RFTE+A ++ A++ A+ H YIG+EH+LLGLL+E +G++ +L ++ + N++
Sbjct: 2 IFGRFTERAQNILYYAKQAAQEFRHGYIGTEHILLGLLKEDKGMSKNLLNDMNVNEENVK 61
Query: 151 TQV 153
+
Sbjct: 62 NLI 64
>gi|403525254|ref|YP_006660141.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter sp.
Rue61a]
gi|403227681|gb|AFR27103.1| putative ATP-dependent Clp protease ATP-binding subunit
[Arthrobacter sp. Rue61a]
Length = 809
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/740 (58%), Positives = 570/740 (77%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMV----GESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++ G+ T G+G G G +G+ + L+++G NLT+ A E KLDPV+GR+ ++E
Sbjct: 119 QLLSGYQGKETAGSGSGQGQPEGTPAGSVV--LDQFGRNLTQAARENKLDPVIGREQEME 176
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG
Sbjct: 177 RVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAG 236
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 237 SRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQ 296
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD A
Sbjct: 297 TIGATTLDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGA 356
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
L SAAQL+ +YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + + EK A
Sbjct: 357 LASAAQLAERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIADVKMEKESA 416
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFE A LRD+E L A+ + KE + D+ V ++ I +++ T
Sbjct: 417 IDAQDFEGAASLRDKEQKLIAERAE-----KERNWKSGGMDDISEVDEDL-IAEVLANST 470
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLLKME+ LHKRV+GQ+EA+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 471 GIPVFKLTEEESSRLLKMEDELHKRVVGQNEAIKALSQAIRRTRAGLKDPKRPGGSFIFA 530
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE
Sbjct: 531 GPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTE 590
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 591 KVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 650
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ E
Sbjct: 651 ISK-SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIE 708
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ + + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK+
Sbjct: 709 IVDLFVTRLERRLKDKDMGIELTPAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKI 768
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+ GD V+VDVD +G+
Sbjct: 769 LFGELHSGDIVVVDVDGEGD 788
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQQA 52
>gi|159037791|ref|YP_001537044.1| ATPase [Salinispora arenicola CNS-205]
gi|157916626|gb|ABV98053.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 836
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/761 (57%), Positives = 583/761 (76%), Gaps = 20/761 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKEPAAAGTAPGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGL+QRI G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLSQRIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+
Sbjct: 379 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A +LRD E L Q K + E +AGD+ VVTEVD I ++ WT
Sbjct: 439 QDFERAAQLRDTEKQLLGQ--------KAQREKEWKAGDLD-VVTEVDDEQIAEVLGNWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+
Sbjct: 610 KVRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF D+ DS+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL E+
Sbjct: 670 VAK-AVSLGFQAS-DDSDSNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHQEILS 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DIM+ + +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++
Sbjct: 728 IVDIMIGRIETQLRNKDMGLELTDNAKKYLATKGFDPVLGARPLRRTIQRDIEDNLSERI 787
Query: 808 LAREIKEGDSVIVDVDSD-GNVTVLNGSSGAPESLADPLPV 847
L E+ G ++VD D D N+ + + A P P+
Sbjct: 788 LFNELTPGQIIVVDCDGDPTNIDTSTLTFHGTDKPATPGPI 828
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|374988711|ref|YP_004964206.1| putative ATP-dependent Clp protease [Streptomyces bingchenggensis
BCW-1]
gi|297159363|gb|ADI09075.1| putative ATP-dependent Clp protease [Streptomyces bingchenggensis
BCW-1]
Length = 841
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/758 (57%), Positives = 574/758 (75%), Gaps = 16/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+Q+
Sbjct: 140 QLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FE A LRD+E L A K + E +AGD+ VV EVD I +++ TGI
Sbjct: 440 FEMAAGLRDKEKQLLA--------AKAKREKEWKAGDM-DVVAEVDEELIAEVLATATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+AMI LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +I
Sbjct: 671 K-GFNLGFAAQGDVK-TGYERMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSEEDIIQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ +V +RLK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 729 DLMIAKVDERLKDRDMGIELSGDSKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
E++ G V+VD + +G +L D P+
Sbjct: 789 GELRSGHIVVVDTEGEGEEKKFTFRGEEKSALPDTPPI 826
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|119961353|ref|YP_945989.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
aurescens TC1]
gi|119948212|gb|ABM07123.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Arthrobacter aurescens TC1]
Length = 830
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/740 (58%), Positives = 570/740 (77%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++ G+ T G+G G G +G+ + L+++G NLT+ A E KLDPV+GR+ ++E
Sbjct: 140 QLLSGYQGKETAGSGSGQGQPEGTPAGSVV--LDQFGRNLTQAARENKLDPVIGREQEME 197
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG
Sbjct: 198 RVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAG 257
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 258 SRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQ 317
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD A
Sbjct: 318 TIGATTLDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGA 377
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
L SAAQL+ +YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + + EK A
Sbjct: 378 LASAAQLAERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIADVKMEKESA 437
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFE A LRD+E L A+ + KE + D+ V ++ I +++ T
Sbjct: 438 IDAQDFEGAASLRDKEQKLIAERAE-----KERNWKSGGMDDISEVDEDL-IAEVLANST 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLLKME+ LHKRV+GQ+EA+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESSRLLKMEDELHKRVVGQNEAIKALSQAIRRTRAGLKDPKRPGGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE
Sbjct: 552 GPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 612 KVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ E
Sbjct: 672 ISK-SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIE 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ + + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK+
Sbjct: 730 IVDLFVTRLERRLKDKDMGIELTPAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+ GD V+VDVD +G+
Sbjct: 790 LFGELHSGDIVVVDVDGEGD 809
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEIIGQGQQA 73
>gi|311743343|ref|ZP_07717150.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Aeromicrobium
marinum DSM 15272]
gi|311313411|gb|EFQ83321.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Aeromicrobium
marinum DSM 15272]
Length = 837
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/762 (57%), Positives = 573/762 (75%), Gaps = 19/762 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
++V + EA AG ++ L+++G NLT+ A EGKLDPV+GR+ QIERV+Q+
Sbjct: 140 QLVQGFQGKEAEAAGAPADNAPATSAVLDQFGRNLTQAAREGKLDPVIGRENQIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKT + EGLAQ I GDVP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTTVVEGLAQDIVRGDVPETLKDKQIYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDE+RKH EKD ALERRFQP++VPEPSV TI++LKGLR+RYE HH++ TDEALV+AA
Sbjct: 320 TLDEFRKHFEKDAALERRFQPIQVPEPSVAHTIEMLKGLRDRYEAHHRVTITDEALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +Y+SDRFLPDKAIDL+DEAGSR+R+R P + +E ++++ + + K A+ QD
Sbjct: 380 TLADRYVSDRFLPDKAIDLVDEAGSRLRIRRMTAPPDLKEFDEKISDVRRRKEGAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG--DVGPVVTEVDIQHIVSAWTGIP 510
FE A +RD E L A K + + +AG DV VV E I +++ TGIP
Sbjct: 440 FEAAASMRDEEKKLIA--------AKNERERQWKAGDMDVVAVVDEELIAEVLALATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
+ K+S +ES RLL ME L KRVIGQ EA+KA+SRAIRR R GLK+P RP SFIF+GP+
Sbjct: 492 IVKLSEEESSRLLNMEAELGKRVIGQHEAIKALSRAIRRTRAGLKDPKRPGGSFIFAGPS 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ L+K LA + FG ++A+I+LDMSE+ E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTWLSKTLANFLFGDDDALIQLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR +DFKNT++IMT+N+G+ I K
Sbjct: 612 RKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRVIDFKNTVIIMTTNLGTRDIAK 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G +GF D + SY+++K+ V+EELKQ+FRPEFLNR+DE++VF LT+ E+ + D
Sbjct: 672 -GVNLGFSQVGDVQ-GSYDKMKAKVSEELKQHFRPEFLNRVDEIVVFPPLTQDEIMAMVD 729
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+M+ + RLK KD+ +++T +E + + G++P GARPLRR + R +ED+MAEKML
Sbjct: 730 MMISSLETRLKDKDMGIELTTAAKELLSKRGFDPVLGARPLRRTVQREIEDAMAEKMLFG 789
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESL-----ADPLPV 847
E++ G V+VDV+ +G V A L DPL V
Sbjct: 790 ELRPGQIVLVDVEGEGVSAVFTFEGTAKADLELTEGTDPLAV 831
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 AQVEDIIGQGQQA 73
>gi|269836528|ref|YP_003318756.1| ATPase AAA-2 domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785791|gb|ACZ37934.1| ATPase AAA-2 domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 817
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/734 (58%), Positives = 566/734 (77%), Gaps = 16/734 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI LA +EARRL H+YIG+EHLLLGL+RE EG+AA VLE+LG + +R QV+
Sbjct: 83 LTPRAKKVIELAVDEARRLNHHYIGTEHLLLGLVREREGIAAGVLESLGVNLEKVRQQVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++V +S+ G + K P ++ G +LT+ A +GKLDPV+GRQ +IERV+QIL
Sbjct: 143 QVVSQSS-----GYQQKAQATKTPYMDALGFDLTEAARQGKLDPVIGRQAEIERVMQILS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQRI SGDVP+ ++ K+++ LD+G LVAGTKYRGEF
Sbjct: 198 RRTKNNPALIGEPGVGKTAIVEGLAQRIVSGDVPEPLQNKRLVALDIGALVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK++ E+K++ ILFIDE+HTL+GAGAAEGA+DAANILKP+L+RGELQ IGATTL
Sbjct: 258 EERLKKIVSEVKETG-AILFIDELHTLVGAGAAEGAVDAANILKPALSRGELQTIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IE+D ALERRFQPV+V EP+V+ETI+IL+G+RERYE HHKL+ TDEAL SAA L
Sbjct: 317 DEYRKYIERDAALERRFQPVQVEEPTVEETIEILRGIRERYEEHHKLKITDEALRSAAVL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ +Y+ DRFLPDKAIDL+DEA SRVR+ + P +E ++ L + +E + AV GQ+FE
Sbjct: 377 ASRYVPDRFLPDKAIDLVDEAASRVRMYRSASPPSLKEAKRGLESLRRELDAAVSGQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A +LRDRE L+ +I+ L EM E + D P VTE DI +VS WTGIP+ ++
Sbjct: 437 LAADLRDRERKLQGRIADL-----EMHWKEEQEND-EPQVTEEDIAQVVSMWTGIPLMRL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+T+E++RLL MEE LH+R++GQ+EA+ +++A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 ATEETERLLHMEEALHERIVGQEEAISTMAKAVRRARAGLKDPRRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ LA+ALA + FGSE+A+I++DMSEFMERH VS+L+G+PPGY+GY EGGQLTEAVRR+ Y
Sbjct: 551 TLLARALAEFMFGSEDALIKIDMSEFMERHNVSRLVGAPPGYIGYEEGGQLTEAVRRKSY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+ FNM+LQILEDG LTD+KGR VDF+NT++IMTSN+G+ +I++ G
Sbjct: 611 SVILLDEIEKAHPEAFNMLLQILEDGNLTDAKGRRVDFRNTIIIMTSNIGAEMIQREG-T 669
Query: 695 IGFDLDYDEKD---SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF + + ++ Y +K V +LKQ FRPEFLNR+D +IVF LT ++ +I ++
Sbjct: 670 LGFAVASNPEERFQQEYQAMKDKVLGQLKQTFRPEFLNRIDGVIVFHPLTPEQIHQIVEL 729
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
LK + +L+ KDI+L+VTE + E GY+ +GARPLRR I L+ED +AE +L
Sbjct: 730 ELKRLRTQLQEKDIKLEVTEAAMRLLGERGYDRQFGARPLRRIIQNLIEDPLAEGLLENR 789
Query: 812 IKEGDSVIVDVDSD 825
EG +V+VDV D
Sbjct: 790 FPEGSTVVVDVRDD 803
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++FTE+A KV+ LAQEEA R HNYIG+EHLLLGL+REG+GVAARVL N+G +R+
Sbjct: 5 FDKFTERARKVLTLAQEEAHRFNHNYIGTEHLLLGLVREGDGVAARVLSNMGVQLPKVRS 64
Query: 152 QVIRMVGESTEAVGAGVG 169
V ++G + +G
Sbjct: 65 AVEFIIGRGDSMIVGEIG 82
>gi|159040200|ref|YP_001539453.1| ATPase [Salinispora arenicola CNS-205]
gi|157919035|gb|ABW00463.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 844
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/737 (58%), Positives = 574/737 (77%), Gaps = 17/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ + E AG G + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKEPAAAGTAPGEAAPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGL+QRI G+VP+T++ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLSQRIVKGEVPETLKDKQLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFE+A +LRD E L Q K + E +AGD+ VVTEVD I ++ WTG
Sbjct: 440 DFERAAQLRDTEKQLLGQ--------KAQREKEWKAGDLD-VVTEVDDEQIAEVLGNWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ +
Sbjct: 611 VRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDV 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF D+ DS+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL E+ I
Sbjct: 671 AK-AVSLGFQAS-DDSDSNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHQEILSI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
DIM+ + +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++L
Sbjct: 729 VDIMIGRIETQLRNKDMGLELTDNAKKYLATKGFDPVLGARPLRRTIQRDIEDNLSERIL 788
Query: 809 AREIKEGDSVIVDVDSD 825
E+ G ++VD D D
Sbjct: 789 FNELTPGQIIVVDCDGD 805
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|256397471|ref|YP_003119035.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256363697|gb|ACU77194.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 850
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/753 (57%), Positives = 569/753 (75%), Gaps = 25/753 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + G P+ L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYSGGGKEAAAAGGPAEGTPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEIRTRGDIVLFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 320 ATTLDEYRKYVEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDSALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE + ++ + KEK A+
Sbjct: 380 AATLAERYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDDKIANVRKEKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L+ K + E + GD+ VV EVD I +++ T
Sbjct: 440 QDFEKAAALRDQEKQLQG--------AKARREKEWKQGDLD-VVAEVDEELIAEVLATAT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++A+K +S+AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETSRLLRMEDELHKRVIGQNQAIKGLSQAIRRTRAGLKDPKRPGGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G +GF D K + Y R+K+ V +ELKQ+FRPEFLNR+D+ +VF QL++ ++
Sbjct: 671 ISK-GFGLGFAASGDTK-APYERMKAKVNDELKQHFRPEFLNRVDDTVVFPQLSQDDIVA 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ +V RLK KD+ + +T + +E + GY+P GARPLRRAI R +ED ++EK+
Sbjct: 729 IVDLMMSKVDGRLKDKDMGIVLTRKAKELIASLGYDPVLGARPLRRAIQRHIEDPLSEKI 788
Query: 808 LAREIKEGDSVIVD-------VDSDGNVTVLNG 833
L EI+ G + VD V+SD T G
Sbjct: 789 LFGEIRSGQLITVDENTETGAVESDQRFTFKAG 821
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|409388485|ref|ZP_11240462.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rubripertincta NBRC 101908]
gi|403201559|dbj|GAB83696.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rubripertincta NBRC 101908]
Length = 848
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/738 (58%), Positives = 567/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSETGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 SDISK-AVGMGFS-SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMLTRVESALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L ++ G V+VDV+
Sbjct: 789 KILFGDVAPGQIVLVDVE 806
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|299821023|ref|ZP_07052911.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
gi|299816688|gb|EFI83924.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
Length = 821
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/731 (58%), Positives = 567/731 (77%), Gaps = 12/731 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T +A KVI L+ +EAR+LGH Y+G+EH+LLGL+REGEGVAARVL NLG + R QV
Sbjct: 79 QYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGVSLNKARQQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++++G S A G ++ PTL+ +LT +A E LDPV+GR +I+RV+++L
Sbjct: 139 LQLLGSSD---AASAGRQTNTQATPTLDSLARDLTVIAREENLDPVIGRAKEIQRVIEVL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ+I +VP+T+ GK+V+TLDMG +VAGTKYRGE
Sbjct: 196 SRRTKNNPVLIGEPGVGKTAIAEGLAQQIVKNEVPETLRGKRVMTLDMGTVVAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M+EI+Q+ +ILFIDE+HTLIGAG AEGAIDA+NILKP LARGELQCIGATT
Sbjct: 256 FEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQPVKV EP+VDE+IQIL GLR+RYE HH++ TD AL +A +
Sbjct: 316 LDEYRKYIEKDAALERRFQPVKVDEPTVDESIQILHGLRDRYEAHHRVAITDSALEAAVR 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDRFLPDKAID+IDEAGS+VRL+ P +++E+EL ++ KEK+ AV+GQ+F
Sbjct: 376 LSDRYISDRFLPDKAIDVIDEAGSKVRLKAYTTPSNVKQMEEELAELKKEKDAAVQGQEF 435
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E LK ++ S + + G VTE + +V++WTGIPV K
Sbjct: 436 EKAASLRDKEQKLKKELEK------TKSTWQQKQGMDHNEVTEDIVAEVVASWTGIPVMK 489
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E+D+LL ME+ LH+RVIGQ+ AVKA+S A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 490 LAETETDKLLNMEKLLHQRVIGQESAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVG 549
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG EEAMIR+DMSE+ME+ + ++L+GSPPGYVGY EGGQLTE VR++P
Sbjct: 550 KTELARALAESMFGDEEAMIRIDMSEYMEKFSTARLVGSPPGYVGYEEGGQLTEKVRQKP 609
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+L DEIEKAHPDVFNM+LQ+L+DGRLTDSKGR VDF+NT++IMTSNVG+ +++ +
Sbjct: 610 YSVILLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNVGAREMQQ-DK 668
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF + KD + ++ V +ELKQ FRPEF+NR+DE IVF L E+KEI ++
Sbjct: 669 SVGFLVTDPRKD--HKAMEQRVLQELKQVFRPEFINRIDETIVFHALQDKELKEIVTLLT 726
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K++ RL +DI + +TE + ++ ++GY+P YGARPL+RAI R +ED ++E++L +I
Sbjct: 727 KQLTKRLAAQDIHVTLTEGAKAKIAKDGYDPEYGARPLKRAIQRNIEDRLSEELLRGKIV 786
Query: 814 EGDSVIVDVDS 824
GD+V + V +
Sbjct: 787 VGDAVEIGVKA 797
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A KV+ L+QEEA RL H+ +G+EH+LLGL+REGEG+AA+ L L ++
Sbjct: 2 MFGRFTQRAQKVLALSQEEAIRLKHSNLGTEHILLGLVREGEGIAAKALYELEVSSEKVQ 61
Query: 151 TQVIRMVGESTEAV 164
+V ++GE + V
Sbjct: 62 QEVEALIGEGDKTV 75
>gi|359426609|ref|ZP_09217692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amarae NBRC 15530]
gi|358238174|dbj|GAB07274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amarae NBRC 15530]
Length = 845
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/739 (58%), Positives = 573/739 (77%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAASEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAEARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKTLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF + D K S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISK-AVGLGFSKNDDSK-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMIARVETQLKNKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V+VDV++
Sbjct: 789 KILFGELTAGQIVLVDVEN 807
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|378549452|ref|ZP_09824668.1| hypothetical protein CCH26_05167 [Citricoccus sp. CH26A]
Length = 845
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/761 (56%), Positives = 572/761 (75%), Gaps = 25/761 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQTVI 139
Query: 155 RMV------GESTEAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQP 204
+++ E GAGV G P L+++G NLT A EGKLDPV+GR
Sbjct: 140 QLLSGYQGGAGGKETAGAGVSSGGQSEGAPAGSVVLDQFGRNLTAAAREGKLDPVIGRAQ 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T+ K++ TLD+G L
Sbjct: 200 EMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLTDKQLYTLDLGSL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EP+V+ET +IL+GLR+RYE HH++ T
Sbjct: 320 ELQTIGATTLDEYRKHIEKDAALERRFQPIQVNEPTVEETTEILRGLRDRYEAHHRVSIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
++AL +AA L+ +Y+SDRFLPDKAIDLIDEAG+R+R++ P E +E + + ++ EK
Sbjct: 380 EDALKAAASLADRYVSDRFLPDKAIDLIDEAGARLRIKRMTTPPEIKEYDSRIAEVRAEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQH 501
A+ GQDFE A LRD+E L + + K +E TE + EV+ I
Sbjct: 440 EAAIDGQDFEGAAHLRDQEQKLTDERNR---KEEEWRTGVTEG------IAEVNEDLIAE 490
Query: 502 IVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPI 561
++SA TGIPV K++ +E+DRL ME +H+RVIGQDEA+K++S+AIRR R GLK+PNRP
Sbjct: 491 VLSASTGIPVFKLTEEETDRLRNMEAEIHQRVIGQDEAIKSLSQAIRRTRAGLKDPNRPS 550
Query: 562 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 621
SFIF+GPTGVGK+ELAKALA + FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY E
Sbjct: 551 GSFIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYEE 610
Query: 622 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 681
GGQLTE VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+
Sbjct: 611 GGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTT 670
Query: 682 NVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLT 741
N+G+ I K G GF D + + Y+R+K V EEL+Q+FRPEFLNR+D++IVF QL+
Sbjct: 671 NLGTKDISK-GVMTGFQSAADTQ-TGYDRMKGKVQEELRQHFRPEFLNRVDDVIVFPQLS 728
Query: 742 KLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 801
K E+ +I D+ + + RL +D+ + +T+ +E + + GY+P++GARPLRR I L+ED
Sbjct: 729 KDEIVQIVDLFVARLQKRLDDQDLTITITKPAKEFLADRGYDPAFGARPLRRTIQHLVED 788
Query: 802 SMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA-PESL 841
++EK+L EI G S+ VD++ +G L S+ + PE++
Sbjct: 789 QLSEKILFGEITPGSSITVDLEGEGEAAKLTFSTTSRPEAI 829
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 56/72 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L H+YIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHSYIGTEHILLGLIHEGEGVAAKALESLSISLGAVR 60
Query: 151 TQVIRMVGESTE 162
QV ++G+ +
Sbjct: 61 EQVQEIIGQGQQ 72
>gi|334335989|ref|YP_004541141.1| ATPase AAA-2 domain-containing protein [Isoptericola variabilis
225]
gi|334106357|gb|AEG43247.1| ATPase AAA-2 domain protein [Isoptericola variabilis 225]
Length = 855
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/739 (58%), Positives = 577/739 (78%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL +GAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLTKMGADLNKVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G G SG+ + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPVATGGPQEGQPSGSAV--LDQFGRNLTQAAREGKLDPVIGRTTEIERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP++V EPS++ I+ILKGLR+RYE HH++ TD ALVS
Sbjct: 318 ATTLDEYRKYVEKDPALERRFQPIQVAEPSLEHAIEILKGLRDRYEAHHRVSITDSALVS 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P E + L++E+ + +EK A+
Sbjct: 378 AATLADRYINDRYLPDKAIDLIDEAGARLRIRRMTAPPELKVLDEEIAEARREKESAIDE 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L + + DK K + ++ V EVD I +++ T
Sbjct: 438 QDFEKAAGLRDKEKQLTQKRA---DKEKAWKSGDLDS------VAEVDEELIAEVLAMST 488
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ LHKRV+GQ++A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 489 GIPVVKLTEEESSRLLHMEDELHKRVVGQEQAIKALSQAIRRTRAGLKDPKRPGGSFIFA 548
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 549 GPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTE 608
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDE+EKAH D+FN +LQ+LEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 609 KVRRRPFSVVLFDEVEKAHADIFNTLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 668
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G + GF+ D +SY R+K+ V EELKQ+FRPEFLNR+D+++VF QL++ E+ +
Sbjct: 669 IAK-GVQTGFNAGGDLV-TSYERMKAKVNEELKQHFRPEFLNRVDDVVVFPQLSQDEIIQ 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ + ++ RL+ KD+ +++T + + E+GY+P GARPL+RAI R +ED+++EK+
Sbjct: 727 IVDLEIAKLDRRLRDKDMGIELTPAAKHLLAEKGYDPVLGARPLKRAIQREIEDALSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDG 826
L E+K G+ VI+D + +G
Sbjct: 787 LFGELKAGEVVIIDGEGEG 805
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDGVR 60
Query: 151 TQVIRMVGESTEA 163
TQV ++GE +A
Sbjct: 61 TQVTEIIGEGQQA 73
>gi|441512961|ref|ZP_20994794.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amicalis NBRC 100051]
gi|441452336|dbj|GAC52755.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amicalis NBRC 100051]
Length = 848
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/738 (58%), Positives = 567/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 SDISK-AVGMGFS-SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMLTRVEAALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L +I G V+VDV+
Sbjct: 789 KILFGDIAPGQIVLVDVE 806
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|403251978|ref|ZP_10918293.1| ATPase with chaperone activity, ATP-binding subunit
[actinobacterium SCGC AAA027-L06]
gi|402914723|gb|EJX35731.1| ATPase with chaperone activity, ATP-binding subunit
[actinobacterium SCGC AAA027-L06]
Length = 737
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/737 (57%), Positives = 564/737 (76%), Gaps = 16/737 (2%)
Query: 112 RLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG--ESTEAVGAGVG 169
+LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI+++ + EAV AG
Sbjct: 2 QLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYQGKEAVAAGGP 61
Query: 170 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 229
+ L+++G NLT+ A EGKLDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGV
Sbjct: 62 AEGQPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGV 121
Query: 230 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 289
GKTA+ EGLAQ I GD+P+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI+
Sbjct: 122 GKTAVVEGLAQAIVKGDIPETLKDKQLYSLDLGALVAGSRYRGDFEERLKKVLKEIRTRG 181
Query: 290 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 349
+IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGATTLDEYRKH+EKD ALER
Sbjct: 182 DIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALER 241
Query: 350 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 409
RFQP++V EP+V TI+ILKGLR+RYE HHK+ +D ALVSAA L+ +Y+SDR LPDKAI
Sbjct: 242 RFQPIQVAEPTVAHTIEILKGLRDRYESHHKVSISDGALVSAATLADRYVSDRHLPDKAI 301
Query: 410 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 469
DLIDEAGSR+R+R +P E RE + ++ KEK A+ GQDFEKA LRD+E +L A+
Sbjct: 302 DLIDEAGSRLRIRRMTVPPEIREYDDKIAAARKEKESAIDGQDFEKAASLRDKEKNLIAE 361
Query: 470 ISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKME 526
K + +AGD+ VV EVD I ++S TGIPV K++ E+ RLLKME
Sbjct: 362 --------KAEREKNWKAGDL-DVVAEVDEELIAEVLSTATGIPVFKLTEAETARLLKME 412
Query: 527 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF 586
+ LH+RVIGQD+A+KA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL++ LA + F
Sbjct: 413 DELHRRVIGQDQAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSRTLAQFLF 472
Query: 587 GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH 646
G +A+I+LDMSE+ E+HT S+L G+PPGYVGY EGGQLTE VRRRP++VVLFDEIEKAH
Sbjct: 473 GDSDALIQLDMSEYSEKHTASRLFGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDEIEKAH 532
Query: 647 PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS 706
PD+FN +LQ+LEDGRLTD++GR VDFKNT++IMT+N+G+ I K +GF + +
Sbjct: 533 PDIFNSLLQVLEDGRLTDAQGRVVDFKNTIIIMTTNLGTRDISK-SLSLGF-ANVADAQG 590
Query: 707 SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 766
SY R+K+ V +ELK +FRPEFLNR+D+++VF QLT+ E+ +I D+M+ ++ +RLK KD+
Sbjct: 591 SYERMKAKVGDELKSHFRPEFLNRIDDIVVFHQLTENEIIKIVDLMVAQLDERLKAKDMG 650
Query: 767 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 826
+++T + + + GY+P GARPLRR I R LED ++EKML E+K G+ ++VDV +
Sbjct: 651 IELTTAAKSLLAKRGYDPVLGARPLRRTIQRELEDVLSEKMLFGELKAGEIILVDVSDET 710
Query: 827 NVTVLNGSSGAPESLAD 843
+ A ++ D
Sbjct: 711 DSATFTFKGAAKSAMPD 727
>gi|343925825|ref|ZP_08765340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
alkanivorans NBRC 16433]
gi|343764176|dbj|GAA12266.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
alkanivorans NBRC 16433]
Length = 848
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/738 (58%), Positives = 567/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ +V EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRSGDM-DIVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 SDISK-AVGMGFS-SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMLTRVESALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L +I G V+VDV+
Sbjct: 789 KILFGDIAPGQIVLVDVE 806
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|86743058|ref|YP_483458.1| ATPase [Frankia sp. CcI3]
gi|86569920|gb|ABD13729.1| ATPase AAA-2 [Frankia sp. CcI3]
Length = 834
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/762 (58%), Positives = 581/762 (76%), Gaps = 23/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G+ + L+++G NLT A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKGETATSGAPAEGTPSTSL-VLDQFGRNLTAAARESKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIIKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+
Sbjct: 379 AASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIAAVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWT 507
QDFEKA LRD+E L L +K K + E +AGD+ VV EV +I +++ WT
Sbjct: 439 QDFEKAASLRDKEKTL------LSEKAKR--EKEWKAGDMD-VVAEVGDEEIAEVLAIWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETARLLRMEDELHKRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+
Sbjct: 610 RVRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I KG IGF D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +
Sbjct: 670 ISKGP-GIGFATGQGAVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSEAEIIQ 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ML V +LK KD+ L++T + + ++GY+P GARPLRR I R +ED ++EK+
Sbjct: 727 IVDLMLARVDAQLKNKDMALELTSAAKALLAKKGYDPVLGARPLRRTIQREIEDVLSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLPV 847
L +K G+ V+ DV+ DG+ V G + P + D PV
Sbjct: 787 LYGTLKPGEIVVGDVEGDGDEAKFVFRGEA-KPNQVPDAPPV 827
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|359766456|ref|ZP_09270267.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
polyisoprenivorans NBRC 16320]
gi|378719673|ref|YP_005284562.1| putative ATP-dependent Clp protease, ATP-binding subunit ClpC
[Gordonia polyisoprenivorans VH2]
gi|359316093|dbj|GAB23100.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
polyisoprenivorans NBRC 16320]
gi|375754376|gb|AFA75196.1| putative ATP-dependent Clp protease, ATP-binding subunit ClpC
[Gordonia polyisoprenivorans VH2]
Length = 847
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/739 (58%), Positives = 571/739 (77%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAAGLRDKEKQLVAE--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
+ I K +GF D K S+Y R+K V +ELK++FRPEFLNR+D++IVF QLTK E+
Sbjct: 671 ADISK-AVGLGFSKGDDSK-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTKDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+ +++T+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMINRVETQLKNKDMAIELTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V+VDVD+
Sbjct: 789 KILFNELTPGQIVLVDVDN 807
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|404257466|ref|ZP_10960792.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
namibiensis NBRC 108229]
gi|403404139|dbj|GAB99201.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
namibiensis NBRC 108229]
Length = 827
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/738 (58%), Positives = 568/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 650 SDISK-AVGMGFS-SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEI 707
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 708 IQMVDLMLTRVESALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 767
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L ++ G V+VDV+
Sbjct: 768 KILFGDVAPGQIVLVDVE 785
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQQA 52
>gi|403721633|ref|ZP_10944535.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rhizosphera NBRC 16068]
gi|403207043|dbj|GAB88866.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rhizosphera NBRC 16068]
Length = 848
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/738 (58%), Positives = 570/738 (77%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG S+ + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSTESGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L ++ D+ K+ +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAARLRDKEKQL---VNERADREKQW-----RSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISK-AVGLGF-TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQQEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LK KD+ L++TE+ + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IEMVDLMIGRVEAQLKNKDMALELTEKAKNLLARRGFDPVLGARPLRRTIQREVEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L EI G V+VDV+
Sbjct: 789 KILFNEIHAGQIVLVDVE 806
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|427416269|ref|ZP_18906452.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425758982|gb|EKU99834.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/739 (58%), Positives = 567/739 (76%), Gaps = 12/739 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+FT + +V+ + +EA++LG N + +EHLLL +L + +G A RVL LG D + +R +
Sbjct: 79 QFTPRCRQVLAQSLKEAQQLGKNAVDAEHLLLAMLWDEDGSAMRVLSKLGVDCNKLRADL 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+ + + A K P L G NLT+LA G+LDPV+GR +IER++QIL
Sbjct: 139 VEAI---SGAKPIPTDKQPKLVKTPILNRCGVNLTELATLGRLDPVIGRHEEIERMIQIL 195
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTA+AEGLAQRI D+P++ ++V+TL++G L+AGTKYRGE
Sbjct: 196 SRRTKNNPILIGEPGVGKTALAEGLAQRIIDRDLPESFHNRQVMTLNVGSLLAGTKYRGE 255
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLK +M E++ + +IL IDEVHTLIGAG+ EG++DAANILKP+LARGELQCIGATT
Sbjct: 256 FEERLKTIMVELRSAGNVILVIDEVHTLIGAGSPEGSLDAANILKPALARGELQCIGATT 315
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYR+H E+D AL RRFQPV + EPS+DE + IL+GLR YE HH L +D AL +A +
Sbjct: 316 LDEYRQHFERDAALARRFQPVMIGEPSIDEAVLILQGLRSCYERHHHLTISDLALEAAVK 375
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHA-QLPEEARELEKELRQITKEKNEAVRGQD 452
S +YISDRFLPDKAIDLIDEAGSRV + A Q +++L K L+QI+K+K++A++ Q+
Sbjct: 376 FSNRYISDRFLPDKAIDLIDEAGSRVHILSAKQQSFTSKDLSKALQQISKKKDDAIQKQE 435
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
F +A L+ +E++L +I +V +E DI ++VS+WTGIPV
Sbjct: 436 FAQASALQGQEIELMKKIDPVVQDASVSRSGSVV--------SEADIAYVVSSWTGIPVS 487
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ ESD+LL MEE LH+R+IGQ EAVKAI+RA RRAR GL+NPNRPIASFIF+GPTGV
Sbjct: 488 KLTESESDQLLHMEEILHRRLIGQTEAVKAIARATRRARAGLQNPNRPIASFIFAGPTGV 547
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+EL KALA +FG+E AM+RLDMSE+MERHT++KLIGSPPGYVG+ EGG+LTEAVRR+
Sbjct: 548 GKTELVKALAISFFGAEAAMVRLDMSEYMERHTIAKLIGSPPGYVGHGEGGKLTEAVRRK 607
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PYTV+L DEIEKAHPDV N++LQIL++G LTD+KGRTV+FKNTLL+MTSNVG+ +I+KG
Sbjct: 608 PYTVILLDEIEKAHPDVSNLLLQILDEGHLTDAKGRTVNFKNTLLVMTSNVGAKLIQKGV 667
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF++ ++ DS Y + +LV EELK++FRPEFLNRLDE+IVFRQLTK EVK+IADI+
Sbjct: 668 GGLGFNVADNQTDSHYRNLVTLVNEELKEFFRPEFLNRLDEVIVFRQLTKDEVKQIADIL 727
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
L + RL + I L VT+RF++ ++E GY+P GARPLRRAI RLLEDS+AE +L+R++
Sbjct: 728 LCDFQRRLTEQMITLTVTDRFKDYLIESGYSPEQGARPLRRAITRLLEDSLAEAILSRQV 787
Query: 813 KEGDSVIVDVDSDGNVTVL 831
+ GD+VI+D+D + +V +L
Sbjct: 788 QAGDAVIIDIDDNNDVQIL 806
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+ F E+AI+V++ AQEEA RL H ++G++HLLLGL+ +AA L++LG + +
Sbjct: 1 MFDFFVERAIRVVINAQEEAHRLNHPFMGTDHLLLGLMAAEPNIAADTLKSLGMTLTAAQ 60
Query: 151 TQVIRMVGESTEAVGAGV 168
V M+G+ + V +
Sbjct: 61 IAVEDMIGKGSTRVSKDI 78
>gi|403066584|ref|YP_006639073.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Saccharina japonica]
gi|378787497|gb|AFC40127.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Saccharina japonica]
Length = 894
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/774 (57%), Positives = 579/774 (74%), Gaps = 35/774 (4%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
G+ GFV A+ FT +A KV+ ++ ++++ L H+YI +EH+ L LL + +G+ ++VL+
Sbjct: 68 GKGTGFV--AIEIPFTPRAKKVLEMSIKQSKELNHSYINTEHIFLALLNDTDGICSKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEA----VGAGVGGGSSGNK---------------MPTLE 181
NLGA+ I++ V+ + ++ E+ V A VG G P L
Sbjct: 126 NLGANIPRIKSYVLNELDKNHESGSSKVLANVGSGDQNQTKDLFLFDDLDRASLTAPNLL 185
Query: 182 EYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQR 241
EY T+LT+ AE KLDPVVGRQ +IERV+QIL RR KNNP LIGEPGVGKTA+AEGLAQR
Sbjct: 186 EYTTDLTEAAERAKLDPVVGRQNEIERVIQILSRRRKNNPILIGEPGVGKTAVAEGLAQR 245
Query: 242 IASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL 301
I +VP + KV LD+ LL+AGTKYRGEFEERLK++++E+K+ II+ IDEVHTL
Sbjct: 246 IVQREVPSEMHDHKVFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKNIIIVIDEVHTL 305
Query: 302 IGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSV 361
+GAGAAEGA+DAANILKP+LARGELQCIGATT+DEYR+HIEKDPALERRFQPV V EPS+
Sbjct: 306 VGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALERRFQPVWVNEPSI 365
Query: 362 DETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL 421
+ETI ILKGLR RYE HH+L T+EAL +AA L QYI+DRFLPDKAIDLIDE +RVRL
Sbjct: 366 EETITILKGLRLRYEQHHRLEITNEALTAAANLGAQYIADRFLPDKAIDLIDEGSARVRL 425
Query: 422 RHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEM- 480
+ +LPE L+KELR I K+ AVR Q FE A E+RD E++L+AQ+ A++ K +
Sbjct: 426 VNYRLPEAVHILDKELRTILDNKDLAVREQRFETATEIRDDELNLRAQMGAIIKAQKRIV 485
Query: 481 SKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAV 540
K E VG DI IV+ WTG+PV K++ DE+ RLL++E LH+RVIGQ EAV
Sbjct: 486 PKGVLERLKVGA----QDIASIVALWTGVPVTKITKDENTRLLELENVLHQRVIGQKEAV 541
Query: 541 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 600
A++RA+RRARVG++N RPIASF FSGPTGVGK+EL K LA+++FG+E++M+RLDMSEF
Sbjct: 542 SAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDSMVRLDMSEF 601
Query: 601 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 660
MERHTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTVVLFDE+EKAHPDVFN++LQILEDG
Sbjct: 602 MERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQILEDG 661
Query: 661 RLTDSKGRTVDFKNTLLIMTSNVGSSVI---EKGGRRIGFDLDY-DEKDSSYNRIKSLVT 716
RLTDSKGR +DFKNT+LIMTSN+GS I E + IGF + D K + Y ++ + V
Sbjct: 662 RLTDSKGRVIDFKNTILIMTSNLGSKAIQNNELASQGIGFGGETGDTKKTKYAQLCNTVG 721
Query: 717 EELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT-KDIELQVTERFRE 775
E LK +F+PEFLNR+DE+IVF QLTK +K+IA IM+K++ +R+K K+I L +T R E
Sbjct: 722 ESLKAFFKPEFLNRIDEIIVFEQLTKNNIKQIAVIMVKDLIERVKKEKEISLSLTPRMME 781
Query: 776 RVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML----AREIKEGDSVIVDVDSD 825
++EEG+NP+YGARPLRRA+++L+ED ++ + L + + ++VDVD D
Sbjct: 782 LLIEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKKDHDDDDPVDILVDVDFD 835
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+A++VIM++QEE+RRLGHN++G+E +LLGLL EG GV + G +R
Sbjct: 1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTTNAVREYGITIRKVR 60
Query: 151 TQVIRMVGEST 161
+V R++G+ T
Sbjct: 61 IEVERLIGKGT 71
>gi|297563907|ref|YP_003682880.1| ATPase AAA-2 domain-containing protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848356|gb|ADH70374.1| ATPase AAA-2 domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 836
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/755 (56%), Positives = 579/755 (76%), Gaps = 17/755 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + E G S+ + L+++G NLT+ A E KLDPV+GR +IERV+Q+
Sbjct: 140 QLLHGYQGKEPQATGASSESTPSTSLVLDQFGRNLTQAARESKLDPVIGRDKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ+I G++P+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVKGEIPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK++EKD ALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKYLEKDAALERRFQPIQVDEPTIKHAIEILKGLRDRYEAHHRVSITDSALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
QL+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+ QD
Sbjct: 380 QLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD E L + K + E +AGD+ VV EVD I +++A TGI
Sbjct: 440 FEKAASLRDDEKQLLGK--------KAQREKEWKAGDMD-VVAEVDEELIAEVLAASTGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLL+ME+ LH+RVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEESSRLLRMEDELHRRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+EL+K LA + FG E+A+I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELSKTLAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDEIEKAH D+FN +LQ+LE+GRLTD++GR VDFKNT++IMT+N+G+ I
Sbjct: 611 RRKPFSVVLFDEIEKAHNDIFNSLLQVLEEGRLTDAQGRNVDFKNTVIIMTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G+ +GF + D+ ++Y R+K+ V+EELK FRPEFLNR+D++IVF QLT+ E+ +I
Sbjct: 671 K-GQAMGFAKE-DDAQTNYERMKAKVSEELKTNFRPEFLNRVDDIIVFHQLTEKEIFQIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ + RLK +D+ +++ + ++ + E G++P GARPLRR I R +ED ++EK+L
Sbjct: 729 DLMITSLDSRLKERDMGIELRPKAKQILSERGFDPVLGARPLRRTIQREIEDQLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
++K G V++D + +G G P+ A P
Sbjct: 789 GDLKAGQIVVIDAEGEGTDAKFT-FKGVPKPAAVP 822
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|312194050|ref|YP_004014111.1| ATPase AAA-2 domain-containing protein [Frankia sp. EuI1c]
gi|311225386|gb|ADP78241.1| ATPase AAA-2 domain protein [Frankia sp. EuI1c]
Length = 836
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/763 (58%), Positives = 581/763 (76%), Gaps = 23/763 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G + A G S G +L +++G NLT A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKGDPATAGAPSEGTPSTSLVLDQFGRNLTAAAREAKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+ Q
Sbjct: 380 ASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTG 508
DFEKA LRD+E +L + DK K + E +AGD+ VV EV +I +++ WTG
Sbjct: 440 DFEKAASLRDKEKNL------IADKAKR--EKEWKAGDMD-VVAEVGDEEIAEVLAIWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LH+RVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEETARLLRMEDELHRRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTER 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
KG IGF D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +I
Sbjct: 671 SKGP-GIGFATGQGAVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSQDEIIQI 727
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML V +LK KD+ L++T ++ + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 728 VDLMLARVDAQLKNKDMALELTPAAKQLLAVRGYDPVLGARPLRRTIQREIEDVLSEKIL 787
Query: 809 AREIKEGDSVIVDVDSDGNVT----VLNGSSGAPESLADPLPV 847
+K G+ VI DV+ D V G + P S+ D P+
Sbjct: 788 YGTLKPGEIVIGDVEGDPTAEDAKFVFRGET-KPSSVPDTPPI 829
>gi|358457648|ref|ZP_09167865.1| ATPase AAA-2 domain protein [Frankia sp. CN3]
gi|357079193|gb|EHI88635.1| ATPase AAA-2 domain protein [Frankia sp. CN3]
Length = 836
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/763 (58%), Positives = 580/763 (76%), Gaps = 23/763 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G + A GG S G +L +++G NLT A E KLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKGEPATAGGPSEGTPSTSLVLDQFGRNLTAAAREAKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+ Q
Sbjct: 380 ASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWTG 508
DFEKA LRD+E L A+ K + E +AGD+ VV EV +I +++ WTG
Sbjct: 440 DFEKAASLRDKEKTLLAE--------KAKREKEWKAGDMD-VVAEVGDEEIAEVLAIWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LH+RVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEETARLLRMEDELHRRVIGQEQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+K LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTER 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+ I
Sbjct: 611 VRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
KG IGF D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL+K E+ +I
Sbjct: 671 SKGP-GIGFATGQGAVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSKDEIIQI 727
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML V +LK KD+ L++T + + GY+P GARPLRR I R +ED ++EK+L
Sbjct: 728 VDLMLARVDTQLKNKDMALELTPAAKTLLAIRGYDPVLGARPLRRTIQREIEDVLSEKIL 787
Query: 809 AREIKEGDSVIVDVDSDGNVT----VLNGSSGAPESLADPLPV 847
+K G+ VI DV+ D V G + P S+ D P+
Sbjct: 788 YGTLKPGEIVIGDVEGDPESEDAKFVFRGET-KPSSVPDTPPI 829
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|404213401|ref|YP_006667576.1| ATPases with chaperone activity, ATP-binding subunit [Gordonia sp.
KTR9]
gi|403644200|gb|AFR47440.1| ATPases with chaperone activity, ATP-binding subunit [Gordonia sp.
KTR9]
Length = 846
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/739 (58%), Positives = 569/739 (76%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAASEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D S+Y+R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 SDISK-AVGMGFS-SSDGTKSNYDRMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTREEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMLTRVEGALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L +I G V+VDV++
Sbjct: 789 KILFGDIAPGQIVLVDVEN 807
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|390559270|ref|ZP_10243621.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
gi|390174147|emb|CCF82914.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
Length = 817
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/749 (57%), Positives = 569/749 (75%), Gaps = 17/749 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI LA +EARRL H+YIG+EHLLLGL+REGEG+AA VLE+LG + +R QV+
Sbjct: 83 LTPRAKKVIELAVDEARRLNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRQQVM 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++V +S+ G + K P ++ G +LT+ A + KLDPV+GRQ +IERV+QIL
Sbjct: 143 QVVSQSS-----GYQTQKAQTKTPYMDALGFDLTEAARQAKLDPVIGRQTEIERVMQILS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQRI +GDVP+ ++ K++++LD+G LVAGTKYRGEF
Sbjct: 198 RRTKNNPALIGEPGVGKTAIVEGLAQRIVAGDVPEPLQNKRLVSLDIGALVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK++ E+K + I LFIDE+HTL+GAGAAEGA+DAANILKP+L+RGE+Q IGATTL
Sbjct: 258 EERLKKIVGEVKDTASI-LFIDELHTLVGAGAAEGAVDAANILKPALSRGEVQTIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IE+D ALERRFQPVKV EP++DETIQIL+G+RERYE HHKL+ TDEALV+AA L
Sbjct: 317 DEYRKYIERDAALERRFQPVKVEEPTIDETIQILRGIRERYEEHHKLKITDEALVAAATL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+Y++DRFLPDKAIDLIDEA SRVR+ + P +E + L + E + AV GQ+FE
Sbjct: 377 GARYVTDRFLPDKAIDLIDEASSRVRMYRSASPPSLKEAMRGLESLRHELDSAVGGQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A +LRDRE L+ +IS L +E E G P VTE DI +VS WTGIP+ ++
Sbjct: 437 LAADLRDRERKLQHRISDLEANWRE------EQGSTEPEVTEEDIAQVVSMWTGIPLMRL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
T+ES+RLL MEE LH+R+IGQDEA++ +S+A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 ETEESERLLHMEEALHERIIGQDEAIETLSKAVRRARAGLKDPRRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ LA+ALA + FGSE+++I++DMSEFMERHTVS+L+G+PPGY+GY EGGQLTEAV R+ Y
Sbjct: 551 TLLARALAEFIFGSEDSLIKIDMSEFMERHTVSRLVGAPPGYIGYEEGGQLTEAVHRKSY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DE+EKAHP+ FNM+LQILEDG LTD+KGR VDF+NT+L+MTSNVG+ +I++ G
Sbjct: 611 SVILLDEVEKAHPEAFNMLLQILEDGTLTDAKGRRVDFRNTILVMTSNVGAELIQREG-T 669
Query: 695 IGFDLDYDEKD---SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF + + Y +K V +LKQ FRPEFLNR+D +IVF L + +++ I ++
Sbjct: 670 LGFAAAANAEKKVMQEYQFMKDKVLGQLKQTFRPEFLNRIDGVIVFHPLNREQIRRIVNL 729
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
LK + +L ++I L+++E + + E GY+ YGARPLRR I L+ED +AE +L
Sbjct: 730 ELKRIRLQLAEQEINLEISEPAMDLLGERGYDRQYGARPLRRIIQNLIEDPLAEGLLQGR 789
Query: 812 IKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
K G +V+VD + DG +++ + AP S
Sbjct: 790 FKPGTTVLVD-ERDGLLSLESVKQLAPVS 817
>gi|380302202|ref|ZP_09851895.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium squillarum M-6-3]
Length = 863
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/760 (56%), Positives = 576/760 (75%), Gaps = 24/760 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGLLREGEG A +VL L A+P+ +R +VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLLREGEGTAVKVLSRLKAEPAAVRQEVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+ G+ G G SG+ + L+++G NLT+ A +G LDPV+GR+ + ERV+
Sbjct: 140 ERLSGYQGKEPATAGGPAEGQPSGSLV--LDQFGRNLTQAARDGNLDPVIGREHEAERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGK+A+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKSAVVEGLAQSIVAGDVPETLKDKQLYTLDLGSLVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRKHIEKD ALERRFQP++V EPS+ T++ILKGLR+RYE HHK+ TD ALVS
Sbjct: 318 ATTLEEYRKHIEKDAALERRFQPIQVDEPSIVHTVEILKGLRDRYEAHHKVTITDAALVS 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P E +E + + K+K EA+ G
Sbjct: 378 AANLADRYINDRFLPDKAIDLIDEAGARLRIRRLTAPPELKEFDTRIEDTRKQKEEAIDG 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
QDFE A LRD E LK + +K K ++ DV V+E I +++A TGIP
Sbjct: 438 QDFELAASLRDTEQQLKTERD---EKEKAWRHGDS---DVVSTVSEEVIAEVLAAATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
+ K++ +ES RLL ME+ LHKRVIGQDEA+KA+S+AIRR R GLK+P RP SFIF+GPT
Sbjct: 492 IVKLTEEESSRLLHMEDELHKRVIGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPT 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELAKALA + FG E+++I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTELAKALAEFLFGDEDSLIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GRTVDFKNT++IMT+N+G+ I K
Sbjct: 612 RKPFSVVLFDEVEKAHVDIFNSLLQILEDGRLTDSQGRTVDFKNTVIIMTTNLGTRDIAK 671
Query: 691 G---GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
G G + G DL D Y R+K+ V EELKQ+F+PEFLNR+D+++VF QL++ E+ +
Sbjct: 672 GVSMGFQAGGDLATD-----YERMKAKVNEELKQHFKPEFLNRVDDIVVFPQLSQSEIIQ 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ RL KD+ + +T+ + + E+GY+P GARPLRR I R +ED+++EK+
Sbjct: 727 IVDLMVAKLETRLSEKDMAITLTDGAKALLAEKGYDPVLGARPLRRTIQRDIEDTLSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLN----GSSGAPESLAD 843
L +++ GD ++V + +G + L G +G E+++D
Sbjct: 787 LFGQVRVGDEIVVGAEGEGLLGELTFARRGENGELEAISD 826
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EH+LLGL+ E EGV A+ LE LG +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARLLNHNYIGTEHILLGLIHENEGVGAKALEALGVTLDAVR 60
Query: 151 TQVIRMVGESTE 162
QV ++GE +
Sbjct: 61 EQVRDIIGEGNQ 72
>gi|262200860|ref|YP_003272068.1| ATPase AAA [Gordonia bronchialis DSM 43247]
gi|262084207|gb|ACY20175.1| ATPase AAA-2 domain protein [Gordonia bronchialis DSM 43247]
Length = 848
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/738 (58%), Positives = 570/738 (77%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISK-AVGLGF-TKGDDSQSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTRDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+ L++T+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMINRVETQLKNKDMALELTDRAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L EI G V+VDV+
Sbjct: 789 KILFNEIGAGQIVLVDVE 806
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284062481|gb|ADB73419.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 841
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/759 (56%), Positives = 575/759 (75%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A + KLDPV+GR +IERV+Q+
Sbjct: 140 QLLSGYQGKEPAAAGGPAEGTPSTSLVLDQFGRNLTQAARDSKLDPVIGRAKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVGEPTLTHTIEILKGLRDRYEAHHRISITDGALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAG+R+R++ P + RE + + I +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGARMRIKRMTAPPDLREFDDRIAAIRREKESAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L ++ K + + +AGD+ VV EVD I +++ WTGI
Sbjct: 440 FEKAASLRDKEKTLLSE--------KAEREKQWKAGDMD-VVAEVDDEQIAEVLANWTGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +E+ RLL+ME+ LHKR+IGQ+EA+K++S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEETTRLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+ELAKALA + FG ++A+I++DM EF +R TVS+L+G+PPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELAKALAQFLFGEDDALIQIDMGEFHDRFTVSRLVGAPPGYVGYDEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDEIEKAH DVFN +LQ+LEDGRLTD +GR VDFKNT+LI+T+N+G+ I
Sbjct: 611 RRKPFSVVLFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K +GF + D + S+Y R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ E+ EI
Sbjct: 671 K-AVGLGFQVGNDSQ-SNYERMKNKVNEELKQHFRPEFLNRIDDIVVFHQLTEDEIIEIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ V +L KD+ L++T ++ + G++P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMVARVEGQLANKDMSLEITPAAKKLLAHRGFDPVLGARPLRRTIQREIEDALSEKILY 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGA-PESLADPLPV 847
E+ G ++VDV+ +G A P L D PV
Sbjct: 789 GELTAGQIIVVDVEGEGTDAKFTFRGEAKPIDLPDTPPV 827
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|452990568|emb|CCQ98240.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium ultunense Esp]
Length = 812
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/731 (56%), Positives = 571/731 (78%), Gaps = 9/731 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + ++ L+ EAR LGHNY+G+EH+LLGLL E EGVA +L+ LG D +R ++
Sbjct: 81 FTPRTKRIFELSFLEARNLGHNYVGTEHILLGLLEESEGVAVAILKKLGVDTLKLRDDIL 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
M+ + T + G + P L++YG +LTKL+ +GK+DPV+GR +IERV+QIL
Sbjct: 141 SMLSDGTAKSASSSEGRQ--DSTPNLDKYGRDLTKLSIDGKIDPVIGRAKEIERVIQILS 198
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAIAEGLAQ+I G VP+ I+ K+V+TLD+ ++AG KYRGEF
Sbjct: 199 RRTKNNPVLIGEPGVGKTAIAEGLAQKIVEGQVPEIIKDKRVVTLDLPGMLAGAKYRGEF 258
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLK +M+E+K++ IILFIDE+HT+IGAGAAEGAIDA+NILKP LARGELQ IGATT+
Sbjct: 259 EERLKSVMKELKEAGNIILFIDELHTIIGAGAAEGAIDASNILKPVLARGELQVIGATTI 318
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIEKD ALERRFQP+ V EP+V++TI+IL+GLR+RYE HH+++ +DEAL +AA+L
Sbjct: 319 DEYRKHIEKDSALERRFQPIMVEEPTVEDTIKILEGLRDRYEAHHRVKISDEALKAAAEL 378
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAIDLIDEA S +R+ P+ ++LE++L ++++EK EA+ Q+FE
Sbjct: 379 SSRYITDRFLPDKAIDLIDEAASMIRINSYVAPDGLKDLEEKLEELSQEKEEAINTQNFE 438
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA ++RD E +++ ++ KE ++ E E VV +I H+VS WTG+PV ++
Sbjct: 439 KAAKIRDMEKNIREELQ------KEKNRWEKEKQTSDMVVGYDEIAHVVSNWTGVPVSRM 492
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+T+ES RLL +E+TLH++VIGQ++AV+A+S A+RRARVGLK+P +P+ +FIF GPTGVGK
Sbjct: 493 TTEESQRLLNLEDTLHEKVIGQNQAVEAVSNAVRRARVGLKDPKKPVGTFIFVGPTGVGK 552
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ LAKALA FG EE+MIR+DMSE+ME+H+VS+L+GSPPGYVGY EGGQLTEAVRR+PY
Sbjct: 553 TYLAKALAETLFGDEESMIRIDMSEYMEKHSVSRLVGSPPGYVGYDEGGQLTEAVRRKPY 612
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQIL+DGRLTDSKGRTVDFKNT++IMTSNVG++ I K
Sbjct: 613 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTVIIMTSNVGATSIRKQN-V 671
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF +E+ Y ++K + +EL++ FRPEFLNR+DE+IVF L + +VKEI IM+K
Sbjct: 672 LGFSPASEEEKEEYEKMKENIMDELRRTFRPEFLNRIDEVIVFHSLKEEDVKEIVGIMIK 731
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ ++K +I ++VT+R + + +G++P YGARPL R I +++ED +AE++L ++ +
Sbjct: 732 DLEKKMKKLNINIKVTDRTIDYISRKGFDPVYGARPLERTITKMIEDQLAEEILKGKVSK 791
Query: 815 GDSVIVDVDSD 825
D++ +D D
Sbjct: 792 DDNISIDFKDD 802
>gi|389862461|ref|YP_006364701.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
gi|388484664|emb|CCH86202.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
Length = 847
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/762 (56%), Positives = 572/762 (75%), Gaps = 21/762 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A +GKLDPV+GR +IERV+Q+
Sbjct: 140 QLLSGYQGKEPAAAGGPAEGTPSTSLVLDQFGRNLTQAARDGKLDPVIGRAKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAAVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVSEPTLAHTIEILKGLRDRYEAHHRISITDNALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAG+R+R++ P + RE + + I +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGARMRIKRMTAPPDLREFDDRISGIRREKESAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD+E L + K + + +AGD+ VV EVD I +++ WTGI
Sbjct: 440 FEKAASLRDKEKQLLGE--------KSEREKQWKAGDMD-VVAEVDDEQIAEVLANWTGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +E+ RLL+ME+ LHKR+IGQ+EA+K++S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEETTRLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+ELAKALA + FG ++A+I++DM EF ++ TVS+L+G+PPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELAKALAQFLFGEDDALIQIDMGEFHDKFTVSRLVGAPPGYVGYDEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDEIEKAH DVFN +LQ+LEDGRLTD +GR VDFKNT+LI+T+N+G+ I
Sbjct: 611 RRKPFSVVLFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K +GF D S+Y R+K V EELKQ+FRPEFLNR+D+++VF QLT+ E+ I
Sbjct: 671 K-AVGLGFQSGNDTT-SNYERMKQKVNEELKQHFRPEFLNRIDDIVVFHQLTEDEIVHIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ML V +L KD+ L+VT ++ + G++P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMLNRVETQLSNKDMSLEVTPAAKKLLAARGFDPVLGARPLRRTIQREIEDTLSEKILY 788
Query: 810 REIKEGDSVIVDVDSDGNVT----VLNGSSGAPESLADPLPV 847
EI G ++VDV+ + + T G + P L D PV
Sbjct: 789 GEIASGQIIVVDVEENADPTQSTFTFRGEA-KPVDLPDTPPV 829
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|420164359|ref|ZP_14671089.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM095]
gi|394231748|gb|EJD77371.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM095]
Length = 773
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/704 (58%), Positives = 548/704 (77%), Gaps = 11/704 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+T +A KVI L+ +EAR+L HN++G+EH+LLGL+RE EGVAARV NL + + R QV
Sbjct: 79 HYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQV 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ +G S E S N PTL+ +LT +A++G LDPVVGR +I RV+++L
Sbjct: 139 VKALG-SPEMSNKNAQANKSNN-TPTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVL 196
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAIAEGLAQ I +VP+T++ K+V++LDMG +VAGTKYRGE
Sbjct: 197 SRRTKNNPVLIGEPGVGKTAIAEGLAQAIVKNEVPETLKDKRVMSLDMGTVVAGTKYRGE 256
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK+MEEI Q+ +ILFIDE+HTL+GAG AEGAIDA+NILKP+LARGELQCIGATT
Sbjct: 257 FEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATT 316
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+
Sbjct: 317 LDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAK 376
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+F
Sbjct: 377 LSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEF 436
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
E A LRD++ L+ Q D E A+ G + ++E +I +++ WTGIP+ K
Sbjct: 437 ENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTK 490
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVG
Sbjct: 491 INETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 550
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+PPGYVG+ +GGQLTE VRR+P
Sbjct: 551 KTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 610
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDEIEKAHPDVFN++LQ+L+DG LTD+KGRTVDF+NT++IMTSNVG+ ++ R
Sbjct: 611 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQELQD-QR 669
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
GF + S Y ++ + +ELK FRPEFLNR+D++IVF +LTK E+KEI +M+
Sbjct: 670 FAGF--GGASEGSDYETVRKTMMKELKNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMV 727
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
++ RL ++I + VT++ +E++ EEGY+P YGARPL RAI +
Sbjct: 728 NKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQK 771
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F R TE+A +V+ AQEEA RL H+ IG+EHLLLGL++E EG+AA+VLE+ +
Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVI 61
Query: 151 TQVIRMVGESTEAVG 165
+V +++G E +G
Sbjct: 62 EEVEKLIGHGQEQMG 76
>gi|377569546|ref|ZP_09798707.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
terrae NBRC 100016]
gi|377533283|dbj|GAB43872.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
terrae NBRC 100016]
Length = 846
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/739 (58%), Positives = 568/739 (76%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAASEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 SDISK-AVGMGFS-SSDGTQSNYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTREEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ L+VT+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMLTRVEGALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L +I G V+VDV++
Sbjct: 789 KILFGDIAPGQIVLVDVEN 807
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|414153535|ref|ZP_11409858.1| Negative regulator of genetic competence ClpC/MecB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411454933|emb|CCO07762.1| Negative regulator of genetic competence ClpC/MecB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 814
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/734 (61%), Positives = 587/734 (79%), Gaps = 11/734 (1%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A +V+ LA EE+RRLGHNY+G+EHLLLGLLREGEGVAA+VL LGAD +R V
Sbjct: 81 TPRAKRVLELAVEESRRLGHNYVGTEHLLLGLLREGEGVAAQVLTGLGADLERVRQLVTN 140
Query: 156 MVGES----TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
M+G + A G G G + G K +L+++ +LT+LA E KLDPVVGR +IERV+Q
Sbjct: 141 MLGGTPGGHQSAGGHGQGCPAGGCKTVSLDQFSRDLTRLAGEDKLDPVVGRSKEIERVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTAIAEGLAQRI SG+VP+ + ++V+TLD+ +VAGTKYR
Sbjct: 201 VLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGNVPEILLNRRVVTLDLAGMVAGTKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFE+RLKK+MEEIKQ+ II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGA
Sbjct: 261 GEFEDRLKKIMEEIKQAGNIIVFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK+IEKDPALERRFQP++V EP+V+ET++ILKG+R++YE HHK+R TDEAL +A
Sbjct: 321 TTLDEYRKYIEKDPALERRFQPIQVDEPTVEETVEILKGIRDKYEAHHKVRITDEALTAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A+LS +YI+DRFLPDKAIDLIDEA SRVR++ +P + ++ EK L +I KEK A+ Q
Sbjct: 381 AKLSDRYITDRFLPDKAIDLIDEAASRVRIKALTMPPDLKDKEKLLEEIRKEKEAAINNQ 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+FEKA ELRDRE + A++ ++ KE + ++++GD VV+E DI HIV++WTG+PV
Sbjct: 441 EFEKAAELRDREHAILAEL----NQAKE-NWHQSKSGD-NLVVSEEDIAHIVASWTGVPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+K++ +ES+RLL +EE LH+RV+GQ+EAVKA++RA+RRAR GLK+P RP+ SFIF GPTG
Sbjct: 495 KKLAQEESERLLNLEEVLHRRVVGQNEAVKAVARAVRRARAGLKDPKRPVGSFIFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALA FG EEAM+R+DMSE+ME+H VS+L+G+PPGYVGY EGGQLTEAVRR
Sbjct: 555 VGKTELARALAEALFGDEEAMVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+VVL DEIEKAHPDVFN++LQ+LEDGRLTD++GR VDF+N ++IMTSNVG S ++
Sbjct: 615 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDTRGRLVDFRNAVIIMTSNVGVSGLKTV 674
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
G R+GF + DE + Y ++K E LK+ FRPEFLNR+DE+IVF LT+ +KEI +
Sbjct: 675 G-RVGFAPNTDEAKAEYEKMKERSEEALKRTFRPEFLNRIDEIIVFHSLTREHIKEIVSL 733
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
ML+EV +R+ ++ L TE ++++ GY+ YGARPLRR I R +ED ++E+++
Sbjct: 734 MLQEVAERMAEHEVFLTFTEAAKDKLAALGYSEEYGARPLRREIQRRVEDRLSEELIKGT 793
Query: 812 IKEGDSVIVDVDSD 825
+GD V+VDV ++
Sbjct: 794 FNKGDKVLVDVQNE 807
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+RFTE+A KV++LAQEEARRL + YIG+EH+LLGL+REGEG+AA+VL L +R
Sbjct: 1 MFQRFTERAQKVLVLAQEEARRLKYPYIGTEHILLGLIREGEGIAAKVLAQLNISADKVR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
T V +MV + V A +
Sbjct: 61 TAVEQMVETGNQTVPADI 78
>gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480236|gb|AEF38796.1| ATPase with chaperone activity, ATP-binding subunit
[Amycolicicoccus subflavus DQS3-9A1]
Length = 851
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/760 (56%), Positives = 580/760 (76%), Gaps = 18/760 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E AGVG G +G +L +++G NLT+ A EGKLDPV+GRQ +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGVGRGEAGTPSTSLVLDQFGRNLTQAAMEGKLDPVIGRQKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDGALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + + +EK A+
Sbjct: 380 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAEARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA +LRD+E L AQ + + + +GD+ VV +VD I ++S WT
Sbjct: 440 QDFEKAAKLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAQVDDEQIAEVLSNWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AV+A+++AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETSRLLRMEDELHKRIIGQEDAVRAVAKAIRRTRAGLKDPRRPSGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTAD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF E S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++ E
Sbjct: 671 ISK-AVGLGFTAGTSEA-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQEQIIE 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M V +LK KD+ L++TE+ + + + G++P GARPLRR + R +ED ++EK+
Sbjct: 729 MVDLMTNRVETQLKHKDMALELTEQAKSLLAKRGFDPVLGARPLRRTVQREIEDQLSEKI 788
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
L EI+ G ++VDV++ + + P+PV
Sbjct: 789 LFGEIEPGQIIVVDVENWDGTGAGENAKFTFQGTKKPVPV 828
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 NQVEEIIGQGQQA 73
>gi|441508083|ref|ZP_20990008.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
gi|441448010|dbj|GAC47969.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
Length = 848
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/738 (58%), Positives = 570/738 (77%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYETHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E LV++ E K + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKE-------KQLVNERAEREK-QWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISK-AVGLGF-TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+ +++T+R + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMIARVETQLKNKDMAIELTDRAKSLLARRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L E+ G V+VDV+
Sbjct: 789 KILFNELTAGQIVLVDVE 806
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|367467387|ref|ZP_09467329.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
gi|365817543|gb|EHN12499.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
Length = 866
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/742 (57%), Positives = 571/742 (76%), Gaps = 16/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA LGHNYIG+EH+LLGL+RE EGVAAR+L + AD IR +VI
Sbjct: 80 FTPRAKKVLELALREALSLGHNYIGTEHILLGLVRENEGVAARILLDFDADSEKIRNEVI 139
Query: 155 RMV---GESTEAVGAGVGGG-SSGNKMP------TLEEYGTNLTKLAEEGKLDPVVGRQP 204
RM+ G + G+ VGG +SG P L+++G +LTKLA EGKLDPVVGR+
Sbjct: 140 RMLSGPGGRRQTAGSSVGGAPASGEGTPQKRSSKVLDQFGRDLTKLAAEGKLDPVVGRET 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IER++QIL RRTKNNP LIGEPGVGKTA+ EGLAQRI+SGDVP+ + K++ TLD+ L
Sbjct: 200 EIERIMQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRISSGDVPELLRDKQIYTLDLAAL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG+KYRGEFEERLKK+M+EI ++ILFIDE+H L+GAGAAEGAIDAA+ILKP+LARG
Sbjct: 260 VAGSKYRGEFEERLKKVMKEIANKGDVILFIDEIHNLVGAGAAEGAIDAASILKPALARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT+DEYRK++E+D ALERRFQ V+V +PS +E +QIL+GLR+RYE HHK+ T
Sbjct: 320 ELQTIGATTIDEYRKYLERDSALERRFQQVRVEQPSTEEAVQILQGLRDRYEQHHKVEIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEALV+A +L+ +YI+DR LPDKAIDL+DEA SR R+R P +E+E+++ + ++K
Sbjct: 380 DEALVAAVELADRYIADRQLPDKAIDLVDEAASRKRIRSMGSPPVFQEVEEQIAEARRKK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+ A+ Q++E A LRD E L + LV++ E + E +G E +I IVS
Sbjct: 440 DAAIEAQEYEAAASLRDEERKLVGKKRELVEQW-EQGEGEQPRLSIG----EEEIADIVS 494
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
WTGIPV K++ E+ RL++MEE LH+RVIGQ++AV+ +S+AIRR+R GLK+P RP SF
Sbjct: 495 MWTGIPVFKLTEAETRRLMRMEEELHERVIGQEQAVQVVSKAIRRSRAGLKDPKRPTGSF 554
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF GPTGVGK+ELAK+LA + FG +AM+R+DMSE+ME+H VS+L+GSPPGYVGY EGGQ
Sbjct: 555 IFLGPTGVGKTELAKSLAHFLFGDADAMVRVDMSEYMEKHAVSRLVGSPPGYVGYDEGGQ 614
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTEAVRR+PY+V+L DEIEKAHPDVFN++LQILEDGRLTDS+GRTVDF++ ++IMTSN+G
Sbjct: 615 LTEAVRRKPYSVLLLDEIEKAHPDVFNLLLQILEDGRLTDSQGRTVDFRHAIVIMTSNIG 674
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+S I K +GF + +++ +Y +K VT ELK+ F+PEFLNR+DE+IVF +LTK E
Sbjct: 675 ASEIAK-STPLGFQVGDEDESLTYEDMKQRVTGELKKAFKPEFLNRIDEVIVFHKLTKPE 733
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+ML V LK +++ L++T+ ++ + E+G++P+ GARPLRRAI R +ED +A
Sbjct: 734 ITQIVDLMLDRVRVSLKDRELTLELTDGLKDLLAEKGWDPAMGARPLRRAIQRYIEDPLA 793
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
+ +LA +IK G +V +DV +G
Sbjct: 794 DFVLANQIKPGATVKIDVAPEG 815
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+A +V++LAQEEAR L HNYIG+EH+LLGLLRE EG+AARVLE+L +R
Sbjct: 1 MFERFTERARQVVVLAQEEARTLKHNYIGTEHILLGLLREEEGLAARVLESLDITVERVR 60
Query: 151 TQVIRMVGESTEAVGAG 167
QV+R+VG S E V +G
Sbjct: 61 AQVVRIVG-SGEEVTSG 76
>gi|312144275|ref|YP_003995721.1| ATPase AAA-2 domain-containing protein [Halanaerobium
hydrogeniformans]
gi|311904926|gb|ADQ15367.1| ATPase AAA-2 domain protein [Halanaerobium hydrogeniformans]
Length = 817
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/735 (60%), Positives = 560/735 (76%), Gaps = 12/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T ++ KV+ LA +EAR++GHNYIG+EHLLLGL+REGEGVA R+L +L +D NI+ +V+
Sbjct: 80 LTPRSKKVLNLAMDEARKMGHNYIGTEHLLLGLIREGEGVAVRILMDLNSDIKNIKEEVV 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G AV SS K L+EY +LT +A E KLDPV+GR +I RV+Q+L
Sbjct: 140 DLLG-GKNAVQKK--SKSSNRKTKNLDEYSRDLTDMARENKLDPVIGRDKEINRVIQVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQ I S +VPD + K+V++LD+ LVAG+KYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIIEGLAQMIVSENVPDLLLNKRVVSLDLSSLVAGSKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK +M EI +S EIILFIDE+HTL+GAGAAEGAIDAANILKP+LARGELQ +GATTL
Sbjct: 257 EQRLKAVMNEIIESGEIILFIDEMHTLVGAGAAEGAIDAANILKPALARGELQAVGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQ V V E SV+E I ILKGLR+ YE HHK+ TD A+ A L
Sbjct: 317 DEYRKYIEKDAALERRFQSVLVEENSVEEAIDILKGLRDPYEAHHKVEITDRAIEDAVVL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YISDRFLPDKAIDLIDEA S+VRL ++ P E +EL ++L + KEK AV+ Q+FE
Sbjct: 377 SHRYISDRFLPDKAIDLIDEAASKVRLSNSTRPPEFKELSRKLEEAEKEKEAAVKNQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD+E LK ++ L + E E G VVT DI IVS+WTGIPV K+
Sbjct: 437 KAARMRDKEKKLKKELEELKNSW------ENEKGKAEAVVTTEDIAEIVSSWTGIPVTKL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
E+ RLL++EE LHKRVIGQDEA+ A+S A+RRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 491 EEAETARLLRLEEELHKRVIGQDEAITAVSEAVRRARAGLKDPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELAK LA F E+AMIR+DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLTE VRRRPY
Sbjct: 551 TELAKTLAETMFNDEDAMIRVDMSEYMEKHSVSRLVGSPPGYVGHDEGGQLTEPVRRRPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQILEDG LTD+ GR VDFKNT++IMTSNVG+ IEK +
Sbjct: 611 SVVLFDEIEKAHPDVFNVLLQILEDGVLTDTHGRKVDFKNTIVIMTSNVGADFIEKQS-K 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + DE+ S+Y +K V +L++ FRPEFLNRLDE+IVF L K +K+IAD+ML
Sbjct: 670 LGFKTENDEQ-SNYESMKDNVITQLRKTFRPEFLNRLDEIIVFHALNKEHIKQIADLMLD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RL K++E+++TE ++++ E+GY+ +GARPLRR I R +E+ ++ K+L +EI E
Sbjct: 729 DLRERLNEKEMEIEITEAAKDKLAEDGYDSEFGARPLRRTIQRQIENELSIKILDKEIGE 788
Query: 815 GDSVIVDVDSDGNVT 829
+ +DV DG T
Sbjct: 789 NSKIKIDV-VDGEYT 802
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF +FTE+A KV+ +A++EA +L H+Y+G+EH+L GL+ EG+G+AAR L + G +
Sbjct: 1 MFAKFTERARKVLSIAEQEALKLKHSYVGTEHILYGLIAEGQGIAARALIDNGISRDIVE 60
Query: 151 TQVIRMVGESTEAVGAGVG 169
++ M+G+ V +G
Sbjct: 61 NKIEDMIGKGQNEVKGSIG 79
>gi|297181778|gb|ADI17958.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Chloroflexi bacterium HF0200_09I09]
Length = 836
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/753 (56%), Positives = 568/753 (75%), Gaps = 12/753 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A +VI LA +EARRL H+YIG+EHLLLGL+REGEG+AA VLE+LG + +R +
Sbjct: 83 LTPRAKRVIELAVDEARRLNHSYIGTEHLLLGLVREGEGIAAGVLESLGVNLERVRGETT 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
R++ ++ A G + PTL++ G +LT A +LDPV+GR+ +IERV+QIL
Sbjct: 143 RILAQTQPQSAAAGSGARQTARTPTLDQLGVDLTAAARSNELDPVIGRETEIERVIQILS 202
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKT+IAEGLA RI GD+PDT+ GK+++TLD+G LVAGTKYRGEF
Sbjct: 203 RRTKNNPVLIGEPGVGKTSIAEGLAHRIVQGDIPDTLLGKRMLTLDIGSLVAGTKYRGEF 262
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK++EEI+ + ILFIDE+H L+GAGAAEGA+DAANILKP+LARGELQ IGATTL
Sbjct: 263 EERLKKVIEEIRSAKNCILFIDELHMLVGAGAAEGAVDAANILKPALARGELQAIGATTL 322
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKHIE+D ALERRFQPV+V EPSV+ETI+ILKG+R YE HH L+ DEA+ +A++L
Sbjct: 323 DEYRKHIERDAALERRFQPVRVDEPSVEETIEILKGVRVAYEEHHNLKIGDEAIKAASEL 382
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +Y+SDRFLPDKAIDLIDEA +RVR+RH P R+ K L + +EK++A+ Q +E
Sbjct: 383 SSRYVSDRFLPDKAIDLIDEASARVRIRHQSTPPSLRDATKGLEALRREKDQAIGNQQYE 442
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A ELR+RE+ L++++ + +TE +V++ DI+ +VS WTGIP+ ++
Sbjct: 443 YAAELREREVRLQSKLEE------LEEEVQTERAGDDLIVSDEDIRDVVSMWTGIPLTRI 496
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+++E+ RLL+ME+ L RVIGQDEA+ +++A+RRAR GLKNP RPI +F+F GPTGVGK
Sbjct: 497 ASEETARLLEMEQYLDDRVIGQDEAIGVVAKAVRRARAGLKNPKRPIGAFMFLGPTGVGK 556
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ LA+ LA + FGS++ ++RLDMSEFME+HTVS+L+GSPPGYVGY +GGQLT+ VRRR Y
Sbjct: 557 TYLAETLAEFMFGSKDNIVRLDMSEFMEKHTVSRLVGSPPGYVGYDDGGQLTDLVRRRSY 616
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
++L DEIEKAHPDVFNM+LQI +DG L+D+KGR VDF+NT++IMTSNVGS +I K R
Sbjct: 617 CLILLDEIEKAHPDVFNMLLQIFDDGHLSDAKGRKVDFRNTIIIMTSNVGSDLIRKDT-R 675
Query: 695 IGFDLDYDEKDSS---YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
GFD D+ ++ Y R+K VTEE+K+ FRPEF+NR+D+ +VF L + +++I D+
Sbjct: 676 FGFDTATDDAKTAEQQYERMKDKVTEEMKRVFRPEFINRIDQSVVFHALQEDHIRQIVDL 735
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
LK+V L+ K+I L+VT+ + + EEG++P +GARPLRR I +ED +++ +L E
Sbjct: 736 ELKDVRQNLREKEITLEVTKTLLDHLGEEGFDPVFGARPLRRVIQNEVEDRLSDALLEGE 795
Query: 812 IKEGDSVIVDVDSDGNVTVLN-GSSGAPESLAD 843
EG ++ +D DG VT GS+ PE A+
Sbjct: 796 FVEGATIRLDY-VDGEVTAEQIGSAHPPEPPAE 827
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++FTE+A +V+ LAQEEA+R HNYIG+EHLLLGL+REG+GVAA+VL NLG + + +R+
Sbjct: 5 FDKFTERARRVLTLAQEEAQRFNHNYIGTEHLLLGLVREGDGVAAKVLSNLGVELNKVRS 64
Query: 152 QVIRMVGESTEAVGAGVG 169
V ++G + +G
Sbjct: 65 AVEFIIGRGDRSTSGEIG 82
>gi|376403710|ref|YP_005090071.1| clpC gene product (chloroplast) [Fucus vesiculosus]
gi|269991273|emb|CAX12451.1| ATP-dependent clp protease ATP-binding subunit [Fucus vesiculosus]
Length = 891
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/752 (58%), Positives = 570/752 (75%), Gaps = 30/752 (3%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
G+ GFV A+ FT +A K++ ++ ++++ L H+YI +EH+ L LL + +G+ A+VL+
Sbjct: 68 GKGTGFV--AIEIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDGICAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEA---VGAGVGGGSSGNK---------------MPTLEE 182
NLGA+ I+ V+ + ++ E+ V A VG G P L E
Sbjct: 126 NLGANIPRIKAYVLNELDQNHESGSKVLANVGAGDQTQTKDLFLFDDLDRASLAAPNLLE 185
Query: 183 YGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 242
Y T+LT+ AE KLDPVVGRQ +IERV+QIL RR KNNP LIGEPGVGKTA+AEGLAQRI
Sbjct: 186 YTTDLTEAAERAKLDPVVGRQNEIERVIQILSRRRKNNPILIGEPGVGKTAVAEGLAQRI 245
Query: 243 ASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLI 302
+VP + KV LD+ LL+AGTKYRGEFEERLK++++E+K+ I++ IDEVHTL+
Sbjct: 246 IQREVPSELHDYKVFVLDVTLLLAGTKYRGEFEERLKRIVQELKEQKNIVIVIDEVHTLV 305
Query: 303 GAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVD 362
GAGAAEGA+DAANILKP+LARGELQCIGATT+DEYR+HIEKDPALERRFQPV V EPS++
Sbjct: 306 GAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALERRFQPVWVNEPSIE 365
Query: 363 ETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLR 422
ETI ILKGLR RYE HH+L T+EAL++AA L QYI+DRFLPDKAIDLIDE +RVRL
Sbjct: 366 ETITILKGLRLRYEQHHRLEITNEALIAAANLGAQYIADRFLPDKAIDLIDEGSARVRLV 425
Query: 423 HAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEM-S 481
+ +LPE A L+KELR I +K+ AVR Q FEKA E+RD E++L+AQ+ A++ K M
Sbjct: 426 NYRLPEAAYILDKELRNILDDKDLAVREQRFEKATEIRDDELNLRAQMGAIIKAQKRMVP 485
Query: 482 KAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVK 541
K E VG DI IV+ WTG+PV K++ DE+ RLL++E LH RVIG EAV
Sbjct: 486 KGVLERLKVGA----QDIASIVALWTGVPVTKITKDENTRLLELENVLHTRVIGXKEAVS 541
Query: 542 AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFM 601
A++RA+RRARVG++N RPI+SF FSGPTGVGK+EL K LA+++FG+E++M+RLDMSEFM
Sbjct: 542 AVARAVRRARVGMRNMKRPISSFFFSGPTGVGKTELTKTLASFFFGAEDSMVRLDMSEFM 601
Query: 602 ERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGR 661
ERHTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTVVLFDE+EKAHPDVFN++LQILEDGR
Sbjct: 602 ERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQILEDGR 661
Query: 662 LTDSKGRTVDFKNTLLIMTSNVGSSVIEK---GGRRIGFDLD-YDEKDSSYNRIKSLVTE 717
LTDS+GR +DFKNT+LIMTSN+GS I+ + IGF + D K + Y ++ + V E
Sbjct: 662 LTDSQGRLIDFKNTILIMTSNLGSKAIQNNDANSQGIGFGGEASDTKKTKYAQLCNTVGE 721
Query: 718 ELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT-KDIELQVTERFRER 776
LK +F+PEFLNR+DE+IVF QLTK +KEIA IM+ ++ +R+K K+I L +T R E
Sbjct: 722 SLKAFFKPEFLNRIDEIIVFEQLTKNNIKEIAVIMINDLVERVKNEKNISLSLTPRMMEL 781
Query: 777 VVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
++EEG+NP+YGARPLRRAI++L+ED ++ + L
Sbjct: 782 LIEEGFNPTYGARPLRRAIVKLVEDKVSLEYL 813
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+A++VIM++QEE+RRLGHN++G+E +LLGLL EG GVA + G +R
Sbjct: 1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVAINAVREYGITIRKVR 60
Query: 151 TQVIRMVGEST 161
+V R++G+ T
Sbjct: 61 IEVERLIGKGT 71
>gi|288920479|ref|ZP_06414787.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f]
gi|288348131|gb|EFC82400.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f]
Length = 834
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/762 (58%), Positives = 580/762 (76%), Gaps = 23/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G+ + L+++G NLT A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKGDPATAGAPAEGTPSTSL-VLDQFGRNLTAAARESKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+
Sbjct: 379 AASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWT 507
QDFEKA LRD+E L A+ K + E +AGD+ VV EV +I +++ WT
Sbjct: 439 QDFEKAASLRDKEKTLLAE--------KAKREKEWKAGDMD-VVAEVGDEEIAEVLAIWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETARLLRMEDELHKRVIGQEQAIKAVSQAIRRTRAGLKDPKRPGGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+
Sbjct: 610 RVRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I KG IGF D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL+++E+ +
Sbjct: 670 ISKGP-GIGFATGQGAID--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSEVEIIQ 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ML V +LK KD+ L++T + + + GY+P GARPLRR I R +ED ++EK+
Sbjct: 727 IVDLMLARVDSQLKNKDMALELTPAAKVLLAKRGYDPVLGARPLRRTIQREIEDVLSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLPV 847
L ++ G+ V+ DV+ +G V G P S+ D P+
Sbjct: 787 LYGTLRPGEIVVGDVEGEGEEAKFVFRGEP-KPNSVPDAPPI 827
>gi|254386473|ref|ZP_05001776.1| clp-family ATP-binding protease [Streptomyces sp. Mg1]
gi|194345321|gb|EDX26287.1| clp-family ATP-binding protease [Streptomyces sp. Mg1]
Length = 841
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/728 (58%), Positives = 564/728 (77%), Gaps = 18/728 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G E+ AG + + L+++G NLT+ A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYSGGGKESATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV
Sbjct: 320 ATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQ 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+
Sbjct: 380 AATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIANVRRDKESAIDS 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD E L A K + E +AGD+ VV EVD I +++ T
Sbjct: 440 QDFEKAASLRDSEKQLLA--------AKAKREKEWKAGDMD-VVAEVDGELIAEVLATAT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LH+RVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEESSRLLRMEDELHRRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G +GF D K + Y+R+K+ V EELKQ+FRPEFLNR+D+ +VF QLT+ ++ +
Sbjct: 671 ISK-GFNLGFAAQGDTK-TGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQLTQEDIIQ 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ +V +RLK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+
Sbjct: 729 IVDLMIAKVDERLKDRDMGIELSGEAKQLLAKRGYDPIMGARPLRRTIQREIEDMLSEKI 788
Query: 808 LAREIKEG 815
L E++ G
Sbjct: 789 LFGELRPG 796
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|330470478|ref|YP_004408221.1| ATPase aaa-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328813449|gb|AEB47621.1| atpase aaa-2 domain protein [Verrucosispora maris AB-18-032]
Length = 846
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/739 (58%), Positives = 576/739 (77%), Gaps = 17/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ + E AG G + L+++G NLT+ A EGKLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKEPAAAGTAPGEAAPSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIKGEVPETLKDKQLYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+ Q
Sbjct: 380 ATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFE+A +LRD+E L Q K + E +AGD+ VV+EVD I ++ WTG
Sbjct: 440 DFERAAQLRDKEKQLLGQ--------KAQREKEWKAGDLD-VVSEVDDEQIAEVLGNWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+ +
Sbjct: 611 VRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRDV 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+ I
Sbjct: 671 AK-AVSLGFQASED-SESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQQEILSI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
DIM+ + +L+ KD+ L++T+ ++ + +G++P GARPLRR I R +ED+++E++L
Sbjct: 729 VDIMIARIETQLRNKDMGLELTDNAKKYLAAKGFDPVLGARPLRRTIQRDIEDNLSERIL 788
Query: 809 AREIKEGDSVIVDVDSDGN 827
E+ G V+VD + D N
Sbjct: 789 FNELIPGQIVVVDCEGDPN 807
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|284034301|ref|YP_003384232.1| ATPase AAA-2 domain-containing protein [Kribbella flavida DSM
17836]
gi|283813594|gb|ADB35433.1| ATPase AAA-2 domain protein [Kribbella flavida DSM 17836]
Length = 843
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/752 (57%), Positives = 575/752 (76%), Gaps = 24/752 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ T + GA G S + + L+++G N T+ A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKETASAGAPAEGAPSSSLV--LDQFGRNYTQSARESKLDPVIGRETEIERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTAI EGLAQ+I GDVP+T++ K++ +LD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAIVEGLAQQIVRGDVPETLKDKQIYSLDLGALVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 318 ATTLDEYRKYVEKDAALERRFQPIQVAEPSIAHTIEILKGLRDRYEAHHRVTITDAALVN 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AAQL+ +YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 378 AAQLADRYISDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIANVRREKESAIDA 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L I+A ++ K+ +AGD+ VV EVD I ++S T
Sbjct: 438 QDFERAASLRDDEKKL---INAKAEREKQW-----KAGDMD-VVAEVDEELIAEVLSTAT 488
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ L KR +GQ +AVKA+SR+IRR R GLK+P RP SFIF+
Sbjct: 489 GIPVFKLTEEESSRLLDMEKELAKRYVGQTDAVKALSRSIRRTRAGLKDPRRPSGSFIFA 548
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KAL + FG E A+I LDMSE+ E+HT S+L GSPPGYVGY EGGQLTE
Sbjct: 549 GPSGVGKTELSKALTEFLFGDESALISLDMSEYSEKHTASRLFGSPPGYVGYEEGGQLTE 608
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQIL++GRLTD++GR VDFKNT++IMT+N+G+
Sbjct: 609 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIIMTTNLGTRD 668
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF ++ SY ++K+ VTEELKQ+FRPEFLNR+DE++VF Q K E+ +
Sbjct: 669 IAK-AVSLGFS-QANDASGSYEKMKAKVTEELKQHFRPEFLNRVDEIVVFHQHGKDEIVK 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ +V +RLK KD+ +++T + V + G++P GARPLRRA+ R +ED +AEK+
Sbjct: 727 IVDLMIAQVEERLKDKDMGIELTPAAKALVADRGFDPVLGARPLRRALQRDVEDVLAEKI 786
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 839
L E++ G V+VD G V G G PE
Sbjct: 787 LFGELRPGQIVLVDAAPAGTV----GEDGLPE 814
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|385680704|ref|ZP_10054632.1| ATPase with chaperone activity, ATP-binding subunit [Amycolatopsis
sp. ATCC 39116]
Length = 850
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/756 (57%), Positives = 581/756 (76%), Gaps = 28/756 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GAG G G+ + + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTQSAREGKLDPVIGRGKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ ++ ++K A+
Sbjct: 379 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAKVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E +L AQ S + K+ GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKNLLAQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALAEFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE S Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ E
Sbjct: 670 ISK-TVSLGFSSGNDE-GSRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIE 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMVTRVEKQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLAD 843
L E++ G VIVDV+ G SG PE D
Sbjct: 788 LFGEVEAGQIVIVDVE---------GWSGNPEDRDD 814
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|392407856|ref|YP_006444464.1| chaperone ATPase [Anaerobaculum mobile DSM 13181]
gi|390620992|gb|AFM22139.1| ATPase with chaperone activity, ATP-binding subunit [Anaerobaculum
mobile DSM 13181]
Length = 829
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/735 (57%), Positives = 566/735 (77%), Gaps = 13/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ +A +V+ LA EAR +G NY+G+EH+LLGLL EGEG+AA+VL ++G D + +VI
Sbjct: 81 LSPRAKRVLDLAMREARNMGVNYVGTEHILLGLLAEGEGIAAQVLMSMGLDTQKVYQEVI 140
Query: 155 RMV--GESTE-AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
R + GE + + G+ S K PTL++ G +L ++A G+LDPV+GR+ +I+RV+Q
Sbjct: 141 RYLSGGEVDQMSQSPGLSKKKSHTKTPTLDQLGIDLVEMARRGELDPVIGREKEIQRVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNPCLIG+PGVGKTAI EGLAQ+IA G+VP+ ++ K+++ L++G LVAGTKYR
Sbjct: 201 ILSRRTKNNPCLIGDPGVGKTAIVEGLAQKIALGEVPELLKNKRIVQLNIGNLVAGTKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER++KL++E++ S ++I+FIDE+HTL+GAG AEGA+DAANILKPSLA+GE Q IGA
Sbjct: 261 GEFEERMRKLIKEVRDSRDVIVFIDEIHTLVGAGGAEGAVDAANILKPSLAKGEFQVIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK+IEKD ALERRFQPV V EP++++TI+ILKGLR++YE HH+++YTD AL +A
Sbjct: 321 TTLDEYRKYIEKDAALERRFQPVFVGEPTIEDTIEILKGLRDKYEAHHRVKYTDAALEAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A+LS +YISDRFLPDKAIDLIDEAG+RVRL P+ +ELEK+L + KEK AV Q
Sbjct: 381 AKLSARYISDRFLPDKAIDLIDEAGARVRLSAMNPPDFIKELEKKLETVRKEKEAAVASQ 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKA-ETEAGDVGPVVTEVDIQHIVSAWTGIP 510
+FEKA LRD+E L ++ +E KA + + P+V E DI IVS WTGIP
Sbjct: 441 EFEKAAALRDQERKLSEEL-------EEKRKAWQAKNSQEEPIVDEEDIALIVSEWTGIP 493
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V +++ +ES RLL+MEE +HKR+I Q+EAV ++RAIRRAR GLK+P RPI SF+F GPT
Sbjct: 494 VMQLTEEESQRLLRMEEEIHKRIIDQEEAVSVVARAIRRARSGLKDPKRPIGSFLFLGPT 553
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL+KALA + FG E +MIRLDMSEFMERH VSKLIG+PPGYVGY EGG+LTEAVR
Sbjct: 554 GVGKTELSKALAEFLFGDENSMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVR 613
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRPY VVLFDEIEKAHPDVFN++LQILEDGRLTD +GR VDFKNT++IMTSN+G+ + K
Sbjct: 614 RRPYAVVLFDEIEKAHPDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSNLGAQDLMK 673
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G IGF + E + K + E +++ FRPEF+NR+DE++VF+ L + E+ +I D
Sbjct: 674 GP-SIGFSV-TSESGLDFEDAKKNILEAVRRTFRPEFINRIDEIVVFKPLAEKELLQIVD 731
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+M+K+V RL K + ++VT+ + ++++GY P +GARPLRR I R +ED +A+ +L
Sbjct: 732 LMIKDVAKRLAEKGLIIEVTDAAKNFLLKKGYEPKFGARPLRRTIQRYIEDKLADILLEG 791
Query: 811 EIKEGDSVIVDVDSD 825
+IK G+ + VDV D
Sbjct: 792 KIKPGEVIKVDVADD 806
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 53/69 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M++ FTE+A +VI LA EA RLGH+ IG+EH+LLGLL EG+GVAA VL +LG D +R
Sbjct: 1 MWQFFTERARRVIQLAHREALRLGHDVIGTEHILLGLLAEGDGVAAHVLMSLGIDLDEVR 60
Query: 151 TQVIRMVGE 159
+V ++VG+
Sbjct: 61 KRVEQLVGK 69
>gi|444433681|ref|ZP_21228818.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia soli
NBRC 108243]
gi|443885471|dbj|GAC70539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia soli
NBRC 108243]
Length = 828
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/768 (57%), Positives = 580/768 (75%), Gaps = 27/768 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKEPQEAGTGGRSSEAGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E LV + E K + +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAANLRDKE-------KQLVGERAEREK-QWRSGDM-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D K S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 650 SDISK-AVGLGFSSGDDSK-SNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEI 707
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+++++T++ + + G++P GARPLRR I R +ED ++E
Sbjct: 708 IQMVDLMIGRVEAQLKNKDMDIELTDQAKNLLARRGFDPVLGARPLRRTIQREIEDQLSE 767
Query: 806 KMLAREIKEGDSVIVDVDS-DG-----NVTVLNGSSGAPESLADPLPV 847
K+L E+ G V+VDVD DG + T S P L D +PV
Sbjct: 768 KILFNELTAGQIVVVDVDGWDGEGDGEDATFTFAGSDRPRELPD-VPV 814
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQQA 52
>gi|403510030|ref|YP_006641668.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402799243|gb|AFR06653.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 813
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/740 (57%), Positives = 578/740 (78%), Gaps = 20/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ +A GA S+ + L+++G NLT+ A E KLDPV+GR +IERV+
Sbjct: 119 QLLHGYQGKEPQATGAS--SESTPSTSLVLDQFGRNLTQAARESKLDPVIGRDKEIERVM 176
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ+I G++P+T++ K++ TLD+G LVAG++Y
Sbjct: 177 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVKGEIPETLKDKQLYTLDLGALVAGSRY 236
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 237 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 296
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKD ALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+
Sbjct: 297 ATTLDEYRKYLEKDAALERRFQPIQVDEPTITHAIEILKGLRDRYEAHHRVSITDSALVA 356
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AAQL+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE + ++ ++ ++K A+
Sbjct: 357 AAQLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDDKIAKVRRDKESAIDE 416
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD E L++K + K E +AGD+ VV EVD I +++A T
Sbjct: 417 QDFEKAASLRDDE-------KQLLNKKAQREK-EWKAGDMD-VVAEVDEELIAEVLAAST 467
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LH+RVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 468 GIPVFKLTEEESSRLLRMEDELHRRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFA 527
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I+LDMSEFME+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 528 GPSGVGKTELSKTLAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTE 587
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH D+FN +LQ+LE+GRLTD++GR VDFKNT++IMT+N+G+
Sbjct: 588 KVRRKPFSVVLFDEIEKAHNDIFNSLLQVLEEGRLTDAQGRNVDFKNTVIIMTTNLGTRD 647
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G +GF + D+ +++Y R+K+ V+EELK FRPEFLNR+D++IVF QLT+ E+ +
Sbjct: 648 ISK-GVAMGFAKE-DDANTNYERMKAKVSEELKTNFRPEFLNRVDDVIVFHQLTEKEIFQ 705
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ + RLK KD+ +++ ++ + E G++P GARPLRR I R +ED ++EK+
Sbjct: 706 IVDLMIANLDSRLKEKDMGIELRPNAKKVLSERGFDPVLGARPLRRTIQREIEDQLSEKI 765
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L ++K G V++D + +G
Sbjct: 766 LFGDLKAGQIVVIDAEGEGT 785
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQA 52
>gi|152968278|ref|YP_001364062.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151362795|gb|ABS05798.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 840
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/761 (56%), Positives = 569/761 (74%), Gaps = 19/761 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
++ G + GG S P L+++G NLT+ A EGKLDPV+GR+ QIERV
Sbjct: 140 TLLSGHEGKEPTTAAGGESQREGTPAGSLVLDQFGRNLTQAAREGKLDPVIGREQQIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGE GVGKTA+ EGLAQ I G VP+T+ K++ TLD+G LVAG++
Sbjct: 200 MQVLSRRTKNNPMLIGEAGVGKTAVVEGLAQEIVRGQVPETLRDKQIYTLDLGALVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ +
Sbjct: 260 YRGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTV 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDE++K+IEKDPALERRFQP++VPEPS+ I+ILKGLR+RYE HH++ TD ALV
Sbjct: 320 GATTLDEFKKYIEKDPALERRFQPIQVPEPSLPHAIEILKGLRDRYEAHHRVTITDGALV 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA ++ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++ + + +EK A+
Sbjct: 380 AAATMADRYINDRYLPDKAIDLIDEAGARLRIRRMTAPPDLREFDERIADVRREKESAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFEKA LRD+E + AQ + + E +G + +V EVD I +++
Sbjct: 440 AQDFEKAASLRDKEKTVTAQ--------RATREKEWRSGGLD-IVAEVDEELIAEVLAVS 490
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV +++ +ES RLL ME LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF
Sbjct: 491 TGIPVVRLTEEESTRLLNMEAELHKRVIGQNDAIKALSQAIRRTRAGLKDPKRPGGSFIF 550
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLT
Sbjct: 551 AGPTGVGKTELAKALAEFLFGEEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLT 610
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 EKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNLGTR 670
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +GF K ++Y+R+KS V EELKQ+FRPEFLNR+D+ +VF QLT+ E+
Sbjct: 671 DISK-ATGLGFAAGSQTKQTNYDRMKSKVNEELKQHFRPEFLNRVDDTVVFPQLTQEEIV 729
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
+I D+ML V RLK +D+ +++T + + +GY+P GARPLRR I R +ED ++EK
Sbjct: 730 QIVDLMLANVEARLKDRDMGIELTPSAKVLLATKGYDPVLGARPLRRTIQRDIEDVLSEK 789
Query: 807 MLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
+L + + G + + + +G V +G D LPV
Sbjct: 790 ILFGDFRAGQIISIGTEGEGKEQVFT-YTGHARPTDDDLPV 829
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEIIGQGQQA 73
>gi|377561326|ref|ZP_09790784.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
gi|377521514|dbj|GAB35949.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
Length = 848
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/738 (58%), Positives = 570/738 (77%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYETHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E LV++ E K + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKE-------KQLVNERAEREK-QWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISK-AVGLGF-TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+ +++T+R + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMIARVETQLKNKDMAIELTDRAKSLLARRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L E+ G V+VDV+
Sbjct: 789 KILFNELTPGQIVLVDVE 806
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|392945929|ref|ZP_10311571.1| ATPase with chaperone activity, ATP-binding subunit [Frankia sp.
QA3]
gi|392289223|gb|EIV95247.1| ATPase with chaperone activity, ATP-binding subunit [Frankia sp.
QA3]
Length = 834
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/762 (58%), Positives = 582/762 (76%), Gaps = 23/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G+ + L+++G NLT A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKGETATSGAPAEGTPSTSL-VLDQFGRNLTAAARESKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+
Sbjct: 379 AASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIAGVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWT 507
QDFEKA LRD+E L L +K K + E +AGD+ VV EV +I +++ WT
Sbjct: 439 QDFEKAASLRDKEKTL------LSEKAKR--EKEWKAGDMD-VVAEVGDEEIAEVLAIWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LH+RVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETARLLRMEDELHRRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+
Sbjct: 610 RVRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I KG IGF + D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +
Sbjct: 670 ISKGP-GIGFATGQGQVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSENEIIQ 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ML V +LK KD+ L++T + + ++GY+P GARPLRR I R +ED ++EK+
Sbjct: 727 IVDLMLARVDVQLKNKDMALELTSAAKALLAKKGYDPVLGARPLRRTIQREIEDVLSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLPV 847
L +K G+ V+ DV+ +G+ V G + P + D PV
Sbjct: 787 LYGTLKPGEIVVGDVEGEGDDAKFVFRGET-KPNQVPDAPPV 827
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|258651101|ref|YP_003200257.1| ATPase AAA-2 domain-containing protein [Nakamurella multipartita
DSM 44233]
gi|258554326|gb|ACV77268.1| ATPase AAA-2 domain protein [Nakamurella multipartita DSM 44233]
Length = 846
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/742 (57%), Positives = 570/742 (76%), Gaps = 19/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G + A GG S G +L +++G NLT+ A EGKLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKETAAAEGGRSEGTPSTSLVLDQFGRNLTQSAREGKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP T++ K + TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIIRGDVPQTLKDKHLYTLDLGSLVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIIMFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK++EKD ALERRFQP++V EP+V TI+ILKGLR+RYE HH++ TD+ALVSA
Sbjct: 320 TTLDEYRKYVEKDAALERRFQPIQVGEPTVAHTIEILKGLRDRYEAHHRITITDDALVSA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YISDR+LPDKAIDLIDEAG+R+R+R P + R+ +++L + ++K A+ Q
Sbjct: 380 ATLADRYISDRYLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDEKLAGVRRDKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD E L A+ S E KA + GD+ V++EVD I +++ WTG
Sbjct: 440 DFEKAAALRDTEKQLLARKS-------EREKAWKD-GDL-DVISEVDDEQIAEVLANWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLLKMEE LHKR+IGQD+AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEETTRLLKMEEELHKRIIGQDQAVKAVSQAIRRTRAGLKDPKRPSGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL KALA + FG E+A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELTKALAEFLFGDEDALIQVDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDEIEKAH D++N +LQ+LEDGRLTD +GRTVDFKNT+++ TSN+G+ I
Sbjct: 611 VRRKPFSVVLFDEIEKAHQDIYNTLLQVLEDGRLTDGQGRTVDFKNTVIVFTSNLGTQDI 670
Query: 689 EKGGRRIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
K +G + +S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT E+ +
Sbjct: 671 SKA---VGMGFQQGNNSESNYERMKQKVNDELKRHFRPEFLNRIDDVVVFHQLTTEEINQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+MLK V L+ KD+ L++T+ + + E G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMLKRVEAALRNKDMSLELTDAAKTLLGERGFDPVLGARPLRRTIQREIEDKLSEKI 787
Query: 808 LAREIKEGDSVIVDVDSDGNVT 829
L EI+ G ++VDV +VT
Sbjct: 788 LFDEIRPGQIILVDVQDATDVT 809
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ ++
Sbjct: 61 AQVEEIIGQGQQS 73
>gi|359421709|ref|ZP_09213621.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
gi|358242425|dbj|GAB11690.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
Length = 848
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/737 (58%), Positives = 571/737 (77%), Gaps = 20/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG S+ P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSTEAGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGRENEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+
Sbjct: 380 AAAASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHPEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ DS Y R+K V +ELK++FRPEFLNR+D++IVF QLT ++
Sbjct: 671 SDISK-AVGMGFSKSNDD-DSQYERMKQKVNDELKKHFRPEFLNRIDDVIVFHQLTSEQI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LK KDI+L++TE+ ++ + + G++P GARPLRR I R +ED ++E
Sbjct: 729 VEMVDLMIGRVEKQLKGKDIDLELTEKAKQLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDV 822
K+L E++ G V+VDV
Sbjct: 789 KILFNEVEPGQIVVVDV 805
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
TQV ++G+ +A
Sbjct: 61 TQVEEIIGQGQQA 73
>gi|238061431|ref|ZP_04606140.1| ATPase [Micromonospora sp. ATCC 39149]
gi|237883242|gb|EEP72070.1| ATPase [Micromonospora sp. ATCC 39149]
Length = 818
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/764 (57%), Positives = 586/764 (76%), Gaps = 25/764 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 119 QLLSGYQGKEPAAAGTTTGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVM 177
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 178 QVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIKGEVPETLKDKQLYTLDLGALVAGSRY 237
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 238 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 297
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 298 ATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVA 357
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+
Sbjct: 358 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDA 417
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A +LRD+E L Q K + E +AGD+ VV+EVD I ++ WT
Sbjct: 418 QDFERAAQLRDKEKQLLGQ--------KAQREKEWKAGDLD-VVSEVDDEQIAEVLGNWT 468
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 469 GIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 528
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 529 GPSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTE 588
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+
Sbjct: 589 KVRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRD 648
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+
Sbjct: 649 VAK-AVSLGFQASED-SESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQGEILS 706
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DIM+ + +L+ KD+ L++T+ ++ + ++G++P GARPLRR I R +ED+++E++
Sbjct: 707 IVDIMIARIETQLRNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERI 766
Query: 808 LAREIKEGDSVIVDV-----DSDGNVTVLNGSSGAPESLADPLP 846
L E+ G V+VD D D + V GS P + D +P
Sbjct: 767 LFNELIPGQIVVVDCEGDPEDIDKSKLVFRGSD-RPAEVPDAIP 809
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQQA 52
>gi|108804998|ref|YP_644935.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108766241|gb|ABG05123.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 834
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/734 (58%), Positives = 558/734 (76%), Gaps = 12/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT ++ KV+ LA EA +LGHNYIG+EH+LLGL+RE EGVAARVL NL DP +R +V+
Sbjct: 80 FTPRSKKVLELALREALQLGHNYIGTEHILLGLVRESEGVAARVLSNLDVDPDKVRREVV 139
Query: 155 RMVGESTEAVG---AGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
R +G G A GG G + T L++YG NLT LAEEGKLDPV+GR +IER+
Sbjct: 140 RRLGGGRTQRGRAEASARGGVEGKRPKTRQLDQYGRNLTALAEEGKLDPVIGRTQEIERI 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNP +IGEPGVGKTAI EGLA IA+G VP+ + K+V TLD+G LVAG+K
Sbjct: 200 MQILVRRTKNNPVIIGEPGVGKTAIVEGLANEIAAGRVPEILADKEVYTLDLGALVAGSK 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFEERLKK+M+EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP+LARGE+Q I
Sbjct: 260 YRGEFEERLKKIMKEIIDHGDIILFIDEIHNLVGAGAAEGAIDAASILKPALARGEIQVI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATT+DEYRK++EKD ALERRFQ ++V EP+V+ET ILKGLRERYE HHK+ TDEAL
Sbjct: 320 GATTIDEYRKYVEKDKALERRFQTIQVGEPTVEETELILKGLRERYEEHHKIEITDEALR 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+A++L +YISDRFLPDKAIDL+DEA S+++++ P +E++ EL ++ + K A+
Sbjct: 380 AASRLGDRYISDRFLPDKAIDLVDEAASKMKIKTMSQPPYYKEIDDELAEVRRRKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q++E+A LRD E L + L + +E E +G E +I IVS WTGI
Sbjct: 440 SQEYEEAARLRDSEKKLALRKRELERQWREGKGEEQRRVSIG----ENEIAEIVSMWTGI 495
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLLKMEE LH RV+GQDEA+KA+SR+IRR GLK+PNRP SF+F GP
Sbjct: 496 PVRKLTEEESARLLKMEEALHGRVVGQDEAIKAVSRSIRRTMAGLKDPNRPSGSFVFLGP 555
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELA+ LA Y FG ++AMIRLDMSE+MERHTVS+L+GSPPGYVGY EGGQLTE V
Sbjct: 556 TGVGKTELARTLAEYLFGDQDAMIRLDMSEYMERHTVSRLVGSPPGYVGYDEGGQLTEQV 615
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RRRPY+VVLFDEIEKAHPDVFN++LQILEDG+LTD++GRTVDFKN +LIMTSNVG+ I
Sbjct: 616 RRRPYSVVLFDEIEKAHPDVFNILLQILEDGQLTDAQGRTVDFKNVVLIMTSNVGAQHIN 675
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K + +GF E+ SY +KS VT EL++ FRPE LNR+DE+IVF +L + V++I
Sbjct: 676 K-TKTLGFGA--GEEGLSYKEMKSRVTSELRKIFRPELLNRIDEIIVFHKLEREHVRQII 732
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+I +K + ++L +++ L+ T +++ EEGY+P++GARPL+R + R++ED M+E +L
Sbjct: 733 EIQVKRLREQLAERNVTLEFTPEALDKLAEEGYDPAFGARPLKRVLQRMVEDPMSEMILR 792
Query: 810 REIKEGDSVIVDVD 823
+I +G V ++ +
Sbjct: 793 GDIPDGSKVTIEAN 806
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+A KV++LAQEEAR HNYIG+EHLLLGLLRE +GVAA+ L +LG ++R
Sbjct: 1 MFERFTERARKVVVLAQEEARHFNHNYIGTEHLLLGLLREEDGVAAQALNHLGVTLDDVR 60
Query: 151 TQVIRMVGESTEAVGA 166
QV +VG E G+
Sbjct: 61 EQVESIVGYGEEGSGS 76
>gi|385800597|ref|YP_005837001.1| ATPase [Halanaerobium praevalens DSM 2228]
gi|309389961|gb|ADO77841.1| ATPase AAA-2 domain protein [Halanaerobium praevalens DSM 2228]
Length = 806
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/728 (58%), Positives = 552/728 (75%), Gaps = 11/728 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T ++ KV+ LA +EAR++GHNYIG+EHLLLGL+REGEGVA R+L +L D SNI+ ++I
Sbjct: 80 LTPRSKKVLNLAMDEARKMGHNYIGTEHLLLGLIREGEGVAVRILMDLDTDISNIKEEII 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++G + N L+EY +LT++A+E KLDPVVGR +I RV+Q+L
Sbjct: 140 DLLGGK---INRRRKSKKINNNTKNLDEYSRDLTEMAKENKLDPVVGRDEEINRVIQVLS 196
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQRI S VP+ + K+V++LD+ LVAG+KYRGEF
Sbjct: 197 RRTKNNPVLIGEPGVGKTAIIEGLAQRIISESVPELLLNKRVVSLDLSSLVAGSKYRGEF 256
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK +M EI ++ IILFIDE+HTL+GAGAAEGAIDAANILKP+LARGELQ IGATTL
Sbjct: 257 EKRLKSVMNEIIENGNIILFIDEMHTLVGAGAAEGAIDAANILKPALARGELQAIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQ V V E S++E I ILKGLR+ YE HHK++ TD+A+ A L
Sbjct: 317 DEYRKYIEKDAALERRFQSVLVEENSIEEAIDILKGLRDPYEAHHKVKITDQAIKDAVLL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YISDRFLPDKAIDLIDEA S+VRL + P E ++L K+L ++ KEK A++ Q+FE
Sbjct: 377 SNRYISDRFLPDKAIDLIDEAASKVRLSKSTRPPEFKQLRKKLEEVEKEKEAAIKNQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA +RD+E + ++ L + E E G VV DI IVS+WTGIPV K+
Sbjct: 437 KAARMRDQEKEFSQELEEL------KNSWENEKGKADAVVISEDIAEIVSSWTGIPVTKL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
E+++LL++E LH+RVIGQDEA+ A+S A+RRAR GLK P RPI SFIF GPTGVGK
Sbjct: 491 EEAETEKLLRLESELHERVIGQDEAINAVSEAVRRARAGLKAPKRPIGSFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELAK LA F EEAMIR+DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLTE VRRRPY
Sbjct: 551 TELAKTLAETMFNDEEAMIRVDMSEYMEKHSVSRLVGSPPGYVGHDEGGQLTEPVRRRPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+LFDEIEKAHPDVFN++LQILEDG LTDS GR VDFKNT+++MTSNVG+ IEK +
Sbjct: 611 SVILFDEIEKAHPDVFNILLQILEDGVLTDSHGRKVDFKNTIVVMTSNVGADFIEKQS-Q 669
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + DEKD +Y +K V +L++ F+PEFLNRLDE IVF L + +K+I D+ML
Sbjct: 670 LGFKAENDEKD-NYENMKDNVMSKLRKTFKPEFLNRLDETIVFHALNQEHIKKIVDLMLD 728
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
E+ +RL K+IEL++TE+ +E++ E+GY+ +GARPLRR I R +E+++A K+L +E +
Sbjct: 729 ELKERLAEKEIELEMTEKAKEKLAEDGYDSEFGARPLRREIQRQIENTLAVKILDKEFEN 788
Query: 815 GDSVIVDV 822
V +DV
Sbjct: 789 NKKVTIDV 796
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 55/79 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF +FTE+A KV+ +A++EA +L H+Y+G+EH+L GL+ EG+ +AAR L + G +
Sbjct: 1 MFAKFTERARKVLSIAEQEALKLKHSYVGTEHILYGLVAEGQAIAARSLIDNGLKEEIVE 60
Query: 151 TQVIRMVGESTEAVGAGVG 169
+++I M+GE + V +G
Sbjct: 61 SKIIEMIGEGEDEVEGSIG 79
>gi|317131213|ref|YP_004090527.1| ATPase AAA-2 domain-containing protein [Ethanoligenens harbinense
YUAN-3]
gi|315469192|gb|ADU25796.1| ATPase AAA-2 domain protein [Ethanoligenens harbinense YUAN-3]
Length = 825
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/760 (56%), Positives = 568/760 (74%), Gaps = 24/760 (3%)
Query: 93 ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 152
+ T + +I LA EA+ LGH Y+G+EHLL+ LLRE + VA V+ LG +P + +
Sbjct: 79 QSLTPRGKHIIELAYMEAQNLGHGYVGTEHLLMALLREADSVAVAVMVRLGCEPKELYAE 138
Query: 153 VIRMVGESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ 203
+IR +G +T A G G+ PTL+++G +LT+ A+ +LDPV+GR
Sbjct: 139 IIRAIGGNTNQPNDKGASPAPGGAQPARRPGSNTPTLDQFGRDLTEQAKAARLDPVIGRA 198
Query: 204 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 263
+IERV+QIL RRTKNNPCLIGEPGVGKTAIAEGLA++I G +P+T++ K+V++LD+
Sbjct: 199 KEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEGLAEKIVEGRLPETLKDKRVVSLDLTG 258
Query: 264 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 323
++AGTKYRGEFEER+KK +EE++++ +ILFIDE+HT+IGAGAAEGAIDAANILKP LAR
Sbjct: 259 MIAGTKYRGEFEERIKKALEEVRKAGNVILFIDELHTIIGAGAAEGAIDAANILKPMLAR 318
Query: 324 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 383
GE+Q IGATTL+EYRKHIEKD ALERRFQPV V EPS +E + ILKGLR++YE HHK+R
Sbjct: 319 GEIQVIGATTLNEYRKHIEKDAALERRFQPVTVGEPSQEEALLILKGLRDKYEAHHKVRI 378
Query: 384 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 443
TD AL +A LS +YISDRFLPDKAIDL+DEA SRVRL P + R+LE++L+++ +E
Sbjct: 379 TDGALGAAVTLSARYISDRFLPDKAIDLMDEAASRVRLNAFTAPPDLRDLEEKLKKLAEE 438
Query: 444 KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQH 501
K AV+ QDFE+A +LRD E + Q+ E +K E A + V VTE DI
Sbjct: 439 KEAAVKAQDFERAAKLRDEEKHVNEQM--------ENTKKEWMADNARSVKEVTEEDIAD 490
Query: 502 IVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPI 561
IV+ WTG+PV+K++ +ES+RLL ME+ LHKRV+GQ+EAV A+++AIRR RVGLK+P RP+
Sbjct: 491 IVAGWTGVPVKKLAEEESERLLHMEDVLHKRVVGQNEAVAAVAKAIRRGRVGLKDPKRPV 550
Query: 562 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 621
SFIF GPTGVGK+EL+KALA FG E AMIR+DMSE+ME+HTVS+++GSPPGYVGY E
Sbjct: 551 GSFIFLGPTGVGKTELSKALAEALFGDENAMIRVDMSEYMEKHTVSRMVGSPPGYVGYDE 610
Query: 622 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 681
GGQLTE VRR+PY+V+LFDEIEKAHPDVFN++LQILEDG LTD++GR VDFKNT++IMTS
Sbjct: 611 GGQLTEKVRRKPYSVLLFDEIEKAHPDVFNILLQILEDGILTDAQGRKVDFKNTVIIMTS 670
Query: 682 NVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLT 741
NVG+ +I RR+GF + D +S IKS V EL++ FRPEFLNR+D++IVF QLT
Sbjct: 671 NVGARMITD-NRRLGF-ANADNAIASDKEIKSDVMGELRRTFRPEFLNRVDDIIVFHQLT 728
Query: 742 KLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 801
++++IA ML+ V R++ +I + ++ + +EG++P YGARPLRRAI +ED
Sbjct: 729 SADIQQIAGRMLETVAKRIQAMEIGITFSDEVVTHIAKEGFDPVYGARPLRRAIQSKVED 788
Query: 802 SMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESL 841
+E+ML +IK GD+V + D T++ ++ AP+ +
Sbjct: 789 KFSEEMLEGKIKTGDTVHTVLKDD---TIVFETAAAPQQV 825
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF++FTEKA + LA E AR LGH Y+G+EH+L+GLLREG GVAA+VLE G +
Sbjct: 1 MFDKFTEKAAAALNLALESARDLGHTYVGTEHILIGLLREGSGVAAKVLEQHGVQADAVE 60
Query: 151 TQVIRMVG 158
V VG
Sbjct: 61 KLVAESVG 68
>gi|111226012|ref|YP_716806.1| ATP-dependent protease [Frankia alni ACN14a]
gi|111153544|emb|CAJ65303.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Frankia alni ACN14a]
Length = 834
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/762 (58%), Positives = 581/762 (76%), Gaps = 23/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G+ + L+++G NLT A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKGETATSGAPAEGTPSTSL-VLDQFGRNLTAAARESKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+
Sbjct: 379 AASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIAGVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWT 507
QDFEKA LRD+E L L +K K + E +AGD+ VV EV +I +++ WT
Sbjct: 439 QDFEKAASLRDKEKTL------LSEKAKR--EKEWKAGDMD-VVAEVGDEEIAEVLAIWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETARLLRMEDELHKRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+
Sbjct: 610 RVRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I KG IGF D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +
Sbjct: 670 ISKGP-GIGFATGQGAVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSENEIIQ 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ML V +LK KD+ L++T + + ++GY+P GARPLRR I R +ED ++EK+
Sbjct: 727 IVDLMLARVDIQLKNKDMALELTSAAKALLAKKGYDPVLGARPLRRTIQREIEDVLSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLPV 847
L +K G+ V+ DV+ +G+ V G + P + D PV
Sbjct: 787 LYGTLKPGEIVVGDVEGEGDDAKFVFRGET-KPNQVPDAPPV 827
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|403718430|ref|ZP_10943315.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
gi|403208500|dbj|GAB97998.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
Length = 864
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/761 (57%), Positives = 580/761 (76%), Gaps = 22/761 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E GA VGG SS P L+++G NLT+ A E KLDPV+GR +IER
Sbjct: 140 QLLSGYQGKEPAGASVGGQSSQEATPAGSLVLDQFGRNLTQAARENKLDPVIGRTSEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPILIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKHIYTLDLGALVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRKHIEKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKHIEKDPALERRFQPIQVAEPTLSHAIEILKGLRDRYEAHHRVSITDAAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA ++ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAANMADRYINDRYLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHVRREKEAAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
GQDFEKA +LRD E L + K + E ++GD+ VV EVD I +++A
Sbjct: 440 DGQDFEKAAKLRDDERRLI--------EAKNKREKEWKSGDM-DVVAEVDEELIAEVLAA 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ +ES RLL ME LHKR++G D+A+KA+S+AIRR R GLK+P RP SFI
Sbjct: 491 STGIPVFKLTEEESSRLLNMEAELHKRIVGMDDAIKALSQAIRRTRAGLKDPRRPGGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAK LA + FG E+++I LDMSEF E+HTVS+L GSPPGYVGY EGGQL
Sbjct: 551 FAGPTGVGKTELAKTLAEFLFGDEDSLITLDMSEFAEKHTVSRLFGSPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTD++GR VDFKNT++IMT+N+G+
Sbjct: 611 TEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K +GF D SSY R+K+ VT+ELKQ+FRPEFLNR+D+ IVF QL + E+
Sbjct: 671 RDISK-AVSLGFSAGNDAA-SSYERMKNKVTDELKQHFRPEFLNRVDDTIVFPQLKEEEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+I D+M+ ++ +RLK KD+ ++++ + + ++GY+P GARPLRRAI R +ED ++E
Sbjct: 729 VQIVDLMIAKLDERLKDKDMGIELSPAAKSLLAKKGYDPVLGARPLRRAIQRDIEDVLSE 788
Query: 806 KMLAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADP 844
++L ++ G+ V VDV+ +G+ +G+S PE P
Sbjct: 789 QILYGQVGAGEIVGVDVEGEGDEAKFTFHGTSKEPEPATVP 829
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQDIIGQGQQA 73
>gi|84497246|ref|ZP_00996068.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
gi|84382134|gb|EAP98016.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
Length = 848
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/764 (56%), Positives = 581/764 (76%), Gaps = 23/764 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQQVI 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++ G+ A G G GG + G +L +++G NLT A EGKLDPV+GR+ +IE
Sbjct: 140 QLISGYQGGKEGAAAGVGQGGPAEGTPAGSLVLDQFGRNLTVAAREGKLDPVIGREKEIE 199
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG
Sbjct: 200 RVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGEVPETLKDKQLYTLDLGALVAG 259
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 SRYRGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
+GATTLDEYRKHIEKD ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ TD A
Sbjct: 320 VVGATTLDEYRKHIEKDAALERRFQPIQVAEPTLAHTIEILKGLRDRYEAHHRVSITDSA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
LV+AA ++ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE +++++ + +EK A
Sbjct: 380 LVAAANMADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIQAVVREKESA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVS 504
+ GQDFEKA LRD E +L+ + K + E ++GD+ VV EVD I +++
Sbjct: 440 IDGQDFEKAARLRDDEKNLRNE--------KSQRETEWKSGDL-DVVAEVDEELIAEVLA 490
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
A TGIPV K++ +ES RLL ME+ LHKRV+G D+A+KA+S+AIRR R GLK+P RP SF
Sbjct: 491 ASTGIPVFKLTEEESSRLLHMEDELHKRVVGMDDAIKALSQAIRRTRAGLKDPRRPGGSF 550
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LAA+ FG E+++I+LDMSE+ E+HTVS+L GSPPGYVGY EGGQ
Sbjct: 551 IFAGPTGVGKTELAKTLAAFLFGDEDSLIQLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQ 610
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDE+EKAHP++FN +LQ+LEDGRLTDS+GR VDFKNT++IMT+N+G
Sbjct: 611 LTEKVRRKPFSVVLFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRVVDFKNTVIIMTTNLG 670
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K +GF E S Y+R+K+ V +ELKQ+FRPEFLNR+D+ IVF QLT+ E
Sbjct: 671 TRDISKAS--LGFSAG-PETRSDYDRMKAKVVDELKQHFRPEFLNRVDDTIVFPQLTQDE 727
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+ + ++ RLK KD+ +++T + + + GY+P GARPLRR I R +ED ++
Sbjct: 728 IIQIVDLEIAKLDKRLKDKDMGMELTPAAKTLLAKRGYDPVLGARPLRRTIQREIEDVLS 787
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
EK+L E+K G+ V VD +G + + D +PVV
Sbjct: 788 EKILFGELKAGEIVAVDATGEGKDDTFTFAGARKAEIVD-VPVV 830
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVA++ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLIHEGEGVASKALESLGISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEIIGQGQQA 73
>gi|256372657|ref|YP_003110481.1| ATPase AAA-2 domain-containing protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009241|gb|ACU54808.1| ATPase AAA-2 domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 829
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/760 (56%), Positives = 573/760 (75%), Gaps = 20/760 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGHNYIG+EH+LLGL+REGEG A+VL LG D + +R QV+
Sbjct: 80 FTVRAKKVLEYSLREALQLGHNYIGTEHMLLGLVREGEGTGAKVLLALGVDLTRVRQQVM 139
Query: 155 RMVG--ESTEAVGAGVG---GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ E VG G G G + P L+++G NLT++A + KLDPVVGR +IER+
Sbjct: 140 QILSSTEGRPTVGQGAGPSQGQDAPGGSPILDQFGRNLTQMARDRKLDPVVGRDNEIERM 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RR KNNP LIGEPGVGK+AI EGLAQRI +G+VPDT+ GK++ TLD+G LVAG++
Sbjct: 200 MQVLSRRQKNNPVLIGEPGVGKSAIVEGLAQRIVAGEVPDTLRGKQIYTLDLGALVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++E++ + IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 260 YRGDFEERLKKVLKEVRTKENIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATT+DEYRKH+EKD ALERRFQP+KV EPS+++T +ILKGLRERYE HH + TDEALV
Sbjct: 320 GATTIDEYRKHLEKDAALERRFQPIKVGEPSIEDTFEILKGLRERYEAHHNVTITDEALV 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA ++ +YISDRFLPDKAIDLIDEAGSR+R++ P E R++E +L + ++K A+
Sbjct: 380 AAANMADRYISDRFLPDKAIDLIDEAGSRLRIKRVTSPPELRQVENDLTRTRRDKEGAIA 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
Q+F++A L RE S LV + E+ A GD G V EV I +++ WT
Sbjct: 440 RQNFDEAKRLAARE-------SELVSRKAELEAAWKREGDERFGVVDEEV-IAEVLAMWT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV +++ +E+ +LL+ME+ LH R++GQ+EA+ A+SRAIRR R GLK+P RP SFIF
Sbjct: 492 GIPVNQLTEEETSKLLRMEDELHHRIVGQEEAISALSRAIRRTRAGLKDPRRPSGSFIFL 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAK LA + FG ++A+I+LDMSE+ME+HTV++L+G+PPGYVGY EGGQLTE
Sbjct: 552 GPTGVGKTELAKTLAEFLFGDQDALIQLDMSEYMEKHTVARLVGAPPGYVGYDEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
AVRRRP++VVLFDEIEKAHPD+FN +LQILEDGRLTD++GRTVDFKNT+LIMTSN+G+
Sbjct: 612 AVRRRPFSVVLFDEIEKAHPDIFNTLLQILEDGRLTDAQGRTVDFKNTILIMTSNLGTQD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ + ++GF +D ++ R+K + E LK +F+PEFLNR+DE+IVF +L + EV
Sbjct: 672 LHRA--QVGF--AKSSEDVNHERMKMRLNEALKTHFKPEFLNRIDEVIVFHELRRDEVMA 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I ++ + V D+L+ K I +++TE + + + GY+ GARPLRR I RL+ED +AE++
Sbjct: 728 IVSLLFRRVQDQLQAKGIGIELTEAAKGFLADRGYDRELGARPLRRTIQRLVEDPLAERL 787
Query: 808 LAREIKEGDSVIVDVDSDGNV-TVLNGSSGAPESLADPLP 846
L +E K GD V+VDV+ + V V+ G P LA P
Sbjct: 788 LHQEFKAGDMVVVDVEGEEIVFRVMEGLEPPPMELAGSNP 827
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEG+AA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVLVLAQEEAKLLHHNYIGTEHILLGLVHEGEGIAAKALESLGVSLDQLR 60
Query: 151 TQVIR 155
+V R
Sbjct: 61 EEVTR 65
>gi|152964564|ref|YP_001360348.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151359081|gb|ABS02084.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 851
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/758 (57%), Positives = 580/758 (76%), Gaps = 19/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 98 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 157
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ G G SG+ + L+++G NLT+ A EGKLDPV+GR PQIERV+
Sbjct: 158 QLLSGYQGKEPATSGGPQEGTPSGSLV--LDQFGRNLTQAAREGKLDPVIGRDPQIERVM 215
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ + G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 216 QVLSRRTKNNPILIGEPGVGKTAVVEGLAQSVVRGEVPETLKDKQIYTLDLGALVAGSRY 275
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERL+K+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 276 RGDFEERLRKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 335
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDE+RKHIEKDPALERRFQP++VPEP++ I+ILKGLR+RYE HH++ TD ALV+
Sbjct: 336 ATTLDEFRKHIEKDPALERRFQPIQVPEPTLAHAIEILKGLRDRYEAHHRVSITDAALVA 395
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +Y++DR+LPDKAIDLIDEAG+R+R+R P + RE ++ + + +EK A+
Sbjct: 396 AATLADRYVNDRYLPDKAIDLIDEAGARLRIRRMTAPPDLREFDERIADVRREKESAIDA 455
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD E L AQ KG+ + + ++GD+ V+ EVD I +++ T
Sbjct: 456 QDFEKAASLRDNEKKLLAQ------KGER--EKQWKSGDMD-VIAEVDEELIAEVLAVST 506
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV +++ +ES RLL ME LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 507 GIPVVRLTEEESTRLLNMEAELHKRVIGQNDAIKALSQAIRRTRAGLKDPKRPGGSFIFA 566
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 567 GPTGVGKTELAKALAEFLFGEEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 626
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 627 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRMVDFKNTVIIMTTNLGTRD 686
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G GF + ++Y R+KS V +ELKQ+FRPEFLNR+D+++VF QLT+ E+ +
Sbjct: 687 ISK-GVGTGFAAGSQTQQTNYERMKSKVNDELKQHFRPEFLNRVDDIVVFPQLTQEEIVQ 745
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ +K V DRLK KD+ +++T + + +GY+P GARPLRR I R +ED ++EK+
Sbjct: 746 IVDLFIKRVDDRLKDKDMGIELTPSAKVLLATKGYDPVLGARPLRRTIQRDIEDVLSEKI 805
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
L +++ G V VD + +G + E + +P+
Sbjct: 806 LFGDLRAGQIVSVDTEGEGTEQKFTFEGTSKEDVPEPV 843
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 19 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 78
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 79 EQVQEIIGQGQQA 91
>gi|297618415|ref|YP_003703574.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146252|gb|ADI03009.1| ATPase AAA-2 domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 830
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/749 (57%), Positives = 579/749 (77%), Gaps = 27/749 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KV+ LA EEAR G NY+G+EHLLL LLRE + VAA+VL +LG P +R QV+
Sbjct: 84 ITPRAKKVLNLAFEEARLQGVNYVGTEHLLLALLREEQSVAAQVLNSLGIRPDAVREQVM 143
Query: 155 RMVG-ESTEAVGAGVGGGSSGN----------------KMPTLEEYGTNLTKLAEEGKLD 197
++G E +A G G N K P L+ + +LT+LA E KLD
Sbjct: 144 LLLGAEGFQANYQEPGTGEMKNQSQGPGVAGRRGRGRGKTPVLDTFSRDLTQLAREHKLD 203
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PV+GR+ +I+RV Q+L RRTKNNP LIG+PGVGKTAI EGLAQRI VP+ + K+V+
Sbjct: 204 PVIGREKEIDRVTQVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIVENKVPEVLSDKRVV 263
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
LD+ +VAGTKYRGEFE+RL K++ EI+ + +II+FIDE+HT++GAGAAEGAIDAANIL
Sbjct: 264 VLDLSTMVAGTKYRGEFEDRLTKVVNEIRNAGDIIVFIDELHTIVGAGAAEGAIDAANIL 323
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGE QCIGATT+DEYRKH+EKD ALERRFQP+ V EP+V+ETI+IL+GLR+RYE
Sbjct: 324 KPALARGEFQCIGATTIDEYRKHVEKDAALERRFQPIMVDEPTVEETIEILRGLRDRYEA 383
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH ++ TDEA+ +AA+LS +YI+DRFLPDKAIDLIDEA S+VRLR+ LP+E +E+E L
Sbjct: 384 HHGVKITDEAIEAAARLSARYITDRFLPDKAIDLIDEAASKVRLRNYVLPDELKEMEARL 443
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
+I KEK EA+ Q++EKA LRD E +K +I + + MS+ + ++G VVT
Sbjct: 444 EEIEKEKEEAIMAQEYEKAAGLRDEEQRVKEEIEK--QRKEWMSRRDRDSG----VVTPD 497
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
+I H+VS+WTGIPV +++ +ES+RL+K+EE LH+RVIGQDEAVKA+++A+RRAR GLK+P
Sbjct: 498 EIAHVVSSWTGIPVVQMAEEESERLVKLEEILHQRVIGQDEAVKAVAQAVRRARAGLKDP 557
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
RPI SFIF GPTGVGK+ELA+ALA FGSEEA+IRLDMSE+ME+H V+++IGSPPGYV
Sbjct: 558 KRPIGSFIFLGPTGVGKTELARALAEALFGSEEALIRLDMSEYMEKHAVARMIGSPPGYV 617
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTE VRR+PY+V+L DEIEKAHPDV+N++LQ+LEDGRLTD KGRTVDF+NT++
Sbjct: 618 GYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVYNILLQVLEDGRLTDGKGRTVDFRNTVV 677
Query: 678 IMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
IMTSNVG+ I K R +GF D DE+D + ++K + E+LK FRPEFLNR+DE+IV
Sbjct: 678 IMTSNVGADTIRK-ARNLGFGRQDADEQD--HEKMKEKIMEKLKATFRPEFLNRIDEVIV 734
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
F L E+ +I +++++++ RL+ + LQVT+ ++ ++++G++P +GARPL+RAI
Sbjct: 735 FHSLNDTELGQIFELLIRDLRKRLEDQGFRLQVTDDAKKFIIKQGHDPVFGARPLKRAIQ 794
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSD 825
+ +E+ ++E++L R ++ GD++++DV++D
Sbjct: 795 KNVENLLSEEILKRTVEPGDTILIDVEND 823
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M RFT++A + I+ AQEEAR LGH +G+EH+LLGL+REGEGV A+ + LG D +R
Sbjct: 1 MLRRFTQRAQRAIIHAQEEARNLGHPAVGTEHILLGLIREGEGVGAKAILALGVDLETVR 60
Query: 151 TQVIRMVGESTE 162
++ +++G+ E
Sbjct: 61 NELKKVLGDVGE 72
>gi|168187707|ref|ZP_02622342.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
gi|169294451|gb|EDS76584.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum C str. Eklund]
Length = 813
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/734 (56%), Positives = 562/734 (76%), Gaps = 13/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ L+ EAR GHNYI EH+LL L+++ +G+A +L +LG + ++
Sbjct: 82 LTPRTKRLLELSLLEARDKGHNYITPEHMLLALIKKEDGLAYTILNDLGVNFEKLQA--- 138
Query: 155 RMVGESTEAVGAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
++ + G V G ++ + PTL++YG +LTK+AEEGKLDPV+GR + ERV++
Sbjct: 139 KLENDPNLKQGKQVSGENNERVTHNTPTLDKYGRDLTKMAEEGKLDPVIGRGAETERVLE 198
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RR KNNPCLIG+PGVGKTAIAEGLAQ+I G++P+ ++ K+V+ LD+ +VAG+KYR
Sbjct: 199 ILCRRIKNNPCLIGDPGVGKTAIAEGLAQKIVQGNIPEILKNKRVVALDISSMVAGSKYR 258
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK+M+EI + +ILFIDE+HT++GAG AEGAIDA+NILKP+LARGE+QCIGA
Sbjct: 259 GEFEERVKKIMDEIYRDKNVILFIDEIHTIVGAGGAEGAIDASNILKPALARGEIQCIGA 318
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT+DEYRK+IEKD ALERRFQPV V EP+ +E+I+IL+GLR++YE HH ++ TDEA+V+A
Sbjct: 319 TTIDEYRKYIEKDSALERRFQPVNVGEPTKEESIEILRGLRDKYEAHHGVKITDEAIVAA 378
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YI+DRFLPDKAIDLIDEAG++VR+++ P +++E EL +I KEK +AV Q
Sbjct: 379 VELSDRYITDRFLPDKAIDLIDEAGAKVRIKNLTAPPSLKDMEVELEKIMKEKEDAVIVQ 438
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
DFEKA LRD+E +LK Q+ D K+ S TE V+E I +VS W+ +PV
Sbjct: 439 DFEKAASLRDKEKNLKQQLKDFTDNWKKQSHMITET------VSEDQIAEVVSTWSNVPV 492
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
EK++ E+DRLLK+EETLHKRVIGQ+EAVK+I+RA+RRARVGLK+ RPI SFIF GPTG
Sbjct: 493 EKLTEKEADRLLKLEETLHKRVIGQNEAVKSIARAVRRARVGLKDSKRPIGSFIFLGPTG 552
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA FG E MIR+DMSE+ME+H VS+L+GSPPGY+G+ EGGQLTE VRR
Sbjct: 553 VGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGSPPGYIGHDEGGQLTEQVRR 612
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY+V+LFDEIEKAHP+VFN++LQILEDGRLTDSKG+TV+FKNT++I+TSNVG+S I K
Sbjct: 613 HPYSVILFDEIEKAHPEVFNILLQILEDGRLTDSKGKTVNFKNTIIILTSNVGASRINKQ 672
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF DE + Y ++K+ V +ELK FRPEFLNR+D++IVF L + +KEI +
Sbjct: 673 N-TLGFSRSEDEAEDEYEKMKNNVMQELKDNFRPEFLNRIDDIIVFHSLDEENLKEIVKL 731
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
ML EV +RL+ KDI ++ + + +VE+G + +YGARPLRR I R +ED ++E++L
Sbjct: 732 MLDEVANRLEDKDIYIEFDDETEKFLVEKGIDVTYGARPLRRIITRTIEDKLSEEILKGV 791
Query: 812 IKEGDSVIVDVDSD 825
IK+ D V V+++
Sbjct: 792 IKQDDKVYTTVENN 805
>gi|302535160|ref|ZP_07287502.1| ATP-dependent chaperone ClpB [Streptomyces sp. C]
gi|302444055|gb|EFL15871.1| ATP-dependent chaperone ClpB [Streptomyces sp. C]
Length = 841
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/728 (58%), Positives = 565/728 (77%), Gaps = 18/728 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G E+ AG + + L+++G NLT+ A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYTGGGKESATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K + TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TDEALV
Sbjct: 320 ATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQ 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + ++K A+
Sbjct: 380 AATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAAVRRDKESAIDS 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD E L L K K + E +AGD+ VV EVD I +++ T
Sbjct: 440 QDFEKAASLRDSEKQL------LTAKSKR--EKEWKAGDMD-VVAEVDGELIAEVLATAT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKTLAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G +GF D K + Y+R+K+ V EELKQ+FRPEFLNR+D+ +VF QL++ ++ +
Sbjct: 671 ISK-GFNLGFAAQGDVK-TGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQ 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ +V +RLK +D+ ++++ ++ + + GY+P GARPLRR I R +ED ++EK+
Sbjct: 729 IVDLMIAKVDERLKDRDMGIELSGDAKQLLAKRGYDPIMGARPLRRTIQREIEDLLSEKI 788
Query: 808 LAREIKEG 815
L E++ G
Sbjct: 789 LFGELRPG 796
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|453382789|dbj|GAC82697.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
paraffinivorans NBRC 108238]
Length = 827
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/738 (57%), Positives = 568/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGKVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + + KEK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIAEARKEKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAAALRDKEKQLVAE--------RAEREKQWRNGDM-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K +GF D+ S Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 650 GDISK-AVGMGFS-SKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDVIVFHQLTQDEI 707
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 708 IQMVDLMIGRVETQLKNKDMAIELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 767
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L E+ G V+VDV+
Sbjct: 768 KILFGELTPGQIVLVDVE 785
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQQA 52
>gi|158312055|ref|YP_001504563.1| ATPase [Frankia sp. EAN1pec]
gi|158107460|gb|ABW09657.1| ATPase AAA-2 domain protein [Frankia sp. EAN1pec]
Length = 834
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/762 (57%), Positives = 579/762 (75%), Gaps = 23/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G+ + L+++G NLT A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKGDPATAGAPAEGTPSTSL-VLDQFGRNLTAAARESKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++ + + ++K A+
Sbjct: 379 AASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDERIANVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV---DIQHIVSAWT 507
QDFEKA LRD+E L A+ K + E +AGD+ VV EV +I +++ WT
Sbjct: 439 QDFEKAASLRDKEKTLLAE--------KAKREKEWKAGDMD-VVAEVGDEEIAEVLAIWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LH+RVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETARLLRMEDELHRRVIGQEQAIKAVSQAIRRTRAGLKDPKRPGGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+++I+LDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKTLAEFLFGDEDSLIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPDVFN +LQILEDGRLTDS+GR VDFKNT+LIMTSN+G+
Sbjct: 610 RVRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNTVLIMTSNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I KG IGF D Y R+K+ V +ELKQ+FRPEFLNR+D++IVF QL++ E+ +
Sbjct: 670 ISKGP-GIGFATGQGAVD--YERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLSENEIIQ 726
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ML V +LK KD+ L++T + + + GY+P GARPLRR I R +ED ++EK+
Sbjct: 727 IVDLMLARVDSQLKNKDMALELTPAAKALLAKRGYDPVLGARPLRRTIQREIEDILSEKI 786
Query: 808 LAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPLPV 847
L ++ G+ V+ DV+ +G V G P S+ D P+
Sbjct: 787 LYGTLRPGEIVVGDVEGEGEEAKFVFRGEP-KPNSVPDSPPI 827
>gi|377565955|ref|ZP_09795231.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
gi|377526869|dbj|GAB40396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
Length = 847
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/740 (57%), Positives = 568/740 (76%), Gaps = 22/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSSEAGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYETHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++ + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E LV++ E K + +GD+ VV EV+ I ++
Sbjct: 440 DAQDFEKAASLRDKE-------KQLVNERAEREK-QWRSGDM-DVVAEVNDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
S I K +G D S Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E
Sbjct: 671 SDISKA---VGLGFSKTGSDGSQYERMKQKVNDELKKHFRPEFLNRIDDIVVFHQLTQDE 727
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ ++ D+ML V L+ KD+ ++VT++ + + + G++P GARPLRR I R +ED ++
Sbjct: 728 IIQMVDLMLARVETALRNKDMAIEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLS 787
Query: 805 EKMLAREIKEGDSVIVDVDS 824
EK+L E++ G V++DV++
Sbjct: 788 EKILFGEVEPGQIVLIDVEN 807
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|392392052|ref|YP_006428654.1| chaperone ATPase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523130|gb|AFL98860.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 826
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/740 (59%), Positives = 573/740 (77%), Gaps = 18/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +V+ LA EEARR G +YIG+EHLLLGLL EGEGVAARVL NLG +P I QV+
Sbjct: 79 LTPRVKRVLELAHEEARRHGVSYIGTEHLLLGLLMEGEGVAARVLRNLGVNPERIWKQVV 138
Query: 155 RMVGESTEAV---GAGVGGGSSGNK----MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++G ++ + G G N P L E+G +LT+ A +GKLDPVVGR+ +IE
Sbjct: 139 QLLGGQSDDIPMPGGAPGPSPVKNNGTANTPALNEFGRDLTQQARDGKLDPVVGREDEIE 198
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RVVQ+L RRTKNNP LIGEPGVGKTAIAEGLAQRI S VP+T+ GK+V+TLD+ +VAG
Sbjct: 199 RVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSNKVPETLAGKRVVTLDLSAVVAG 258
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
+KYRGEFEERLKK+MEEI+ II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQ
Sbjct: 259 SKYRGEFEERLKKVMEEIRVDGRIIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQ 318
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
CIGATTLDEYRK+IEKDPALERRFQP+ V EP+V++ IQIL GLR+RYE HH+ + TDEA
Sbjct: 319 CIGATTLDEYRKYIEKDPALERRFQPITVGEPTVEQAIQILFGLRDRYEAHHRTKITDEA 378
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ +A ++S +YISDRFLPDKAIDL+DEA SRVRL P + + LE+++ + EK A
Sbjct: 379 VEAAVKMSDRYISDRFLPDKAIDLMDEAASRVRLAAFTAPPDLKSLEEKIETLKGEKEAA 438
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
V Q+FEKA + RD E L+ ++S L + + SK + + VT DI IV++WT
Sbjct: 439 VLSQEFEKAAKFRDEEHQLREELSQLRNTWE--SKRDVNQSE----VTADDIAQIVASWT 492
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV+K++ +ES+RLL +EETLH+RV+GQ++AVKA+SRA+RRAR GLK+P RP+ SFIF
Sbjct: 493 GIPVKKLAQEESERLLGLEETLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGSFIFL 552
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELA+AL+ FG E+A+IR+DMSE+ME+H VS+L+G+PPGY+G+ EGGQLTE
Sbjct: 553 GPTGVGKTELARALSEALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTE 612
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
AVRR+PY+V+L DEIEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+N ++IMTSNVG+S
Sbjct: 613 AVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSNVGASF 672
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF DE ++ Y + S V EELK+ FRPEFLNR+DE++VF L + +
Sbjct: 673 MRKEA--LGFASRRDE-ETEYKNMSSRVMEELKRTFRPEFLNRVDEIVVFHSLQAEGLMK 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I +I++K+V RLK + +LQV + E + +EG +P++GARPLRRAI RL+EDS++EK+
Sbjct: 730 ITEILMKQVNGRLKEQGYDLQVEKSALELIAKEGNDPAFGARPLRRAIQRLIEDSLSEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E K GD + V+ +GN
Sbjct: 790 LLGEFKSGDK--IKVEEEGN 807
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M E++TEKA+K + A EEA+R+G + IG+EHLLLGL+ EGEG+A++ L +G P IR
Sbjct: 1 MNEKYTEKALKALQFASEEAKRMGSSVIGTEHLLLGLVAEGEGIASKSLHGIGVTPEKIR 60
Query: 151 TQVIRMVG 158
Q+ + G
Sbjct: 61 EQIGNLTG 68
>gi|220911112|ref|YP_002486421.1| ATPase AAA [Arthrobacter chlorophenolicus A6]
gi|219857990|gb|ACL38332.1| ATPase AAA-2 domain protein [Arthrobacter chlorophenolicus A6]
Length = 830
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/762 (57%), Positives = 573/762 (75%), Gaps = 19/762 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP---TLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ + E GAGVGGG L+++G NLT+ A E KLDPV+GR+ ++ERV
Sbjct: 140 QLLSGYQGKETTGAGVGGGQPEGAPAGSVVLDQFGRNLTQAARENKLDPVIGREQEMERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++
Sbjct: 200 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 260 YRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL
Sbjct: 320 GATTLDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALA 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + ++ EK A+
Sbjct: 380 SAASLAERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIAKLKMEKESAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFE A LRD+E + IS +K + + ++EVD I +++
Sbjct: 440 AQDFEGAAALRDKEQKM---ISERSEKERHWKSGGMDD------ISEVDEDLIAEVLANS 490
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +ES RLLKME+ LHKRV+GQDEA+KA+S+AIRR R GLK+P RP SFIF
Sbjct: 491 TGIPVFKLTEEESSRLLKMEDELHKRVVGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIF 550
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLT
Sbjct: 551 AGPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLT 610
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 EKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTR 670
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 DISK-SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEII 728
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
EI D+ + + RLK KD+ +++T + + GY+P+ GARPLRR I R +ED ++EK
Sbjct: 729 EIVDLFVTRLEKRLKDKDMGIELTSAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEK 788
Query: 807 MLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
+L EI GD V+VDV+ +G+ + A + + P V
Sbjct: 789 ILFGEIHPGDIVVVDVEGEGDDAKFTFAGNAKPRIPEIAPSV 830
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 EQVQEIIGQGQQA 73
>gi|289522311|ref|ZP_06439165.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504147|gb|EFD25311.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 832
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/740 (57%), Positives = 570/740 (77%), Gaps = 12/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ +A +V+ LA EAR +G NY+G+EH+LLGLL EGEG+AA+VL ++G D + +V+
Sbjct: 81 LSPRAKRVLDLAMREARNMGVNYVGTEHILLGLLAEGEGIAAQVLTSMGLDMQKVYQEVV 140
Query: 155 R-MVGESTEAVGA--GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
R + G + +G G+ S K PTL++ G +L ++A +G+LDPV+GR+ +I+RV+Q
Sbjct: 141 RYLSGGEVDQMGQSQGLSRKKSHTKTPTLDQLGIDLVEMARQGELDPVIGREREIQRVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNPCLIG+PGVGKTAI EGLAQRIA+G+VP+ ++ K+++ L++G LVAGTKYR
Sbjct: 201 ILSRRTKNNPCLIGDPGVGKTAIVEGLAQRIATGEVPEVLKNKRIVQLNIGNLVAGTKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER++KL++E++ S ++I+FIDE+HTL+GAG AEGA+DAANILKPSLA+GE Q IGA
Sbjct: 261 GEFEERMRKLVKEVRDSKDVIVFIDEIHTLVGAGGAEGAVDAANILKPSLAKGEFQVIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK+IEKD ALERRFQPV V EP++++TI+ILKGLR++YE HH+++ TD+AL +A
Sbjct: 321 TTLDEYRKYIEKDSALERRFQPVFVGEPNIEDTIEILKGLRDKYEAHHRVKITDKALEAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A+LS +YISDR+LPDKAIDLIDEAG+RVRL PE +ELEK+L + KEK AV Q
Sbjct: 381 ARLSARYISDRYLPDKAIDLIDEAGARVRLSTMNPPEFIKELEKKLETVRKEKEAAVASQ 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+FEKA LRD E L ++ +K KE +++ P+V E DI +VS WTGIPV
Sbjct: 441 EFEKAAALRDEERKLSEELE---EKRKEWQAKKSQE---EPIVDEEDIALVVSEWTGIPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+++ +ES RLL+MEE +HKR+I Q+EAV +++AIRRAR GLK+P RPI SF+F GPTG
Sbjct: 495 TQMTEEESQRLLRMEEEIHKRIIDQEEAVSIVAKAIRRARSGLKDPQRPIGSFLFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA + FG E +MIRLDMSEFMERH VSKLIG+PPGYVGY EGG+LTEAVRR
Sbjct: 555 VGKTELSKALAEFMFGDENSMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
RPY VVLFDEIEKAHPDVFN++LQILEDGRLTD +GR VDFKNT++IMTSN+G+ + KG
Sbjct: 615 RPYAVVLFDEIEKAHPDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSNLGAQDLMKG 674
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
IGF + E + K + + +++ FRPEF+NR+DE++VF+ L + E+ +I DI
Sbjct: 675 P-AIGFAAE-SEYQIDFEAAKKNILDAVRRTFRPEFINRIDEIVVFKPLGEKELLQIVDI 732
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M+ +V +RL K I ++V++ + ++++GY P +GARPLRR I R +ED +A+ +L +
Sbjct: 733 MIDDVAERLAEKGIFIEVSDAAKGFLLKKGYEPKFGARPLRRTIQRYIEDRLADILLEGK 792
Query: 812 IKEGDSVIVDVDSDGNVTVL 831
IK + VDV D N+T +
Sbjct: 793 IKPESVIKVDVSED-NITFI 811
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 53/69 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M++ FTE+A +V+ LA EA RLGH+ IG+EH+LLGLL EG+GVAA VL +LG D +R
Sbjct: 1 MWQFFTERARRVVQLAHREALRLGHDVIGTEHILLGLLAEGDGVAAHVLMSLGIDLDEVR 60
Query: 151 TQVIRMVGE 159
+V ++VG+
Sbjct: 61 KRVEQLVGK 69
>gi|119714730|ref|YP_921695.1| ATPase [Nocardioides sp. JS614]
gi|119535391|gb|ABL80008.1| ATPase AAA-2 domain protein [Nocardioides sp. JS614]
Length = 861
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/761 (58%), Positives = 576/761 (75%), Gaps = 20/761 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGH+YIG+EH+LLGL+REGEGVAA+VL+ LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHSYIGTEHILLGLIREGEGVAAQVLQKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E+ G+ G+SG P+ L+++G NLT+ A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGFQGKESAGSAAATGASGGDAPSSSLVLDQFGRNLTQDAREGKLDPVIGREQEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+QIL RRTKNNP LIGEPGVGKT I EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQILSRRTKNNPVLIGEPGVGKTTIVEGLAQDIVKGNVPETLKDKQIYTLDLGALVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK++EKD ALERRFQP++V EPS+ TI++LKGLR+RYE HH++ TDEAL
Sbjct: 320 IGATTLDEYRKYLEKDAALERRFQPIQVAEPSIAHTIEMLKGLRDRYEAHHRVTITDEAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
VSAA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE + ++ ++ + K A+
Sbjct: 380 VSAATLADRYISDRFLPDKAIDLIDEAGSRLRIRRMTAPADLREYDDKIGEVRQRKEAAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
GQDFE A LRD E L+ K E K + AGD+ V EVD I +++
Sbjct: 440 DGQDFEAAARLRDEE-------KQLILKKSEREK-QWRAGDMDE-VAEVDEELIAEVLAV 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIP+ K+S +ES RLLKME+ LHKRVIGQ+EAVKA+SRAIRR R GLK+P RP SFI
Sbjct: 491 ATGIPIVKLSEEESTRLLKMEDELHKRVIGQEEAVKALSRAIRRTRAGLKDPKRPGGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+ L+K LA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTWLSKTLAEFLFGDEDALIQLDMSEFGEKHTVSRLFGSPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G +GF D SY R+KS V+EELKQ+FRPEFLNR+DE+IVF L++ ++
Sbjct: 671 RDIAK-GINLGFQQSGDAA-GSYERMKSKVSEELKQHFRPEFLNRVDEVIVFPPLSQEQI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D M+ V R+K +D+ +++T+ + + E G++P GARPLRR I R +ED +AE
Sbjct: 729 VHMVDNMIASVELRMKDRDMRIELTQNAKNLLAERGFDPVLGARPLRRTIQREIEDVLAE 788
Query: 806 KMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLP 846
KML E+ G V+VDV+ +G S L D P
Sbjct: 789 KMLYGEVGPGQIVLVDVEGEGPTATFTFSGQKVGDLPDLPP 829
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 AQVEEIIGQGQQA 73
>gi|302530766|ref|ZP_07283108.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302439661|gb|EFL11477.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 849
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/757 (56%), Positives = 581/757 (76%), Gaps = 29/757 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ GE + G+G G G+ + + L+++G N+T LA EGKLDPV+GR +IERV
Sbjct: 140 QLLSGYQTGEKSTESGSGRGEGTPSSSL-VLDQFGRNMTVLAREGKLDPVIGRGKEIERV 198
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++
Sbjct: 199 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVPETLKDKQLYTLDLGSLVAGSR 258
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 259 YRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTI 318
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV
Sbjct: 319 GATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALV 378
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 379 AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAID 438
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFE+A LRD E L Q KG+ + + + GD+ VV EVD I +++ W
Sbjct: 439 AQDFERAARLRDEEKQLLGQ------KGER--EKQWKDGDL-DVVAEVDDEQIAEVLANW 489
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF
Sbjct: 490 TGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIF 549
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL+KALA++ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLT
Sbjct: 550 AGPSGVGKTELSKALASFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLT 609
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 610 EKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTS 669
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +GF D + Y ++K V EE+K++FRPEFLNR+D++IVF QL + ++
Sbjct: 670 DISK-SVSLGFSSGADSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLNQEQII 727
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+M+ V +LK KD+E+++TE+ + + + G++P GARPLRR I R +ED ++EK
Sbjct: 728 QMVDLMIGRVETQLKAKDMEIELTEKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEK 787
Query: 807 MLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLAD 843
+L E++ G ++VDV+ G SG PE D
Sbjct: 788 ILFGEVEPGQIIVVDVE---------GWSGNPEDRDD 815
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|359773810|ref|ZP_09277200.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
effusa NBRC 100432]
gi|359309092|dbj|GAB19978.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
effusa NBRC 100432]
Length = 848
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/739 (57%), Positives = 569/739 (76%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG S+ P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPQEAGTGGRSTEAGSPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKTLVAE--------RAEREKQWRSGDM-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D+ S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 671 SDISK-AVGLGF-TKGDDSTSNYERMKLKVNDELKKHFRPEFLNRIDDIVVFHQLTQEEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ ++VT++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMLNRVEGALKNKDMAIEVTDKAKSLLSKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L +I G V+VDV++
Sbjct: 789 KILFGDITPGQIVLVDVEN 807
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|375097571|ref|ZP_09743836.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
gi|374658304|gb|EHR53137.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
Length = 849
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/736 (57%), Positives = 569/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ G G G G+ + + L+++G NLT A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGTGRGEGTPSSSL-VLDQFGRNLTASAREGKLDPVIGRSKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 379 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q S + K+ GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMETELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE S Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ E
Sbjct: 670 ISK-SVSLGFSSGSDE-GSRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQDQIIE 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+EL++T++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMVTRVEGQLKGKDMELELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G +IVDVD
Sbjct: 788 LFGEVQPGQIIIVDVD 803
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|441522288|ref|ZP_21003937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
sihwensis NBRC 108236]
gi|441458115|dbj|GAC61898.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
sihwensis NBRC 108236]
Length = 846
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/745 (58%), Positives = 575/745 (77%), Gaps = 21/745 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG G SS + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPAEAGTGARSSESGTPSTSLVLDQFGRNLTTAASEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + + KEK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIAEARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L A+ + + + AGD+ VV EV+ I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAE--------RAEREKQWRAGDL-DVVAEVNDEEIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AV A+SRAIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVAAVSRAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D D + S+Y+R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISK-AVGMGFSKD-DGRGSNYDRMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD++L++TE+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IKMVDLMIGRVEAQLKNKDMDLELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVDS-DGNVT 829
K+L EIK G V++DV+ DG T
Sbjct: 789 KILFEEIKAGQIVVIDVEGWDGEGT 813
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|330850854|ref|YP_004376604.1| Clp-family ATP-binding protease [Fistulifera sp. JPCC DA0580]
gi|328835674|dbj|BAK18970.1| Clp-family ATP-binding protease [Fistulifera sp. JPCC DA0580]
Length = 922
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/773 (54%), Positives = 563/773 (72%), Gaps = 41/773 (5%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT +A +V+ +A E + LG N++G+EH+LL L+ E +GVA R L+
Sbjct: 68 GRGTGFVASEI--PFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALIAESDGVAMRTLD 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGG--------SSGNKMPTLEEYGTNLTKLAE 192
L D + +R ++ + E+ E + + G+ PTL+EY N+TK A
Sbjct: 126 KLNVDINKLRNLILTYIEETQEEILRPLTQAEKFLLERDKKGSPTPTLDEYAENITKEAI 185
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
EG LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA+AEGLAQ I + VPD ++
Sbjct: 186 EGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTAVAEGLAQLILTEKVPDFLD 245
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+ IDE+HTL+GAGAAEGA+D
Sbjct: 246 GSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVIIVIDEIHTLVGAGAAEGAVD 305
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQPV V EPSV TI+IL+GLR
Sbjct: 306 AANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQPVHVEEPSVGTTIEILRGLR 365
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
++E HH L Y D+AL AA LS +Y++DR+LPDKAID++DEAG+RVRL + +LP R
Sbjct: 366 SKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLDEAGARVRLENRRLPLGLRS 425
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI-----SALVDKGKEMSKAETEA 487
L EL++ K+K + ++ DFE A +L D EM+++ I SAL + + S+ + +
Sbjct: 426 LMHELQETIKDKEDCIKEHDFEAAKQLLDHEMEVRTHIRIMKQSALTSEARGFSRRDVD- 484
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
+VTE D+ +VS WTGIPV K++ ES RLLKME+T+H+R+IGQ AVKA+SRAI
Sbjct: 485 -----MVTETDVSDVVSNWTGIPVTKITGSESARLLKMEDTIHERIIGQQHAVKAVSRAI 539
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGL+NPNRPIASFIF+GPTGVGK+EL KALA Y F SE++MIRLDMSE+ME+HTV+
Sbjct: 540 RRARVGLRNPNRPIASFIFAGPTGVGKTELTKALADYMFASEDSMIRLDMSEYMEKHTVA 599
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPDVFN++LQIL+DGRLTDSKG
Sbjct: 600 KLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKG 659
Query: 668 RTVDFKNTLLIMTSNVGSSVIEK------------GGRRIGFD-------LDYDEKDSS- 707
R +DF NTL+IMT+N+G+ +IE+ GG +I D + KD
Sbjct: 660 RLIDFTNTLIIMTTNLGAKIIERESGIKPKSEQGEGGFKITPDAVVGWEPMPEPIKDPEL 719
Query: 708 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 767
+ R+ LV +ELK +FRPEFLNR+DE+IVF LT++++ EI D+M+K+V RLK K I L
Sbjct: 720 FERVTKLVNDELKNFFRPEFLNRIDEIIVFNHLTRIDIWEICDLMVKQVQKRLKEKGINL 779
Query: 768 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
V + + +EGY+P YGARPLRRAIM+ LED++AE+ L++ + + V
Sbjct: 780 IVDLSVQAFLTDEGYDPLYGARPLRRAIMKYLEDTLAEQCLSKTLYPNTKIYV 832
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE+FTE AIKVIML+QEEARR+GHN++G+E LLLG++ + G+ AR L+ L R
Sbjct: 1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGVIGQRHGIGARALKKLKVTLKKAR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
++ +G T V + +
Sbjct: 61 KEIELYIGRGTGFVASEI 78
>gi|433602206|ref|YP_007034575.1| putative ATP-dependent Clp protease ATP-binding subunit
[Saccharothrix espanaensis DSM 44229]
gi|407880059|emb|CCH27702.1| putative ATP-dependent Clp protease ATP-binding subunit
[Saccharothrix espanaensis DSM 44229]
Length = 856
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/767 (56%), Positives = 580/767 (75%), Gaps = 26/767 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV-GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ G ST A GG G +L +++G NLT A EGKLDPV+GR +IERV+Q
Sbjct: 140 QLLSGYSTSKETAESGGRGEGTPSSSLVLDQFGRNLTASAREGKLDPVIGRTKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGLAQ + G+VP+T++ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLAQMVVKGEVPETLKDKQLYTLDLGSLVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRK++EKDPALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+A
Sbjct: 320 TTLDEYRKYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ Q
Sbjct: 380 ATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFE+A +LRD E L Q K + + + GD+ VV EVD I +++ WTG
Sbjct: 440 DFERAAKLRDSEKQLLGQ--------KAEREKQWKDGDL-DVVAEVDDEQIAEVLANWTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LHKR+IGQ +AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEETTRLLRMEDELHKRIIGQVDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 PSGVGKTELSKALAQFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDEIEKAH +V+N +LQ+LEDGRLTD +GRTVDFKNT++I TSN+G+S I
Sbjct: 611 VRRKPFSVVLFDEIEKAHQEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNLGTSDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF D S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ E+ ++
Sbjct: 671 SK-AVGLGFTSGQDTA-SNYERMKNKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEIIKM 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ V +LK KD+ +++T+R + + + G++P GARPLRR I R +ED ++EK+L
Sbjct: 729 VDLMIARVETQLKNKDMAIELTDRAKMLLAKRGFDPVLGARPLRRTIQREIEDQLSEKIL 788
Query: 809 AREIKEGDSVIVDVD--------SDGNVTVLNGSSGAPESLADPLPV 847
EI+ G +I DV+ D V G S P S+ D PV
Sbjct: 789 FGEIQPGQIIITDVEGWDGESEADDKAHFVFRGES-KPLSVPDAPPV 834
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|453364329|dbj|GAC79902.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
malaquae NBRC 108250]
Length = 848
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/738 (58%), Positives = 574/738 (77%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG S+ + P+ L+++G NLT A EGKLDPV+GR+ ++ER
Sbjct: 140 QLLSGYQGKEPETAGTGGRSNDSGTPSTSLVLDQFGRNLTTAASEGKLDPVIGREKEVER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
++Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I SG+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 IMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVSGNVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 AAAASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L +S ++ K+ AGD+ +V+EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKKL---VSERAEREKQW-----RAGDL-DIVSEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETKRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D D + S+Y+R+K V +ELK++FRPEFLNR+D++IVF QL + E+
Sbjct: 671 SDISK-AVGMGFSKD-DGRGSNYDRMKQKVNDELKKHFRPEFLNRIDDVIVFHQLKQDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LK KD+E+++TE+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 LEMVDLMIGRVEKQLKNKDMEIELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L EIK G ++VDV+
Sbjct: 789 KILFEEIKGGQIILVDVE 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|405981990|ref|ZP_11040314.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
gi|404390781|gb|EJZ85847.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
Length = 841
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/742 (58%), Positives = 578/742 (77%), Gaps = 21/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL NLGAD +R V+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLTNLGADLQTVRHNVV 139
Query: 155 RMV-----GESTEAVGAGVGGGSS--GNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+++ G++ GVGG SS G K + L+++G NLTK A E KLDPV+GR+ +
Sbjct: 140 QLLSGYQGGQAEGGETVGVGGSSSPQGQKSGSAILDQFGRNLTKAAHEQKLDPVIGRKNE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+QIL RRTKNNP LIGEPGVGKT++ EGLAQ I +GDVP+T++ K++ +LDMG LV
Sbjct: 200 MERVMQILSRRTKNNPVLIGEPGVGKTSVVEGLAQAIVAGDVPETLKDKQLYSLDMGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRKHIEKD ALERRFQPV+V +P+V+ET ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTNDEYRKHIEKDAALERRFQPVRVEQPTVEETELILKGLRDRYEAHHRVIITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ +AA LS +YISDRFLPDKAIDLIDEAG+R+R+R P E RE+++++ + ++K
Sbjct: 380 EAIKAAATLSDRYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELREIDEKIADVRRKKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIV 503
A+ QDFE A LRD+E L + ++ ++E ++GD+ + VTE I ++
Sbjct: 440 SAIDDQDFEAAASLRDQEKKLSEERAS--------KESEWKSGDMDRIAEVTEESIAEVL 491
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
+ TGIPV K++ ES +LL ME+ LHKR+IGQDEAVKA+S++IRR R GLK+P RP S
Sbjct: 492 AMSTGIPVFKLTETESAKLLHMEDALHKRIIGQDEAVKALSKSIRRTRAGLKDPKRPGGS 551
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVG+ EGG
Sbjct: 552 FIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFGEKHTSSRLFGAPPGYVGFDEGG 611
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
+LTE VRRRP++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+
Sbjct: 612 ELTEKVRRRPFSVVLFDEVEKAHPDIFNTLLQILEDGRLTDSQGRLVDFKNTVIIMTTNL 671
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ I K G GF E + Y+R++S V+EELKQ+FRPEFLNR+DE++VF L +
Sbjct: 672 GTRDINK-GVMTGFQA-AGELSTDYDRMRSKVSEELKQHFRPEFLNRVDEVVVFPPLKRN 729
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ I D+M+ ++ +R+ +++++++T RE + ++GY+P GARPLRRAI R +ED +
Sbjct: 730 EIVRIVDLMMGQLSERMADRNMKIELTADARELLADKGYDPVLGARPLRRAIQREIEDPL 789
Query: 804 AEKMLAREIKEGDSVIVDVDSD 825
+EK+L + K+G+SV VDVD D
Sbjct: 790 SEKILFGDFKDGESVQVDVDPD 811
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 56/74 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE + +R
Sbjct: 1 MFERFTDRARRVIVLAQDEARNLNHNYIGTEHLLLGLITEGEGVAAKALEMMDVSRDKVR 60
Query: 151 TQVIRMVGESTEAV 164
+V+ ++G + V
Sbjct: 61 DEVVTIIGSGDQPV 74
>gi|431792439|ref|YP_007219344.1| chaperone ATPase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782665|gb|AGA67948.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 827
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/741 (58%), Positives = 573/741 (77%), Gaps = 22/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ LA EEARR G Y+G+EHLLLGLL EGEGVAARVL NLG P I QV+
Sbjct: 79 LTPRVKRILELANEEARRHGVTYVGTEHLLLGLLMEGEGVAARVLRNLGVSPERIWKQVV 138
Query: 155 RMVGESTE------AVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++G + A V + G + P L E+G +LT+ A +GKLDPVVGR+ +IE
Sbjct: 139 QLLGGQPDDTPMPNGAPANVNAKNPGPSNTPALNEFGRDLTQQARDGKLDPVVGREDEIE 198
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RVVQ+L RRTKNNP LIGEPGVGKTAIAEGLAQRI S VP+T+ GK+V+TLD+ +VAG
Sbjct: 199 RVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIISNKVPETLAGKRVVTLDLSAVVAG 258
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
+KYRGEFEERLKK+MEEI+ +II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQ
Sbjct: 259 SKYRGEFEERLKKVMEEIRVDGKIIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQ 318
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
CIGATTLDEYRK+IEKDPALERRFQP+KV EP+V++ IQIL GLR+RYE HH+ + TDEA
Sbjct: 319 CIGATTLDEYRKYIEKDPALERRFQPIKVGEPTVEQAIQILYGLRDRYEAHHRTKITDEA 378
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ +A ++S +YISDRFLPDKAIDL+DEA SRVRL P + + LE+++ + EK A
Sbjct: 379 IEAAVKMSDRYISDRFLPDKAIDLMDEAASRVRLTAFTAPPDLQSLEEKIEALKSEKEAA 438
Query: 448 VRGQDFEKAGELRDREMDLKAQISAL---VDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
V Q+FEKA + RD E L+ +++ L + +++S+++ A DI IV+
Sbjct: 439 VSSQEFEKAAKFRDEEHKLREELAQLRNSWESKRDVSESQVVAD---------DIAQIVA 489
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+WTGIPV+K++ +ES+RLL++E+TLH+RV+GQ++AVKA+SRA+RRAR GLK+P RP+ SF
Sbjct: 490 SWTGIPVKKLAQEESERLLRLEDTLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGSF 549
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF GPTGVGK+ELA+ALA FG E+A++R+DMSE+ME+H VS+L+G+PPGY+G+ EGGQ
Sbjct: 550 IFLGPTGVGKTELARALAEALFGEEDALVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQ 609
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTEA+RR+PY+V+L DEIEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+N ++IMTSNVG
Sbjct: 610 LTEAIRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSNVG 669
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+S+++K +GF DE + Y + + V E+LK+ FRPEFLNR+DE +VF L
Sbjct: 670 ASMMKKEA--MGFANRRDET-TEYKNMSARVMEDLKKTFRPEFLNRVDETVVFHSLQSEG 726
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I +I++K+V RLK +D +LQV + E + +EG +P+YGARPLRRAI RL+ED ++
Sbjct: 727 LLKITEILMKQVSTRLKEQDYDLQVEKSALELIAKEGNDPTYGARPLRRAIQRLIEDGLS 786
Query: 805 EKMLAREIKEGDSVIVDVDSD 825
EK+L E K GD + V + D
Sbjct: 787 EKILLGEFKPGDKIKVTAEED 807
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M E+FTEKA+K + LA +EA+R+G N IG+EHLLLGL+ EGEG+AA+ L +G P IR
Sbjct: 1 MNEKFTEKALKALQLAADEAQRMGSNVIGTEHLLLGLVDEGEGIAAKSLLGIGVTPEKIR 60
Query: 151 TQVIRMVG 158
Q+ + G
Sbjct: 61 EQIGNLTG 68
>gi|440753865|ref|ZP_20933067.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|440174071|gb|ELP53440.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
Length = 795
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/764 (56%), Positives = 556/764 (72%), Gaps = 56/764 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGSGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITADP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPT-----LEEYGTN 186
E +AA++L G D +R +++ GE A G G + ++ T L +YG N
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLLKNAGEKV-ASGRLTGDSNYKDQKNTPQGGILAQYGRN 175
Query: 187 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 246
L++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLAQRI SGD
Sbjct: 176 LSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLAQRIHSGD 235
Query: 247 VPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 306
+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GAG+
Sbjct: 236 IPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIHTLVGAGS 295
Query: 307 AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 366
GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++ I+
Sbjct: 296 MGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQAIE 355
Query: 367 ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 426
IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 356 ILRGLKATYEDFHQVKYAQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQ 415
Query: 427 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 486
+ E+ +E I E +L+
Sbjct: 416 SKSPAEVSEESPLINPE----------------------------SLI------------ 435
Query: 487 AGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRA 546
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+SRA
Sbjct: 436 -----PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEAVNAVSRA 490
Query: 547 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 606
IRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME HTV
Sbjct: 491 IRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHTV 550
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
SKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDGRLTDS+
Sbjct: 551 SKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSQ 610
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 726
GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VTEELKQYFRPE
Sbjct: 611 GRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTEELKQYFRPE 670
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+ EGY+PSY
Sbjct: 671 FLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDPSY 730
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA+ R LEDS+AE ML+ ++ GD I+DV +DG VTV
Sbjct: 731 GARPLRRALTRRLEDSLAEAMLSGKVNSGDHAILDVTADGVVTV 774
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDL 52
>gi|379734094|ref|YP_005327599.1| putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
gi|378781900|emb|CCG01552.1| Putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
Length = 842
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/734 (57%), Positives = 563/734 (76%), Gaps = 16/734 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ A GG + G +L +++G NLT+ A + KLDPV+GR +IERV+Q+
Sbjct: 140 QLLSGYQGKEPAAAGGPAEGTPSTSLVLDQFGRNLTQAARDQKLDPVIGRAKEIERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA EGLAQ I G+VP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAAVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH+EKD ALERRFQP++V EP++ T++ILKGLR+RYE HH++ TD ALV+AA
Sbjct: 320 TLDEYRKHLEKDAALERRFQPIQVSEPTLAHTVEILKGLRDRYEAHHRISITDSALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YISDRFLPDKAIDLIDEAG+R+R++ P + RE + ++ + +EK A+ QD
Sbjct: 380 TLADRYISDRFLPDKAIDLIDEAGARMRIKRMTAPPDLREFDDKIAAVRREKESAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGI 509
FEKA LRD E L + K + + +AGD+ VV EVD I +++ WTGI
Sbjct: 440 FEKAASLRDTEKQLLGE--------KAEREKQWKAGDMD-VVAEVDDEQIAEVLANWTGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +E+ RLL+ME+ LHKR+IGQ+EA+K++S+AIRR R GLK+P RP SFIF+GP
Sbjct: 491 PVFKLTEEETSRLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
+GVGK+ELAKALA + FG ++A+I++DM EF ++ TVS+L+G+PPGYVGY EGGQLTE V
Sbjct: 551 SGVGKTELAKALAQFLFGEDDALIQIDMGEFHDKFTVSRLVGAPPGYVGYDEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDEIEKAH DVFN +LQ+LEDGRLTD +GR VDFKNT+LI+T+N+G+ I
Sbjct: 611 RRKPFSVVLFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNTILILTTNLGTRDIS 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K +GF D + S+Y R+K V EELKQ+FRPEFLNR+D+++VF QLT+ E+ I
Sbjct: 671 K-AVGLGFQAGNDNQ-SNYERMKLKVNEELKQHFRPEFLNRIDDIVVFHQLTEDEIVHIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ML + +LK KD+ ++VT ++ + G++P GARPLRR I R +ED+++EK+L
Sbjct: 729 DLMLARLETQLKNKDMAIEVTPAAKKLLATRGFDPVLGARPLRRTIQREIEDALSEKILY 788
Query: 810 REIKEGDSVIVDVD 823
E+ G V+VDVD
Sbjct: 789 GELTSGQIVVVDVD 802
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|302527020|ref|ZP_07279362.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302435915|gb|EFL07731.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 831
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/737 (56%), Positives = 575/737 (78%), Gaps = 20/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ GE + G+G G G+ + + L+++G N+T LA EGKLDPV+GR +IERV
Sbjct: 140 QLLSGYQTGEKSTESGSGRGEGTPSSSL-VLDQFGRNMTVLAREGKLDPVIGRGKEIERV 198
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++
Sbjct: 199 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVPETLKDKQLYTLDLGSLVAGSR 258
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 259 YRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTI 318
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV
Sbjct: 319 GATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALV 378
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 379 AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAID 438
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFE+A LRD E L Q KG+ + + + GD+ VV EVD I +++ W
Sbjct: 439 AQDFERAARLRDEEKQLLGQ------KGER--EKQWKDGDL-DVVAEVDDEQIAEVLANW 489
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF
Sbjct: 490 TGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIF 549
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL+KALA++ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLT
Sbjct: 550 AGPSGVGKTELSKALASFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLT 609
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 610 EKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTS 669
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +GF D + Y ++K V EE+K++FRPEFLNR+D++IVF QL + ++
Sbjct: 670 DISK-SVSLGFSSGADSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLNQEQII 727
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+M+ V +LK KD+E+++TE+ + + + G++P GARPLRR I R +ED ++EK
Sbjct: 728 QMVDLMIGRVETQLKAKDMEIELTEKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEK 787
Query: 807 MLAREIKEGDSVIVDVD 823
+L E++ G ++VDV+
Sbjct: 788 ILFGEVEPGQIIVVDVE 804
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|89893184|ref|YP_516671.1| hypothetical protein DSY0438 [Desulfitobacterium hafniense Y51]
gi|219666457|ref|YP_002456892.1| ATPase AAA [Desulfitobacterium hafniense DCB-2]
gi|423073164|ref|ZP_17061907.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
gi|89332632|dbj|BAE82227.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536717|gb|ACL18456.1| ATPase AAA-2 domain protein [Desulfitobacterium hafniense DCB-2]
gi|361855994|gb|EHL07928.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
Length = 826
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/741 (58%), Positives = 570/741 (76%), Gaps = 22/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +V+ LA EEARR G +YIG+EHLLLGLL EGEGVAARVL NLG P I QV+
Sbjct: 79 LTPRVKRVMELAHEEARRHGVSYIGTEHLLLGLLMEGEGVAARVLRNLGVSPERIWKQVV 138
Query: 155 RMVGESTEAVGAG-------VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++G + + + P L E+G +LT+ A EG+LDPVVGR+ +IE
Sbjct: 139 QLLGGQPDDIPMPGGAPGPGTAKNNGAANTPALNEFGRDLTQQAREGRLDPVVGREDEIE 198
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RVVQ+L RRTKNNP LIGEPGVGKTAIAEGLAQRI + VP+T+ GK+V+TLD+ +VAG
Sbjct: 199 RVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINNKVPETLAGKRVVTLDLSAVVAG 258
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
+KYRGEFEERLKK+MEEI+ II+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQ
Sbjct: 259 SKYRGEFEERLKKVMEEIRVDGRIIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQ 318
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
CIGATTLDEYRK+IEKDPALERRFQP+ V EP+V++ +QIL GLR+RYE HH+ + TDEA
Sbjct: 319 CIGATTLDEYRKYIEKDPALERRFQPITVGEPTVEQAVQILLGLRDRYEAHHRTQITDEA 378
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ +A ++S +YISDRFLPDKAIDL+DEA SRVRL P + + LE+++ + EK A
Sbjct: 379 VEAAVKMSDRYISDRFLPDKAIDLMDEAASRVRLAAFTAPPDLKSLEEKIEALKSEKEAA 438
Query: 448 VRGQDFEKAGELRDREMDLK---AQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
V GQ+FEKA + RD E L+ AQ+ + +++S+++ VT DI IV+
Sbjct: 439 VLGQEFEKAAKFRDEEHQLREELAQLRNTWESKRDISQSQ---------VTADDIAQIVA 489
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+WTGIPV+K++ +ES+RLL +EETLH+RV+GQ++AVKA+SRA+RRAR GLK+P RP+ SF
Sbjct: 490 SWTGIPVKKLAQEESERLLGLEETLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGSF 549
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF GPTGVGK+ELA+ALA FG E+A+IR+DMSE+ME+H VS+L+G+PPGY+G+ EGGQ
Sbjct: 550 IFLGPTGVGKTELARALAEALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQ 609
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTEA+RR+PY+V+L DEIEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+N ++IMTSNVG
Sbjct: 610 LTEAIRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNAVIIMTSNVG 669
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+S ++K +GF DE ++ Y + S V EELK+ FRPEFLNR+DE++VF L
Sbjct: 670 ASFMKKEA--LGFASRRDE-ETEYKNMSSRVMEELKKTFRPEFLNRVDEIVVFHSLQTEG 726
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I +I++K+V RL+ + +LQV + E + +EG +P++GARPLRRAI RL+EDS++
Sbjct: 727 LLKITEILMKQVNGRLQEQGYDLQVEKSALELIAKEGNDPTFGARPLRRAIQRLIEDSLS 786
Query: 805 EKMLAREIKEGDSVIVDVDSD 825
EK+L E K GD + V+ D
Sbjct: 787 EKILLGEFKSGDKIKVEAVED 807
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M E++TEKA+K + A +EA+R+G N IG+EHLLLGL+ EGEG+AA+ L +G P IR
Sbjct: 1 MNEKYTEKALKALQFASDEAKRMGSNVIGTEHLLLGLVAEGEGIAAKSLHGIGVTPEKIR 60
Query: 151 TQVIRMVG 158
Q+ + G
Sbjct: 61 EQIGNLTG 68
>gi|452958959|gb|EME64301.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
decaplanina DSM 44594]
Length = 852
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/767 (55%), Positives = 577/767 (75%), Gaps = 24/767 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMVG------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ ESTE G+G G G+ + + L+++G NLT A EGKLDPV+GR +IER
Sbjct: 140 QLLSGYQGGKESTE-TGSGRGEGTPSSSL-VLDQFGRNLTVQAREGKLDPVIGRGKEIER 197
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 198 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGS 257
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 258 RYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQT 317
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 318 IGATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGAL 377
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 378 VQAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAI 437
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
QDFE+A LRD E L Q KG+ + + DV V E I +++ WTG
Sbjct: 438 DAQDFERAARLRDEEKTLLGQ------KGEREKQWKDGDLDVVAEVDEEQIAEVLANWTG 491
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 492 IPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAG 551
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALAA+ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 552 PSGVGKTELSKALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEK 611
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I
Sbjct: 612 VRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDI 671
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF D + Y ++K V EE+K++FRPEFLNR+D++IVF QLTK ++ E+
Sbjct: 672 SK-SVSLGFSSGGDSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTKEQIIEM 729
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ V +LK KD+EL++T + + + + G++P GARPLRR I R +ED ++EK+L
Sbjct: 730 VDLMIARVETQLKAKDMELELTPKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKIL 789
Query: 809 AREIKEGDSVIVDVDS--------DGNVTVLNGSSGAPESLADPLPV 847
E++ G ++VDV+ D + P S+ D PV
Sbjct: 790 FGEVQPGQIILVDVEGWNDEEGEKDDKAHFVFRGEARPSSVPDAPPV 836
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|444306034|ref|ZP_21141807.1| ATPase [Arthrobacter sp. SJCon]
gi|443481608|gb|ELT44530.1| ATPase [Arthrobacter sp. SJCon]
Length = 809
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/759 (57%), Positives = 572/759 (75%), Gaps = 13/759 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP---TLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ + E GAGVG G L+++G NLT+ A E KLDPV+GR+ ++ERV
Sbjct: 119 QLLSGYQGKETTGAGVGSGQPEGAPAGSVVLDQFGRNLTQAARENKLDPVIGREQEMERV 178
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ TLD+G LVAG++
Sbjct: 179 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIKDKQLYTLDLGSLVAGSR 238
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 239 YRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTI 298
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKHIEKD ALERRFQP++V EPSV I+ILKGLR+RYE HH++ TD AL
Sbjct: 299 GATTLDEYRKHIEKDAALERRFQPIQVKEPSVAHAIEILKGLRDRYEAHHRVTITDGALA 358
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P E + +++ + ++ EK A+
Sbjct: 359 SAASLAERYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKAMDERIAKLKMEKESAID 418
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
QDFE A LRD+E + A+ + KE D+ V ++ I +++ TGI
Sbjct: 419 AQDFEGAASLRDKEQKMIAERAE-----KERHWKSGGMDDISEVDEDL-IAEVLANSTGI 472
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K++ +ES RLLKMEE LHKRV+GQDEA+KA+S+AIRR R GLK+P RP SFIF+GP
Sbjct: 473 PVFKLTEEESSRLLKMEEELHKRVVGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGP 532
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTE V
Sbjct: 533 TGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKV 592
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 593 RRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDIS 652
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K GF D + + YNR+++ VTEELKQ+FRPEFLNR+D+++VF QLT+ E+ EI
Sbjct: 653 K-SVATGFQSGTDTQ-TGYNRMRARVTEELKQHFRPEFLNRVDDVVVFPQLTQDEIIEIV 710
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ + + RLK KD+ +++T+ + + GY+P+ GARPLRR I R +ED ++EK+L
Sbjct: 711 DLFVTRLEKRLKDKDMGIELTKAAKVLLATRGYDPAMGARPLRRTIQREIEDQLSEKILF 770
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
+I GD V+VDV+ +G+ + A + + P V
Sbjct: 771 GDIHPGDIVVVDVEGEGDDAKFTFAGNAKPRIPEIAPSV 809
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQQA 52
>gi|302870292|ref|YP_003838929.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|315503432|ref|YP_004082319.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|302573151|gb|ADL49353.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
gi|315410051|gb|ADU08168.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 845
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/764 (57%), Positives = 589/764 (77%), Gaps = 25/764 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A GA G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKEPAAAGAAPGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+
Sbjct: 379 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A +LRD E L Q K + E +AGD+ VV+EVD I ++ WT
Sbjct: 439 QDFERAAQLRDTEKQLLGQ--------KAQREKEWKAGDLD-VVSEVDDEQIAEVLGNWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+
Sbjct: 610 KVRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL +LE+
Sbjct: 670 VAK-AVSLGFQASED-SESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQLEILS 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DIM+ + +L+ KD+ L++T+ ++ + ++G++P GARPLRR I R +ED+++E++
Sbjct: 728 IVDIMIARIETQLRNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERI 787
Query: 808 LAREIKEGDSVIVDV-----DSDGNVTVLNGSSGAPESLADPLP 846
L E+ G V+VD D D + V G+ P+++ D +P
Sbjct: 788 LFNELTPGQIVVVDCEGDPEDIDKSKLVFRGAD-RPDAVPDAVP 830
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|384567728|ref|ZP_10014832.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora glauca K62]
gi|384523582|gb|EIF00778.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora glauca K62]
Length = 850
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/736 (57%), Positives = 571/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GAG G G+ + + L+++G NLT A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTASAREGKLDPVIGRSKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ ++ +EK A+
Sbjct: 379 AATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEVRREKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q S + K+ GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKTLLGQKSEREKQWKD--------GDLD-VVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ +
Sbjct: 670 ISK-SVSLGFSSGSDET-GRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V ++LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMVSRVEEQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G +IVDV+
Sbjct: 788 LFGEVQPGQIIIVDVE 803
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|451339451|ref|ZP_21909968.1| ATP-dependent Clp protease [Amycolatopsis azurea DSM 43854]
gi|449417946|gb|EMD23570.1| ATP-dependent Clp protease [Amycolatopsis azurea DSM 43854]
Length = 852
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/767 (55%), Positives = 577/767 (75%), Gaps = 24/767 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMVG------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ ESTE G+G G G+ + + L+++G NLT A EGKLDPV+GR +IER
Sbjct: 140 QLLSGYQGGKESTE-TGSGRGEGTPSSSL-VLDQFGRNLTVQAREGKLDPVIGRGKEIER 197
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 198 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGS 257
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 258 RYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQT 317
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 318 IGATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGAL 377
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 378 VQAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAI 437
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
QDFE+A LRD E L Q KG+ + + DV V E I +++ WTG
Sbjct: 438 DAQDFERAARLRDEEKTLLGQ------KGEREKQWKDGDLDVVAEVDEEQIAEVLANWTG 491
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+G
Sbjct: 492 IPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAG 551
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
P+GVGK+EL+KALAA+ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 552 PSGVGKTELSKALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEK 611
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S I
Sbjct: 612 VRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDI 671
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF D + Y ++K V EE+K++FRPEFLNR+D++IVF QLTK ++ E+
Sbjct: 672 SK-SVSLGFSSGGDSTN-RYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTKEQIIEM 729
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ V +LK KD+EL++T + + + + G++P GARPLRR I R +ED ++EK+L
Sbjct: 730 VDLMIARVETQLKAKDMELELTPKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKIL 789
Query: 809 AREIKEGDSVIVDVDS--------DGNVTVLNGSSGAPESLADPLPV 847
E++ G ++VDV+ D + P S+ D PV
Sbjct: 790 FGEVQAGQIILVDVEGWNDEEGEKDDKAHFVFRGEARPSSVPDAPPV 836
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|300790533|ref|YP_003770824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei U32]
gi|384154066|ref|YP_005536882.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|399542411|ref|YP_006555073.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|299800047|gb|ADJ50422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei U32]
gi|340532220|gb|AEK47425.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|398323181|gb|AFO82128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
Length = 831
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/758 (56%), Positives = 582/758 (76%), Gaps = 31/758 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 118
Query: 155 RMVG------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ ESTE G+G G G+ + + L+++G N+T LA EGKLDPV+GR +IER
Sbjct: 119 QLLSGYQGGKESTE-TGSGRGEGTPSSSL-VLDQFGRNMTVLAREGKLDPVIGRGKEIER 176
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 177 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVPETLKDKQLYTLDLGSLVAGS 236
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 237 RYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQT 296
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 297 IGATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSAL 356
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 357 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIANVRRDKESAI 416
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFE+A LRD E L Q KG+ + + + GD+ VV EVD I +++
Sbjct: 417 DAQDFERAARLRDEEKTLLGQ------KGER--EKQWKDGDL-DVVAEVDDEQIAEVLAN 467
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 468 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFI 527
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALAA+ FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQL
Sbjct: 528 FAGPSGVGKTELSKALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQL 587
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 588 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 647
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF ++ + Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 648 SDISK-SVSLGF-AGSNDTGTRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQI 705
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +L+ KD+EL++T + + + + G++P GARPLRR I R +ED ++E
Sbjct: 706 IMMVDLMIGRVETQLRAKDMELELTAKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 765
Query: 806 KMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLAD 843
K+L E++ G ++VDV+ G SG PE D
Sbjct: 766 KILFGEVEPGQIILVDVE---------GWSGNPEDKDD 794
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQQA 52
>gi|424827469|ref|ZP_18252273.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
gi|365980083|gb|EHN16120.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
Length = 811
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/733 (57%), Positives = 574/733 (78%), Gaps = 11/733 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D ++ ++I
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDVERLKKELI 140
Query: 155 R-MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+ + GE E + +S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLSGE--EMLKDEGSKKTSKSSTPTLDQFGRDLTEMAEEGKIDPVIGRDKETQRVLEIL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNPCLIGEPGVGKTAIAEGLAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGE
Sbjct: 199 CRRTKNNPCLIGEPGVGKTAIAEGLAQNIINGNIPEILKNKRVVTLDLTSMIAGAKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATT
Sbjct: 259 FEDRLKKIMEEVRNSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A
Sbjct: 319 LDEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVN 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI DRFLPDKAIDLIDEAGS+VR+ + P + + +E++L ++ KEK +A+R QDF
Sbjct: 379 LSDRYIRDRFLPDKAIDLIDEAGSKVRIENLIAPPDLKNIEEQLDKVVKEKEDAIRVQDF 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K
Sbjct: 439 EKAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIASVVSKWTNIPVNK 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES+RLLK+E+ LH RVIGQ+EA+K++S+++RRARVGLK+P RPI SFIF GPTGVG
Sbjct: 493 LTEKESERLLKLEDILHNRVIGQEEAIKSVSKSVRRARVGLKDPKRPIGSFIFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLTE VR P
Sbjct: 553 KTELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTEKVRTNP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 613 YSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QK 671
Query: 694 RIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + +KEI +M
Sbjct: 672 TLGFNTSIEEERETEYEKMKDNIMHELKHSFRPEFLNRIDDIIVFHQLREEHIKEIVKLM 731
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
LK V +R++ + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L I
Sbjct: 732 LKIVSNRVEDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNI 791
Query: 813 KEGDSVIVDVDSD 825
K+GDSV V+ D
Sbjct: 792 KKGDSVKVNTIED 804
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA ++L N G +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKQLLNNSGITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|443671357|ref|ZP_21136469.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
sp. AW25M09]
gi|443416090|emb|CCQ14806.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
sp. AW25M09]
Length = 825
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/738 (57%), Positives = 566/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ G+G G + + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 119 QLLSGYQGKEPSESGSGRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVM 178
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 179 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 238
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 239 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 298
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 299 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVA 358
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 359 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 418
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L Q + + + +GD+ VV EVD I ++ WT
Sbjct: 419 QDFEKAANLRDKEKTLVGQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGNWT 469
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ EAVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 470 GIPVFKLTEEETTRLLRMEDELHKRIIGQVEAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 529
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 530 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 589
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++
Sbjct: 590 KVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTAD 649
Query: 688 IEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +G E S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT+ E+
Sbjct: 650 ISKA---VGLGFSSGEGTGSNYERMKLKVNDELKKHFRPEFLNRIDDIVVFHQLTRDEII 706
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+ML V LK KD+ ++VTE+ + + + G++P GARPLRR I R +ED+++EK
Sbjct: 707 QMVDLMLNRVEGALKNKDMAIEVTEKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSEK 766
Query: 807 MLAREIKEGDSVIVDVDS 824
+L EI+ G ++VDV++
Sbjct: 767 ILFGEIEAGQIILVDVEN 784
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|317123796|ref|YP_004097908.1| ATPase AAA [Intrasporangium calvum DSM 43043]
gi|315587884|gb|ADU47181.1| ATPase AAA-2 domain protein [Intrasporangium calvum DSM 43043]
Length = 874
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/746 (56%), Positives = 574/746 (76%), Gaps = 26/746 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGH+YIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLEYSLREALQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGAELNKVRQQVI 139
Query: 155 RMVGEST------EAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQP 204
+++ E GAGVG ++G P L+++G NLT+ A EGKLDPV+GR+
Sbjct: 140 QLLSGYQGQGGQGEKTGAGVGQ-ATGEGTPAGSLVLDQFGRNLTQAAREGKLDPVIGREK 198
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G L
Sbjct: 199 EIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVKGEVPETLKDKQLYTLDLGSL 258
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 259 VAGSRYRGDFEERLKKVLKEIRTRGDIIIFIDEIHTLVGAGAAEGAIDAASILKPMLARG 318
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EP++ TI+ILKGLR+RYE HH++ T
Sbjct: 319 ELQTIGATTLDEYRKHIEKDSALERRFQPIQVQEPTLPHTIEILKGLRDRYEAHHRVTIT 378
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D ALV+AA ++ +Y++DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK
Sbjct: 379 DGALVAAANMADRYVNDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAHLVREK 438
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQH 501
A+ GQDFE+A +RD E L+A+ K +A+ ++GD+ VV EVD I
Sbjct: 439 ESAIDGQDFERAARVRDEEKKLRAE--------KAEREAQWKSGDMD-VVAEVDEELIAE 489
Query: 502 IVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPI 561
+++A TGIPV K++ +ES RLL ME+ LHKR++G ++AVKA+S+AIRR R GLK+P RP
Sbjct: 490 VLAASTGIPVFKLTEEESSRLLHMEDELHKRIVGMNDAVKALSQAIRRTRAGLKDPRRPG 549
Query: 562 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 621
SFIF+GPTGVGK+ELAK LA + FGSE+A+I+LDMSEF E+HTVS+L GSPPGYVGY E
Sbjct: 550 GSFIFAGPTGVGKTELAKTLAEFLFGSEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEE 609
Query: 622 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 681
GGQLTE VRR+P++VVLFDE+EKAHP++FN +LQ+LEDGRLTDS+GR VDFKNT++IMT+
Sbjct: 610 GGQLTEKVRRKPFSVVLFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRMVDFKNTVIIMTT 669
Query: 682 NVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLT 741
N+G+ I K +GF D + S Y R+K+ V +ELKQ+FRPEFLNR+D+ IVF L+
Sbjct: 670 NLGTRDISKAS--MGFSAGPDTR-SDYERMKAKVIDELKQHFRPEFLNRVDDTIVFPHLS 726
Query: 742 KLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 801
+ E+ +I D+ + ++ RLK KD+ + +T+ ++ + ++GY+ GARPLRR I R +ED
Sbjct: 727 RDEIIQIVDLEIAKLDKRLKDKDMGIDLTQAAKDLLAKKGYDHVLGARPLRRTIQREIED 786
Query: 802 SMAEKMLAREIKEGDSVIVDVDSDGN 827
+++EK+L E G + VD + +G
Sbjct: 787 ALSEKILYAEFTSGQYIKVDTEGEGK 812
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 AQVQEIIGQGQQA 73
>gi|433457230|ref|ZP_20415238.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
gi|432195128|gb|ELK51687.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
Length = 812
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/757 (57%), Positives = 579/757 (76%), Gaps = 24/757 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVA +VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVATQVLVKLGADLNRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E V AG G P L+++G NLT+ A E KLDPV+GR+ ++ER
Sbjct: 119 QLLSGYQGKEPVSAG---GQQQEGAPAGSVVLDQFGRNLTQAARESKLDPVIGREHEMER 175
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI K++ TLD+G LVAG+
Sbjct: 176 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETIRDKQLYTLDLGSLVAGS 235
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 236 RYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQT 295
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRKHIEKD ALERRFQP++V EPSVD +QILKGLR+RYE HH++ TD AL
Sbjct: 296 IGATTLDEYRKHIEKDAALERRFQPIQVNEPSVDHAVQILKGLRDRYEAHHRVSITDGAL 355
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+++YISDRFLPDKAIDLIDEAG+R+R+R P E +E+++++ ++ K+K A+
Sbjct: 356 DAAAHLAHRYISDRFLPDKAIDLIDEAGARLRIRRMTAPPELKEIDEKIAELKKQKESAI 415
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFE A LRD+E L+ + +A KE + ++GD+ + EVD I +++
Sbjct: 416 DAQDFEGAASLRDKESKLQNERAA-----KERA---WKSGDLDE-IAEVDEDLIAEVLAN 466
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ +ES RL+ ME LHKRVIGQDEA+KAIS+AIRR R GLK+PNRP SFI
Sbjct: 467 STGIPVFKLTEEESSRLMHMEAELHKRVIGQDEAIKAISQAIRRTRAGLKDPNRPSGSFI 526
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQL
Sbjct: 527 FAGPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQL 586
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 587 TEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGT 646
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D K + Y R+++ V +ELKQ+FRPEFLNR+D+ +VF QLT+ E+
Sbjct: 647 RDISK-GVMTGFQSGTDTK-TGYERMRARVQDELKQHFRPEFLNRVDDTVVFPQLTEEEI 704
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+I D+ + + RL K++++ +T + + GY+P+ GARPLRR I R +ED ++E
Sbjct: 705 VQIVDLFVTRLQKRLAEKNMKIDLTPAAKVLLANRGYDPTMGARPLRRTIQREVEDQLSE 764
Query: 806 KMLAREIKEGDSVIVDVDSDGNVT-VLNGSSGAPESL 841
K+L EI+ G+++ VDVD +G+ ++ ++G P+++
Sbjct: 765 KILFGEIQPGETIHVDVDGEGDAAKLVFTTTGTPKAI 801
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE LG + +R QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALEFLGVSLNGVREQVQEIIGQGQQA 52
>gi|168181833|ref|ZP_02616497.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|237796972|ref|YP_002864524.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Ba4 str. 657]
gi|182674884|gb|EDT86845.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|229263581|gb|ACQ54614.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum Ba4 str. 657]
Length = 811
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/732 (57%), Positives = 571/732 (78%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D +R ++I
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLRKELI 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ + G S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLSGQETPKDEGSKKSSK-SSTPTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILC 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQNIINGNIPEILKNKRVVTLDLTSMIAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 260 EDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A L
Sbjct: 320 DEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDL+DEAGS+VR+++ P + + +E++L ++ KEK +A+R QDFE
Sbjct: 380 SDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K+
Sbjct: 440 KAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E+ LH RVIGQ+EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 TEKESERLLKLEDILHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY
Sbjct: 554 TELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 614 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKT 672
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + ++EI +ML
Sbjct: 673 LGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +R+K + IEL+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L IK
Sbjct: 733 KTVSNRVKDQGIELEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIK 792
Query: 814 EGDSVIVDVDSD 825
+GDSV V+ D
Sbjct: 793 KGDSVKVNTIED 804
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA +L N +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|22255857|gb|AAM94782.1| CalR4 [Micromonospora echinospora]
Length = 797
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/764 (57%), Positives = 587/764 (76%), Gaps = 27/764 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 42 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 101
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A GA G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 102 QLLSGYQGKEPAAAGAAAGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVM 160
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 161 QVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIKGEVPETLKDKQLYTLDLGALVAGSRY 220
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 221 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 280
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 281 ATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVA 340
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+
Sbjct: 341 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDA 400
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A +LRD+E L Q K + E +AGD+ VV+EVD I ++ WT
Sbjct: 401 QDFERAAQLRDKEKQLLGQ--------KAQREKEWKAGDLD-VVSEVDDEQIAEVLGNWT 451
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 452 GIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 511
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 512 GPSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTE 571
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+
Sbjct: 572 KVRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRD 631
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+
Sbjct: 632 VAK-AVSLGFQASED-SESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRENEILS 689
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DIM+ + +L+ KD+ L++T+ ++ + ++G++P GARPLRR I R +ED+++E++
Sbjct: 690 IVDIMIARIETQLRNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERI 749
Query: 808 LAREIKEGDSVIVDVDSDGNVT-----VLNGSSGAPESLADPLP 846
L E+ G V+VD + D + T V G+ P P+P
Sbjct: 750 LFNELTPGQIVVVDCEGDPSNTAKSKLVFRGADKPPTG---PVP 790
>gi|339626578|ref|YP_004718221.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|379006033|ref|YP_005255484.1| ATPase AAA-2 domain-containing protein [Sulfobacillus acidophilus
DSM 10332]
gi|339284367|gb|AEJ38478.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|361052295|gb|AEW03812.1| ATPase AAA-2 domain protein [Sulfobacillus acidophilus DSM 10332]
Length = 823
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/751 (57%), Positives = 569/751 (75%), Gaps = 15/751 (1%)
Query: 95 FTEKAIKVIM-LAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
FT +A KV++ LA EEAR L NYIG EHLLLGL+REGEGVAA+VL GAD + +R Q+
Sbjct: 81 FTPRAKKVVLELAGEEARALNQNYIGPEHLLLGLIREGEGVAAQVLLAAGADLNKVRHQL 140
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
I+ +G + PTL+ YG +LT++A EGKLDPV+GR + ERV+QIL
Sbjct: 141 IQ--ATGNTGGNSGGNEQQAQVNTPTLDLYGRDLTQMAREGKLDPVIGRDKEAERVIQIL 198
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTA+ EGLAQRI VP+ ++ ++V+ LD+G ++AG+KYRGE
Sbjct: 199 SRRTKNNPVLIGEPGVGKTAVVEGLAQRIVENKVPEILKDRRVVALDLGAMLAGSKYRGE 258
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLK+ M EI+++ +ILFIDE+HT++GAGAAEGAIDAANILKP+LARGELQ IGATT
Sbjct: 259 FEDRLKRAMNEIREAKNVILFIDEMHTIVGAGAAEGAIDAANILKPALARGELQAIGATT 318
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IE+DPALERRFQP+ V EPS +E +QILKGLR+RYE HH++ TD+A+ +A
Sbjct: 319 LDEYRKYIERDPALERRFQPIMVEEPSAEEAVQILKGLRDRYEAHHRVNITDDAIEAAVH 378
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +Y+SDRFLPDKAIDLIDEA SRVRL+ P + ++L +L +I KEK AV+ Q+F
Sbjct: 379 LSDRYVSDRFLPDKAIDLIDEAASRVRLKSYVAPPDLKDLADKLEEIRKEKEAAVQAQEF 438
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA ++RD E L+ ++ + + ET VT DI HIVS+WTGIPVE+
Sbjct: 439 EKAAQMRDEEQKLREELERQTHEWHNRQRVET------ITVTPDDIAHIVSSWTGIPVER 492
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++++ES+RLL +EE LH+RV+GQ+EAV+A+SRAIRRAR GLKNP RPI SF+F GPTGVG
Sbjct: 493 LASEESERLLNLEEELHRRVVGQEEAVRAVSRAIRRARAGLKNPRRPIGSFLFLGPTGVG 552
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
KSELAKALA FG E+AMI +DMSE+MERH VS+L+G+PPGYVGY EGGQLTEAVRR P
Sbjct: 553 KSELAKALAQALFGDEDAMITIDMSEYMERHAVSRLVGAPPGYVGYEEGGQLTEAVRRHP 612
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAHP+VFN++LQ+LE+GRLT++KGR VDF+NT++IMTSNVG+ VI++
Sbjct: 613 YSVVLLDEIEKAHPEVFNILLQVLEEGRLTEAKGRAVDFRNTVIIMTSNVGAEVIKRQA- 671
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
IGF D +E ++Y +K + +E+K FRPEF+NR+DE+IVF +L++ + EI IML
Sbjct: 672 TIGFRKDTEE--TAYRDMKDRLMDEVKHTFRPEFINRVDEIIVFHELSEKHLAEIVGIML 729
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
KEV DR+ L V++ + + +EG++P +GARPLRRAI L+ED +AE++LA +
Sbjct: 730 KEVEDRIGQNGYRLTVSDAAKAIIAKEGFDPVFGARPLRRAIQHLVEDELAEQILAGKFA 789
Query: 814 EGDSVIVDVDSDGNVT--VLNGSSGAPESLA 842
EG + VD + DG + + A ES+A
Sbjct: 790 EGAHIYVDAE-DGKLVFRTMTEHDSAMESIA 819
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF +FTEKA +V++ AQ+EARR+GHN++G+EHLLLGL+RE + A++L+++G D +R
Sbjct: 1 MFGQFTEKARRVVINAQDEARRMGHNFVGTEHLLLGLIRESNSLPAKILQSIGLDLETVR 60
Query: 151 TQVIRMVG 158
++V++ G
Sbjct: 61 SEVLKATG 68
>gi|312138070|ref|YP_004005406.1| DNA binding ATP-dependent peptidase [Rhodococcus equi 103S]
gi|311887409|emb|CBH46721.1| putative DNA binding ATP-dependent peptidase [Rhodococcus equi
103S]
Length = 851
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/736 (57%), Positives = 568/736 (77%), Gaps = 18/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E AG G +G +L +++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGGSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + +GD+ V+ EVD I ++ WT
Sbjct: 440 QDFEKAANLRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF +S+Y R+K V +ELK++FRPEFLNR+D++IVF QL++ E+ E
Sbjct: 671 ISK-AVGLGFSAGTG-SESNYERMKLKVHDELKKHFRPEFLNRIDDIIVFHQLSQNEIIE 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+++++TE+ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 729 MVDLMIGRVEAQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 788
Query: 808 LAREIKEGDSVIVDVD 823
L E+ G V+VDV+
Sbjct: 789 LFNELGPGQIVLVDVE 804
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|134097027|ref|YP_001102688.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133909650|emb|CAL99762.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 853
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/737 (57%), Positives = 571/737 (77%), Gaps = 22/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ E EA G G G SS L+++G NLT+ A E KLDPV+GR+ +IER+
Sbjct: 140 QLLSGYQGKEPAEAGGRGEGTPSSS---LVLDQFGRNLTQSARESKLDPVIGREKEIERI 196
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGE GVGKTA+ EGLAQ++ G+VP+T++ K++ TLD+G LVAG++
Sbjct: 197 MQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQKVVKGEVPETLKDKQLYTLDLGSLVAGSR 256
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 257 YRGDFEERLKKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTI 316
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTL+EYRK++EKDPALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV
Sbjct: 317 GATTLEEYRKYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDGALV 376
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 377 SAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAID 436
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFE+A LRD E L Q K+ + + +AGD+ VV EVD I +++ W
Sbjct: 437 AQDFERAARLRDEEKQLLGQ--------KDEREKQWKAGDL-DVVAEVDDEQIAEVLANW 487
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+ME+ LHKR+IGQD+AVKA+S+AIRR R GLK+P RP SFIF
Sbjct: 488 TGIPVFKLTEEETTRLLRMEDELHKRIIGQDDAVKAVSQAIRRTRAGLKDPKRPSGSFIF 547
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL+KALA + FG ++A++++DM EF +R+T S+L G+PPGYVGY EGGQLT
Sbjct: 548 AGPSGVGKTELSKALAEFLFGDDDALVQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLT 607
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 608 EKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQ 667
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +GF D +S+Y R+KS V EE+K++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 668 DISK-AVGLGFSAGTD-SESNYERMKSKVNEEMKKHFRPEFLNRIDDVIVFHQLTEAEII 725
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D++ V LK KD+ L++T ++ + + G++P GARPLRR I R +ED ++EK
Sbjct: 726 QMVDLLGARVEKALKGKDMSLELTTLAKKLLAKRGFDPVLGARPLRRTIQREIEDRLSEK 785
Query: 807 MLAREIKEGDSVIVDVD 823
+L EI+ G VIVDV+
Sbjct: 786 ILFGEIEPGQIVIVDVE 802
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|357019920|ref|ZP_09082155.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
gi|356479956|gb|EHI13089.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
Length = 831
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/739 (56%), Positives = 574/739 (77%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + EA AG GG + P+ L+++G NLT+ A EGKLDPV+GR+ ++ER
Sbjct: 119 QLLSGYQGKEAAEAGTGGRGGESGNPSTSLVLDQFGRNLTQAAAEGKLDPVIGREKEVER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
++Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG+
Sbjct: 179 IMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGEVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 359 VAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAETRREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + AGD+ VV EVD I ++
Sbjct: 419 DAQDFEKAAALRDQEKQLVAQ--------RAEREKQWRAGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AV+A+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVRAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG E+A+I++DM E+ +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALAEFLFGDEDALIQIDMGEYHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 650 SDISKA---VGLGFSQGGSENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQEQI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++LK KD++LQ+T++ ++ + + G++P GARPLRR I R +ED ++E
Sbjct: 707 IQMVDLMIDRVRNQLKAKDMDLQLTDKAKQLLAKRGFDPVLGARPLRRTIQREIEDQLSE 766
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E++ G + VDV++
Sbjct: 767 KILFEELRPGQLITVDVEN 785
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|407985354|ref|ZP_11165952.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
gi|407373047|gb|EKF22065.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
Length = 822
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/738 (57%), Positives = 574/738 (77%), Gaps = 21/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGDVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ T++ILKGLR+RYE HH++ TD+A+
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTVEILKGLRDRYEAHHRVSITDDAI 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 359 VAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I +++
Sbjct: 419 DAQDFEKAAALRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLAN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG E+A+I++DM E+ +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALAEFLFGDEDALIQIDMGEYHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 650 SDISKA---VGLGFSKGGGENDYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQEQI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++LK KD++L +TE+ ++ + + G++P GARPLRR I R +ED ++E
Sbjct: 707 IQMVDLMVGRVANQLKAKDMDLVLTEKAKKLLAQRGFDPVLGARPLRRTIQREIEDQLSE 766
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L E++ G V VDV+
Sbjct: 767 KILFEELRPGQLVTVDVE 784
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVRSQVEEIIGQGQQA 52
>gi|326383982|ref|ZP_08205665.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197142|gb|EGD54333.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 846
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/738 (58%), Positives = 569/738 (77%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG G SS P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPAEAGTGARSSEAGTPSTSLVLDQFGRNLTTAASEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E LV + E K + AGD+ VV EV+ I ++
Sbjct: 440 DAQDFEKAASLRDKE-------KQLVGERAEREK-QWRAGDL-DVVAEVNDEEIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ +AV A+SRAIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQQDAVAAVSRAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D D + S+Y+R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISK-AVGMGFSKD-DGRGSNYDRMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD++L++TE+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 729 IQMVDLMIGRVEAQLKNKDMDLELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L EIK G V++DV+
Sbjct: 789 KILFEEIKAGQIVVIDVE 806
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|325675027|ref|ZP_08154714.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|325554613|gb|EGD24288.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 851
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/736 (57%), Positives = 568/736 (77%), Gaps = 18/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E AG G +G +L +++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGGSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + +GD+ V+ EVD I ++ WT
Sbjct: 440 QDFEKAANLRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF +S+Y R+K V +ELK++FRPEFLNR+D++IVF QL++ E+ +
Sbjct: 671 ISK-AVGLGFSAGTG-SESNYERMKLKVHDELKKHFRPEFLNRIDDIIVFHQLSQNEIIQ 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+++++TE+ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 729 MVDLMIGRVEAQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 788
Query: 808 LAREIKEGDSVIVDVD 823
L E+ G V+VDV+
Sbjct: 789 LFNELGPGQIVLVDVE 804
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/759 (55%), Positives = 569/759 (74%), Gaps = 19/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGHNYIG+EH+LLG++R GEGVA++VL LGADP+ +R V+
Sbjct: 80 FTPRAKKVLEHSLREALQLGHNYIGTEHILLGIIRAGEGVASQVLVKLGADPAKVRATVL 139
Query: 155 RMV--------GESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G EA G G GG + G + L+++G NLT A E KLDPV+GR
Sbjct: 140 ELISGYQSGNAGGEKEAAGVGSGGRAEGTPAGSAVLDQFGRNLTAAARESKLDPVIGRYR 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G L
Sbjct: 200 EMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLKDKQLYTLDLGSL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EPS ++ILKGLR++YE HH++ +
Sbjct: 320 ELQTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSEAHAVEILKGLRDKYEAHHRVSIS 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEAL SA +S +Y+SDRFLPDKAIDLIDEAG+R+R++ P E + L++++ + K
Sbjct: 380 DEALESAVSMSARYVSDRFLPDKAIDLIDEAGARLRIKRMTAPPEIKALDEKIAETKTAK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
A+ GQD+EKA LRD E L A+ +K K + + + +V P V I ++S
Sbjct: 440 EAAIDGQDYEKAASLRDTEQKLIAERD---EKDKAWREGDDQISEVTPEV----ISDVLS 492
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
A TG+PV K+S +ES RLL ME+ LHKRVIGQ+EA+KA+SR+IRR R GLK+P RP SF
Sbjct: 493 ASTGVPVYKLSEEESGRLLHMEDELHKRVIGQNEAIKALSRSIRRTRAGLKDPRRPGGSF 552
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQ
Sbjct: 553 IFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYEEGGQ 612
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G
Sbjct: 613 LTEKVRRKPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLG 672
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I + +GF D +SY+R+++ V EELK++FRPEFLNR+DE+IVF QL++ E
Sbjct: 673 TRDISR-TVPVGFQASGDAA-TSYDRMQAKVQEELKEHFRPEFLNRVDEIIVFPQLSEAE 730
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+ + + RL+ +D+ + +T+ ++ V ++GY+P+ GARPLRR + R +ED ++
Sbjct: 731 IVQIVDLFVARLQQRLREQDMSITLTDEAKKLVAKKGYDPAMGARPLRRTMQREIEDQLS 790
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLAD 843
E++L EI G+ + V V+ +G+ SS L+D
Sbjct: 791 ERILFGEIASGEKITVGVEGEGDDATFTFSSTPMSELSD 829
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEGVAA+ LE++G S R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGVAAKALESMGVTLSAAR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G +A
Sbjct: 61 EQVQDIIGPGQQA 73
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/758 (57%), Positives = 574/758 (75%), Gaps = 20/758 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGLLREGEG A +VL L A+PS +R +VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLLREGEGTAVKVLSRLKAEPSAVRQEVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+ A GG S G +L +++G NLT+ A EGKLDPV+GR+ + ERV+Q+
Sbjct: 140 ERLSGYQGKEPATAGGPSEGQPSGSLVLDQFGRNLTQAAREGKLDPVIGRELEAERVMQV 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGK+A+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKSAVVEGLAQSIVAGDVPETLKDKQLYTLDLGSLVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TL+EYRKHIEKD ALERRFQP++V +PSV T++ILKGLR+RYE HHK+ TD ALV+AA
Sbjct: 320 TLEEYRKHIEKDAALERRFQPIQVDQPSVAHTVEILKGLRDRYEAHHKVTITDAALVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +Y++DRFLPDKAIDLIDEAG+R+R+R P E +E + + + ++K EA+ GQD
Sbjct: 380 NLADRYVNDRFLPDKAIDLIDEAGARLRIRRLTAPPELKEFDTRIEETRRKKEEAIDGQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FE A LRD E LK++ KE + E+ V V EV I +++A TGIP+
Sbjct: 440 FELAASLRDEEQKLKSERDE-----KETAWRHGESDAVTTVSEEV-IAEVLAASTGIPIV 493
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +ES RLL ME+ LHKRVIGQDEA+KAISRAIRR R GLK+P RP SFIF+GPTGV
Sbjct: 494 KLTEEESSRLLNMEQELHKRVIGQDEAIKAISRAIRRTRAGLKDPKRPGGSFIFAGPTGV 553
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELAKALA + FG EE++I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE VRR+
Sbjct: 554 GKTELAKALAEFLFGDEESLIQLDMSEFGEKHTASRLFGSPPGYVGYDEGGQLTEKVRRK 613
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG- 691
P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I KG
Sbjct: 614 PFSVVLFDEVEKAHVDIFNSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDIAKGV 673
Query: 692 --GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
G G L D Y R+KS V EELKQ+F+PEFLNR+D+++VF QL+K E+ EI
Sbjct: 674 SIGFTAGGGLSTD-----YERMKSKVHEELKQHFKPEFLNRVDDVVVFPQLSKEEIVEIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ + ++ RL+ +D+ L ++ +E V E+GY+P GARPLRR I R +ED+++E++L
Sbjct: 729 DLEIAKLETRLRDRDMSLTLSSEAKELVAEKGYDPVLGARPLRRTIQRDIEDTLSERILF 788
Query: 810 REIKEGDSVIVDVDSDGNVTVLN----GSSGAPESLAD 843
+++ GD ++VD + +G + L+ G G E++++
Sbjct: 789 GQVQVGDEIVVDAEGEGLLGELSFSRRGEDGTLEAISE 826
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EH+LLGL+ E EGV A+ LE LG +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARLLNHNYIGTEHILLGLIHENEGVGAKALEALGVTLDAVR 60
Query: 151 TQVIRMVGESTE 162
QV ++GE +
Sbjct: 61 EQVRDIIGEGNQ 72
>gi|256374490|ref|YP_003098150.1| ATPase AAA [Actinosynnema mirum DSM 43827]
gi|255918793|gb|ACU34304.1| ATPase AAA-2 domain protein [Actinosynnema mirum DSM 43827]
Length = 852
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/738 (57%), Positives = 571/738 (77%), Gaps = 23/738 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMVG------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E EA G G G SS L+++G NLT +A EGKLDPV+GR +IER
Sbjct: 140 QLLSGYSGGKEPAEAGGRGEGTPSSS---LVLDQFGRNLTSMAREGKLDPVIGRAKEIER 196
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ + G+VP+T++ K++ TLD+ LVAG+
Sbjct: 197 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQMVVKGEVPETLKDKQLYTLDLSSLVAGS 256
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 257 RYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQT 316
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK++EKDPALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 317 IGATTLDEYRKYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSAL 376
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 377 VAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAI 436
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFE+A +LRD+E L Q K + + + GD+ VV EVD I +++
Sbjct: 437 DAQDFERAAKLRDQEKTLLGQ--------KAEREKQWKDGDL-DVVAEVDEEQIAEVLAN 487
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ EAVKA+S+AIRR R GLK+P RP SFI
Sbjct: 488 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQVEAVKAVSQAIRRTRAGLKDPKRPAGSFI 547
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQL
Sbjct: 548 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQL 607
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +V+N +LQ+LEDGRLTD +GRTVDFKNT++I TSN+G+
Sbjct: 608 TEKVRRKPFSVVLFDEIEKAHNEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNLGT 667
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +GF D S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 668 SDISK-AVGLGFASGQDNA-SNYERMKNKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 725
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+++ V +LK KD+ +++TE+ ++ + + G++P GARPLRR I R +ED ++E
Sbjct: 726 IRMVDLLIARVETQLKNKDMAIELTEKAKQLLAKRGFDPVLGARPLRRTIQREIEDQLSE 785
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L E++ G VI DV+
Sbjct: 786 KILFGELQPGQIVITDVE 803
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|443662998|ref|ZP_21133044.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159028807|emb|CAO89978.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332002|gb|ELS46635.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 795
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/764 (56%), Positives = 556/764 (72%), Gaps = 56/764 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGSGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITADP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPT-----LEEYGTN 186
E +AA++L G D +R +++ GE A G G + ++ T L +YG N
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLLKNAGEKV-ASGRLTGDSNYKDQKNTPQGGILAQYGRN 175
Query: 187 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 246
L++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLAQRI SGD
Sbjct: 176 LSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLAQRIHSGD 235
Query: 247 VPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 306
+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GAG+
Sbjct: 236 IPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGSIILFIDEIHTLVGAGS 295
Query: 307 AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 366
GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++ I+
Sbjct: 296 MGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQAIE 355
Query: 367 ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 426
IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 356 ILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQ 415
Query: 427 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 486
+ E+ +E I E +L+
Sbjct: 416 SKSPAEVSEESPLINPE----------------------------SLI------------ 435
Query: 487 AGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRA 546
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+SRA
Sbjct: 436 -----PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLESQLHERIIGQQEAVNAVSRA 490
Query: 547 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 606
IRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME HTV
Sbjct: 491 IRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHTV 550
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
SKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDGRLTDS+
Sbjct: 551 SKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSQ 610
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 726
GR VDFKNTL+IMTSN+GS VIEKGG+ +GF++ D S Y +I + VTEELKQYFRPE
Sbjct: 611 GRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEMADDFAQSRYQQISNRVTEELKQYFRPE 670
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+ EGY+PSY
Sbjct: 671 FLNRLDEIIVFRQLTREEVTQIADILIADIAKQLTEKGISVEVTAAFKDLVINEGYDPSY 730
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA+ R LEDS+A ML+ ++ GD ++DV +DG VTV
Sbjct: 731 GARPLRRALTRRLEDSLAVAMLSGKVNSGDHALLDVTADGVVTV 774
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDL 52
>gi|363419559|ref|ZP_09307659.1| DNA binding ATP-dependent peptidase [Rhodococcus pyridinivorans
AK37]
gi|359737034|gb|EHK85969.1| DNA binding ATP-dependent peptidase [Rhodococcus pyridinivorans
AK37]
Length = 847
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/736 (57%), Positives = 570/736 (77%), Gaps = 18/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E +G G +G +L +++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAESGTSRGETGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD+ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDKALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
+A L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 SATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + AGD+ V+ EVD I +++ WT
Sbjct: 440 QDFEKAASLRDKEKQLVAQ--------RAEREKQWRAGDL-DVIAEVDEEQIAEVLANWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPSGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTAD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF E S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ ++ +
Sbjct: 671 ISK-AVGLGFSAGTGEA-SNYERMKNKVHDELKKHFRPEFLNRIDDIIVFHQLTQDQIIQ 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+ +++TE+ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 729 MVDLMVGRVETQLKNKDMGIELTEKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 788
Query: 808 LAREIKEGDSVIVDVD 823
L EI G V+VDV+
Sbjct: 789 LFGEIGAGQIVLVDVE 804
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|381163390|ref|ZP_09872620.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea NA-128]
gi|418462066|ref|ZP_13033124.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea SZMC 14600]
gi|359737814|gb|EHK86734.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea SZMC 14600]
gi|379255295|gb|EHY89221.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea NA-128]
Length = 849
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/736 (57%), Positives = 568/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GAG G G+ + + L+++G NLT A E KLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAARENKLDPVIGRNKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 379 AATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q S + K+ GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ +
Sbjct: 670 ISK-SVSLGFSSGSDET-GRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M V ++LK KD+ L++T+R + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMASRVEEQLKAKDMALELTDRAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G +IVDV+
Sbjct: 788 LFGEVQAGQIIIVDVE 803
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|118472509|ref|YP_890312.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399990311|ref|YP_006570661.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
gi|118173796|gb|ABK74692.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399234873|gb|AFP42366.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
Length = 848
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/738 (57%), Positives = 569/738 (77%), Gaps = 21/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + EA AG GG + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAAALRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFSQGGSENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++LKTKD+ L+++++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IQMVDLMIGRVSNQLKTKDMALELSDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L EI G V VDV+
Sbjct: 788 KILFEEIGPGQLVTVDVE 805
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|229494287|ref|ZP_04388050.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|453067540|ref|ZP_21970827.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
gi|226183250|dbj|BAH31354.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Rhodococcus erythropolis PR4]
gi|229318649|gb|EEN84507.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|452766831|gb|EME25074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
Length = 847
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/739 (57%), Positives = 563/739 (76%), Gaps = 22/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ E TE G G+ + L+++G NLT+ A EGKLDPV+GR +IERV
Sbjct: 140 QLLSGYQGKEPTETGGTRGEAGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERV 198
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++
Sbjct: 199 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSR 258
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 259 YRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI 318
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV
Sbjct: 319 GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALV 378
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + +EK A+
Sbjct: 379 AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARREKESAID 438
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFEKA LRD+E L AQ + + + AGD+ V+ EVD I ++ W
Sbjct: 439 AQDFEKAANLRDKEKTLVAQ--------RAEREKQWRAGDL-DVIAEVDDEQIAEVLGNW 489
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+MEE LHKR+IGQ+EAVK++S+AIRR R GLK+P RP SFIF
Sbjct: 490 TGIPVFKLTEEETTRLLRMEEELHKRIIGQEEAVKSVSKAIRRTRAGLKDPKRPSGSFIF 549
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+ELAK+LA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLT
Sbjct: 550 AGPSGVGKTELAKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLT 609
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 610 EKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTS 669
Query: 687 VIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K +G +S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT ++
Sbjct: 670 DISKA---VGLGFSSGTGTESNYERMKLKVHDELKKHFRPEFLNRIDDIVVFHQLTNEQI 726
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+ML V LK KD+ ++VT++ + + + G++P GARPLRR I R +ED M+E
Sbjct: 727 VQMVDLMLARVEAALKNKDMAMEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQMSE 786
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L EI G V+VDV++
Sbjct: 787 KILFGEIGPGHIVLVDVEN 805
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|269926455|ref|YP_003323078.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790115|gb|ACZ42256.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 820
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/734 (57%), Positives = 559/734 (76%), Gaps = 15/734 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A +VI LA +EA+R H+YIG+EHLLLGL+REGEG+AA VLE+LG + +R QV+
Sbjct: 86 LTPRARRVIELAFDEAKRQNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRAQVL 145
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ +S+ A G + K P ++ GT+LT+LA KLDP+VGR+ +IERV+QIL
Sbjct: 146 QVINQSS----AYSQQGKAATKTPYIDALGTDLTELARNDKLDPIVGREKEIERVMQILS 201
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQRI + DVPDT+ K+V++LDMG LVAGTKYRGEF
Sbjct: 202 RRTKNNPALIGEPGVGKTAIVEGLAQRIVNCDVPDTLLNKRVLSLDMGALVAGTKYRGEF 261
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK+M EIK+S I LFIDE+HTL+GAGAAEGA+DAANILKP+L+RGE+Q IGATTL
Sbjct: 262 EERLKKIMAEIKESGAI-LFIDELHTLVGAGAAEGAVDAANILKPALSRGEIQVIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IE+D ALERRFQPV V EP+V+ETI+ILKG+R RYE HHKL+ TDEAL +AA L
Sbjct: 321 DEYRKYIERDAALERRFQPVMVEEPTVEETIEILKGVRPRYEAHHKLKITDEALKAAAYL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ +Y+SDRFLPDKAIDL+DEA SRVR+ A P ++ + L+ I EK A+ Q++E
Sbjct: 381 AARYVSDRFLPDKAIDLVDEAASRVRMHRAASPPSLKDALRHLKAIQDEKEAAINAQNYE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A RDRE L+ +I L + +E +AE P VTE DI +VS WTGIP+ ++
Sbjct: 441 MAAAFRDREERLQERIGMLEQQWQEEQQAEE------PYVTEEDISQVVSMWTGIPLTRI 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLLKMEE LHKR++GQDEA+ ++RA+RRAR G+K+P RP+ SFIF GPTGVGK
Sbjct: 495 AGEESERLLKMEEELHKRIVGQDEAITTVARAVRRARTGMKDPRRPVGSFIFLGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELAK LA + FGSE+A+I++DMSEFMERH V++L+G+PPGYVGY EGGQLTEAVRR+ +
Sbjct: 555 TELAKTLAEFMFGSEDALIKIDMSEFMERHAVARLVGAPPGYVGYEEGGQLTEAVRRKSF 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+ FNM+LQILEDG LTD+KGR V+F+NT++IMTSN+G+ +I +
Sbjct: 615 SVILLDEIEKAHPEAFNMLLQILEDGHLTDAKGRRVNFRNTIIIMTSNIGAEMINRDT-T 673
Query: 695 IGFDLDYDE---KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF + DE + +Y ++ V ELK++FRPEFLNR+D ++VF L+ +++I DI
Sbjct: 674 VGFTIRTDEAKAQQRAYENMRDKVLSELKKHFRPEFLNRIDAVVVFHSLSPEHIRKIVDI 733
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
+ V +RL + I+L++TE + GY+ +YGARPLRR I +ED +AE +L +
Sbjct: 734 QIDRVRERLAEQQIQLKLTEEALNTLARRGYDQTYGARPLRRLIQTEVEDKLAEGVLEGK 793
Query: 812 IKEGDSVIVDVDSD 825
+ G +V+VD D
Sbjct: 794 FQPGSTVVVDAHDD 807
>gi|118411088|ref|YP_874483.1| ATP-dependent clp protease ATP-binding subunit [Phaeodactylum
tricornutum]
gi|116739835|gb|ABK20706.1| ATP-dependent clp protease ATP-binding subunit [Phaeodactylum
tricornutum]
Length = 926
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/765 (54%), Positives = 561/765 (73%), Gaps = 41/765 (5%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT +A +V+ +A E + LG N++G+EH+LL L+ E +GVA R L+
Sbjct: 68 GRGTGFVASEI--PFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALIAESDGVAMRTLD 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGG--------SSGNKMPTLEEYGTNLTKLAE 192
L D +R ++ + E+ E + + G+ PTL+EY N+TK A
Sbjct: 126 KLNVDIHKLRNLILTYIEETQEEILRPLTQAEKFLLEREKKGSPTPTLDEYAENITKEAI 185
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+G LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA+AEGLAQ I + VPD ++
Sbjct: 186 DGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTAVAEGLAQLILTEKVPDFLD 245
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+ IDE+HTL+GAGAAEGA+D
Sbjct: 246 GSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVIIVIDEIHTLVGAGAAEGAVD 305
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQPV V EPSV TI+IL+GLR
Sbjct: 306 AANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQPVHVEEPSVGTTIEILRGLR 365
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
++E HH L Y D+AL AA LS +Y++DR+LPDKAID++DEAG+RVRL + +LP R
Sbjct: 366 SKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLDEAGARVRLENRRLPLGLRS 425
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI-----SALVDKGKEMSKAETEA 487
L EL++ K+K + ++ DFE A +L D EM+++ I SAL + + S+ + +
Sbjct: 426 LMHELQETIKDKEDCIKEHDFEAAKQLLDHEMEVRTHIRIMKQSALTSEARGFSRRDVD- 484
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
+VTE D+ +VS WTGIPV K++ ES RLLKME+T+H+R+IGQ AV A+SRAI
Sbjct: 485 -----MVTETDVSDVVSNWTGIPVTKITGSESARLLKMEDTIHERIIGQKHAVVAVSRAI 539
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGL+NPNRPIASFIF+GPTGVGK+EL KAL+ Y FGSEE+MIRLDMSE+ME+HTV+
Sbjct: 540 RRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFGSEESMIRLDMSEYMEKHTVA 599
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EK HPDVFN++LQIL+DGRLTDSKG
Sbjct: 600 KLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKGHPDVFNLLLQILDDGRLTDSKG 659
Query: 668 RTVDFKNTLLIMTSNVGSSVIEK------------GGRRIGFD--LDYDE-----KDSS- 707
R +DF NTL+IMT+N+GS +IE+ GG +I D + ++ KD
Sbjct: 660 RVIDFTNTLIIMTTNLGSKIIERESGIKSKTEQGEGGFKITPDAVIGWEPAPEPIKDPEV 719
Query: 708 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 767
+ R+ LV +ELK +FRPEFLNR+DE+IVF LT++++ EI ++M+K V +RLK K I L
Sbjct: 720 FERVTKLVNDELKNFFRPEFLNRIDEIIVFNHLTRIDIWEICELMIKSVQNRLKDKGINL 779
Query: 768 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
V + + +EGY+P YGARPLRRAIM+ LED++AE+ L++ +
Sbjct: 780 IVELSVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQCLSKTL 824
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE+FTE AIKVIML+QEEARR+GHN++G+E LLLG++ + G+ A+ L+ L R
Sbjct: 1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGVIGQRHGIGAKALKKLKVTLKKAR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
++ +G T V + +
Sbjct: 61 KEIELYIGRGTGFVASEI 78
>gi|399889691|ref|ZP_10775568.1| negative regulator of genetic competence mecB/clpC [Clostridium
arbusti SL206]
Length = 813
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/733 (56%), Positives = 564/733 (76%), Gaps = 10/733 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EA L HNYI EH+LL L+REGEGVA +L NL AD +R +++
Sbjct: 82 LTPRTKRLLEISALEATNLNHNYISPEHILLALIREGEGVAFTILGNLNADFDRLRKEIM 141
Query: 155 R--MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
GE A + + + P L+++G +LT +A EGKLDPV+GR + +RV++I
Sbjct: 142 DGLAAGEGNNAKNSN-SVNQANSATPALDQFGRDLTVMASEGKLDPVIGRDGETQRVLEI 200
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNPCLIG+PGVGKTAIAEGLAQRI SG++P+ ++ K+V+TLD+ +VAG+KYRG
Sbjct: 201 LCRRTKNNPCLIGDPGVGKTAIAEGLAQRIVSGNIPEILKDKRVVTLDISSMVAGSKYRG 260
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEERLK++M EI+ S +I+FIDE+HT+IGAG AEGAIDA+NILKPSLARGE+QCIGAT
Sbjct: 261 EFEERLKRVMTEIRNSGNVIIFIDEIHTIIGAGGAEGAIDASNILKPSLARGEIQCIGAT 320
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
T+DEYRK+IEKD ALERRFQPV V EPS +E + IL+GLR++YE HH+++ TD+AL +A
Sbjct: 321 TIDEYRKYIEKDSALERRFQPVTVGEPSKEEAVLILRGLRDKYEAHHRVKITDDALEAAV 380
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +YI+DR+LPDKAIDLIDEAG++VR+ + P + + E+EL + KEK +A+R QD
Sbjct: 381 NLADRYITDRYLPDKAIDLIDEAGAKVRIENLTAPPDLKNQEEELEKTEKEKADAIRLQD 440
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FEKA LRD+E +LK +I K + +V+E I +V+ W IPVE
Sbjct: 441 FEKAARLRDKEKELKGKIEDFKKNWKNRKDVQNH------IVSETQIAAVVAKWANIPVE 494
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ ES++LLK+EE LHKRVIGQ+EAVK++SRA+RRARVGLK+P RPI SFIF GPTGV
Sbjct: 495 KLTEKESEKLLKLEEILHKRVIGQNEAVKSVSRAVRRARVGLKDPKRPIGSFIFLGPTGV 554
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+EL+KALA FG E ++IR+DMSE+ME+HTVS+LIGSPPGYVG+ +GGQLTE VRR+
Sbjct: 555 GKTELSKALAEAMFGDESSIIRIDMSEYMEKHTVSRLIGSPPGYVGFDDGGQLTEKVRRK 614
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+VVLFDEIEKAHPDVFN++LQILEDGRLTD KG+TV+F+NT++I+TSNVG+S I++
Sbjct: 615 PYSVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGKTVNFQNTIIILTSNVGASTIKR-Q 673
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+ +GF + DE + Y ++K + +ELK+ FRPEFLNR+D++IVF QL + +++E+ +M
Sbjct: 674 KSLGFSVSNDETEDEYEKMKDNIMDELKRSFRPEFLNRIDDIIVFHQLLEEDLQEVVKLM 733
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
L+ V RL +DI ++ TE + + ++G++P+YGARPLRRAI +++ED +AE++L +
Sbjct: 734 LESVSSRLNDQDINIKFTEEAEKLLAKKGFDPTYGARPLRRAITKIVEDKIAEEILNGSL 793
Query: 813 KEGDSVIVDVDSD 825
+GD+V V V+ +
Sbjct: 794 HKGDNVSVTVNEN 806
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 91 MF-ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF RF E+ KV+ A+EEA+ H YIG+EH+LLG+L+E G++ ++L NLG +
Sbjct: 1 MFSNRFNERTEKVLFYAKEEAQMFQHGYIGTEHVLLGILKEENGISKKILNNLGVTIDGV 60
Query: 150 RTQVIRMVGE 159
R + G+
Sbjct: 61 RNLIAEYEGK 70
>gi|441216366|ref|ZP_20976990.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
gi|440624518|gb|ELQ86380.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
Length = 827
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/738 (57%), Positives = 569/738 (77%), Gaps = 21/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + EA AG GG + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKEAAEAGTGGRGGESGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAAALRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 650 SDISKA---VGLGFSQGGSENNYERMKQKVHDELKKHFRPEFLNRIDDVIVFHQLTQDEI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++LKTKD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 707 IQMVDLMIGRVSNQLKTKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 766
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L EI G V VDV+
Sbjct: 767 KILFEEIGPGQLVTVDVE 784
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|170757820|ref|YP_001783151.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B1 str. Okra]
gi|429246823|ref|ZP_19210119.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
gi|169123032|gb|ACA46868.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum B1 str. Okra]
gi|428756157|gb|EKX78733.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
Length = 811
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/732 (57%), Positives = 570/732 (77%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D +R ++I
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLRKELI 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ + G S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLSGQETPKDEGSKKSSK-SSTPTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILC 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 260 EDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A L
Sbjct: 320 DEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDL+DEAGS+VR+++ P + + +E++L ++ KEK +A+R QDFE
Sbjct: 380 SDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K+
Sbjct: 440 KAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E+ LH RVIGQ+EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 TEKESERLLKLEDILHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY
Sbjct: 554 TELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 614 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKT 672
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + ++EI +ML
Sbjct: 673 LGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +R+K + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L IK
Sbjct: 733 KTVSNRVKDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIK 792
Query: 814 EGDSVIVDVDSD 825
+GDSV V+ D
Sbjct: 793 KGDSVKVNTIED 804
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA +L N +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|386356248|ref|YP_006054494.1| ATP-dependent Clp protease [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806756|gb|AEW94972.1| putative ATP-dependent Clp protease [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 843
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/760 (57%), Positives = 578/760 (76%), Gaps = 19/760 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G A G G+ + L+++G NLT+ A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGGKESATAGGPAEGTPSTSL-VLDQFGRNLTQAARETKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+
Sbjct: 379 AATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDS 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L A K + E +AGD+ VV EVD I +++ T
Sbjct: 439 QDFEKAASLRDKEKQLLA--------AKTKREKEWKAGDMD-VVAEVDEELIAEVLATAT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKTLAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 610 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ ++ +
Sbjct: 670 ISK-GFNLGFAAAGDVK-TGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQLTEDDIIQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ V +RLK +D+ ++++ ++ + ++GY+P GARPLRR I R +ED ++EK+
Sbjct: 728 IVDLMIARVDERLKDRDMGIELSPEAKKLLAKKGYDPILGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
L E++ G V+V + +G ++AD P+
Sbjct: 788 LFNELRPGHIVVVGTEGEGEEKKFTFRGEEKVTVADAPPI 827
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|441518183|ref|ZP_20999908.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
hirsuta DSM 44140 = NBRC 16056]
gi|441454872|dbj|GAC57869.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
hirsuta DSM 44140 = NBRC 16056]
Length = 846
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/737 (58%), Positives = 567/737 (76%), Gaps = 20/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD +++R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNSVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG SS + P+ L+++G NLT A E KLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEPETAGTGGRSSDSGTPSTSLVLDQFGRNLTAAAAESKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGNVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+H L+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHQLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RYE HHK+ +D AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEQHHKVSISDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + + KEK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDRIADARKEKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L IS ++ K+ AGD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQL---ISERTEREKQW-----RAGDM-DVVAEVDDEEIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+SRAIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSRAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHP+++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K +GF D D S+Y R+K V +ELK++FRPEFLNR+D++IVF QL K E+
Sbjct: 671 RDISK-AVGMGFSKD-DGSGSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLNKDEI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD++L++TE+ + + G++P GARPLRR I R +ED ++E
Sbjct: 729 VQMVDLMIGRVEQQLKAKDMDLELTEKAKNLLARRGFDPVLGARPLRRTIQREIEDQLSE 788
Query: 806 KMLAREIKEGDSVIVDV 822
K+L EI G +++DV
Sbjct: 789 KILFNEIGAGQIILIDV 805
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|407277667|ref|ZP_11106137.1| DNA binding ATP-dependent peptidase [Rhodococcus sp. P14]
Length = 841
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/737 (56%), Positives = 567/737 (76%), Gaps = 20/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ + G G + + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPQESGTSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD+ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDKALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 AASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + AGD+ V+ EVD I +++ WT
Sbjct: 440 QDFEKAANLRDKEKQLVAQ--------RAEREKQWRAGDL-DVIAEVDEEQIAEVLANWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPAGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTAD 670
Query: 688 IEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +G +S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 671 ISKA---VGLGFTKGTGAESNYERMKLKVNDELKKHFRPEFLNRIDDIIVFHQLTQEQII 727
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
E+ D+M+ V +LK KD+ +++TE+ + + + G++P GARPLRR I R +ED ++EK
Sbjct: 728 EMVDLMIGRVEVQLKNKDMGIELTEKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEK 787
Query: 807 MLAREIKEGDSVIVDVD 823
+L EI G V+VDV+
Sbjct: 788 ILFNEIGPGQIVLVDVE 804
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|299830628|ref|YP_003735076.1| ATP-dependent clp protease ATP-binding subunit [Durinskia baltica]
gi|297384992|gb|ADI40291.1| ATP-dependent clp protease ATP-binding subunit [Durinskia baltica]
Length = 911
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/774 (54%), Positives = 562/774 (72%), Gaps = 43/774 (5%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT +A +V+ +A E + LG N++G+EH+LL L+ E +GVA R L+
Sbjct: 68 GRGTGFVASEI--PFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALIAESDGVAMRTLD 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGG--------SSGNKMPTLEEYGTNLTKLAE 192
L D +R ++ + E+ E + + G+ PTL+EY N+TK A
Sbjct: 126 KLNVDIQKLRNLILTYIEETQEEILRPLTQAEKFLLEREKKGSPTPTLDEYAENITKEAI 185
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+G LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA+AEGLAQ I + VPD ++
Sbjct: 186 DGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTAVAEGLAQLILTEKVPDFLD 245
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+ IDE+HTL+GAGAAEGA+D
Sbjct: 246 GSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVIIVIDEIHTLVGAGAAEGAVD 305
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQPV V EPSV TI+IL+GLR
Sbjct: 306 AANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQPVHVEEPSVGTTIEILRGLR 365
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
++E HH L Y D+AL AA LS +Y++DR+LPDKAID++DEAG+RVRL + +LP R
Sbjct: 366 SKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLDEAGARVRLENRRLPLGLRS 425
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI-----SALVDKGKEMSKAETEA 487
L EL++ K+K E ++ DFE A +L D EM+++ I SAL ++ + S+ + +
Sbjct: 426 LMHELQETIKDKEECIKEHDFEAAKQLLDHEMEVRTHIRIMKQSALTNEARGFSRRDVD- 484
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
+VTE D+ ++S WTGIPV K++ ES+RLLKME+T+H+R+IGQ AV A+S+AI
Sbjct: 485 -----MVTETDVSDVISNWTGIPVTKITGSESERLLKMEDTIHERIIGQKHAVVAVSKAI 539
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGL+NPNRPIASFIF+GPTGVGK+EL KAL+ Y F SE++MIRLDMSE+ME+HTV+
Sbjct: 540 RRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFSSEDSMIRLDMSEYMEKHTVA 599
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPDVFN++LQIL+DGRLTDSKG
Sbjct: 600 KLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKG 659
Query: 668 RTVDFKNTLLIMTSNVGSSVIEK---------GGRRIGFDLDYDE-----------KDSS 707
R +DF NTL+IMT+N+G+ +IE+ G R GF + D KD
Sbjct: 660 RVIDFTNTLIIMTTNLGAKIIERESGIKSKSDQGER-GFKITPDAVLGWEPVPEPIKDPE 718
Query: 708 -YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIE 766
+ R+ LV EELK +FRPEFLNR+DE+IVF LT++++ EI ++ +K V RLK K I
Sbjct: 719 LFERVSKLVNEELKNFFRPEFLNRIDEIIVFNHLTRIDIWEICELQIKSVQKRLKEKGIN 778
Query: 767 LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
L V + + +EGY+P YGARPLRRAIM+ LED++AE+ L++ + +IV
Sbjct: 779 LIVDLAVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQCLSKTLYPNTKIIV 832
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE+FTE AIKVIML+QEEARR+GHN++G+E LLLG++ + G+ AR L+ L R
Sbjct: 1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGVIGQRHGIGARALKKLKVTLKKAR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
++ +G T V + +
Sbjct: 61 KEIELYIGRGTGFVASEI 78
>gi|425449338|ref|ZP_18829179.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
gi|389764052|emb|CCI09557.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
Length = 795
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/764 (56%), Positives = 555/764 (72%), Gaps = 56/764 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGSGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITADP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPT-----LEEYGTN 186
E +AA++L G D +R +++ GE A G G ++ T L +YG N
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLLKNAGEKV-ASGRLTGDSDYKDQKNTPQGGILAQYGRN 175
Query: 187 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 246
L++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLAQRI SGD
Sbjct: 176 LSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLAQRIHSGD 235
Query: 247 VPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 306
+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GAG+
Sbjct: 236 IPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGSIILFIDEIHTLVGAGS 295
Query: 307 AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 366
GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++ I+
Sbjct: 296 MGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQAIE 355
Query: 367 ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 426
IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 356 ILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQ 415
Query: 427 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 486
+ E+ +E I E +L+
Sbjct: 416 SKSPAEVSEESPLINPE----------------------------SLI------------ 435
Query: 487 AGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRA 546
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+SRA
Sbjct: 436 -----PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEAVNAVSRA 490
Query: 547 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 606
IRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME HTV
Sbjct: 491 IRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHTV 550
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
SKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDGRLTDS+
Sbjct: 551 SKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSQ 610
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 726
GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+ELKQYFRPE
Sbjct: 611 GRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDELKQYFRPE 670
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+ EGY+PSY
Sbjct: 671 FLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPSY 730
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA+ R LEDS+AE ML+ ++ GD ++DV +DG VTV
Sbjct: 731 GARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTADGVVTV 774
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRAGHSVVGTEHLLLGLIGEATAAAALILKDL 52
>gi|269101123|ref|YP_003289271.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Ectocarpus siliculosus]
gi|266631631|emb|CAV31302.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Ectocarpus siliculosus]
gi|270118761|emb|CAT18853.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Ectocarpus siliculosus]
Length = 903
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/777 (56%), Positives = 578/777 (74%), Gaps = 40/777 (5%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
G+ GFV A+ FT +A K++ ++ ++++ L H+YI +EH+ L LL + +G+ A+VL+
Sbjct: 68 GKGTGFV--AIEIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDGICAKVLQ 125
Query: 141 NLGADPSNIRTQVIRMVGESTEA---VGAGVGGGSSGNK--------------------- 176
NLGA+ I++ ++ + ++ E V A V G +
Sbjct: 126 NLGANIPRIKSYILNELDQNHEGSPKVLANVASGEQSSNPNIKQTKDLFLFDDLDPSSLT 185
Query: 177 MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAE 236
P L EY T+LT+ AE K+DPVVGR+ +IERV+QI+ RR KNNP LIGEPGVGKTA+AE
Sbjct: 186 APNLMEYTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILIGEPGVGKTAVAE 245
Query: 237 GLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFID 296
GLAQRI +VP + K+ LD+ LL+AGTKYRGEFEERLK++++E+K+ II+ ID
Sbjct: 246 GLAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKNIIIVID 305
Query: 297 EVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKV 356
EVHTL+GAGAAEGA+DAANILKP+LARGELQCIGATT+DEYR+HIEKDPALERRFQPV V
Sbjct: 306 EVHTLVGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALERRFQPVWV 365
Query: 357 PEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAG 416
EPS++ETI ILKGLR RYE HH+L T+EALV+AA L QYI+DRFLPDKAIDLIDE
Sbjct: 366 NEPSIEETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRFLPDKAIDLIDEGS 425
Query: 417 SRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDK 476
+RVRL + +LP + L+KELR+I ++K+ AVR Q FE A E+RD E+ L++Q+ A++
Sbjct: 426 ARVRLVNYRLPPAVQILDKELRRILEDKDLAVREQRFETATEIRDDELSLRSQMGAIIKA 485
Query: 477 GKE-MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 535
+ K E VG DI IV+ WTG+PV K++ DE+ RLL++E LH+RVIG
Sbjct: 486 SNTPIPKGVLERLKVG----SQDIASIVALWTGVPVTKITKDENTRLLELENVLHQRVIG 541
Query: 536 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 595
Q EAV A++RA+RRARVG++N RPIASF FSGPTGVGK+EL K LA+++FG+E+AM+RL
Sbjct: 542 QKEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAMVRL 601
Query: 596 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 655
DMSEFMERHTV+KLIGSPPGY+GY EGGQLTEAVRR+PYTV+LFDE+EKAHPDVFN++LQ
Sbjct: 602 DMSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNLLLQ 661
Query: 656 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG---GRRIGFDLD-YDEKDSSYNRI 711
ILEDGRLTDSKGR +DFKNT+LIMTSN+GS I+ + +GF + D + + Y ++
Sbjct: 662 ILEDGRLTDSKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADTQKTKYAQL 721
Query: 712 KSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT-KDIELQVT 770
+ V E LK +F+PEFLNR+DE+IVF QLTK + EIA IM+ ++ +R+K KDI L +T
Sbjct: 722 CNTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKEKDITLSLT 781
Query: 771 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGD----SVIVDVD 823
R E +VEEG+NP+YGARPLRRA+++L+ED ++ + L + + D ++VDVD
Sbjct: 782 PRMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVD 838
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+A++VIM++QEE+RRLGHN++G+E +LLGLL EG GV + G + +R
Sbjct: 1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTINAVREYGINIRKVR 60
Query: 151 TQVIRMVGEST 161
+V R++G+ T
Sbjct: 61 IEVERLIGKGT 71
>gi|336120464|ref|YP_004575249.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Microlunatus
phosphovorus NM-1]
gi|334688261|dbj|BAK37846.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Microlunatus
phosphovorus NM-1]
Length = 849
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/740 (56%), Positives = 568/740 (76%), Gaps = 19/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R+QV+
Sbjct: 80 FTPRAKKVLELSLREALQINHSYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRSQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GA G + + M L+++G NLT+ A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGFQGKEAATAGAPEQGNAPSSSM-VLDQFGRNLTQAARENKLDPVIGRETEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
+L RRTKNNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ TLD+G LVAG++Y
Sbjct: 199 TVLSRRTKNNPVLIGEPGVGKTAVVEGLSQAIVRGDVPETLRDKQIYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +++LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDVVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKD ALERRFQP++V EPS+ TI IL+GLR+RYE HH++ TDEALV+
Sbjct: 319 ATTLDEYRKYVEKDAALERRFQPIQVAEPSIAHTIDILRGLRDRYEAHHRITITDEALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AAQ++ +YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + EK A+
Sbjct: 379 AAQMADRYISDRFLPDKAIDLIDEAGARLRIRRMTAPPDLREFDEKIAAVRLEKEAAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L A S +A+ ++GD+ VV EVD I ++S T
Sbjct: 439 QDFERAASLRDDEKKLLASRSE--------REAQWKSGDLD-VVAEVDEEIIAEVLSTAT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ L KR IGQ +AV+A+SR+IRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEESARLLRMEDELGKRYIGQHDAVRALSRSIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I+LDMSEF E+HT S+L GSPPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELTKALTEFLFGDEDALIQLDMSEFSEKHTASRLFGSPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQIL++GRLTD++GR VDFKNT+++MT+N+G+
Sbjct: 610 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVMTTNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D + SY ++K+ V +ELKQ+FRPEFLNR+DE++VFRQLT+ +++
Sbjct: 670 IAK-SVSLGFSQAGD-AEGSYEKMKAKVADELKQHFRPEFLNRVDEIVVFRQLTQADIER 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ RLK KD+ +++T + + + G++P GARPLRRA+ R +ED +AEK+
Sbjct: 728 IVDLMVAQIEIRLKDKDMGIELTPAAKTLIAKRGFDPVLGARPLRRALQRDIEDMLAEKI 787
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VDV G+
Sbjct: 788 LFSEVKSGQIVVVDVADPGS 807
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+V ++G ++
Sbjct: 61 QKVEEIIGHGQQS 73
>gi|357400203|ref|YP_004912128.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766612|emb|CCB75323.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 822
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/760 (57%), Positives = 578/760 (76%), Gaps = 19/760 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G A G G+ + L+++G NLT+ A E KLDPV+GR+ +IERV+
Sbjct: 119 QLLSGYQGGKESATAGGPAEGTPSTSL-VLDQFGRNLTQAARETKLDPVIGREKEIERVM 177
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 178 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRY 237
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 238 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 297
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 298 ATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDAALVA 357
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+
Sbjct: 358 AATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDS 417
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L A K + E +AGD+ VV EVD I +++ T
Sbjct: 418 QDFEKAASLRDKEKQLLA--------AKTKREKEWKAGDM-DVVAEVDEELIAEVLATAT 468
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LHKRVIGQ +A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 469 GIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFA 528
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 529 GPSGVGKTELSKTLAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 588
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 589 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 648
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G +GF D K + Y R+K+ V EELKQ+FRPEFLNR+D+++VF QLT+ ++ +
Sbjct: 649 ISK-GFNLGFAAAGDVK-TGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQLTEDDIIQ 706
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ V +RLK +D+ ++++ ++ + ++GY+P GARPLRR I R +ED ++EK+
Sbjct: 707 IVDLMIARVDERLKDRDMGIELSPEAKKLLAKKGYDPILGARPLRRTIQREIEDQLSEKI 766
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
L E++ G V+V + +G ++AD P+
Sbjct: 767 LFNELRPGHIVVVGTEGEGEEKKFTFRGEEKVTVADAPPI 806
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQA 52
>gi|375102873|ref|ZP_09749136.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
gi|374663605|gb|EHR63483.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
Length = 850
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/736 (56%), Positives = 569/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GAG G G+ + + L+++G NLT A E KLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAARENKLDPVIGRNKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 379 AATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q K + + + GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKTLLGQ--------KAEREKQWKDGDLD-VVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ +
Sbjct: 670 ISK-SVSLGFSSGADET-GRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V ++LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMVSRVEEQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G +IVDV+
Sbjct: 788 LFGEVQPGQIIIVDVE 803
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|148381451|ref|YP_001255992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 3502]
gi|153932782|ref|YP_001385826.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 19397]
gi|153936468|ref|YP_001389233.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. Hall]
gi|387819793|ref|YP_005680140.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
gi|148290935|emb|CAL85071.1| negative regulator of genetic competence [Clostridium botulinum A
str. ATCC 3502]
gi|152928826|gb|ABS34326.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. ATCC 19397]
gi|152932382|gb|ABS37881.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. Hall]
gi|322807837|emb|CBZ05412.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
Length = 811
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/732 (57%), Positives = 569/732 (77%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D +R ++I
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLRKELI 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ + G S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLSGQETPKDEGSKKSSK-SSTPTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILC 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 260 EDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A L
Sbjct: 320 DEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDL+DEAGS+VR+++ P + + +E++L ++ KEK +A+R QDFE
Sbjct: 380 SDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K+
Sbjct: 440 KAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E LH RVIGQ+EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 TEKESERLLKLENILHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY
Sbjct: 554 TELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 614 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKT 672
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + ++EI +ML
Sbjct: 673 LGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +R+K + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L IK
Sbjct: 733 KTVSNRVKDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIK 792
Query: 814 EGDSVIVDVDSD 825
+GDSV V+ D
Sbjct: 793 KGDSVKVNTIED 804
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA +L N +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|443294551|ref|ZP_21033645.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
gi|385882023|emb|CCH21911.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
Length = 847
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/764 (57%), Positives = 587/764 (76%), Gaps = 25/764 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A GA G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKEPAAAGAAPGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGL+Q+I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+
Sbjct: 379 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A +LRD+E L Q K + E +AGD+ VV+EVD I ++ WT
Sbjct: 439 QDFERAAQLRDKEKQLLGQ--------KAQREKEWKAGDLD-VVSEVDDEQIAEVLGNWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+
Sbjct: 610 KVRRRPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+
Sbjct: 670 VAK-AVSLGFQQSED-SESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQNEILS 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DIM++ + +L KD+ L++T+ ++ + ++G++P GARPLRR I R +ED+++E++
Sbjct: 728 IVDIMIRRIETQLHNKDMGLELTDNAKKYLSKKGFDPVLGARPLRRTIQRDIEDNLSERI 787
Query: 808 LAREIKEGDSVIVDV-----DSDGNVTVLNGSSGAPESLADPLP 846
L E+ G V+VD D D + V G+ P + D +P
Sbjct: 788 LFNELTPGQIVVVDCEGDPEDIDKSKLVFRGAD-KPVEVPDAVP 830
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|187776547|ref|ZP_02993020.1| hypothetical protein CLOSPO_00059 [Clostridium sporogenes ATCC
15579]
gi|187775206|gb|EDU39008.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sporogenes ATCC 15579]
Length = 814
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/733 (57%), Positives = 574/733 (78%), Gaps = 11/733 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D ++ ++I
Sbjct: 84 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDVERLKKELI 143
Query: 155 R-MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
+ + GE E + SS + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 144 KNLSGE--EMLKDEGSKKSSKSSTPTLDQFGRDLTEMAEEGKIDPVIGRDKETQRVLEIL 201
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNPCLIGEPGVGKTAIAEGLAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGE
Sbjct: 202 CRRTKNNPCLIGEPGVGKTAIAEGLAQNIINGNIPEILKNKRVVTLDLTSMIAGAKYRGE 261
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATT
Sbjct: 262 FEDRLKKIMEEVRNSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATT 321
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LDEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A
Sbjct: 322 LDEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVN 381
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI DRFLPDKAIDLIDEAGS+VR+ + P + + +E++L ++ KEK +A+R QDF
Sbjct: 382 LSDRYIRDRFLPDKAIDLIDEAGSKVRIENLIAPPDLKNIEEQLDKVVKEKEDAIRVQDF 441
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K
Sbjct: 442 EKAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIASVVSKWTNIPVNK 495
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES+RLLK+E+ LH RVIGQ+EA+K++S+++RRARVGLK+P RPI SFIF GPTGVG
Sbjct: 496 LTEKESERLLKLEDILHNRVIGQEEAIKSVSKSVRRARVGLKDPKRPIGSFIFLGPTGVG 555
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLTE VR P
Sbjct: 556 KTELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTEKVRTNP 615
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 616 YSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QK 674
Query: 694 RIGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + +KEI +M
Sbjct: 675 TLGFNTSIEEERETEYEKMKDNIMHELKHSFRPEFLNRIDDIIVFHQLREEHIKEIVKLM 734
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
LK V +R++ + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L I
Sbjct: 735 LKIVSNRVEDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNI 794
Query: 813 KEGDSVIVDVDSD 825
K+GDSV V+ D
Sbjct: 795 KKGDSVKVNTIED 807
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 VVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP 146
++ MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA ++L N G
Sbjct: 1 MINMMFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKQLLNNSGITE 59
Query: 147 SNIRTQVIRMVGE 159
+R + R G+
Sbjct: 60 DKVRQLIERYEGK 72
>gi|168178801|ref|ZP_02613465.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
gi|182670016|gb|EDT81992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
Length = 811
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/732 (57%), Positives = 569/732 (77%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D +R ++I
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLRKELI 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ + G S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLSGQETPKDEGSKKSSK-SSTPTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILC 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 260 EDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A L
Sbjct: 320 DEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDL+DEAGS+VR+++ P + + +E++L ++ KEK +A+R QDFE
Sbjct: 380 SDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K+
Sbjct: 440 KAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E LH RVIGQ+EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 TEKESERLLKLENILHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY
Sbjct: 554 TELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 614 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKT 672
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + ++EI +ML
Sbjct: 673 LGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +R+K + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L IK
Sbjct: 733 KTVSNRVKDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIK 792
Query: 814 EGDSVIVDVDSD 825
+GDSV V+ D
Sbjct: 793 KGDSVKVNTIED 804
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA +L N +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|296138309|ref|YP_003645552.1| ATPase AAA [Tsukamurella paurometabola DSM 20162]
gi|296026443|gb|ADG77213.1| ATPase AAA-2 domain protein [Tsukamurella paurometabola DSM 20162]
Length = 855
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/743 (56%), Positives = 567/743 (76%), Gaps = 26/743 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGV---GGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQP 204
+++ E E GAG GG +G +L +++G NLT A +GKLDPV+GR
Sbjct: 140 QLLSGYQGKEGGEPAGAGARASSGGEAGTPSTSLVLDQFGRNLTAAAAQGKLDPVIGRSK 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G L
Sbjct: 200 EIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPETLKDKQLYTLDLGSL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERL+K+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 260 VAGSRYRGDFEERLRKVLKEIDTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ I+ILKGLR+RYE HH++ T
Sbjct: 320 ELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHAIEILKGLRDRYEAHHRISIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D ALV+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + R+ + ++ +EK
Sbjct: 380 DSALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRQFDDKIADARREK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQH 501
A+ QDFEKA LRD+E L + + + + AGD+ VV EVD I
Sbjct: 440 ESAIDEQDFEKAASLRDKEKQLIGE--------RAEREKQWRAGDL-DVVAEVDEEQIAE 490
Query: 502 IVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPI 561
++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP
Sbjct: 491 VLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPS 550
Query: 562 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 621
SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY E
Sbjct: 551 GSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEE 610
Query: 622 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 681
GGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TS
Sbjct: 611 GGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTS 670
Query: 682 NVGSSVIEKGGRRIGFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
N+G+ I K +G + D ++Y+R+K V +ELK++FRPEFLNR+D+++VF QL
Sbjct: 671 NLGTGDISKA---VGLGFTQGDSDGANYDRMKQKVNDELKKHFRPEFLNRIDDIVVFHQL 727
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
T+ ++ E+ D+ML V LK KD+E++VT++ + + + G++P GARPLRR I R +E
Sbjct: 728 TQPQIIEMVDLMLSRVAVALKNKDMEIEVTDQAKSLLAKRGFDPVLGARPLRRTIQREIE 787
Query: 801 DSMAEKMLAREIKEGDSVIVDVD 823
D+++EK+L E+ G V+VDV+
Sbjct: 788 DNLSEKILFGELGPGQIVVVDVE 810
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV +VG+ +A
Sbjct: 61 SQVEEIVGQGQQA 73
>gi|331699829|ref|YP_004336068.1| ATPase [Pseudonocardia dioxanivorans CB1190]
gi|326954518|gb|AEA28215.1| ATPase AAA-2 domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 847
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/736 (57%), Positives = 569/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ AG G G+ + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKEPAEASAGRGEGTPSSSL-VLDQFGRNLTQQAREGKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQGIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKYVEKDPALERRFQPIQVGEPSVTHTIEILKGLRDRYEAHHRVTITDPALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 379 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAGVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q K + + ++GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAASLRDTEKQLLGQ--------KSEREKQWKSGDLD-VVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +V+N +LQ+LEDGRLTD +GRTVDFKNT++I TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEVYNTLLQVLEDGRLTDGQGRTVDFKNTVIIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 670 ISK-AVGLGFAQSNDEA-SNYERMKTKVHDELKKHFRPEFLNRIDDIIVFHQLTEEQIIT 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +L KD+ +++T + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMITRVEAQLANKDMGIELTPAAKSLLARRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G V+VDV+
Sbjct: 788 LFGEVEPGQIVLVDVE 803
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|383830025|ref|ZP_09985114.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
gi|383462678|gb|EID54768.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
Length = 850
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/736 (56%), Positives = 568/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GAG G G+ + + L+++G NLT A E KLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTASARENKLDPVIGRGKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 379 AATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q S + K+ GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ +
Sbjct: 670 ISK-SVSLGFSSGSDE-GGRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMVSRVEQQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G +IVDV+
Sbjct: 788 LFGEVQAGQIIIVDVE 803
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|153940994|ref|YP_001392864.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|384463825|ref|YP_005676420.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
gi|152936890|gb|ABS42388.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|295320842|gb|ADG01220.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
Length = 811
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/732 (56%), Positives = 569/732 (77%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D +R ++I
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLRKELI 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ + G S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLSGQETPKDEGSKKSSK-SSTPTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILC 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 260 EDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A L
Sbjct: 320 DEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDL+DEAGS+VR+++ P + + +E++L ++ KEK +A+R QDFE
Sbjct: 380 SDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K+
Sbjct: 440 KAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E LH RVIGQ+EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 TEKESERLLKLENILHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGY+G+ EGGQLT+ VR PY
Sbjct: 554 TELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYIGHDEGGQLTDKVRTNPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 614 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKT 672
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + ++EI +ML
Sbjct: 673 LGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +R+K + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L IK
Sbjct: 733 KTVSNRVKDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIK 792
Query: 814 EGDSVIVDVDSD 825
+GDSV V+ D
Sbjct: 793 KGDSVKVNTIED 804
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA +L N +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|453073740|ref|ZP_21976539.1| DNA binding ATP-dependent peptidase [Rhodococcus triatomae BKS
15-14]
gi|452765766|gb|EME24020.1| DNA binding ATP-dependent peptidase [Rhodococcus triatomae BKS
15-14]
Length = 849
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/762 (56%), Positives = 574/762 (75%), Gaps = 23/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ E E G G + + L+++G NLT+ A EGKLDPV+GR +IERV
Sbjct: 140 QLLSGYQGKEPAEGAGTSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++
Sbjct: 200 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 260 YRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALV 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFEKA LRD+E L AQ + + + +GD+ V+ EVD I ++ W
Sbjct: 440 AQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNW 490
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF
Sbjct: 491 TGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIF 550
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLT
Sbjct: 551 AGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLT 610
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 611 EKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTS 670
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 671 DISKAVGLG--FSSGSGSESNYERMKNKVHDELKKHFRPEFLNRIDDIIVFHQLTQEQII 728
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
E+ D+M+ V +LK KD+++++TE+ + + + G++P GARPLRR I R +ED ++EK
Sbjct: 729 EMVDLMIGRVEKQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEK 788
Query: 807 MLAREIKEGDSVIVDVDS-DGNVTVLNGS---SGAPESLADP 844
+L E+ G V+VDV+ DG + N +G P+ + P
Sbjct: 789 ILFNELGPGQIVLVDVEGWDGEGSGENAKFVFTGTPKPVNVP 830
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|170760517|ref|YP_001788851.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A3 str. Loch Maree]
gi|169407506|gb|ACA55917.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A3 str. Loch Maree]
Length = 811
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/732 (57%), Positives = 572/732 (78%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D ++ ++I
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLKKELI 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ + E SS + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLS-GQETPKDEDSKKSSKSSTPTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILC 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ I +G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQNIINGNIPEILKSKRVVTLDLTSMIAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 260 EDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A L
Sbjct: 320 DEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDL+DEAGS+VR+++ P + + +E++L ++ KEK +A+R QDFE
Sbjct: 380 SDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K+
Sbjct: 440 KAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E+ LH RVIGQ+EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 TEKESERLLKLEDILHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY
Sbjct: 554 TELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 614 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKT 672
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + ++EI +ML
Sbjct: 673 LGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +R+K + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L IK
Sbjct: 733 KTVSNRVKDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIK 792
Query: 814 EGDSVIVDVDSD 825
+GDSV V+ D
Sbjct: 793 KGDSVKVNTIED 804
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA ++L N +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKQLLNNFSITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|332295188|ref|YP_004437111.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178291|gb|AEE13980.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 812
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/744 (54%), Positives = 562/744 (75%), Gaps = 19/744 (2%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GG ++ + FT +A +V+ L+ EEAR LGHN+IG+EH+LLGLLREGEG+ ARVL+
Sbjct: 68 GRGGGTLISEI--PFTPRAKRVLELSWEEARLLGHNHIGTEHILLGLLREGEGIGARVLK 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+ D +R+Q+I+++ G V + P L E+G +LT LA E KLDPV+
Sbjct: 126 SFNMDIGKVRSQIIQIIS------GGSVIKSKESGRTPLLNEFGRDLTALAREKKLDPVI 179
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR +I R++QI+ RRTKNNP LIG+PGVGKTAI EGLAQ I +VP + K++I+LD
Sbjct: 180 GRDKEIRRLIQIMCRRTKNNPVLIGDPGVGKTAIVEGLAQAIVDNNVPPMLRKKRLISLD 239
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+GLL+AGTKYRGEFE+RLKK+ EEIK + IILFIDE+HT++GAGAAEGA+DAANILKP+
Sbjct: 240 LGLLIAGTKYRGEFEDRLKKITEEIKNAGNIILFIDELHTIVGAGAAEGAVDAANILKPA 299
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGE+QCIGATT+++YRKH+EKD LERRF P+ V EP+ +E IQIL GL+E+YE HH
Sbjct: 300 LARGEIQCIGATTVEDYRKHLEKDAGLERRFHPIHVEEPTQEEAIQILFGLKEKYEAHHG 359
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
++ T++A+ S+ +L+ +YISDRFLPDKAID++DEA ++V+L+ + E +EL K+L +
Sbjct: 360 VKITEDAITSSVKLAKRYISDRFLPDKAIDILDEASAKVKLKEPVMSEAWKELYKKLENV 419
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
+EK +R QDFEKA LRD E ++ +IS+ ++ +E++ E + VVTE DI
Sbjct: 420 IEEKENVIRMQDFEKAAVLRDNEQKIRNEISSFTNQ-EEVNALEVK------VVTEEDIA 472
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+VS WTGI ++K++ E +LL +EE LHKR++ Q EAV +I++ +RR R GL++P +P
Sbjct: 473 EVVSEWTGIELKKLTESEMKKLLNLEEALHKRIVSQHEAVVSIAKTLRRTRAGLQDPKKP 532
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
+ SF+F GPTGVGK+ELAK LA Y FGSEE+++R DMSE+ME+HTVS+LIG+PPGYVGYT
Sbjct: 533 LGSFLFLGPTGVGKTELAKTLAEYLFGSEESLLRFDMSEYMEKHTVSRLIGAPPGYVGYT 592
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLT+AVRRRP +V+LFDEIEKAHPDVFN++LQIL+DGRLTD KGRTV+FKNT+LIMT
Sbjct: 593 EGGQLTDAVRRRPSSVILFDEIEKAHPDVFNLLLQILDDGRLTDGKGRTVNFKNTILIMT 652
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
SN+G+ ++++G GF + D Y ++KS + ELK FRPEFLNR+DE+I+F L
Sbjct: 653 SNLGTHMLKEGSP--GFLASSNSLD--YEKLKSQIQRELKDTFRPEFLNRIDEIIIFNSL 708
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
T+ ++ I ML+ V ++LK I++ +E+ ++ +EGY+P +GARPL+R I + +E
Sbjct: 709 TQEDMINITKKMLENVKEKLKVNLIDITFSEKVVNQLAKEGYDPKFGARPLKRLIQKKIE 768
Query: 801 DSMAEKMLAREIKEGDSVIVDVDS 824
D +A+K++ IK+ DS+ VD DS
Sbjct: 769 DPIADKIIEGSIKQCDSIEVDFDS 792
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE+FTEKA K I+LAQEEA+RLGHN++G+EH+LLGLL EG G+A +V+ ++ +P +IR
Sbjct: 1 MFEKFTEKAAKAIILAQEEAKRLGHNFVGTEHILLGLLAEGTGIANKVINSMDIEPQDIR 60
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNKMP 178
+V R++G GGG+ +++P
Sbjct: 61 REVERLIGR---------GGGTLISEIP 79
>gi|226950963|ref|YP_002806054.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
gi|226843529|gb|ACO86195.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
Length = 811
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/732 (56%), Positives = 569/732 (77%), Gaps = 9/732 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EAR L HNYI EH+LLGL+RE EGVA +L NLG D +R +++
Sbjct: 81 LTPRTKRLLEMSLLEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLRKELV 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ + G S + PTL+++G +LT++AEEGK+DPV+GR + +RV++IL
Sbjct: 141 KNLSGQETPKDEGSKKSSK-SSTPTLDQFGRDLTEMAEEGKVDPVIGRDKETQRVLEILC 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIGEPGVGKTAIAEGLAQ I G++P+ ++ K+V+TLD+ ++AG KYRGEF
Sbjct: 200 RRTKNNPCLIGEPGVGKTAIAEGLAQNIIDGNIPEILKNKRVVTLDLTSMIAGAKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLKK+MEE++ S + ILFIDE+HT++GAGAAEGAIDAANILKP+LARGE+QCIGATTL
Sbjct: 260 EDRLKKIMEEVRSSKDTILFIDEIHTIVGAGAAEGAIDAANILKPALARGEIQCIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQP+ V EP+ +ETI+ILKGLR++YE HH++++TD+A+ +A L
Sbjct: 320 DEYRKYIEKDSALERRFQPINVGEPTKEETIEILKGLRDKYEAHHRVKFTDDAIYAAVNL 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAIDL+DEAGS+VR+++ P + + +E++L ++ KEK +A+R QDFE
Sbjct: 380 SDRYIRDRFLPDKAIDLMDEAGSKVRIQNLIAPPDLKNIEEQLDKVVKEKEDAIRVQDFE 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK ++ L AE E ++ +V+E I +VS WT IPV K+
Sbjct: 440 KAANLRDKEKELKEKLEGLKKDW----NAEKEGSNL--IVSEQQIAAVVSNWTNIPVNKL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES+RLLK+E LH RVIGQ+EA+K++SR++RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 494 TEKESERLLKLENILHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGSFIFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL KALA FG+E MIR+DMSE+ME+H+VS+LIGSPPGYVG+ EGGQLT+ VR PY
Sbjct: 554 TELTKALAEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDEGGQLTDKVRTNPY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHP+VFN++LQILEDGRLTD KG+TVDF+NT++IMTSNVG+S I + +
Sbjct: 614 SVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNVGASTISR-QKT 672
Query: 695 IGFDLDY-DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF+ +E+++ Y ++K + ELK FRPEFLNR+D++IVF QL + ++EI +ML
Sbjct: 673 LGFNTSIEEERETEYEKMKDNIMNELKHSFRPEFLNRIDDIIVFHQLREEHIREIVKLML 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K V +R+K + I+L+ TE + + +EGY+ +YGARPLRRAI +++ED ++E++L IK
Sbjct: 733 KTVSNRVKDQGIKLEFTEEAEKILAKEGYDTNYGARPLRRAITKIVEDKLSEEILKGNIK 792
Query: 814 EGDSVIVDVDSD 825
+GDSV V+ D
Sbjct: 793 KGDSVKVNTIED 804
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+M AQEEA + H Y+G+EH+LLG+L E +GVA +L N +R
Sbjct: 2 MFGRFTERAQKVLMNAQEEAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVR 60
Query: 151 TQVIRMVGE 159
+ R G+
Sbjct: 61 QLIERYEGK 69
>gi|383820312|ref|ZP_09975569.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
gi|383335314|gb|EID13745.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
Length = 843
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAAALRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AV+A+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVRAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFSQGGGENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD++L++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IQMVDLMVNRVATQLKAKDMDLKLTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L EI G V VDV++
Sbjct: 788 KILFEEIGPGQLVTVDVEN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|386852989|ref|YP_006271002.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
gi|359840493|gb|AEV88934.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
Length = 840
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/738 (58%), Positives = 576/738 (78%), Gaps = 19/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKEPAAAGTATGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGL+Q I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLSQSIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRISITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+
Sbjct: 379 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A +LRD+E L Q K + E +AGD+ VV+EVD I ++ WT
Sbjct: 439 QDFERAAQLRDKEKQLLGQ--------KAQREKEWKAGDLD-VVSEVDDEQIAEVLGNWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF D +S+Y+R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+ +
Sbjct: 670 VAK-AVSLGFQASED-TESNYDRMKVKVNDELKQHFRPEFLNRIDDTIVFHQLREQEILQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DI + +LK KD+ L++T+ ++ + ++G++P GARPLRR I R LED+++E++
Sbjct: 728 IVDIFTARIEGQLKNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRELEDTLSEQI 787
Query: 808 LAREIKEGDSVIVDVDSD 825
L E++ G V+VD + D
Sbjct: 788 LFNELRPGQIVVVDCEGD 805
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|425437168|ref|ZP_18817593.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
gi|389677887|emb|CCH93205.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
Length = 795
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/764 (56%), Positives = 554/764 (72%), Gaps = 56/764 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGSGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITADP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPT-----LEEYGTN 186
E +AA++L G D +R +++ GE A G G ++ T L +YG N
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLLKNAGEKV-ASGRLTGDSDYKDQKNTPQGGILAQYGRN 175
Query: 187 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 246
L++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLAQRI SGD
Sbjct: 176 LSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLAQRIHSGD 235
Query: 247 VPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 306
+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GAG+
Sbjct: 236 IPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGSIILFIDEIHTLVGAGS 295
Query: 307 AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 366
GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++ I+
Sbjct: 296 MGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQAIE 355
Query: 367 ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 426
IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 356 ILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQ 415
Query: 427 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 486
+ E+ +E I E +L+
Sbjct: 416 SKSPAEVSEESPLINPE----------------------------SLI------------ 435
Query: 487 AGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRA 546
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+SRA
Sbjct: 436 -----PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLESQLHERIIGQQEAVNAVSRA 490
Query: 547 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 606
IRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME HTV
Sbjct: 491 IRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHTV 550
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
SKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDGRLTDS+
Sbjct: 551 SKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSQ 610
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 726
GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+ELKQYFRPE
Sbjct: 611 GRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDELKQYFRPE 670
Query: 727 FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSY 786
FLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+ EGY+PSY
Sbjct: 671 FLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDPSY 730
Query: 787 GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
GARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 731 GARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRAGHSVVGTEHLLLGLIGEATAAAALILKDL 52
>gi|296130887|ref|YP_003638137.1| ATPase AAA-2 domain-containing protein [Cellulomonas flavigena DSM
20109]
gi|296022702|gb|ADG75938.1| ATPase AAA-2 domain protein [Cellulomonas flavigena DSM 20109]
Length = 858
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/742 (58%), Positives = 575/742 (77%), Gaps = 26/742 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLNKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
++V G+ A G G SG+ + L+++G NLT+ A +GKLDPV+GR+ +IERV+
Sbjct: 140 QLVSGYQGKEPVASGGPAEGQPSGSAV--LDQFGRNLTQAARDGKLDPVIGREKEIERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+
Sbjct: 318 ATTLDEYRKYVEKDPALERRFQPIQVSEPNLQHAIEILKGLRDRYEAHHRVSITDAALVA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +Y++DR+LPDKAIDL+DEAG+R+R+R P E REL++++ + ++K A+
Sbjct: 378 AATLADRYVNDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDEQIAETRRDKESAIDE 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L + V+K K + +A V EVD I +++ T
Sbjct: 438 QDFEKAARLRDQEKQLGLK---RVEKEKAWKNGDMDA------VAEVDEELIAEVLANAT 488
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL MEE LHKRV+GQ+ A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 489 GIPVFKLTEEESSRLLHMEENLHKRVVGQNAAIKALSQAIRRTRAGLKDPKRPGGSFIFA 548
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 549 GPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTE 608
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR +DFKNT++IMT+N+G+
Sbjct: 609 KVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVIDFKNTVIIMTTNLGTRD 668
Query: 688 IEKG---GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I KG G + G +L D Y R+K+ V +ELK +FRPEFLNR+D+++VF QL++ E
Sbjct: 669 IAKGVMTGFQAGGELATD-----YERMKAKVNDELKTHFRPEFLNRVDDVVVFPQLSQPE 723
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+M+ ++ RL+ KD+ +++T ++ + E GY+P GARPLRRAI R +ED+++
Sbjct: 724 IFQIVDLMIAKLDARLRDKDMSIEITPAAKKLLAERGYDPVLGARPLRRAIQREIEDTLS 783
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L E+K G +VIVD +G
Sbjct: 784 EKILFGELKAGQTVIVDAQGEG 805
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++GE +A
Sbjct: 61 AQVQEIIGEGQQA 73
>gi|425462781|ref|ZP_18842248.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|389824116|emb|CCI27215.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
Length = 795
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/766 (56%), Positives = 555/766 (72%), Gaps = 60/766 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGSGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITADP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG----NKMP---TLEEYG 184
E +AA++L G D +R +++ GE V +G SS P L +YG
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLLKNAGEK---VASGRFTASSDYEDQKNAPQGGILAQYG 173
Query: 185 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 244
NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLAQRI S
Sbjct: 174 RNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLAQRIHS 233
Query: 245 GDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 304
GD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GA
Sbjct: 234 GDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIHTLVGA 293
Query: 305 GAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 364
G+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++
Sbjct: 294 GSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQA 353
Query: 365 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHA 424
I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 354 IEILRGLKATYEDFHQVKYDQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRTHLRYS 413
Query: 425 QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 484
+ E+ +E I E +L+
Sbjct: 414 LQSKSPAEVSEESPLINPE----------------------------SLI---------- 435
Query: 485 TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAIS 544
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+S
Sbjct: 436 -------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEAVNAVS 488
Query: 545 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 604
RAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME H
Sbjct: 489 RAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESH 548
Query: 605 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 664
TVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDGRLTD
Sbjct: 549 TVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTD 608
Query: 665 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR 724
S+GR VDFKNTL+IMTSN+GS VIEKGG+ +GF++ D S Y +I + VTEELKQYFR
Sbjct: 609 SQGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEMADDFAQSRYQQISNRVTEELKQYFR 668
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+ EGY+P
Sbjct: 669 PEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDP 728
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
SYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 729 SYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRAGHSVVGTEHLLLGLIGEATAAAALILKDL 52
>gi|331268385|ref|YP_004394877.1| ATPase AAA-2 domain-containing protein [Clostridium botulinum
BKT015925]
gi|329124935|gb|AEB74880.1| ATPase AAA-2 domain protein [Clostridium botulinum BKT015925]
Length = 813
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/712 (56%), Positives = 551/712 (77%), Gaps = 7/712 (0%)
Query: 114 GHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS 173
HNYI EH+LL +++E EGVA +L NL + ++ ++++ S+ + + +
Sbjct: 101 NHNYITPEHILLAMIKESEGVAYAILNNLNVNFEKLQKELLKDSNLSSGKMVSEKMEKNI 160
Query: 174 GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTA 233
+ PTL++YG +LT +A +GKLDPV+GR + ERV++IL RR KNNPCLIG+PGVGKTA
Sbjct: 161 SHNTPTLDKYGRDLTNMAIDGKLDPVIGRDSETERVLEILCRRIKNNPCLIGDPGVGKTA 220
Query: 234 IAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIIL 293
IAEGLAQRI SG++P+ ++ K+V+TLD+ +VAG+KYRGEFE+R+KK+M+EI + +IL
Sbjct: 221 IAEGLAQRIVSGNIPEILKDKRVVTLDISSMVAGSKYRGEFEDRVKKVMDEIYKDGNVIL 280
Query: 294 FIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQP 353
FIDE+HT++GAG AEGAIDA+NILKP+LARGELQCIGATT+DEYRK+IEKD ALERRFQP
Sbjct: 281 FIDEIHTIVGAGGAEGAIDASNILKPALARGELQCIGATTIDEYRKYIEKDSALERRFQP 340
Query: 354 VKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLID 413
V V EP+ +E+IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAIDLID
Sbjct: 341 VNVGEPTKEESIQILKGLRDKYEAHHGVKITDEAIQAAVELSDRYITDRYLPDKAIDLID 400
Query: 414 EAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISAL 473
EAG++VR+++ P + + LE+EL ++ KEK +A+ QDFEKA LRD E +LK ++
Sbjct: 401 EAGAKVRIKNLTAPPDLKGLEEELEKVGKEKEDAITVQDFEKAASLRDTEKELKDKLKDF 460
Query: 474 VDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRV 533
+ K+ S+ T+ +V++ I +VS W+ +P+EK++ E+DRLLK+EE LHKRV
Sbjct: 461 KNNWKKKSQVATQ------IVSKEQIAQVVSTWSNVPIEKLTEKEADRLLKLEEILHKRV 514
Query: 534 IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMI 593
IGQ+EAVK+I++A+RRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E MI
Sbjct: 515 IGQNEAVKSIAKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMI 574
Query: 594 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 653
R+DMSE+ME+H VS+L+GSPPGYVG+ EGGQLTE VRR PY+VVLFDEIEKAHP+VFN++
Sbjct: 575 RVDMSEYMEKHAVSRLVGSPPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNIL 634
Query: 654 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 713
LQILEDGRLTDSKG+TVDF+NT++I+TSNVG+S I K +GF DE + Y R+K
Sbjct: 635 LQILEDGRLTDSKGKTVDFRNTIIILTSNVGASTINKQN-TLGFSNSEDEAEDEYERMKD 693
Query: 714 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERF 773
V ELK+ FRPEFLNR+D++IVF L + ++KEI +ML+EV RLK +++ ++ E+
Sbjct: 694 NVMVELKRSFRPEFLNRIDDIIVFHTLNQEDLKEIVKLMLEEVSGRLKNREVYIEFDEKA 753
Query: 774 RERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 825
+ + +G++ +YGARPLRR I + +ED ++E++L IK+GD V V D
Sbjct: 754 EKLLSSKGFDSAYGARPLRRTITKTVEDKLSEEILKGIIKKGDHVKATVKDD 805
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF RFTE+A KV+ AQE A+ H Y+G+EH+LLG+L+E EG++ ++L + + ++
Sbjct: 2 MFGRFTERAQKVLYYAQEAAQIFKHGYVGTEHILLGILKEDEGISKKLLNEMNVNEESV 60
>gi|114567873|ref|YP_755027.1| ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338808|gb|ABI69656.1| ATPases with chaperone activity, ATP-binding subunit
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 828
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/740 (57%), Positives = 569/740 (76%), Gaps = 23/740 (3%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KV LA +EAR G NY+G+EHLLL +LRE EGVA +VL ++G IR QV+
Sbjct: 84 TPRAKKVFNLAFDEARLQGVNYVGTEHLLLAVLREEEGVAGQVLHSMGVKLDQIREQVML 143
Query: 156 MVGESTEAV----GAGVGGGSSGN---------KMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++G + A S N K PTL+ + +LT+ A EG+LDPV+GR
Sbjct: 144 LLGGDVSSTYHNPNAYQDTASQPNQQARKRARSKTPTLDSFSRDLTQDASEGRLDPVIGR 203
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+IERV+QIL RRTKNNP LIG+PGVGKTAI EGLAQRI +P+ + K+V+ LD+
Sbjct: 204 NNEIERVIQILSRRTKNNPVLIGDPGVGKTAIVEGLAQRIMDNQIPEILSNKRVVALDLS 263
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
+VAGTKYRGEFEERL +++ EIK S ++I+FIDE+HT++GAGAAEGAIDAANILKPSLA
Sbjct: 264 AMVAGTKYRGEFEERLTRIVNEIKSSGDVIVFIDELHTIVGAGAAEGAIDAANILKPSLA 323
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGE QC+GATTL+EYRKH+EKD ALERRFQP+ V EPS++E+I+ILKGLR+RYE HH ++
Sbjct: 324 RGEFQCVGATTLNEYRKHVEKDAALERRFQPILVEEPSIEESIEILKGLRDRYEAHHGVK 383
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
DEA+ +AA+LS +YISDRFLPDKAIDLIDEA SRVRL + +PE+ ++ E +L + K
Sbjct: 384 IGDEAIEAAAKLSARYISDRFLPDKAIDLIDEASSRVRLANYIIPEDLKKKESQLEDLIK 443
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAET-EAGDVGPVVTEVDIQH 501
EK EA+ GQ++EKA LRD E L+ +I ++ KE S + AG VG E +I
Sbjct: 444 EKEEAINGQEYEKAARLRDEEQKLRDEIE---NERKEWSSQRSLNAGSVG----EDEIAA 496
Query: 502 IVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPI 561
+VS+W+GIPV K++ +ES+RL++ME+ LH+RVIGQ+EAVKA+SRA+RRAR GLKNP RPI
Sbjct: 497 VVSSWSGIPVNKLAEEESERLVQMEDVLHQRVIGQEEAVKAVSRAVRRARAGLKNPKRPI 556
Query: 562 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 621
SF+F GPTGVGK+ELA++LA FGSE+A+IRLDMSE+ME+H VS++IGSPPGYVGY E
Sbjct: 557 GSFVFLGPTGVGKTELARSLAEAMFGSEDAIIRLDMSEYMEKHAVSRMIGSPPGYVGYDE 616
Query: 622 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 681
GGQLTE VRR+PY+V+L DEIEKAHPDVFN++LQ++EDGRLTD +GRTVDF+NT++IMTS
Sbjct: 617 GGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVMEDGRLTDGQGRTVDFRNTVVIMTS 676
Query: 682 NVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLT 741
NVG+ I K +++GF DE Y+++K V E+LK F+PEF+NR+DE+IVF+ L
Sbjct: 677 NVGADSI-KNSKKVGFTRAIDEA-HDYSQMKERVMEQLKHTFKPEFMNRIDEIIVFQNLN 734
Query: 742 KLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 801
+ E+KEI D++L ++ +R+K ++++ RE +++EGY+P++GARPL+RAI +L+ED
Sbjct: 735 EQELKEIVDLLLLDLKERVKENGYGMEISPAARELILKEGYDPAFGARPLKRAIQKLVED 794
Query: 802 SMAEKMLAREIKEGDSVIVD 821
S++E++L + + GD ++VD
Sbjct: 795 SISEEILKKNLLPGDKILVD 814
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFT++A ++ AQEEAR+L H IG+EH+LLGLLREGEGV AR L N G D +R
Sbjct: 1 MFRRFTQRARNAVIHAQEEARQLNHPAIGTEHILLGLLREGEGVGARALLNSGIDLEKVR 60
Query: 151 TQVIRMVGESTEAV 164
++ R++G + EAV
Sbjct: 61 EEINRVIGANGEAV 74
>gi|452960301|gb|EME65629.1| DNA binding ATP-dependent peptidase [Rhodococcus ruber BKS 20-38]
Length = 841
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/737 (56%), Positives = 566/737 (76%), Gaps = 20/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ + G G + + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPQESGTSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD+ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDKALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 AASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + AGD+ V+ EVD I +++ WT
Sbjct: 440 QDFEKAANLRDKEKQLVAQ--------RAEREKQWRAGDL-DVIAEVDEEQIAEVLANWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPAGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G++
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTAD 670
Query: 688 IEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +G +S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 671 ISKA---VGLGFTKGTGAESNYERMKLKVNDELKKHFRPEFLNRIDDIIVFHQLTQEQII 727
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
E+ D+M+ V +LK KD+ +++TE + + + G++P GARPLRR I R +ED ++EK
Sbjct: 728 EMVDLMIGRVEVQLKNKDMGIELTETAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEK 787
Query: 807 MLAREIKEGDSVIVDVD 823
+L EI G V+VDV+
Sbjct: 788 ILFNEIGPGQIVLVDVE 804
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|332671844|ref|YP_004454852.1| ATPase AAA-2 domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332340882|gb|AEE47465.1| ATPase AAA-2 domain protein [Cellulomonas fimi ATCC 484]
Length = 860
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/742 (58%), Positives = 578/742 (77%), Gaps = 26/742 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLNKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
++V G+ A G G SG+ + L+++G NLT+ A +GKLDPV+GR+ +IERV+
Sbjct: 140 QLVSGYQGKEPVAAGGPQEGQPSGSAV--LDQFGRNLTQAARDGKLDPVIGREKEIERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP++V EP++ I+ILKGLR+RYE HH++ TD ALV+
Sbjct: 318 ATTLDEYRKYVEKDPALERRFQPIQVAEPNLQHAIEILKGLRDRYEAHHRVSITDAALVA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +Y++DR+LPDKAIDL+DEAG+R+R+R P E REL++++ + ++K A+
Sbjct: 378 AATLADRYVNDRYLPDKAIDLVDEAGARLRIRRMTAPPELRELDEQIAETRRDKESAIDE 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD E L K +E KA ++GD+ V EVD I +++ T
Sbjct: 438 QDFEKAARLRDAEKQLGL-------KRQEKEKA-WKSGDL-DAVAEVDEELIAEVLANAT 488
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LHKRV+GQD A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 489 GIPVFKLTEEESSRLLRMEDELHKRVVGQDAAIKALSQAIRRTRAGLKDPKRPGGSFIFA 548
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 549 GPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYDEGGQLTE 608
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 609 KVRRRPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 668
Query: 688 IEKG---GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I KG G + G DL +SY R+K+ V +ELK +FRPEFLNR+D+++VF QL++ E
Sbjct: 669 IAKGLQTGFQAGGDL-----STSYERMKAKVNDELKTHFRPEFLNRVDDVVVFPQLSQPE 723
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ I D+M+ ++ RL+ KD+ +++T ++ + E+GY+P GARPLRRAI R +ED+++
Sbjct: 724 IFAIVDLMVAKLDKRLRDKDMGIELTPAAKKLLSEKGYDPVLGARPLRRAIQRDIEDTLS 783
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L E+K G V+VD + +G
Sbjct: 784 EKILFGELKAGQLVVVDAEGEG 805
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++GE +A
Sbjct: 61 AQVQEIIGEGQQA 73
>gi|299830407|ref|YP_003734622.1| Clp protease ATP binding subunit [Kryptoperidinium foliaceum]
gi|297385109|gb|ADI40407.1| Clp protease ATP binding subunit [Kryptoperidinium foliaceum]
Length = 915
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/775 (54%), Positives = 562/775 (72%), Gaps = 45/775 (5%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT +A +V+ +A E + LG N++G+EH+LL L+ E +GVA R L+
Sbjct: 68 GRGTGFVASEI--PFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALIAESDGVAMRTLD 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGG--------SSGNKMPTLEEYGTNLTKLAE 192
L D +R ++ + E+ E + + G+ PTL+EY N+TK A
Sbjct: 126 KLNVDIQKLRNLILTYIEETQEEILRPLTQAEKFLLEREKKGSPTPTLDEYAENITKEAI 185
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+G LDPV+GR+ +I+ V+ +L RRTKNNP LIGEPGVGKTA+AEGLAQ I + VPD ++
Sbjct: 186 DGNLDPVIGREKEIDDVIAVLARRTKNNPVLIGEPGVGKTAVAEGLAQLILTEKVPDFLD 245
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
G ++ LD+G ++AGTKYRGEFEERLK+++EE + +I+ IDE+HTL+GAGAAEGA+D
Sbjct: 246 GSLIMALDLGSILAGTKYRGEFEERLKRIVEEAQNDSAVIIVIDEIHTLVGAGAAEGAVD 305
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQPV V EPSV TI+IL+GLR
Sbjct: 306 AANILKPALARGKFRCIGATTNDEYRKYIERDPALERRFQPVHVEEPSVGTTIEILRGLR 365
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
++E HH L Y D+AL AA LS +Y++DR+LPDKAID++DEAG+RVRL + +LP R
Sbjct: 366 SKFEQHHTLSYHDKALEQAAILSDKYVADRYLPDKAIDVLDEAGARVRLENRRLPLGLRS 425
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI-----SALVDKGKEMSKAETEA 487
L EL++ K+K E ++ DFE A +L D EM+++ I SAL ++ + ++ + +
Sbjct: 426 LMHELQETIKDKEECIKEHDFEAAKQLLDHEMEVRTHIRIMKQSALTNEARGFNRRDVD- 484
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
+VTE D+ ++S WTGIPV K++ ES+RLLKME+T+H+R+IGQ AV A+S+AI
Sbjct: 485 -----MVTETDVSDVISNWTGIPVTKITGSESERLLKMEDTIHERIIGQKHAVVAVSKAI 539
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGL+NPNRPIASFIF+GPTGVGK+EL KAL+ Y F SE++MIRLDMSE+ME+HTV+
Sbjct: 540 RRARVGLRNPNRPIASFIFAGPTGVGKTELTKALSDYMFSSEDSMIRLDMSEYMEKHTVA 599
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPDVFN++LQIL+DGRLTDSKG
Sbjct: 600 KLIGSPPGYVGYNEGGQLTEAVRSKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKG 659
Query: 668 RTVDFKNTLLIMTSNVGSSVIEK----------GGRRIGFDLDYDE-----------KDS 706
R +DF NTL+IMT+N+G+ +IE+ G R GF + D KD
Sbjct: 660 RVIDFTNTLIIMTTNLGAKIIERESGIKAKSDQGDR--GFKITPDAVLGWEPVPEPIKDP 717
Query: 707 S-YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 765
+ R+ LV EELK +FRPEFLNR+DE+IVF LT++++ EI ++ +K V RLK K I
Sbjct: 718 ELFERVAKLVNEELKNFFRPEFLNRIDEIIVFNHLTRIDIWEICELQIKSVQKRLKEKGI 777
Query: 766 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
L V + + +EGY+P YGARPLRRAIM+ LED++AE+ L++ + +IV
Sbjct: 778 NLIVDLAVQAFLTDEGYDPIYGARPLRRAIMKYLEDTLAEQCLSKTLYPNTKIIV 832
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE+FTE AIKVIML+QEEARR+GHN++G+E LLLG++ + G+ AR L+ L R
Sbjct: 1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGVIGQRHGIGARALKKLKVTLKKAR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
++ +G T V + +
Sbjct: 61 KEIELYIGRGTGFVASEI 78
>gi|365868512|ref|ZP_09408063.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|397678519|ref|YP_006520054.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense str. GO 06]
gi|418252108|ref|ZP_12878120.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|419710796|ref|ZP_14238260.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|419713561|ref|ZP_14240985.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|420878246|ref|ZP_15341613.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|420935189|ref|ZP_15398459.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|420950195|ref|ZP_15413442.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|420995114|ref|ZP_15458260.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|420996080|ref|ZP_15459223.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|421047351|ref|ZP_15510349.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353448368|gb|EHB96773.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|364000603|gb|EHM21801.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|382939686|gb|EIC64012.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|382946259|gb|EIC70545.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|392083155|gb|EIU08980.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|392146696|gb|EIU72417.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|392165281|gb|EIU90968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|392181216|gb|EIV06868.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|392191900|gb|EIV17525.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|392243903|gb|EIV69386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898]
gi|395456784|gb|AFN62447.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense str. GO 06]
Length = 844
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E +G GG P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAESGTGGRGGEAGTPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKNKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD E L AQ + D+ K+ +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAARLRDSEKQLVAQRA---DREKQW-----RSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPRRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 671 SDISKA---VGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFEQLTQEQI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LKTKD+ +++T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 728 IEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G+ V VDV++
Sbjct: 788 KILFNEVGPGELVTVDVEN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|418418717|ref|ZP_12991902.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
gi|364001890|gb|EHM23082.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
Length = 823
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E +G GG P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKETAESGTGGRGGEAGTPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKNKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAL 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD E L AQ + D+ K+ +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAARLRDSEKQLVAQRA---DREKQW-----RSGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPRRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 650 SDISKA---VGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFEQLTQEQI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LKTKD+ +++T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 707 IEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSE 766
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G+ V VDV++
Sbjct: 767 KILFNEVGPGELVTVDVEN 785
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|148655866|ref|YP_001276071.1| ATPase [Roseiflexus sp. RS-1]
gi|148567976|gb|ABQ90121.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 845
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/754 (57%), Positives = 551/754 (73%), Gaps = 39/754 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI A EEA+RL H+YIG+EHLLLGL+R GEGVA VL+ LG +RT V+
Sbjct: 84 LTARAKKVIAYAVEEAKRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRTNVM 143
Query: 155 RMVGESTEAVGAGVGGGSSGN-------------KMPTLEEYGTNLTKLAEEGKLDPVVG 201
R++ + GAG G G K P L+ GT+LT++AE G+LDPV+G
Sbjct: 144 RVLRQ-----GAGAGLERPGTVSSGSSQSSQRQSKTPYLDALGTDLTEMAEAGRLDPVIG 198
Query: 202 RQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 261
RQ +IERV+QIL RRTKNNP LIGEPGVGKTAI EGLAQRI +GDVPD+I+GK+V+TLDM
Sbjct: 199 RQHEIERVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVAGDVPDSIKGKRVVTLDM 258
Query: 262 GLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSL 321
G LVAGTKYRG+FEERLK++++EIK++ ILFIDE HT+IGAG AEG +DAANILKP+L
Sbjct: 259 GALVAGTKYRGQFEERLKRVVDEIKET-RCILFIDEFHTIIGAGGAEGTLDAANILKPAL 317
Query: 322 ARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKL 381
+RGELQ IGATTLDEYRK+IE+D ALERRFQPV V +P+ +ETI+IL+G++ RYE H+L
Sbjct: 318 SRGELQTIGATTLDEYRKYIERDAALERRFQPVMVEQPTEEETIEILRGIKSRYEDFHQL 377
Query: 382 RYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT 441
+ +DEA+ +AA LS +Y+ DRFLPDKAIDLIDEA +RVR+ + P R+ + L I
Sbjct: 378 QISDEAIKAAAHLSARYVPDRFLPDKAIDLIDEAAARVRMTRSATPPSLRDALRGLEAIR 437
Query: 442 KEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG--------PV 493
KE+ A+ Q FE A +LR+RE + A+I K E E G +G P
Sbjct: 438 KEREAAIEDQQFELAADLREREERMLARIQ----------KIEAELG-IGSDAHLMERPY 486
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
VTE DI +V WTGIPV+++ DE+ RLL+MEE LH RVIGQ EA+ IS+++RRAR G
Sbjct: 487 VTEDDIAEVVGMWTGIPVKRLKGDETTRLLQMEEYLHSRVIGQHEAIVTISKSVRRARAG 546
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LK+P RPI SFIF GPTGVGK+ELAKALA + FGSEE +I++DMSEF ERHT S+L+GSP
Sbjct: 547 LKDPKRPIGSFIFLGPTGVGKTELAKALAEFMFGSEEHLIKIDMSEFQERHTTSRLVGSP 606
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGY EGGQLT+AVRR+PY+VVLFDEIEKAHPD FN++LQ+LEDG LTD KGR VDF+
Sbjct: 607 PGYVGYGEGGQLTDAVRRKPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFR 666
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 733
NT++IMTSNVG+ I + RIGF + I+ V + LKQ FRPEFLNR+D
Sbjct: 667 NTIIIMTSNVGTEHIRRAS-RIGFSGYSSGSELDNEDIRKKVDDALKQLFRPEFLNRIDA 725
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
I+F LT E+++I +MLK V D+LK ++ L++T+ + + + GY+P+YGARPLRR
Sbjct: 726 TIIFHALTNDEIRQITRLMLKRVQDQLKEHNLTLEITDEACDLLAKRGYDPAYGARPLRR 785
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 827
I L+ED ++E +L + GD V+VDV + N
Sbjct: 786 IITNLIEDPLSEGVLEGRFRSGDRVLVDVATLDN 819
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++FT++A +V+ +A EEAR H YIG+EHLLLGL+REGEGVAARVL+ LG R
Sbjct: 6 FDKFTKRAKQVLQIATEEARAFNHPYIGTEHLLLGLIREGEGVAARVLDELGVKLVQARH 65
Query: 152 QVIRMVG 158
V +VG
Sbjct: 66 AVEFIVG 72
>gi|414579681|ref|ZP_11436824.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|420886598|ref|ZP_15349958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|420889758|ref|ZP_15353106.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|420892602|ref|ZP_15355946.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|420899862|ref|ZP_15363193.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|420908077|ref|ZP_15371395.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|420934689|ref|ZP_15397962.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|420939997|ref|ZP_15403264.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|420945254|ref|ZP_15408507.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|420959184|ref|ZP_15422418.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|420960066|ref|ZP_15423297.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
gi|420970045|ref|ZP_15433246.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|421000598|ref|ZP_15463731.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392082361|gb|EIU08187.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|392087506|gb|EIU13328.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|392097223|gb|EIU23017.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|392105981|gb|EIU31767.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|392108483|gb|EIU34263.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|392124205|gb|EIU49966.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|392133101|gb|EIU58846.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|392156859|gb|EIU82557.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|392158462|gb|EIU84158.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|392175983|gb|EIV01644.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|392202752|gb|EIV28348.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392248910|gb|EIV74386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|392257278|gb|EIV82732.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
Length = 823
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E +G GG P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKETAESGTGGRGGEAGTPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKNKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAL 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD E L AQ + D+ K+ +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAARLRDSEKQLVAQRA---DREKQW-----RSGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPRRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 650 SDISKA---VGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFEQLTQEQI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LKTKD+ +++T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 707 IEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSE 766
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G+ V VDV++
Sbjct: 767 KILFNEVGPGELVTVDVEN 785
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|169627650|ref|YP_001701299.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus ATCC 19977]
gi|420862333|ref|ZP_15325729.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|420866918|ref|ZP_15330305.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|420876221|ref|ZP_15339597.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|420913205|ref|ZP_15376517.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|420919524|ref|ZP_15382823.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|420925292|ref|ZP_15388581.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|420964834|ref|ZP_15428051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
gi|420975640|ref|ZP_15438826.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|420981019|ref|ZP_15444192.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|421005578|ref|ZP_15468696.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|421011064|ref|ZP_15474163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|421016167|ref|ZP_15479237.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|421021609|ref|ZP_15484661.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|421027390|ref|ZP_15490429.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|421039150|ref|ZP_15502161.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|421046568|ref|ZP_15509568.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|169239617|emb|CAM60645.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus]
gi|392067696|gb|EIT93544.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|392075249|gb|EIU01083.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|392077494|gb|EIU03325.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|392115199|gb|EIU40968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|392135367|gb|EIU61107.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|392140949|gb|EIU66675.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|392173585|gb|EIU99252.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|392176817|gb|EIV02475.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|392204370|gb|EIV29958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|392213495|gb|EIV39051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|392217460|gb|EIV42996.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|392217638|gb|EIV43172.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|392227364|gb|EIV52878.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|392233350|gb|EIV58849.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|392236021|gb|EIV61519.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|392258368|gb|EIV83814.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
Length = 844
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E +G GG P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAESGTGGRGGEAGTPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKNKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD E L AQ + D+ K+ +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAARLRDSEKQLVAQRA---DREKQW-----RSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPRRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 671 SDISKA---VGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFEQLTQEQI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LKTKD+ +++T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 728 IEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G+ V VDV++
Sbjct: 788 KILFNEVGPGELVTVDVEN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|420914407|ref|ZP_15377714.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|420987968|ref|ZP_15451124.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|421034730|ref|ZP_15497751.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
gi|392125407|gb|EIU51163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|392182247|gb|EIV07898.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|392228051|gb|EIV53564.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
Length = 823
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E +G GG P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKETAESGTGGRGGEAGTPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKNKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAL 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD E L AQ + D+ K+ +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAARLRDSEKQLVAQRA---DREKQW-----RSGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPRRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ ++
Sbjct: 650 SDISKA---VGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFEQLTQEQI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
E+ D+M+ V +LKTKD+ +++T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 707 IEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSE 766
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G+ V VDV++
Sbjct: 767 KILFNEVGPGELVTVDVEN 785
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|357390336|ref|YP_004905176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kitasatospora
setae KM-6054]
gi|311896812|dbj|BAJ29220.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Kitasatospora setae KM-6054]
Length = 838
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/740 (58%), Positives = 571/740 (77%), Gaps = 18/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ ++T A GG + G +L +++G NLT+ A E KLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQTTGKESATAGGPAEGTPSTSLVLDQFGRNLTQAAREAKLDPVIGREKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKQLYTLDLGALVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 320 ATTLDEYRKHLEKDAALERRFQPIQVAEPSLAHTIEILKGLRDRYEAHHRVSITDAALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE ++++ + +EK A+
Sbjct: 380 AATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD E L + K + E +AGD+ VV EVD I +++ T
Sbjct: 440 QDFEKAASLRDNEKQLL--------QAKAKREKEWKAGDM-DVVAEVDEELIAEVLATAT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LHKRVIGQ++A+KA+S+AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEESSRLLRMEDELHKRVIGQEDAIKALSQAIRRTRAGLKDPKRPGGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+K LA + FG E+A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKTLAEFLFGDEDALIALDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDE+EKAHPD+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 KVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K G +GF D + + Y R+K+ V EELKQ+FRPEFLNR+D+++VF QL++ + E
Sbjct: 671 ISK-GFNLGFAATGDVQ-AGYERMKAKVGEELKQHFRPEFLNRVDDIVVFHQLSEANIIE 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ V R+K +D+ ++++ + + + GY+P GARPLRR I R +ED ++EK+
Sbjct: 729 IVDLMIARVDQRMKDRDMGIELSPEAKSLLAKRGYDPILGARPLRRTIQREIEDHLSEKI 788
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E++ G V+V V+ +G
Sbjct: 789 LFGELRSGHIVVVGVEGEGK 808
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|375139363|ref|YP_005000012.1| chaperone ATPase [Mycobacterium rhodesiae NBB3]
gi|359819984|gb|AEV72797.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
rhodesiae NBB3]
Length = 847
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDPAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IQMVDLMIGRVEKQLKAKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQLVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|54022379|ref|YP_116621.1| Clp protease [Nocardia farcinica IFM 10152]
gi|54013887|dbj|BAD55257.1| putative Clp protease [Nocardia farcinica IFM 10152]
Length = 851
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/736 (57%), Positives = 566/736 (76%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGG--GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E V +G G G+ + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPVESGARGETGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTINILKGLRDRYEAHHRVSITDGALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 379 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E LV K E K + +GD+ VV EVD I +++ WT
Sbjct: 439 QDFEKAARLRDKE-------KQLVAKRAEREK-QWRSGDL-DVVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF +E S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT ++ E
Sbjct: 670 ISK-AVGLGFSQSNNE-GSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTNEQIVE 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+ +++T + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMIGRVATQLKNKDMAIELTPTAKNLLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L EI G +++VDV+
Sbjct: 788 LFGEIGPGQTILVDVE 803
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|379706683|ref|YP_005261888.1| protein disaggregation chaperone [Nocardia cyriacigeorgica GUH-2]
gi|374844182|emb|CCF61244.1| protein disaggregation chaperone [Nocardia cyriacigeorgica GUH-2]
Length = 830
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/736 (57%), Positives = 566/736 (76%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGG--GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E V +G G G+ + L+++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 119 QLLSGYQGKEPVESGARGETGTPSTSL-VLDQFGRNLTQAALEGKLDPVIGRSKEIERVM 177
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 178 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 237
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 238 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 297
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI ILKGLR+RYE HH++ TD ALV+
Sbjct: 298 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTINILKGLRDRYEAHHRVSITDGALVA 357
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 358 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 417
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E LV K E K + +GD+ VV EVD I +++ WT
Sbjct: 418 QDFEKAARLRDKE-------KQLVAKRAEREK-QWRSGDL-DVVAEVDDEQIAEVLANWT 468
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 469 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFA 528
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 529 GPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 588
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 589 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 648
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF + + S+Y R+K V +ELK++FRPEFLNR+D++IVF QLT ++ E
Sbjct: 649 ISK-AVGLGFS-QSNAEGSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQLTTEQIVE 706
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +LK KD+ L+++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 707 MVDLMIARVEKQLKNKDMALELSANAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 766
Query: 808 LAREIKEGDSVIVDVD 823
L EI G +V VDV+
Sbjct: 767 LFGEIGPGQTVSVDVE 782
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|392423650|ref|YP_006464644.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus acidiphilus SJ4]
gi|391353613|gb|AFM39312.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus acidiphilus SJ4]
Length = 813
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/737 (58%), Positives = 562/737 (76%), Gaps = 15/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +V+ LA EEA R NYIG+EH+LLGL+ EGEG+AAR+L NL +P + QV+
Sbjct: 79 LTPRVKRVLELANEEAHRQDVNYIGTEHILLGLIMEGEGIAARILANLNVNPERVWKQVV 138
Query: 155 RMVGESTE--AVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++G E V G S N P+L E+G +LT+ A EG+LDPV+GR+ +IER
Sbjct: 139 KLLGGELEESPVPPSNSGPVSKNGGPANTPSLNEFGRDLTQQAREGRLDPVIGREKEIER 198
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTAIAEGLAQ I + VP+ + K+VITLD+ +VAG+
Sbjct: 199 VIQVLSRRTKNNPALIGEPGVGKTAIAEGLAQGIINNRVPEILINKRVITLDLSAMVAGS 258
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERLKK+M+EI+ IILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQC
Sbjct: 259 KYRGEFEERLKKVMDEIRADGNIILFIDELHTLIGAGAAEGAIDAANILKPALARGELQC 318
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK+IEKD ALERRFQP+ V EP+V+E I IL+GLR+RYE HH+++ TDEA+
Sbjct: 319 IGATTLEEYRKYIEKDSALERRFQPITVSEPTVEEAILILRGLRDRYEAHHRVKITDEAI 378
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
SA +LS +Y+SDRFLPDKAIDL+DEA S+VRL P + + LE E+ ++ KEK AV
Sbjct: 379 ESAVRLSDRYVSDRFLPDKAIDLMDEAASKVRLTSYIAPPDLKSLEGEIERLKKEKEAAV 438
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
GQ+FEKA +LRD E LK +++ K+ + E++ +V E DI +V++WTG
Sbjct: 439 AGQEFEKAAQLRDSEHKLKEELA------KQREEWESKRQKENSMVLEDDIAQVVASWTG 492
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV+K++ ES+RLL +EE LHKRVIGQD+AV A++RA+RRAR GLK+P RPI SFIF G
Sbjct: 493 IPVKKLAQAESERLLNLEEILHKRVIGQDDAVTAVARAVRRARAGLKDPKRPIGSFIFLG 552
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+EL ++LA FG E+A+IR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQLTEA
Sbjct: 553 PTGVGKTELGRSLAEAMFGDEKALIRIDMSEYMEKHAVSRLVGAPPGYVGHDEGGQLTEA 612
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+PY+V+L DEIEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVGSS +
Sbjct: 613 VRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNTVIIMTSNVGSSFL 672
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K +GF DEK + Y ++ V EELK+ FRPEFLNR+DE++VF L K + +I
Sbjct: 673 RKEA--MGFAAQKDEK-TEYKNMRGQVMEELKRTFRPEFLNRIDELVVFHSLKKEHLAKI 729
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
+I+ ++ RLK +ELQ+ E + +EG +P++GARPLRR+I RL+ED+++EK+L
Sbjct: 730 TEILALQMNKRLKEYGLELQIDSSVIELIAKEGNDPTFGARPLRRSIQRLIEDALSEKIL 789
Query: 809 AREIKEGDSVIVDVDSD 825
E K GD + + D
Sbjct: 790 QGEFKVGDKICAQAEQD 806
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
R+TE+A KV+ +A+ EA+R+GH +G+EH+LLGL+ EGEG+AA+ L+ LG DP +RT V
Sbjct: 4 RYTERAEKVLTIAENEAKRMGHKVVGTEHILLGLIEEGEGIAAQALKGLGLDPVKVRTMV 63
Query: 154 IRMVG 158
+ G
Sbjct: 64 EEVTG 68
>gi|357420234|ref|YP_004933226.1| ATPase AAA [Thermovirga lienii DSM 17291]
gi|355397700|gb|AER67129.1| ATPase AAA-2 domain protein [Thermovirga lienii DSM 17291]
Length = 820
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/745 (56%), Positives = 575/745 (77%), Gaps = 16/745 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ +A +V+ LA EAR +G NY+G+EH+LLGL+ EGEG+A+++L++LG D +R +V
Sbjct: 81 LSPRAKRVLDLAMREARNMGVNYVGTEHMLLGLISEGEGIASQILQSLGLDLQKVRAEVK 140
Query: 155 RMVGESTEAVGAGVGG-------GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
++ + G+ ++ PTL++ G +LT++A+ G+LDPVVGR +I+
Sbjct: 141 TVLTNVEQGEEGEYREGGELQQKGAGRSRTPTLDQLGIDLTEMAQRGELDPVVGRTKEIQ 200
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
R++QIL RR KNNP LIG+PGVGKTAI EGLAQ++ SGDVP+ ++GK+V+ L++G LVAG
Sbjct: 201 RLIQILSRRKKNNPVLIGDPGVGKTAIVEGLAQKVISGDVPEVLKGKRVVQLNVGNLVAG 260
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
TKYRGEFEER++KL++E+++S +++LFIDE+HT++GAG AEGA+DAANILKPSLARGE Q
Sbjct: 261 TKYRGEFEERMRKLVKELRESKDVVLFIDEIHTIVGAGGAEGAVDAANILKPSLARGEFQ 320
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRKHIEKDPALERRFQPV+V EPSV+++I+IL+GLR+RYE HH+ + TDEA
Sbjct: 321 VIGATTLDEYRKHIEKDPALERRFQPVQVDEPSVEDSIKILEGLRDRYEAHHRAKITDEA 380
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
LV+AA+LS +YI++RFLPDKAIDLIDEA +R RL +LPE+ ++LE+EL + KEK A
Sbjct: 381 LVAAAKLSERYITERFLPDKAIDLIDEAAARARLNTMELPEDIKQLERELEALRKEKEAA 440
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
V Q+FEKA +RDRE L QI + + + K E PVV E I IVS WT
Sbjct: 441 VASQEFEKAAHIRDRERQLSKQIE--IKRQEWQVKRNNEE----PVVDEEQIAQIVSEWT 494
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV++++ +ES RLL+MEE +HKR++ Q +AV A++RAIRRAR GLK+P RPI SF+F
Sbjct: 495 GIPVQQLTEEESARLLRMEEEIHKRMVNQCDAVNAVARAIRRARSGLKDPKRPIGSFLFL 554
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELA++LA + FGSE+AM+R DMSE+MERH V+KLIG+PPGYVGY EGG+LTE
Sbjct: 555 GPTGVGKTELARSLAEFLFGSEDAMVRFDMSEYMERHEVAKLIGAPPGYVGYEEGGKLTE 614
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
A+RRRPY+VVLFDEIEKAHPDVFN++LQILEDGRLTD +G TVDF+N++++MTSNVG+
Sbjct: 615 ALRRRPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDGQGHTVDFRNSVIVMTSNVGAQD 674
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K R +GF +E N++K + E L++ FRPEFLNR+D++I+F+ L + E+ +
Sbjct: 675 LMK-TRSLGFSTSAEE-SFDLNKMKGSIMEALRKTFRPEFLNRVDDIIIFKPLGREELLQ 732
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DIMLKEV RLK + +E+ V + + ++E+GY+P YGARPLRR + R++ED MA+ +
Sbjct: 733 ILDIMLKEVETRLKEQGVEIVVPDETKAFLLEQGYDPKYGARPLRRTLQRMVEDKMADML 792
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLN 832
L +I +G + + V SDG + N
Sbjct: 793 LEGKISKGSKIEI-VVSDGELEFKN 816
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 54/68 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M++ FTE+ +VI LA +EA ++GH+ IG+EH+LLGLL EGEG+AARVL + G + ++R
Sbjct: 1 MWQFFTERGKRVIQLAHKEALKMGHDVIGTEHILLGLLAEGEGIAARVLMSFGVELDDVR 60
Query: 151 TQVIRMVG 158
T++ ++VG
Sbjct: 61 TRIEQVVG 68
>gi|383826095|ref|ZP_09981237.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
gi|383333857|gb|EID12305.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
Length = 850
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 568/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ+I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVHGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAAALRDREKQLVAQ--------RAEREKQWRSGDLD-VVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
+ I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 ADISKP---VGLGFSPGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQEEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ ++M+ V +LK+KD+ L++T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 728 IRMVELMISRVAAQLKSKDMTLELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDALSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|379745192|ref|YP_005336013.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
gi|378797556|gb|AFC41692.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 567/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDPAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M++ V ++LK+KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMIQRVGNQLKSKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|383782938|ref|YP_005467505.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
gi|381376171|dbj|BAL92989.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
Length = 840
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/738 (58%), Positives = 575/738 (77%), Gaps = 19/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A GA G + + L+++G NLT+ A EGKLDPV+GR+ +IERV+
Sbjct: 140 QLLSGYQGKEPAAAGAATGEAAPSTSL-VLDQFGRNLTQAAREGKLDPVIGREKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGL+Q I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLSQSIVKGEVPETLKDKQLYTLDLGALVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKH+EKD ALERRFQP++V EPS+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRISITDAALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YISDRFLPDKAIDLIDEAG+R+R+R P + R+ ++ + Q+ ++K A+
Sbjct: 379 AATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A +LRD+E L Q K + E +AGD+ VV+EVD I ++ WT
Sbjct: 439 QDFERAAQLRDKEKTLLNQ--------KAQREKEWKAGDL-DVVSEVDDEQIAEVLGNWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKRVIGQ++AV+A+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVQAVSKAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FGSE+A+I+LDMSEF +R+TVS+L+G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAHPDVFN +LQILEDGRLTD +GR VDFKNT++I+T+N+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHPDVFNTLLQILEDGRLTDGQGRIVDFKNTVIILTTNLGTRD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF E +SSY R+K V +ELKQ+FRPEFLNR+D+ IVF QL + E+ +
Sbjct: 670 VAK-AVSLGFQASEAE-ESSYERMKIKVNDELKQHFRPEFLNRIDDTIVFHQLREKEILQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DI + +LK KD+ L++T+ ++ + +G++P GARPLRR I R LED+++E++
Sbjct: 728 IVDIFTARIEGQLKNKDMGLELTDNAKKYLAAKGFDPVLGARPLRRTIQRELEDTLSEQI 787
Query: 808 LAREIKEGDSVIVDVDSD 825
L E++ G V+VD + D
Sbjct: 788 LFNELRPGQIVVVDCEGD 805
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|239623567|ref|ZP_04666598.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521598|gb|EEQ61464.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 876
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/747 (56%), Positives = 563/747 (75%), Gaps = 12/747 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +VI + EA R IG+EH+L+ +LREG+ VA+R+L +G + ++
Sbjct: 80 YTPRARRVIENSYREAVRFKAAQIGTEHILIAILREGDCVASRLLNTIGVSIQKLYIDLL 139
Query: 155 RMVGESTEAVGAGVG--GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+GE AV +G G GN PTL+ Y NLT+LA EG+LDPV+GR+ +I+RV+QI
Sbjct: 140 AAMGEDAPAVKDEIGAKGARKGNATPTLDSYSRNLTQLAAEGRLDPVIGREQEIQRVIQI 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNPCLIGEPGVGKTA+ EGLAQ I +G+VPDTI K+V+TLD+ +VAG+KYRG
Sbjct: 200 LSRRTKNNPCLIGEPGVGKTAVVEGLAQMITAGNVPDTIADKRVMTLDLSGMVAGSKYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFEER+KK++ E+ +S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGELQ IGAT
Sbjct: 260 EFEERIKKVISEVIESGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGELQLIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
T++EYRK+IEKD ALERRFQPV V EP+ +E+ ILKGLR RYE HHK+ TD+AL +A
Sbjct: 320 TINEYRKYIEKDSALERRFQPVTVDEPTEEESEAILKGLRSRYEEHHKVEITDDALAAAV 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YI+DRFLPDKAIDLIDEA SRVRL + P + ++ E E+ + + K EA++ +
Sbjct: 380 KLSSRYINDRFLPDKAIDLIDEASSRVRLMNYTKPAKIKDYEAEIDALEEGKEEAIKKEA 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
+EKAGE++ ++ L+ +I+ + M K + E VV+E +I +VS WT IPV
Sbjct: 440 YEKAGEIKKKQEKLREKIA------QTMEKWQKEKETRKLVVSENEIADVVSGWTKIPVR 493
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +ES+RL+ +E LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTGV
Sbjct: 494 KLAEEESERLMNLEGILHERVVGQEEAVTAISKAIRRGRVGLKDPGRPIGSFLFLGPTGV 553
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+EL+KAL+ FG+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR
Sbjct: 554 GKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRN 613
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY+V+LFDEIEKAHPDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I
Sbjct: 614 PYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-ISP 672
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+R+GF + D K + YN +K V +E+K+ F+PEFLNR+DE+IVF QLTK ++ IADIM
Sbjct: 673 KRLGFGMTSDAK-ADYNFMKDRVMDEVKRLFKPEFLNRIDEIIVFHQLTKEHIRGIADIM 731
Query: 753 LKEVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
L+ + R K + I+L VT+ RE ++++GY+ YGARPLRR I L+ED MAE+ML
Sbjct: 732 LRTIGKRSKEQLGIQLAVTDGAREYLIDKGYDDKYGARPLRRTIQNLVEDKMAEEMLDGS 791
Query: 812 IKEGDSVIVDVDSDGNVTVLNGSSGAP 838
IK GD+V VD D + +T S AP
Sbjct: 792 IKAGDTVTVDFDGE-KLTFKARSKAAP 817
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
ER+T +A + + LA E A L H Y+G+EHLL+GLL+EG GVAA+VL++ G + +
Sbjct: 1 MERYTPQAQEALGLAVEVAEGLNHGYVGTEHLLIGLLQEGTGVAAKVLDDNGVEEDRVTQ 60
Query: 152 QVIRMV 157
V +++
Sbjct: 61 LVSQLI 66
>gi|25029085|ref|NP_739139.1| endopeptidase Clp ATP-binding chain C [Corynebacterium efficiens
YS-314]
gi|259505920|ref|ZP_05748822.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-binding chain C [Corynebacterium
efficiens YS-314]
gi|259166401|gb|EEW50955.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
Length = 927
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/783 (54%), Positives = 578/783 (73%), Gaps = 43/783 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV----------------GESTEAVGAGV---------GGGSSGNKMPTLEEYGTNLTK 189
+++ G+ +AVGAG G G N + L+++G NLT+
Sbjct: 140 QLLSGYEGGQGGSPDSPQGGQGGDAVGAGSAPGGRATGSGAGERSNSL-VLDQFGRNLTQ 198
Query: 190 LAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPD 249
A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+
Sbjct: 199 AAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPE 258
Query: 250 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 309
T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEG
Sbjct: 259 TLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEG 318
Query: 310 AIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 369
AIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ +I+ILK
Sbjct: 319 AIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELSIEILK 378
Query: 370 GLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 429
GLR+RYE HH++ TD ALV+AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE
Sbjct: 379 GLRDRYEAHHRVSITDGALVAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPES 438
Query: 430 ARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--A 487
RE+++ + + +EK A+ QDFEKA LRD+E L G+E ++ E + +
Sbjct: 439 LREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEERAEKEKQWRS 488
Query: 488 GDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISR 545
GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+IGQDEAVKA+SR
Sbjct: 489 GDLEEIAEVGEEQIAEVLATWTGIPVFKLTEAESSRLLNMEEELHKRIIGQDEAVKAVSR 548
Query: 546 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 605
AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF +R T
Sbjct: 549 AIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQIDMGEFHDRFT 608
Query: 606 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 665
S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD
Sbjct: 609 ASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDG 668
Query: 666 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFR 724
+GR VDFKNT+LI TSN+G+ I K +GF + + D+ Y+R+K+ V +ELK++FR
Sbjct: 669 QGRIVDFKNTVLIFTSNLGTQDISK-AVGLGFSGSNETDSDAQYDRMKNKVHDELKKHFR 727
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNR+DE++VF QLT+ ++ ++ ++++ V L KD+ +++T++ + + G++P
Sbjct: 728 PEFLNRIDEIVVFHQLTREQIIQMVELLIGRVSRALADKDMGIELTDKAKALLASRGFDP 787
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLAD 843
GARPLRR I R +ED+M+EK+L EI G+ V VDVD DG +G++
Sbjct: 788 VLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVDGWDGESKNTDGATFTFTPRPK 847
Query: 844 PLP 846
PLP
Sbjct: 848 PLP 850
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G ++
Sbjct: 61 QEVEEIIGHGSK 72
>gi|319948880|ref|ZP_08022993.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
gi|319437482|gb|EFV92489.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
Length = 883
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/737 (57%), Positives = 570/737 (77%), Gaps = 16/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVI 139
Query: 155 RMV----GESTEAVG--AGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+++ G+ EA G AG GG SG + L+++G NLT+ A EGKLDPVVGR ++
Sbjct: 140 QLLSGYQGKEAEASGTPAGTGGRESGTPSSSTVLDQFGRNLTQAAMEGKLDPVVGRAKEV 199
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I + +VP+T++ K++ +LD+G LVA
Sbjct: 200 ERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNNEVPETLKDKQLYSLDLGSLVA 259
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGEL
Sbjct: 260 GSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGEL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTL+EYRKHIEKD ALERRFQPV+VPEP V+ +I+ILKGLR+RYE HH++ TD
Sbjct: 320 QTIGATTLEEYRKHIEKDAALERRFQPVQVPEPGVELSIEILKGLRDRYEAHHRVTITDA 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
AL +AAQL+ +YI+DRFLPDKAIDLIDEAG+R+R++ P + RE ++++ + +EK
Sbjct: 380 ALAAAAQLADRYINDRFLPDKAIDLIDEAGARMRIKRMTAPPDLREFDEKIAETRREKES 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A+ QDFEKA LRD E L I+ ++ K+ + DV VV E I ++ W
Sbjct: 440 AIDAQDFEKAAGLRDTEKKL---IAERAEREKQWRAGDM---DVAAVVDEEQIAEVLGNW 493
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+ME+ LHKR+IGQ++A+KA+SRAIRR R GLK+P RP SFIF
Sbjct: 494 TGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAIKAVSRAIRRTRAGLKDPKRPSGSFIF 553
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLT
Sbjct: 554 AGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLT 613
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+
Sbjct: 614 EKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNLGTK 673
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +GF D + +Y R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++
Sbjct: 674 DISK-AVGMGFQ-SSDNTEDAYERMKQKVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIV 731
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+M+ V D LK KD++++V++R + + + G++P GARPLRR I R +ED+++EK
Sbjct: 732 QMVDLMIGRVRDALKAKDMDIEVSDRAKSLLAKRGFDPVLGARPLRRTIQREIEDTLSEK 791
Query: 807 MLAREIKEGDSVIVDVD 823
+L E+ G+ V VDV+
Sbjct: 792 ILFGEVAAGELVKVDVE 808
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|295395582|ref|ZP_06805776.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971601|gb|EFG47482.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
Length = 870
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/742 (56%), Positives = 566/742 (76%), Gaps = 14/742 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD +R +VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHTYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQEVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ + GA G SG+ + L+++G NLT A EGKLDPV+GR+ Q+ERV+
Sbjct: 140 KLISGYQGKEPASTGAREEGTPSGSLV--LDQFGRNLTAAAREGKLDPVIGREEQMERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGDVPETLKDKQLYTLDLGSLVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQP++VPEP++D +QIL+GLR++YE HHK+ TD AL +
Sbjct: 318 ATTLDEYRKNIEKDAALERRFQPIQVPEPTLDIAVQILRGLRDQYENHHKVTITDGALEA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A LS +YI+DR+LPDKAIDLIDEAG+++R+ P+E ++L +++ + K K A+
Sbjct: 378 AVNLSDRYINDRYLPDKAIDLIDEAGAKLRITRMSEPQEIKDLNEKIAEARKRKEVAIDK 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q+FE A + R+ EM+L + DK ++ ++ + G G +V E + +++ TGIP
Sbjct: 438 QNFELAADERNTEMELTKE----RDKAEKAWRSGAKGG--GAIVDEELVAEVLAKATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ +ES RLL+ME+ LHKR+IGQ++A+K++SRAIRR R GLK+P RP SFIF+GPT
Sbjct: 492 VFKLTEEESSRLLRMEDELHKRIIGQNDAIKSVSRAIRRTRAGLKDPKRPSGSFIFAGPT 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELAKALA + FG E A+I LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE VR
Sbjct: 552 GVGKTELAKALAEFLFGDESALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
RRP+++VLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I +
Sbjct: 612 RRPFSIVLFDEVEKAHADIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNLGTRDINR 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G +GF D D +SY+R+K V EELKQ+FRPEFLNR+D+ IVF QL K E+ EI D
Sbjct: 672 -GTPMGFQADND-TSTSYDRMKQKVNEELKQHFRPEFLNRVDDTIVFPQLQKAEIVEIVD 729
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+ L + RL + + ++V++ + + + G++P GARPLRR I + +ED ++EK+L
Sbjct: 730 LFLTRLDTRLADQGMSIEVSDDAKNALADRGFDPVLGARPLRRTIQQDIEDPLSEKILFN 789
Query: 811 EIKEGDSVIVDVDSDGNVTVLN 832
E+ G + VDV+ +G +
Sbjct: 790 ELHSGQRIYVDVEGEGPLATFT 811
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEA+ L HNYIG+EH+LLGL+ EGEG+AA+ LE + +R
Sbjct: 1 MFERFTDRARRVIVLAQEEAKLLKHNYIGTEHILLGLIHEGEGIAAKALEGMDISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV+ ++GE +A
Sbjct: 61 EQVVDIIGEGQQA 73
>gi|183985068|ref|YP_001853359.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
gi|183178394|gb|ACC43504.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
Length = 848
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 565/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFSQTGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V ++LK+KD+ L++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMIGRVANQLKSKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|254823225|ref|ZP_05228226.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 567/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDPAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDLD-VVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M++ V ++LK+KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMIQRVGNQLKSKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|226363749|ref|YP_002781531.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
opacus B4]
gi|226242238|dbj|BAH52586.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
opacus B4]
Length = 845
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/738 (57%), Positives = 565/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E +G G +G +L +++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAESGGTRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + +GD+ V+ EVD I ++ WT
Sbjct: 440 QDFEKAANLRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPSGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+ELAK+LA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELAKSLANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 670
Query: 688 IEKGGRRIGFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +G + D S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT ++
Sbjct: 671 ISKA---VGLGFTSGKGDESNYERMKLKVHDELKKHFRPEFLNRIDDIVVFHQLTTEQIV 727
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+M+ V LK KD+ ++V+E+ + + + G++P GARPLRR I R +ED ++EK
Sbjct: 728 QMVDLMVARVEVALKNKDMTMEVSEKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEK 787
Query: 807 MLAREIKEGDSVIVDVDS 824
+L E+ G V VDVD+
Sbjct: 788 ILFGEVGPGQIVYVDVDN 805
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|379752482|ref|YP_005341154.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|379759922|ref|YP_005346319.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|387873864|ref|YP_006304168.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|443308784|ref|ZP_21038570.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
gi|378802698|gb|AFC46833.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|378807864|gb|AFC51998.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|386787322|gb|AFJ33441.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|442763900|gb|ELR81899.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
Length = 847
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 567/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDPAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M++ V ++LK+KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMIQRVGNQLKSKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|111021395|ref|YP_704367.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
gi|384107232|ref|ZP_10008133.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
gi|419966758|ref|ZP_14482676.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
gi|424854680|ref|ZP_18279038.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|110820925|gb|ABG96209.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
gi|356664727|gb|EHI44820.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|383832621|gb|EID72092.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
gi|414567867|gb|EKT78642.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
Length = 845
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/738 (57%), Positives = 565/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E AG G +G +L +++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGGTRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 320 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVA 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 380 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + +GD+ V+ EVD I ++ WT
Sbjct: 440 QDFEKAANLRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPSGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+ELAK+LA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELAKSLANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 670
Query: 688 IEKGGRRIGFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +G + D S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT ++
Sbjct: 671 ISKA---VGLGFTSGKGDESNYERMKLKVHDELKKHFRPEFLNRIDDIVVFHQLTTEQIV 727
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+M+ V LK KD+ ++VT++ + + + G++P GARPLRR I R +ED ++EK
Sbjct: 728 QMVDLMVARVEVALKNKDMTMEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEK 787
Query: 807 MLAREIKEGDSVIVDVDS 824
+L E+ G V VDV++
Sbjct: 788 ILFGEVGPGQIVYVDVEN 805
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|378824547|ref|YP_005089717.1| clpC gene product (chloroplast) [Synedra acus]
gi|371572746|gb|AEX37842.1| Clp protease ATP binding subunit (chloroplast) [Synedra acus]
Length = 1107
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/775 (54%), Positives = 564/775 (72%), Gaps = 43/775 (5%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT +A +V+ +A E + LG N++G+EH+LL LL E +GVA R L+
Sbjct: 68 GRGTGFVASEI--PFTPRAKRVLEMAVNEGKDLGQNFVGTEHILLALLGETDGVAMRTLD 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS--------GNKMPTLEEYGTNLTKLAE 192
LG D +R + + E+ E + + G++ PTL+E+ N+TK A
Sbjct: 126 KLGVDTKKLRDIIFSYIEETQEEILRPLTQAEKFLLERERKGSQTPTLDEFSENITKEAV 185
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GKLDPV+GR+ +I ++ +L RRTKNNP LIGEPGVGKTA+AEGLAQ I + +VPD ++
Sbjct: 186 DGKLDPVIGREKEINDLIAVLARRTKNNPVLIGEPGVGKTAVAEGLAQLILNENVPDFLD 245
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
G ++ LD+G ++AGTKYRGEFEERLK+++EE++ +I+ IDE+HTL+GAGAAEGA+D
Sbjct: 246 GSLIMALDLGSILAGTKYRGEFEERLKRIVEEVQNDSAVIIVIDEIHTLVGAGAAEGAVD 305
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARG+ +CIGATT DEYRK+IE+DPALERRFQPV V EPSV TI+IL+GL+
Sbjct: 306 AANILKPALARGKFRCIGATTKDEYRKYIERDPALERRFQPVLVEEPSVGTTIEILQGLK 365
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
++E HH L Y +A+ AA LS +YI DRFLPDKAID++DE+G+RVRL + +LPE R
Sbjct: 366 PKFEQHHTLTYDRKAIEQAAILSDKYIPDRFLPDKAIDVLDESGARVRLENRRLPEGLRN 425
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI-----SALVDKGKEMSKAETEA 487
L EL+ + KEK +++ +F A DREM+L+ I SAL D+ + ++ E +
Sbjct: 426 LMNELQTVIKEKENSMKTHNFSLAQNQFDREMELRTHIRIMKQSALADEMRGFNRKEIDK 485
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
V E D+ ++VS WTG+PV K++ ES+RLL+ME+ + +R+IGQ +AV ++S AI
Sbjct: 486 ------VLENDVANVVSNWTGVPVNKITGSESERLLQMEQIIRERIIGQQQAVISVSNAI 539
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGL+NPNRPIASFIF+GPTGVGK+EL KA+A Y FG E +MIRLDMSE+ME+HTV+
Sbjct: 540 RRARVGLRNPNRPIASFIFAGPTGVGKTELTKAVAEYMFGDENSMIRLDMSEYMEKHTVA 599
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVGY EGGQLTEAVR +PY+VVL DE+EKAHPDVFN++LQIL+DGRLTDSKG
Sbjct: 600 KLIGSPPGYVGYNEGGQLTEAVRTKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKG 659
Query: 668 RTVDFKNTLLIMTSNVGSSVIEKGG--------RRIGFDL--------DYD-----EKDS 706
R +DF NT+++MT+N+GS +IE+ + G L D++ EKD+
Sbjct: 660 RVIDFTNTMIVMTTNLGSKIIERESGVKSKDDVKASGLKLMINDNPFGDWEPETELEKDA 719
Query: 707 SYNR-IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 765
R + LV EELK +FRPEFLNR+DE+IVF L+K ++ +I+ IM+K++ DRLK K I
Sbjct: 720 EIVRKVNKLVKEELKNFFRPEFLNRIDEIIVFNHLSKHDIWDISAIMIKQLIDRLKDKGI 779
Query: 766 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
L VTE R +VEEG++P YGARPLRR IM LED +AE+ L+ ++K G S+IV
Sbjct: 780 NLVVTEPVRALLVEEGHDPIYGARPLRRVIMSYLEDQLAERCLSEDLKPGTSIIV 834
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE AIKVIML+QEEARR+GHN++G+E LLLG++ + G+ A+ L+ + R
Sbjct: 1 MFERFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGVIGQRHGIGAKALKKMKVSLKKAR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
++ +G T V + +
Sbjct: 61 KEIEMYIGRGTGFVASEI 78
>gi|269218173|ref|ZP_06162027.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212301|gb|EEZ78641.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 861
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/741 (57%), Positives = 565/741 (76%), Gaps = 16/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KVI A E +LGH+YIG+EHLLLGL RE +GVAA+VL LGAD + +R+QV
Sbjct: 80 FTPRAKKVIEYAMREGLQLGHSYIGTEHLLLGLTREPDGVAAQVLTKLGADMTRVRSQVN 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E VG G GG G K + L++YG NLT+ A + KLDPV+GR + ERV+
Sbjct: 140 QLISGFQGKEPVGVG-GGAREGTKAGSTVLDQYGRNLTQSARDHKLDPVIGRHMETERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ IASGDVP+T++ K++ +LDMG LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIASGDVPETLKDKQLYSLDMGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FE+R+KK+++EI +I+LFIDE+H+L+GAGAAEGA+DAA++LKP +ARGELQ IG
Sbjct: 259 RGDFEDRMKKILKEINTRGDIVLFIDEIHSLVGAGAAEGALDAASLLKPMMARGELQVIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP++V +P+V +T++ILKGLR+RYE H++ TD+A+ +
Sbjct: 319 ATTLDEYRKHIEKDAALERRFQPIQVEQPTVAQTVEILKGLRDRYESFHRVTITDDAIDT 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +Y++DRFLPDKAIDLIDEAG+R+ +R P E RE+++ + + +EK A+ G
Sbjct: 379 AASLADRYVNDRFLPDKAIDLIDEAGARLAIRKMTAPPELREIDERIASVRREKEAAIDG 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTGI 509
QDFEKA LRD E L +K E +A + D+ VV E + ++S TGI
Sbjct: 439 QDFEKAASLRDEEQRLG-------EKRAEREQAWKDGDMDIVSVVDEDLVTEVLSMATGI 491
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV K+S ES +LL+MEE LHKRVIGQ+EAV A+S+AIRR R GLK+PNRP SFIF+GP
Sbjct: 492 PVFKLSEAESAKLLRMEEELHKRVIGQNEAVVALSQAIRRTRAGLKDPNRPGGSFIFAGP 551
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELAKALA + FG E A+I LDMSE+ E+H VS+L G+PPGYVGY EGGQLTE V
Sbjct: 552 TGVGKTELAKALAEFLFGDESALITLDMSEYSEKHAVSRLFGAPPGYVGYDEGGQLTEKV 611
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 612 RRKPFSVVLFDEVEKAHPDLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNLGTKDIA 671
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K G GF D D +SY R+KS V E LK++FRPEFLNR+D+MIVF QL + E+ I
Sbjct: 672 K-GVTTGFQFDGDTT-TSYERMKSRVGEALKEHFRPEFLNRVDDMIVFPQLQREEILRIV 729
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+M+ ++ RL +++ L +T+R +E + + GY+P GARPLRRAI R +ED ++EK+L
Sbjct: 730 DLMVGKLDQRLAKQEMHLVLTKRAKELLADRGYDPVLGARPLRRAIQRDIEDVLSEKLLF 789
Query: 810 REIKEGDSVIVDVDSDGNVTV 830
+ +G +++ DVD + N+ V
Sbjct: 790 GDFAKGQTIVADVDEE-NIPV 809
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQ+EAR L HNY+G+EH LLGL+REGEGVAA+ LE L +R
Sbjct: 1 MFERFTDRARRVIVLAQDEARNLKHNYLGTEHFLLGLIREGEGVAAKALEALDITLDEVR 60
Query: 151 TQVIRMVGESTE 162
QVI ++GE E
Sbjct: 61 AQVIDIIGEGQE 72
>gi|443493153|ref|YP_007371300.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
gi|442585650|gb|AGC64793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
Length = 848
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/739 (57%), Positives = 565/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARIRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFSQTGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V ++LK+KD+ L++T++ + + + G++P G+RPLRR I R +ED ++E
Sbjct: 728 IRMVDLMIGRVANQLKSKDMALELTDKAKSLLAKRGFDPVLGSRPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|397734515|ref|ZP_10501221.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
gi|396929638|gb|EJI96841.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
Length = 824
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/738 (57%), Positives = 565/738 (76%), Gaps = 20/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 118
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E AG G +G +L +++G NLT+ A EGKLDPV+GR +IERV+
Sbjct: 119 QLLSGYQGKEPAEAGGTRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRSKEIERVM 178
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 179 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRY 238
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 239 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 298
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 299 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVA 358
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE + ++ +EK A+
Sbjct: 359 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDA 418
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFEKA LRD+E L AQ + + + +GD+ V+ EVD I ++ WT
Sbjct: 419 QDFEKAANLRDKEKTLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWT 469
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+++AIRR R GLK+P RP SFIF+
Sbjct: 470 GIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVAKAIRRTRAGLKDPKRPSGSFIFA 529
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+ELAK+LA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLTE
Sbjct: 530 GPSGVGKTELAKSLANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTE 589
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+S
Sbjct: 590 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSD 649
Query: 688 IEKGGRRIGFDLDYDEKD-SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +G + D S+Y R+K V +ELK++FRPEFLNR+D+++VF QLT ++
Sbjct: 650 ISKA---VGLGFTSGKGDESNYERMKLKVHDELKKHFRPEFLNRIDDIVVFHQLTTEQIV 706
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+M+ V LK KD+ ++VT++ + + + G++P GARPLRR I R +ED ++EK
Sbjct: 707 QMVDLMVARVEVALKNKDMTMEVTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEK 766
Query: 807 MLAREIKEGDSVIVDVDS 824
+L E+ G V VDV++
Sbjct: 767 ILFGEVGPGQIVYVDVEN 784
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|373253679|ref|ZP_09541797.1| ATP-dependent Clp protease ATP-binding subunit [Nesterenkonia sp.
F]
Length = 868
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/744 (57%), Positives = 556/744 (74%), Gaps = 24/744 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL L AD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVELNADLNKVRQQVI 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMP----TLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+++ G + GAGVG S+G P L+++G NLT A E +LDPVVGR +
Sbjct: 140 QLLSGYQGGGGQDKAGAGVGQ-STGEGTPAGSVVLDQFGRNLTAAAREAQLDPVVGRDYE 198
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +GDVP+ + K++ TLD+G LV
Sbjct: 199 RERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGDVPEILRDKQLYTLDLGSLV 258
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAANILKP LARGE
Sbjct: 259 AGSRYRGDFEERLKKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAANILKPMLARGE 318
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT+DEYRKHIEKD ALERRFQP++V EPSV+ T QIL+GLR+RYE HHK+ T+
Sbjct: 319 LQTIGATTMDEYRKHIEKDAALERRFQPIQVEEPSVEITTQILRGLRDRYEAHHKVSITE 378
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EAL +A+ L+ +YI+DRFLPDKAIDLIDEAG+R+R++ P E +E + ++ + +EK
Sbjct: 379 EALEAASSLANRYINDRFLPDKAIDLIDEAGARLRIQRMTAPPELKEYDAQIEDVRREKE 438
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHI 502
A+ QDFE A LRD+E L + ++ K S E + EVD + +
Sbjct: 439 AAIDAQDFEGAASLRDKEQRLVEERERKEEEWKSGSMDE---------IAEVDADLVAEV 489
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
++ TGIPV K++ ESDRL +MEE LHKRVIGQ+EA+K++SRAIRR R GLK+PNRP
Sbjct: 490 LAFSTGIPVFKLTEQESDRLKRMEEELHKRVIGQEEAIKSLSRAIRRTRAGLKDPNRPSG 549
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK LA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EG
Sbjct: 550 SFIFAGPTGVGKTELAKTLAEFLFGDEDALITLDMSEYSEKHTVSRLFGAPPGYVGYEEG 609
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
GQLTE VRRRP++VVLFDE+EKAH D+FN +LQILEDGRL+DS+GR VDFKNT++IMT+N
Sbjct: 610 GQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLSDSQGRQVDFKNTVIIMTTN 669
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K GF D ++Y R+K V++EL+Q+FRPEFLNR+D+ IVF QL +
Sbjct: 670 LGTGEISK-SVMTGFQSSSD-TTTNYERMKGKVSQELRQHFRPEFLNRVDDTIVFPQLEQ 727
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
E+ +I D+ + ++ DRL + + L VT+ R + E GY+PS GARPLRR I L+ED
Sbjct: 728 SEIVKIVDLFVNQLRDRLSEQAMSLDVTQDARTFLAERGYDPSMGARPLRRTIQSLIEDQ 787
Query: 803 MAEKMLAREIKEGDSVIVDVDSDG 826
++E++L EI G ++ + V G
Sbjct: 788 LSERILFGEIPHGAAITIGVTGSG 811
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLDISLGGVR 60
Query: 151 TQVIRMVGESTEA 163
+V +G A
Sbjct: 61 EKVQEKIGPGQNA 73
>gi|289705692|ref|ZP_06502076.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
gi|289557532|gb|EFD50839.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
Length = 851
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/759 (57%), Positives = 565/759 (74%), Gaps = 21/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVQLGADLNRVRQTVI 139
Query: 155 RMVGE-------STEAVGAGVG-GGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQP 204
+++ E GAGVG G SG + L+++G NLT A +GKLDPV+GR
Sbjct: 140 QLLSGYQGGAQGGKETAGAGVGQGAESGQNAGSVVLDQFGRNLTAAAHDGKLDPVIGRAG 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T+ K++ +LD+G L
Sbjct: 200 EMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIDRGDVPETLRDKQLYSLDLGSL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EPSV++ +IL+GLR+RYE HHK+ T
Sbjct: 320 ELQTIGATTLDEYRKHIEKDAALERRFQPIQVAEPSVEDATEILRGLRDRYEAHHKVSIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL +AA L+ +Y+SDR LPDKAIDLIDEAG+R+R+R +P E + E + ++ +K
Sbjct: 380 DGALKAAAGLADRYVSDRHLPDKAIDLIDEAGARLRIRRMTVPPEIKAYESRIAEVRTQK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD-IQHIV 503
A+ GQDFE A LRD+E L+ D+ +E +A D + D I ++
Sbjct: 440 EAAIDGQDFEGAARLRDQEQQLE-------DERREKEQAWRTGADADVATVDEDLIAEVL 492
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
S TGIPV K++ +E+DRL MEE LH+RVIGQDEA+K++SRAIRR R GLK+PNRP S
Sbjct: 493 SKSTGIPVFKLTEEETDRLRNMEEELHRRVIGQDEAIKSLSRAIRRTRAGLKDPNRPSGS 552
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF+GPTGVGK+ELAK+LA + FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY EGG
Sbjct: 553 FIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYEEGG 612
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
QLTE VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+
Sbjct: 613 QLTEKVRRRPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 672
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ I K G GF D + Y R+K V EEL+Q+FRPEFLNR+D++IVF QL K
Sbjct: 673 GTRDISK-GVMTGFQSATDTT-TGYERMKGKVKEELRQHFRPEFLNRVDDVIVFPQLQKH 730
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ EI D+ + + RL +D+ +++T+ +E + + GY+P+ GARPLRR I +++ED +
Sbjct: 731 EIVEIVDLFISRLGKRLAEQDMSIELTQSAKELLADRGYDPAMGARPLRRTIQQMVEDQL 790
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGS-SGAPESL 841
+EK+L EI G + VD +G L + SG E+L
Sbjct: 791 SEKILFGEIPAGSHITVDATGEGEGAELTFTFSGGREAL 829
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L H+YIG+EH+LLGL+ EGEGVAA+ LE++ +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHSYIGTEHILLGLIHEGEGVAAKALESMDISLGAVR 60
Query: 151 TQVIRMVGESTE 162
+V +G+ +
Sbjct: 61 EKVQEDIGQGQQ 72
>gi|269793011|ref|YP_003317915.1| ATPase AAA-2 domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100646|gb|ACZ19633.1| ATPase AAA-2 domain protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 819
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/744 (55%), Positives = 568/744 (76%), Gaps = 19/744 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ +A + + LA EAR + NY+G+EH+LLGLL EGEGVA ++L +G DP +R +V
Sbjct: 81 LSPRAKRALDLAMREARNMAVNYVGTEHILLGLLAEGEGVAFQILIRMGLDPVKVRQEVQ 140
Query: 155 R-MVGESTEAVGAGVGG------GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+ G S++ G G+ +K PTL++ G +L+++A+ G+LDPV+GR +I+
Sbjct: 141 SYLSGTSSDIQDPRRGSDEQDRKGAQASKTPTLDQLGMDLSEMAKSGELDPVIGRAKEIQ 200
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
R+VQ+L RRTKNNP LIG+PGVGKTAI EGLAQRIASGD+P+ ++GK+V+ L++G LVAG
Sbjct: 201 RLVQVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIASGDIPEVLKGKRVVQLNVGNLVAG 260
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
TKYRGEFEER++KL++E+K+S +ILFIDE+HT++GAG AEGA+DAANILKPSLARGE Q
Sbjct: 261 TKYRGEFEERMRKLVKELKESRSVILFIDEIHTIVGAGGAEGAVDAANILKPSLARGEFQ 320
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATT++EYRK+IEKD ALERRFQP++V EPS ++T++IL+GLR+RYE HH+++ +D+A
Sbjct: 321 VIGATTMEEYRKYIEKDAALERRFQPIQVEEPSEEDTVKILEGLRDRYEAHHRVKISDDA 380
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
LV+AA+LS ++I++RFLPDKAIDLIDEAG+R RL+ + PE+ +ELE+ L ++ KEK A
Sbjct: 381 LVAAARLSKRFITERFLPDKAIDLIDEAGARARLKTMEAPEDLKELERRLEEVRKEKESA 440
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
V Q+FEKA LRD E + +I L + E PVVT D+ IVS WT
Sbjct: 441 VMAQEFEKAAALRDEERRMYEEIEQLRRDWQSRRNQEE------PVVTGEDVATIVSEWT 494
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
G+PV +++ +E+ RLL+MEE +H R++GQ+EAV A++RAIRR R GLK+P RP+ SF+F
Sbjct: 495 GVPVVQLTEEEAKRLLRMEEEIHSRLVGQEEAVNAVARAIRRGRSGLKDPRRPVGSFLFL 554
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELA+ LA + FGSE+AMIR DMSEFMERH V+KLIG+PPGYVG+ EGG+LTE
Sbjct: 555 GPTGVGKTELARRLAWFLFGSEDAMIRFDMSEFMERHEVAKLIGAPPGYVGHEEGGKLTE 614
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
AVRRRPY+V+LFDEIEKAHPDVFN++LQ+LEDGRLTD +G V+F+NT++IMTSNVG+S
Sbjct: 615 AVRRRPYSVILFDEIEKAHPDVFNILLQLLEDGRLTDGQGHLVNFRNTVIIMTSNVGAS- 673
Query: 688 IEKGGR-RIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
+G R +GF D D+ + ++R + + + +K+ FRPEFLNR+DEM+VFR L + E+
Sbjct: 674 --EGTRSHLGFSSGDEDQAMAGWDRTRGAIMDAVKRTFRPEFLNRVDEMVVFRPLKREEL 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++IA +ML EV R + I L V + ERV++EG++P +GARPLRR I R+ ED +++
Sbjct: 732 RQIAAMMLDEVVARCGERGISLAVDPQVVERVLDEGFDPKFGARPLRRTIQRMTEDPLSD 791
Query: 806 KMLAREIKEGDSVIVDVDSDGNVT 829
ML ++ +G V V DG V+
Sbjct: 792 MMLEGKVPQGARVEA-VMEDGRVS 814
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 50/68 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M++ FTE+ KVI LA EA RLGH IG+EHLLLGLL EGEGVAA+VL+ G D IR
Sbjct: 1 MWQFFTERGKKVIQLAHREALRLGHEVIGTEHLLLGLLAEGEGVAAQVLKMAGLDLDEIR 60
Query: 151 TQVIRMVG 158
QV R+VG
Sbjct: 61 EQVERVVG 68
>gi|126437706|ref|YP_001073397.1| ATPase [Mycobacterium sp. JLS]
gi|126237506|gb|ABO00907.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS]
Length = 847
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/739 (56%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E+ AG GG + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKESAEAGTGGRGGESGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++L+ KD+ +++T+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IKMVDLMIGRVGNQLRAKDMTMELTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L EI G + VDV++
Sbjct: 788 KILFEEIGPGQLITVDVEN 806
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|425736428|ref|ZP_18854733.1| ATPase [Brevibacterium casei S18]
gi|425478261|gb|EKU45459.1| ATPase [Brevibacterium casei S18]
Length = 845
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/738 (56%), Positives = 567/738 (76%), Gaps = 16/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGH+YIG+EH+LLGL+REGEGVAA+VL LGAD +R +VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQEVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ A G G SG+ + L+++G NLT A EGKLDPV+GR Q++RV+
Sbjct: 140 KLLSGYQGKEPVAAGGREEGTPSGSLV--LDQFGRNLTAAAREGKLDPVIGRHEQMQRVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+ + K++ TLD+G LVAG++Y
Sbjct: 198 QILSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPEILTDKQLYTLDLGSLVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRKHIEKD ALERRFQP++VPEPS+ +I+ILKGLR++YE HHK+ T+ AL +
Sbjct: 318 ATTLDEYRKHIEKDAALERRFQPIQVPEPSLAHSIEILKGLRDKYEAHHKVTITEGALAA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +S +YI+DR+LPDKAIDLIDEAG+++R+ +P+E R+LE+++ + K A+
Sbjct: 378 AVNMSDRYINDRYLPDKAIDLIDEAGAKLRISRLSVPQEIRDLEEKILEARHRKEAAIDA 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD-IQHIVSAWTGI 509
QDFE A RD EM L+ + +E ++A ++G + D I ++++ TGI
Sbjct: 438 QDFELAASERDSEMKLQHE-------KEEQTEAWRKSGKDTSATVDADLIAEVLASATGI 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
P+ K++ +ES RLL+ME+ LHKR+IGQ++AVK+ISRAIRR R GLK+P RP SFIF+GP
Sbjct: 491 PIFKLTEEESSRLLRMEDELHKRIIGQNDAVKSISRAIRRTRAGLKDPKRPSGSFIFAGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELAKALA + FG E+++I LDMSE+ E+HTVS+L GSPPGYVGY EGGQLTE V
Sbjct: 551 TGVGKTELAKALAEFLFGDEDSLISLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ +
Sbjct: 611 RRKPFSVVLFDEVEKAHSDIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNLGTRDV- 669
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
G ++GF ++ D K ++Y+R+K V EELKQ+FRPEFLNR+D+ IVF QL K E+ EI
Sbjct: 670 SSGLQMGFQVEGDTK-TNYDRMKQRVNEELKQHFRPEFLNRVDDTIVFPQLNKEEIIEIV 728
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ L+ + RL + +++++T+ + + + GY+P GARPLRR I +ED ++EK+L
Sbjct: 729 DLFLERLDTRLADQGMKVELTDAAKNLLADRGYDPVLGARPLRRTIQLEIEDQLSEKILF 788
Query: 810 REIKEGDSVIVDVDSDGN 827
+EI G ++ VD++ +G
Sbjct: 789 KEIGRGQTIKVDIEGEGK 806
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEG+AA+ LE + +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKLLKHNYIGTEHILLGLIHEGEGLAAKALEGMDISLEQVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 DQVQEIIGQGQQA 73
>gi|323357510|ref|YP_004223906.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
gi|323273881|dbj|BAJ74026.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
Length = 841
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/739 (57%), Positives = 567/739 (76%), Gaps = 20/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKM---PTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++ G+ V +G G S G L+++G NLT+ A + KLDPV+GR+ +IE
Sbjct: 140 QLLSGYQGKEPAGVASGAGEQSQGAAQGGSAVLDQFGRNLTQAARDNKLDPVIGREKEIE 199
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+QIL RR+KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K+V +LD+G L+AG
Sbjct: 200 RVMQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKGDVPETLKDKQVYSLDLGSLIAG 259
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 SRYRGDFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRKH EKD ALERRFQP++V EPS+ I ILKGLR+RYE HHK++ TD A
Sbjct: 320 TIGATTLDEYRKHFEKDAALERRFQPIQVAEPSLPHAINILKGLRDRYEAHHKVQITDGA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+V+AA L+ +YISDRFLPDKAIDLIDEAG+R+RL P E RE ++++ ++ ++K +A
Sbjct: 380 IVAAANLADRYISDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDEKIAKVREQKEQA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG--PVVTEVDIQHIVSA 505
QDFEKA LRD E L A+ L + + +GDV VV E I +++
Sbjct: 440 SEEQDFEKAASLRDEEKSLLAERLRL--------EKQWRSGDVASHAVVDEGLIAEVLAQ 491
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ +ES RL+ ME+TLH+RVIGQ+EA+ A+SR IRR R GLK+P RP SFI
Sbjct: 492 ATGIPVFKLTEEESSRLMFMEKTLHQRVIGQEEAIAALSRTIRRQRAGLKDPKRPSGSFI 551
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F E A+I LDMSEF E+HTVS+L G+PPG+VG+ EGGQL
Sbjct: 552 FAGPTGVGKTELAKALAEFLFDDEGALISLDMSEFGEKHTVSRLFGAPPGFVGFEEGGQL 611
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR +DFKNT++IMT+N+GS
Sbjct: 612 TEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNLGS 671
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I G +GF ++ + +SY R+K V EELK++F+PEFLNR+D++IVF QL K E+
Sbjct: 672 SAI--AGGPVGFQVEGSAQ-TSYERMKGKVDEELKRHFKPEFLNRVDDVIVFPQLNKDEL 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I + +K + DRL +D+ +++++ +++++E G++P+ GARPLRRA+ R +ED ++E
Sbjct: 729 RQIVGLFVKRLADRLLDRDMTVELSDDAKDKLIEIGFDPTLGARPLRRAMQREVEDRLSE 788
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E++ GD V V V++
Sbjct: 789 KILHGELESGDHVKVGVEN 807
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQV 153
QV
Sbjct: 61 EQV 63
>gi|239916715|ref|YP_002956273.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414827|ref|ZP_06246569.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837922|gb|ACS29719.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 851
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/759 (56%), Positives = 567/759 (74%), Gaps = 21/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQTVI 139
Query: 155 RMVGEST-------EAVGAGVG-GGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQP 204
+++ E GAGVG GG +G + L+++G NLT A +GKLDPV+GR
Sbjct: 140 QLLSGYQGGGQGGKETAGAGVGQGGEAGQNAGSVVLDQFGRNLTAAAHDGKLDPVIGRAG 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LD+G L
Sbjct: 200 EMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIERGDVPETLKDKQLYSLDLGSL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EPSV++ +IL+GLR+RYE HHK+ T
Sbjct: 320 ELQTIGATTLDEYRKHIEKDAALERRFQPIQVAEPSVEDATEILRGLRDRYEAHHKVSIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL +AA L+ +Y+SDR LPDKAIDLIDEAG+R+R+R +P E + E + ++ +K
Sbjct: 380 DGALKAAAGLADRYVSDRHLPDKAIDLIDEAGARLRIRRMTVPPEIKAYESRIAEVRTQK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD-IQHIV 503
A+ GQDFE A LRD+E L+ D+ +E +A D + D I ++
Sbjct: 440 EAAIDGQDFEGAARLRDQEQQLE-------DERREKEQAWRTGADADVATVDEDLIAEVL 492
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
S TGIPV K++ +E+DRL ME+ LH+RVIGQDEA+K++SRAIRR R GLK+PNRP S
Sbjct: 493 SKSTGIPVFKLTAEETDRLRTMEDELHRRVIGQDEAIKSLSRAIRRTRAGLKDPNRPSGS 552
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF+GPTGVGK+ELAK+LA + FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY EGG
Sbjct: 553 FIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYEEGG 612
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
QLTE VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+
Sbjct: 613 QLTEKVRRRPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 672
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ I K G GF D + Y R+K V EEL+Q+FRPEFLNR+D++IVF QL K
Sbjct: 673 GTRDISK-GVMTGFQSATDTT-TGYERMKGKVKEELRQHFRPEFLNRVDDVIVFPQLQKH 730
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ EI D+ + + RL +D+ +++T+ ++ + + GY+P+ GARPLRR I +++ED +
Sbjct: 731 EIVEIVDLFVARLGRRLAEQDLSIELTQSAKDLLADRGYDPAMGARPLRRTIQQMVEDQL 790
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGS-SGAPESL 841
+EK+L EI G + VD +G L + SG E+L
Sbjct: 791 SEKILFGEIPAGSLITVDATGEGEGAELTFTFSGGREAL 829
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 55/72 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L H+YIG+EH+LLGL+ EGEGVAA+ LE++ +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHSYIGTEHILLGLIHEGEGVAAKALESMDISLGAVR 60
Query: 151 TQVIRMVGESTE 162
+V +G+ +
Sbjct: 61 EKVQEDIGQGQQ 72
>gi|410867351|ref|YP_006981962.1| Negative regulator of genetic competence ClpC/MecB
[Propionibacterium acidipropionici ATCC 4875]
gi|410823992|gb|AFV90607.1| Negative regulator of genetic competence ClpC/MecB
[Propionibacterium acidipropionici ATCC 4875]
Length = 841
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/759 (55%), Positives = 572/759 (75%), Gaps = 17/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNTVL 139
Query: 155 RMV----GESTEAVGAGVGG-GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G EA AG G + + L+++G NLT+ A++G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGNDKEAATAGAPDVGPAQSSATVLDQFGRNLTQAAKDGELDPVIGRETEIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ GK++ +LD+G +VAG++
Sbjct: 200 MTVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRGKQIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ +
Sbjct: 260 YRGDFEERMKKVLKEIKTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTV 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKHIEKD ALERRFQP++V EPSV TI+ILKGLR++YE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKHIEKDAALERRFQPIQVAEPSVPLTIEILKGLRDKYEAHHKITITDEAIS 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA LS +Y+ DRFLPDKAIDLIDEAG+R+R+R P + RE++ ++ Q+ +K A+
Sbjct: 380 AAANLSARYVQDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREIDDKIAQVRIDKESAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L ++ +E + +AGD V VV E +I ++S+ T
Sbjct: 440 AQDFERAAGLRDDEKKLISE--------REAKEEAWKAGDSSVPAVVGEEEIAEVLSSST 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES+RLL ME+ + KR +GQ +AVKA+SR+IRR R GLK+P RP+ SFIF+
Sbjct: 492 GIPVFKLTEEESERLLHMEDEIGKRYVGQTDAVKALSRSIRRTRAGLKDPKRPMGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE +SSY R+K+ VTEELK +FRPEFLNRLDE+IVF QL+ +V
Sbjct: 672 ISK-SVNLGFSKAGDE-ESSYERMKAKVTEELKGHFRPEFLNRLDEIIVFHQLSHEDVLR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ E+ RL KD+ ++VT ++ + + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVGELEQRLGDKDMSIEVTPAAKQLLADRGFDPLMGARPLRRTIQRDVEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLP 846
L E+K G V+VDV +G+ + + L D +P
Sbjct: 790 LFGEVKPGQIVLVDVAPEGSEQPFTFTGTSRGELPDEVP 828
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVG 158
QV ++G
Sbjct: 61 AQVEEIIG 68
>gi|404424419|ref|ZP_11006001.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403651405|gb|EJZ06539.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 842
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/765 (56%), Positives = 577/765 (75%), Gaps = 25/765 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + EA AG GG + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ +G+ + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ------RGER--EKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFSQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++L KD+ +++T + + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IQMVDLMIGRVGNQLAGKDMAMELTPKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS-DGNVTVLNGS---SGAPESLADPLP 846
K+L E+ G V VDV+ DG + SGAP++ P
Sbjct: 788 KILFEELGPGQLVTVDVEGWDGEGAGEDAKFTFSGAPKAAGSDGP 832
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|163848025|ref|YP_001636069.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222525912|ref|YP_002570383.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669314|gb|ABY35680.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222449791|gb|ACM54057.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 833
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/739 (57%), Positives = 546/739 (73%), Gaps = 14/739 (1%)
Query: 93 ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 152
+ T +A KVI A EEA RL H+YIG+EHLLLGL+R GEGVA VL+ LG +R Q
Sbjct: 81 QELTARAQKVIKYAIEEANRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRNQ 140
Query: 153 VIRMVGESTEAVGA------GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
V+R++ T A G +K P L+ GT+LT++AE+G+LDP++GRQ +I
Sbjct: 141 VMRVLRHGTAGATAEGRTAPGTTPTQRQSKTPYLDALGTDLTEMAEQGRLDPIIGRQHEI 200
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+QIL RRTKNNP LIGEPGVGKTAI EGLAQRI GDVPD+I+GK+V+TLDMG LVA
Sbjct: 201 ERVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVQGDVPDSIKGKRVVTLDMGALVA 260
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
GTKYRG+FEERLK++++EIK+S ILFIDE HT+IGAG AEG +DAANILKP+L+RGEL
Sbjct: 261 GTKYRGQFEERLKRVIDEIKES-RCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGEL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTLDEYRK+IE+D ALERRFQPV V EPS+++TIQIL+G++ RYE H+L+ +DE
Sbjct: 320 QTIGATTLDEYRKYIERDAALERRFQPVMVDEPSIEDTIQILRGIKSRYEDFHQLQISDE 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
A+ +AA LS +Y+ DR LPDKAIDLIDEA SRVR+ + P R+ + L + KE+
Sbjct: 380 AIRAAAVLSARYVPDRQLPDKAIDLIDEAASRVRMYRSATPPRLRDALRGLEALRKEREA 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A+ Q FE A +LR+RE + ++I + + S E P VTE DI +V W
Sbjct: 440 ALEDQQFELANDLREREERMLSRIQEIEAELGTRSDERYER----PYVTEEDIAEVVGMW 495
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+PV +++ +E+ RL++MEE LH R++GQ EA+ IS+A+RRAR GLK+P RPI SFIF
Sbjct: 496 TGVPVTRLTGNETQRLMQMEEFLHSRIVGQHEAIVTISKAVRRARAGLKDPKRPIGSFIF 555
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTGVGK+ELAKALA + FG+EEA+I++DMSEF ERHT S+L+GSPPGY+GY EGGQLT
Sbjct: 556 LGPTGVGKTELAKALAEFMFGTEEALIKIDMSEFQERHTTSRLVGSPPGYIGYGEGGQLT 615
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
+AVRR+PY+VVLFDEIEKAHPD FN++LQ+LEDG LTD KGR VDF+NT++IMTSNVG+
Sbjct: 616 DAVRRKPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNVGTE 675
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I + RIGF + E D N ++ V E L+ FRPEFLNR+D I+F LT E++
Sbjct: 676 HIRRAS-RIGFGSNAAEIDQ--NDMRRKVDEALRMLFRPEFLNRIDATIIFHPLTTEEIQ 732
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
I +MLK V +L I+L+V E + GY+P++GARPLRR I L+ED +AE
Sbjct: 733 SITRLMLKRVQTQLDEHQIKLEVQPDALEFLARRGYDPAFGARPLRRVITNLIEDPLAEG 792
Query: 807 MLAREIKEGDSVIVDVDSD 825
+L+ + ++GD+VIVD D
Sbjct: 793 LLSGQFRDGDTVIVDTFED 811
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
++ +FT++A +V+ LA EEAR H YIG+EH+LLGL+RE EG+AARVL+ LG R
Sbjct: 4 LYSKFTKRAKQVLQLAAEEARAFNHPYIGTEHILLGLIRESEGIAARVLDELGVKLPQAR 63
Query: 151 TQVIRMV--GEST 161
+ V +V GEST
Sbjct: 64 SAVEFIVGPGEST 76
>gi|435852942|ref|YP_007314261.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
gi|433669353|gb|AGB40168.1| ATPase with chaperone activity, ATP-binding subunit
[Halobacteroides halobius DSM 5150]
Length = 811
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/727 (57%), Positives = 571/727 (78%), Gaps = 8/727 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + KV+ L+ EEARRLGHNY+G+EHLLLGLL+EGEGVAAR+L+ G + I+ QV+
Sbjct: 82 FTPRTKKVLNLSSEEARRLGHNYVGTEHLLLGLLKEGEGVAARILKKEGLEFDKIKKQVV 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
M+G + + G G SG L++Y +LT+LA EGKLDPV+GR +I+RV+QIL
Sbjct: 142 NMLGGAKKK-NNGYGKYKSGRHKGKLDQYSRDLTQLAAEGKLDPVIGRNKEIKRVIQILS 200
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RR KNNP LIGEPGVGKTAIAEGLAQRIA +VP+T+ K+++ LD+ ++AG+KYRGEF
Sbjct: 201 RRRKNNPVLIGEPGVGKTAIAEGLAQRIAEEEVPETLVNKRILALDLSSMLAGSKYRGEF 260
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
E+RLK +M+EI +S ++ILFIDE+H L+GAG AEGAIDAANILKP+LARGELQ IGATTL
Sbjct: 261 EKRLKAIMKEISESGDVILFIDELHNLVGAGGAEGAIDAANILKPALARGELQTIGATTL 320
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKH+E+D ALERRFQ + V EP++++T++ILKGLR+ YE HH+++ TD+A+++AA+L
Sbjct: 321 DEYRKHVEEDAALERRFQSILVEEPTIEDTVKILKGLRDVYEAHHRVKITDDAIMAAAEL 380
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S++YI+DRFLPDKAIDLIDE+GS+ RL+ P E ++L K+L +I +EK A+ Q+FE
Sbjct: 381 SHRYINDRFLPDKAIDLIDESGSQARLQENTAPNELKQLSKKLERIEQEKEAAIEAQEFE 440
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A +LRD+E +K Q+ + + K E G V+T+ +I IVS WTG+PV K+
Sbjct: 441 EAADLRDQEQQIKDQLEEIKTEWK------NEKGMNETVITKENIAEIVSDWTGVPVTKL 494
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ +ES+RLL +E LH+RV+GQDEAV+++++AIRRAR GLK+P RPI SFIF GPTGVGK
Sbjct: 495 AQEESERLLNLEAELHERVVGQDEAVESVAQAIRRARAGLKDPKRPIGSFIFLGPTGVGK 554
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELAK LA F E+AMIR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQLTE VRRRPY
Sbjct: 555 TELAKTLAESMFDDEDAMIRVDMSEYMEKHAVSRLVGAPPGYVGHDEGGQLTEEVRRRPY 614
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQ+LEDG+LTD++GRTVDFKNT++IMTSNVG+ +I+
Sbjct: 615 SVILLDEIEKAHPEVFNVLLQLLEDGQLTDAQGRTVDFKNTVVIMTSNVGADLIQNNTGG 674
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + D+ Y +K V ++K FRPEFLNRLDE+IVF LT+ E+KEI D ML+
Sbjct: 675 LGFK-SPENIDTEYEDMKEKVMGKMKDTFRPEFLNRLDEIIVFHSLTEEEIKEIVDFMLQ 733
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +R+ KD++L VTE +E + E+GY+ +GARPLRR I R++E+ ++E++LA + +E
Sbjct: 734 DLEERIINKDLKLDVTEPAKELLAEKGYDKEFGARPLRRTIRRMIENPLSERLLAGKFEE 793
Query: 815 GDSVIVD 821
GD++ ++
Sbjct: 794 GDTIKIN 800
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 55/70 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F RFTE+A +V+ +Q+EA+ LGHNY+G+EHLLLGLL+EGEG+AA+VL+ ++R
Sbjct: 2 LFGRFTERAKEVMSFSQKEAQNLGHNYVGTEHLLLGLLKEGEGIAAKVLKKNKLQLDDLR 61
Query: 151 TQVIRMVGES 160
++ M+GES
Sbjct: 62 NKIKDMIGES 71
>gi|354558410|ref|ZP_08977665.1| ATPase AAA-2 domain protein [Desulfitobacterium metallireducens DSM
15288]
gi|353546888|gb|EHC16335.1| ATPase AAA-2 domain protein [Desulfitobacterium metallireducens DSM
15288]
Length = 823
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/736 (59%), Positives = 569/736 (77%), Gaps = 16/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ LA EEARR G NYIG+EHLLLGLL EGEGVAARVL N+G P I QVI
Sbjct: 79 FTPRVKRVLELANEEARRQGVNYIGTEHLLLGLLMEGEGVAARVLLNMGVSPEKIWKQVI 138
Query: 155 RMVGESTE--AVGAGVGGGSSGNKM-----PTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
R++G E ++ AG +G + PTL E+G +LT+ A EGKLDPVVGR+ ++E
Sbjct: 139 RLLGGEAEDASMPAGANAAPTGKNVGPGNTPTLNEFGRDLTQSAREGKLDPVVGRESELE 198
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+QIL RRTKNNP LIGEPGVGKTAIAE LAQRI VP+T+ K+V+TLD+ +VAG
Sbjct: 199 RVIQILSRRTKNNPVLIGEPGVGKTAIAESLAQRIVQNKVPETLTNKRVVTLDISSVVAG 258
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
+KYRGEFEERLKK+MEEI+ +I+FIDE+HTLIGAGAAEGAIDAANILKP+LARGELQ
Sbjct: 259 SKYRGEFEERLKKVMEEIRIDGNVIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQ 318
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
CIGATTLDEYRK+IEKD ALERRFQP+ V EP+V++ ++ILKGLR+RYE HH+ + TDEA
Sbjct: 319 CIGATTLDEYRKYIEKDAALERRFQPITVGEPTVEQAVEILKGLRDRYEAHHRTKITDEA 378
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ +A +LS +YISDRFLPDKAIDL+DEA SRVRL P + + LE+++ ++ KEK A
Sbjct: 379 IEAAVRLSDRYISDRFLPDKAIDLMDEAASRVRLDTFNAPPDMKSLEEQVERLKKEKEAA 438
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
V Q+FEKA E+RDRE +L+ D ++ S E++ VTE DI IV++WT
Sbjct: 439 VLAQEFEKAAEIRDREHELRE------DLAQKRSDWESQRDVTKSSVTEDDISQIVASWT 492
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV+K++ +E DRLL +EETLH+RV+GQD+AV A+++A+RRAR GLK+P RPI SFIF
Sbjct: 493 GIPVKKIAQEEGDRLLHLEETLHERVVGQDDAVAAVAKAVRRARAGLKDPKRPIGSFIFL 552
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELA+ LA FG E+AMIR+DMSE+ME+H VS+L+G+PPGY+G+ EGGQLTE
Sbjct: 553 GPTGVGKTELARTLAEALFGEEDAMIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTE 612
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
AVRR+PY+V+L DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDF+N ++IMTSNVG+S
Sbjct: 613 AVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDTKGRTVDFRNAVVIMTSNVGASF 672
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ K +GF DE ++ Y ++ V +ELK+ FRPEFLNR+DE++VF L K + +
Sbjct: 673 LHKEA--MGFAAHRDE-ETEYKNMRRNVMDELKKTFRPEFLNRVDELVVFHSLPKEALVK 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ +I++K+V +K + LQV E + +EG +P+YGARPLRRAI RL+EDS++EK+
Sbjct: 730 VTEILMKQVNKLVKGQGFNLQVEMSALELIAKEGNDPTYGARPLRRAIQRLIEDSLSEKI 789
Query: 808 LAREIKEGDSVIVDVD 823
L E K GD + V+ +
Sbjct: 790 LQGEFKAGDQIRVEAE 805
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 54/68 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M ER+TE+A+KV+ LA+EEA+R+GHN +G+EH+LLGL+ EGEG+AA+ L + +P ++
Sbjct: 1 MPERYTERAVKVLNLAKEEAQRMGHNVVGTEHILLGLVAEGEGIAAKALNGINVEPEKVK 60
Query: 151 TQVIRMVG 158
Q+ +VG
Sbjct: 61 EQIESLVG 68
>gi|15827032|ref|NP_301295.1| ATP-dependent Clp protease [Mycobacterium leprae TN]
gi|221229510|ref|YP_002502926.1| ATP-dependent Clp protease [Mycobacterium leprae Br4923]
gi|13432105|sp|P24428.2|CLPC_MYCLE RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|13092579|emb|CAC29743.1| putative ATP-dependent Clp protease [Mycobacterium leprae]
gi|219932617|emb|CAR70328.1| putative ATP-dependent Clp protease [Mycobacterium leprae Br4923]
Length = 848
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/739 (57%), Positives = 563/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A E KLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMESKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ V+ EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QL++ E+
Sbjct: 671 SDISKP---VGLGFTQGSGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLSRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V ++LK KD+ L++T + + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMISRVANQLKVKDMTLELTNKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ L++LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLDSLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEDIIGQGQQA 73
>gi|406573371|ref|ZP_11049123.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
gi|404557303|gb|EKA62753.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
Length = 839
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/773 (55%), Positives = 574/773 (74%), Gaps = 40/773 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVA +VL LGAD +R VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVATQVLVKLGADLGRVRQTVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMP----------------TLEEYGTNLTKLAEEGKLDP 198
+++ +G GG G L+++G NLT+ A +G+LDP
Sbjct: 140 QLI--------SGYQGGKEGQAAGVGAGAGPAEGQPAGSLVLDQFGRNLTQAARDGQLDP 191
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
V+GR +IERV+Q+L RRTKNNP LIGEPGVGK+A+ EGLAQ I +VP+ ++ K++ T
Sbjct: 192 VIGRGQEIERVMQVLSRRTKNNPVLIGEPGVGKSAVVEGLAQDIVDDNVPEPLKDKQLYT 251
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
LD+G LVAG++YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILK
Sbjct: 252 LDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAASILK 311
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
P LARGELQ IGATTLDEYRKHIEKD ALERRFQP++V EP++ I++LKGLR+RYE H
Sbjct: 312 PMLARGELQTIGATTLDEYRKHIEKDSALERRFQPIQVAEPTLPHAIEMLKGLRDRYEAH 371
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
HK+ TD A+V+A ++ +YI+DRFLPDKAIDLIDEAG+R+R+R P E +E + ++
Sbjct: 372 HKVTITDPAIVAAVTMADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPELKEYDDKIA 431
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD 498
++ EK A+ GQDFEKA LRD E +L A+ K +AE +AGD+ VV EVD
Sbjct: 432 KVRLEKESAIDGQDFEKAAALRDDEKNLLAE--------KAKREAEWKAGDMD-VVAEVD 482
Query: 499 ---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLK 555
I +++A TGIPV K+S +ES RLL ME LHKRV+G D+A+KA+S+AIRR R GLK
Sbjct: 483 EELIAEVLAASTGIPVFKLSEEESTRLLNMEAELHKRVVGNDDAIKALSQAIRRTRAGLK 542
Query: 556 NPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 615
+P RP SFIF+GPTGVGK+ELAKAL+ + FG E+++I LDMSE+ E+HTVS+L GSPPG
Sbjct: 543 DPRRPGGSFIFAGPTGVGKTELAKALSEFLFGDEDSLITLDMSEYSEKHTVSRLFGSPPG 602
Query: 616 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 675
YVGY EGGQLTE VRR+P++VVLFDE+EKAHP++FN +LQ+LEDGRLTDS+GR VDFKNT
Sbjct: 603 YVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPEIFNSLLQVLEDGRLTDSQGRMVDFKNT 662
Query: 676 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMI 735
++IMT+N+G+ I KG +GF D++ + Y R+K+ VT+ELKQ+FRPEFLNR+D+ I
Sbjct: 663 VIIMTTNLGTRDISKGA--MGFTSGTDQR-TDYERMKAKVTDELKQHFRPEFLNRVDDTI 719
Query: 736 VFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAI 795
VF QL++ E+ +I D+ + ++ RLK KD+ +++T +E + + GY+P GARPL+R I
Sbjct: 720 VFPQLSQEEIVQIVDLEVAKLDQRLKDKDMGIELTPAAKELLAKRGYDPVLGARPLKRTI 779
Query: 796 MRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
R +ED ++EK+L E+ G+ V VDV+ +G V GAP+ +P+V
Sbjct: 780 QREIEDVLSEKILFGELTAGEIVAVDVEGEGKAAVFT-FHGAPKVGELDIPLV 831
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVA++ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLIHEGEGVASKALESLGVSLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G +A
Sbjct: 61 EQVQDIIGPGQQA 73
>gi|374992943|ref|YP_004968442.1| chaperone ATPase [Desulfosporosinus orientis DSM 765]
gi|357211309|gb|AET65927.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus orientis DSM 765]
Length = 813
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/740 (57%), Positives = 565/740 (76%), Gaps = 16/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + KV+ LA EEA R NYIG+EHLLLGL+ EGEG+AAR+L NL P + Q++
Sbjct: 79 FTPRVKKVLELANEEAYRQEVNYIGTEHLLLGLIMEGEGIAARILANLNVSPERVWKQIV 138
Query: 155 RMVGESTEAVGAGVGGGSSGNK------MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++G E V + +K P L E+G +LT A EG+LDPV+GR+ +IER
Sbjct: 139 KLLGGELEEAAIPVPNSVTASKNSGSVNTPALNEFGRDLTLQAREGRLDPVIGREKEIER 198
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTAIAEGLAQ I VP+ + K+VITLD+ +VAG+
Sbjct: 199 VIQVLSRRTKNNPALIGEPGVGKTAIAEGLAQGIVGNRVPEILSNKRVITLDLSAMVAGS 258
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERLKK+MEEI+ IILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQC
Sbjct: 259 KYRGEFEERLKKVMEEIRADGNIILFIDELHTLIGAGAAEGAIDAANILKPALARGELQC 318
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK+IEKD ALERRFQP+ V EP+V+E I IL+GLR+RYE HH+++ TDEA+
Sbjct: 319 IGATTLEEYRKYIEKDSALERRFQPISVGEPTVEEAIVILRGLRDRYEAHHRIKITDEAI 378
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA+LS +YISDRFLPDKAIDL+DEA SRVRL P + ++LE+E ++ KEK AV
Sbjct: 379 EAAARLSDRYISDRFLPDKAIDLMDEAASRVRLASFTAPPDLKQLEEEADRLKKEKEAAV 438
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
Q+FEKA E RD+E ++A+++ +G ++ E +VT DI IV++WTG
Sbjct: 439 SSQEFEKAAEFRDKEQKIRAELAE--QRGAWQNQRNKE----NAMVTADDIAQIVASWTG 492
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV+K++ +ES+RLL +E+ LH+R++GQD+AV A++RA+RRAR GLK+P RPI SFIF G
Sbjct: 493 IPVKKLAEEESERLLHLEDLLHQRLVGQDDAVAAVARAVRRARAGLKDPKRPIGSFIFLG 552
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+EL +ALA FG E+A+IR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQLTEA
Sbjct: 553 PTGVGKTELGRALAEGMFGDEKALIRIDMSEYMEKHAVSRLVGAPPGYVGHDEGGQLTEA 612
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+PY+VVL DEIEKAHP+ FN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVGSS +
Sbjct: 613 VRRKPYSVVLLDEIEKAHPEAFNILLQVLEDGRLTDTKGRTVDFRNTVIIMTSNVGSSFL 672
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
+K +GF DEK + Y ++ V EELK+ FRPEFLNR+DE++VF L + + +I
Sbjct: 673 KKEA--MGFAPKKDEK-TDYKNMRGHVMEELKRSFRPEFLNRIDEIVVFHALQEEHLVKI 729
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
A I++ +V RL +EL++ + E + +EG +P +GARPLRRAI RL+ED+++EK+L
Sbjct: 730 AGILVHQVNKRLSENGLELEIEKSAVELIAKEGNDPIFGARPLRRAIQRLIEDALSEKIL 789
Query: 809 AREIKEGDSVIVDVDSDGNV 828
+ K GD + V+ + DG +
Sbjct: 790 EGQFKPGDRIRVEAE-DGTM 808
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 52/65 (80%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
R+TE+A KV+ +AQEEA+R+GH +G+EH+LLGL++EGEG+AA+ L + D + IRTQV
Sbjct: 4 RYTERAEKVLSIAQEEAKRMGHQVVGTEHILLGLIQEGEGIAAQALLGMNVDLAKIRTQV 63
Query: 154 IRMVG 158
++ G
Sbjct: 64 EQLTG 68
>gi|118466434|ref|YP_879836.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
gi|254773513|ref|ZP_05215029.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118167721|gb|ABK68618.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
Length = 822
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/739 (57%), Positives = 565/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 359 VAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 650 SDISKP---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD++L +T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 707 IRMVDLMITRVAGQLKSKDMDLVLTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 766
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 767 KILFEEVGPGQIVTVDVDN 785
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|326328759|ref|ZP_08195095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
gi|325953381|gb|EGD45385.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
Length = 861
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/766 (56%), Positives = 569/766 (74%), Gaps = 24/766 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGH+YIG+EH+LLGL+REGEGVAA+VL+ LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHSYIGTEHILLGLIREGEGVAAQVLQKLGADLNRVRQQVI 139
Query: 155 RMVG----------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+++ S G + + L+++G NLT+ A EGKLDP++GR+
Sbjct: 140 QLLSGFQGKEGQAGTSGATASTGTTSTEAPSSSLVLDQFGRNLTQDAREGKLDPIIGREG 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
QIERV+Q+L RRTKNNP LIGEPGVGKT+I EGLAQ I G+VP+T++ K++ TLD+G L
Sbjct: 200 QIERVMQVLSRRTKNNPVLIGEPGVGKTSIVEGLAQDIVKGNVPETLKDKQIYTLDLGAL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRK++EKD ALERRFQP++VPEP++ I++LKG+R+RYE HH++ T
Sbjct: 320 ELQTIGATTLDEYRKYLEKDAALERRFQPIQVPEPTIAVAIEMLKGIRDRYEAHHRVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEALV+A ++ +YISDRFLPDKAIDLIDEAGSR+R+R P + RE + ++ + + K
Sbjct: 380 DEALVAAVTMADRYISDRFLPDKAIDLIDEAGSRLRIRRMTAPADLREYDDKIADVRQRK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQH 501
A+ GQDFE A LRD E L+ K E KA AGD+ V EVD I
Sbjct: 440 EAAIDGQDFEAAARLRDEE-------KQLIAKKAEREKA-WRAGDMDE-VAEVDEELIAE 490
Query: 502 IVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPI 561
+++ TGIP+ +V+ +ES RLL+ME+ LHKRVIGQDEAVKA+SRAIRR R GLK+P RP
Sbjct: 491 VLAVATGIPIVQVNEEESARLLRMEDELHKRVIGQDEAVKALSRAIRRTRAGLKDPKRPG 550
Query: 562 ASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE 621
SFIF+GP+GVGK+ L+K LA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY E
Sbjct: 551 GSFIFAGPSGVGKTWLSKTLAEFLFGDEDALIQLDMSEFGEKHTVSRLFGSPPGYVGYEE 610
Query: 622 GGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTS 681
GGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+
Sbjct: 611 GGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTT 670
Query: 682 NVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLT 741
N+G+ I K +GF D K SY R+KS V++ELKQ+FRPEFLNR+DE+IVF L+
Sbjct: 671 NLGTRDIAK-SVNLGFSQASD-KAGSYERMKSKVSDELKQHFRPEFLNRVDEVIVFPPLS 728
Query: 742 KLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLED 801
+ ++ + D M+ V RLK +D+ +++T ++ + E G++P GARPLRR + R +ED
Sbjct: 729 QEQIIAMVDNMIGAVEIRLKDRDMGIELTTAAKKLLAERGFDPVLGARPLRRTVQREIED 788
Query: 802 SMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
+AEKML +I G V+VDV+ +G S+ D P+
Sbjct: 789 VLAEKMLYGDIGPGSIVVVDVEGEGPAAKFTFEGQKRSSIPDVPPL 834
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 NQVEEIIGQGQQA 73
>gi|156741993|ref|YP_001432122.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156233321|gb|ABU58104.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 847
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/754 (56%), Positives = 552/754 (73%), Gaps = 39/754 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI A EEA+RL H+YIG+EHLLLGL+R GEGVA VL+ LG +RT V+
Sbjct: 84 LTARAKKVIAYAVEEAKRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRTNVM 143
Query: 155 RMVGESTEAVGAGVGGGSSG-------------NKMPTLEEYGTNLTKLAEEGKLDPVVG 201
R++ + GAG G G +K P L+ GT+LT++AE G+LDPV+G
Sbjct: 144 RVLRQ-----GAGAGVERPGAVSSSSSQSSQRQSKTPYLDALGTDLTEMAEAGRLDPVIG 198
Query: 202 RQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDM 261
RQ +IERV+QIL RRTKNNP LIGEPGVGKTAI EGLAQRI +G+VPD+I+GK+V+TLDM
Sbjct: 199 RQHEIERVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVAGEVPDSIKGKRVVTLDM 258
Query: 262 GLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSL 321
G LVAGTKYRG+FEERLK++++EIK++ ILFIDE HT+IGAG AEG +DAANILKP+L
Sbjct: 259 GALVAGTKYRGQFEERLKRVVDEIKET-RCILFIDEFHTIIGAGGAEGTLDAANILKPAL 317
Query: 322 ARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKL 381
+RGELQ IGATTLDEYRK+IE+D ALERRFQPV V +P+ +ETI+IL+G++ RYE H+L
Sbjct: 318 SRGELQTIGATTLDEYRKYIERDAALERRFQPVMVEQPTEEETIEILRGIKSRYEDFHQL 377
Query: 382 RYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT 441
+ +DEA+ +AA LS +Y+ DRFLPDKAIDLIDEA +RVR+ + P R+ + L I
Sbjct: 378 QISDEAIKAAAHLSARYVPDRFLPDKAIDLIDEAAARVRMTRSATPPSLRDALRGLEAIR 437
Query: 442 KEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG--------PV 493
KE+ A+ + FE A +LR+RE + A+I K E E G +G P
Sbjct: 438 KEREAAIEDEQFELAADLREREERMMARIQ----------KIEAELG-IGSDAHLMERPY 486
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
VTE DI +V WTGIPV+++ DE+ RLL+MEE LH R++GQ EA+ I++A+RRAR G
Sbjct: 487 VTEEDIAEVVGMWTGIPVKRLKGDETTRLLQMEEYLHSRIVGQHEAIVTIAKAVRRARAG 546
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LK+P RPI SFIF GPTGVGK+ELAKALA + FGSEE +I++DMSEF ERHT S+L+GSP
Sbjct: 547 LKDPKRPIGSFIFCGPTGVGKTELAKALAEFMFGSEEHLIKIDMSEFQERHTTSRLVGSP 606
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGY EGGQLT+AVRR+PY+VVLFDEIEKAHPD FN++LQ+LEDG LTD KGR VDF+
Sbjct: 607 PGYVGYGEGGQLTDAVRRKPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFR 666
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 733
NT++IMTSNVG+ I + RIGF + I+ V + LKQ FRPEFLNR+D
Sbjct: 667 NTIIIMTSNVGTEHIRRAS-RIGFSGYSAGSELDNEDIRKKVDDALKQLFRPEFLNRIDA 725
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
I+F LT E+++I +MLK V ++LK ++ L++T+ + + + GY+P+YGARPLRR
Sbjct: 726 TIIFHALTNEEIRQITRLMLKRVQEQLKEHNLTLEITDEACDLLAKRGYDPAYGARPLRR 785
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGN 827
I L+ED ++E +L + GD V+VDV + N
Sbjct: 786 IITNLIEDPLSEGVLEGRFRSGDKVLVDVATLDN 819
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
++++FT++A +V+ +A EEAR H YIG+EH+LLGL+REGEGVAARVL+ LG + R
Sbjct: 5 VYDKFTKRAKQVLQIATEEARAFNHPYIGTEHILLGLIREGEGVAARVLDELGVKLAQAR 64
Query: 151 TQVIRMVG 158
V +VG
Sbjct: 65 HAVEFIVG 72
>gi|297627171|ref|YP_003688934.1| ATP-dependent Clp protease ATP-binding protein [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296922936|emb|CBL57518.1| chaperone clpC (Clp-family ATP-binding protease) (ATP-dependent Clp
protease ATP-binding subunit) [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 858
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/736 (56%), Positives = 560/736 (76%), Gaps = 17/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +RT V+
Sbjct: 80 FTPRAKKVLEYSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIKLGADLNRVRTTVL 139
Query: 155 RMV--------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+++ G+ A +G G+S N L+++G NLT+ A + KLDPV+GRQ ++
Sbjct: 140 QLLSGYQEEGGGQPATAGAPEMGPGTSTNN-GALDQFGRNLTQAARDNKLDPVIGRQKEV 198
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T+ K++ TLD+G LVA
Sbjct: 199 ERVMTVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLRDKQIYTLDLGALVA 258
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G++YRG+FEER KK+++EIK +++LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGEL
Sbjct: 259 GSRYRGDFEERFKKVLKEIKTRGDVMLFIDELHTLVGAGAAEGAIDAASILKPMLARGEL 318
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTLDEYRKHIEKD ALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TDE
Sbjct: 319 QTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSVQLTIEILKGLRDRYEAHHRVTITDE 378
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
AL + A L+ +YI DRFLPDKAIDLIDEAG+R+R+ P + RE + ++ EK
Sbjct: 379 ALSAGANLADRYIQDRFLPDKAIDLIDEAGARMRIARMTAPPDLREFDDKIAATRAEKEA 438
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A+ QDFE A +LRD E L A + KE + E E+ D VV E +I ++S+
Sbjct: 439 AIDHQDFEAAAKLRDDERKLTAARAE-----KETAWREGES-DTPAVVGEEEIAEVLSSS 492
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+PV +++ +ES RLL ME+ +HKR IGQDEAVKAISR+IRR R GLK+PNRP SFIF
Sbjct: 493 TGVPVARLTEEESQRLLNMEDEIHKRYIGQDEAVKAISRSIRRTRAGLKDPNRPSGSFIF 552
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPGYVGY EGGQLT
Sbjct: 553 AGPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGYVGYEEGGQLT 612
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT+++MT+N+GS
Sbjct: 613 EKVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVMTTNLGSR 672
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I + G +GF D ++SY ++KS V+EELKQ+FRPEFLNR+DE++VF QL++ ++
Sbjct: 673 DISR-GVNLGFSKTGD-TENSYEQMKSKVSEELKQHFRPEFLNRVDEVVVFHQLSQDDIL 730
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
I D+M+ ++ +RL +D+ +++T RE V + G++P GARPLRRAI R +ED ++EK
Sbjct: 731 HIVDLMVGQIENRLGDRDMGIELTPAARELVGKRGFDPVLGARPLRRAIQRDIEDPISEK 790
Query: 807 MLAREIKEGDSVIVDV 822
+L ++K G V+VDV
Sbjct: 791 ILYGDLKAGSIVLVDV 806
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 57/71 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQ+EA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE +G +R
Sbjct: 1 MFERFTDRARRVIVLAQDEAKMLNHNYIGTEHILLGLIHEGEGVAAKALEQMGISLEAVR 60
Query: 151 TQVIRMVGEST 161
QVI ++G+ +
Sbjct: 61 EQVIEIIGQGS 71
>gi|348173006|ref|ZP_08879900.1| putative ATP-dependent Clp protease [Saccharopolyspora spinosa NRRL
18395]
Length = 850
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/738 (56%), Positives = 573/738 (77%), Gaps = 24/738 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ E EA G G G SS L+++G NLT+ A EGKLDPV+GR+ +IER+
Sbjct: 140 QLLSGYQGKEPAEAGGRGEGTPSSS---LVLDQFGRNLTQSAREGKLDPVIGREKEIERI 196
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGE GVGKTA+ EGLAQ++ G+VP+T++ K++ TLD+G LVAG++
Sbjct: 197 MQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQKVVKGEVPETLKDKQLYTLDLGSLVAGSR 256
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 257 YRGDFEERLKKVLKEIKTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTI 316
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTL+EYRK++EKDPALERRFQP++V EPS+ T++ILKGLR+RYE HH++ TD ALV
Sbjct: 317 GATTLEEYRKYVEKDPALERRFQPIQVGEPSLQHTVEILKGLRDRYEAHHRVSITDSALV 376
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 377 AAASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRREKESAID 436
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFE+A LRD E L Q KE + + +AGD+ VV EVD I +++ W
Sbjct: 437 AQDFERAARLRDEEKQLLGQ--------KEEREKQWKAGDL-DVVAEVDDEQIAEVLANW 487
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF
Sbjct: 488 TGIPVFKLTEEETTRLLRMEDELHKRIIGQNDAVKAVSQAIRRTRAGLKDPKRPSGSFIF 547
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL+KALA + FG ++A++++DM EF +R+T S+L G+PPGYVGY EGGQLT
Sbjct: 548 AGPSGVGKTELSKALAEFLFGDDDALVQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLT 607
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 608 EKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQ 667
Query: 687 VIEKGGRRIGFDLDYDE-KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K +G + DS+Y R+K+ V EE+K++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 668 DISKA---VGLGFSSGQGADSNYERMKNKVNEEMKKHFRPEFLNRIDDVIVFHQLTEAEI 724
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D++ V LK KD++L++T++ ++ + + G++P GARPLRR I R +ED ++E
Sbjct: 725 IQMVDLLAGRVEKALKAKDMDLELTDKAKKLLAKRGFDPVLGARPLRRTIQREIEDKLSE 784
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L E++ G VIVDV+
Sbjct: 785 KILFGEVQPGQIVIVDVE 802
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|324998065|ref|ZP_08119177.1| putative ATP-dependent Clp protease [Pseudonocardia sp. P1]
Length = 848
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/736 (56%), Positives = 567/736 (77%), Gaps = 18/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ + E +G GG G +L +++G NLT+ A EGKLDPV+GR+ +IER++
Sbjct: 140 QLLSGYQGKEPQESGTGGRGEGTPSSSLVLDQFGRNLTQQAREGKLDPVIGREKEIERIM 199
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGE GVGKTA EGL Q I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 200 QVLSRRTKNNPVLIGEAGVGKTAAVEGLGQAIVKGEVPETLKDKQLYTLDLGSLVAGSRY 259
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 260 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 319
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP++V EPSV TI+ILKGLR+RYE HH++ TD+AL S
Sbjct: 320 ATTLDEYRKYVEKDPALERRFQPIQVSEPSVTHTIEILKGLRDRYEAHHRVTITDDALSS 379
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 380 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIANVRRDKESAIDA 439
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD+E L + K + + ++GD+ VV EVD I ++ WT
Sbjct: 440 QDFERAAHLRDQEKTLLGE--------KAEREKQWKSGDL-DVVAEVDSEQIAEVLGNWT 490
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVK++S+AIRR R GLK+P RP SFIF+
Sbjct: 491 GIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKSVSQAIRRTRAGLKDPKRPSGSFIFA 550
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 551 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 610
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+
Sbjct: 611 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQD 670
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE S+Y R+K+ V +ELK++FRPEFLNR+D++IVF QL + ++ E
Sbjct: 671 ISK-AVGLGFSSGNDEA-SNYERMKTKVNDELKKHFRPEFLNRIDDIIVFHQLNQDQIIE 728
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V +L KD+ +++TER ++ + G++P GARPLRR I R +ED ++EK+
Sbjct: 729 MVDLMIGRVEKQLANKDMAIELTERSKKLLARRGFDPVLGARPLRRTIQREIEDQLSEKI 788
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G V+VDV+
Sbjct: 789 LFGELEGGQIVLVDVE 804
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|390442268|ref|ZP_10230280.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis sp. T1-4]
gi|389834447|emb|CCI34406.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis sp. T1-4]
Length = 795
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/766 (56%), Positives = 552/766 (72%), Gaps = 60/766 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGTGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITTDP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG----NKMP---TLEEYG 184
E +AA++L G D +R +I+ GE V +G S P L +YG
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLIKNAGEK---VASGRFTAKSDYEDQKNAPQGGILAQYG 173
Query: 185 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 244
NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+G PGVGKTAIAEGLAQRI S
Sbjct: 174 RNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGAPGVGKTAIAEGLAQRIHS 233
Query: 245 GDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 304
GD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GA
Sbjct: 234 GDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIHTLVGA 293
Query: 305 GAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 364
G+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++
Sbjct: 294 GSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQA 353
Query: 365 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHA 424
I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 354 IEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYS 413
Query: 425 QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 484
+ E+ +E I E +L+
Sbjct: 414 LQSKSPAEVNEESPLINPE----------------------------SLI---------- 435
Query: 485 TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAIS 544
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+S
Sbjct: 436 -------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEAVNAVS 488
Query: 545 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 604
RAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME H
Sbjct: 489 RAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESH 548
Query: 605 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 664
TVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDG LTD
Sbjct: 549 TVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTD 608
Query: 665 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR 724
S+GR VDFKNTL+IMTSN+GS VIEKGG+ +GF++ D S Y +I + VTEELKQYFR
Sbjct: 609 SQGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEIADDFAQSRYQQISNRVTEELKQYFR 668
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I +QVT F++ V+ EGY+P
Sbjct: 669 PEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDP 728
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
SYGARPLRRA+ R LEDS+A ML+ ++ GD I+DV ++ VTV
Sbjct: 729 SYGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTV 774
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L R
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAASILKDLKVTLHESR 60
Query: 151 TQVIRMVGEST 161
+ M G T
Sbjct: 61 RLIEGMTGRGT 71
>gi|257057497|ref|YP_003135329.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
gi|256587369|gb|ACU98502.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
Length = 851
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/736 (57%), Positives = 571/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GAG G G+ + + L+++G NLT A EGKLDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAAREGKLDPVIGRSKEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPETLKDKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD AL +
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALAA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ ++ +EK A+
Sbjct: 379 AATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEVRREKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q K + + + GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKTLLGQ--------KAEREKQWKDGDLD-VVAEVDDEQIAEVLANWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE D Y ++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ +
Sbjct: 670 ISK-SVSLGFSSSRDETD-RYEKMKQKVHEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIQ 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M+ V ++LK KD+ L++T++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMVSRVEEQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G +IVDV+
Sbjct: 788 LFGEVQPGQIIIVDVE 803
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|425469734|ref|ZP_18848646.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|389880387|emb|CCI38853.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
Length = 795
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/766 (56%), Positives = 553/766 (72%), Gaps = 60/766 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGTGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITSDP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG----NKMP---TLEEYG 184
E +AA++L G D +R +I+ GE V +G S P L +YG
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLIKNAGEK---VASGRFTAKSDYEDQKNAPQGGILAQYG 173
Query: 185 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 244
NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+GEPGVGKTAIAEGLAQRI +
Sbjct: 174 RNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHN 233
Query: 245 GDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 304
GD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GA
Sbjct: 234 GDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIHTLVGA 293
Query: 305 GAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 364
G+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++
Sbjct: 294 GSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQA 353
Query: 365 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHA 424
I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 354 IEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYS 413
Query: 425 QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 484
+ E+ +E I E +L+
Sbjct: 414 LQSKSPAEVSEESPLINPE----------------------------SLI---------- 435
Query: 485 TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAIS 544
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+S
Sbjct: 436 -------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEAVNAVS 488
Query: 545 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 604
RAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME H
Sbjct: 489 RAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESH 548
Query: 605 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 664
TVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDG LTD
Sbjct: 549 TVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTD 608
Query: 665 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR 724
S+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VTEELKQYFR
Sbjct: 609 SQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTEELKQYFR 668
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+ EGY+P
Sbjct: 669 PEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDP 728
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
SYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 729 SYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L R
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESR 60
Query: 151 TQVIRMVGEST 161
+ M G T
Sbjct: 61 RLIEGMTGRGT 71
>gi|403388307|ref|ZP_10930364.1| negative regulator of genetic competence mecB/clpC [Clostridium sp.
JC122]
Length = 809
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/718 (56%), Positives = 552/718 (76%), Gaps = 9/718 (1%)
Query: 109 EARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGV 168
EAR L NYI EH+ L L+REGEGVA ++ NLGADP + + + + + +
Sbjct: 95 EARSLNQNYISPEHMTLALIREGEGVAYTIIVNLGADPLKLYKDIQKAIKGEESNIKSHS 154
Query: 169 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 228
K TL++YG ++T LA EGKLDP++GR + ERV++IL RR KNNPCLIG+PG
Sbjct: 155 KKSKKDTK--TLDKYGKDITDLAYEGKLDPIIGRDKETERVLEILCRRMKNNPCLIGDPG 212
Query: 229 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 288
VGKTAIAEGLAQ+IASG++P+ ++ K+V++LDM ++AG+KYRGEFEERL ++EE+ ++
Sbjct: 213 VGKTAIAEGLAQKIASGNIPEILKEKRVVSLDMSSVLAGSKYRGEFEERLNNIIEEVAKA 272
Query: 289 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 348
+ILFIDE+HT++GAG AEGAIDA+NILKP+LARGE+QCIGATTLDEYRK+IEKD ALE
Sbjct: 273 GNVILFIDEIHTIVGAGGAEGAIDASNILKPALARGEIQCIGATTLDEYRKYIEKDAALE 332
Query: 349 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 408
RRFQ V V EP+ +E I+ILKGLR++YE HH+++ TDEA+ +A +LS +YI+DRFLPDKA
Sbjct: 333 RRFQSVLVDEPTKEEAIEILKGLRDKYEAHHRVQITDEAIEAAVKLSDRYITDRFLPDKA 392
Query: 409 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 468
IDLIDEAG+++R+ + P+ ++L+++L Q TKEK++A+ QDFEKA LRD+E +K
Sbjct: 393 IDLIDEAGAKMRIENLTTPKCLKDLQEKLEQATKEKSDAITMQDFEKAASLRDKEKSIKE 452
Query: 469 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 528
+I E + ++ D +V + +I+S WT IP+EK++ E+ RLLK+EE
Sbjct: 453 EIEK------EEKQWSSKKNDANSIVDASHVANIISRWTNIPIEKLTETEATRLLKLEEI 506
Query: 529 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 588
LH RVIGQDEAV++IS+A+RRARVGLK+P RPI SFIF GPTGVGK+EL KALA FG
Sbjct: 507 LHGRVIGQDEAVESISKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAQAMFGD 566
Query: 589 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 648
E +IR+DMSE+ME+H+VSKLIG+PPGYVG+ EGGQLTE VRR PY+V+LFDEIEKAHPD
Sbjct: 567 ENNLIRIDMSEYMEKHSVSKLIGAPPGYVGFDEGGQLTEKVRRNPYSVILFDEIEKAHPD 626
Query: 649 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 708
VFN +LQILEDGRLTD KG+TV+FKNT++IMTSNVG+S I+K IGF + E + +
Sbjct: 627 VFNALLQILEDGRLTDGKGKTVNFKNTIIIMTSNVGASDIKKQN-TIGFAKNSLEASTGH 685
Query: 709 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 768
++K + E+LK FRPEFLNR+D++IVF +L + ++ +I ++ML + DRL+ ++I ++
Sbjct: 686 EKMKENIMEKLKLTFRPEFLNRIDDIIVFHKLNESDLLKIVELMLNVLSDRLQQQNINIK 745
Query: 769 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 826
+ +E + +EG++P+YGARPLRRAI +++ED +AE++L + GDSVIV VD+D
Sbjct: 746 FSNEAKEFLAKEGFDPTYGARPLRRAITKIIEDKLAEEILKGNVNTGDSVIVTVDNDN 803
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A V+M A +E+R H Y+G+EH+LL +L+E +G++ +L + + N++
Sbjct: 1 MFNRFTERARNVLMYANDESREFKHGYVGTEHILLAVLKEDDGISKNILNDFNINYDNVK 60
Query: 151 TQVIRMVG 158
+ VG
Sbjct: 61 NLIEAYVG 68
>gi|374610138|ref|ZP_09682931.1| ATPase AAA-2 domain protein [Mycobacterium tusciae JS617]
gi|373551169|gb|EHP77798.1| ATPase AAA-2 domain protein [Mycobacterium tusciae JS617]
Length = 851
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/739 (56%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDPAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ +HKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDEIHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ ++M+ V +LK KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 VQMVELMIGRVEKQLKAKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQLVKVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|405979476|ref|ZP_11037819.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391892|gb|EJZ86953.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 822
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/745 (58%), Positives = 581/745 (77%), Gaps = 23/745 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD S +R VI
Sbjct: 80 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKRGADLSQVRQNVI 139
Query: 155 RMV-------GESTEAVGAGVGGGSSGNKMPT--LEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+++ GE E+VGAGVGG S+ + + LE++G NLT+ A + KLDPV+GR+ +
Sbjct: 140 QLLSGYQRGEGEGRESVGAGVGGSSTHERQNSAVLEQFGRNLTQAARDNKLDPVIGRRVE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ +++ +LDMG LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDRQIYSLDMGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSV++TI+ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTNDEYRKYIEKDAALERRFQPVKVDEPSVEDTIEILKGLRDRYEAHHRVIITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+R+R P E REL++++ ++ + K
Sbjct: 380 EAIKAAAELADRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEKIAEVRRNKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD E +L AQ + KE S E+ + VTE +I +++
Sbjct: 440 SAIDDQDFEKAAGLRDEESNLVAQ-----REEKETSWKGGESDSIAE-VTEEEIAEVLAM 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ E+ +LLKME+ LHKRVIGQ+EAV+A+S++IRR R GLK+PNRP SFI
Sbjct: 494 STGIPVFKLTQTETTKLLKMEDELHKRVIGQEEAVRALSQSIRRTRSGLKDPNRPGGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 554 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 673
Query: 686 SVIEKG---GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
I KG G + +L +D Y+R+K+ V EELKQ+FRPEFLNR+D+ IVF L K
Sbjct: 674 RDINKGVLTGFQSADNLTHD-----YSRMKAKVDEELKQHFRPEFLNRVDDTIVFPPLNK 728
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
++K+I D+M+ ++ R++ +D+ LQ+T+ R+ + + G++P GARPLRRAI R +ED+
Sbjct: 729 DQIKQIVDLMIAKLAKRMEAQDMHLQLTDEARDLLADLGFDPVLGARPLRRAIQREIEDA 788
Query: 803 MAEKMLAREIKEGDSVIVDVDSDGN 827
++E++L EI G V V V+ +G+
Sbjct: 789 LSERILFGEIVAGQVVTVGVEGEGS 813
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ L + + ++R
Sbjct: 1 MFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLISEGEGVAAKALAMMDINDDDVR 60
Query: 151 TQVIRMVGESTEAV 164
VI ++GE + V
Sbjct: 61 ASVIEIIGEGEKTV 74
>gi|120406306|ref|YP_956135.1| ATPase [Mycobacterium vanbaalenii PYR-1]
gi|119959124|gb|ABM16129.1| ATPase AAA-2 domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 847
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/738 (57%), Positives = 567/738 (76%), Gaps = 21/738 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +L KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IKMVDLMIGRVSKQLAAKDMTMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVD 823
K+L E+ G V VDV+
Sbjct: 788 KILFEEVGPGQLVTVDVE 805
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|433650481|ref|YP_007295483.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
gi|433300258|gb|AGB26078.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
Length = 849
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/739 (57%), Positives = 568/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + R+ ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRDFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK KD+ + +T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 728 ITMVDLMIGRVSKQLKGKDMAMVLTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQLVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|333992525|ref|YP_004525139.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
gi|333488493|gb|AEF37885.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
Length = 821
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/739 (56%), Positives = 563/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVI 118
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKETAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +G+VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGEVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ +D A+
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSISDSAI 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + AGD+ VV EVD I ++
Sbjct: 419 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRAGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ +AV A+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQKDAVNAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKN +LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNCVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QL+K E+
Sbjct: 650 SDISKA---VGLGFTQGGGENNYERMKLKVNDELKKHFRPEFLNRIDDIIVFHQLSKEEI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LK KD+++ ++++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 707 IQMVDLMIGRVAKQLKAKDMDIALSDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 766
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 767 KILFEELGPGQLVTVDVDN 785
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|41406559|ref|NP_959395.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394908|gb|AAS02778.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 843
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/739 (57%), Positives = 564/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +G TVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGCTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD++L +T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMITRVAGQLKSKDMDLVLTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQIVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|284043144|ref|YP_003393484.1| ATPase AAA [Conexibacter woesei DSM 14684]
gi|283947365|gb|ADB50109.1| ATPase AAA-2 domain protein [Conexibacter woesei DSM 14684]
Length = 868
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/776 (55%), Positives = 575/776 (74%), Gaps = 42/776 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA LGHNYIG+EH+LLGL+RE EGVAAR+L + AD IR +VI
Sbjct: 80 FTPRAKKVLELALREALSLGHNYIGTEHILLGLVRENEGVAARILLDFDADSEKIRNEVI 139
Query: 155 RMVGESTEAVGAGVGG---------------------GSSGNKMPTLEEYGTNLTKLAEE 193
RM+ +G GG G +K+ L+++G NLTKLA +
Sbjct: 140 RML--------SGPGGRRQGASSGSGAGAGAAGQQGEGKKSSKL--LDQFGRNLTKLASD 189
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ ++ER++QIL RR KNNP LIGEPGVGKTA+ EGLAQRI + DVP+ ++G
Sbjct: 190 GKLDPVVGRETEVERIMQILSRRQKNNPVLIGEPGVGKTAVVEGLAQRITNADVPELLKG 249
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ TLD+ LVAG+KYRGEFEERLKK+M+EI Q +IILFIDE+H L+GAGAAEGAIDA
Sbjct: 250 KQIYTLDLAALVAGSKYRGEFEERLKKVMKEITQRGDIILFIDELHNLVGAGAAEGAIDA 309
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A+ILKP+LARGELQ IGATTLDEYRK++E+D ALERRFQ ++V PS DET QIL+GLR+
Sbjct: 310 ASILKPALARGELQTIGATTLDEYRKYLERDAALERRFQQIRVDPPSTDETFQILQGLRD 369
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HHK+ TDEAL +AA L+ +YISDRFLPDKAIDLIDEA +R+R++ P R+L
Sbjct: 370 RYEQHHKVNITDEALTAAADLADRYISDRFLPDKAIDLIDEAAARMRIKSMTSPPVYRDL 429
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-- 491
E+E+ + K A+ Q+FEKA LRD E L K +E+ + + E+G+ G
Sbjct: 430 EEEIETTRRNKEAAIEAQEFEKAANLRDAE-------RRLTQKKRELEE-QWESGESGER 481
Query: 492 PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
P + E +I IVS WTGIPV K++ E+ +L++ME+ LHKRVIGQ AV IS+AIRR+R
Sbjct: 482 PSIGEEEIADIVSMWTGIPVFKLTEAETAKLMRMEDELHKRVIGQQAAVDVISKAIRRSR 541
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SF+F GP+GVGK+ELA+ LA + FG E+AM+R+DMSE+ME+H VS+L+G
Sbjct: 542 AGLKDPKRPTGSFVFLGPSGVGKTELARTLAEFLFGDEDAMVRIDMSEYMEKHAVSRLVG 601
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
SPPGY+GY EGGQLTEAVRR+PY+V+L DEIEKAHPDVFN++LQILEDGRLTD++GRTVD
Sbjct: 602 SPPGYIGYDEGGQLTEAVRRKPYSVLLLDEIEKAHPDVFNILLQILEDGRLTDAQGRTVD 661
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 731
F++ ++IMTSN+G+S I + +GF + DE +Y+ +K+ + ELK+ FRPEFLNR+
Sbjct: 662 FRHAIVIMTSNIGASEIAR-NTPLGFAVSDDETGITYDDMKTRIMGELKKVFRPEFLNRI 720
Query: 732 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 791
D++IVF +L K E+KEI +++L+ + + L ++++L++TE ++ +V++G++P+ GARPL
Sbjct: 721 DDVIVFHKLAKDEIKEIVELLLRRIRESLAERELQLELTEEAKDLLVDKGWDPAMGARPL 780
Query: 792 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
RRAI R +ED +A+ +L E+ G +V+VD +G ++ AP+ P+ V
Sbjct: 781 RRAIQRYIEDPLADFVLRSELMAGGTVMVDRAPEGQEPEVSIEIIAPKPAPTPVGV 836
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+A +V++LAQEEAR L HNYIG+EH+LLGLLRE EG+AARVLE+L +R
Sbjct: 1 MFERFTERARQVVVLAQEEARTLKHNYIGTEHILLGLLREEEGLAARVLESLDITVERVR 60
Query: 151 TQVIRMVGESTEAVGAG 167
QV+R+VG S E V +G
Sbjct: 61 AQVVRIVG-SGEEVTSG 76
>gi|417941914|ref|ZP_12585194.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve CECT
7263]
gi|376167760|gb|EHS86584.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve CECT
7263]
Length = 863
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/741 (56%), Positives = 565/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKM-----PTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
M+ G ST+ G G +K L+++G NLT A EGKLDPV+GR +
Sbjct: 140 DMIRGNSGTSTDGKGDLANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +V
Sbjct: 200 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD
Sbjct: 320 LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I+ +K+
Sbjct: 380 GALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDDKIAKISADKD 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
EA++GQDFEKA ELRD + L+A+ K KE S E E+ DV VV E I ++SA
Sbjct: 440 EAIKGQDFEKAAELRDNQEKLEAE-----RKAKEDSWREGES-DVKMVVDEDVIAEVISA 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFI
Sbjct: 494 TTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 554 FAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGEL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V
Sbjct: 674 RDIAKAA-NTGFNLGAN-SESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQV 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++E
Sbjct: 732 RQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISE 791
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L ++++G VIVD + +G
Sbjct: 792 KILMGDLEDGQKVIVDAEGEG 812
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|260906427|ref|ZP_05914749.1| ATPase [Brevibacterium linens BL2]
Length = 850
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/754 (55%), Positives = 562/754 (74%), Gaps = 10/754 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGH+YIG+EH+LLGL+REGEGVAA+VL LGAD +R +VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQEVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + E V AG + + L+++GTNLT A EG LDPV+GR Q++RV+QI
Sbjct: 140 KLLSGYQGKEPVSAGGREEGTPSGSLVLDQFGTNLTAAAREGTLDPVIGRHEQMQRVMQI 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLA I +G+VP+ +E K++ TLD+G LVAG++YRG
Sbjct: 200 LSRRTKNNPVLIGEPGVGKTAVVEGLALAIVNGEVPEILEDKQLYTLDLGSLVAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKHIEKD ALERRFQP++VPEPS+ +I+ILKGLR++YE HHK+ T+ AL +A
Sbjct: 320 TLDEYRKHIEKDAALERRFQPIQVPEPSLAHSIEILKGLRDKYEAHHKVTITEGALSAAV 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+S +Y++DR+LPDKAIDLIDEAG+++R+ +P+E R+LE+++ + K A+ QD
Sbjct: 380 NMSDRYVNDRYLPDKAIDLIDEAGAKLRISRLSVPQEIRDLEEKILEARHRKEAAIDAQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FE A RD EM L+ DK ++ D VV I +++A TGIP+
Sbjct: 440 FELAASERDSEMKLQQ------DKDEQTEAWRKSGKDTSAVVDAELIAEVLAAATGIPIF 493
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K++ +ES RLL+ME+ LHKR+IGQD+AVK+ISRAIRR R GLK+P RP SFIF+GPTGV
Sbjct: 494 KLTEEESSRLLRMEDELHKRIIGQDDAVKSISRAIRRTRAGLKDPKRPSGSFIFAGPTGV 553
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELAKAL+ + FG E+++I LDMSE+ E+HTVS+L GSPPGYVGY EGGQLTE VRR+
Sbjct: 554 GKTELAKALSEFLFGDEDSLISLDMSEYSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRK 613
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+ I G
Sbjct: 614 PFSVVLFDEVEKAHSDIFNSLLQILEDGRLTDSQGREVDFKNTIIIMTTNLGTRDI-SSG 672
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
++GF ++ + +++Y R+K V EELKQ+FRPEFLNR+D+ IVF QL K E+ +I D
Sbjct: 673 LQLGFQVEGN-TNNNYERMKQKVNEELKQHFRPEFLNRVDDTIVFPQLNKEEILQIVDQF 731
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
L + RL + ++++V++ + + + GY+P GARPLRR I +ED ++EK+L +EI
Sbjct: 732 LARLDARLADQGMKVEVSDAAKSLLADRGYDPVLGARPLRRTIQLEIEDHLSEKILFKEI 791
Query: 813 KEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLP 846
G ++ VDV +G ES+A P
Sbjct: 792 GSGQTIKVDVKGEGKEAEFTFEGVETESIAASGP 825
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEG+AA+ LE + +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKLLKHNYIGTEHILLGLIHEGEGLAAKALEGMDISLEQVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 DQVQEIIGQGQQA 73
>gi|297570833|ref|YP_003696607.1| ATPase AAA [Arcanobacterium haemolyticum DSM 20595]
gi|296931180|gb|ADH91988.1| ATPase AAA-2 domain protein [Arcanobacterium haemolyticum DSM
20595]
Length = 873
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/741 (57%), Positives = 558/741 (75%), Gaps = 24/741 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ A E +LGH+YIG+EHLLLGL RE EGVAA+VL L AD +R QV
Sbjct: 80 FTPRAKKVLEYAMREGLQLGHSYIGTEHLLLGLCREQEGVAAQVLVKLDADLPKVRQQVT 139
Query: 155 RMVG--ESTEAVGA-------GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+++ + EAVG GV GS+ L+++G NLT+ A E KLDPV+GR +
Sbjct: 140 QLLSGYQGKEAVGVGGGGPREGVKAGST-----ILDQFGRNLTQSARENKLDPVIGRHME 194
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+RV+Q+L RR KNNP LIGEPGVGKTA+ EGLAQ IA GDVP+T++ K++ +LDMG LV
Sbjct: 195 TQRVMQVLSRRNKNNPVLIGEPGVGKTAVVEGLAQAIAHGDVPETLKDKQLYSLDMGSLV 254
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEER+KK+++EI +I+LFIDE+HTL+GAGAAEGA+DAA++LKP +ARGE
Sbjct: 255 AGSRYRGDFEERMKKILKEINTRGDIVLFIDEIHTLVGAGAAEGALDAASLLKPMMARGE 314
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATTLDEYRKHIEKD ALERRFQP++V +PSV ETI IL+GLR+RYE H++ TD
Sbjct: 315 LQVIGATTLDEYRKHIEKDAALERRFQPIQVEQPSVKETIAILEGLRDRYEAFHRVTITD 374
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EAL +AA ++ +YI+DRFLPDKAIDLIDEAG+R+ +R P E REL++E+ + ++K
Sbjct: 375 EALEAAATMADRYINDRFLPDKAIDLIDEAGARLAIRKMTAPPELRELDEEIADVKRQKE 434
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVS 504
A+ GQDFEKA LRD+E L +K E KA E DV VV E I ++S
Sbjct: 435 AAIDGQDFEKAAALRDQE-------QQLTEKRAERDKAWREGDLDVVAVVDEDLISEVLS 487
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
TGIPV K++ ES +LL+MEE LHKRVIGQ EAV A+S+AIRR R GLK+PNRP SF
Sbjct: 488 MATGIPVFKLTEAESAKLLRMEEELHKRVIGQSEAVTALSQAIRRTRAGLKDPNRPGGSF 547
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + FG E+A+I LDMSEF E+HTVS+L G+PPGYVGY EGGQ
Sbjct: 548 IFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYDEGGQ 607
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDE+EKAH D+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G
Sbjct: 608 LTEKVRRKPFSVVLFDEVEKAHQDLFNSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNLG 667
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K G GF D D+ SSY R+K V +ELK +FRPEFLNR+D++IVF QL K E
Sbjct: 668 TKDIAK-GVATGFQFDGDQT-SSYERMKLRVNDELKNHFRPEFLNRVDDIIVFPQLQKPE 725
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+M+ ++ RL + + + +T++ + + + GY+P GARPLRRAI R +ED ++
Sbjct: 726 ILQIVDLMIAKLGARLADQGMGIVLTDKAKNLLADRGYDPVLGARPLRRAIQRDIEDELS 785
Query: 805 EKMLAREIKEGDSVIVDVDSD 825
EK+L E + G +++VDV+ D
Sbjct: 786 EKLLFGEFRSGQTIVVDVNED 806
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNY+G+EH+LLGL++EGEGVAA+ LE LG +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARNLKHNYLGTEHILLGLIKEGEGVAAKALEALGVSFDAVR 60
Query: 151 TQVIRMVGESTE 162
QV+ ++GE E
Sbjct: 61 DQVVEIIGEGQE 72
>gi|440785432|ref|ZP_20962189.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
gi|440218328|gb|ELP57550.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
Length = 812
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/731 (56%), Positives = 561/731 (76%), Gaps = 7/731 (0%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ ++ EA L HNYI EH+LL L+REGEGVA +L NL AD +R +++
Sbjct: 82 LTPRTKRLLEISALEATNLNHNYISPEHILLALIREGEGVAFTILGNLNADFDRLRKEIL 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+ V S+ N P L ++G +LT +A EGKLDPV+GR + +RV++IL
Sbjct: 142 EKLAAGEGNVSNNKTSNSTNNSTPALNQFGRDLTLMAAEGKLDPVIGRDGETQRVLEILC 201
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNPCLIG+PGVGKTAIAEGLAQRI SG++P+ ++ K+VITLD+ +VAG+KYRGEF
Sbjct: 202 RRTKNNPCLIGDPGVGKTAIAEGLAQRIVSGNIPEILKDKRVITLDISSMVAGSKYRGEF 261
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLK++M EI+ S +ILFIDE+HT+IGAG AEGAIDA+NILKPSLARGE+QCIGATT+
Sbjct: 262 EERLKRVMTEIRNSGNVILFIDEIHTIIGAGGAEGAIDASNILKPSLARGEIQCIGATTI 321
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IEKD ALERRFQPV V EPS +E + ILKGLR++YE HH+++ TD+AL +A L
Sbjct: 322 DEYRKYIEKDSALERRFQPVTVGEPSKEEAVLILKGLRDKYEAHHRVKITDDALEAAVNL 381
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DR+LPDKAIDLIDEAG++VR+ + P + + E+EL + KEK +A+R QDFE
Sbjct: 382 SDRYITDRYLPDKAIDLIDEAGAKVRIENLTAPPDLKNQEEELEKTEKEKADAIRLQDFE 441
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
KA LRD+E +LK +I K + +V E I +V+ W IPVEK+
Sbjct: 442 KAARLRDKEKELKEKIEDFKKNWKNRKDVKNH------IVAEAQIAAVVAKWANIPVEKL 495
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ ES++LLK+EE LHKRVIGQ+EAVK++SRA+RRARVGLK+P RPI SFIF GPTGVGK
Sbjct: 496 TEKESEKLLKLEEILHKRVIGQNEAVKSVSRAVRRARVGLKDPKRPIGSFIFLGPTGVGK 555
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA FG E ++IR+DMSE+ME+HTVS+LIGSPPGYVG+ +GGQLTE VRR+PY
Sbjct: 556 TELSKALAEAMFGDENSIIRIDMSEYMEKHTVSRLIGSPPGYVGFDDGGQLTEKVRRKPY 615
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQILEDGRLTD KG+TV+F+NT++I+TSNVG+S I+K +
Sbjct: 616 SVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGKTVNFRNTIIILTSNVGASTIKK-QKS 674
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF ++ +E + Y ++K V EELK+ FRPEFLNR+D++IVF QL + +++E+ +ML+
Sbjct: 675 LGFAVNNNEVEDEYEKMKENVMEELKRSFRPEFLNRIDDIIVFHQLLEEDLQEVVKLMLQ 734
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
V RL +DI ++ TE + + ++G++P+YGARPLRR I +++ED ++E++L + +
Sbjct: 735 SVSVRLSDQDINIKFTEEAEKLLAKKGFDPTYGARPLRRTITKIVEDKISEEILNGSLSK 794
Query: 815 GDSVIVDVDSD 825
GDSV V V+ +
Sbjct: 795 GDSVSVTVNDN 805
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 91 MF-ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF RF E+ KV+ A+EEA+ H YIG+EH+LLG+L+E G++ ++L NLG +
Sbjct: 1 MFSNRFNERTEKVLFYAKEEAQMFQHGYIGTEHILLGILKEENGISKKILNNLGITIDAV 60
Query: 150 RTQV 153
R +
Sbjct: 61 RNLI 64
>gi|427390984|ref|ZP_18885390.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732322|gb|EKU95132.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 866
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/737 (57%), Positives = 563/737 (76%), Gaps = 17/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KVI A E +LGH+YIG+EHLLLGL RE +GVAA+VL+ LGAD +R QV
Sbjct: 80 FTPRAKKVIEYAMREGLQLGHSYIGTEHLLLGLTREPDGVAAQVLQKLGADMPTVRNQVN 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ E+ G G +G+ + L++YG NLT+ A + KLDPV+GR + ERV
Sbjct: 140 QLISGFQGKEAVGVGGGRREGQKAGSTI--LDQYGRNLTQAARDHKLDPVIGRHTETERV 197
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+Q+L RRTKNNP LIGEPGVGKTA+ EGL+Q IA+ +VP+T++GK++ +LDMG LVAG++
Sbjct: 198 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQMIAADNVPETLKGKQLYSLDMGSLVAGSR 257
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EI +IILFIDE+HTL+GAGAAEGA+DAA++LKP LARGE+Q I
Sbjct: 258 YRGDFEERMKKILKEINTRGDIILFIDEIHTLVGAGAAEGALDAASLLKPMLARGEIQVI 317
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V +P+ ++TI+ILKGLR+RYE +H++ TD+AL
Sbjct: 318 GATTLDEYRKYIEKDAALERRFQPIQVDQPTAEQTIEILKGLRDRYESYHRVTITDDALE 377
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA LS +YI+DRFLPDKAIDLIDEAG+R+ +R P E REL++++ + K A+
Sbjct: 378 AAATLSERYINDRFLPDKAIDLIDEAGARLAIRKMTAPPELRELDEKISSTRRAKEAAID 437
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAWTG 508
GQDFE+A +LRD E L A+ E KA + DV VV E I ++S TG
Sbjct: 438 GQDFERAAKLRDEEQSLNAERD-------EKEKAWKDGDMDVVSVVDEDLITEVLSMSTG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K+S ES++LL+ME+ LHKRVIGQ EAV AIS+AIRR R GLK+PNRP SFIF+G
Sbjct: 491 IPVFKLSEAESEKLLRMEDELHKRVIGQHEAVTAISQAIRRQRAGLKDPNRPGGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELAKALA + FG E A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLTEA
Sbjct: 551 PTGVGKTELAKALAEFLFGDESALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEA 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDEIEKAH D+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEIEKAHADLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNLGTKDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K G + GF D D +SY R+K V+EELK +FRPEFLNR+D++IVF QL + E+ +I
Sbjct: 671 AK-GVQTGFQFDQDTT-TSYERMKMKVSEELKSHFRPEFLNRVDDVIVFPQLGRDEILQI 728
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+M+ ++ RL+ + + + +T+ +E + + GY+P GARPLRRAI R +ED ++EK+L
Sbjct: 729 VDLMIGKLDKRLRGQKLSIALTKDAKELLADRGYDPVLGARPLRRAIQRDIEDVLSEKLL 788
Query: 809 AREIKEGDSVIVDVDSD 825
E ++G ++VDVD +
Sbjct: 789 YGEFEDGQVIVVDVDKN 805
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNY+G+EH+LLGL+REGEGVAA+ LE LG +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARNLKHNYLGTEHVLLGLIREGEGVAAKALEALGITLDEVR 60
Query: 151 TQVIRMVGESTE 162
+VI ++GE E
Sbjct: 61 AEVIEIIGEGQE 72
>gi|408501309|ref|YP_006865228.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
gi|408466133|gb|AFU71662.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
Length = 882
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/743 (55%), Positives = 573/743 (77%), Gaps = 21/743 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL +G D ++RT I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMGVDLGDLRTATI 139
Query: 155 RMVGESTEAVGAGVG-----------GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ 203
M+ S E AG G GG +G+ + L+++G NLT+ A EGKLDPV+GR
Sbjct: 140 DMIRGSHEGGDAGKGDLANAGGVSNKGGQTGSAI--LDQFGRNLTQEAAEGKLDPVIGRA 197
Query: 204 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 263
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G
Sbjct: 198 NEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIHNGDVPETLKGKQVYSLDLGS 257
Query: 264 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 323
+VAG++YRG+FEERLKK+++EIK +IILFIDE+HT++GAG+A+GA+ A+++LKP LAR
Sbjct: 258 MVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDEIHTIVGAGSADGALGASDMLKPLLAR 317
Query: 324 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 383
GELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ +TI+ILKGLR RYE HH +
Sbjct: 318 GELQTIGATTTDEYRKYIEKDAALERRFQPIQVSEPTIAQTIEILKGLRGRYEHHHHVTI 377
Query: 384 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 443
TD+AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I+ +
Sbjct: 378 TDKALQSAAELSARYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDTKVDRISAQ 437
Query: 444 KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIV 503
K++A++ QDFEKA +LRD + L+A+ K KE + E E+ DV VV E I +V
Sbjct: 438 KDQAIKDQDFEKAAQLRDSQEKLEAE-----RKEKEKAWHEGES-DVKMVVDEDVIAEVV 491
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
S+ TGIPV K++ ES +LL ME+ LHKR+IGQDEAV A+SR+IRR RVGLK+P RP S
Sbjct: 492 SSTTGIPVFKLTQAESKKLLGMEKELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGS 551
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG
Sbjct: 552 FIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYSTSRLFGAPPGYVGYEEGG 611
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+
Sbjct: 612 ELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRMVDFKNTIIILTTNL 671
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ I K GF++ + ++SY R+K VT ELKQ FRPEFLNRLD++IVF+QLT+
Sbjct: 672 GTRDIAKAA-NTGFNVSGN-TETSYQRMKDQVTSELKQQFRPEFLNRLDDIIVFQQLTEP 729
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
+V++I D+ + ++ DRL + + L +T++ ++ + E+G++P GARPLRR I R +ED++
Sbjct: 730 QVRQIVDLDIAQLNDRLFERHMSLDLTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAV 789
Query: 804 AEKMLAREIKEGDSVIVDVDSDG 826
+EK+L ++ + +SV VD + +G
Sbjct: 790 SEKILMGDLTDNESVQVDAEGEG 812
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REG+GVAA+ + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKAQASKGVELDATR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|340793465|ref|YP_004758928.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
gi|340533375|gb|AEK35855.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
Length = 874
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/777 (54%), Positives = 573/777 (73%), Gaps = 30/777 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMV-----GE------STEAVGAGVGGGSSGNKMPT-----------LEEYGTNLTKLAE 192
+++ GE S E GAGVG G P+ L+++G NLT+ A+
Sbjct: 140 QLLSGYEGGEPESEQASDEPAGAGVGPGDGAPSAPSGKPGQKSNSLVLDQFGRNLTQAAK 199
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 200 DGKLDPVVGRGKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLK 259
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAID
Sbjct: 260 DKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAID 319
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AA+ILKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ T++ILKGLR
Sbjct: 320 AASILKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVEMTVEILKGLR 379
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HH++ TD AL +AA+LS +YI+DRFLPDKA+DLIDEAG+R+R+R P+ ++
Sbjct: 380 DRYEAHHRVSITDGALAAAARLSDRYINDRFLPDKAVDLIDEAGARMRIRRMTAPKAIQD 439
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
++ ++ ++ + K A+ QDFEKA LRD E L + + KE E DV
Sbjct: 440 VDDKIAEVRRAKEAAIDDQDFEKAASLRDDERQLSEERAE-----KEKQWRAGELDDVAE 494
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
+ E +I ++ AWTGIPV +++ +E+ RLL ME+ LH+R+IGQ++AVKA+SRAIRR R
Sbjct: 495 -IGEQEIAEVLGAWTGIPVVQLTEEETTRLLHMEDELHERIIGQEDAVKAVSRAIRRTRA 553
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG E+++I +DM EF ++ T S+L G+
Sbjct: 554 GLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDEDSLISIDMGEFHDKFTASRLFGA 613
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR VDF
Sbjct: 614 PPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDF 673
Query: 673 KNTLLIMTSNVGSSVIEKG-GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 731
KNT+LI TSN+G+ I K G + DEK Y+R+KS V +ELK++FRPEFLNR+
Sbjct: 674 KNTVLIFTSNLGTRDISKAVGMGFSSTGESDEK-GQYDRMKSKVNDELKKHFRPEFLNRI 732
Query: 732 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 791
D+++VF QLT+ ++ E+ D++L + L KD+ L+V+++ ++ + + G++P GARPL
Sbjct: 733 DDIVVFHQLTQAQIVEMVDLLLGRLRKALSDKDMALEVSDKAKDLLAKRGFDPVLGARPL 792
Query: 792 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
RR I R +ED ++E++L + G+ V VDVD+ G++ S P PVV
Sbjct: 793 RRTIQREIEDHLSEEILFGNVASGEIVTVDVDNWDGGPRTEGATFVFGSRPKPAPVV 849
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 56/68 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 61 TEVEDIIG 68
>gi|260578411|ref|ZP_05846325.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
gi|258603433|gb|EEW16696.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
Length = 885
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/752 (56%), Positives = 572/752 (76%), Gaps = 33/752 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMV----GESTEAVG---AGVGGGSSGNKMPT----------LEEYGTNLTKLAEEGKLD 197
+++ G E+ G A G GSS P+ L+++G NLT+ A++GKLD
Sbjct: 140 QLLSGYEGNEEESAGGEPATAGVGSSPEGAPSRPGQKSNSLVLDQFGRNLTQAAKDGKLD 199
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PVVGR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++
Sbjct: 200 PVVGRENEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQLY 259
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+IL
Sbjct: 260 SLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASIL 319
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ T++ILKGLR+RYE
Sbjct: 320 KPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELTVEILKGLRDRYEA 379
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+R++ P+ ++++ ++
Sbjct: 380 HHRVSITDGALKAAAQLADRYINDRFLPDKAVDLIDEAGARMRIKRMTAPKAIQDIDDKI 439
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE--TEAGDVGPV-- 493
++ ++K A+ QDFEKA LRD E L G+E ++ E AG++ V
Sbjct: 440 AEVRRKKEAAIDEQDFEKAASLRDDERKL----------GEERAEKEKAWRAGELDEVAE 489
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
V E I ++ WTGIPV K++ +ES RLL ME+ LHKR+IGQD+AVKA+SRAIRR R G
Sbjct: 490 VGEEQIAEVMGNWTGIPVFKLTEEESTRLLHMEDELHKRIIGQDDAVKAVSRAIRRTRAG 549
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF ++ T S+L G+P
Sbjct: 550 LKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDKFTASRLFGAP 609
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFK
Sbjct: 610 PGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFK 669
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLD 732
NT+LI TSN+G+ I K +GF + ++++ Y R+K V +ELK++FRPEFLNR+D
Sbjct: 670 NTVLIFTSNLGTRDISK-AVGMGFSSSGEADEETQYERMKQKVDDELKKHFRPEFLNRID 728
Query: 733 EMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLR 792
+++VF QLT+ ++ ++ D++L V L+ KD++L++TE+ + + + G++P GARPLR
Sbjct: 729 DIVVFHQLTREQIVQMVDLLLGRVRTALQAKDMDLELTEQAKSLLAKRGFDPVLGARPLR 788
Query: 793 RAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 824
R I R +ED ++EK+L EI G+ V VDV++
Sbjct: 789 RTIQREIEDQLSEKILFGEIGAGEIVTVDVEN 820
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL++EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 61 TEVKDIIG 68
>gi|291457456|ref|ZP_06596846.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve DSM 20213 = JCM 1192]
gi|57339190|gb|AAW49584.1| ClpC [Bifidobacterium breve UCC2003]
gi|291381291|gb|EFE88809.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve DSM 20213 = JCM 1192]
gi|339479561|gb|ABE96029.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
breve UCC2003]
Length = 869
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/741 (56%), Positives = 564/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKM-----PTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
M+ G ST+ G G +K L+++G NLT A EGKLDPV+GR +
Sbjct: 140 DMIRGNSGTSTDGKGDLANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +V
Sbjct: 200 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD
Sbjct: 320 LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I +K+
Sbjct: 380 GALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDDKIAKIAADKD 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
EA++GQDFEKA ELRD + L+A+ K KE S E E+ DV VV E I ++SA
Sbjct: 440 EAIKGQDFEKAAELRDNQEKLEAE-----RKAKEDSWREGES-DVKMVVDEDVIAEVISA 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFI
Sbjct: 494 TTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 554 FAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGEL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ EV
Sbjct: 674 RDIAKAA-NTGFNLGAN-TESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPEV 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++E
Sbjct: 732 RQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISE 791
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L ++++G VIVD + +G
Sbjct: 792 KILMGDLEDGQRVIVDAEGEG 812
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|402570803|ref|YP_006620146.1| chaperone ATPase [Desulfosporosinus meridiei DSM 13257]
gi|402252000|gb|AFQ42275.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus meridiei DSM 13257]
Length = 813
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/735 (58%), Positives = 559/735 (76%), Gaps = 15/735 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ LA EEA R NYIG+EHLLLGL+ EGEG+AAR+L NL P + QV
Sbjct: 79 FTPRVKRVLELANEEAHRQEVNYIGTEHLLLGLIMEGEGIAARILANLNVSPERVWKQVA 138
Query: 155 RMVGESTEAVGAGVGGGSSGNK------MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++G + V +K P L E+G +LT A EG+LDPV+GR+ +IER
Sbjct: 139 KLLGGEFDEAAIPVSNSVPASKNAGSVTTPALNEFGRDLTLQAREGRLDPVIGREKEIER 198
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTAIAEGLAQ I + VP+ + K+VITLD+ +VAG+
Sbjct: 199 VIQVLSRRTKNNPALIGEPGVGKTAIAEGLAQGIVNNRVPEILVNKRVITLDLSAMVAGS 258
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERLKK+MEEI+ IILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQC
Sbjct: 259 KYRGEFEERLKKVMEEIRADGNIILFIDELHTLIGAGAAEGAIDAANILKPALARGELQC 318
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK+IEKD ALERRFQP+ V EP+V+E I IL+GLR+RYE HH+++ TDE++
Sbjct: 319 IGATTLEEYRKYIEKDSALERRFQPISVGEPTVEEAIIILRGLRDRYEAHHRVKITDESI 378
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA+LS +YISDRFLPDKAIDL+DEA SRVRL P + + LE+E ++ KEK AV
Sbjct: 379 EAAARLSDRYISDRFLPDKAIDLMDEAASRVRLASFTAPPDLKLLEEEAERLKKEKEAAV 438
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
Q+FEKA LRD+E L+A+++ ++ E + +VT DI IV++WTG
Sbjct: 439 SSQEFEKAAGLRDQEQKLRAELA------EQRGAWEHQRYKENAMVTGDDIAQIVASWTG 492
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV+K++ +ES+RLL +E+ LH+R+IGQ++AV A++RA+RRAR GLK+P RPI SFIF G
Sbjct: 493 IPVKKLAEEESERLLHLEDLLHQRLIGQEDAVTAVARAVRRARAGLKDPKRPIGSFIFLG 552
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+EL +ALA FG E+A+IR+DMSE+ME+H VS+L+G+PPGYVG+ EGGQLTEA
Sbjct: 553 PTGVGKTELGRALAEGMFGDEKALIRIDMSEYMEKHAVSRLVGAPPGYVGHDEGGQLTEA 612
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+PY+VVL DEIEKAHP+ FN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVGSS +
Sbjct: 613 VRRKPYSVVLLDEIEKAHPEAFNILLQVLEDGRLTDTKGRTVDFRNTVIIMTSNVGSSFL 672
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
+K +GF DEK + Y ++ V EELK+ FRPEFLNR+DE++VF L + +I
Sbjct: 673 KK--EAMGFAPKKDEK-TDYKNMRGHVMEELKRSFRPEFLNRIDEIVVFHSLQDEHLLKI 729
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
ADI+ ++V RL +ELQV + E + +EG +P +GARPLRRAI RL+ED+++EK+L
Sbjct: 730 ADILTRQVNKRLSENGLELQVEQSAIELIAKEGNDPIFGARPLRRAIQRLIEDALSEKIL 789
Query: 809 AREIKEGDSVIVDVD 823
K GD +IV+ +
Sbjct: 790 EGVFKAGDRIIVEAE 804
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
R+TE+A KV+ +AQEEA+R+GH +G+EH+LLGL++EGEG+AA+ L + D + I +Q+
Sbjct: 4 RYTERAQKVLAIAQEEAKRMGHQVVGTEHVLLGLIQEGEGIAAQALTGMNLDLAKILSQI 63
Query: 154 IRMVG 158
++ G
Sbjct: 64 EQITG 68
>gi|384196661|ref|YP_005582405.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve ACS-071-V-Sch8b]
gi|333109379|gb|AEF26395.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve ACS-071-V-Sch8b]
Length = 863
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/741 (56%), Positives = 564/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKM-----PTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
M+ G ST+ G G +K L+++G NLT A EGKLDPV+GR +
Sbjct: 140 DMIRGNSGTSTDGKGDLANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +V
Sbjct: 200 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD
Sbjct: 320 LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ +I +K+
Sbjct: 380 GALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDDKIAKIAADKD 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
EA++GQDFEKA ELRD + L+A+ K KE S E E+ DV VV E I ++S+
Sbjct: 440 EAIKGQDFEKAAELRDNQEKLEAE-----RKAKEDSWREGES-DVKMVVDEDVIAEVISS 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFI
Sbjct: 494 TTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 554 FAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGEL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V
Sbjct: 674 RDIAKAA-NTGFNLGAN-SESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQV 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++E
Sbjct: 732 RQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISE 791
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L ++++G VIVD + +G
Sbjct: 792 KILMGDLEDGQKVIVDAEGEG 812
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|68535364|ref|YP_250069.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
Length = 885
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/776 (55%), Positives = 580/776 (74%), Gaps = 33/776 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMV----GESTEAVG---AGVGGGSSGNKMPT----------LEEYGTNLTKLAEEGKLD 197
+++ G E+ G A G GSS P+ L+++G NLT+ A++GKLD
Sbjct: 140 QLLSGYEGNDEESGGGEPATAGVGSSPEGAPSRPGQKSNSLVLDQFGRNLTQAAKDGKLD 199
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PVVGR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++
Sbjct: 200 PVVGRENEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDKQLY 259
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+IL
Sbjct: 260 SLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASIL 319
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ T++ILKGLR+RYE
Sbjct: 320 KPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELTVEILKGLRDRYEA 379
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+R++ P+ ++++ ++
Sbjct: 380 HHRVSITDGALKAAAQLADRYINDRFLPDKAVDLIDEAGARMRIKRMTAPKAIQDIDDKI 439
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE--TEAGDVGPV-- 493
++ ++K A+ QDFEKA LRD E L G+E ++ E AG++ V
Sbjct: 440 AEVRRKKEAAIDDQDFEKAAALRDDERKL----------GEERAEKEKAWRAGELDEVAE 489
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
V E I ++ WTGIPV K++ +ES RLL ME+ LHKR+IGQD+AVKA+SRAIRR R G
Sbjct: 490 VGEEQIAEVMGTWTGIPVFKLTEEESTRLLHMEDELHKRIIGQDDAVKAVSRAIRRTRAG 549
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF ++ T S+L G+P
Sbjct: 550 LKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDKFTASRLFGAP 609
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFK
Sbjct: 610 PGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFK 669
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRLD 732
NT+LI TSN+G+ I K +GF + ++D+ Y R+K V +ELK++FRPEFLNR+D
Sbjct: 670 NTVLIFTSNLGTRDISK-AVGMGFSASGEADEDTQYERMKQKVDDELKKHFRPEFLNRID 728
Query: 733 EMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLR 792
+++VF QLT+ ++ ++ D++L V L+ KD+ L++TE+ + + + G++P GARPLR
Sbjct: 729 DIVVFHQLTREQIVQMVDLLLGRVRTALEAKDMGLELTEQAKSLLAKRGFDPVLGARPLR 788
Query: 793 RAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
R I R +ED ++EK+L EI G+ V VDV++ + + + ++ PLP V
Sbjct: 789 RTIQREIEDHLSEKILFGEIGAGEIVTVDVENWDGESKGDDAKFVFDTKPKPLPEV 844
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL++EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 61 TEVKDIIG 68
>gi|425446237|ref|ZP_18826247.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|389733621|emb|CCI02634.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
Length = 795
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/766 (55%), Positives = 551/766 (71%), Gaps = 60/766 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRVIEGMTGRGTGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITTDP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS-------GNKMPTLEEYG 184
E +AA++L G D +R +++ GE V +G SS K L +Y
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLLKNAGEK---VASGRFTASSDYEDQKNAPKGGILAQYS 173
Query: 185 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 244
NL++ + GK+DPV+GR+P+I+RV+QILGRR KNNP L+G PGVGKTAIAEGLAQRI +
Sbjct: 174 RNLSQEVKNGKIDPVIGREPEIQRVIQILGRRGKNNPILLGAPGVGKTAIAEGLAQRIHN 233
Query: 245 GDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 304
GD+P+ + K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GA
Sbjct: 234 GDIPELLRDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIHTLVGA 293
Query: 305 GAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 364
G+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++
Sbjct: 294 GSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQA 353
Query: 365 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHA 424
I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 354 IEILRGLKATYEDFHQVKYAQKAIEAAVHLSSRYINDRFLPDKAIDLLDEAGSRTHLRYS 413
Query: 425 QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 484
+ E+ +E I E +L+
Sbjct: 414 LQSKSPAEVNEESPLINPE----------------------------SLI---------- 435
Query: 485 TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAIS 544
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+S
Sbjct: 436 -------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEAVNAVS 488
Query: 545 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 604
RAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME H
Sbjct: 489 RAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESH 548
Query: 605 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 664
TVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDGRLTD
Sbjct: 549 TVSKLIGAPPGYIGYNEGGQLTEAVRRQPYKVVLFDEIEKAHPDVFNLLLQLLEDGRLTD 608
Query: 665 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR 724
S+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+ELKQYFR
Sbjct: 609 SQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDELKQYFR 668
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+ EGY+P
Sbjct: 669 PEFLNRLDEIIVFRQLTREEVTQIADILIADLGKQLTEKGISVEVTAAFKDLVINEGYDP 728
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
SYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 729 SYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L R
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESR 60
Query: 151 TQVIRMVGEST 161
+ M G T
Sbjct: 61 RVIEGMTGRGT 71
>gi|253681670|ref|ZP_04862467.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
gi|253561382|gb|EES90834.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
Length = 813
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/715 (56%), Positives = 551/715 (77%), Gaps = 13/715 (1%)
Query: 114 GHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSS 173
HNYI EH+LL +++E EGVA +L NL + + ++++ +S ++G
Sbjct: 101 NHNYITPEHILLAMIKETEGVAYAILNNLNINFERLEKELLK---DSNLSIGKTASENME 157
Query: 174 GN---KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVG 230
N PTL++YG +LT +A +GKLDPV+GR + ERV+++L RR KNNPCLIG+PGVG
Sbjct: 158 KNISHNTPTLDKYGRDLTNMAIDGKLDPVIGRDSETERVLEVLCRRIKNNPCLIGDPGVG 217
Query: 231 KTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDE 290
KTAIAEGLAQRI SG++P+ ++ K+V+TLD+ +VAG+KYRGEFE+R+KK+M+EI +
Sbjct: 218 KTAIAEGLAQRIVSGNIPEILKNKRVVTLDISSMVAGSKYRGEFEDRVKKVMDEIYKDGN 277
Query: 291 IILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERR 350
+ILFIDE+HT++GAG AEGAIDA+NILKP+LARGELQCIGATT+DEYRK+IEKD ALERR
Sbjct: 278 VILFIDEIHTIVGAGGAEGAIDASNILKPALARGELQCIGATTIDEYRKYIEKDSALERR 337
Query: 351 FQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAID 410
FQPV V EP+ +E+IQILKGLR++YE HH ++ TDEA+ +A +LS +YI+DR+LPDKAID
Sbjct: 338 FQPVNVGEPTKEESIQILKGLRDKYEAHHGVKITDEAIEAAVELSDRYITDRYLPDKAID 397
Query: 411 LIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI 470
LIDEAG++VR+++ +P + + LE+EL ++ KEK +A+ QDFEKA LRD+E +LK ++
Sbjct: 398 LIDEAGAKVRIKNLTVPPDLKGLEEELEKVGKEKEDAITVQDFEKAASLRDKEKELKDKL 457
Query: 471 SALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLH 530
D K+ S+ T+ +V++ I +VS W+ +P+EK++ E+DRLLK+EE LH
Sbjct: 458 KGFKDNWKKKSQVSTQ------IVSKEQIAQVVSTWSNVPIEKLTEKEADRLLKLEEILH 511
Query: 531 KRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEE 590
KRVIGQ+EAVK+IS+A+RRARVGLK+P RPI SFIF GPTGVGK+EL+KALA FG E
Sbjct: 512 KRVIGQNEAVKSISKAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDEN 571
Query: 591 AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 650
MIR+DMSE+ME+H VS+L+GSPPGYVG+ EGGQLTE VRR PY+VVLFDEIEKAHP+VF
Sbjct: 572 NMIRIDMSEYMEKHAVSRLVGSPPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVF 631
Query: 651 NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR 710
N++LQILEDGRLTDSKG+TVDF+NT++I+TSNVG+S I K +GF D+ + Y R
Sbjct: 632 NILLQILEDGRLTDSKGKTVDFRNTIIILTSNVGASTINKQN-TLGFSNSEDKAEDEYER 690
Query: 711 IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVT 770
+K V ELK+ FRPEFLNR+D++IVF L + ++KEI +ML+EV RLK K++ ++
Sbjct: 691 MKDNVMVELKRSFRPEFLNRIDDIIVFHTLNQEDLKEIVKLMLQEVSSRLKNKEVYIEFD 750
Query: 771 ERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 825
E+ + + +G++ +YGARPLRR I + +ED ++E++L IK+G V V D
Sbjct: 751 EKAEKLLANKGFDTAYGARPLRRTITKTVEDKLSEEILKGVIKKGYHVNATVKDD 805
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
MF RFTE+A KV+ AQE A+ H Y+G+EH+LLG+L+E EG++ ++L + + N+
Sbjct: 2 MFGRFTERAQKVLYYAQEAAQNFKHGYVGTEHILLGILKEDEGISKKLLNEMNVNEENV 60
>gi|221633020|ref|YP_002522245.1| ClpC ATPase [Thermomicrobium roseum DSM 5159]
gi|221155441|gb|ACM04568.1| ClpC ATPase [Thermomicrobium roseum DSM 5159]
Length = 817
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/734 (58%), Positives = 561/734 (76%), Gaps = 16/734 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI A +EARRLGH+YIG+EHLLLGL+REGEG+AA VLE+LG + +R QV+
Sbjct: 83 LTPRARKVIEYAVDEARRLGHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRQQVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+++ + G + K P L+ G +LT+ A GKLDPV+GR +IERV+QIL
Sbjct: 143 QVLAQ-----GTAYQQRAQQTKTPYLDALGFDLTEAARLGKLDPVIGRHNEIERVMQILS 197
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKTAI EGLAQRI +GDVP+ ++GK+++ LD+G LVAGTKYRGEF
Sbjct: 198 RRTKNNPALIGEPGVGKTAIVEGLAQRIVAGDVPEPLQGKRLVALDIGALVAGTKYRGEF 257
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK++ E+K+S ILFIDE+HTL+GAGAAEGA+DAANILKP+L+RGE+Q IGATTL
Sbjct: 258 EERLKKIVAEVKESG-TILFIDELHTLVGAGAAEGAVDAANILKPALSRGEVQTIGATTL 316
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRK+IE+D ALERRFQPV V EP+V+ETI+ILKG+RERYE HHKL+ +DEAL +AA L
Sbjct: 317 DEYRKYIERDAALERRFQPVIVNEPTVEETIEILKGIRERYEEHHKLKISDEALHAAAVL 376
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ +Y++DRFLPDKAIDL+DEA SRVR+ + P +E + L + +E + AV Q+FE
Sbjct: 377 AARYVTDRFLPDKAIDLVDEAASRVRMYRSASPPSLKEARRGLESLRRELDAAVASQEFE 436
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A ELR+RE L +I L +E E G P+VTE DI +VS WTGIP+ ++
Sbjct: 437 LAAELRERERQLVHRIHELEQHWRE------EQGQEEPIVTEEDIAQVVSMWTGIPLTRL 490
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
T+ES+RLL MEE LH+RVIGQDEA+ ++RA+RRAR GLK+P RPI +FIF GPTGVGK
Sbjct: 491 HTEESERLLHMEEALHERVIGQDEAISTLARAVRRARAGLKDPRRPIGTFIFLGPTGVGK 550
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ LA+ALA + FGSE+A+I++DMSEFMERHTVS+L+G+PPGY+GY EGGQLTEAVRR+PY
Sbjct: 551 TLLARALAEFMFGSEDALIKIDMSEFMERHTVSRLVGAPPGYIGYEEGGQLTEAVRRKPY 610
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+ FN++LQI+EDG LTD+KGR VDF+NT+LIMTSN+G+ +I++ G
Sbjct: 611 SVILLDEIEKAHPEAFNILLQIMEDGNLTDAKGRRVDFRNTILIMTSNIGAELIQREG-S 669
Query: 695 IGFDLDYD---EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF + D + + Y +K V +LKQ FRPEFLNR+D +IVF LT V++I D+
Sbjct: 670 LGFAVADDPTKKMQADYTAMKDKVLSQLKQTFRPEFLNRIDAVIVFHPLTPEHVRQIVDL 729
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
LK + +L + I L+VT+ ++ + + GY+ +GARPLRR I L+ED +AE +LA
Sbjct: 730 ELKRIRKQLAEQQIGLEVTDAAKDLLAKRGYDRQFGARPLRRIIQNLIEDPLAEAILAGR 789
Query: 812 IKEGDSVIVDVDSD 825
K G +V+++V D
Sbjct: 790 FKPGSTVVINVRDD 803
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 58/78 (74%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
FE+FTE+A KV+ LAQEEARR HNYIG+EHLLLGL+REGEGVAARVL+++G +R+
Sbjct: 5 FEKFTERARKVLALAQEEARRFNHNYIGTEHLLLGLVREGEGVAARVLQSMGVQLPKVRS 64
Query: 152 QVIRMVGESTEAVGAGVG 169
V ++G V +G
Sbjct: 65 AVEFIIGRGESTVVGEIG 82
>gi|118619352|ref|YP_907684.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
ulcerans Agy99]
gi|118571462|gb|ABL06213.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
ulcerans Agy99]
Length = 849
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/740 (57%), Positives = 563/740 (76%), Gaps = 22/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++V LFDEIEKAH ++ N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVALFDEIEKAHQEISNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFSQTGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLK-TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ D+M+ V ++LK +KD+ L++T++ + + + G++P GARPLRR I R +ED ++
Sbjct: 728 IRMVDLMIGRVANQLKSSKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLS 787
Query: 805 EKMLAREIKEGDSVIVDVDS 824
EK+L E+ G V VDVD+
Sbjct: 788 EKILFEEVGPGQVVTVDVDN 807
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|420156532|ref|ZP_14663374.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
gi|394757462|gb|EJF40494.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
MSTE9]
Length = 821
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/735 (57%), Positives = 556/735 (75%), Gaps = 12/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT ++ +++ +A EA RLGHNY+G+EHLL+ +L EG+ R L++LGA +I ++
Sbjct: 82 FTPRSKRILQIAVMEAARLGHNYVGTEHLLIAILSEGDSYGVRFLQSLGAKSGDILNEIS 141
Query: 155 RMVGESTEAVGA-GVGGGSSG----NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+ ++ A G+ SSG + TL+++G +LT LA +G +DPV+GRQ +IERV
Sbjct: 142 SALSSGEDSAPAPGMSSTSSGKGGKSATKTLDQFGRDLTALAAKGGIDPVIGRQTEIERV 201
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNPCLIGEPGVGKTA+AEGLA +IA G VP+ ++ K+VITLD+ +VAGTK
Sbjct: 202 IQILSRRTKNNPCLIGEPGVGKTAVAEGLALKIAEGQVPELLKNKRVITLDLTGMVAGTK 261
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+K M+E++ + IILFIDE+HT+IGAG+AEG+ DAANILKP+LARG+ Q I
Sbjct: 262 YRGDFEERIKAAMDEVRSAGNIILFIDELHTIIGAGSAEGSTDAANILKPALARGDFQVI 321
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATT++EYRK+IEKD ALERRFQPV V EPS +E I+ILKGLR+RYE HHK++ TDEA+
Sbjct: 322 GATTINEYRKYIEKDAALERRFQPVMVGEPSEEEAIEILKGLRDRYEAHHKVKITDEAID 381
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+A +LS +YI+DRFLPDKAIDL+DEA SRVRLR P + +ELEK ++++ +EK A+
Sbjct: 382 AAVKLSSRYIADRFLPDKAIDLMDEASSRVRLRAFTAPTDLQELEKSIKELEQEKAAAIN 441
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q+FE+A ++RD E K ++ K K E G+V P DI ++VS WTGI
Sbjct: 442 AQEFERAAKVRDEEKKAKEELER--QKNLWTEKRSHEGGEVTP----EDIANVVSVWTGI 495
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV +++ +ES+RLL +EETLH+R++GQ+EAV A+SRAIRR RVGLK+P RP+ SFIF GP
Sbjct: 496 PVVQLTEEESERLLHLEETLHQRLVGQEEAVSAVSRAIRRGRVGLKDPKRPVGSFIFLGP 555
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+EL KALA FG E AMIRLDMSE+ME+HTVS+L+GSPPGYVGY EGGQLTEAV
Sbjct: 556 TGVGKTELTKALAEAMFGDENAMIRLDMSEYMEKHTVSRLVGSPPGYVGYDEGGQLTEAV 615
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+PY+VVLFDEIEKAHPDVFN++LQILEDGRLTD++GR VDFKNT++IMTSNVG+ +I
Sbjct: 616 RRKPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDAQGRKVDFKNTVIIMTSNVGARLIT 675
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+ +GF + ++K S ++K LV ELK FRPEFLNR+D++IVF +LT +++EIA
Sbjct: 676 EKKGSLGFASEENQKLDS-EKVKELVLGELKSTFRPEFLNRVDDIIVFHKLTDEDIREIA 734
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
MLK + RL I + E + +EG++P YGARPLRRAI LED ++E ML
Sbjct: 735 GRMLKTLQKRLSEIGISAEFAEAAVAEIAKEGFDPIYGARPLRRAIQTKLEDRLSELMLE 794
Query: 810 REIKEGDSVIVDVDS 824
++ G+ V+ D ++
Sbjct: 795 GKVHAGNRVVCDFEN 809
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F FTEKA + LA E A LGH YIGSEH++LGLL+EG GVAA VL L + +
Sbjct: 4 FNGFTEKANTALNLAIESAENLGHTYIGSEHIVLGLLKEGTGVAATVLNKLQVTAAQLEQ 63
Query: 152 QVIRMVGESTE 162
+ +G T+
Sbjct: 64 LMSEKIGTGTK 74
>gi|298345554|ref|YP_003718241.1| chaperone ATPase [Mobiluncus curtisii ATCC 43063]
gi|304391110|ref|ZP_07373062.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315656114|ref|ZP_07909005.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235615|gb|ADI66747.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
curtisii ATCC 43063]
gi|304325993|gb|EFL93239.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315493116|gb|EFU82716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 884
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/744 (57%), Positives = 567/744 (76%), Gaps = 26/744 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGHNYIG+EH+LLGLLREG+GVAA+VL LGAD +N+R VI
Sbjct: 80 FTPRARKVLEFSMREALQLGHNYIGTEHILLGLLREGDGVAAQVLIKLGADLNNVRQTVI 139
Query: 155 RMV----GESTEAVG---AGVGGG-----SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G ++ G GVGGG ++G L+++G NLT+ A E KLDPV+GR
Sbjct: 140 ELLSGYQGGQSQQSGRDTVGVGGGRADNPNAGGNSAILDQFGRNLTQAARESKLDPVIGR 199
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
++ERV+QIL RRTKNNP L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG
Sbjct: 200 TKEMERVMQILSRRTKNNPVLVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMG 259
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
LVAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LA
Sbjct: 260 SLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLA 319
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT++EYRK+IEKD ALERRFQPVKV EPSV+ET+ ILKGLR+RYE HH++
Sbjct: 320 RGELQTIGATTIEEYRKYIEKDSALERRFQPVKVEEPSVEETVAILKGLRDRYESHHRVM 379
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL +AAQL+ +Y+SDRFLPDKAIDL+DEAG+R+R++ P E +E+++++ + +
Sbjct: 380 ITDAALAAAAQLADRYVSDRFLPDKAIDLVDEAGARLRIKRMTAPPELKEVDEKIAKTRQ 439
Query: 443 EKNEAVRGQDFEKAGELRDREMDL---KAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
K A+ QDFEKA +LRD E L +A + +G++ S++ VV E I
Sbjct: 440 AKEAAIDAQDFEKAAQLRDEEKHLTEERAAKESQWRQGEDTSES---------VVDEEQI 490
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
+++ TGIPV K++ ES +LL+ME+ LHKR+IGQDEAVKA+S++IRR R GLK+P R
Sbjct: 491 AEVLAMSTGIPVFKLTQAESSKLLRMEDELHKRIIGQDEAVKAVSQSIRRTRAGLKDPKR 550
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
P SF+F+GPTGVGK+ELAKALA + FG E A+++LDMSEF E+HT S+L GSPPGYVGY
Sbjct: 551 PGGSFVFAGPTGVGKTELAKALAEFLFGDENALVQLDMSEFSEKHTASRLFGSPPGYVGY 610
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IM
Sbjct: 611 DEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIM 670
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
T+N+G+ I K G GF E + Y R+K V EELKQ+FRPEFLNR+DE++VF Q
Sbjct: 671 TTNLGTREINK-GVLTGFQAS-GELATDYQRMKGKVQEELKQHFRPEFLNRVDEIVVFPQ 728
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K E+ +I D+M+ ++ DR+ + + LQ+T R + +G++ + GARPLRRA+ R +
Sbjct: 729 LEKGEILQIVDLMIAKLDDRMLDQGMALQITPAARALLAHKGFDKTLGARPLRRAVQREI 788
Query: 800 EDSMAEKMLAREIKEGDSVIVDVD 823
ED ++EK+L E+ EG +V VDV+
Sbjct: 789 EDVLSEKILFSELGEGQTVTVDVE 812
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 56/69 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EARRL NYIG+EHLLLGL+ EG+G+AAR LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVR 60
Query: 151 TQVIRMVGE 159
QVI ++GE
Sbjct: 61 AQVIEIIGE 69
>gi|283457250|ref|YP_003361820.1| ATPase [Rothia mucilaginosa DY-18]
gi|283133235|dbj|BAI64000.1| ATPase with chaperone activity, ATP-binding subunit [Rothia
mucilaginosa DY-18]
Length = 856
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/759 (55%), Positives = 566/759 (74%), Gaps = 22/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +L H YIG+EH+LLG++R EGVA +VL LGA+P+ +R V+
Sbjct: 80 FTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRANEGVANQVLVKLGAEPAAVRQAVM 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ S E AGVG G+S P L+++G NLT A EG+LDPV+GR +
Sbjct: 140 DLISGYPGNNSGEKETAGVGAGNSREGTPAGSTILDQFGRNLTAAAREGELDPVIGRHKE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATTLDEYRKHIEKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TD
Sbjct: 320 LQTIGATTLDEYRKHIEKDAALERRFQPIQVEEPSQELAVQILKGVRDKYEAHHRVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ +A L+ +YISDRFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ ++K
Sbjct: 380 EAIETAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKLLDEKAAKLRQQKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
+A+ QD+EKA LRD+E + A+ +E KA E GD VT I +++A
Sbjct: 440 DAINSQDYEKAAGLRDQEQKVLAE-------KEEAEKAWREGGDAFGTVTPEVIAEVLAA 492
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TG+PV K++ +ES RLL ME+ LHKRVIGQ+ A+ A+SRAIRR R GLK+P RP SFI
Sbjct: 493 STGVPVYKITEEESTRLLTMEQELHKRVIGQEHAIAALSRAIRRTRAGLKDPRRPGGSFI 552
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+++I LDMSE+ E+HTVS+L G+PPGYVGY EGGQL
Sbjct: 553 FAGPTGVGKTELAKALAEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQL 612
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS
Sbjct: 613 TEKVRRKPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGS 672
Query: 686 SVIEKGGRRI--GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
+ RRI GF D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++
Sbjct: 673 RDV---NRRIPVGFQA-MDDTAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSES 728
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ +I D+ + + RL +D+ +++T + + +GY+PS GARPLRR + R +ED++
Sbjct: 729 EILQIVDLFVGRLAKRLAEQDMSIELTNAAKVLMAAKGYDPSMGARPLRREMQRNIEDAL 788
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
+EK+L +IK G+ + VDV+ +G+ SS + LA
Sbjct: 789 SEKILFGDIKPGEKITVDVEGEGDSAKFVFSSQPMKELA 827
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEG+ AR LE+LG + +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVR 60
Query: 151 TQVIRMVGESTEA 163
QV +VG +A
Sbjct: 61 EQVQDIVGPGPQA 73
>gi|213965131|ref|ZP_03393329.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
gi|213952245|gb|EEB63629.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
Length = 910
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/744 (55%), Positives = 568/744 (76%), Gaps = 22/744 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGH YIG+EHLLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLEYSLREALQLGHKYIGTEHLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV----GESTEA------VGAGVGG----GSSGNKMPTLEEYGTNLTKLAEEGKLDPVV 200
+++ G+ ++ VGA G G+ + L+++G NLT A EGKLDPV+
Sbjct: 140 QLLSGFQGDESDGSPEQRPVGATSGARVQEGNHQSGSLVLDQFGRNLTVAAREGKLDPVI 199
Query: 201 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLD 260
GR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++ +LD
Sbjct: 200 GREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGRVPETLKDKQLYSLD 259
Query: 261 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPS 320
+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP
Sbjct: 260 LGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPK 319
Query: 321 LARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHK 380
LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSVD TI+IL+G+R++YE HH+
Sbjct: 320 LARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVDLTIEILRGVRDKYEAHHR 379
Query: 381 LRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI 440
+ +D+ALV+AA LS +YI+DRFLPDKA+DLIDEAG+R+R++ P + +E++ ++ +
Sbjct: 380 VSISDKALVAAATLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPADLQEIDSKIADV 439
Query: 441 TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 500
++K A+ QDFEKA LRD+E L + ++ K+ E+ D + E I
Sbjct: 440 RRQKEAAIDEQDFEKAAGLRDKERKLGEERR---EREKKWRAGES---DTIAEIGEEQIA 493
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
++++WTGIPV K++ +ES RLL+ME+ LHKR+IGQ+EAV A+SRAIRR R GLK+P RP
Sbjct: 494 EVLASWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEEAVSAVSRAIRRTRAGLKDPKRP 553
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
SFIF+GP+GVGK+EL+KALA + FG E+A+I++DM EF +R T S+L G+PPGYVGY
Sbjct: 554 SGSFIFAGPSGVGKTELSKALAEFLFGEEDALIQIDMGEFHDRFTASRLFGAPPGYVGYE 613
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTDS+GR VDFKNT+LI T
Sbjct: 614 EGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDSQGRVVDFKNTVLIFT 673
Query: 681 SNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
SN+G+S I K +GF + ++D Y R+K V +ELK++FRPEFLNR+DE++VF+Q
Sbjct: 674 SNLGTSDISK-AVGMGFSGVGEADEDGKYERMKDKVHDELKKHFRPEFLNRIDEIVVFKQ 732
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L++ E+ ++ D+ML V D+L K I +++++R + + + G++P GARPLRR I R +
Sbjct: 733 LSQAEIVQMVDLMLTRVSDQLGEKRITMEISDRAKNLLAKRGFDPVLGARPLRRTIQREI 792
Query: 800 EDSMAEKMLAREIKEGDSVIVDVD 823
ED ++EK+L E+ G++V +DV+
Sbjct: 793 EDQLSEKILYGEVGLGETVFIDVE 816
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EH+LLGL+ EG+GVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARELNHNYIGTEHILLGLISEGDGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVGESTE 162
++V+ ++G ++
Sbjct: 61 SEVVDIIGRGSQ 72
>gi|422302574|ref|ZP_16389935.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
gi|389788171|emb|CCI16339.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
Length = 795
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/766 (56%), Positives = 552/766 (72%), Gaps = 60/766 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRLIEGMTGRGTGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITADP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG----NKMP---TLEEYG 184
E +AA++L G D +R +++ GE V +G S P L +YG
Sbjct: 117 ESLAAKILIMQGVDLLQLRGLLLKNAGEK---VASGRFTAKSDYEDQKNAPQGGILAQYG 173
Query: 185 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 244
NL++ + GK+DPV+GR+P+IERVVQILGRRTK+NP L+GEPGVGKTAIAEGLAQRI +
Sbjct: 174 RNLSQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHN 233
Query: 245 GDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 304
GD+P+ ++ K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GA
Sbjct: 234 GDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGSIILFIDEIHTLVGA 293
Query: 305 GAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 364
G+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++
Sbjct: 294 GSMGGAMDASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQA 353
Query: 365 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHA 424
I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 354 IEILQGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYS 413
Query: 425 QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 484
E+ +E I E +L+
Sbjct: 414 LQSTSPAEVNEESPLINPE----------------------------SLI---------- 435
Query: 485 TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAIS 544
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+S
Sbjct: 436 -------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEAVNAVS 488
Query: 545 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 604
RAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME H
Sbjct: 489 RAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESH 548
Query: 605 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 664
TVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDG LTD
Sbjct: 549 TVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTD 608
Query: 665 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR 724
S+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VTEELKQYFR
Sbjct: 609 SQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTEELKQYFR 668
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+ EGY+P
Sbjct: 669 PEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDP 728
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
SYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 729 SYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L R
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESR 60
Query: 151 TQVIRMVGEST 161
+ M G T
Sbjct: 61 RLIEGMTGRGT 71
>gi|381398100|ref|ZP_09923508.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
gi|380774766|gb|EIC08062.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
Length = 841
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/756 (56%), Positives = 569/756 (75%), Gaps = 31/756 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMV----GESTEAVGAGVG--------GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
+++ G+ V AG G GGS+ L+++G NLT+ A + KLDPV+GR
Sbjct: 140 QLLSGYQGKEPAGVAAGAGEQNQQAAQGGSA-----VLDQFGRNLTQAARDNKLDPVIGR 194
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+ +IERV+QIL RR+KNNP LIGEPGVGKTA+ EGLAQ I DVP+T++ K+V +LD+G
Sbjct: 195 EKEIERVMQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKNDVPETLKDKQVYSLDLG 254
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
L+AG++YRG+FEERLKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LA
Sbjct: 255 SLIAGSRYRGDFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLA 314
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATTLDEYRKH EKD ALERRFQP++V EPS+ I ILKGLR+RYE HHK++
Sbjct: 315 RGELQTIGATTLDEYRKHFEKDAALERRFQPIQVAEPSLPHAINILKGLRDRYEAHHKVQ 374
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD A+V+AA L+ +YISDRFLPDKAIDLIDEAG+R+RL P E RE ++++ ++ +
Sbjct: 375 ITDGAIVAAANLADRYISDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDEKIAKVRE 434
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG--PVVTEVDIQ 500
+K A QDFEKA LRD E L A+ L + + +GDV VV E I
Sbjct: 435 DKETASEEQDFEKAAALRDEEKSLLAERLRL--------EKQWRSGDVASHAVVDEGLIA 486
Query: 501 HIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRP 560
+++ TGIPV K++ +E+ RL+ ME+ LH+RVIGQ+EA+ A+SR IRR R GLK+P RP
Sbjct: 487 EVLAQATGIPVFKLTEEETSRLVFMEKALHQRVIGQEEAIAALSRTIRRQRAGLKDPKRP 546
Query: 561 IASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYT 620
SFIF+GPTGVGK+ELAKALA + F E A+I LDMSEF E+HTVS+L G+PPG+VG+
Sbjct: 547 SGSFIFAGPTGVGKTELAKALAEFLFDDEGALISLDMSEFGEKHTVSRLFGAPPGFVGFE 606
Query: 621 EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMT 680
EGGQLTE VRR+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR VDFKNT++IMT
Sbjct: 607 EGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMT 666
Query: 681 SNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQL 740
+N+GSS I G +GF ++ + + ++Y R+K V EELK++F+PEFLNR+D++IVF QL
Sbjct: 667 TNLGSSAI--AGGPVGFQVEGNSQ-TTYERMKGKVDEELKRHFKPEFLNRVDDVIVFPQL 723
Query: 741 TKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLE 800
K E+++I + K + +RL +D+ +++T+ ++R++E G++P+ GARPLRRA+ R +E
Sbjct: 724 NKQELRQIVGLFTKRLSERLLDRDMTVELTDAAKDRLIEIGFDPTLGARPLRRAMQREVE 783
Query: 801 DSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSG 836
D ++E++L E+ GD V VD + +G +G G
Sbjct: 784 DQLSERILHGELNPGDHVKVDAE-NGTFLFEHGPRG 818
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQV 153
QV
Sbjct: 61 EQV 63
>gi|418046563|ref|ZP_12684651.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
gi|353192233|gb|EHB57737.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
Length = 845
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/739 (57%), Positives = 568/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E AG GG + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGESGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILKGLRDRYEAHHRVSITDAAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAANLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AV+A+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVRAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +LKTKD+E+ +T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 728 IQMVDLMVSRVSKQLKTKDMEMDLTDKAKALLAKRGFDPVLGARPLRRTIQREIEDALSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQLVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|420153551|ref|ZP_14660509.1| Clp amino terminal domain protein [Actinomyces massiliensis F0489]
gi|394759147|gb|EJF41931.1| Clp amino terminal domain protein [Actinomyces massiliensis F0489]
Length = 851
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/763 (56%), Positives = 570/763 (74%), Gaps = 28/763 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGLLREGEGVAA+VL LGAD S +R V+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLLREGEGVAAQVLTKLGADLSTVRQTVM 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+M+ E E V AG GSS +P+ L+++G NLT A EGKLDPV+GR ++ER
Sbjct: 140 QMLSGYEGKETVTAG---GSSKEGVPSGSAILDQFGRNLTAAAREGKLDPVIGRHKEMER 196
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+QIL RRTKNNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG+
Sbjct: 197 VMQILSRRTKNNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGS 256
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++E++ +IILFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ
Sbjct: 257 RYRGDFEERLKKVLKEVRTRGDIILFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQT 316
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK IEKD ALERRFQPV V +PS++ET+ IL GLR+RYE H++ TD+A+
Sbjct: 317 IGATTLEEYRK-IEKDAALERRFQPVTVDQPSIEETVGILTGLRDRYEAFHRVVITDDAI 375
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA+L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P E RE++ + ++ +EK A+
Sbjct: 376 QAAAKLADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPELREIDDRIAKVKREKESAI 435
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFE+A LRD E L + +E + +GD+ V EVD + +++
Sbjct: 436 DDQDFERAAALRDDERRLSEE--------REDKEKAWRSGDLDQV-AEVDEGLVAEVLAM 486
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL ME LHKR+IGQD+A++A+S++IRR R GLK+P RP SFI
Sbjct: 487 STGIPVVKLTEAESAKLLGMETELHKRIIGQDKAIEALSKSIRRTRAGLKDPKRPGGSFI 546
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQL
Sbjct: 547 FAGPTGVGKTELAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQL 606
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRRRP++VVLFDE+EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS
Sbjct: 607 TEKVRRRPFSVVLFDEVEKAHPDIFNSLLQILEDGHLSDAQGREVDFKNTVIIMTTNLGS 666
Query: 686 SVIEKGGRRIGFDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I G+ + E + Y +K+ V ELKQ FRPEFLNR+D++IVF QLTK E
Sbjct: 667 KDI---GKSVATGFQSTEGGTMDYEEMKAHVNRELKQQFRPEFLNRVDDLIVFPQLTKDE 723
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+M+ + RL +++ +++T+ +E + E G++P GARPLRRAI R +ED+++
Sbjct: 724 VRQIVDLMITRLAGRLVEQEMTIELTDAAKELLAERGFDPVLGARPLRRAIQRDIEDALS 783
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPL 845
EK+L EI+ G VIVD + +G + G P+ +DPL
Sbjct: 784 EKILFGEIERGQKVIVDAEGEGILGEFTFRGEPWDPKIGSDPL 826
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE++ +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDVSLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV+ ++GE A
Sbjct: 61 AQVVDIIGEGQSA 73
>gi|315656011|ref|ZP_07908909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
gi|315490075|gb|EFU79702.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
Length = 884
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/744 (57%), Positives = 566/744 (76%), Gaps = 26/744 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGHNYIG+EH+LLGLLREG+GVAA+VL LGAD +N+R VI
Sbjct: 80 FTPRARKVLEFSMREALQLGHNYIGTEHILLGLLREGDGVAAQVLIKLGADLNNVRQTVI 139
Query: 155 RMV----GESTEAVG---AGVGGG-----SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G + G GVGGG +SG L+++G NLT+ A E KLDPV+GR
Sbjct: 140 ELLSGYQGGQAQQSGRDTVGVGGGRADNPNSGGNSAILDQFGRNLTQAARESKLDPVIGR 199
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
++ERV+QIL RRTKNNP L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG
Sbjct: 200 TKEMERVMQILSRRTKNNPVLVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMG 259
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
LVAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LA
Sbjct: 260 SLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLA 319
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT++EYRK+IEKD ALERRFQPVKV EPSV+ET+ ILKGLR+RYE HH++
Sbjct: 320 RGELQTIGATTIEEYRKYIEKDSALERRFQPVKVEEPSVEETVAILKGLRDRYESHHRVM 379
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL +AAQL+ +Y+SDRFLPDKAIDL+DEAG+R+R++ P E +E+++++ + +
Sbjct: 380 ITDAALAAAAQLADRYVSDRFLPDKAIDLVDEAGARLRIKRMTAPPELKEVDEKIAKTRQ 439
Query: 443 EKNEAVRGQDFEKAGELRDREMDL---KAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
K A+ QDFEKA +LRD E L +A + +G++ S++ VV E I
Sbjct: 440 AKEAAIDAQDFEKAAQLRDEEKHLTEERAAKESQWRQGEDTSES---------VVDEEQI 490
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
+++ TGIPV K++ ES +LL+ME+ LHKR+IGQD+AVKA+S++IRR R GLK+P R
Sbjct: 491 AEVLAMSTGIPVFKLTQAESSKLLRMEDELHKRIIGQDDAVKAVSQSIRRTRAGLKDPKR 550
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
P SF+F+GPTGVGK+ELAKALA + FG E A+++LDMSEF E+HT S+L GSPPGYVGY
Sbjct: 551 PGGSFVFAGPTGVGKTELAKALAEFLFGDENALVQLDMSEFSEKHTASRLFGSPPGYVGY 610
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTE VRR+P++VVLFDE+EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IM
Sbjct: 611 DEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIM 670
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
T+N+G+ I K G GF E + Y R+K V EELKQ+FRPEFLNR+DE++VF Q
Sbjct: 671 TTNLGTREINK-GVLTGFQAS-GELATDYQRMKGKVQEELKQHFRPEFLNRVDEIVVFPQ 728
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
L K E+ +I D+M+ ++ DR+ + + LQ+T R + +G++ + GARPLRRA+ R +
Sbjct: 729 LEKGEILQIVDLMIAKLDDRMLDQGMALQLTPAARALLAHKGFDKTLGARPLRRAVQREI 788
Query: 800 EDSMAEKMLAREIKEGDSVIVDVD 823
ED ++EK+L E+ EG +V VDV+
Sbjct: 789 EDVLSEKILFSELGEGQTVTVDVE 812
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 56/69 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EARRL NYIG+EHLLLGL+ EG+G+AAR LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVR 60
Query: 151 TQVIRMVGE 159
QVI ++GE
Sbjct: 61 AQVIEIIGE 69
>gi|452910065|ref|ZP_21958747.1| ATP-dependent Clp protease [Kocuria palustris PEL]
gi|452834683|gb|EME37482.1| ATP-dependent Clp protease [Kocuria palustris PEL]
Length = 884
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/734 (56%), Positives = 560/734 (76%), Gaps = 21/734 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLG++R GEGVAA+VL LG +P +R+ V+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGIIRAGEGVAAQVLTKLGTEPQKVRSTVL 139
Query: 155 RMV------GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQP 204
++ GE E GAG +SG P L+++G NLT A E +LDPV+GR
Sbjct: 140 DLISGYQSGGEEKETAGAGAR--TSGEGTPAGSAVLDQFGRNLTAAARESQLDPVIGRAR 197
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G L
Sbjct: 198 EMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLKDKHLYTLDLGSL 257
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 258 VAGSRYRGDFEERLKKVLKEIKSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARG 317
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EPS +I+ILKGLR++YE HH++ +
Sbjct: 318 ELQTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSEAHSIEILKGLRDKYEAHHRVSIS 377
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEAL +A S +YISDRFLPDKAIDLIDEAG+R+R++ P E +EL++ + ++ + K
Sbjct: 378 DEALEAAVHQSARYISDRFLPDKAIDLIDEAGARLRIKRMTAPPEIKELDERIAKVKQAK 437
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
EA+ GQD+EKA LRD+E L +S DK A E GD VT I ++S
Sbjct: 438 EEAIEGQDYEKAASLRDQEQKL---LSERDDK----DTAWREGGDQVAEVTPDVISDVLS 490
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
A TG+P+ +++ +ES RL++MEE LHKRV+GQ+EA+KA+SR+IRR R GLK+P RP SF
Sbjct: 491 AATGVPLYRLTDEESGRLIRMEEELHKRVVGQEEAIKALSRSIRRTRAGLKDPKRPGGSF 550
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELA++LA + FG E+++I LDMSE+ E+HTVS+L G+PPGYVG+ EGGQ
Sbjct: 551 IFAGPTGVGKTELARSLAEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGFEEGGQ 610
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G
Sbjct: 611 LTEKVRRKPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLG 670
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I + +GF D ++Y R++ V +ELK++FRPEFLNR+DE++VF QL + E
Sbjct: 671 TRDISR-SVPMGFQAGNDST-TNYERMQQRVNDELKEHFRPEFLNRVDEIVVFPQLEEKE 728
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+ + + +RL+ +D+ + V++ ++ + + GY+P+ GARPLRR I R +ED+++
Sbjct: 729 IVQIVDLFVARLQERLREQDMSIVVSDAAKKVLAKRGYDPTMGARPLRRTIQREIEDTLS 788
Query: 805 EKMLAREIKEGDSV 818
EK+L +IKEG+ V
Sbjct: 789 EKILFGDIKEGERV 802
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ E EGVAA+ L++LG + R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHENEGVAAKALDSLGITLNGAR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G +A
Sbjct: 61 EQVQDIIGPGQQA 73
>gi|302876561|ref|YP_003845194.1| ATPase AAA-2 domain-containing protein [Clostridium cellulovorans
743B]
gi|307687233|ref|ZP_07629679.1| ATPase AAA-2 domain-containing protein [Clostridium cellulovorans
743B]
gi|302579418|gb|ADL53430.1| ATPase AAA-2 domain protein [Clostridium cellulovorans 743B]
Length = 812
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/736 (56%), Positives = 561/736 (76%), Gaps = 17/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +++ L+ EAR L HNY+ EH+LL L++EGEGVA +L NLG D +R ++
Sbjct: 82 LTPRTKRLLDLSFSEARALSHNYVSPEHILLALIKEGEGVAFTILNNLGVDFKRLRDNIV 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKM-----PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+ G G NK PTL+++G +LTK+A+E KLDPV+GR + ERV
Sbjct: 142 DSLS------GKQQQGDIKDNKTHSMPTPTLDQFGRDLTKMAKEAKLDPVIGRDKETERV 195
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
++IL RRTKNNPCLIGEPGVGKTAIAEGLAQ+I G++P+ ++ K+V+TLD+ L+AG+K
Sbjct: 196 LEILSRRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILKDKRVVTLDLSSLIAGSK 255
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFEERLKK+M EI ++ ++LFIDE+HT++GAG AEGAIDA+NILKPSLARGE+QCI
Sbjct: 256 YRGEFEERLKKVMAEITKAGNVLLFIDEIHTIVGAGGAEGAIDASNILKPSLARGEIQCI 315
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQPVKV EP+ +E + ILKGLR++YE HH+++ TD A+
Sbjct: 316 GATTLDEYRKYIEKDSALERRFQPVKVGEPTKEEALLILKGLRDKYEAHHRVKITDAAID 375
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+A LS +YI+DR+LPDKAIDLIDEAG+RVR+++ P + + LE+EL +I+KEK +A+
Sbjct: 376 AAVNLSDRYITDRYLPDKAIDLIDEAGARVRIQNLTAPPDLKSLEEELEKISKEKADAIG 435
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
QDFEKA LRD E + K ++ L K + + TE +VG E +I +VS WT +
Sbjct: 436 VQDFEKAARLRDTEKETKERLEKLSKDWKN-NNSRTENQEVG----EEEIATVVSKWTNV 490
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PVEK++ ES+RLLK+EE LH RVIGQ+EAV +++RA+RRARVGLK+P RPI SFIF GP
Sbjct: 491 PVEKLTEKESERLLKLEEILHNRVIGQEEAVISVARAVRRARVGLKDPKRPIGSFIFLGP 550
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+EL KALA F +E+ MIR+DMSE+ME+H+V++LIGSPPGYVGY EGGQLTE V
Sbjct: 551 TGVGKTELTKALAEAMFDNEKNMIRVDMSEYMEKHSVARLIGSPPGYVGYDEGGQLTEKV 610
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR PY+V+LFDEIEKAHPDVFN++LQILEDG LTD KG+ V+FKNT++IMTSNVG+ I+
Sbjct: 611 RRNPYSVILFDEIEKAHPDVFNVLLQILEDGILTDGKGKVVNFKNTIIIMTSNVGAHSIK 670
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
K + +GF+ D +S Y ++K + +ELKQ F+PEFLNR+D++IVF +L + ++ EI
Sbjct: 671 K-QKSLGFNTAGDINNSEYEKMKDNIMDELKQSFKPEFLNRIDDIIVFHKLEEKDLSEIV 729
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+MLK V DRLK ++I ++ E + + +EG++ +YGARPLRR I + +ED ++E++L
Sbjct: 730 KLMLKNVSDRLKEQEIFIEFDEEAEKLLAKEGFDTTYGARPLRRTITKTVEDKLSEEILK 789
Query: 810 REIKEGDSVIVDVDSD 825
+K+ D VIV V+ +
Sbjct: 790 GNVKKSDRVIVTVEDN 805
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A K+I AQEEA+ L H YIG+EH+LLG+L+E G++ + L + N+
Sbjct: 2 MFGRFTERAQKIIYFAQEEAQNLQHGYIGTEHILLGILKEEGGLSKQALNEM-----NVT 56
Query: 151 TQVIRMVGESTEAVG 165
+ +R + E E G
Sbjct: 57 LEKVRELIEEYEGKG 71
>gi|227497047|ref|ZP_03927298.1| ATP-dependent protease, ATPase subunit [Actinomyces urogenitalis
DSM 15434]
gi|226833465|gb|EEH65848.1| ATP-dependent protease, ATPase subunit [Actinomyces urogenitalis
DSM 15434]
Length = 860
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/762 (56%), Positives = 568/762 (74%), Gaps = 26/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGLLREGEGVAA+VL LGAD S +R V+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLLREGEGVAAQVLTKLGADLSTVRQTVM 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+M+ E EAV AG G S P+ L+++G NLT A EGKLDPV+GR ++ER
Sbjct: 140 QMLSGYEGKEAVTAG---GPSDKGTPSGSAILDQFGRNLTAAAREGKLDPVIGRHKEMER 196
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+QIL RRTKNNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG+
Sbjct: 197 VMQILSRRTKNNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGS 256
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++E++ +IILFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ
Sbjct: 257 RYRGDFEERLKKVLKEVRTRGDIILFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQT 316
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK IEKD ALERRFQPV V +PS++ETI IL GLR+RYE H++ TD+A+
Sbjct: 317 IGATTLEEYRK-IEKDAALERRFQPVTVDQPSIEETIGILNGLRDRYEAFHRVVITDDAI 375
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA+L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P E R ++ ++ ++ +EK A+
Sbjct: 376 EAAAKLADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPELRAIDDKIAEVKREKEAAI 435
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VTEVDIQHIVSAW 506
QDFE+A LRD E L + +E +A ++G+V V V E + +++
Sbjct: 436 DDQDFERAAALRDDERRLAEE--------RETKEAAWKSGEVEQVAEVNEELVAEVLAMS 487
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ ES +LL ME LHKR+IGQD+A++A+S++IRR R GLK+P RP SFIF
Sbjct: 488 TGIPVVKLTEAESAKLLGMEAELHKRIIGQDKAIEALSKSIRRTRAGLKDPKRPGGSFIF 547
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQLT
Sbjct: 548 AGPTGVGKTELAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLT 607
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRRRP++VVLFDE+EKAHPD+FN +LQILEDG LTD++GR VDFKNT++IMT+N+GS
Sbjct: 608 EKVRRRPFSVVLFDEVEKAHPDIFNSLLQILEDGHLTDAQGRVVDFKNTVIIMTTNLGSK 667
Query: 687 VIEKGGRRIGFDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I G+ + E + Y +K+ V ELK FRPEFLNR+D++IVF QLTK EV
Sbjct: 668 DI---GKAVATGFQSTEGGTMEYEEMKAHVNRELKSQFRPEFLNRVDDLIVFPQLTKAEV 724
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+M+ + RL +++ +++T+ +E + E G++P GARPLRRAI R +ED+++E
Sbjct: 725 RQIVDLMIARLDKRLVEQEMTIELTDAAKELLAERGFDPVLGARPLRRAIQRDIEDALSE 784
Query: 806 KMLAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPL 845
K+L EI+ G VIVD +G + G P+ +DPL
Sbjct: 785 KILFGEIERGQKVIVDAQGEGILGEFTFRGEPWDPKIGSDPL 826
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE++ +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV+ ++GE A
Sbjct: 61 GQVVEIIGEGQAA 73
>gi|220930935|ref|YP_002507843.1| ATPase AAA-2 domain-containing protein [Halothermothrix orenii H
168]
gi|219992245|gb|ACL68848.1| ATPase AAA-2 domain protein [Halothermothrix orenii H 168]
Length = 806
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/742 (59%), Positives = 568/742 (76%), Gaps = 23/742 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLG-ADPSNIRTQV 153
T ++ KV+ LA +EARRLGHNYIG+EH+LLGL+REGEGVA R+L NL D NIR QV
Sbjct: 80 LTPRSKKVLNLALDEARRLGHNYIGTEHILLGLIREGEGVAVRILANLNNGDLQNIREQV 139
Query: 154 IRMVGESTEAVGAGVGG-----GSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
I ++G G G G+ ++ P L+EY +LTKLA++ KLDPV+GR+ +IER
Sbjct: 140 IELLG--------GKGNTRHQDGTRRSETPNLDEYSRDLTKLADQVKLDPVIGREKEIER 191
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI VPD + K+V+ LD+ +VAG+
Sbjct: 192 VIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVDESVPDVLLNKRVVALDLSSIVAGS 251
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFE+RLK +M +I +S IILFIDE+HTL+GAGAAEGAIDAANILKP+LARGELQ
Sbjct: 252 KYRGEFEKRLKAVMNDIVKSGNIILFIDELHTLVGAGAAEGAIDAANILKPALARGELQA 311
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKDPALERRFQ + V EP+ +ETI+ILKGLR+ YE HHK++ +DEA+
Sbjct: 312 IGATTLDEYRKYIEKDPALERRFQSILVEEPTPEETIEILKGLRDPYEAHHKVKISDEAI 371
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+A LS++YI+DRFLPDKAIDLIDEA SRVRL P E ++L K+L ++ KEK AV
Sbjct: 372 KAAVNLSHRYITDRFLPDKAIDLIDEAASRVRLGSDTRPPELKDLNKKLEEVKKEKEAAV 431
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
+ Q+FEKA ELRD+E +L+ + + K E E VT +I IVS+WTG
Sbjct: 432 KNQEFEKAAELRDKEKELEKEFENI------QEKWEKEKEKSESTVTTEEIAEIVSSWTG 485
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K+ E+ +LL +EE LHKRV+GQDEA++A+S+A+RRAR GLK+P RPI SFIF G
Sbjct: 486 IPVTKLEQAETAKLLHLEEELHKRVVGQDEAIQAVSQAVRRARAGLKDPKRPIGSFIFLG 545
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELA+ALA F EE M+R+DMSE+ME+H VS+L+GSPPGYVG+ EGGQLTE
Sbjct: 546 PTGVGKTELARALAEAMFNDEETMVRIDMSEYMEKHAVSRLVGSPPGYVGHEEGGQLTEP 605
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
+RRRPY+VVLFDEIEKAHPDVFN++LQILEDG LTD+ GR VDFKNT++IMTSNVG++ I
Sbjct: 606 IRRRPYSVVLFDEIEKAHPDVFNILLQILEDGHLTDTHGRRVDFKNTVVIMTSNVGANFI 665
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
EK R+GF DEK +Y +K + +L++ FRPEFLNR+DE+IVF L + +K+I
Sbjct: 666 EKQS-RLGFKAGNDEK-QNYEDMKDKLMSDLRRTFRPEFLNRVDEIIVFHALNRDHIKQI 723
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ML +V RL+ K+I+++VTE + + E+G++ +GARPLRR I R++E+ ++EK+L
Sbjct: 724 VDLMLDDVKKRLEDKEIDIEVTEGAKHVLAEKGFDSEFGARPLRRTIQRMVENPLSEKIL 783
Query: 809 AREIKEGDSVIVDVDSDGNVTV 830
++KEGD V+VD + DG V V
Sbjct: 784 EGKVKEGDKVVVD-EQDGKVVV 804
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 57/78 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF RFTE+A KV+ LA++EA HNY+G+EH+LLGL++EG+GVAA+ L+++G ++
Sbjct: 1 MFGRFTERARKVLSLAEKEAVGFKHNYVGTEHILLGLVKEGQGVAAKALKDVGISEEKVK 60
Query: 151 TQVIRMVGESTEAVGAGV 168
Q+ +++GE + V +
Sbjct: 61 EQITKLIGEGNQEVSGPI 78
>gi|358446330|ref|ZP_09156877.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
gi|356607742|emb|CCE55201.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
Length = 905
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/753 (55%), Positives = 570/753 (75%), Gaps = 33/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLTKLGADLPRVRQQVI 139
Query: 155 RMV-------GESTEA----VGAGVGGGSSGNKMP----------TLEEYGTNLTKLAEE 193
+++ GE EA VGAG G + G + P L+++G NLT+ A++
Sbjct: 140 QLLSGYEGNQGEKPEAGPGPVGAGTGPQNPGRQGPGNQGERSNSLVLDQFGRNLTQAAKD 199
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 200 GKLDPVVGRESEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 259
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 260 KQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 319
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPVKV EPS+++TI IL+GLR+
Sbjct: 320 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVKVDEPSMEDTITILRGLRD 379
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
+YE HH++ YTD+AL +AA LS +YI+DRFLPDKA+DL+DEAG+R+R++ P+ R++
Sbjct: 380 KYEAHHRVSYTDDALKAAASLSDRYINDRFLPDKAVDLLDEAGARMRIKRMTAPKGIRDV 439
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ KEK A+ QDFEKA LRD E L + SA + + +GD+ +
Sbjct: 440 DDRIAEVRKEKESAIDAQDFEKAAGLRDTERKLHEERSA--------KEKQWRSGDLEEI 491
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
++E I +++ WTGIPV K++ ES RLL ME+ LHKR+IGQ+EAVKA+SRAIRR R
Sbjct: 492 AEISEEQIAEVLAHWTGIPVLKLTEKESSRLLNMEDELHKRIIGQNEAVKAVSRAIRRTR 551
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FGS++ +I++DM EF +R T S+L G
Sbjct: 552 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGSDDDLIQIDMGEFHDRFTASRLFG 611
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 612 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 671
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D+ Y+R+K+ V +ELK++FRPEFLNR
Sbjct: 672 FKNTVLIFTSNLGTQDISK-AVGLGFTSANETDSDAQYDRMKNKVNDELKKHFRPEFLNR 730
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ E+ ++ ++++ V +L +D+ +++T++ ++ + + G++P GARP
Sbjct: 731 IDEIVVFHQLTRDEIVQMVELLIGRVEVQLAERDMGIELTQKAKDLLAKRGFDPVLGARP 790
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED ++EK+L EI G+ + VDV+
Sbjct: 791 LRRTIQREIEDQLSEKILYGEIGAGEIISVDVE 823
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL++EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIQEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G T+
Sbjct: 61 GEVEAIIGHGTQ 72
>gi|219848346|ref|YP_002462779.1| ATPase AAA-2 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219542605|gb|ACL24343.1| ATPase AAA-2 domain protein [Chloroflexus aggregans DSM 9485]
Length = 834
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/746 (57%), Positives = 548/746 (73%), Gaps = 27/746 (3%)
Query: 93 ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 152
+ T +A KVI A EEA RL H+YIG+EHLLLGL+R GEGVA VL+ LG +R Q
Sbjct: 81 QELTARAQKVIKYAIEEANRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRNQ 140
Query: 153 VIRMV-----GESTEAVGAGVGGGSSG--NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
V+R + G + EA + G ++ +K P L+ GT+LT++AE+G+LDP++GRQ +
Sbjct: 141 VMRTLRHGTAGATGEARVSTPGTPTTQRQSKTPYLDALGTDLTEMAEQGRLDPIIGRQHE 200
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+QIL RRTKNNP LIGEPGVGKTAI EGLAQRI GDVPD+I+GK+V+TLDMG LV
Sbjct: 201 IERVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVQGDVPDSIKGKRVVTLDMGALV 260
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AGTKYRG+FEERLK++++EIK+S ILFIDE HT+IGAG AEG +DAANILKP+L+RGE
Sbjct: 261 AGTKYRGQFEERLKRVIDEIKES-RCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATTLDEYRK+IE+D ALERRFQPV V EPS+++TIQIL+G++ RYE H+L+ +D
Sbjct: 320 LQTIGATTLDEYRKYIERDAALERRFQPVMVDEPSIEDTIQILRGIKSRYEDFHQLQISD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ +AA LS +Y+ DR LPDKAIDLIDEA SRVR+ + P R+ + L + KE+
Sbjct: 380 EAIRAAAVLSARYVPDRQLPDKAIDLIDEAASRVRMYRSATPPRLRDALRGLEALRKERE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG------PVVTEVDI 499
A+ +E A LR+RE + ++I + E E G G P VTE DI
Sbjct: 440 AALEDHQYELAENLREREERMLSRIQEI----------EAELGTRGNERYDRPYVTEEDI 489
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
+V WTG+PV +++ +E+ RL+ MEE LH R++GQ EA+ IS+A+RRAR GLK+P R
Sbjct: 490 AEVVGMWTGVPVTRLTGNETQRLMHMEEFLHSRIVGQHEAIVTISKAVRRARAGLKDPKR 549
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PI SFIF GPTGVGK+ELAKALA + FG+EEA+I++DMSEF ERHT S+L+GSPPGY+GY
Sbjct: 550 PIGSFIFLGPTGVGKTELAKALAEFMFGTEEALIKIDMSEFQERHTTSRLVGSPPGYIGY 609
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLT+AVRR+PY+VVLFDEIEKAHPD FN++LQ+LEDG LTD KGR VDF+NT++IM
Sbjct: 610 GEGGQLTDAVRRKPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIM 669
Query: 680 TSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQ 739
TSNVG+ I + RIGF + E D + R K V E L+ FRPEFLNR+D I+F
Sbjct: 670 TSNVGTEHIRRAS-RIGFGGNAAEIDQADMRRK--VDEALRMLFRPEFLNRIDATIIFHP 726
Query: 740 LTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLL 799
LT E++ I +MLK V +L I+L V E + GY+P++GARPLRR I L+
Sbjct: 727 LTTEEIQSITQLMLKRVQTQLDEHQIKLVVQPDALEYLARRGYDPAFGARPLRRVITNLI 786
Query: 800 EDSMAEKMLAREIKEGDSVIVDVDSD 825
ED +AE +L+ + ++GD+VIVDV D
Sbjct: 787 EDPLAEGLLSGQFQDGDTVIVDVYED 812
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
++ +FT++A +V+ LA EEAR H YIG+EH+LLGL+RE EG+AARVL+ LG R
Sbjct: 4 LYSKFTKRAKQVLQLAAEEARAFNHPYIGTEHILLGLIRESEGIAARVLDELGVKLPQAR 63
Query: 151 TQVIRMV--GEST 161
+ V +V GEST
Sbjct: 64 SAVEFIVGPGEST 76
>gi|422324030|ref|ZP_16405067.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
gi|353344624|gb|EHB88930.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
Length = 855
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/759 (54%), Positives = 566/759 (74%), Gaps = 22/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +L H YIG+EH+LLG++R EGVA +VL LGA+P+ +R V+
Sbjct: 80 FTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRANEGVANQVLVKLGAEPAAVRQAVM 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ S + AGVG G+S P L+++G NLT A EG+LDPV+GR +
Sbjct: 140 DLISGYPGNNSGDKETAGVGAGNSREGTPAGSTILDQFGRNLTAAAREGELDPVIGRHKE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATTLDEYRKHIEKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TD
Sbjct: 320 LQTIGATTLDEYRKHIEKDAALERRFQPIQVEEPSQELAVQILKGVRDKYEAHHRVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ +A L+ +YISDRFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ ++K
Sbjct: 380 EAIETAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKLLDEKAAKLRQQKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
+A+ QD+EKA LRD+E + A+ +E KA E GD VT I +++A
Sbjct: 440 DAINSQDYEKAAGLRDQEQKVLAE-------KEEAEKAWREGGDAFGTVTPEVIAEVLAA 492
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TG+PV K++ +ES RLL ME+ LHKRVIGQ+ A+ A+SRAIRR R GLK+P RP SFI
Sbjct: 493 STGVPVYKITEEESTRLLTMEQELHKRVIGQEHAIAALSRAIRRTRAGLKDPRRPGGSFI 552
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+++I LDMSE+ E+HTVS+L G+PPGYVGY EGGQL
Sbjct: 553 FAGPTGVGKTELAKALAEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQL 612
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS
Sbjct: 613 TEKVRRKPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGS 672
Query: 686 SVIEKGGRRI--GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
+ RRI GF D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++
Sbjct: 673 RDV---NRRIPVGFQA-MDDTAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSES 728
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ +I D+ + + RL +D+ +++T + + +GY+PS GARPLRR + R +ED++
Sbjct: 729 EILQIVDLFVGRLAKRLAEQDMSIELTNAAKVLMAAKGYDPSMGARPLRREMQRNIEDAL 788
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
+EK+L +IK G+ + VDV+ +G+ SS + LA
Sbjct: 789 SEKILFGDIKPGEKITVDVEGEGDSAKFVFSSQPMKELA 827
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEG+ AR LE+LG + +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVR 60
Query: 151 TQVIRMVGESTEA 163
QV +VG +A
Sbjct: 61 EQVQDIVGPGPQA 73
>gi|255326112|ref|ZP_05367199.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
gi|255296823|gb|EET76153.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
Length = 851
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/759 (54%), Positives = 566/759 (74%), Gaps = 22/759 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +L H YIG+EH+LLG++R EGVA +VL LGA+P+ +R V+
Sbjct: 80 FTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRANEGVANQVLVKLGAEPAAVRQAVM 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ S + AGVG G+S P L+++G NLT A EG+LDPV+GR +
Sbjct: 140 DLISGYPGNNSGDKETAGVGAGNSREGTPAGSTILDQFGRNLTAAAREGELDPVIGRHKE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRSRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATTLDEYRKHIEKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TD
Sbjct: 320 LQTIGATTLDEYRKHIEKDAALERRFQPIQVEEPSQELAVQILKGVRDKYEAHHRVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ +A L+ +YISDRFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ ++K
Sbjct: 380 EAIETAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKLLDEKAAKLRQQKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
+A+ QD+EKA LRD+E + A+ +E KA E GD VT I +++A
Sbjct: 440 DAINSQDYEKAAGLRDQEQKVLAE-------KEEAEKAWREGGDAFGTVTPEVISEVLAA 492
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TG+PV K++ +ES RLL ME+ LHKRVIGQ+ A+ A+SRAIRR R GLK+P RP SFI
Sbjct: 493 STGVPVYKITEEESSRLLTMEQELHKRVIGQEHAIAALSRAIRRTRAGLKDPRRPGGSFI 552
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+++I LDMSE+ E+HTVS+L G+PPGYVGY EGGQL
Sbjct: 553 FAGPTGVGKTELAKALAEFLFGDEDSLITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQL 612
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS
Sbjct: 613 TEKVRRKPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGS 672
Query: 686 SVIEKGGRRI--GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
+ RRI GF D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++
Sbjct: 673 RDV---NRRIPVGFQA-MDDTAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSES 728
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ +I D+ + + RL +D+ +++T + + +GY+PS GARPLRR + R +ED++
Sbjct: 729 EILQIVDLFVGRLAKRLAEQDMSIELTNAAKVLMAAKGYDPSMGARPLRREMQRNIEDAL 788
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
+EK+L +IK G+ + VDV+ +G+ SS + LA
Sbjct: 789 SEKILFGDIKPGEKITVDVEGEGDSAKFVFSSQPMKELA 827
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEG+ AR LE+LG + +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVR 60
Query: 151 TQVIRMVGESTEA 163
QV +VG +A
Sbjct: 61 EQVQDIVGPGPQA 73
>gi|400535256|ref|ZP_10798793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
gi|400331614|gb|EJO89110.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
Length = 848
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/730 (57%), Positives = 558/730 (76%), Gaps = 21/730 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L Q + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVGQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLTK E+
Sbjct: 671 SDISKP---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTKDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD+ L++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMINRVATQLKSKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEG 815
K+L E+ G
Sbjct: 788 KILFEEVGPG 797
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|385653550|ref|ZP_10048103.1| ATP-dependent Clp protease, ATP-binding subunit [Leucobacter
chromiiresistens JG 31]
Length = 841
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/745 (56%), Positives = 559/745 (75%), Gaps = 26/745 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQTVI 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ + VGA GG S L+++G NLT+ A EGKLDPV+GR+ ++ERV
Sbjct: 140 QLLSGYQAGKESATVGAPESGGESKGSQ-VLDQFGRNLTQAAREGKLDPVIGREKEVERV 198
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RR+KNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K+V LD+G ++AG++
Sbjct: 199 MQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIIKGEVPETLKDKQVYVLDLGSMIAGSR 258
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAANILKP LARGELQ I
Sbjct: 259 YRGDFEERLKKVTKEIRNRGDIIIFIDEIHTLVGAGAAEGAIDAANILKPMLARGELQTI 318
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKH EKD ALERRFQ ++V EPS+ +I ILKGLR+RYE HHK+ TD A+V
Sbjct: 319 GATTLDEYRKHFEKDAALERRFQSIQVAEPSLPHSINILKGLRDRYEAHHKVSITDGAIV 378
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+A L+ +Y+ DRFLPDKAIDLIDEAG+R+RL P E RE ++++ + EK +A+
Sbjct: 379 AAVNLADRYVQDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDEKIAVVRAEKEQAIE 438
Query: 450 GQDFEKAGELRDREMDLKAQ---ISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
GQDFE A RD E L A+ + G ++AE + G + V+ +
Sbjct: 439 GQDFEAAANKRDEEKKLIAERLRLEKQWRSGNVATQAEVDEGLIAEVLAQA--------- 489
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RL MEE LH+RVIGQ+EA+ A+++ IRR R GLK+P RP SFIF
Sbjct: 490 TGIPVFKLTEEETSRLRFMEEALHQRVIGQNEAISALAKTIRRQRAGLKDPKRPSGSFIF 549
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + F E+A+I LDMSE+ E+HTVS+L G+PPG+VG+ EGGQLT
Sbjct: 550 AGPTGVGKTELAKALAEFLFDDEDALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLT 609
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR +DFKNT++IMT+N+GS+
Sbjct: 610 EKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNLGST 669
Query: 687 VIEKGGRRIGFDLDYDEKDSS--YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I G +GF + E DSS Y+ +K V EELK++F+PEFLNR+D+ IVF QLTK E
Sbjct: 670 AI--AGGPVGFQI---EGDSSVGYDMMKGKVNEELKKHFKPEFLNRVDDTIVFPQLTKPE 724
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+ +K++ DRL +D+ ++++ RER+ E GY+P+ GARPLRRA+ R +ED ++
Sbjct: 725 LLQIVDLFVKQLKDRLLDRDMHIEISTAARERLAEVGYDPTLGARPLRRAMQREIEDRLS 784
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVT 829
E++L+ E+ GD V VD DG T
Sbjct: 785 ERILSAELLAGDLVKVDF-VDGEFT 808
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE L +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALEQLEISLDAVR 60
Query: 151 TQVIRMVG 158
QV ++G
Sbjct: 61 AQVTDIIG 68
>gi|397669226|ref|YP_006510761.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium propionicum F0230a]
gi|395143331|gb|AFN47438.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium propionicum F0230a]
Length = 831
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/735 (56%), Positives = 562/735 (76%), Gaps = 11/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
F+ +A +V+ L+ EA ++ HNYIG+EH+LLGL+REGEGVAA+VL LGAD +R+ VI
Sbjct: 80 FSPRAKRVLELSLREALQMNHNYIGTEHILLGLVREGEGVAAQVLLKLGADLGRVRSTVI 139
Query: 155 RMVG--ESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ + EA AG G + L+++G NLT+ A E +LDPV+GR +IERV+
Sbjct: 140 QLLAGYQGKEASMAGAPEAGPEKSSSQVLDQFGRNLTQAARENRLDPVIGRVSEIERVMT 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ TLD+G LVAG++YR
Sbjct: 200 VLSRRTKNNPVLIGEPGVGKTAVVEGLSQAIVRGDVPETLRDKQIYTLDLGALVAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+++EIK +I+LFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVLKEIKTRGDIMLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKHIEKD ALERRFQP++V EPSV TI ILKGLR+RYE HH++ TDEAL +A
Sbjct: 320 TTLDEYRKHIEKDAALERRFQPIQVAEPSVALTIDILKGLRDRYEAHHRITITDEALTAA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A ++ +YI DRFLPDKAIDLIDEAG+R+R++ P + RE ++++ ++ EK+ A+ Q
Sbjct: 380 ATMADRYIQDRFLPDKAIDLIDEAGARLRIQRMTAPPDLREFDEQIAKLKMEKDAAIDAQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
DFE A LRD ++AQ + +K + + ++ D+ VV E +I ++S+ TGIPV
Sbjct: 440 DFETAARLRDDVTRIQAQRA---EKEEAWKQGDS---DIPAVVGEEEIAVVLSSSTGIPV 493
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ +ES RLL+ME+ L KR IGQ++AVKA++R+IRR R GLK+P RP SFIF+GP+G
Sbjct: 494 FKLTEEESARLLRMEQELGKRYIGQEDAVKALARSIRRTRAGLKDPKRPSGSFIFAGPSG 553
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPGYVGY EGGQLTE VRR
Sbjct: 554 VGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGYVGYEEGGQLTEKVRR 613
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+P++VVLFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT+++MT+N+GS I K
Sbjct: 614 KPFSVVLFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVMTTNLGSRDISK- 672
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
G +GF DE SSY ++K+ V++ELKQ+FRPEFLNR+DE++VF QLT+ +++ I D+
Sbjct: 673 GVNLGFSRAGDEA-SSYEKMKAKVSDELKQHFRPEFLNRVDEIVVFHQLTQSDIERIVDL 731
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M+ ++ RL +D+ +++T + V + G++P GARPLRRA+ R +ED +AEK+L E
Sbjct: 732 MVAQIESRLADRDMGIELTPAAKTLVAKRGFDPVLGARPLRRALQRDIEDVLAEKILFGE 791
Query: 812 IKEGDSVIVDVDSDG 826
+ G V VDV +G
Sbjct: 792 LVAGQIVQVDVAEEG 806
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 56/72 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE +G R
Sbjct: 1 MFERFTDRARRVIVLAQDEAKLLNHNYIGTEHLLLGLIHEGEGVAAKALEQMGISLQAAR 60
Query: 151 TQVIRMVGESTE 162
QV+ ++G+ +
Sbjct: 61 EQVVEIMGQGQQ 72
>gi|88854764|ref|ZP_01129430.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
gi|88815925|gb|EAR25781.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
Length = 825
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/752 (55%), Positives = 563/752 (74%), Gaps = 15/752 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++G + EAV G + L+++G NLT+ A +GKLDPV+GR+ ++ERV+QI
Sbjct: 140 QLLGSFQGKEAVAVGGNDATPDKGSQVLDQFGRNLTQAARDGKLDPVIGREKEMERVMQI 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RR+KNNP LIGEPGVGKTA+ EGLA I GDVP+T++ K++ +LD+G L+AG++YRG
Sbjct: 200 LSRRSKNNPVLIGEPGVGKTAVVEGLAIAIVHGDVPETLKDKQLYSLDLGSLIAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH EKD ALERRFQ V+V EP++ TI ILKGLR++YE HK+ TD A+V+AA
Sbjct: 320 TLDEYRKHFEKDAALERRFQSVQVHEPNLPHTINILKGLRDKYESFHKVSITDGAIVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +Y+SDRFLPDKAIDL+DEAG+R+RL P E RE + ++ ++ +K A+ QD
Sbjct: 380 NLADRYVSDRFLPDKAIDLLDEAGARLRLSILSAPPELREFDDKIAEVRGQKEGAIEDQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP--VVTEVDIQHIVSAWTGIP 510
FEKA LRD E L + L + K +GDVG +V E I +++A TGIP
Sbjct: 440 FEKAASLRDEEKKLLGERLRLEKQWK--------SGDVGASGIVDEGLIAEVLAAATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ +ES RL+ ME+ LH RVIGQ+EA+ +S+ IRR R GLK+PNRP SFIF+GPT
Sbjct: 492 VFKLTEEESSRLIFMEKALHMRVIGQEEAISVLSKTIRRTRAGLKDPNRPSGSFIFAGPT 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELAKALA + F E AMI LDMSE+ E+HTVS+L G+PPG+VG+ EGGQLTE VR
Sbjct: 552 GVGKTELAKALAEFLFDDESAMISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR +DFKNT++IMT+N+G+ I
Sbjct: 612 RKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNLGTKDITA 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G +GF ++ D +SY+R++ V EELK++F+PEFLNR+DE IVF QL+K E+ +I D
Sbjct: 672 G--PMGFQVEGDSA-TSYDRMRGKVVEELKKHFKPEFLNRVDETIVFPQLSKPELLQIVD 728
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+ +K + +R+ +D+ +++T +ER++E G++P+ GARPLRRA+ +ED+++EK+L
Sbjct: 729 LFIKRLSERMMDRDLTVELTVPAKERLIEVGFDPTLGARPLRRAVQHEVEDALSEKILHG 788
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPESLA 842
E+ GD V VD V + G PE A
Sbjct: 789 ELNAGDHVHVDFVDSLFVFTTSRQPGLPEKEA 820
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG ++R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDSVR 60
Query: 151 TQV 153
QV
Sbjct: 61 EQV 63
>gi|300742477|ref|ZP_07072498.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
gi|300381662|gb|EFJ78224.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
Length = 850
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/743 (55%), Positives = 561/743 (75%), Gaps = 21/743 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +L H YIG+EH+LLG++R EGVA +VL +G + +R V+
Sbjct: 80 FTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRASEGVANQVLSKVGVQGAEVRQAVM 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQI 206
++ G + AGVG G+S P L+++G NLT A EG+LDPV+GR ++
Sbjct: 140 DLISGYPGNNENKETAGVGAGNSREGTPAGSTILDQFGRNLTAAAREGQLDPVIGRHHEM 199
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVA
Sbjct: 200 ERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVA 259
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGEL
Sbjct: 260 GSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTLDEYRKHIEKD ALERRFQP++V EPS D +QILKG+R++YE HH++ TDE
Sbjct: 320 QTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSQDLAVQILKGVRDKYEAHHRVTITDE 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
++ +A L+ +YISDRFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ +K +
Sbjct: 380 SIEAAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKILDEKASKLRTQKED 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A++GQD+EKA LRD+E + A+ + E KA E GD VT I ++++
Sbjct: 440 AIKGQDYEKAAALRDQEQKVLAEKA-------EAEKAWRENGDAFGEVTPEVISEVLASS 492
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+PV K++ +ES RL+KME+ LHKRVIGQD A+KA+SRAIRR R GLK+P RP SFIF
Sbjct: 493 TGVPVYKITEEESSRLIKMEDELHKRVIGQDNAIKALSRAIRRTRAGLKDPRRPGGSFIF 552
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLT
Sbjct: 553 AGPTGVGKTELAKALAEFLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQLT 612
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS
Sbjct: 613 EKVRRKPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSR 672
Query: 687 VIEKGGRR--IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ RR +GF D D+ Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E
Sbjct: 673 DV---NRRVPVGFQA-MDHGDADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSENE 728
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+ + + RL +++ +++T+ + + +GY+P+ GARPLRR + R +ED+++
Sbjct: 729 ILQIVDLFVGRLAKRLADQEMSIELTDAAKVLMASKGYDPAMGARPLRREMQRNIEDALS 788
Query: 805 EKMLAREIKEGDSVIVDVDSDGN 827
EK+L EIK G+ + V V+ +G+
Sbjct: 789 EKILFGEIKPGEKITVGVEGEGD 811
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEG+ AR LE+LG + +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVR 60
Query: 151 TQVIRMVGESTEA 163
QV +VG S +A
Sbjct: 61 EQVQSIVGPSPQA 73
>gi|374578908|ref|ZP_09652002.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus youngiae DSM 17734]
gi|374414990|gb|EHQ87425.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus youngiae DSM 17734]
Length = 813
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/737 (58%), Positives = 560/737 (75%), Gaps = 19/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + KV+ LA EEA R NYIG+EHLLLGL+ EGEG+AAR+L NL P + QVI
Sbjct: 79 FTPRVKKVLELANEEAHRQEVNYIGTEHLLLGLIMEGEGIAARILANLNVSPERVWKQVI 138
Query: 155 RMVG--------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+++G + ++ A G P L E+G +LT A EG+LDPV+GR+ +I
Sbjct: 139 KLLGGELDDSAIPTPSSIPASKNAGPVNT--PALNEFGRDLTLQAREGRLDPVIGREKEI 196
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+Q+L RRTKNNP LIGEPGVGKTAIAEGLAQ I + VP+ + K+VITLD+ +VA
Sbjct: 197 ERVIQVLSRRTKNNPALIGEPGVGKTAIAEGLAQGIVNNRVPEILVNKRVITLDLSAMVA 256
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G+KYRGEFEERLKK+MEEI+ IILFIDE+HTLIGAGAAEGAIDAANILKP+LARGEL
Sbjct: 257 GSKYRGEFEERLKKVMEEIRADGNIILFIDELHTLIGAGAAEGAIDAANILKPALARGEL 316
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
QCIGATTL+EYRK+IEKD ALERRFQP+ V EP+V+E I IL GLR+RYE HH+++ TDE
Sbjct: 317 QCIGATTLEEYRKYIEKDTALERRFQPITVGEPTVEEAIGILSGLRDRYEAHHRVKITDE 376
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
A+ +AA+LS +YISDRFLPDKAIDL+DEA SRVRL P + + LE+E ++ KEK
Sbjct: 377 AIEAAARLSDRYISDRFLPDKAIDLMDEAASRVRLTSYTAPPDLKLLEEEAERLKKEKEA 436
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
AV Q+FEKA ++RD+E ++++++ D + E +VT DI IV++W
Sbjct: 437 AVSSQEFEKAAQIRDQEQKVRSELAEQRDVWQNKRYKEN------VMVTGDDIAQIVASW 490
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV+K++ +ES+RLL +E+ LH+R+IGQ++AV A++RA+RRAR GLK+P RPI SFIF
Sbjct: 491 TGIPVKKLAEEESERLLHLEDLLHQRLIGQEDAVTAVARAVRRARAGLKDPKRPIGSFIF 550
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTGVGK+EL ALA FG E+A+IR+DMSE+ME+H VS+L+G+PPGY+G+ EGGQLT
Sbjct: 551 LGPTGVGKTELGLALAEGMFGDEKALIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLT 610
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
EAVRR+PY+VVL DEIEKAHP+ FN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVGSS
Sbjct: 611 EAVRRKPYSVVLLDEIEKAHPEAFNILLQVLEDGRLTDTKGRTVDFRNTVIIMTSNVGSS 670
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
++K +GF DEK + Y ++ V EELK+ FRPEFLNR+DE++VF L +
Sbjct: 671 FLKKEA--MGFAAKKDEK-TDYKNMRGHVMEELKRSFRPEFLNRIDELVVFHSLQAEHLM 727
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
+I++I++++V RL +ELQV + E + +EG +P +GARPLRRAI RL+ED+++EK
Sbjct: 728 KISEILVRQVNKRLIENGLELQVEKSAIELIAKEGNDPIFGARPLRRAIQRLIEDALSEK 787
Query: 807 MLAREIKEGDSVIVDVD 823
+L E K GD V V+ +
Sbjct: 788 ILEGEFKNGDRVRVEAE 804
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
R+TE+A KV+ +A EA+R+GH +G+EH+LLGL++EGEG+AA+ L + D + I +QV
Sbjct: 4 RYTERAQKVLAIAHSEAKRMGHQVVGTEHVLLGLIQEGEGIAAQALIAMNLDLAKIHSQV 63
Query: 154 IRMVG 158
++ G
Sbjct: 64 EQIAG 68
>gi|213691598|ref|YP_002322184.1| ATPase AAA [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM
1222]
gi|384198734|ref|YP_005584477.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|213523059|gb|ACJ51806.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320457686|dbj|BAJ68307.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
Length = 861
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/740 (55%), Positives = 564/740 (76%), Gaps = 16/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV--------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
M+ G+ A GV + + L+++G NLT A EGKLDPV+GR +I
Sbjct: 140 DMIRGNSGTGDGKGELANAGGVADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEI 199
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +VA
Sbjct: 200 ERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSMVA 259
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGEL
Sbjct: 260 GSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGEL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + TD
Sbjct: 320 QTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDG 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K+E
Sbjct: 380 ALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDE 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A++GQDFEKA ELRD++ L+A K KE S E E+ DV VV E I ++S+
Sbjct: 440 AIKGQDFEKAAELRDKQEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVISST 493
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFIF
Sbjct: 494 TGIPVFKLTQAESKKLLSMETELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIF 553
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LT
Sbjct: 554 AGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELT 613
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 EKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTR 673
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +V+
Sbjct: 674 DIAKAA-NTGFNLGAN-NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQVR 731
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
+I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++EK
Sbjct: 732 QIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEK 791
Query: 807 MLAREIKEGDSVIVDVDSDG 826
+L ++++G V+VD + +G
Sbjct: 792 ILMGDLEDGQRVMVDAEGEG 811
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|390936556|ref|YP_006394115.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
gi|389890169|gb|AFL04236.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
Length = 858
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/742 (56%), Positives = 566/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV-GESTEAVGAGVG-----GGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A +G G GG + T L+++G NLT A EGKLDPV+GR
Sbjct: 140 DMIHGNSGGANASGKGDLANAGGVQDKRSQTGSAILDQFGRNLTAEAAEGKLDPVIGRTN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKDKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ ++ EK
Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDQKVAKVAAEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
++A++ QDFEKA ELRD + L+A+ K KE S E E+ DV VV E I ++S
Sbjct: 440 DKAIKDQDFEKAAELRDNQEKLEAE-----RKEKESSWREGES-DVEMVVNEDVIAQVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 494 STTGIPVFKLTQAESKKLLGMESELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +
Sbjct: 674 TRDISKAA-NTGFNLGSN-AESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDIKQLNDRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L E+++G V+VD + +G
Sbjct: 792 EKILMGELEDGQRVVVDSEGEG 813
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|383809434|ref|ZP_09964954.1| ATP-dependent Clp protease ATP-binding subunit family protein
[Rothia aeria F0474]
gi|383447786|gb|EID50763.1| ATP-dependent Clp protease ATP-binding subunit family protein
[Rothia aeria F0474]
Length = 856
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/753 (54%), Positives = 564/753 (74%), Gaps = 25/753 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +L H YIG+EH+LLG++R EGVA +VL LG +P+ +R V+
Sbjct: 80 FTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRANEGVANQVLAKLGVEPAAVRQAVM 139
Query: 155 RMV------GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G+S E AGVG G+S P L+++G NLT A EG+LDPV+GR
Sbjct: 140 DLISGYPGNGDSKET--AGVGAGNSREGTPAGSTILDQFGRNLTAAAREGQLDPVIGRHH 197
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G L
Sbjct: 198 EMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSL 257
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARG
Sbjct: 258 VAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARG 317
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATTLDEYRKHIEKD ALERRFQP++V EPS + +QILKG+R++YE HH++ +
Sbjct: 318 ELQTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSQELAVQILKGVRDKYEAHHRVTIS 377
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEA+ +A L+ +YISDRFLPDKA+DLIDEAG+R+R++ P E + LE++ ++ + K
Sbjct: 378 DEAIETAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKVLEEKAGKLKRAK 437
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+A+R QD+EKA LRD E ++ + + KA E GD VT I +++
Sbjct: 438 EDAIREQDYEKAAGLRDEE-------QKVLQEKDQKEKAWRENGDAFGEVTPEVISEVLA 490
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TG+PV K++ +ES RLLKME+ LHKRVIGQ+ A+KA++R+IRR R GLK+PNRP SF
Sbjct: 491 SSTGVPVYKITEEESSRLLKMEDELHKRVIGQEHAIKALARSIRRTRAGLKDPNRPGGSF 550
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + FG ++A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQ
Sbjct: 551 IFAGPTGVGKTELAKALAEFLFGDQDALITLDMSEYQEKHTVSRLFGAPPGYVGYEEGGQ 610
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G
Sbjct: 611 LTEKVRRKPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLG 670
Query: 685 SSVIEKGGRR--IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
S + RR +GF D+ + Y R+++ V E LK++FRPEFLNR+D++IVF QL++
Sbjct: 671 SRDV---NRRVPVGFQA-MDDNAADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSE 726
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
E+ +I D+ + + RL +D+ +++T + + +GY+P+ GARPLRR + R +ED+
Sbjct: 727 TEILQIVDLFVGRLAKRLADQDMSIELTNAAKVLMASKGYDPAMGARPLRREMQRNIEDA 786
Query: 803 MAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSS 835
++EK+L EIK G+ + VD + +G+ SS
Sbjct: 787 LSEKILFGEIKPGEKITVDAEGEGDDAKFTFSS 819
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEG+AAR LE+LG +++R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLVHEGEGIAARALESLGITLNSVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G A
Sbjct: 61 EQVQDIIGPGANA 73
>gi|19553872|ref|NP_601874.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|62391515|ref|YP_226917.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 13032]
gi|21325450|dbj|BAC00072.1| ATPases with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN)
[Corynebacterium glutamicum ATCC 13032]
gi|385144766|emb|CCH25805.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum K051]
Length = 925
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/759 (55%), Positives = 563/759 (74%), Gaps = 41/759 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMVGESTEAVGAGV-----------------------GGGSSGNKMPTL--EEYGTNLTK 189
+++ G GS G + +L +++G NLT+
Sbjct: 140 QLLSGYEGGQGGSPEGGQGAPTGGDAVGAGAAPGGRPSSGSPGERSTSLVLDQFGRNLTQ 199
Query: 190 LAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPD 249
A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+
Sbjct: 200 AAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPE 259
Query: 250 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 309
T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEG
Sbjct: 260 TLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEG 319
Query: 310 AIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 369
AIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD T++ILK
Sbjct: 320 AIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDLTVEILK 379
Query: 370 GLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 429
GLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+R++ P
Sbjct: 380 GLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARMRIKRMTAPSS 439
Query: 430 ARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--A 487
RE+++ + + +EK A+ QDFEKA LRD+E L G+E S+ E + +
Sbjct: 440 LREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEERSEKEKQWRS 489
Query: 488 GDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISR 545
GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+IGQDEAVKA+SR
Sbjct: 490 GDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEEELHKRIIGQDEAVKAVSR 549
Query: 546 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 605
AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF +R T
Sbjct: 550 AIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDSLIQIDMGEFHDRFT 609
Query: 606 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 665
S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD
Sbjct: 610 ASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDG 669
Query: 666 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFR 724
+GR VDFKNT+LI TSN+G++ I K +GF + + D+ Y+R+K+ V +ELK++FR
Sbjct: 670 QGRIVDFKNTVLIFTSNLGTADISK-AVGLGFSGSSETDSDAQYDRMKNKVHDELKKHFR 728
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNR+DE++VF QLTK ++ ++ D+++ V + L KD+ +++TE+ ++ + G++P
Sbjct: 729 PEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEKDMSIELTEKAKDLLANRGFDP 788
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 789 VLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 QEVEEIIGQGSQ 72
>gi|310287202|ref|YP_003938460.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|311064064|ref|YP_003970789.1| genetic competence regulator ClpC [Bifidobacterium bifidum PRL2010]
gi|421734040|ref|ZP_16173129.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|421737399|ref|ZP_16176009.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
gi|309251138|gb|ADO52886.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|310866383|gb|ADP35752.1| ClpC Negative regulator of genetic competence [Bifidobacterium
bifidum PRL2010]
gi|407078036|gb|EKE50853.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|407295316|gb|EKF15088.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
Length = 858
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/742 (56%), Positives = 566/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV-GESTEAVGAGVG-----GGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A +G G GG + T L+++G NLT A EGKLDPV+GR
Sbjct: 140 DMIHGNSGGANASGKGDLANAGGVQDKRSQTGSAILDQFGRNLTAEAAEGKLDPVIGRTN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKDKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ ++ EK
Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDQKVAKVAAEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
++A++ QDFEKA ELRD + L+A+ K KE S E E+ DV VV E I ++S
Sbjct: 440 DKAIKDQDFEKAAELRDNQEKLEAE-----RKEKESSWREGES-DVEMVVNEDVIAQVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 494 STTGIPVFKLTQAESKKLLGMESELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGSN-AESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDIKQLNDRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L E+++G V+VD + +G
Sbjct: 792 EKILMGELEDGQRVVVDSEGEG 813
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|425457129|ref|ZP_18836835.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
gi|389801614|emb|CCI19250.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
Length = 795
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/766 (55%), Positives = 549/766 (71%), Gaps = 60/766 (7%)
Query: 75 SRR---GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREG 131
SRR G +GR G+ + FT KA K+ A +EAR+LG I EHLLL + +
Sbjct: 59 SRRVIEGMTGRGTGY--SPVNIPFTPKAKKMFEQAFQEARQLGEQAIAPEHLLLAITTDP 116
Query: 132 EGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSG----NKMP---TLEEYG 184
E +AA++L G D +R +++ GE V +G S P L +Y
Sbjct: 117 ESLAAKILIMQGVDLIKLRGLLLKNAGEK---VASGRFTAKSDYEDQKNAPQGGILAQYS 173
Query: 185 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 244
NL++ + GK+DPV+GR+P+IERV+QILGRR KNNP L+G PGVGKTAIAEGLAQRI +
Sbjct: 174 RNLSQEVKNGKIDPVIGREPEIERVIQILGRRGKNNPILLGAPGVGKTAIAEGLAQRIYN 233
Query: 245 GDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 304
D+P+ + K+VI LDMG L+AGT++RG+FEERLK ++EE+++S IILFIDE+HTL+GA
Sbjct: 234 SDIPELLRDKQVIALDMGSLLAGTRFRGDFEERLKGVVEEVRKSGNIILFIDEIHTLVGA 293
Query: 305 GAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 364
G+ GA+DA+N+LKP+LARGELQC+GATTLDEY++HIE+D ALERRFQPV V EP+ ++
Sbjct: 294 GSMGGAMDASNLLKPALARGELQCLGATTLDEYKQHIERDAALERRFQPVMVGEPTKEQA 353
Query: 365 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHA 424
I+IL+GL+ YE H+++Y +A+ +A LS +YI+DRFLPDKAIDL+DEAGSR LR++
Sbjct: 354 IEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYS 413
Query: 425 QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 484
+ E+ +E I E +L+
Sbjct: 414 LQSKSPAEVSEESPLINPE----------------------------SLI---------- 435
Query: 485 TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAIS 544
PVV +I IV+AWTGIPV +++ ES+ LL +E LH+R+IGQ EAV A+S
Sbjct: 436 -------PVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLEYQLHERIIGQQEAVNAVS 488
Query: 545 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 604
RAIRRARV LKNPNRPIASFIF+GPTGVGK+EL KALA FGSE +MIRLDMSEFME H
Sbjct: 489 RAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESH 548
Query: 605 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 664
TVSKLIG+PPGY+GY EGGQLTEAVRR+PY VVLFDEIEKAHPDVFN++LQ+LEDGRLTD
Sbjct: 549 TVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTD 608
Query: 665 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFR 724
S+GR VDFKNTL+IMTSN+GS VIEKGG +GF++ D S Y +I + VT+ELKQYFR
Sbjct: 609 SQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTDELKQYFR 668
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNRLDE+IVFRQLT+ EV +IADI++ ++ +L K I ++VT F++ V+ EGY+P
Sbjct: 669 PEFLNRLDEIIVFRQLTREEVTQIADILIADIAKQLTEKGISVEVTAAFKDLVINEGYDP 728
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
SYGARPLRRA+ R LEDS+AE ML+ ++ GD ++DV ++ VTV
Sbjct: 729 SYGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTV 774
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE F +KAIK +M AQEEARR GH+ +G+EHLLLGL+ E AA +L++L R
Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATAAAALILKDLKVTLHESR 60
Query: 151 TQVIRMVGEST 161
+ M G T
Sbjct: 61 RVIEGMTGRGT 71
>gi|400975586|ref|ZP_10802817.1| ATP-dependent Clp protease, ATP-binding subunit [Salinibacterium
sp. PAMC 21357]
Length = 825
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/749 (55%), Positives = 563/749 (75%), Gaps = 15/749 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++G + EAV G + L+++G NLT+ A +GKLDPV+GR+ ++ERV+QI
Sbjct: 140 QLLGSFQGKEAVAVGGNDATPDKGSQVLDQFGRNLTQAARDGKLDPVIGREKEMERVMQI 199
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RR+KNNP LIGEPGVGKTA+ EGLA I +GDVP+T++ K++ +LD+G L+AG++YRG
Sbjct: 200 LSRRSKNNPVLIGEPGVGKTAVVEGLAIAIVNGDVPETLKDKQLYSLDLGSLIAGSRYRG 259
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+ +EI+ +II+FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 260 DFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGAT 319
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH EKD ALERRFQ V+V EP++ TI ILKGLR+RYE HK+ TD A+V+AA
Sbjct: 320 TLDEYRKHFEKDAALERRFQSVQVHEPNLPHTINILKGLRDRYESFHKVSITDGAIVAAA 379
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
L+ +Y++DRFLPDKAIDL+DEAG+R+RL P E RE + ++ ++ +K A+ QD
Sbjct: 380 NLADRYVADRFLPDKAIDLLDEAGARLRLSILSAPPELREFDDKIAEVRGQKEGAIEDQD 439
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP--VVTEVDIQHIVSAWTGIP 510
FEKA LRD E L + L + K +GDVG +V E I +++A TGIP
Sbjct: 440 FEKAASLRDEEKKLLGERLRLEKQWK--------SGDVGASGIVDEGLIAEVLAAATGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K++ +ES RL+ ME+ LH RVIGQ+EAV +S+ IRR R GLK+PNRP SFIF+GPT
Sbjct: 492 VFKLTEEESSRLIFMEKALHMRVIGQEEAVSVLSKTIRRTRAGLKDPNRPSGSFIFAGPT 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELAKALA + F E A+I LDMSE+ E+HTVS+L G+PPG+VG+ EGGQLTE VR
Sbjct: 552 GVGKTELAKALAEFLFDDENALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEKVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR +DFKNT++IMT+N+G+ I
Sbjct: 612 RKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNLGTKDITA 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
G +GF ++ D +SY+R++ V EELK++F+PEFLNR+DE IVF QL K E+ +I D
Sbjct: 672 G--PMGFQVEGDSA-TSYDRMRGKVVEELKKHFKPEFLNRVDETIVFPQLNKPELLQIVD 728
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
+ +K + +R+ +D+ +++T +ER+++ G++P+ GARPLRRA+ +ED+++EK+L
Sbjct: 729 LFIKRLSERMMDRDLTVEITVPAKERLIDVGFDPALGARPLRRAVQHEVEDALSEKILHG 788
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPE 839
E+ GD V VD + V + G PE
Sbjct: 789 ELNAGDHVHVDFIDNKFVFTTSRQPGLPE 817
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG ++R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDSVR 60
Query: 151 TQV 153
QV
Sbjct: 61 EQV 63
>gi|11467441|ref|NP_043587.1| Clp protease ATP binding subunit [Odontella sinensis]
gi|1352089|sp|P49574.1|CLPC_ODOSI RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|1185136|emb|CAA91619.1| caseinolytic-like Clp protease [Odontella sinensis]
Length = 885
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/768 (53%), Positives = 563/768 (73%), Gaps = 41/768 (5%)
Query: 81 GRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLE 140
GR GFV + FT +A +V+ +A E + LG N++G+EH+LL L+ E +GVA R L+
Sbjct: 68 GRGTGFVASEI--PFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALISESDGVAMRTLD 125
Query: 141 NLGADPSNIRTQVIRMVGESTEAVGAGVGGG--------SSGNKMPTLEEYGTNLTKLAE 192
LG + +R ++ + E+ E + + G+ PTL+EY N++K A
Sbjct: 126 KLGVNIPKLRNLILMYIEENQEEILRPLTQAEKFLLEREKKGSSTPTLDEYSENISKEAV 185
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GKLDPV+GR +I V+++L RR KNNP LIGEPGVGKTA+AEGLAQ I + PD ++
Sbjct: 186 DGKLDPVIGRDKEIHEVIKVLARRRKNNPVLIGEPGVGKTAVAEGLAQLIIAEKAPDFLD 245
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
G ++ LD+G ++AGTKYRGEFEER+K+++EE++ IIL IDE+HTL+GAGAAEGA+D
Sbjct: 246 GNLLMALDLGSILAGTKYRGEFEERIKRIVEEVQNDSAIILVIDEIHTLVGAGAAEGAVD 305
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARG+ +CIGATT+DEYRK+IE+DPALERRFQPV V EP+V TI+IL GLR
Sbjct: 306 AANILKPALARGKFRCIGATTIDEYRKYIERDPALERRFQPVHVKEPTVGVTIEILLGLR 365
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
++E HH L Y D+A+ AA L+ ++I+DRFLPDKAID++DEAGSRVRL + +LP +
Sbjct: 366 SKFEEHHTLSYHDKAVEQAAILADKFIADRFLPDKAIDVLDEAGSRVRLENRRLPRGMKR 425
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQI-----SALVDKGKEMSKAETEA 487
L KEL+ ++K E+++ DF+ A +L D EM+++ I S L ++ +++ E +
Sbjct: 426 LLKELQDTLRDKEESIKEHDFDIAKQLVDHEMEVRTHIRIMKQSILTNETLGLARKEIDT 485
Query: 488 GDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAI 547
V E D+ +++ WTGIPV K+S ES RLL MEETLH+R+IGQ A+ ++S+AI
Sbjct: 486 ------VLEGDVAEVIAGWTGIPVNKISDSESKRLLTMEETLHERLIGQHHAIVSVSKAI 539
Query: 548 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 607
RRARVGL+NP+RPIASFIF+GPTGVGK+EL KAL+ Y FG+E++MIRLDMSE+ME+HTV+
Sbjct: 540 RRARVGLRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGNEDSMIRLDMSEYMEKHTVA 599
Query: 608 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 667
KLIGSPPGYVGY EGGQLTEAV+ +PY+VVL DE+EKAHPDVFN++LQIL+DGRLTDSKG
Sbjct: 600 KLIGSPPGYVGYNEGGQLTEAVQTKPYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKG 659
Query: 668 RTVDFKNTLLIMTSNVGSSVIEKGG--------RRIGFDLDYDE-----------KDSS- 707
RT+DF+NT++IMT+N+G+ +IEK + F +D KDS+
Sbjct: 660 RTIDFRNTMIIMTTNLGAKIIEKESGIKPKTKQDKPAFRIDESGCLGWEPTPEPIKDSAL 719
Query: 708 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 767
+ ++ LV EELK++FRPEFLNR+DE+IVF LTK ++ EI +M+K++ RL+ K++ L
Sbjct: 720 FEKVTELVNEELKEFFRPEFLNRIDEIIVFNHLTKYDIWEICGLMVKQLQKRLEEKELTL 779
Query: 768 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEG 815
+V R + EEGY+P YGARPLRRA+MRLLED++A++ L++ + G
Sbjct: 780 EVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCLSKPLYPG 827
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFE+FTE AIKVIML+QEEARR+GHN++G+E LLLG++ + G+ AR L+ R
Sbjct: 1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGIIGQRHGIGARALKKQKVTLKKAR 60
Query: 151 TQVIRMVGESTEAVGAGV 168
++ +G T V + +
Sbjct: 61 REIELYIGRGTGFVASEI 78
>gi|313139902|ref|ZP_07802095.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
gi|313132412|gb|EFR50029.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
Length = 867
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/742 (56%), Positives = 566/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 89 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 148
Query: 155 RMV-GESTEAVGAGVG-----GGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A +G G GG + T L+++G NLT A EGKLDPV+GR
Sbjct: 149 DMIHGNSGGANASGKGDLANAGGVQDKRSQTGSAILDQFGRNLTAEAAEGKLDPVIGRTN 208
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +
Sbjct: 209 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKDKQVYSLDLGSM 268
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 269 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 328
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 329 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 388
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ ++ EK
Sbjct: 389 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDQKVAKVAAEK 448
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
++A++ QDFEKA ELRD + L+A+ K KE S E E+ DV VV E I ++S
Sbjct: 449 DKAIKDQDFEKAAELRDNQEKLEAE-----RKEKESSWREGES-DVEMVVNEDVIAQVIS 502
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 503 STTGIPVFKLTQAESKKLLGMESELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSF 562
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 563 IFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 622
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 623 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 682
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +
Sbjct: 683 TRDIAKAA-NTGFNLGSN-AESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQ 740
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 741 VRQIVDLDIKQLNDRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 800
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L E+++G V+VD + +G
Sbjct: 801 EKILMGELEDGQRVVVDSEGEG 822
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
+MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G +
Sbjct: 9 SMFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDT 68
Query: 150 RTQVIRMVGESTEA 163
R QV M+G+ A
Sbjct: 69 RKQVEEMIGKGNAA 82
>gi|340359190|ref|ZP_08681685.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
gi|339885200|gb|EGQ74938.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
Length = 853
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/762 (55%), Positives = 570/762 (74%), Gaps = 26/762 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGLLREGEGVAA+VL LGAD S +R V+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLLREGEGVAAQVLTKLGADLSTVRQTVM 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+M+ E+ A G+G G SG+ + L+++G NLT A EGKLDPV+GR ++ERV
Sbjct: 140 QMLSGYEGKETVTAGGSGKEGVPSGSAI--LDQFGRNLTAAAREGKLDPVIGRHKEMERV 197
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNP LIGEPGVGKTA+ EGL+Q + GDVP+T+ K++ +LDMG LVAG++
Sbjct: 198 MQILSRRTKNNPVLIGEPGVGKTAVVEGLSQAVVHGDVPETLRDKQLYSLDMGSLVAGSR 257
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+++E++ +I+LFIDE+HTL+GAGAAEGA+DAA+ILKP LARGELQ I
Sbjct: 258 YRGDFEERLKKVLKEVRTRGDIVLFIDEIHTLVGAGAAEGAVDAASILKPMLARGELQTI 317
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTL+EYRK IEKD ALERRFQPV V +PS++ETI IL GLR+RYE H++ TDEA+
Sbjct: 318 GATTLEEYRK-IEKDAALERRFQPVTVDQPSIEETIGILNGLRDRYEAFHRVVITDEAIE 376
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA+L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P E RE++ + ++ +EK A+
Sbjct: 377 AAAKLADRYINDRFLPDKAIDLIDEAGARLRIRRMTAPPELREIDDRIAEVKREKESAID 436
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFE+A LRD E L + +E + + GD+ V EVD + +++
Sbjct: 437 DQDFERAAALRDDERRLAEE--------RENKEEAWKTGDLDQV-AEVDESLVAEVLAMS 487
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ ES +LL ME LHKR+IGQD+A++A+S++IRR R GLK+P RP SFIF
Sbjct: 488 TGIPVVKITEAESAKLLNMEAELHKRIIGQDKAIQALSKSIRRTRAGLKDPKRPGGSFIF 547
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + F E+++++LDMSEF E+HTVS+L G+PPGYVGY EGGQLT
Sbjct: 548 AGPTGVGKTELAKALAEFLFDDEDSLVQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQLT 607
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDE+EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS
Sbjct: 608 EKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGHLSDAQGREVDFKNTVIIMTTNLGSK 667
Query: 687 VIEKGGRRIGFDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I G+ + E + Y +K+ V ELKQ FRPEFLNR+D++IVF QLTK EV
Sbjct: 668 DI---GKSVATGFQSTEGGTMDYEEMKAHVNRELKQQFRPEFLNRVDDLIVFPQLTKDEV 724
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+M+ ++ RL +++ + +T+ +E + E G++P GARPLRRAI R +ED+++E
Sbjct: 725 RQIVDLMITQLDRRLVDQEMTIVLTDAAKELLAERGFDPVLGARPLRRAIQRDIEDALSE 784
Query: 806 KMLAREIKEGDSVIVDVDSDGNVT--VLNGSSGAPESLADPL 845
K+L EI+ G V+VD + +G + +G P +DPL
Sbjct: 785 KILFGEIERGQKVVVDAEGEGILGEFTFHGEPWDPRVGSDPL 826
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE++ +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDISLDAVR 60
Query: 151 TQVIRMVGESTEA 163
QV+ ++GE A
Sbjct: 61 GQVVEIIGEGQSA 73
>gi|384201060|ref|YP_005586807.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
gi|338754067|gb|AEI97056.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
Length = 871
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/742 (55%), Positives = 564/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV-GESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A GV + + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DMIRGNSGTGTGDGKGDLANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K
Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++GQDFEKA ELRD++ L+A K KE S E E+ DV VV E I ++S
Sbjct: 440 DEAIKGQDFEKAAELRDKQEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 494 STTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGAN-NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L ++++G VIVD + +G
Sbjct: 792 EKILMGDLEDGQRVIVDAEGEG 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|409356843|ref|ZP_11235230.1| ATPases with chaperone activity, ATP-binding subunit [Dietzia
alimentaria 72]
Length = 884
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/762 (56%), Positives = 575/762 (75%), Gaps = 21/762 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+++ G+ EA GA G G + P+ L+++G NLT+ A EGKLDPVVGR ++
Sbjct: 140 QLLSGYQGKEAEATGAPAGAGGRESGTPSSSTVLDQFGRNLTQAAMEGKLDPVVGRAKEV 199
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I + +VP+T++ K++ +LD+G LVA
Sbjct: 200 ERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNNEVPETLKDKQLYSLDLGSLVA 259
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGEL
Sbjct: 260 GSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGEL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTLDEYRKHIEKD ALERRFQPV+VPEP V+ +I+ILKGLR+RYE HH++ TD
Sbjct: 320 QTIGATTLDEYRKHIEKDAALERRFQPVQVPEPGVELSIEILKGLRDRYEAHHRVTITDA 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
AL +AAQL+ +YI+DRFLPDKAIDLIDEAG+R+R++ P + RE ++++ + +EK
Sbjct: 380 ALAAAAQLADRYINDRFLPDKAIDLIDEAGARMRIKRMTAPPDLREFDEKIAEARREKES 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A+ QDFEKA LRD E L A+ S ++ K+ + DV VV E I ++ W
Sbjct: 440 AIDAQDFEKAAGLRDTEKKLIAERS---EREKQWRAGDM---DVAAVVDEEQIAEVLGNW 493
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +E+ RLL+MEE L KR+IGQDEA+KA+SRAIRR R GLK+P RP SFIF
Sbjct: 494 TGIPVFKLTEEETTRLLRMEEELSKRIIGQDEAIKAVSRAIRRTRAGLKDPKRPSGSFIF 553
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQLT
Sbjct: 554 AGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLT 613
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+LI TSN+G+
Sbjct: 614 EKVRRKPFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFKNTVLIFTSNLGTR 673
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K +GF D + +Y R+K V +ELK++FRPEFLNR+DE++VF QLT+ ++
Sbjct: 674 DISK-AVGMGFQ-SSDNTEDAYERMKQKVNDELKKHFRPEFLNRIDEIVVFHQLTQEQIV 731
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
++ D+M+ V LK KD+ ++VT+R ++ + + G++P GARPLRR I R +ED+++EK
Sbjct: 732 QMVDLMVSRVGVALKAKDMTIEVTDRAKQLLAKRGFDPVLGARPLRRTIQREIEDTLSEK 791
Query: 807 MLAREIKEGDSVIVDV-----DSDGNVTVLNGSSGAPESLAD 843
+L E+ G+ V VDV +SD SGAP D
Sbjct: 792 ILFGEVAAGELVSVDVEGWDGESDKTENAKFTFSGAPRPDGD 833
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|354612690|ref|ZP_09030634.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
gi|353222993|gb|EHB87286.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
Length = 850
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/736 (56%), Positives = 571/736 (77%), Gaps = 19/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+++ G+ GAG G G+ + + L+++G NLT A EG LDPV+GR +IERV+
Sbjct: 140 QLLSGYQGKEPAEAGAGRGEGTPSSSL-VLDQFGRNLTAAAREGNLDPVIGRNSEIERVM 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP +IGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG++Y
Sbjct: 199 QVLSRRTKNNPVMIGEPGVGKTAVVEGLAQNIVKGEVPETLKEKQLYTLDLGSLVAGSRY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 259 RGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQP++V EPS++ TI+ILKGLR+RYE HH++ TD ALV+
Sbjct: 319 ATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRISITDSALVA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +YI+DR+LPDKAIDLIDEAG+R+R+R P + RE ++++ + ++K A+
Sbjct: 379 AASLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADVRRDKESAIDA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L Q S + K+ GD+ VV EVD I +++ WT
Sbjct: 439 QDFERAARLRDEEKTLLGQKSEREKQWKD--------GDL-DVVAEVDDEQIAEVLAHWT 489
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV +++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 490 GIPVFRLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFA 549
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL+KALA + FG ++A+I++DM EF +R+T S+L G+PPGYVGY EGGQLTE
Sbjct: 550 GPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTE 609
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 610 KVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTQD 669
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF DE ++ Y+++K V EE+K++FRPEFLNR+D++IVF QLT+ ++ E
Sbjct: 670 ISK-SVSLGFTSGSDE-ETRYDKMKQKVNEEMKKHFRPEFLNRIDDVIVFHQLTRDQIIE 727
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
+ D+M V ++LK +D+ L++T++ + + + G++P GARPLRR I R +ED ++EK+
Sbjct: 728 MVDLMTSRVEEQLKGRDMALELTDKAKALLAKRGFDPVLGARPLRRTIQREVEDQLSEKI 787
Query: 808 LAREIKEGDSVIVDVD 823
L E++ G +IVDV+
Sbjct: 788 LFGEVQPGQIIIVDVE 803
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60
Query: 151 TQVIRMVGESTEA 163
QV ++G+ +A
Sbjct: 61 QQVEEIIGQGQQA 73
>gi|311112373|ref|YP_003983595.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
gi|310943867|gb|ADP40161.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
Length = 850
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/743 (55%), Positives = 561/743 (75%), Gaps = 21/743 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +L H YIG+EH+LLG++R EGVA +VL +G + +R V+
Sbjct: 80 FTPRAKKVLELSMREAIQLNHGYIGTEHILLGMVRASEGVANQVLSKVGVQGAEVRQAVM 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQI 206
++ G + AGVG G+S P L+++G NLT A EG+LDPV+GR ++
Sbjct: 140 DLISGYPGNNENKETAGVGAGNSREGTPAGSTILDQFGRNLTAAAREGQLDPVIGRHHEM 199
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K + TLD+G LVA
Sbjct: 200 ERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKHLYTLDLGSLVA 259
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGEL
Sbjct: 260 GSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 319
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATTLDEYRKHIEKD ALERRFQP++V EPS + +QILKG+R++YE HH++ TDE
Sbjct: 320 QTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSQELAVQILKGVRDKYEAHHRVTITDE 379
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
++ +A L+ +YISDRFLPDKA+DLIDEAG+R+R++ P E + L+++ ++ +K +
Sbjct: 380 SIEAAVNLAARYISDRFLPDKAVDLIDEAGARLRIKRMTAPPEIKILDEKASKLRTQKED 439
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A++GQD+EKA LRD+E + A+ + E KA E GD VT I ++++
Sbjct: 440 AIKGQDYEKAAALRDQEQKVLAEKA-------EAEKAWRENGDAFGEVTPEVISEVLASS 492
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+PV K++ +ES RL+KME+ LHKRVIGQD A+KA+SRAIRR R GLK+P RP SFIF
Sbjct: 493 TGVPVYKITEEESSRLIKMEDELHKRVIGQDNAIKALSRAIRRTRAGLKDPRRPGGSFIF 552
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + FG E+A+I LDMSE+ E+HTVS+L G+PPGYVGY EGGQLT
Sbjct: 553 AGPTGVGKTELAKALAEFLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYDEGGQLT 612
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+GS
Sbjct: 613 EKVRRKPFSVVLFDEVEKAHTDLFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGSR 672
Query: 687 VIEKGGRR--IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ RR +GF D D+ Y R+++ V E LK++FRPEFLNR+D++IVF QL++ E
Sbjct: 673 DV---NRRVPVGFQA-MDHGDADYERMQARVMENLKEHFRPEFLNRVDDIIVFPQLSENE 728
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I D+ + + RL +++ +++T+ + + +GY+P+ GARPLRR + R +ED+++
Sbjct: 729 ILQIVDLFVGRLAKRLADQEMSIELTDAAKVLMASKGYDPAMGARPLRREMQRNIEDALS 788
Query: 805 EKMLAREIKEGDSVIVDVDSDGN 827
EK+L EIK G+ + V V+ +G+
Sbjct: 789 EKILFGEIKPGEKITVGVEGEGD 811
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EHLLLGL+ EGEG+ AR LE+LG + +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVR 60
Query: 151 TQVIRMVGESTEA 163
QV +VG S +A
Sbjct: 61 EQVQSIVGPSPQA 73
>gi|229821882|ref|YP_002883408.1| ATPase AAA-2 domain-containing protein [Beutenbergia cavernae DSM
12333]
gi|229567795|gb|ACQ81646.1| ATPase AAA-2 domain protein [Beutenbergia cavernae DSM 12333]
Length = 843
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/763 (57%), Positives = 572/763 (74%), Gaps = 28/763 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QV+
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLGKLGADLNRVRQQVL 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
++V G+ A G G SG+ + L+++G NLT+ A EGKLDPV+GR+ + ERV+
Sbjct: 140 QLVQGYQGKEPVAAGGPTEGQPSGSAV--LDQFGRNLTQAAREGKLDPVIGRETETERVM 197
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG++Y
Sbjct: 198 QVLSRRTKNNPVLVGEPGVGKTAVVEGLAQDIVRGDVPETLKDKQLYTLDLGALVAGSRY 257
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IG
Sbjct: 258 RGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIG 317
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK++EKDPALERRFQP+ V EPS+ I ILKG+R+RYE HH++ TD ALV+
Sbjct: 318 ATTLDEYRKYVEKDPALERRFQPITVNEPSLTHAIDILKGVRDRYEAHHRVSITDAALVA 377
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
AA L+ +Y++DR+LPDKAIDLIDEAG+R+R+R P E REL+ ++ + + K A+
Sbjct: 378 AATLADRYVNDRYLPDKAIDLIDEAGARLRIRRMTAPPELRELDDQIAETRRSKESAIDD 437
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWT 507
QDFE+A LRD E L + +D+ K + +A V EVD I +++A T
Sbjct: 438 QDFERAARLRDEEKQL---TNRRLDREKAWKSGDLDA------VAEVDEELIAEVLAAST 488
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL+ME+ LHKR++GQ+ AVKA+S+AIRR R GLK+P RP SFIF+
Sbjct: 489 GIPVFKLTEEESSRLLRMEDELHKRIVGQEAAVKALSQAIRRTRAGLKDPKRPGGSFIFA 548
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ LA+ LA + FG E+A+I+LDMSEF E+HTVS+L GSPPGYVGY EGGQLTE
Sbjct: 549 GPTGVGKTLLARTLAEFLFGDEDALIQLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTE 608
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRRRP++VVLFDE+EKAH D+FN +LQILEDGRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 609 KVRRRPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRD 668
Query: 688 IEKG---GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I KG G + G DL +SY R+K+ V +ELKQ+FRPEFLNR+D++IVF L++ E
Sbjct: 669 IAKGLQTGFQAGGDL-----STSYERMKAKVNDELKQHFRPEFLNRVDDVIVFPTLSQEE 723
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ I D + +V RL KD+ +++T + + E+GY+P GARPLRRAI R +ED ++
Sbjct: 724 IFAIVDFEIAKVDKRLADKDMAIEITPAAKALLAEKGYDPVLGARPLRRAIQREIEDQLS 783
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPV 847
EK+L E+K G V VD +G + G+P S AD PV
Sbjct: 784 EKILFGELKAGQKVTVDAVGEGLLGEFT-FVGSPRS-ADAEPV 824
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDIVR 60
Query: 151 TQVIRMVGESTEA 163
QVI ++GE +A
Sbjct: 61 QQVIEIIGEGQQA 73
>gi|355676751|ref|ZP_09060247.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
gi|354813340|gb|EHE97951.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
Length = 850
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/749 (55%), Positives = 561/749 (74%), Gaps = 13/749 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +VI + EA R IG+EH+L+ +LREG+ VA+R+L +G + ++
Sbjct: 81 YTPRARRVIENSYREAVRFKAAQIGTEHILIAILREGDCVASRLLNTIGVSIQKLYIDLL 140
Query: 155 RMVGESTEAVG---AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+GE AV +G GG N PTL+ Y NLT+LA +G+LDPV+GR+ +I+RV+Q
Sbjct: 141 AAMGEDAPAVKDDISGAKGGRKSNATPTLDSYSRNLTQLAADGRLDPVIGREQEIQRVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNPCLIGEPGVGKTA+ EGLAQ I SG+VP+TI K+V+TLD+ +VAG+KYR
Sbjct: 201 ILSRRTKNNPCLIGEPGVGKTAVVEGLAQMIVSGNVPETIADKRVMTLDLSGMVAGSKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK++ E+ S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGELQ IGA
Sbjct: 261 GEFEERIKKVISEVIDSGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGELQLIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT++EYRK+IEKD ALERRFQPV V EP+ DE++ IL+GLR RYE HHK+ TDEAL +A
Sbjct: 321 TTINEYRKYIEKDSALERRFQPVTVDEPTEDESVAILRGLRSRYEEHHKVEITDEALAAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YI+DRFLPDKAIDLIDEA SRVRL + P + +E E+E+ + + K EA++ +
Sbjct: 381 VKLSSRYINDRFLPDKAIDLIDEASSRVRLANYTKPSKIKEYEEEIEALEESKEEAIKKE 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+EKAGE++ ++ L+ +I+ + M K + E +V++ +I +VS WT IPV
Sbjct: 441 AYEKAGEIKSKQEKLREKIN------QTMEKWQKEKETKKLLVSDNEIADVVSGWTRIPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ +ES+RL +E LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTG
Sbjct: 495 RKLAEEESERLKNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPGRPIGSFLFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KAL+ FG+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR
Sbjct: 555 VGKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY+V+LFDEIEKAHPDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I
Sbjct: 615 NPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-IS 673
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+R+GF D K + Y +K V +E+K+ F+PEFLNR+DE+IVF QL+K +K IADI
Sbjct: 674 PKRLGFGAASDAK-ADYTFMKERVMDEVKRLFKPEFLNRIDEIIVFHQLSKDHIKGIADI 732
Query: 752 MLKEVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
ML + R K + IEL VT+ RE ++++GY+ YGARPLRR I L+ED MAE+ML
Sbjct: 733 MLSTIGKRSKDQLGIELTVTDEAREYLIDKGYDEKYGARPLRRTIQNLVEDKMAEEMLDG 792
Query: 811 EIKEGDSVIVDVDSDGNVTVLNGSSGAPE 839
IK GD+V V D + +T + S AP+
Sbjct: 793 SIKAGDTVQVGFDGE-KLTFTSKSKAAPK 820
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M ER+T++A + + LA A L H Y+G+EHLL+GLL+EG GVAA+VLE+ G + +
Sbjct: 1 MMERYTQQAQEALGLAVGVAESLNHGYVGTEHLLIGLLQEGTGVAAKVLEDNGVEEDRVI 60
Query: 151 TQVIRMVG 158
V +++
Sbjct: 61 ELVSQLIA 68
>gi|429731906|ref|ZP_19266529.1| ATPase family protein [Corynebacterium durum F0235]
gi|429144702|gb|EKX87811.1| ATPase family protein [Corynebacterium durum F0235]
Length = 871
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/759 (55%), Positives = 567/759 (74%), Gaps = 41/759 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GES-----------TEAVGAGV--GG------GSSGNKMPTLEEYGTNLTKL 190
+++ GE ++AVGAG GG G N + L+++G NLT+
Sbjct: 140 QLLSGYEGGEGGTPEAPQQSSGSDAVGAGASPGGRVQSSVGERSNSL-VLDQFGRNLTQA 198
Query: 191 AEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDT 250
A +GKLDPVVGR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T
Sbjct: 199 ARDGKLDPVVGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPET 258
Query: 251 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 310
++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGA
Sbjct: 259 LKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGA 318
Query: 311 IDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKG 370
IDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ TI ILKG
Sbjct: 319 IDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELTIDILKG 378
Query: 371 LRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 430
LR+RYE HH++ TD AL +AA LS +YI+DR+LPDKA+DLIDEAG+R+R++ P
Sbjct: 379 LRDRYEAHHRVSITDGALAAAANLSDRYINDRYLPDKAVDLIDEAGARMRIKRMTAPAGL 438
Query: 431 RELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AG 488
RE+++ + + +EK A+ QDFEKA LRD+E L G+E S+ E + AG
Sbjct: 439 REVDERIAAVRREKEAAIDAQDFEKAAGLRDQERRL----------GEERSEKEKQWRAG 488
Query: 489 DVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRA 546
D+ + V E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRA
Sbjct: 489 DLEEIAEVGEEQIAEVLGTWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRA 548
Query: 547 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 606
IRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T
Sbjct: 549 IRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKALAEFLFGEDDALIQIDMGEFHDRFTA 608
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +
Sbjct: 609 SRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQ 668
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRP 725
GR VDFKNT+LI TSN+G+ I K +GF + + + Y R+K V +ELK++FRP
Sbjct: 669 GRVVDFKNTVLIFTSNLGTQDISK-AVGMGFSSVGETDAEGQYERMKQKVNDELKKHFRP 727
Query: 726 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPS 785
EFLNR+D+++VF QLT+ E+ ++ D+++ V LK KD++L++T+ ++ + + G++P
Sbjct: 728 EFLNRIDDIVVFHQLTQEEIIKMVDLLVGRVSKALKAKDMDLELTDNAKKLLAKRGFDPV 787
Query: 786 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 824
GARPLRR I R +ED ++EK+L E+ G+ + VDVD+
Sbjct: 788 LGARPLRRTIQREIEDVLSEKILFGEVGAGEIITVDVDN 826
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 56/72 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR HNYIG+EH+LLGL++EGE VAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSFNHNYIGTEHILLGLIQEGECVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G ++
Sbjct: 61 QEVEEIIGRGSQ 72
>gi|23464638|ref|NP_695241.1| protease [Bifidobacterium longum NCC2705]
gi|23325195|gb|AAN23877.1| protease [Bifidobacterium longum NCC2705]
Length = 869
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/742 (55%), Positives = 564/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV-GESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A GV + + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DMIRGNSGTGTGDGKGDLANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K
Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++GQDFEKA ELRD++ L+A K KE S E E+ DV VV E I ++S
Sbjct: 440 DEAIKGQDFEKAAELRDKQEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 494 STTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGAN-NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L ++++G VIVD + +G
Sbjct: 792 EKILMGDLEDGQRVIVDAEGEG 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|23336357|ref|ZP_00121578.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum DJO10A]
gi|189438873|ref|YP_001953954.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|227546736|ref|ZP_03976785.1| ATP-dependent protease, ATPase subunit [Bifidobacterium longum
subsp. longum ATCC 55813]
gi|239620712|ref|ZP_04663743.1| ClpC [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|317481706|ref|ZP_07940738.1| ATPase [Bifidobacterium sp. 12_1_47BFAA]
gi|322689668|ref|YP_004209402.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|322691629|ref|YP_004221199.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|419847456|ref|ZP_14370628.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 1-6B]
gi|419850517|ref|ZP_14373505.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 35B]
gi|419852605|ref|ZP_14375472.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 2-2B]
gi|419855456|ref|ZP_14378213.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 44B]
gi|189427308|gb|ACD97456.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|227212698|gb|EEI80579.1| ATP-dependent protease, ATPase subunit [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239516288|gb|EEQ56155.1| ClpC [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|291516227|emb|CBK69843.1| ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum subsp. longum F8]
gi|316916820|gb|EFV38210.1| ATPase [Bifidobacterium sp. 12_1_47BFAA]
gi|320456485|dbj|BAJ67107.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|320461004|dbj|BAJ71624.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|386408907|gb|EIJ23792.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 35B]
gi|386410285|gb|EIJ25079.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 2-2B]
gi|386411010|gb|EIJ25774.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 1-6B]
gi|386415546|gb|EIJ30075.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 44B]
Length = 869
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/742 (55%), Positives = 564/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV-GESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A GV + + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DMIRGNSGTGTGDGKGDLANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K
Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++GQDFEKA ELRD++ L+A K KE S E E+ DV VV E I ++S
Sbjct: 440 DEAIKGQDFEKAAELRDKQEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 494 STTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGAN-NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L ++++G VIVD + +G
Sbjct: 792 EKILMGDLEDGQRVIVDAEGEG 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|312132327|ref|YP_003999666.1| clpa1 [Bifidobacterium longum subsp. longum BBMN68]
gi|311773667|gb|ADQ03155.1| ClpA1 [Bifidobacterium longum subsp. longum BBMN68]
Length = 869
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/742 (55%), Positives = 564/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV-GESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A GV + + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DMIRGNSGTGTGDGKGDLANAGGVTDKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K
Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++GQDFEKA ELRD++ L+A K KE S E E+ DV VV E I ++S
Sbjct: 440 DEAIKGQDFEKAAELRDKQEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 494 STTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGAN-NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L ++++G VIVD + +G
Sbjct: 792 EKILMGDLEDGQRVIVDAEGEG 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|296454596|ref|YP_003661739.1| ATPase domain-containing protein [Bifidobacterium longum subsp.
longum JDM301]
gi|296184027|gb|ADH00909.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 881
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/742 (55%), Positives = 564/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ + EA +LGH+YIG+EH+LLGL+REGEGV +VL + D +R+ I
Sbjct: 80 FTPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATI 139
Query: 155 RMV-GESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
M+ G S A GV + + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DMIRGNSGTGTGDGKGDLANAGGVTDKQNKSGSAILDQFGRNLTVEAAEGKLDPVIGRTN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL++++ +I +K
Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++GQDFEKA ELRD++ L+A K KE S E E+ DV VV E I ++S
Sbjct: 440 DEAIKGQDFEKAAELRDKQEKLEAD-----RKQKEDSWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SF
Sbjct: 494 STTGIPVFKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGAN-NESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L ++++G VIVD + +G
Sbjct: 792 EKILMGDLEDGQRVIVDAEGEG 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGNAA 73
>gi|392418483|ref|YP_006455088.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
gi|390618259|gb|AFM19409.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
Length = 847
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/739 (57%), Positives = 569/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G+G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGSGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILKGLRDRYEAHHRVSITDGAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++L+ KD+ +++T+R + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IKMVDLMIGRVGNQLRAKDMTMELTDRAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDV++
Sbjct: 788 KILFEEVGPGQLVTVDVEN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|296118950|ref|ZP_06837523.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
gi|295968048|gb|EFG81300.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
Length = 905
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/753 (54%), Positives = 563/753 (74%), Gaps = 33/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLTKLGADLPRVRQQVI 139
Query: 155 RMV-------GESTEAVGAGVGGGSSGNKMP--------------TLEEYGTNLTKLAEE 193
+++ G+ EA VG G+ L+++G NLT+ A++
Sbjct: 140 QLLSGYEGNQGDKPEAGSGPVGAGTGQQNPGRQGPGGQGERSNSLVLDQFGRNLTQAAKD 199
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 200 GKLDPVVGRESEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 259
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 260 KQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 319
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+V EPS+++TI IL+GLR+
Sbjct: 320 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVDEPSMEDTITILRGLRD 379
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
+YE HH++ YTD+AL +AA LS +YI+DRFLPDKA+DL+DEAG+R+R+R P+ RE+
Sbjct: 380 KYEAHHRVSYTDDALKAAASLSDRYINDRFLPDKAVDLLDEAGARMRIRRMTAPKGIREV 439
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + + KEK A+ QDFEKA LRD E L + S + + +GD+ +
Sbjct: 440 DDRIADVRKEKEAAIDAQDFEKAAGLRDTERKLHEERST--------KEKQWRSGDLEEI 491
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
+TE I +++ WTGIPV K++ ES RLL MEE LHKR+IGQ+EAVKA+SRAIRR R
Sbjct: 492 AEITEDQIAEVLAHWTGIPVLKLTEKESSRLLNMEEELHKRIIGQNEAVKAVSRAIRRTR 551
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FGS++ +I++DM EF +R T S+L G
Sbjct: 552 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGSDDDLIQIDMGEFHDRFTASRLFG 611
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 612 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 671
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF D + D+ Y+R+K+ V +ELK++FRPEFLNR
Sbjct: 672 FKNTVLIFTSNLGTQDISK-AVGLGFTSNDEADSDAQYDRMKNKVNDELKKHFRPEFLNR 730
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ E+ ++ ++++ V +L +D+ +++T++ ++ + + G++P GARP
Sbjct: 731 IDEIVVFHQLTRDEIVQMVELLIGRVETQLAERDMGIELTQKAKDLLAKRGFDPVLGARP 790
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED ++EK+L EI G+ + VDV+
Sbjct: 791 LRRTIQREIEDQLSEKILYGEIGAGEIISVDVE 823
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL++EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIQEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G T+
Sbjct: 61 GEVEAIIGHGTQ 72
>gi|269798082|ref|YP_003311982.1| ATPase AAA [Veillonella parvula DSM 2008]
gi|269094711|gb|ACZ24702.1| ATPase AAA-2 domain protein [Veillonella parvula DSM 2008]
Length = 815
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/826 (51%), Positives = 584/826 (70%), Gaps = 41/826 (4%)
Query: 35 MMSYMQPSASRISSFSGLRRSNALDTFTCDFHSTVAVSLSSRRGKSGRAG------GFVV 88
MM A R+ S L + AL+ D+ T V + + K+G A G V
Sbjct: 1 MMQRFTDDAQRVLS---LAQEAALE-LGHDYVGTEHVLIGLTKVKNGVAAKALEELGLVT 56
Query: 89 KAMFE-------RFTEKAIKVIM---------LAQEEARRLGHNYIGSEHLLLGLLREGE 132
+ +FE R +KA + M LA + A + HNY+G+EH+LLGLL +G
Sbjct: 57 EDIFEAVEEHVGRGNKKATSIYMTPRVKHVLELAIQVANHMNHNYVGTEHILLGLLSDGS 116
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
GVA +L + +++ + ++G + + G G +S N + L ++ T+L + A+
Sbjct: 117 GVAVAILRAMNIRSNDVVEAIRSILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAK 176
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ +
Sbjct: 177 QGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILR 236
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++I+L +G ++AG KYRGEFEERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+D
Sbjct: 237 NKRIISLSIGSMLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMD 296
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARGE Q IGATTLDEY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR
Sbjct: 297 AANILKPALARGEFQVIGATTLDEYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLR 356
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HK + TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR++ + +
Sbjct: 357 DRYEAFHKAKITDEALTAAVSLSSRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKA 416
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
LE L + KEK AV QDFEKA +LRD E L +I DK K ++K E D
Sbjct: 417 LEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQSLVKEIG---DK-KSIAK---EKSDQKL 469
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
+VTE DI +V+ WTGIPV K++ +ES LL +EE LHKRV+GQDEAV A+++A+RRAR
Sbjct: 470 IVTEEDIAAVVAQWTGIPVAKIAEEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARA 529
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+
Sbjct: 530 GLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGA 589
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF
Sbjct: 590 PPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDF 649
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGF------DLDYDE-KDSSYNRIKSLVTEELKQYFRP 725
+NT++IMTSN+G+ + K +GF D + DE K + K V + +K+YFRP
Sbjct: 650 RNTVIIMTSNLGAKALHKNSPELGFLAAKKADSNVDENKGIDFKEAKKSVMDAVKRYFRP 709
Query: 726 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPS 785
EFLNR+DEMIVF LT+ ++KEI I++ +V RL+ +D++L+++ + +V+EG + +
Sbjct: 710 EFLNRIDEMIVFHPLTEEDLKEIVTILMSDVTKRLEERDLQLEISPEAMKLLVKEGSDFT 769
Query: 786 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNVTV 830
GARPL+RAI RL+ED +++ +L + KEG + D D+D V++
Sbjct: 770 MGARPLKRAIQRLIEDPVSDLILKGDAKEGKIIKADAKDNDLVVSI 815
>gi|376257826|ref|YP_005145717.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
gi|372120343|gb|AEX84077.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
Length = 878
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/778 (54%), Positives = 571/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTEAVGAGVGGGSS---------------GNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G+ N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNEGEAVGAGTGVGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+ ++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMCIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +GD+
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGDLED 488
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRAIRR
Sbjct: 489 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRT 548
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 549 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 608
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 609 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 668
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 669 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLN 727
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 728 RIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 787
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 788 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|170780568|ref|YP_001708900.1| Clp family ATP-binding protease [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155136|emb|CAQ00236.1| putative Clp-family ATP-binding protease [Clavibacter michiganensis
subsp. sepedonicus]
Length = 836
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/737 (56%), Positives = 554/737 (75%), Gaps = 18/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT-LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ + EAV G S T L+++G NLT+ A +GKLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKEAVAVGGEAQQSQQAGSTVLDQFGRNLTQAARDGKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RR+KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G L+AG++YR
Sbjct: 200 ILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKGDVPETLKDKQLYTLDLGSLIAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+ +EI+ +II FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH EKD ALERRFQP++V EPS+ TI ILKGLR+RYE HK+ TD A+VSA
Sbjct: 320 TTLDEYRKHFEKDAALERRFQPIQVQEPSLPHTINILKGLRDRYEAFHKVSITDGAIVSA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YI+DRFLPDKAIDLIDEAG+R+RL P E RE ++ + + K A+ Q
Sbjct: 380 ANLADRYIADRFLPDKAIDLIDEAGARLRLSILSAPPELREFDERISTVRVAKETAIEDQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD E +L + L + + +GDV EVD I +++ TG
Sbjct: 440 DFEKAASLRDEEKNLLGERLRL--------EKQWRSGDV-RTTAEVDEGLIAEVLAQATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RL+ ME+ LH+RVIGQ+EA+ A+S+ IRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLVFMEKALHQRVIGQEEAISALSKTIRRTRAGLKDPRRPSGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELAKALA + F E+A+I LDMSE+ E+HTVS+L G+PPG+VG+ EGGQLTE
Sbjct: 551 PTGVGKTELAKALAEFLFDDEDALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNLGTKDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
G +GF ++ + + SY R+K V+EELK+ F+PEFLNR+D+ IVF QL+K E+ +I
Sbjct: 671 T--GAPVGFQVENNAAN-SYERMKGKVSEELKKNFKPEFLNRVDDTIVFPQLSKPELLQI 727
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ +K + DR+ +D+ + + +ER++E G++PS GARPLRRA+ +ED ++E++L
Sbjct: 728 VDLFVKRLSDRMMDRDLTITLETAAKERLIEVGFDPSLGARPLRRAVQHEIEDRLSERIL 787
Query: 809 AREIKEGDSVIVDVDSD 825
E+ GD V VD D
Sbjct: 788 QGELNAGDHVHVDYVDD 804
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQV 153
QV
Sbjct: 61 EQV 63
>gi|148272036|ref|YP_001221597.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829966|emb|CAN00893.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 836
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/744 (56%), Positives = 557/744 (74%), Gaps = 19/744 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT-LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+++ + EAV G S T L+++G NLT+ A +GKLDPV+GR+ +IERV+Q
Sbjct: 140 QLLSGYQGKEAVAVGGEAQQSQQAGSTVLDQFGRNLTQAARDGKLDPVIGREKEIERVMQ 199
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RR+KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G L+AG++YR
Sbjct: 200 ILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKGDVPETLKDKQLYTLDLGSLIAGSRYR 259
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK+ +EI+ +II FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGA
Sbjct: 260 GDFEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGA 319
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEYRKH EKD ALERRFQP++V EPS+ TI ILKGLR+RYE HK+ TD A+VSA
Sbjct: 320 TTLDEYRKHFEKDAALERRFQPIQVQEPSLPHTINILKGLRDRYEAFHKVSITDGAIVSA 379
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
A L+ +YI+DRFLPDKAIDLIDEAG+R+RL P E RE ++ + + K A+ Q
Sbjct: 380 ANLADRYIADRFLPDKAIDLIDEAGARLRLSILSAPPELREFDERISTVRVAKETAIEDQ 439
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTG 508
DFEKA LRD E +L + L + + +GDV EVD I +++ TG
Sbjct: 440 DFEKAASLRDEEKNLLGERLRL--------EKQWRSGDV-RTTAEVDEGLIAEVLAQATG 490
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV K++ +ES RL+ ME+ LH+RVIGQ+EA+ A+S+ IRR R GLK+P RP SFIF+G
Sbjct: 491 IPVFKLTEEESSRLVFMEKALHQRVIGQEEAISALSKTIRRTRAGLKDPRRPSGSFIFAG 550
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELAKALA + F E+A+I LDMSE+ E+HTVS+L G+PPG+VG+ EGGQLTE
Sbjct: 551 PTGVGKTELAKALAEFLFDDEDALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEK 610
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR VDFKNT++IMT+N+G+ I
Sbjct: 611 VRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNLGTKDI 670
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
G +GF ++ + + SY R+K V+EELK+ F+PEFLNR+D+ IVF QL+K E+ +I
Sbjct: 671 T--GAPVGFQVENNAAN-SYERMKGKVSEELKKNFKPEFLNRVDDTIVFPQLSKPELLQI 727
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
D+ +K + DR+ +D+ + + +ER++E G++PS GARPLRRA+ +ED ++E++L
Sbjct: 728 VDLFVKRLSDRMMDRDLTITLETAAKERLIEVGFDPSLGARPLRRAVQHEIEDRLSERIL 787
Query: 809 AREIKEGDSVIVDVDSDGNVTVLN 832
E+ GD V VD DG T +
Sbjct: 788 QGELNAGDHVHVDY-VDGQFTFVT 810
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQV 153
QV
Sbjct: 61 EQV 63
>gi|227876310|ref|ZP_03994423.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269976114|ref|ZP_06183113.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307701521|ref|ZP_07638539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
gi|227843083|gb|EEJ53279.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269935707|gb|EEZ92242.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307613313|gb|EFN92564.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
Length = 915
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/740 (57%), Positives = 565/740 (76%), Gaps = 19/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGHNYIG+EH+LLGLLREG+GVA++VL NLGAD + +R VI
Sbjct: 80 FTPRARKVLEYSMREALQLGHNYIGTEHILLGLLREGDGVASQVLVNLGADLNTVRQTVI 139
Query: 155 RMVG--ESTEAVGA-----GVGGGSS----GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ 203
++ + A G+ GVGGG + G L+++G NLT+ A+E KLDPV+GR
Sbjct: 140 ELLSGFQGGNAPGSDRDVVGVGGGRADNPRGGNSALLDQFGRNLTQAAQENKLDPVIGRT 199
Query: 204 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 263
++ERV+QIL RRTKNNP L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG
Sbjct: 200 KEMERVMQILSRRTKNNPVLVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMGS 259
Query: 264 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 323
LVAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LAR
Sbjct: 260 LVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPILAR 319
Query: 324 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 383
GELQ IGATTL+EYRK+IEKD ALERRFQPV+V EPSV+ET+ ILKGLR+RYE HH++
Sbjct: 320 GELQTIGATTLEEYRKYIEKDSALERRFQPVRVEEPSVEETVAILKGLRDRYESHHRVMI 379
Query: 384 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 443
TD A+ SAAQL+ +YISDRFLPDKAIDLIDEAG+R+R++ P E +E+++++ + +
Sbjct: 380 TDAAVASAAQLADRYISDRFLPDKAIDLIDEAGARLRIQRMTAPPELKEVDEKIAKTRRA 439
Query: 444 KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIV 503
K A+ QDFEKA LRD E L ++ + +K ++ E + VV I ++
Sbjct: 440 KEAAIDAQDFEKAASLRDEEKKLASERA---EKEEQWRSGEDK---TKLVVDAEQIAEVL 493
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
+ TGIPV K++ ES +LL+ME+ LHKR+IGQ+EAVKA+S++IRR R GLK+P RP S
Sbjct: 494 AMATGIPVFKLTQAESSKLLRMEDELHKRIIGQNEAVKAVSQSIRRTRAGLKDPKRPGGS 553
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF+GPTGVGK+ELAKALA + FG E A+I+LDMSEF E+HT S+L GSPPGYVGY EGG
Sbjct: 554 FIFAGPTGVGKTELAKALAEFLFGDENALIQLDMSEFSEKHTASRLFGSPPGYVGYDEGG 613
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
QLTE VRR+P++VVLFDE+EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IMT+N+
Sbjct: 614 QLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 673
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ I K G GF E + Y R+K V EELKQ+FRPEFLNR+DE++VF QL K
Sbjct: 674 GTRDINK-GVLTGFQAS-GELATDYQRMKGKVQEELKQHFRPEFLNRVDEVVVFPQLQKE 731
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ +I D+M+K++ DR+ + + +++T R + +G++ + GARPLRRA+ R +ED +
Sbjct: 732 EILKIVDLMIKKLDDRMLEQGMAIKLTPEARALLAYKGFDKTLGARPLRRAVQREIEDVL 791
Query: 804 AEKMLAREIKEGDSVIVDVD 823
+EK+L E+ EG +V+ DVD
Sbjct: 792 SEKILFNELHEGQTVLADVD 811
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 56/69 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EARRL NYIG+EHLLLGL+ EG+G+AAR LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVR 60
Query: 151 TQVIRMVGE 159
QVI ++GE
Sbjct: 61 AQVIEIIGE 69
>gi|294793817|ref|ZP_06758954.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
3_1_44]
gi|294455387|gb|EFG23759.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
3_1_44]
Length = 815
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/826 (51%), Positives = 583/826 (70%), Gaps = 41/826 (4%)
Query: 35 MMSYMQPSASRISSFSGLRRSNALDTFTCDFHSTVAVSLSSRRGKSGRAG------GFVV 88
MM A R+ S L + AL+ D+ T V + + K+G A G V
Sbjct: 1 MMQRFTDDAQRVLS---LAQEAALE-LGHDYVGTEHVLIGLTKVKNGVAAKALEELGLVT 56
Query: 89 KAMFE-------RFTEKAIKVIM---------LAQEEARRLGHNYIGSEHLLLGLLREGE 132
+ +FE R +KA + M LA + A + HNY+G+EH+LLGLL +G
Sbjct: 57 EDIFEAVEEHVGRGNKKATSIYMTPRVKHVLELAIQVANHMNHNYVGTEHILLGLLSDGS 116
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
GVA +L + +++ + ++G + + G G +S N + L ++ T+L + A+
Sbjct: 117 GVAVAILRAMNIRSNDVVEAIRSILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAK 176
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ +
Sbjct: 177 QGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILR 236
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++I+L +G ++AG KYRGEFEERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+D
Sbjct: 237 NKRIISLSIGSMLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMD 296
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARGE Q IGATTLDEY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR
Sbjct: 297 AANILKPALARGEFQVIGATTLDEYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLR 356
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HK + TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR++ + +
Sbjct: 357 DRYEAFHKAKITDEALTAAVSLSSRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKA 416
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
LE L + KEK AV QDFEKA +LRD E L +I DK K ++K E D
Sbjct: 417 LEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQSLLKEIG---DK-KSIAK---EKSDQKL 469
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
+VTE DI +V+ WTGIPV K++ +ES LL +EE LHKRV+GQDEAV A+++A+RRAR
Sbjct: 470 IVTEEDIAAVVAQWTGIPVAKIAEEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARA 529
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+
Sbjct: 530 GLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGA 589
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF
Sbjct: 590 PPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDF 649
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGF------DLDYDE-KDSSYNRIKSLVTEELKQYFRP 725
+NT++IMTSN+G+ + K +GF D + DE K+ + K V + +K++FRP
Sbjct: 650 RNTVIIMTSNLGAKALHKNSPELGFLAAKKSDFNVDENKEIEFKEAKKSVMDAVKRHFRP 709
Query: 726 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPS 785
EFLNR+DEMIVF LT ++KEI I++ +V RL +D++L++T + +V+EG + +
Sbjct: 710 EFLNRIDEMIVFHPLTGEDLKEIVTILMSDVTKRLGERDLQLEITPEAMKLLVKEGSDFT 769
Query: 786 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNVTV 830
GARPL+RAI RL+ED +++ +L + KEG + D D+D V++
Sbjct: 770 MGARPLKRAIQRLIEDPVSDLILKGDAKEGKIIKADAKDNDLVVSI 815
>gi|418246284|ref|ZP_12872681.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
gi|354509829|gb|EHE82761.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
Length = 925
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/762 (55%), Positives = 561/762 (73%), Gaps = 47/762 (6%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT----------------------------LEEYGTN 186
+++ G G PT L+++G N
Sbjct: 140 QLLSGYEGGQGGSP---EGGQGAPTGGDAVGAGAAPGGRPSSGGPGERSTSLVLDQFGRN 196
Query: 187 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 246
LT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G
Sbjct: 197 LTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGK 256
Query: 247 VPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 306
VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGA
Sbjct: 257 VPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGA 316
Query: 307 AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 366
AEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD T++
Sbjct: 317 AEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDLTVE 376
Query: 367 ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 426
ILKGLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+R++
Sbjct: 377 ILKGLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARMRIKRMTA 436
Query: 427 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 486
P RE+++ + + +EK A+ QDFEKA LRD+E L G+E S+ E +
Sbjct: 437 PSSLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEERSEKEKQ 486
Query: 487 --AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 542
+GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+IGQDEAVKA
Sbjct: 487 WRSGDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEEELHKRIIGQDEAVKA 546
Query: 543 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 602
+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF +
Sbjct: 547 VSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDSLIQIDMGEFHD 606
Query: 603 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 662
R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRL
Sbjct: 607 RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRL 666
Query: 663 TDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQ 721
TD +GR VDFKNT+LI TSN+G+S I K +GF + + D+ Y+R+K+ V +ELK+
Sbjct: 667 TDGQGRIVDFKNTVLIFTSNLGTSDISK-AVGLGFSGSSETDSDAQYDRMKNKVHDELKK 725
Query: 722 YFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEG 781
+FRPEFLNR+DE++VF QLTK ++ ++ D+++ V + L KD+ +++TE+ ++ + G
Sbjct: 726 HFRPEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEKDMSIELTEKAKDLLASRG 785
Query: 782 YNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
++P GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 786 FDPVLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 QEVEEIIGQGSQ 72
>gi|306817201|ref|ZP_07450948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
gi|304650003|gb|EFM47281.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
Length = 915
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/740 (57%), Positives = 565/740 (76%), Gaps = 19/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ + EA +LGHNYIG+EH+LLGLLREG+GVA++VL NLGAD + +R VI
Sbjct: 80 FTPRARKVLEYSMREALQLGHNYIGTEHILLGLLREGDGVASQVLVNLGADLNTVRQTVI 139
Query: 155 RMVG--ESTEAVGA-----GVGGGSS----GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ 203
++ + A G+ GVGGG + G L+++G NLT+ A+E KLDPV+GR
Sbjct: 140 ELLSGFQGGNAPGSDRDVVGVGGGRADNPRGGNSALLDQFGRNLTQAAQENKLDPVIGRT 199
Query: 204 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 263
++ERV+QIL RRTKNNP L+GEPGVGKTA+ EGLAQ I GDVP+T++ K++ +LDMG
Sbjct: 200 KEMERVMQILSRRTKNNPVLVGEPGVGKTAVVEGLAQSIVRGDVPETLKDKQLYSLDMGS 259
Query: 264 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 323
LVAG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LAR
Sbjct: 260 LVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPILAR 319
Query: 324 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 383
GELQ IGATTL+EYRK+IEKD ALERRFQPV+V EPSV+ET+ ILKGLR+RYE HH++
Sbjct: 320 GELQTIGATTLEEYRKYIEKDSALERRFQPVRVEEPSVEETVAILKGLRDRYESHHRVMI 379
Query: 384 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 443
TD A+ SAAQL+ +YISDRFLPDKAIDLIDEAG+R+R++ P E +E+++++ + +
Sbjct: 380 TDAAVASAAQLADRYISDRFLPDKAIDLIDEAGARLRIQRMTAPPELKEVDEKIAKTRRA 439
Query: 444 KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIV 503
K A+ QDFEKA LRD E L ++ + +K ++ E + VV I ++
Sbjct: 440 KEAAIDAQDFEKAASLRDEEKKLASERA---EKEEQWRSGEDK---TKLVVDAEQIAEVL 493
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
+ TGIPV K++ ES +LL+ME+ LHKR+IGQ+EAVKA+S++IRR R GLK+P RP S
Sbjct: 494 AMATGIPVFKLTQAESSKLLRMEDELHKRIIGQNEAVKAVSQSIRRTRAGLKDPKRPGGS 553
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF+GPTGVGK+ELAKALA + FG E A+I+LDMSEF E+HT S+L GSPPGYVGY EGG
Sbjct: 554 FIFAGPTGVGKTELAKALAEFLFGDENALIQLDMSEFSEKHTASRLFGSPPGYVGYDEGG 613
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
QLTE VRR+P++VVLFDE+EKAHPD+FN +LQ+LE+G LTDS+GR VDFKNT++IMT+N+
Sbjct: 614 QLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 673
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ I K G GF E + Y R+K V EELKQ+FRPEFLNR+DE++VF QL K
Sbjct: 674 GTRDINK-GVLTGFQAS-GELATDYQRMKGKVQEELKQHFRPEFLNRVDEVVVFPQLQKE 731
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+ +I D+M+K++ DR+ + + +++T R + +G++ + GARPLRRA+ R +ED +
Sbjct: 732 EILKIVDLMIKKLDDRMLEQGMAIKLTPEARALLAYKGFDKTLGARPLRRAVQREIEDVL 791
Query: 804 AEKMLAREIKEGDSVIVDVD 823
+EK+L E+ EG +V+ DVD
Sbjct: 792 SEKILFNELHEGQTVLADVD 811
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 56/69 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EARRL NYIG+EHLLLGL+ EG+G+AAR LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVR 60
Query: 151 TQVIRMVGE 159
QVI ++GE
Sbjct: 61 AQVIEIIGE 69
>gi|376252008|ref|YP_005138889.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC03]
gi|372113512|gb|AEX79571.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC03]
Length = 878
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/778 (54%), Positives = 573/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNDGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +GD+
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGDLED 488
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRAIRR
Sbjct: 489 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRT 548
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 549 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 608
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 609 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 668
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 669 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVSEHDADGQYDRMKQKVNDELKKHFRPEFLN 727
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 728 RIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 787
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 788 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|296166661|ref|ZP_06849087.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897996|gb|EFG77576.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 844
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/739 (57%), Positives = 564/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ +D AL
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSISDAAL 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLTK E+
Sbjct: 671 SDISKP---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTKDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V ++LK KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMITRVGNQLKAKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQIVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|336324767|ref|YP_004604733.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336100749|gb|AEI08569.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 903
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/754 (55%), Positives = 569/754 (75%), Gaps = 35/754 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA +LGH YIG+EHLLLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 95 FTPRAKKVLELALREALQLGHKYIGTEHLLLGLIREGEGVAAQVLVKLGADLARVRQQVI 154
Query: 155 RMVG----------ESTEAVGAGVG---GGSSGNKMP------TLEEYGTNLTKLAEEGK 195
+++ E AGVG G SG+K+ L+++G NLT+ A++GK
Sbjct: 155 QLLSGYEGNEGAEDSDGEPAAAGVGSNSGAPSGSKIGQKSNSLVLDQFGRNLTQAAKDGK 214
Query: 196 LDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKK 255
LDPVVGR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K+
Sbjct: 215 LDPVVGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGRVPETLKDKQ 274
Query: 256 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 315
+ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+
Sbjct: 275 LYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAAS 334
Query: 316 ILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERY 375
ILKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+RY
Sbjct: 335 ILKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDLTIEILKGLRDRY 394
Query: 376 EIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK 435
E HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+R++ P+ +E+++
Sbjct: 395 EAHHRVSITDGALAAAAQLADRYITDRFLPDKAVDLIDEAGARMRIKRMTAPKSIQEVDE 454
Query: 436 ELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV-- 493
++ + +K A+ QDFEKA LRD E L + +E + AG++ V
Sbjct: 455 KIAAVRTKKEAAIDEQDFEKAAALRDDERKLTEE--------REEKEKAWRAGELDEVAE 506
Query: 494 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVG 553
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R G
Sbjct: 507 VGEEQIAEVMGTWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTRAG 566
Query: 554 LKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 613
LK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A++++DM EF ++ T S+L G+P
Sbjct: 567 LKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGEDDALVQIDMGEFHDKFTASRLFGAP 626
Query: 614 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 673
PGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFK
Sbjct: 627 PGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTDGQGRMVDFK 686
Query: 674 NTLLIMTSNVGSSVIEKGGRRIGFDLDY---DEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
NT+LI TSN+G+ I K +G D++ + Y R+K V +ELK++FRPEFLNR
Sbjct: 687 NTVLIFTSNLGTRDISKA---VGMGFSSGGEDDEATQYARMKDKVHDELKKHFRPEFLNR 743
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+D+++VF QLTK ++ ++ D++L+ V + L+ KD+ L++TE+ + + + G++P GARP
Sbjct: 744 IDDIVVFHQLTKDQIVQMVDLLLRRVTNALEQKDMGLELTEQAKNLLAKRGFDPVLGARP 803
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 824
LRR I R +ED ++EK+L EI G+ V VDV++
Sbjct: 804 LRRTIQREIEDQLSEKILFGEIGAGEIVTVDVEN 837
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 56/68 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+E R L HNYIG+EH+LLGL++EGEGVAA+ LE++G +R
Sbjct: 16 MFERFTDRARRVVVLAQDEGRALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVR 75
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 76 TEVKEIIG 83
>gi|183601796|ref|ZP_02963166.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683673|ref|YP_002470056.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|241190706|ref|YP_002968100.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196112|ref|YP_002969667.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|384193703|ref|YP_005579449.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|384195264|ref|YP_005581009.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|386866851|ref|YP_006279845.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|387820575|ref|YP_006300618.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|387822251|ref|YP_006302200.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679232|ref|ZP_17654108.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|61679297|gb|AAX52926.1| ClpC [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|183219402|gb|EDT90043.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219621323|gb|ACL29480.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|240249098|gb|ACS46038.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250666|gb|ACS47605.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|295793695|gb|ADG33230.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|345282562|gb|AEN76416.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041343|gb|EHN17838.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|385700934|gb|AFI62882.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|386653276|gb|AFJ16406.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|386654859|gb|AFJ17988.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
Length = 850
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/741 (55%), Positives = 564/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D S++R+ I
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLSDLRSTTI 139
Query: 155 RMV--------GESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
M+ G+ + AG V S + L+++G NLT A++GKLDPV+GR +
Sbjct: 140 DMIRGNSGNGEGDKGDMANAGSVQDKRSQSGSAILDQFGRNLTAEAKDGKLDPVIGRSTE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +V
Sbjct: 200 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGDVPETLKDKQVYSLDLGSMV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH + TD
Sbjct: 320 LQTIGATTTDEYRKYIEKDAALERRFQPIQVSEPSIAETIEILKGLRARYENHHHVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ + +I KEK+
Sbjct: 380 GALQSAAELSARYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDNRIARIAKEKD 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
+ ++ Q FEKA ELRD++ L+A+ K KE S E E+ DV VV E I ++S
Sbjct: 440 QTIKDQQFEKAAELRDKQEKLEAE-----RKEKEKSWREGES-DVRMVVDEDVIAEVISQ 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +L+ ME+ LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFI
Sbjct: 494 STGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 554 FAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGEL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF + + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +V
Sbjct: 674 RDIAKTA-NTGFTMGGN-TESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQV 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ + ++ DRL + +EL +T++ ++ + E+G++P GARPLRR I R +ED+++E
Sbjct: 732 RQIVDLDVTKINDRLFERHMELDLTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDTISE 791
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L ++ + + VIVD + DG
Sbjct: 792 KILMGDLHDNERVIVDAEGDG 812
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REG+GVAA+ LE G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGDGVAAKALEAKGVTLEDTR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ T A
Sbjct: 61 KQVEEMIGKGTAA 73
>gi|160935533|ref|ZP_02082908.1| hypothetical protein CLOBOL_00423 [Clostridium bolteae ATCC
BAA-613]
gi|158441277|gb|EDP18987.1| hypothetical protein CLOBOL_00423 [Clostridium bolteae ATCC
BAA-613]
Length = 869
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/735 (55%), Positives = 555/735 (75%), Gaps = 12/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +VI + EA R IG+EH+L+ +LREG+ VA+R+L +G + + ++
Sbjct: 81 YTPRARRVIENSYREAVRFKAAQIGTEHILIAMLREGDCVASRLLNTIGVNIQKLYIDLL 140
Query: 155 RMVGESTEAVG---AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+GE A G G GN PTL+ Y NLT+LA GKLDPV+GR+ +I+RV+Q
Sbjct: 141 AAMGEDAPAAKDDLQGARAGKRGNATPTLDSYSRNLTQLATAGKLDPVIGREQEIQRVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNPCLIGEPGVGKTA+ EGLAQ IASG+VP+TI K+V+TLD+ +VAG+KYR
Sbjct: 201 ILSRRTKNNPCLIGEPGVGKTAVVEGLAQMIASGNVPETIADKRVVTLDLSGMVAGSKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK++ E+ +S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGE+Q IGA
Sbjct: 261 GEFEERIKKVISEVVESGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGEIQLIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT++EYRK+IEKD ALERRFQPV V EP+ DE++ ILKGLR RYE HHK+ TD AL +A
Sbjct: 321 TTINEYRKYIEKDSALERRFQPVTVDEPTEDESVAILKGLRSRYEEHHKVEITDHALEAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YI+DRFLPDKAIDLIDEA S+VRL++ P + ++ E E+ + + K EA++ +
Sbjct: 381 VKLSSRYINDRFLPDKAIDLIDEAASKVRLQNYTKPAKIKDYEAEIDGLEEAKEEAIKRE 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+EKAGE++ ++ ++ +I+ ++K ++ +++ +V++ +I +VS WT IPV
Sbjct: 441 AYEKAGEIKKKQEKIREKIAQTMEKWQKDKESKK------LIVSDNEIADVVSGWTRIPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ +ES+RL +E LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTG
Sbjct: 495 RKLAEEESERLRNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPKRPIGSFLFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KAL+ FG+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR
Sbjct: 555 VGKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY V+LFDEIEKAHPDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I
Sbjct: 615 NPYCVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-IS 673
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+R+GF + D K + YN +K V +E+K+ F+PEFLNR+DE+IVF QLT+ +K IADI
Sbjct: 674 PKRLGFGMVSDAK-ADYNFMKDRVMDEVKRLFKPEFLNRIDEIIVFHQLTREHIKGIADI 732
Query: 752 MLKEVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
ML + R K + I L+VT+ RE ++++GY+ YGARPLRR I L+ED MAE+ML
Sbjct: 733 MLGTIGKRCKEQLGIGLEVTDSAREHLIDKGYDDKYGARPLRRTIQNLVEDRMAEEMLDG 792
Query: 811 EIKEGDSVIVDVDSD 825
IK G V V D +
Sbjct: 793 RIKAGSLVEVGFDGE 807
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M ER+T +A + + LA A L H Y+G+EHLL+GLL+EG GVAA+VLE G + +
Sbjct: 1 MMERYTPQAQEALGLAVGVAETLNHGYVGTEHLLIGLLQEGTGVAAKVLEENGVEEDRVI 60
Query: 151 TQVIRMV 157
V +++
Sbjct: 61 ELVSQLI 67
>gi|31794773|ref|NP_857266.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis AF2122/97]
gi|57117131|ref|YP_177995.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|121639516|ref|YP_979740.1| ATP-dependent Clp protease ATP-binding subunit clpC [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148663461|ref|YP_001284984.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148824802|ref|YP_001289556.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|167968197|ref|ZP_02550474.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis H37Ra]
gi|224992013|ref|YP_002646702.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800637|ref|YP_003033638.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289445190|ref|ZP_06434934.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289747433|ref|ZP_06506811.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|294993716|ref|ZP_06799407.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis 210]
gi|297636272|ref|ZP_06954052.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN 4207]
gi|297733266|ref|ZP_06962384.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN R506]
gi|306791193|ref|ZP_07429495.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|307086394|ref|ZP_07495507.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|313660596|ref|ZP_07817476.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN V2475]
gi|340628561|ref|YP_004747013.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|375297863|ref|YP_005102130.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|378773377|ref|YP_005173110.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|383309326|ref|YP_005362137.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|385992823|ref|YP_005911121.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|385996461|ref|YP_005914759.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|386000382|ref|YP_005918681.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|392388189|ref|YP_005309818.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|392434075|ref|YP_006475119.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|397675551|ref|YP_006517086.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|422814849|ref|ZP_16863067.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|424806159|ref|ZP_18231590.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|424945484|ref|ZP_18361180.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|433628738|ref|YP_007262367.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|433632691|ref|YP_007266319.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|433636704|ref|YP_007270331.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|433643788|ref|YP_007289547.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|449065710|ref|YP_007432793.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
gi|61221148|sp|P0A522.1|CLPC_MYCTU RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|61221149|sp|P0A523.1|CLPC_MYCBO RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|31620370|emb|CAD95813.1| PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPC
[Mycobacterium bovis AF2122/97]
gi|121495164|emb|CAL73650.1| Probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148507613|gb|ABQ75422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148723329|gb|ABR07954.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|224775128|dbj|BAH27934.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253322140|gb|ACT26743.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289418148|gb|EFD15349.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289687961|gb|EFD55449.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|308340222|gb|EFP29073.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|308364160|gb|EFP53011.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|323717705|gb|EGB26905.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|326905435|gb|EGE52368.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|328460368|gb|AEB05791.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|339296415|gb|AEJ48526.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|339300016|gb|AEJ52126.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|340006751|emb|CCC45939.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|341603537|emb|CCC66218.1| probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221429|gb|AEN02060.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|356595698|gb|AET20927.1| Putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|358229999|dbj|GAA43491.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|378546740|emb|CCE39019.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|379029983|dbj|BAL67716.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
gi|380723279|gb|AFE18388.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|392055484|gb|AFM51042.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|395140456|gb|AFN51615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|432156344|emb|CCK53602.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|432160336|emb|CCK57659.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|432164284|emb|CCK61736.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|432168297|emb|CCK65831.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|440583104|emb|CCG13507.1| putative ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPC1
[Mycobacterium tuberculosis 7199-99]
gi|444897153|emb|CCP46419.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|449034218|gb|AGE69645.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
Length = 848
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/739 (57%), Positives = 563/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD+ L +T+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|15843209|ref|NP_338246.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
gi|13883563|gb|AAK48060.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
Length = 848
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/739 (57%), Positives = 563/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD+ L +T+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A KV++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARKVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|38234547|ref|NP_940314.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae NCTC 13129]
gi|38200810|emb|CAE50514.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae]
Length = 883
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/778 (54%), Positives = 573/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 85 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 144
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 145 QLLSGYEGGESPENNNEGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 203
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 204 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 263
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 264 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 323
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 324 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 383
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 384 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 443
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +GD+
Sbjct: 444 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGDLED 493
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRAIRR
Sbjct: 494 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRT 553
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 554 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 613
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 614 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 673
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 674 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLN 732
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 733 RIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 792
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 793 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 850
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 6 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 65
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 66 QEVEEIIGHGSE 77
>gi|308232509|ref|ZP_07416289.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308371394|ref|ZP_07424826.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308372592|ref|ZP_07429192.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308373956|ref|ZP_07434280.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308374925|ref|ZP_07442106.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308376170|ref|ZP_07437892.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308378380|ref|ZP_07482390.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308379552|ref|ZP_07486731.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308380740|ref|ZP_07490948.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
gi|308213724|gb|EFO73123.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308328891|gb|EFP17742.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308332729|gb|EFP21580.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308343544|gb|EFP32395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308348011|gb|EFP36862.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308351952|gb|EFP40803.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308352738|gb|EFP41589.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308356587|gb|EFP45438.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308360544|gb|EFP49395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
Length = 827
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/739 (57%), Positives = 563/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 119 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 178
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 179 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 238
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 239 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 298
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 299 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAM 358
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 359 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 418
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 419 DAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 469
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 470 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 529
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 530 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 589
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 590 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 649
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 650 SDISK---PVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEI 706
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD+ L +T+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 707 IRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 766
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 767 KILFEEVGPGQVVTVDVDN 785
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA 163
L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R+QV ++G+ +A
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQA 52
>gi|392401263|ref|YP_006437863.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
gi|390532341|gb|AFM08070.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
Length = 874
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/752 (55%), Positives = 563/752 (74%), Gaps = 32/752 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 69 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 128
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 129 QLLSGYEGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 187
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 188 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 247
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 248 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 307
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 308 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 367
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 368 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 427
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEM-SKAETEAGDVGP 492
+ + ++ +EK A+ QDFEKA LRD E L + + +K K+ S A E +VG
Sbjct: 428 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEERA---EKEKQWRSGALEEIAEVG- 483
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 484 ---EEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTRA 540
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+
Sbjct: 541 GLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGA 600
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDF
Sbjct: 601 PPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVDF 660
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 731
KNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR+
Sbjct: 661 KNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYSRMKQKVNDELKKHFRPEFLNRI 719
Query: 732 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 791
DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARPL
Sbjct: 720 DEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARPL 779
Query: 792 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
RR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 780 RRTIQREIEDALSEKILFGEVGAGEIVTVDVE 811
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 102 VIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
+I+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R +V ++G +
Sbjct: 1 MIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS 60
Query: 162 E 162
E
Sbjct: 61 E 61
>gi|315446238|ref|YP_004079117.1| chaperone ATPase [Mycobacterium gilvum Spyr1]
gi|315264541|gb|ADU01283.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
gilvum Spyr1]
Length = 847
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/739 (57%), Positives = 567/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILKGLRDRYEAHHRVSITDGAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G D++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGDNNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++LK KD+ +++T + + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IQMVDLMIGRVGNQLKAKDMAMELTPKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDV++
Sbjct: 788 KILFEELGPGQLVTVDVEN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|375291593|ref|YP_005126133.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 241]
gi|376246431|ref|YP_005136670.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC01]
gi|376249217|ref|YP_005141161.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC04]
gi|376285444|ref|YP_005158654.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 31A]
gi|376293971|ref|YP_005165645.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC02]
gi|419861512|ref|ZP_14384144.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
gi|371578959|gb|AEX42627.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 31A]
gi|371581264|gb|AEX44931.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 241]
gi|372109061|gb|AEX75122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC01]
gi|372111294|gb|AEX77354.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC02]
gi|372115785|gb|AEX81843.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC04]
gi|387981983|gb|EIK55504.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
Length = 878
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/778 (54%), Positives = 573/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNDGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +GD+
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGDLED 488
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRAIRR
Sbjct: 489 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRT 548
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 549 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 608
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 609 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 668
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 669 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLN 727
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 728 RIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 787
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 788 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|376255026|ref|YP_005143485.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae PW8]
gi|372118110|gb|AEX70580.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae PW8]
Length = 878
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/778 (54%), Positives = 573/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNDGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +GD+
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGDLED 488
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRAIRR
Sbjct: 489 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRT 548
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 549 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 608
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 609 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 668
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 669 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLN 727
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 728 RIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 787
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 788 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|108801719|ref|YP_641916.1| ATPase [Mycobacterium sp. MCS]
gi|119870870|ref|YP_940822.1| ATPase [Mycobacterium sp. KMS]
gi|108772138|gb|ABG10860.1| ATPase AAA-2 [Mycobacterium sp. MCS]
gi|119696959|gb|ABL94032.1| ATPase AAA-2 domain protein [Mycobacterium sp. KMS]
Length = 847
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/739 (56%), Positives = 567/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ + E+ AG GG + P+ L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKESAEAGTGGRGGESGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILKGLRDRYEAHHRVSITDGAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++L+ KD+ +++T++ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IKMVDLMIGRVGNQLRAKDMTMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L EI G + VDV++
Sbjct: 788 KILFEEIGPGQLITVDVEN 806
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|294791953|ref|ZP_06757101.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
6_1_27]
gi|294457183|gb|EFG25545.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
6_1_27]
Length = 815
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/826 (51%), Positives = 583/826 (70%), Gaps = 41/826 (4%)
Query: 35 MMSYMQPSASRISSFSGLRRSNALDTFTCDFHSTVAVSLSSRRGKSGRAG------GFVV 88
MM A R+ S L + AL+ D+ T V + + K+G A G V
Sbjct: 1 MMQRFTDDAQRVLS---LAQEAALE-LGHDYVGTEHVLIGLTKVKNGVAAKALEELGLVT 56
Query: 89 KAMFE-------RFTEKAIKVIM---------LAQEEARRLGHNYIGSEHLLLGLLREGE 132
+ +FE R +KA + M LA + A + HNY+G+EH+LLGLL +G
Sbjct: 57 EDIFEAVEEHVGRGNKKATSIYMTPRVKHVLELAIQVANHMNHNYVGTEHILLGLLSDGS 116
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
GVA +L + +++ + ++G + + G G +S N + L ++ T+L + A+
Sbjct: 117 GVAVAILRAMNIRSNDVVEAIRSILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAK 176
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ +
Sbjct: 177 QGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILR 236
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++I+L +G ++AG KYRGEFEERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+D
Sbjct: 237 NKRIISLSIGSMLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMD 296
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARGE Q IGATTLDEY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR
Sbjct: 297 AANILKPALARGEFQVIGATTLDEYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLR 356
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HK + TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR++ + +
Sbjct: 357 DRYEAFHKAKITDEALTAAVSLSSRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKA 416
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
LE L + KEK AV QDFEKA +LRD E L +I DK K ++K E D
Sbjct: 417 LEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQSLVKEIG---DK-KSIAK---EKSDQKL 469
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
+VTE DI +V+ WTGIPV K++ +ES LL +EE LHKRV+GQDEAV A+++A+RRAR
Sbjct: 470 IVTEEDIAAVVAQWTGIPVAKIAEEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARA 529
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+
Sbjct: 530 GLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGA 589
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D FN++LQ+L+DGRLTDS+GR VDF
Sbjct: 590 PPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRNVDF 649
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGF------DLDYDE-KDSSYNRIKSLVTEELKQYFRP 725
+NT++IMTSN+G+ + K +GF D + DE K + K V + +K+YFRP
Sbjct: 650 RNTVIIMTSNLGAKALHKNSPELGFLAAKKADSNVDENKGIDFKEAKKSVMDAVKRYFRP 709
Query: 726 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPS 785
EFLNR+DEMIVF LT+ ++KEI I++ +V RL+ +D++L+++ + +V+EG + +
Sbjct: 710 EFLNRIDEMIVFHPLTEEDLKEIVTILMSDVTKRLEERDLQLEISPEAMKLLVKEGSDFT 769
Query: 786 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNVTV 830
GARPL+RAI RL+ED +++ +L + KEG + D D+D V++
Sbjct: 770 MGARPLKRAIQRLIEDPVSDLILKGDAKEGKIIKADAKDNDLVVSI 815
>gi|420237566|ref|ZP_14742031.1| Clp protease [Parascardovia denticolens IPLA 20019]
gi|391879188|gb|EIT87700.1| Clp protease [Parascardovia denticolens IPLA 20019]
Length = 862
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/739 (54%), Positives = 570/739 (77%), Gaps = 15/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL +G D +N+RT VI
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLVKMGVDIANLRTTVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT-------LEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+ +++ +G S G T L+++G NLT+ A++GKLDPV+GR +IE
Sbjct: 140 DSIRDTSAGSSSGQMANSGGVADKTNRSGSSLLDQFGRNLTQEAKDGKLDPVIGRSNEIE 199
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+ +L RRTKNNP LIGEPGVGKTA+ EGLA++I + DVP+T++ K++ LD+G ++AG
Sbjct: 200 RVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAEKIVADDVPETLKDKQIYALDLGSMIAG 259
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +++LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ
Sbjct: 260 SRYRGDFEERLKKVLKEIQVRGDVVLFIDEIHTIVGAGSADGAMGASDMLKPMLARGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATT +EYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TDEA
Sbjct: 320 TIGATTTEEYRKYIEKDAALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDEA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ +AA+LS +YI DR LPDKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A
Sbjct: 380 IQAAAELSARYIQDRHLPDKAIDLIDEAGARLRIKRLTAPSALKELDMKVAKVKADKDQA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFEKA LRD + L+ + K KE S E E+ DV VVTE I H++S+ T
Sbjct: 440 IADQDFEKAASLRDAQEKLEQE-----RKDKEKSWREGES-DVSMVVTEDTIAHVISSST 493
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ ES +LL ME++LHKRVIGQDEAV A++R+IRRARVGLK+P RP SFIF+
Sbjct: 494 GIPVFKLTETESKKLLGMEDSLHKRVIGQDEAVSALARSIRRARVGLKDPRRPSGSFIFA 553
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA Y F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE
Sbjct: 554 GPTGVGKTELAKALAEYLFDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTE 613
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G+S
Sbjct: 614 KVRRKPFSVILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTSK 673
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I + + GF+L + ++SY R+K V ELK FRPEFLNRLD++IVF+QLT+ +V++
Sbjct: 674 ISQ-AQNTGFNLG-GQTETSYQRMKDQVQSELKGQFRPEFLNRLDDIIVFKQLTEPQVRQ 731
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ +K + DRL + + +++T++ ++ + E+G++P GARPLRR I R +ED+++EK+
Sbjct: 732 IVDLDVKALNDRLFERHMTVELTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAISEKI 791
Query: 808 LAREIKEGDSVIVDVDSDG 826
L ++KE ++VD + +G
Sbjct: 792 LLGDLKENQEIVVDAEGEG 810
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALKHNYIGTEHLLLGLIREGEGVAAKSLASKGVELDAAR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ + A
Sbjct: 61 QQVEEMIGKGSAA 73
>gi|384190952|ref|YP_005576700.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|384192096|ref|YP_005577843.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|289178444|gb|ADC85690.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|340364833|gb|AEK30124.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
Length = 862
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/741 (55%), Positives = 564/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D S++R+ I
Sbjct: 92 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLSDLRSTTI 151
Query: 155 RMV--------GESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
M+ G+ + AG V S + L+++G NLT A++GKLDPV+GR +
Sbjct: 152 DMIRGNSGNGEGDKGDMANAGSVQDKRSQSGSAILDQFGRNLTAEAKDGKLDPVIGRSTE 211
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +V
Sbjct: 212 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGDVPETLKDKQVYSLDLGSMV 271
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 272 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 331
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH + TD
Sbjct: 332 LQTIGATTTDEYRKYIEKDAALERRFQPIQVSEPSIAETIEILKGLRARYENHHHVTITD 391
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ + +I KEK+
Sbjct: 392 GALQSAAELSARYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDNRIARIAKEKD 451
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
+ ++ Q FEKA ELRD++ L+A+ K KE S E E+ DV VV E I ++S
Sbjct: 452 QTIKDQQFEKAAELRDKQEKLEAE-----RKEKEKSWREGES-DVRMVVDEDVIAEVISQ 505
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +L+ ME+ LHKR+IGQDEAV A+SR+IRR RVGLK+P RP SFI
Sbjct: 506 STGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFI 565
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 566 FAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGEL 625
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 626 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 685
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF + + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +V
Sbjct: 686 RDIAKTA-NTGFTMGGN-TESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFRQLTEPQV 743
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ + ++ DRL + +EL +T++ ++ + E+G++P GARPLRR I R +ED+++E
Sbjct: 744 RQIVDLDVTKINDRLFERHMELDLTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDTISE 803
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L ++ + + VIVD + DG
Sbjct: 804 KILMGDLHDNERVIVDAEGDG 824
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 90 AMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
+MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REG+GVAA+ LE G +
Sbjct: 12 SMFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGDGVAAKALEAKGVTLEDT 71
Query: 150 RTQVIRMVGESTEA 163
R QV M+G+ T A
Sbjct: 72 RKQVEEMIGKGTAA 85
>gi|384507453|ref|YP_005684122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|384511635|ref|YP_005691213.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|387137283|ref|YP_005693263.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302206878|gb|ADL11220.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|341825574|gb|AEK93095.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|348607728|gb|AEP71001.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
Length = 885
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/753 (55%), Positives = 561/753 (74%), Gaps = 34/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYAGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYSRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 790 LRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|339633595|ref|YP_004725237.1| ATP-dependent protease ATP-binding subunit CLPC1 [Mycobacterium
africanum GM041182]
gi|339332951|emb|CCC28678.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium africanum GM041182]
Length = 848
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/739 (57%), Positives = 562/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGRGKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD+ L +T+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDVD+
Sbjct: 788 KILFEEVGPGQVVTVDVDN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|427414117|ref|ZP_18904307.1| hypothetical protein HMPREF9282_01714 [Veillonella ratti
ACS-216-V-Col6b]
gi|425714493|gb|EKU77496.1| hypothetical protein HMPREF9282_01714 [Veillonella ratti
ACS-216-V-Col6b]
Length = 816
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/747 (54%), Positives = 567/747 (75%), Gaps = 19/747 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +V+ LA A ++ HNY+G+EHLLLG+L++G+GVA VL ++G +++ +
Sbjct: 78 ITPRTKRVLQLAVGIANQMQHNYVGAEHLLLGILQDGDGVAVNVLYSMGIRSNDVVKAIN 137
Query: 155 RMVG-ESTEAVGAGVGGGSSG--NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+ G E A GAG G GS+ + + L+++ T+L ++A++GK+DPV+GR +I RV+Q
Sbjct: 138 NIYGSEQGGAEGAGNGSGSANGSSNLGDLKDFATDLNEVAKQGKIDPVIGRDNEINRVIQ 197
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNP LIGEPGVGKTAIAEGLAQRI S +VP+ + K++I+L + +VAG KYR
Sbjct: 198 ILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSQNVPEILRNKRIISLSLTAMVAGAKYR 257
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEERLKK ++E+++ D++I+FIDE+HTLIGAGA+EG++DAANILKP+LARG Q IGA
Sbjct: 258 GEFEERLKKAIDEVQKHDDMIIFIDELHTLIGAGASEGSMDAANILKPALARGTFQVIGA 317
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEY+KHIEKD ALERRFQPV V EPS +E ++ILKGLR+RYE HK + TDEAL +A
Sbjct: 318 TTLDEYKKHIEKDAALERRFQPVLVGEPSEEEALEILKGLRDRYEAFHKAKITDEALKAA 377
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YISDRFLPDKAID++DEA S+VR++ P + ++LE L + KEK AV GQ
Sbjct: 378 VELSSRYISDRFLPDKAIDVMDEAASKVRMKVFTAPPDVKDLETRLADVRKEKEAAVTGQ 437
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
++E+A +LRD E L +I A K SK + E VVTE DI +VS W+G+PV
Sbjct: 438 NYEEAAKLRDEEKKLVDEIEA---KQAARSKEDEEK----LVVTEDDIAAVVSQWSGVPV 490
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ +ES+RLL++E+ LH+RV+GQDEAV A+S+A+RRAR GLK+P RPI SF+F GPTG
Sbjct: 491 AKIAEEESERLLRLEDELHERVVGQDEAVVAVSKAVRRARAGLKDPKRPIGSFLFLGPTG 550
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELA+ALAA FG E AMIRLDMSE+ME+HTVS+L+G+PPGYVGY EGGQLT+AVRR
Sbjct: 551 VGKTELARALAANLFGDENAMIRLDMSEYMEKHTVSRLVGAPPGYVGYDEGGQLTDAVRR 610
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+V+LFDE+EKAHPD FN++LQ+L+DGRLTD++GRTVDF+NT++IMTSN+GS+ +++
Sbjct: 611 KPYSVILFDEVEKAHPDFFNILLQVLDDGRLTDNQGRTVDFRNTVIIMTSNLGSNFLKED 670
Query: 692 GRRIGFDLDYDEKD-------SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+GF L KD S++ K + +K++FRPEFLNR+DEM+VF LT +
Sbjct: 671 SAAMGF-LAAKSKDDAKKNAESNFAEAKKNTLDAVKRHFRPEFLNRIDEMVVFHPLTGED 729
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I +I+LK+V RL +D+ L+V+ E +V+EG + +YGARPL+RAI RL+ED ++
Sbjct: 730 LGKIVNILLKDVTKRLAERDLALEVSPEALEVLVKEGSDFAYGARPLKRAIQRLVEDPIS 789
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVL 831
+ +L + G + +V DG++T++
Sbjct: 790 DLILKGDAPAGSVIKANV-VDGDITMV 815
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT+ A + + +AQE+++ GH+Y+G+EHLLL L E + VA++ L +LG +
Sbjct: 1 MFERFTDGAQRALGIAQEKSKEFGHDYVGTEHLLL-GLLEEDSVASKALHSLGLEDEVTE 59
Query: 151 TQVIRMVG 158
V+ VG
Sbjct: 60 KAVLDAVG 67
>gi|337291601|ref|YP_004630622.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
gi|334699907|gb|AEG84703.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
Length = 885
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/777 (54%), Positives = 568/777 (73%), Gaps = 35/777 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYTRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVGRVSKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
LRR I R +ED+++EK+L E+ G+ V VDV+ DG + ++ PLP
Sbjct: 790 LRRTIQREIEDALSEKILFGEVGAGEIVTVDVEGWDGESKETDKATFTFAPRPKPLP 846
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|306823273|ref|ZP_07456649.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Bifidobacterium dentium ATCC 27679]
gi|309801911|ref|ZP_07696026.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
dentium JCVIHMP022]
gi|304553905|gb|EFM41816.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Bifidobacterium dentium ATCC 27679]
gi|308221467|gb|EFO77764.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
dentium JCVIHMP022]
Length = 863
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/763 (54%), Positives = 577/763 (75%), Gaps = 25/763 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL + + +R+ I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATI 139
Query: 155 RMV-GESTEAVGAGVG-----GG------SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G S + G G G GG SG+ + L+++G NLT A GKLDPV+GR
Sbjct: 140 DLIRGNSGGSQGEGKGDLANAGGVQDRRNQSGSAI--LDQFGRNLTAEAASGKLDPVIGR 197
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G
Sbjct: 198 SSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKGKQVYSLDLG 257
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
+VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LA
Sbjct: 258 SMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLA 317
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLRERYE HH +
Sbjct: 318 RGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHHVT 377
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R+R P E +EL+ ++ ++ +
Sbjct: 378 ITDGALQSAAELSSRYIQDRHLPDKAIDLIDEAGARLRIRRLTAPPELKELDAKVAKLAE 437
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHI 502
EK++A++ QDFEKA ELRDR+ L+A+ K KE S E E+ DV VV E I +
Sbjct: 438 EKDQAIKDQDFEKAAELRDRQEKLEAE-----RKEKESSWREGES-DVKMVVDEDVIAEV 491
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
+S TGIPV K++ ES +L+ ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP
Sbjct: 492 ISQTTGIPVFKLTQAESKKLMSMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSG 551
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EG
Sbjct: 552 SFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEG 611
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
G+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N
Sbjct: 612 GELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTN 671
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+
Sbjct: 672 LGTRDIAKAA-NTGFNLGTN-TESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTE 729
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
+V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+
Sbjct: 730 PQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDA 789
Query: 803 MAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
++EK+L ++++G V VD + +G +L + + E+ +P+
Sbjct: 790 ISEKILMGDLEDGQRVKVDAEGEG---ILGEFTFSGEAFEEPV 829
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVSLDDTR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|383314945|ref|YP_005375800.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|384509550|ref|YP_005686218.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|385808249|ref|YP_005844646.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
gi|308277132|gb|ADO27031.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|380870446|gb|AFF22920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|383805642|gb|AFH52721.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
Length = 885
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/753 (55%), Positives = 561/753 (74%), Gaps = 34/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYSRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 790 LRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|206901239|ref|YP_002251189.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
gi|206740342|gb|ACI19400.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
Length = 823
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/745 (55%), Positives = 569/745 (76%), Gaps = 22/745 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ A E A+ L HNYIG+EHLLLGLL+EGEGVAA VLE +G ++ +++
Sbjct: 80 FTSRAKKVLEYASESAQELNHNYIGTEHLLLGLLKEGEGVAAHVLEGMGVRLEDVTIEIL 139
Query: 155 RMVGES---TEAVGAGVGGGSSGNKM-------PTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+++GE T+ G S+ N + TL+E+G +LT+LA +GKLDP++GR+
Sbjct: 140 KLLGEPIDPTKIRGRQQMNTSTNNSLKKKRTVTATLDEFGRDLTQLARQGKLDPIIGREK 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ER++QIL RRTKNNP L+GEPGVGKTAI EGLAQ+I GDVPDT+ K+++ +DMG +
Sbjct: 200 ELERIIQILSRRTKNNPVLVGEPGVGKTAIVEGLAQKIVEGDVPDTLLNKRIVAIDMGSI 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAGTKYRGEFEER+++++EE+K + ++ILFIDE+HTL+GAGAAEGA+DAANILKPSLA+G
Sbjct: 260 VAGTKYRGEFEERMQRIIEEVKMAKDVILFIDEIHTLVGAGAAEGAVDAANILKPSLAKG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
E+Q IGATT EYRK+IEKD ALERRFQP+ V EP+ +ETIQILKGL+ERYE +H+++ T
Sbjct: 320 EIQLIGATTPSEYRKYIEKDGALERRFQPIMVDEPTPEETIQILKGLKERYENYHRVKIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEA+ A +LS +YI+DRFLPDKAID+IDEA +RVRLR + ++ LE EL +I ++K
Sbjct: 380 DEAIEEAVKLSVRYITDRFLPDKAIDVIDEASARVRLRKQKNTAQS-NLELELARIREQK 438
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
A+R Q FE+A +LRD E ++ + +D T + G VVT D+ +V+
Sbjct: 439 EIAIRNQAFERAAQLRDEERKIEEYLRNFIDT--------TAPSNFG-VVTPEDVAQVVA 489
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
WTGIPV ++ +E +RLL+MEE LHKR+I QDEAV+ +SRAIRR+R GLK+P RPI F
Sbjct: 490 TWTGIPVAQLLIEERERLLRMEEELHKRIISQDEAVRVVSRAIRRSRSGLKDPRRPIGVF 549
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
+F GPTGVGK+ELA+ALA Y FG+E A+IR DMSEFME+HTVS+LIG+PPGYVGY EGGQ
Sbjct: 550 MFLGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHTVSRLIGAPPGYVGYEEGGQ 609
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE V RRPY+V+L DEIEKAH DVFN++LQI+++G+LTD GR V FKNT+LIMTSN G
Sbjct: 610 LTEKVHRRPYSVILLDEIEKAHSDVFNILLQIMDEGQLTDGHGRRVSFKNTILIMTSNFG 669
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ ++ IGF ++++ S+++IK L+ E+K+YFRPEFLNRLDE++ FR LTK +
Sbjct: 670 AEYFKQEA-SIGF-ASKEDREKSFDKIKELILSEMKKYFRPEFLNRLDEIVFFRPLTKDD 727
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+K+I +++LK V +RL+ K ++L++++ +E ++E+GY+P YGARPL+R I +ED +A
Sbjct: 728 LKQILELLLKPVRERLREKRLDLEISDEVKEFLLEKGYDPQYGARPLKRTIQYYMEDPLA 787
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVT 829
E +L E KEGD + ++D GN+
Sbjct: 788 EFILQGEFKEGDVIKAELDKKGNIV 812
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 62/88 (70%), Gaps = 9/88 (10%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M ++ T++A +V++LAQEEARRL ++ +G+EH+LLGL+RE G+AA+VL NLG D +++R
Sbjct: 1 MMDKLTQRAYRVLLLAQEEARRLNYSTVGTEHILLGLIREEGGIAAQVLINLGLDLNHLR 60
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNKMP 178
++ R++G G G+S +P
Sbjct: 61 NEIERLIGR---------GDGTSYGALP 79
>gi|384516372|ref|YP_005711464.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
gi|334697573|gb|AEG82370.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
Length = 885
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/777 (54%), Positives = 568/777 (73%), Gaps = 35/777 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYTRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVGRVSKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
LRR I R +ED+++EK+L E+ G+ V VDV+ DG + ++ PLP
Sbjct: 790 LRRTIQREIEDALSEKILFGEVGAGEIVTVDVEGWDGESKETDKATFTFAPRPKPLP 846
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|404443896|ref|ZP_11009061.1| ATPase [Mycobacterium vaccae ATCC 25954]
gi|403654831|gb|EJZ09729.1| ATPase [Mycobacterium vaccae ATCC 25954]
Length = 847
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/739 (56%), Positives = 568/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G+ T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V +L KD+ +++T++ + + + G++P GARPLRR I R +ED+++E
Sbjct: 728 IKMVDLMIGRVSKQLAAKDMTMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDV++
Sbjct: 788 KILFEEVGPGQLVTVDVEN 806
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|171743328|ref|ZP_02919135.1| hypothetical protein BIFDEN_02459 [Bifidobacterium dentium ATCC
27678]
gi|171278942|gb|EDT46603.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium dentium ATCC 27678]
Length = 863
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/763 (54%), Positives = 577/763 (75%), Gaps = 25/763 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL + + +R+ I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATI 139
Query: 155 RMV-GESTEAVGAGVG-----GG------SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G S + G G G GG SG+ + L+++G NLT A GKLDPV+GR
Sbjct: 140 DLIRGNSGGSQGEGKGDLANAGGVQDRRNQSGSAI--LDQFGRNLTAEAASGKLDPVIGR 197
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G
Sbjct: 198 SSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKGKQVYSLDLG 257
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
+VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LA
Sbjct: 258 SMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLA 317
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLRERYE HH +
Sbjct: 318 RGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHHVT 377
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL SAA+LS +YI DR LPDKAIDLIDEAG+R+R+R P E +EL+ ++ ++ +
Sbjct: 378 ITDGALQSAAELSSRYIQDRHLPDKAIDLIDEAGARLRIRRLTAPPELKELDAKVAKLAE 437
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHI 502
EK++A++ QDFEKA ELRDR+ L+A+ K KE S E E+ DV VV E I +
Sbjct: 438 EKDQAIKDQDFEKAAELRDRQEKLEAE-----RKEKESSWREGES-DVKMVVDEDVIAEV 491
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
+S TGIPV K++ ES +L+ ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP
Sbjct: 492 ISQTTGIPVFKLTQAESKKLMSMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSG 551
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EG
Sbjct: 552 SFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEG 611
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
G+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N
Sbjct: 612 GELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTN 671
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+
Sbjct: 672 LGTRDIAKAA-NTGFNLGTN-TESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTE 729
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
+V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+
Sbjct: 730 PQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDA 789
Query: 803 MAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
++EK+L ++++G V VD + +G +L + + E+ +P+
Sbjct: 790 ISEKILMGDLEDGQRVKVDAEGEG---ILGEFTFSGEAFEEPV 829
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVSLDDTR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|218134185|ref|ZP_03462989.1| hypothetical protein BACPEC_02075 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991560|gb|EEC57566.1| ATPase family associated with various cellular activities (AAA)
[[Bacteroides] pectinophilus ATCC 43243]
Length = 819
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/730 (55%), Positives = 552/730 (75%), Gaps = 12/730 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +++ A EA R IG+EHLL+ +++E + VAAR+L +G + + ++
Sbjct: 81 YTPRARRILEAASREAIRFKSPLIGTEHLLIAIIKESDSVAARLLNTIGVNIKKLYVDLM 140
Query: 155 RMVGESTEAVGAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+GE T G N TL++Y +LT+L EGKLDPV+GR+ +IERV+Q
Sbjct: 141 MAMGEDTGNYKEDFQNGKPRDRKNSTQTLDQYSRDLTQLVREGKLDPVIGREKEIERVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNPCLIGEPGVGKTAIAEG+A +IA+GDVPDTI+ K+++TLD+ +VAG+KYR
Sbjct: 201 ILSRRTKNNPCLIGEPGVGKTAIAEGIAAKIAAGDVPDTIKDKRLVTLDLSGMVAGSKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK++ E+KQ+ ++LF+DE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IGA
Sbjct: 261 GEFEERIKKVIAEVKQAGNVLLFLDELHTIIGAGGAEGAIDASNILKPSLARGEIQLIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTL+EYRK+IEKD ALERRFQPV+V EPS +E + ILKGLR +YE HHK+ TDEA+ +A
Sbjct: 321 TTLEEYRKYIEKDAALERRFQPVRVEEPSEEEAVLILKGLRPKYEEHHKVTITDEAVEAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
++S +YI+DRFLPDKAIDLIDEA SRVRL +P+ ++LE ++ Q+ EK + +R +
Sbjct: 381 VKMSSRYINDRFLPDKAIDLIDEAASRVRLSSYAMPDSIKKLESQISQLENEKEDCIRHE 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+E AGE++ ++ L+ ++ +E K +TE V E +I +V+ WT IPV
Sbjct: 441 AYEDAGEIKKKQNKLREKVKK---SREEWEKTKTEQ---QLFVGENEIADVVAMWTKIPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+K++ ES+RL+K+EETLH RV+GQDEAV A++RAIRR RVGLK+P RPI SF+F GPTG
Sbjct: 495 QKLAVAESERLMKLEETLHARVVGQDEAVTAVARAIRRGRVGLKDPKRPIGSFLFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA FGSE A+IR+DMSE+ME+HTVSK+IGSPPGYVGY EGGQL+E VRR
Sbjct: 555 VGKTELSKALADAMFGSESALIRVDMSEYMEKHTVSKIIGSPPGYVGYDEGGQLSEKVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY+V+LFDEIEKAHPDVFN++LQ+L+DG +TDS GR VDFKNT++IMTSN G+ I
Sbjct: 615 NPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSTGRVVDFKNTVIIMTSNAGAENI-VA 673
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF++ DEK ++ +K V EE+++ F+PEFLNR+DE+IVF L K +++I DI
Sbjct: 674 PKTLGFNVGSDEK-QNHELMKGRVMEEVRRLFKPEFLNRIDEIIVFHVLNKSHMEKIVDI 732
Query: 752 MLKEVFDR-LKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
M+K V R L+ I +++TE ++ ++++GY+ YGARPLRRAI +ED MAEK+L
Sbjct: 733 MIKNVNARTLEQMKISIELTEEAKQYIIDKGYDSKYGARPLRRAIQTEIEDPMAEKILEG 792
Query: 811 EIKEGDSVIV 820
IK+G+ V+V
Sbjct: 793 TIKQGNRVLV 802
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
M RFT+KA + + A A +LGH YIGSEH+L+GLL+ + +A+ VLE D I
Sbjct: 1 MQSRFTKKAEEALQAAGLVAVQLGHGYIGSEHILIGLLQTEDSLASAVLERHDVDEERI 59
>gi|421076461|ref|ZP_15537448.1| ATPase AAA-2 domain protein [Pelosinus fermentans JBW45]
gi|392525472|gb|EIW48611.1| ATPase AAA-2 domain protein [Pelosinus fermentans JBW45]
Length = 812
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/740 (58%), Positives = 566/740 (76%), Gaps = 11/740 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A + I LA A LGHNY+G+EHLLLGLL+EGEGVAA++L+ L D + +V
Sbjct: 79 YTPRAKRCIELAINVAADLGHNYVGTEHLLLGLLQEGEGVAAQLLDGLDVDVQVLSQKVS 138
Query: 155 RMVGESTEAVGAGVGGGSS---GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
++ T + + PTLEE+G +L KLA EGK+DPV+GR +IERV+Q
Sbjct: 139 ELLSGFTASGQGVQQQSGGKQVSSNTPTLEEFGRDLNKLAREGKIDPVIGRGAEIERVLQ 198
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNP LIGEPGVGKTAIAEGLAQRI +VPD + K++I+L+M LVAG+KYR
Sbjct: 199 ILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQNNVPDILGVKRIISLNMASLVAGSKYR 258
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
G+FEERLKK++EE++Q +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IGA
Sbjct: 259 GDFEERLKKVLEEVRQDGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGEIQVIGA 318
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTL+EY+K+IEKD ALERRFQP+ V EPSV++ I IL+G+R++YE H++ TDEA+ +A
Sbjct: 319 TTLNEYKKYIEKDAALERRFQPITVSEPSVEDAITILQGVRDKYEAFHRISITDEAIEAA 378
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
LS++YISDRFLPDKAIDL+DEA +RVRL+ P +ELEK L+Q+ EK A+ Q
Sbjct: 379 VTLSHRYISDRFLPDKAIDLMDEAAARVRLKTFSSPSNVKELEKTLKQLQTEKEAAIAAQ 438
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
++E+A LRD E LK ++ + K KE + G+ VVT +I HIV+ WTGIPV
Sbjct: 439 EYEQAAHLRDEEKRLKNELES---KQKEWK----QQGNEQLVVTGEEIAHIVAVWTGIPV 491
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
EK++ +E+ RLL +EE LHKRVIGQ+EAVK+++RA+RRAR GLK+P RPI SFIF GPTG
Sbjct: 492 EKLAQEEAVRLLNLEEELHKRVIGQNEAVKSVARAVRRARAGLKDPKRPIGSFIFLGPTG 551
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELAKALAA F E +MIRLDMSE+ME+HTVS+LIG+PPGYVGY EGGQLT+AVRR
Sbjct: 552 VGKTELAKALAATLFNDESSMIRLDMSEYMEKHTVSRLIGAPPGYVGYDEGGQLTDAVRR 611
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY V+L DEIEKAH DVFN++LQ+LEDGRLTDS+GR VDFKNT++IMTSNVG+ + +
Sbjct: 612 KPYAVILLDEIEKAHYDVFNILLQVLEDGRLTDSQGRKVDFKNTVIIMTSNVGAKHLRRD 671
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF D D+ ++ K+ V EE+K+ FRPEF+NR+DEMIVF LT E+ I DI
Sbjct: 672 NTMLGFLAD-DKMNNEAENAKNRVMEEVKRTFRPEFINRVDEMIVFGSLTDTELTSIVDI 730
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
MLK+V RL+ + L+ +++ + +V+EG + +YGARPLRRAI +L+ED +AE ML +
Sbjct: 731 MLKDVGKRLEDNTLYLECSDKAKAELVKEGRDYAYGARPLRRAIQKLVEDEIAELMLRHQ 790
Query: 812 IKEGDSVIVDVDSDGNVTVL 831
+ +GD+V++DVD+DG V ++
Sbjct: 791 VIKGDTVLIDVDADGKVKLM 810
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M RFTE+A K + A +EA LGH+YIG+EHLLLGLL E EG+AA+ L ++ +R
Sbjct: 1 MLGRFTERAQKALHFAHQEAIGLGHDYIGTEHLLLGLLHESEGIAAKGLLSVNISIETVR 60
Query: 151 TQVIRMVG 158
+V ++VG
Sbjct: 61 MEVEKLVG 68
>gi|386741076|ref|YP_006214256.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
gi|384477770|gb|AFH91566.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
Length = 885
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/753 (55%), Positives = 561/753 (74%), Gaps = 34/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYSRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 790 LRRTIQREVEDALSEKILFGEVGAGEIVTVDVE 822
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|172041364|ref|YP_001801078.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448824288|ref|YP_007417457.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
gi|171852668|emb|CAQ05644.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448277785|gb|AGE37209.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
Length = 894
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/751 (56%), Positives = 566/751 (75%), Gaps = 31/751 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMVGESTE-----------AVG----AGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLD 197
+++ AV +G GG +G K +L +++G NLT+ A++GKLD
Sbjct: 140 QLLSGYEGGGEHEEAPDQPAVAGVAPSGQGGAKAGQKSNSLVLDQFGRNLTQAAKDGKLD 199
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T+ K+V
Sbjct: 200 PVVGRAGEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLRDKQVY 259
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+IL
Sbjct: 260 SLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASIL 319
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP LARGELQ IGATTL+EYRKHIEKD ALERRFQPV+VPEPSV +TI+ILKGLR+RYE
Sbjct: 320 KPKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVQVPEPSVADTIEILKGLRDRYEA 379
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++ TD AL SAA L+ +YI+DRFLPDKA+DL+DEAG+R+R++ P+ +E++ ++
Sbjct: 380 HHRVSITDGALRSAATLADRYINDRFLPDKAVDLLDEAGARMRIKRLTAPKSVQEVDDKI 439
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--VT 495
++ ++K A+ QDFEKA LRD E L ++ E KA AG++ V V
Sbjct: 440 AEVRRKKEAAIDEQDFEKAAALRDDE-------RTLTEERAEKEKA-WRAGELDEVAEVD 491
Query: 496 EVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLK 555
E I +++ WTGIPV K++ +ES RLL ME LHKR+IGQD+AVKA+SRAIRR R GLK
Sbjct: 492 EEQIAEVLANWTGIPVFKLTEEESSRLLDMEGELHKRIIGQDDAVKAVSRAIRRTRAGLK 551
Query: 556 NPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 615
+PNRP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF ++ T S+L G+PPG
Sbjct: 552 DPNRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQVDMGEFHDKFTASRLFGAPPG 611
Query: 616 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 675
YVGY EGGQLTE VRR+P++VVLFDEIEKA D++N +LQ+LE+GRLTD +GR VDFKNT
Sbjct: 612 YVGYDEGGQLTEKVRRKPFSVVLFDEIEKADKDIYNTLLQVLEEGRLTDGQGRIVDFKNT 671
Query: 676 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKD--SSYNRIKSLVTEELKQYFRPEFLNRLDE 733
+LI TSN+G+ I K +GF + E+D + Y R+KS V +ELK++FRPEFLNR+D+
Sbjct: 672 VLIFTSNLGTRDISK-AVGMGFS-NAGEQDEAAQYERMKSKVDDELKKHFRPEFLNRIDD 729
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
++VF QLT+ ++ ++ D+++ V L+ KD+ ++VTE+ + + + G++P GARPLRR
Sbjct: 730 IVVFHQLTREQIVQMVDLLMGRVRRALEDKDMGIEVTEKAKNLLAKRGFDPVLGARPLRR 789
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 824
I R +ED ++EK+L E G+ V VDV++
Sbjct: 790 TIQREIEDELSEKILFGEFGAGEIVTVDVEN 820
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 57/68 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL++EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 61 TEVKEIIG 68
>gi|376288455|ref|YP_005161021.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
gi|371585789|gb|AEX49454.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
Length = 877
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/774 (55%), Positives = 570/774 (73%), Gaps = 30/774 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNEGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVV 494
++ ++ +EK A+ QDFEKA LRD E L + + +K K+ E D+ V
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKLGEERA---EKEKQWRSGSLE--DIAE-V 492
Query: 495 TEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGL 554
E I ++ WTGIPV K++ +ES RLL MEE LHKR+IGQD+AVK++SRAIRR R GL
Sbjct: 493 GEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRTRAGL 552
Query: 555 KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 614
K+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L G+PP
Sbjct: 553 KDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPP 612
Query: 615 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 674
GYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR VDFKN
Sbjct: 613 GYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKN 672
Query: 675 TLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 733
T+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR+DE
Sbjct: 673 TVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLNRIDE 731
Query: 734 MIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRR 793
++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GARPLRR
Sbjct: 732 IVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGARPLRR 791
Query: 794 AIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 792 TIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|298527075|ref|ZP_07014484.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298496869|gb|EFI32163.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 848
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/754 (56%), Positives = 568/754 (75%), Gaps = 22/754 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ E+ EA G GG S L+++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAM 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+
Sbjct: 380 VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDLD-VVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G ++ Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKP---VGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+ D+M+ V +LK+KD+ L +T+ + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDV-DSDGNVTVLNGSSGAP 838
K+L E+ G V VDV + DG + S +P
Sbjct: 788 KILFEEVGPGQVVTVDVYNWDGEGPGEDACSPSP 821
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|145296675|ref|YP_001139496.1| hypothetical protein cgR_2580 [Corynebacterium glutamicum R]
gi|140846595|dbj|BAF55594.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 925
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/759 (55%), Positives = 561/759 (73%), Gaps = 41/759 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMP-------------------------TLEEYGTNLTK 189
+++ G GG S L+++G NLT+
Sbjct: 140 QLLSGYEGGQGGSPEGGQSAPAGGDAVGAGAAPGGRSSSGGPGERSTSLVLDQFGRNLTQ 199
Query: 190 LAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPD 249
A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+
Sbjct: 200 AAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPE 259
Query: 250 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 309
T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEG
Sbjct: 260 TLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEG 319
Query: 310 AIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 369
AIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD T++ILK
Sbjct: 320 AIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDLTVEILK 379
Query: 370 GLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 429
GLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+R++ P
Sbjct: 380 GLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARMRIKRMTAPSS 439
Query: 430 ARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--A 487
RE+++ + + +EK A+ QDFEKA LRD+E L G+E ++ E + +
Sbjct: 440 LREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEERAEKEKQWRS 489
Query: 488 GDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISR 545
GD+ + V E I +++ WTGIPV K++ ES RLL ME+ LHKR+IGQ+EAVKA+SR
Sbjct: 490 GDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEDELHKRIIGQEEAVKAVSR 549
Query: 546 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 605
AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF +R T
Sbjct: 550 AIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDSLIQIDMGEFHDRFT 609
Query: 606 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 665
S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD
Sbjct: 610 ASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDG 669
Query: 666 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFR 724
+GR VDFKNT+LI TSN+G+S I K +GF + + D+ Y+R+K+ V +ELK++FR
Sbjct: 670 QGRIVDFKNTVLIFTSNLGTSDISK-AVGLGFSGSSETDSDAQYDRMKNKVHDELKKHFR 728
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNR+DE++VF QLTK ++ ++ D+++ V + L KD+ +++TE+ ++ + G++P
Sbjct: 729 PEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEKDMSIELTEKAKDLLANRGFDP 788
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 789 VLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 QEVEEIIGQGSQ 72
>gi|376243534|ref|YP_005134386.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae CDCE 8392]
gi|372106776|gb|AEX72838.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae CDCE 8392]
Length = 878
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/778 (54%), Positives = 572/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNDGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +GD+
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGDLED 488
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL MEE LH R+IGQD+AVK++SRAIRR
Sbjct: 489 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHTRIIGQDDAVKSVSRAIRRT 548
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 549 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 608
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 609 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 668
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 669 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLN 727
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 728 RIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 787
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 788 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|305680627|ref|ZP_07403435.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
gi|305660158|gb|EFM49657.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
Length = 890
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/777 (54%), Positives = 565/777 (72%), Gaps = 32/777 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTEAVGA------------------GVGGGSSGNKMPTLEEYGTNLTKLA 191
+++ G+S E G G + L+++G NLT+ A
Sbjct: 140 QLLSGYEGGDSPENTSNDSNDAIGAGAGPGASSSRGSRGAGERSTSLVLDQFGRNLTQAA 199
Query: 192 EEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTI 251
+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T+
Sbjct: 200 KEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETL 259
Query: 252 EGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAI 311
+ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAI
Sbjct: 260 KDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAI 319
Query: 312 DAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 371
DAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ TI ILKGL
Sbjct: 320 DAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVEMTINILKGL 379
Query: 372 RERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR 431
R+RYE HH++ TD AL +AA LS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R
Sbjct: 380 RDRYEAHHRVSITDGALTAAANLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPEGIR 439
Query: 432 ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG 491
E+++ + ++ ++K A+ QDFEKA LRD+E L + + KE E D+
Sbjct: 440 EMDERITKVRRQKEAAIDAQDFEKAAGLRDQERQLTEE-----RREKEKQWRAGELDDIA 494
Query: 492 PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I +++ WTGIPV K++ +ES RLL ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 495 EVGEE-QIAEVLAHWTGIPVFKLTEEESSRLLNMEDELHKRIIGQEDAVKAVSRAIRRTR 553
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 554 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFG 613
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 614 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVD 673
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y R+K+ V +ELK++FRPEFLNR
Sbjct: 674 FKNTVLIFTSNLGTQDISK-AVGMGFSAVGEHDADGQYERMKNKVNDELKKHFRPEFLNR 732
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+D+++VF QLTK ++ E+ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 733 IDDIVVFHQLTKEQIVEMVDLLVGRVEKALAAKDMGIELTEQAKNLLAARGFDPVLGARP 792
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
LRR I R +ED ++EK+L E+ G+ V VDV+ DG+ + ++ PLP
Sbjct: 793 LRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGDAKHNDKATFVFTPRPKPLP 849
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ TE
Sbjct: 61 QEVEEIIGQGTE 72
>gi|225022124|ref|ZP_03711316.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
gi|224945057|gb|EEG26266.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
Length = 890
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/777 (54%), Positives = 565/777 (72%), Gaps = 32/777 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTEAVGA------------------GVGGGSSGNKMPTLEEYGTNLTKLA 191
+++ G+S E G G + L+++G NLT+ A
Sbjct: 140 QLLSGYEGGDSPENTSNDSNDAIGAGAGPGASSSRGSRGAGERSTSLVLDQFGRNLTQAA 199
Query: 192 EEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTI 251
+EGKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T+
Sbjct: 200 KEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETL 259
Query: 252 EGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAI 311
+ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAI
Sbjct: 260 KDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAI 319
Query: 312 DAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 371
DAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ TI ILKGL
Sbjct: 320 DAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVEMTINILKGL 379
Query: 372 RERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR 431
R+RYE HH++ TD AL +AA LS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R
Sbjct: 380 RDRYEAHHRVSITDGALTAAANLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPEGIR 439
Query: 432 ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG 491
E+++ + ++ ++K A+ QDFEKA LRD+E L + + KE E D+
Sbjct: 440 EMDERITKVRRQKEAAIDAQDFEKAAGLRDQERQLTEE-----RREKEKQWRAGELDDIA 494
Query: 492 PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I +++ WTGIPV K++ +ES RLL ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 495 EVGEE-QIAEVLAHWTGIPVFKLTEEESSRLLNMEDELHKRIIGQEDAVKAVSRAIRRTR 553
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 554 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFG 613
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 614 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRIVD 673
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y R+K+ V +ELK++FRPEFLNR
Sbjct: 674 FKNTVLIFTSNLGTQDISK-AVGMGFSAVGEHDADGQYERMKNKVNDELKKHFRPEFLNR 732
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+D+++VF QLTK ++ E+ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 733 IDDIVVFHQLTKEQIVEMVDLLVGRVEKALAAKDMGIELTEQAKNLLAARGFDPVLGARP 792
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
LRR I R +ED ++EK+L E+ G+ V VDV+ DG+ + ++ PLP
Sbjct: 793 LRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGDAKHNDKATFVFTPRPKPLP 849
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ TE
Sbjct: 61 QEVEEIIGQGTE 72
>gi|417969541|ref|ZP_12610480.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
gi|344046258|gb|EGV41924.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
Length = 925
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/762 (55%), Positives = 563/762 (73%), Gaps = 47/762 (6%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT----------------------------LEEYGTN 186
+++ G GG S PT L+++G N
Sbjct: 140 QLLSGYEGGQGGSPEGGQSA---PTGGDAVGAGAAPGGRSSSGGPGERSTSLVLDQFGRN 196
Query: 187 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 246
LT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G
Sbjct: 197 LTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGK 256
Query: 247 VPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 306
VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGA
Sbjct: 257 VPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGA 316
Query: 307 AEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 366
AEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD T++
Sbjct: 317 AEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDLTVE 376
Query: 367 ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 426
ILKGLR+RYE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+R++
Sbjct: 377 ILKGLRDRYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARMRIKRMTA 436
Query: 427 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 486
P RE+++ + + +EK A+ QDFEKA LRD+E L G+E ++ E +
Sbjct: 437 PSSLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEERAEKEKQ 486
Query: 487 --AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 542
+GD+ + V E I +++ WTGIPV K++ ES RLL ME+ LHKR+IGQ+EAVKA
Sbjct: 487 WRSGDLEDIAEVGEEQIAEVLANWTGIPVFKLTEAESSRLLNMEDELHKRIIGQEEAVKA 546
Query: 543 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 602
+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF +
Sbjct: 547 VSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAGFLFGDDDSLIQIDMGEFHD 606
Query: 603 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 662
R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRL
Sbjct: 607 RFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRL 666
Query: 663 TDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQ 721
TD +GR VDFKNT+LI TSN+G+S I K +GF + + D+ Y+R+K+ V +ELK+
Sbjct: 667 TDGQGRIVDFKNTVLIFTSNLGTSDISK-AVGLGFSGSSETDSDAQYDRMKNKVHDELKK 725
Query: 722 YFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEG 781
+FRPEFLNR+DE++VF QLTK ++ ++ D+++ V + L KD+ +++TE+ ++ + G
Sbjct: 726 HFRPEFLNRIDEIVVFHQLTKDQIVQMVDLLIGRVSNALAEKDMSIELTEKAKDLLANRG 785
Query: 782 YNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
++P GARPLRR I R +ED M+EK+L EI G+ V VDV+
Sbjct: 786 FDPVLGARPLRRTIQREIEDQMSEKILFGEIGAGEIVTVDVE 827
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 QEVEEIIGQGSQ 72
>gi|145222022|ref|YP_001132700.1| ATPase [Mycobacterium gilvum PYR-GCK]
gi|145214508|gb|ABP43912.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK]
Length = 847
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/739 (57%), Positives = 566/739 (76%), Gaps = 21/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGA+ + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139
Query: 155 RMV----GESTEAVGAGVGGGSSGNKMPTL--EEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ G T G G GG +GN +L +++G NLT A EGKLDPV+GR+ +IER
Sbjct: 140 QLLSGYQGRETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIER 199
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G LVAG+
Sbjct: 200 VMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETLKDKQLYTLDLGSLVAGS 259
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ
Sbjct: 260 RYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQT 319
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEYRK+IEKD ALERRFQPV+V EP+V TI+ILKGLR+RYE HH++ TD A+
Sbjct: 320 IGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILKGLRDRYEAHHRVSITDGAI 379
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ +EK A+
Sbjct: 380 AAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAI 439
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFEKA LRD+E L AQ + + + +GD+ VV EVD I ++
Sbjct: 440 DAQDFEKAASLRDKEKQLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGN 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFI
Sbjct: 491 WTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDFKNT+LI TSN+G+
Sbjct: 611 TEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
S I K +G +++Y R+K V +ELK++FRPEFLNR+D++IVF QLT+ E+
Sbjct: 671 SDISKA---VGLGFTQGGGENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQDEI 727
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++ D+M+ V ++LK KD+ +++T + + + + G++P GARPLRR I R +ED ++E
Sbjct: 728 IQMVDLMIGRVGNQLKAKDMAMELTPKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSE 787
Query: 806 KMLAREIKEGDSVIVDVDS 824
K+L E+ G V VDV++
Sbjct: 788 KILFEELGPGQLVTVDVEN 806
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 59/73 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +A
Sbjct: 61 SQVEEIIGQGQQA 73
>gi|397654739|ref|YP_006495422.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
gi|393403695|dbj|BAM28187.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
Length = 885
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/777 (54%), Positives = 568/777 (73%), Gaps = 35/777 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYTRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVGRVSKALAQKDMGIELTEKAKSLLAGRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
LRR I R +ED+++EK+L E+ G+ V VDV+ DG + ++ PLP
Sbjct: 790 LRRTIQREIEDALSEKILFGEVGAGEIVTVDVEGWDGESKETDKATFTFAPRPKPLP 846
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|229816837|ref|ZP_04447119.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785853|gb|EEP21967.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 881
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/741 (55%), Positives = 562/741 (75%), Gaps = 19/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + + +R+ I
Sbjct: 80 FTSHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVNLGELRSATI 139
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
M+ GE A G SG+ + L+++G NLT A GKLDPV+GR +
Sbjct: 140 DMIRGNAGGDEKGELANAGGVADKTNKSGSAI--LDQFGRNLTAEAAAGKLDPVIGRTQE 197
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLA++I +GDVP+T++GK+V +LD+G +V
Sbjct: 198 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAEKINAGDVPETLKGKQVYSLDLGSMV 257
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 258 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 317
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLRERYE HH++ TD
Sbjct: 318 LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHRVTITD 377
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+ +AA+LS +YI DR LPDKAIDLIDEAG+R+R++ +P E +ELE ++ +++ EK
Sbjct: 378 SAIQAAAELSSRYIQDRRLPDKAIDLIDEAGARLRIKRLTMPPELKELEAKVAKLSAEKE 437
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
+AV+ QDFEKA ++RD DL+ + L D+ K + ET D VV E I +VS+
Sbjct: 438 QAVKDQDFEKAADMRD---DLEKLQTELKDRQKAWHEGET---DAKMVVDEDVIAEVVSS 491
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL ME LHKR+IGQDEAV A++R+IRR RVGLK+P RP SFI
Sbjct: 492 TTGIPVVKLTQAESKKLLNMEAELHKRIIGQDEAVSALARSIRRTRVGLKDPKRPAGSFI 551
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGY+GY EGG+L
Sbjct: 552 FAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYIGYEEGGEL 611
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 612 TEKVRRKPFSVVLFDEIEKAHPDIFNSLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 671
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLTK EV
Sbjct: 672 RDIAKAA-NTGFNLGTN-TESSYQRMKEQVSSELKQQFRPEFLNRLDDIIVFKQLTKPEV 729
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K++ DRL + + L +T+ ++ + ++G++P GARPLRR I R +ED+++E
Sbjct: 730 RQIVDLDVKKLDDRLFDRHMSLDLTDEAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISE 789
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L E+ +G+ V VD + +G
Sbjct: 790 KILMGELTDGEHVKVDAEGEG 810
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 9/88 (10%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELEATR 60
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNKMP 178
QVI M+G+ G SS +P
Sbjct: 61 KQVIEMIGK---------GNASSNGHIP 79
>gi|375289379|ref|YP_005123920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371576668|gb|AEX40271.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 885
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/753 (54%), Positives = 562/753 (74%), Gaps = 34/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMVG--------ESTEAVGAGV-------------GGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ E+ E+ G V G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGRESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPV+GR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYSRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VFRQLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFRQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 790 LRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|313893296|ref|ZP_07826871.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442192|gb|EFR60609.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 158 str. F0412]
Length = 815
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/762 (52%), Positives = 562/762 (73%), Gaps = 32/762 (4%)
Query: 85 GFVVKAMFE-------RFTEKAIKVIM---------LAQEEARRLGHNYIGSEHLLLGLL 128
G V + +FE R +KA + M LA + A R+ HNY+G+EH+LLGLL
Sbjct: 53 GIVTENIFEAVEDHVGRGNKKATSIYMTPRVKYILELAVQMANRMNHNYVGTEHILLGLL 112
Query: 129 REGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLT 188
+G GVAA +L+++ +++ + ++G +++ G G + ++ L ++ T+L
Sbjct: 113 SDGSGVAAAILQSMDVRTNDVVDAIRNILGSNSKGHNDGQEGPNGDGELGDLSDFATDLN 172
Query: 189 KLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVP 248
+ A++GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP
Sbjct: 173 EYAKQGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVP 232
Query: 249 DTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAE 308
+ + K++I+L +G ++AG KYRGEFEERLKK ++E++Q D++I+FIDE+HTL+GAGA E
Sbjct: 233 EILRNKRIISLSIGAMLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATE 292
Query: 309 GAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQIL 368
GA+DAANILKP+LARGE Q IGATTLDEY+KHIEKD ALERRFQPV+V EP+ ++ ++IL
Sbjct: 293 GAMDAANILKPALARGEFQVIGATTLDEYKKHIEKDAALERRFQPVQVGEPNEEDALEIL 352
Query: 369 KGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPE 428
KGLR+RYE HK + TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR++
Sbjct: 353 KGLRDRYEAFHKAKITDEALKAAVSLSSRYITDRFLPDKAIDVVDEAASKVRMQVFSTAP 412
Query: 429 EARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG 488
+ + LE+ L+ + EK AV QDFEKA +LRD E L IS + A E
Sbjct: 413 DVKALEERLKVVKNEKEAAVTSQDFEKAAKLRDEEKTLVKDIS-------DKKSAAKEES 465
Query: 489 DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIR 548
D VVTE DI +V+ WTGIPV K++ ES+ LL +E+ LHKRV+GQD+AV A+++A+R
Sbjct: 466 DQKLVVTEDDIAAVVAQWTGIPVAKIAEAESETLLHLEKELHKRVVGQDDAVTAVAKAVR 525
Query: 549 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 608
RAR GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+
Sbjct: 526 RARAGLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDESAMIRLDMSEYMEKHTVSR 585
Query: 609 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 668
L+G+PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D FN++LQ+L+DGRLTDS+GR
Sbjct: 586 LVGAPPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGR 645
Query: 669 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL--------VTEELK 720
TVDF+NT++IMTSN+G+ + K +GF L + +SS N+ S+ V + +K
Sbjct: 646 TVDFRNTVIIMTSNLGAKALHKNSPELGF-LAPKKSESSINQSNSIDFKEAKKSVMDAVK 704
Query: 721 QYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEE 780
++FRPEFLNR+DEMIVF+ LT+ ++++I I++ +V RLK ++++L++T + +V+E
Sbjct: 705 RHFRPEFLNRIDEMIVFQPLTEEDLQQIVSILMSDVTKRLKERELQLEITAEAMQLLVKE 764
Query: 781 GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 822
G + + GARPL+RAI RL+ED +++ +L + EG ++ DV
Sbjct: 765 GSDFTMGARPLKRAIQRLIEDPVSDLILKGDATEGKTIKADV 806
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M +RFT+ KV+ LAQE A LGH+Y+G+EH+L+GL + VAA+ LE LG NI
Sbjct: 1 MMQRFTDDTQKVLSLAQEAALELGHDYVGTEHVLIGLTKVKNSVAAKALEELGIVTENIF 60
Query: 151 TQVIRMVG 158
V VG
Sbjct: 61 EAVEDHVG 68
>gi|423349871|ref|ZP_17327526.1| hypothetical protein HMPREF9156_01064 [Scardovia wiggsiae F0424]
gi|393702363|gb|EJD64569.1| hypothetical protein HMPREF9156_01064 [Scardovia wiggsiae F0424]
Length = 894
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/784 (53%), Positives = 584/784 (74%), Gaps = 39/784 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EHLLLGL+REGEGV +VL +G D S++R+ VI
Sbjct: 80 FTPHARQVVELSLREALQLGHSYIGTEHLLLGLIREGEGVGTQVLIKMGVDVSDLRSSVI 139
Query: 155 ---RMVGEST---EAVGAGVGGGSSG-NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
R G S+ + V AG G SG N L+++G NLT A +GKLDPV+GR +IE
Sbjct: 140 NAIRDTGTSSSNDDMVNAGGMGDQSGKNGSSLLDQFGRNLTAEAGDGKLDPVIGRSNEIE 199
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V LD+G ++AG
Sbjct: 200 RVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGDVPETLKGKQVYALDLGSMIAG 259
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ
Sbjct: 260 SRYRGDFEERLKKVLKEIRTRGDIVLFIDEIHTIVGAGSADGAMGASDMLKPMLARGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TDEA
Sbjct: 320 TIGATTTDEYRKYIEKDAALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDEA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A
Sbjct: 380 IQSAAELSARYIQDRNLPDKAIDLIDEAGARLRIKRLTAPSALKELDIKVEKVKSDKDKA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFEKA LRD + L+ + K KE S E E+ DV VV E I +++S+ T
Sbjct: 440 IADQDFEKAASLRDAQEKLEQE-----RKDKEKSWREGES-DVSMVVDEDTIANVISSST 493
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ ES +LL ME LHKRVIGQDEAV+A+SR+IRR RVGLK+P RP SFIF+
Sbjct: 494 GIPVFKLTETESKKLLNMESELHKRVIGQDEAVEALSRSIRRTRVGLKDPKRPSGSFIFA 553
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAK LA Y F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE
Sbjct: 554 GPTGVGKTELAKTLAEYLFDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTE 613
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G+S
Sbjct: 614 KVRRKPFSVILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTSK 673
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I + + GF++ + D+SY R+K V ELK FRPEFLNRLD++IVFRQLT+ EV++
Sbjct: 674 ISQ-AQSTGFNIGGN-TDTSYQRMKDQVQSELKGQFRPEFLNRLDDIIVFRQLTEPEVRQ 731
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I ++ ++ + DRL + + +++T ++ + ++G++P GARPL+R I R +ED+++EK+
Sbjct: 732 IVELDVRTLNDRLFERHMSVELTGAAKDLLAQKGFDPLLGARPLQRVIQRDVEDAISEKI 791
Query: 808 LAREIKEGDSVIVDVDSDG------------NVTVLNGS-----------SGAPES-LAD 843
L ++KE + ++VD + +G + +V NG +G+PE A+
Sbjct: 792 LLGDLKENEQIVVDAEGEGILGEFTFTSRPFDFSVGNGGGIPAADSGDTEAGSPEGPSAE 851
Query: 844 PLPV 847
P+PV
Sbjct: 852 PVPV 855
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALKHNYIGTEHLLLGLIREGEGVAAKALAAKGVELDAAR 60
Query: 151 TQVIRMVGEST 161
+Q+ M+G+ +
Sbjct: 61 SQIEEMIGKGS 71
>gi|288574596|ref|ZP_06392953.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570337|gb|EFC91894.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 824
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/738 (54%), Positives = 556/738 (75%), Gaps = 24/738 (3%)
Query: 87 VVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP 146
+ K M + +A +V+ L+ EAR +G NY+G+EH+LLGL EGEG+A +VL N+G +P
Sbjct: 73 IKKPMDLPLSPRAKRVLDLSIREARNMGVNYVGTEHILLGLFSEGEGMAVQVLRNMGLEP 132
Query: 147 SNIRTQVIRMVGESTEAVGAGVGGGSSGNKM--------PTLEEYGTNLTKLAEEGKLDP 198
+ + QV+R + G G G S NK P L++ G +LT++AE+ +LDP
Sbjct: 133 AEGKKQVLRFLS-------GGEGDGKSSNKQERKDRNRTPILDQLGIDLTEMAEKNELDP 185
Query: 199 VVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVIT 258
V+GR +I RV+Q+L RRTKNNP LIG+PGVGKTAI EGLAQ++ SGD+P++++ K+V
Sbjct: 186 VIGRSKEIRRVIQVLSRRTKNNPVLIGDPGVGKTAIVEGLAQKVLSGDIPESLKEKRVFQ 245
Query: 259 LDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILK 318
L+MG LVAGTKYRGEFEER++KL+ E+K+ ++ILFIDE+HT++GAG AEGAIDAANILK
Sbjct: 246 LNMGNLVAGTKYRGEFEERMRKLVVELKECRDVILFIDEIHTIVGAGGAEGAIDAANILK 305
Query: 319 PSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 378
PSLARGE Q +GATTL+EYR+HIEKD ALERRFQPVKV EP++++ I+KGLR+RYE H
Sbjct: 306 PSLARGEFQVVGATTLEEYRRHIEKDAALERRFQPVKVYEPNLEDAFLIVKGLRDRYESH 365
Query: 379 HKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELR 438
H++ TD+AL +A +LS +YI+DRFLPDK IDLIDEA +R RL +LPE ++++KEL
Sbjct: 366 HRVTITDQALDAAVKLSSRYITDRFLPDKGIDLIDEAAARARLDTMELPESLKKMDKELE 425
Query: 439 QITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD 498
+I KEK AV Q FEKA +LRD E L + + +E +T+ PV+T+
Sbjct: 426 RIRKEKESAVNSQAFEKAAKLRDDENRLSDDLER---RRREWVSRQTKE---VPVLTDES 479
Query: 499 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPN 558
+ +VS WTG+PV +++ +ES RL +ME+ +H+R++GQ+ AV A+S+AIRRAR GLK+P
Sbjct: 480 VAQVVSEWTGVPVSQLTEEESKRLSRMEDEIHRRLVGQESAVSAVSKAIRRARSGLKDPK 539
Query: 559 RPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVG 618
RPI SF+F GPTGVGK+E+A++LA + FGSE+A++ LDMSEFMERH VSKLIG+PPGYVG
Sbjct: 540 RPIGSFLFLGPTGVGKTEMARSLADFLFGSEDALVTLDMSEFMERHEVSKLIGAPPGYVG 599
Query: 619 YTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLI 678
+ GG+LTE +RRRPY+V+LFDEIEKA+PDVFN++LQILE+GRLTD +GR VDF+NT++I
Sbjct: 600 HESGGKLTETIRRRPYSVILFDEIEKANPDVFNVLLQILEEGRLTDGQGRKVDFRNTVVI 659
Query: 679 MTSNVGS-SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
MTSN+G+ +++++ G GF D E S ++ + + EE+++ FRPEFLNR+DE +VF
Sbjct: 660 MTSNIGARNIVKRQG--FGFATDNHEGFSDWSSVSKNIDEEVRRAFRPEFLNRIDEQVVF 717
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
L+K ++ I D+MLKEV +RL K I L V+ + +E ++E+GY P YGARPLRR I R
Sbjct: 718 SPLSKEQMLGILDVMLKEVRERLSEKGIRLTVSTKAKELILEKGYQPQYGARPLRRTIQR 777
Query: 798 LLEDSMAEKMLAREIKEG 815
LLED +A+ +L + +G
Sbjct: 778 LLEDPLADMILDGSLIDG 795
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
M++ FTE++ KVI LA EA RLGH+ IG+EH+L+GL E GVAA++L +LG PS+
Sbjct: 1 MWQFFTERSKKVIQLAHREALRLGHDMIGTEHILMGLALENGGVAAQILSSLGL-PSD 57
>gi|379716065|ref|YP_005304402.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|387139348|ref|YP_005695327.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387141325|ref|YP_005697303.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389851114|ref|YP_006353349.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
gi|349735826|gb|AEQ07304.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355393116|gb|AER69781.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377654771|gb|AFB73120.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|388248420|gb|AFK17411.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
Length = 885
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/753 (55%), Positives = 561/753 (74%), Gaps = 34/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL +GAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKIGADLPRVRQQVI 139
Query: 155 RMV-----GESTE----------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ GES E G G G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGGESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYSRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 790 LRRTIQREVEDALSEKILFGEVGAGEIVTVDVE 822
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|50952128|gb|AAT89829.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 839
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/735 (56%), Positives = 554/735 (75%), Gaps = 22/735 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVI 139
Query: 155 RMVG-----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ E + G +G+++ L+++G NLT+ A + KLDPV+GR+ +IERV
Sbjct: 140 QLLSGYQGKEQVQVGGNDQATAQAGSQI--LDQFGRNLTQAARDNKLDPVIGREKEIERV 197
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RR+KNNP LIGEPGVGKTA+ EGLAQ I GDVP+T++ K++ TLD+G L+AG++
Sbjct: 198 MQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLKDKQLYTLDLGSLIAGSR 257
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLKK+ +EI+ +II FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ I
Sbjct: 258 YRGDFEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTI 317
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKH EKD ALERRFQP++V EPS+ TI ILKGLR+RYE HHK+ TD A+V
Sbjct: 318 GATTLDEYRKHFEKDAALERRFQPIQVNEPSLPHTINILKGLRDRYEAHHKVSITDGAIV 377
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+RL P E R+ + ++ + +K A+
Sbjct: 378 SAANLADRYIQDRFLPDKAIDLIDEAGARLRLSILSAPPELRKFDDKIAVVRSQKEAAIE 437
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAW 506
QDFEKA LRD E +L + L + + +GDV EVD I +++
Sbjct: 438 DQDFEKAASLRDEEKNLLGERLRL--------EKQWRSGDV-KTTAEVDEGLIAEVLAQA 488
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ +ES RL+ ME+ LH+RVIGQ+EA+ A+S+ IRR R GLK+P RP SFIF
Sbjct: 489 TGIPVFKLTEEESARLVFMEKALHQRVIGQEEAIAALSKTIRRTRAGLKDPKRPSGSFIF 548
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + F E AMI LDMSE+ E+HTVS+L G+PPG+VG+ +GGQLT
Sbjct: 549 AGPTGVGKTELAKALAEFLFDDETAMISLDMSEYGEKHTVSRLFGAPPGFVGFEDGGQLT 608
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR VDFKNT++IMT+N+G+
Sbjct: 609 EKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNLGTK 668
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I G +GF ++ D + Y+R++ V EELK+ F+PEFLNR+DE+IVF QL+K E+
Sbjct: 669 DI--SGAPVGFQIEGDPT-TGYDRMRGKVYEELKKNFKPEFLNRVDEIIVFPQLSKPELL 725
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
+I D+ +K + DRL +D+ +++ +ER++E G++P+ GARPLRRA+ +ED ++EK
Sbjct: 726 QIVDLFIKRLSDRLLDRDMTIELEIAAKERLIEVGFDPTLGARPLRRAVQHEIEDRLSEK 785
Query: 807 MLAREIKEGDSVIVD 821
+L E+ GD V VD
Sbjct: 786 ILHGELSAGDHVHVD 800
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR 60
Query: 151 TQV 153
QV
Sbjct: 61 EQV 63
>gi|376291130|ref|YP_005163377.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|372104526|gb|AEX68123.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
Length = 878
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/778 (54%), Positives = 573/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNDGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +G++
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGNLED 488
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL ME+ LHKR+IGQD+AVK++SRAIRR
Sbjct: 489 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEDELHKRIIGQDDAVKSVSRAIRRT 548
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 549 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 608
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 609 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 668
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 669 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLN 727
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QLT+ ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 728 RIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 787
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 788 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|422489253|ref|ZP_16565580.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL020PA1]
gi|328758387|gb|EGF72003.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL020PA1]
Length = 844
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/740 (55%), Positives = 557/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+
Sbjct: 380 SAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAARLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++
Sbjct: 672 ISK-SVNLGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ DRL KD+ ++VT +E + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVGQLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD +G+
Sbjct: 790 LFGEVKPGQIVVVDAAPEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|375293788|ref|YP_005128328.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae INCA 402]
gi|371583460|gb|AEX47126.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae INCA 402]
Length = 878
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/778 (54%), Positives = 572/778 (73%), Gaps = 38/778 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMV-----GESTE---------------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
+++ GES E G G G G N + L+++G NLT+ A+EG
Sbjct: 140 QLLSGYEGGESPENNNDGEAVGAGTGAGRAGRGGGAGERSNSL-VLDQFGRNLTQAAKEG 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K
Sbjct: 199 KLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKDK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA
Sbjct: 259 QVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSVD TI+ILKGLR+R
Sbjct: 319 SLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDR 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+++
Sbjct: 379 YEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVD 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AGDVGP 492
++ ++ +EK A+ QDFEKA LRD E L G+E ++ E + +GD+
Sbjct: 439 DQIAEVRREKEAAIDAQDFEKAAGLRDTERKL----------GEERAEKEKQWRSGDLED 488
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
+ V E I ++ WTGIPV K++ +ES RLL MEE LH+R+IGQD+AVK++SRAIRR
Sbjct: 489 IAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHRRIIGQDDAVKSVSRAIRRT 548
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FG ++A+I++DM EF +R T S+L
Sbjct: 549 RAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLF 608
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 609 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 668
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLN
Sbjct: 669 DFKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYDRMKQKVNDELKKHFRPEFLN 727
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF QL + ++ E+ D+++ V L KD+ +++TE+ + + + G++P GAR
Sbjct: 728 RIDEIVVFHQLAQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGAR 787
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
PLRR I R +ED ++EK+L E+ G+ V VDV+ DG + +S PLP
Sbjct: 788 PLRRTIQREIEDVLSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLP 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|392959702|ref|ZP_10325183.1| ATPase AAA-2 domain protein [Pelosinus fermentans DSM 17108]
gi|421056369|ref|ZP_15519287.1| ATPase AAA-2 domain protein [Pelosinus fermentans B4]
gi|421058700|ref|ZP_15521366.1| ATPase AAA-2 domain protein [Pelosinus fermentans B3]
gi|421065887|ref|ZP_15527574.1| ATPase AAA-2 domain protein [Pelosinus fermentans A12]
gi|421070056|ref|ZP_15531193.1| ATPase AAA-2 domain protein [Pelosinus fermentans A11]
gi|392438207|gb|EIW16065.1| ATPase AAA-2 domain protein [Pelosinus fermentans B4]
gi|392448794|gb|EIW25971.1| ATPase AAA-2 domain protein [Pelosinus fermentans A11]
gi|392456086|gb|EIW32845.1| ATPase AAA-2 domain protein [Pelosinus fermentans DSM 17108]
gi|392457903|gb|EIW34503.1| ATPase AAA-2 domain protein [Pelosinus fermentans A12]
gi|392460300|gb|EIW36618.1| ATPase AAA-2 domain protein [Pelosinus fermentans B3]
Length = 813
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/741 (58%), Positives = 567/741 (76%), Gaps = 12/741 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A + I LA A LGHNY+G+EHLLLGLL+EGEGVAA++L+ L D + +V
Sbjct: 79 YTPRAKRCIELAINVAADLGHNYVGTEHLLLGLLQEGEGVAAQLLDGLDVDVQVLSQKVS 138
Query: 155 RMVG----ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
++ A GG + PTLEE+G +L KLA EGK+DPV+GR +IERV+
Sbjct: 139 ELLSGFSASGQGAQQQQSGGKQVSSNTPTLEEFGRDLNKLAREGKIDPVIGRGAEIERVL 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI +VPD + K++I+L+M LVAG+KY
Sbjct: 199 QILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQNNVPDILGVKRIISLNMASLVAGSKY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK++EE++Q +ILFIDE+HTLIGAGAAEGAIDAANILKP+LARGE+Q IG
Sbjct: 259 RGDFEERLKKVLEEVRQDGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGEIQVIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EY+K+IEKD ALERRFQP+ V EPSV++ I IL+G+R++YE H++ TDEA+ +
Sbjct: 319 ATTLNEYKKYIEKDAALERRFQPITVSEPSVEDAITILQGVRDKYEAFHRISITDEAIEA 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A LS++YISDRFLPDKAIDL+DEA +RVRL+ P +ELEK L+Q+ EK A+
Sbjct: 379 AVTLSHRYISDRFLPDKAIDLMDEAAARVRLKTFSSPSNVKELEKTLKQLQTEKEAAIAA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
Q++E+A LRD E LK ++ + K KE + G+ VVT +I HIV+ WTGIP
Sbjct: 439 QEYEQAAHLRDEEKRLKNELES---KQKEWK----QQGNEQLVVTGEEIAHIVAVWTGIP 491
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
VEK++ +E+ RLL +EE LHKRVIGQ+EAVK+++RA+RRAR GLK+P RPI SFIF GPT
Sbjct: 492 VEKLAQEEAVRLLNLEEELHKRVIGQNEAVKSVARAVRRARAGLKDPKRPIGSFIFLGPT 551
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+ELAKALAA F E +MIRLDMSE+ME+HTVS+LIG+PPGYVGY EGGQLT+AVR
Sbjct: 552 GVGKTELAKALAATLFNDESSMIRLDMSEYMEKHTVSRLIGAPPGYVGYDEGGQLTDAVR 611
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+PY V+L DEIEKAH DVFN++LQ+LEDGRLTDS+GR VDFKNT++IMTSNVG+ + +
Sbjct: 612 RKPYAVILLDEIEKAHYDVFNILLQVLEDGRLTDSQGRKVDFKNTVIIMTSNVGAKHLRR 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+GF D D+ ++ K+ V EE+K+ FRPEF+NR+DEMIVF LT E+ I D
Sbjct: 672 DNTMLGFLAD-DKMNNEAENAKNRVMEEVKRTFRPEFINRVDEMIVFGSLTDTELTSIVD 730
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
IMLK+V RL+ + L+ +++ + +V+EG + +YGARPLRRAI +L+ED +AE ML
Sbjct: 731 IMLKDVGKRLEDNTLYLECSDKAKAELVKEGRDYAYGARPLRRAIQKLVEDEIAELMLRH 790
Query: 811 EIKEGDSVIVDVDSDGNVTVL 831
++ +GD+V++DVD+DG V ++
Sbjct: 791 QVIKGDTVLIDVDADGKVKLM 811
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M RFTE+A K + A +EA LGH+YIG+EHLLLGLL E EG+AA+ L ++ +R
Sbjct: 1 MLGRFTERAQKALHFAHQEAIGLGHDYIGTEHLLLGLLHESEGIAAKGLLSVNISIETVR 60
Query: 151 TQVIRMVG 158
+V ++VG
Sbjct: 61 MEVEKLVG 68
>gi|282853334|ref|ZP_06262671.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J139]
gi|386070819|ref|YP_005985715.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes ATCC 11828]
gi|422389730|ref|ZP_16469827.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL103PA1]
gi|422458087|ref|ZP_16534745.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA2]
gi|422463757|ref|ZP_16540370.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL060PA1]
gi|422466893|ref|ZP_16543455.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA4]
gi|422566068|ref|ZP_16641707.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA2]
gi|422576859|ref|ZP_16652396.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL001PA1]
gi|282582787|gb|EFB88167.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J139]
gi|314922364|gb|EFS86195.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL001PA1]
gi|314965312|gb|EFT09411.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA2]
gi|315091112|gb|EFT63088.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA4]
gi|315094198|gb|EFT66174.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL060PA1]
gi|315104854|gb|EFT76830.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA2]
gi|327329257|gb|EGE71017.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL103PA1]
gi|353455185|gb|AER05704.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes ATCC 11828]
Length = 844
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/740 (55%), Positives = 558/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+
Sbjct: 380 SAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAAGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++
Sbjct: 672 ISK-SVNLGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ DRL KD+ ++VT +E + + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVGQLEDRLADKDMGIEVTPAAKELLSKRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD +G+
Sbjct: 790 LFGEVKPGQIVVVDAAPEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|294791481|ref|ZP_06756638.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Scardovia
inopinata F0304]
gi|294457952|gb|EFG26306.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Scardovia
inopinata F0304]
Length = 882
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/774 (53%), Positives = 577/774 (74%), Gaps = 29/774 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL +G D +++RT VI
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHVLLGLIREGEGVGTQVLVKMGVDVADLRTSVI 139
Query: 155 RMVGESTEAV-------GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+ +++ G+ S+ + L+++G NLT+ A EGKLDPV+GR +IE
Sbjct: 140 DAIRDTSADASKNDMTNAGGITDKSAKSGSSLLDQFGRNLTEEAREGKLDPVIGRSNEIE 199
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+ IL RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++ K+V LD+G ++AG
Sbjct: 200 RVMVILSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGDVPETLKDKQVYALDLGSMIAG 259
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+ +EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ
Sbjct: 260 SRYRGDFEERLKKVFKEIKTRGDIVLFIDEIHTIVGAGSADGAMGASDMLKPLLARGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TD A
Sbjct: 320 TIGATTTDEYRKYIEKDAALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDAA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A
Sbjct: 380 IQSAAELSARYIQDRNLPDKAIDLIDEAGARLRIKRLTAPSALKELDVKVAKVKADKDKA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFEKA LRD + L+ + K KE S E E+ DV VV E I H++S+ T
Sbjct: 440 IADQDFEKAASLRDAQEKLEQE-----RKDKEKSWREGES-DVSMVVDEDTIAHVISSAT 493
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ ES +LL ME LHKRVIGQDEAV+A+SR+IRRARVGLK+P RP SFIF+
Sbjct: 494 GIPVFKLTETESKKLLNMEAELHKRVIGQDEAVEALSRSIRRARVGLKDPKRPSGSFIFA 553
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA Y F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE
Sbjct: 554 GPTGVGKTELAKALAEYLFDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTE 613
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G++
Sbjct: 614 KVRRKPFSVILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTNK 673
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I + + GF+L + ++SY R+K V ELK+ FRPEFLNRLD++IVF+QLT+ +V++
Sbjct: 674 IAQ-SQSTGFNLGGN-TETSYQRMKDQVQSELKEQFRPEFLNRLDDIIVFKQLTESQVRQ 731
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I ++ +K + DRL + + +++T+ ++ + E+G++P GARPLRR I R +ED+++E++
Sbjct: 732 IVELDVKALNDRLFERHMSMELTDAAKDLLAEKGFDPLLGARPLRRVIQRDIEDAISEEI 791
Query: 808 LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE--------------SLADPLPV 847
L +I+E + ++V+ + +G + SS E A+PLPV
Sbjct: 792 LMGKIRENEQIVVNAEGEGILGEFTFSSHPYEVGGPDGDGTDGDSAQAAEPLPV 845
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLKHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ + A
Sbjct: 61 QQVEEMIGKGSAA 73
>gi|300859188|ref|YP_003784171.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|384505360|ref|YP_005682030.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
gi|300686642|gb|ADK29564.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|302331444|gb|ADL21638.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
Length = 885
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/753 (54%), Positives = 561/753 (74%), Gaps = 34/753 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMVG--------ESTEAVGAGV-------------GGGSSGNKMPTLEEYGTNLTKLAEE 193
+++ E+ E+ G V G G N + L+++G NLT+ A++
Sbjct: 140 QLLSGYEGRESPENNESGGEAVGAGTGAARAGRGSGAGDRSNSL-VLDQFGRNLTQAAKD 198
Query: 194 GKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEG 253
GKLDPV+GR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++
Sbjct: 199 GKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETLKD 258
Query: 254 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 313
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDA
Sbjct: 259 KQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA 318
Query: 314 ANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRE 373
A++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV+ TI+ILKGLR+
Sbjct: 319 ASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRD 378
Query: 374 RYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAREL 433
RYE HH++ TD AL +AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R++
Sbjct: 379 RYEAHHRVSITDGALAAAAQLSDRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKV 438
Query: 434 EKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 493
+ + ++ +EK A+ QDFEKA LRD E L + + + + +GD+ +
Sbjct: 439 DDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEE--------RAEKEKQWRSGDLEEI 490
Query: 494 --VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRAR 551
V E I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AVKA+SRAIRR R
Sbjct: 491 AEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTR 550
Query: 552 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 611
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G
Sbjct: 551 AGLKDPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 610
Query: 612 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 671
+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VD
Sbjct: 611 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQGRVVD 670
Query: 672 FKNTLLIMTSNVGSSVIEKGGRRIGF-DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 730
FKNT+LI TSN+G+ I K +GF + + D Y+R+K V +ELK++FRPEFLNR
Sbjct: 671 FKNTVLIFTSNLGTQDISK-AVGMGFSSVGEHDADGQYSRMKQKVNDELKKHFRPEFLNR 729
Query: 731 LDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARP 790
+DE++VF QLT+ ++ ++ D+++ V L KD+ +++TE+ + + G++P GARP
Sbjct: 730 IDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARP 789
Query: 791 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
LRR I R +ED+++EK+L E+ G+ V VDV+
Sbjct: 790 LRRTIQREIEDALSEKILFGEVGAGEIVTVDVE 822
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G +E
Sbjct: 61 QEVEEIIGHGSE 72
>gi|50841767|ref|YP_054994.1| Clp family ATP-binding protease [Propionibacterium acnes KPA171202]
gi|289424196|ref|ZP_06425979.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK187]
gi|289428978|ref|ZP_06430658.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J165]
gi|295129846|ref|YP_003580509.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK137]
gi|335050407|ref|ZP_08543373.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 409-HC1]
gi|335054183|ref|ZP_08547003.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 434-HC2]
gi|342212083|ref|ZP_08704808.1| Clp amino terminal domain protein [Propionibacterium sp. CC003-HC2]
gi|354606251|ref|ZP_09024222.1| ATP-dependent Clp protease ATP-binding subunit [Propionibacterium
sp. 5_U_42AFAA]
gi|365961999|ref|YP_004943565.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365964241|ref|YP_004945806.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365973180|ref|YP_004954739.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn33]
gi|386023229|ref|YP_005941532.1| putative ATP-dependent Clp protease ATP-binding subunit
[Propionibacterium acnes 266]
gi|387502650|ref|YP_005943879.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes 6609]
gi|407934659|ref|YP_006850301.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes C1]
gi|417931045|ref|ZP_12574418.1| Clp amino terminal domain protein [Propionibacterium acnes SK182]
gi|419420498|ref|ZP_13960727.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes PRP-38]
gi|422384263|ref|ZP_16464404.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA3]
gi|422387113|ref|ZP_16467230.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA2]
gi|422391910|ref|ZP_16471984.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL099PA1]
gi|422394956|ref|ZP_16474997.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL097PA1]
gi|422425099|ref|ZP_16502045.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA1]
gi|422427037|ref|ZP_16503955.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA1]
gi|422429131|ref|ZP_16506036.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA2]
gi|422432061|ref|ZP_16508931.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA2]
gi|422434917|ref|ZP_16511775.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA2]
gi|422436826|ref|ZP_16513673.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL092PA1]
gi|422442639|ref|ZP_16519442.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA1]
gi|422446431|ref|ZP_16523176.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA1]
gi|422447675|ref|ZP_16524407.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA3]
gi|422450219|ref|ZP_16526936.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA2]
gi|422453070|ref|ZP_16529766.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA3]
gi|422456626|ref|ZP_16533290.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA1]
gi|422460620|ref|ZP_16537254.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL038PA1]
gi|422474118|ref|ZP_16550588.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL056PA1]
gi|422476581|ref|ZP_16553020.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL007PA1]
gi|422479506|ref|ZP_16555916.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA1]
gi|422481731|ref|ZP_16558130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA1]
gi|422484002|ref|ZP_16560381.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA2]
gi|422487811|ref|ZP_16564142.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA2]
gi|422491570|ref|ZP_16567881.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL086PA1]
gi|422494356|ref|ZP_16570651.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA1]
gi|422497810|ref|ZP_16574083.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA3]
gi|422500239|ref|ZP_16576495.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA2]
gi|422504740|ref|ZP_16580974.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA2]
gi|422509213|ref|ZP_16585371.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA2]
gi|422511361|ref|ZP_16587504.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA1]
gi|422514198|ref|ZP_16590319.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA2]
gi|422515417|ref|ZP_16591529.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA2]
gi|422517986|ref|ZP_16594058.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL074PA1]
gi|422520633|ref|ZP_16596675.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL045PA1]
gi|422523564|ref|ZP_16599576.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA2]
gi|422526127|ref|ZP_16602126.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA1]
gi|422531493|ref|ZP_16607441.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA1]
gi|422535148|ref|ZP_16611071.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA1]
gi|422536019|ref|ZP_16611927.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL078PA1]
gi|422538510|ref|ZP_16614384.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA1]
gi|422541293|ref|ZP_16617151.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA1]
gi|422543842|ref|ZP_16619682.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA1]
gi|422546341|ref|ZP_16622168.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA3]
gi|422550764|ref|ZP_16626561.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA1]
gi|422552944|ref|ZP_16628731.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA3]
gi|422554827|ref|ZP_16630597.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA2]
gi|422557534|ref|ZP_16633277.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA2]
gi|422559213|ref|ZP_16634941.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA1]
gi|422562339|ref|ZP_16638017.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA1]
gi|422567557|ref|ZP_16643183.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA2]
gi|422570683|ref|ZP_16646278.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL067PA1]
gi|422578082|ref|ZP_16653611.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA4]
gi|50839369|gb|AAT82036.1| putative Clp-family ATP-binding protease [Propionibacterium acnes
KPA171202]
gi|289154893|gb|EFD03575.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK187]
gi|289157979|gb|EFD06202.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J165]
gi|291377338|gb|ADE01193.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK137]
gi|313765265|gb|EFS36629.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA1]
gi|313772820|gb|EFS38786.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL074PA1]
gi|313793158|gb|EFS41225.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA1]
gi|313802753|gb|EFS43971.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA2]
gi|313806411|gb|EFS44918.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA2]
gi|313810960|gb|EFS48674.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA1]
gi|313814541|gb|EFS52255.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA1]
gi|313815263|gb|EFS52977.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA1]
gi|313817439|gb|EFS55153.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA2]
gi|313821974|gb|EFS59688.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA1]
gi|313824130|gb|EFS61844.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA2]
gi|313826497|gb|EFS64211.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA1]
gi|313828678|gb|EFS66392.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA2]
gi|313831726|gb|EFS69440.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL007PA1]
gi|313834393|gb|EFS72107.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL056PA1]
gi|313840416|gb|EFS78130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL086PA1]
gi|314916082|gb|EFS79913.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA4]
gi|314917003|gb|EFS80834.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA1]
gi|314921279|gb|EFS85110.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA3]
gi|314926635|gb|EFS90466.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA3]
gi|314931059|gb|EFS94890.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL067PA1]
gi|314954988|gb|EFS99394.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA1]
gi|314959028|gb|EFT03130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA1]
gi|314961301|gb|EFT05402.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA2]
gi|314964571|gb|EFT08671.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA1]
gi|314969669|gb|EFT13767.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA1]
gi|314977070|gb|EFT21165.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL045PA1]
gi|314980355|gb|EFT24449.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA2]
gi|314985530|gb|EFT29622.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA1]
gi|314987356|gb|EFT31447.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA2]
gi|314989103|gb|EFT33194.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA3]
gi|315078414|gb|EFT50445.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA2]
gi|315082119|gb|EFT54095.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL078PA1]
gi|315086096|gb|EFT58072.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA3]
gi|315087681|gb|EFT59657.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA1]
gi|315097365|gb|EFT69341.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL038PA1]
gi|315099470|gb|EFT71446.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA2]
gi|315102025|gb|EFT74001.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA1]
gi|315106363|gb|EFT78339.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA1]
gi|315110110|gb|EFT82086.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA2]
gi|327331349|gb|EGE73088.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA2]
gi|327333335|gb|EGE75055.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA3]
gi|327334854|gb|EGE76565.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL097PA1]
gi|327445648|gb|EGE92302.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA2]
gi|327447270|gb|EGE93924.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA1]
gi|327449698|gb|EGE96352.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA2]
gi|327454548|gb|EGF01203.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA3]
gi|327456619|gb|EGF03274.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA2]
gi|327457104|gb|EGF03759.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL092PA1]
gi|328755603|gb|EGF69219.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA1]
gi|328756683|gb|EGF70299.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA2]
gi|328761872|gb|EGF75382.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL099PA1]
gi|332674685|gb|AEE71501.1| putative ATP-dependent Clp protease ATP-binding subunit
[Propionibacterium acnes 266]
gi|333765299|gb|EGL42653.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 434-HC2]
gi|333769680|gb|EGL46777.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 409-HC1]
gi|335276695|gb|AEH28600.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes 6609]
gi|340767627|gb|EGR90152.1| Clp amino terminal domain protein [Propionibacterium sp. CC003-HC2]
gi|340769368|gb|EGR91892.1| Clp amino terminal domain protein [Propionibacterium acnes SK182]
gi|353557658|gb|EHC27026.1| ATP-dependent Clp protease ATP-binding subunit [Propionibacterium
sp. 5_U_42AFAA]
gi|365738680|gb|AEW82882.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365740922|gb|AEW80616.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365743179|gb|AEW78376.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn33]
gi|379978872|gb|EIA12196.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes PRP-38]
gi|407903240|gb|AFU40070.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes C1]
gi|456740409|gb|EMF64930.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes FZ1/2/0]
Length = 844
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/740 (55%), Positives = 557/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+
Sbjct: 380 SAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAAGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++
Sbjct: 672 ISK-SVNLGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ DRL KD+ ++VT +E + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVGQLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD +G+
Sbjct: 790 LFGEVKPGQIVVVDAAPEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|283455701|ref|YP_003360265.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
dentium Bd1]
gi|283102335|gb|ADB09441.1| clpC Negative regulator of genetic competence clpC/mecB
[Bifidobacterium dentium Bd1]
Length = 863
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/763 (54%), Positives = 576/763 (75%), Gaps = 25/763 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL + + +R+ I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATI 139
Query: 155 RMV-GESTEAVGAGVG-----GG------SSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G S + G G G GG SG+ + L+++G NLT A GKLDPV+GR
Sbjct: 140 DLIRGNSGGSQGEGKGDLANAGGVQDRRNQSGSAI--LDQFGRNLTAEAASGKLDPVIGR 197
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G
Sbjct: 198 SSEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKGKQVYSLDLG 257
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
+VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LA
Sbjct: 258 SMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLA 317
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLRERYE HH +
Sbjct: 318 RGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHHVT 377
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL SAA+LS +YI D LPDKAIDLIDEAG+R+R+R P E +EL+ ++ ++ +
Sbjct: 378 ITDGALQSAAELSSRYIQDSHLPDKAIDLIDEAGARLRIRRLTAPPELKELDAKVAKLAE 437
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHI 502
EK++A++ QDFEKA ELRDR+ L+A+ K KE S E E+ DV VV E I +
Sbjct: 438 EKDQAIKDQDFEKAAELRDRQEKLEAE-----RKEKESSWREGES-DVKMVVDEDVIAEV 491
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
+S TGIPV K++ ES +L+ ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP
Sbjct: 492 ISQTTGIPVFKLTQAESKKLMSMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSG 551
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EG
Sbjct: 552 SFIFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEG 611
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
G+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N
Sbjct: 612 GELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTN 671
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+
Sbjct: 672 LGTRDIAKAA-NTGFNLGTN-TESSYQRMKDQVSSELKQQFRPEFLNRLDDIIVFKQLTE 729
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
+V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+
Sbjct: 730 PQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDA 789
Query: 803 MAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPL 845
++EK+L ++++G V VD + +G +L + + E+ +P+
Sbjct: 790 ISEKILMGDLEDGQRVKVDAEGEG---ILGEFTFSGEAFEEPV 829
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVSLDDTR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|225352751|ref|ZP_03743774.1| hypothetical protein BIFPSEUDO_04381 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156358|gb|EEG69927.1| hypothetical protein BIFPSEUDO_04381 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 861
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/760 (54%), Positives = 569/760 (74%), Gaps = 21/760 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL + + +R+ I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATI 139
Query: 155 RMV-GESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G S + A GV + L+++G NLT A GKLDPV+GR
Sbjct: 140 DLIRGNSGDGKGDGKGDLANAGGVQDRRNQTGSAILDQFGRNLTAEAAAGKLDPVIGRSS 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPSIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL +AA LS +YI DR LPDKAIDLIDEAG+R+R+R P E +EL+ ++ ++ +EK
Sbjct: 380 DGALQAAADLSSRYIQDRHLPDKAIDLIDEAGARLRIRRLTAPPELKELDTKIAKLAEEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
++A++GQDFEKA ELRD++ L+A+ K KE S E E+ DV VV E I ++S
Sbjct: 440 DQAIKGQDFEKAAELRDKQEKLEAE-----RKQKESSWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
TGIPV K++ ES +L+ ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP SF
Sbjct: 494 QTTGIPVFKLTQAESKKLMTMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGAN-TESSYQRMKDQVSAELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDVEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
EK+L E+++G V VD + +G +L + E+ DP
Sbjct: 792 EKILMGELEDGQRVKVDAEGEG---ILGEFTFTGEAFEDP 828
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REG+GVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKALASKGVTLDDTR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|297172680|gb|ADI23647.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF4000_15H13]
Length = 826
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/771 (53%), Positives = 558/771 (72%), Gaps = 25/771 (3%)
Query: 71 VSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLRE 130
V S R+GK+ A G + +T +A KV+ A EAR H+Y+G+EHLLLGLLRE
Sbjct: 63 VEESVRKGKATIALGELP------YTSRAKKVLEFAMAEARDFNHSYVGTEHLLLGLLRE 116
Query: 131 GEGVAARVLENLGADPSNIRTQVIRMVG-ESTEAVGAGVGGGSS---------GNKMPTL 180
+G+AA+VL +LG R + ++++G + + AG+GGG S +K P L
Sbjct: 117 EKGIAAQVLNSLGVTLEEARGETVKVLGSDVAPSEPAGIGGGGSVTPSGKGDKKSKTPAL 176
Query: 181 EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 240
+ + +LT+LA + KLDP +GR +IERVV+IL RR KNNP LIGEPGVGKTAI EGLAQ
Sbjct: 177 DHFCRDLTELARQEKLDPTIGRATEIERVVEILCRRKKNNPVLIGEPGVGKTAIVEGLAQ 236
Query: 241 RIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 300
+I+ G++ + ++ +V+ LDM ++AGTKYRG+FEERLK +M EI+Q+ +ILFIDE+HT
Sbjct: 237 QISRGEITEGLKDYRVLALDMAAVIAGTKYRGQFEERLKAVMNEIQQAQTVILFIDEMHT 296
Query: 301 LIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPS 360
L+GAGAAEGAIDA+N+LKP+LARGELQCIGA+TL+EYRK+IEKD ALERRFQPV V PS
Sbjct: 297 LVGAGAAEGAIDASNMLKPALARGELQCIGASTLNEYRKYIEKDGALERRFQPVIVDPPS 356
Query: 361 VDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVR 420
ET++ILKGLR YE HH++ DEA+ +AA+L+ +YI+DRFLPDKAID+IDEAG+R R
Sbjct: 357 PQETVEILKGLRSHYEDHHRIVIPDEAIENAAKLADRYITDRFLPDKAIDVIDEAGARAR 416
Query: 421 LRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEM 480
+ A P E EL+ +L +I K EA+ QDFE+A ELRD E + I + +E
Sbjct: 417 IASAVPPPEVEELKGQLAEIANRKEEAIGNQDFERAAELRDEEREFSQSIRQQQEAWEEE 476
Query: 481 SKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAV 540
KA P ++ D+ IVS WTG+PV +++ ESDRL+ ME+ LHKR++GQ +A+
Sbjct: 477 RKAHR------PEISSEDVAFIVSRWTGVPVTRIAQTESDRLVNMEDELHKRIVGQQDAI 530
Query: 541 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 600
+AISRAIRR+R GLK+P RPI SFIFSGPTGVGK+ELA+ALA + F +A+IR+DMSE+
Sbjct: 531 EAISRAIRRSRAGLKDPRRPIGSFIFSGPTGVGKTELARALAEFLFADRDALIRVDMSEY 590
Query: 601 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 660
ME+ +VS+LIG+PPGYVGY + G LT+AVRRRPY+VVL DEIEKAHPDVFN++LQ+L++G
Sbjct: 591 MEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDEG 650
Query: 661 RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELK 720
LTD+ GR +DFKNT+LIMTSN+G+ I KGG G + SY+ ++ V +E++
Sbjct: 651 HLTDNYGRVIDFKNTVLIMTSNLGAREIAKGG---GLGFQSADPTKSYDVMQDKVRQEIE 707
Query: 721 QYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEE 780
+ F PEFLNR+D+ IVF L+K E+ EI I+L E+ +RL +D+ L +T+ E +V+E
Sbjct: 708 RAFNPEFLNRVDDTIVFHPLSKDEIAEIVHILLAEMRERLSEEDMTLTITDAAVELLVDE 767
Query: 781 GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVL 831
GY+ +GARPL+RAI + LED ++EK+L E GD + VD D DG L
Sbjct: 768 GYDEKFGARPLKRAIQKFLEDPLSEKILTAEFTAGDEIEVDADPDGGSLTL 818
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M FT++ KV+ +A+EEA RL H+Y+G+EH+LLGL+REGEGVAA VL NL D +
Sbjct: 1 MNYNFTDRVRKVLAMAREEAIRLQHDYVGTEHILLGLIREGEGVAAAVLTNLDVDLEQVH 60
Query: 151 TQVIRMV--GESTEAVG 165
+V V G++T A+G
Sbjct: 61 ERVEESVRKGKATIALG 77
>gi|357052633|ref|ZP_09113738.1| hypothetical protein HMPREF9467_00710 [Clostridium clostridioforme
2_1_49FAA]
gi|355386466|gb|EHG33505.1| hypothetical protein HMPREF9467_00710 [Clostridium clostridioforme
2_1_49FAA]
Length = 861
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/735 (55%), Positives = 554/735 (75%), Gaps = 12/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A +VI + EA R IG+EH+L+ +LREG+ VA+R+L +G + + ++
Sbjct: 81 YTPRARRVIENSYREAVRFKAAQIGTEHILIAMLREGDCVASRLLNTIGVNIQKLYIDLL 140
Query: 155 RMVGESTEAVG---AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+GE A G G GN PTL+ Y NLT+LA GKLDPV+GR+ +I+RV+Q
Sbjct: 141 AAMGEDAPAAKDDLQGARAGKRGNATPTLDSYSRNLTQLATAGKLDPVIGREQEIQRVIQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
IL RRTKNNPCLIGEPGVGKTA+ EGLAQ IASGDVP+TI K+V+TLD+ +VAG+KYR
Sbjct: 201 ILSRRTKNNPCLIGEPGVGKTAVVEGLAQMIASGDVPETIADKRVVTLDLSGMVAGSKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK++ E+ +S +++LFIDE+HT+IGAG AEGA+DA+NILKPSLARGE+Q IGA
Sbjct: 261 GEFEERIKKVISEVVESGDVLLFIDEIHTIIGAGGAEGALDASNILKPSLARGEIQLIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT++EYRK+IEKD ALERRFQPV V EP+ +E++ ILKGLR RYE HHK+ TD AL +A
Sbjct: 321 TTINEYRKYIEKDSALERRFQPVTVDEPTEEESVAILKGLRSRYEEHHKVEITDNALEAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YI+DRFLPDKAIDLIDEA S+VRL++ P++ + E E+ + + K EA++ +
Sbjct: 381 VKLSSRYINDRFLPDKAIDLIDEAASKVRLQNYTKPDKIKVYEAEIDGLEEAKEEAIKKE 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
+EKAGE++ ++ L+ +I+ ++K ++ +++ +V++ +I +VS WT IPV
Sbjct: 441 AYEKAGEIKKKQEKLREKITQTMEKWQKDKESKK------LIVSDNEIADVVSGWTRIPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
K++ +ES+RL +E LH+RV+GQ+EAV AIS+AIRR RVGLK+P RPI SF+F GPTG
Sbjct: 495 RKLAEEESERLRNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPKRPIGSFLFLGPTG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KAL+ FG+E A+IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VRR
Sbjct: 555 VGKTELSKALSEAMFGTENALIRVDMSEYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRR 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY+V+LFDEIEKAHPDVFN++LQ+L+DG +TD++GR +DFKNT++IMTSN G+ I
Sbjct: 615 NPYSVILFDEIEKAHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTSNAGAENI-IS 673
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+R+GF + D K + Y +K V +E+K+ F+PEFLNR+DE+IVF QLT+ +K IADI
Sbjct: 674 PKRLGFGMVSDAK-ADYTFMKDRVMDEVKRLFKPEFLNRIDEIIVFHQLTREHIKGIADI 732
Query: 752 MLKEVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
ML + R K + I L+ T+ +E ++++GY+ YGARPLRR I L+ED MAE+ML
Sbjct: 733 MLGTISKRCKEQLGIGLEATDSAKEHLIDKGYDDKYGARPLRRTIQNLVEDRMAEEMLDG 792
Query: 811 EIKEGDSVIVDVDSD 825
IK G V V D +
Sbjct: 793 SIKAGSLVEVGFDGE 807
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M ER+T +A + + LA A L H Y+G+EHLL+GLL+EG GVAA+VLE G + +
Sbjct: 1 MMERYTPQAQEALGLALGVAETLNHGYVGTEHLLIGLLQEGTGVAAKVLEENGVEEDRVI 60
Query: 151 TQVIRMVG 158
V +++
Sbjct: 61 ELVSQLIA 68
>gi|417932743|ref|ZP_12576081.1| Clp amino terminal domain protein [Propionibacterium acnes
SK182B-JCVI]
gi|340774379|gb|EGR96866.1| Clp amino terminal domain protein [Propionibacterium acnes
SK182B-JCVI]
Length = 842
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/740 (55%), Positives = 555/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT A +G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTDAARDGELDPVIGREREIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + + EK A+
Sbjct: 380 SAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIAHVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAAGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT ++
Sbjct: 672 ISK-SVNLGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTPPDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ DRL KD+ ++VT +E + + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVGQLEDRLADKDMGIEVTPSAKELLAKRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD +G+
Sbjct: 790 LFGEVKPGQIVVVDAAPEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|416998781|ref|ZP_11939450.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ACS-068-V-Sch12]
gi|333976934|gb|EGL77793.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ACS-068-V-Sch12]
Length = 815
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/826 (51%), Positives = 583/826 (70%), Gaps = 41/826 (4%)
Query: 35 MMSYMQPSASRISSFSGLRRSNALDTFTCDFHSTVAVSLSSRRGKSGRAG------GFVV 88
MM A R+ S L AL+ D+ T V + + K+G A G V
Sbjct: 1 MMQRFTDDAQRVLS---LAEEAALE-LGHDYVGTEHVLIGLTKVKNGVAAKALEELGLVT 56
Query: 89 KAMFE-------RFTEKAIKVIM---------LAQEEARRLGHNYIGSEHLLLGLLREGE 132
+ +FE R +KA + M LA + A ++ HNY+G+EH+LLGLL +G
Sbjct: 57 EDIFEAVEEHVGRGNKKATSIYMTPRVKHVLELAIQVANQMNHNYVGTEHILLGLLSDGS 116
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
GVA +L + +++ + ++G + + G G +S N + L ++ T+L + A+
Sbjct: 117 GVAVAILRAMNIRSNDVVEAIRSILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAK 176
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI + +VP+ +
Sbjct: 177 QGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTDNVPEILR 236
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++I+L +G ++AG KYRGEFEERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+D
Sbjct: 237 NKRIISLSIGSMLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMD 296
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARGE Q IGATTLDEY+K+IEKD ALERRFQPV+V EP+ ++ ++ILKGLR
Sbjct: 297 AANILKPALARGEFQVIGATTLDEYKKYIEKDAALERRFQPVQVGEPNEEDALEILKGLR 356
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HK + TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR++ + +
Sbjct: 357 DRYEAFHKAKITDEALTAAVSLSSRYITDRFLPDKAIDVVDEAASKVRMKVFSSAPDVKA 416
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
LE L + KEK AV QDFEKA +LRD E L +I DK K ++K E D
Sbjct: 417 LEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQLLLKEIG---DK-KSIAK---EKSDQKL 469
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
+VTE DI +V+ WTGIPV K++ +ES LL +EE LHKRV+GQDEAV A+++A+RRAR
Sbjct: 470 IVTEEDIAAVVAQWTGIPVAKIAEEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARA 529
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+
Sbjct: 530 GLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGA 589
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF
Sbjct: 590 PPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDF 649
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGF------DLDYDE-KDSSYNRIKSLVTEELKQYFRP 725
+NT++IMTSN+G+ + K +GF D + DE K+ + K V + +K++FRP
Sbjct: 650 RNTVIIMTSNLGAKALHKNSPELGFLAAKKSDFNVDENKEIEFKEAKKSVMDAVKRHFRP 709
Query: 726 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPS 785
EFLNR+DEMIVF LT+ ++KEI I++ +V RL+ +D++L+++ +V+EG + +
Sbjct: 710 EFLNRIDEMIVFHPLTEEDLKEIVTILMSDVTKRLEARDLQLEISPEAMHLLVKEGSDFT 769
Query: 786 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNVTV 830
GARPL+RAI RL+ED +++ +L + KEG + D D+D V++
Sbjct: 770 MGARPLKRAIQRLIEDPVSDLILKGDAKEGKIIKADAKDNDLVVSI 815
>gi|422528562|ref|ZP_16604544.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA1]
gi|314974734|gb|EFT18829.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA1]
Length = 844
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/740 (55%), Positives = 556/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+
Sbjct: 380 SAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAAGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKAPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++
Sbjct: 672 ISK-SVNLGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ DRL KD+ ++VT +E + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVGQLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD +G+
Sbjct: 790 LFGEVKPGQIVVVDAAPEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|294787498|ref|ZP_06752751.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315226925|ref|ZP_07868713.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|294484854|gb|EFG32489.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315121057|gb|EFT84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 862
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/739 (54%), Positives = 566/739 (76%), Gaps = 15/739 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL +G D +N+RT VI
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLVKMGVDIANLRTTVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPT-------LEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+ +++ G S G T L+++G NL + A++GKLDPV+GR +IE
Sbjct: 140 DSIRDTSAGSSTGQMANSGGVADKTNRSGSSLLDQFGRNLAQEAKDGKLDPVIGRSNEIE 199
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+ +L RRTKNNP LIGEPGVGKTA+ EGLA++I + DVP+T++ K++ LD+G ++AG
Sbjct: 200 RVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAEKIVADDVPETLKDKQIYALDLGSMIAG 259
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EI+ +++LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ
Sbjct: 260 SRYRGDFEERLKKVLKEIQVRGDVVLFIDEIHTIVGAGSADGAMGASDMLKPMLARGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATT +EYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLR++YE HH + TDEA
Sbjct: 320 TIGATTTEEYRKYIEKDAALERRFQPIQVAEPTIAETIEILKGLRKKYEDHHHVTITDEA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ +AA+LS +YI DR LPDKAIDLIDEAG+R+R++ P +EL+ ++ ++ +K++A
Sbjct: 380 IQAAAELSSRYIQDRHLPDKAIDLIDEAGARLRIKRLTAPSALKELDMKVAKVKADKDQA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFEKA LRD + L+ + K KE S E E+ DV VVTE I H++S+ T
Sbjct: 440 IADQDFEKAASLRDAQEKLEQE-----RKDKEKSWREGES-DVSMVVTEDTIAHVISSST 493
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ ES +LL ME+ LHKRVIGQDEAV A++R+IRRARVGLK+P RP SFIF+
Sbjct: 494 GIPVFKLTETESKKLLGMEDALHKRVIGQDEAVSALARSIRRARVGLKDPKRPSGSFIFA 553
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA Y F E+A+IR+DMSEF E+++ S+L G+PPGYVGY EGG+LTE
Sbjct: 554 GPTGVGKTELAKALAEYLFDDEDALIRVDMSEFGEKYSTSRLFGAPPGYVGYEEGGELTE 613
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++IMT+N+G+S
Sbjct: 614 KVRRKPFSVILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIIMTTNLGTSK 673
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I + + GF+L + ++SY R+K V ELK FRPEFLNRLD++IVF+QLT+ +V++
Sbjct: 674 ISQ-AQNTGFNLG-GQTETSYQRMKDQVQSELKGQFRPEFLNRLDDIIVFKQLTEPQVRQ 731
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+ +K + DRL + + +++T++ ++ + E+G++P GARPLRR I R +ED+++EK+
Sbjct: 732 IVDLDVKALNDRLFERHMTVELTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAISEKI 791
Query: 808 LAREIKEGDSVIVDVDSDG 826
L ++KE ++VD + +G
Sbjct: 792 LLGDLKENQEIVVDAEGEG 810
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARALKHNYIGTEHLLLGLIREGEGVAAKSLASKGVELDAAR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ + A
Sbjct: 61 QQVEEMIGKGSAA 73
>gi|310657474|ref|YP_003935195.1| protein disaggregation chaperone [[Clostridium] sticklandii]
gi|308824252|emb|CBH20290.1| protein disaggregation chaperone [[Clostridium] sticklandii]
Length = 821
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/742 (56%), Positives = 561/742 (75%), Gaps = 15/742 (2%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F+ F+ + + L+ EA+ LGH+YIG+EHLLL LL+E E + R+L G D + +
Sbjct: 76 FQGFSPRTKGIFELSIMEAKMLGHSYIGTEHLLLALLKEKECIGCRLLMEKGIDYNLVFK 135
Query: 152 QVIRMVGESTEAVGAGVGGGSS-----GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+++ ++G S+ G +S PTL +YG +LTK A+E +LDPV+GR +I
Sbjct: 136 EIMNLLGGSSAGKEPNQAGNTSSMNSQNPNTPTLNQYGVDLTKEADENRLDPVIGRSKEI 195
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
ER++QIL RRTKNNP LIG+PGVGKTAI EGLAQ+I SGD+P T++ K+++TL+MG L+A
Sbjct: 196 ERIIQILSRRTKNNPVLIGDPGVGKTAIIEGLAQKINSGDIPSTLKNKRIMTLEMGNLLA 255
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G KYRGEFEER+KK++EE+K + ++I+FIDE+H L GAG AEGAIDA+NI+KP+LARGE+
Sbjct: 256 GAKYRGEFEERVKKIVEELKANKDVIIFIDEIHNLAGAGGAEGAIDASNIMKPALARGEI 315
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q +GATT+DEYRKHIEKD ALERRFQ V V EP+ +++I+IL GLR+RYE HHK++ TDE
Sbjct: 316 QVMGATTIDEYRKHIEKDSALERRFQTVMVDEPNTEDSIKILHGLRDRYEAHHKVKITDE 375
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
A+ +A LS++YI+DRFLPDKAIDLIDEA SRVRLR P+ +ELE +L +++ EK E
Sbjct: 376 AIKAAVDLSHRYITDRFLPDKAIDLIDEAASRVRLRKYMEPDNIKELEDKLSKLSMEKEE 435
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
A+ QDFEKA ++RD E +K Q+ ++ + + TE VV E DI IVS+W
Sbjct: 436 AIATQDFEKAAKIRDEEKQIKEQLGENKEQWTKKNYTSTE------VVLEKDIAEIVSSW 489
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+PV ++ +ES +LL +E LHKRVIGQ+EAV+AISRAIRRAR G+K+P RPI SFIF
Sbjct: 490 TGVPVTRLQMEESTKLLDLENILHKRVIGQEEAVEAISRAIRRARTGMKDPKRPIGSFIF 549
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTGVGK+EL+KALA F E++++R+DMSE+ME+H+VSKLIGSPPGYVGY EGGQLT
Sbjct: 550 LGPTGVGKTELSKALAEAMFEDEDSIVRIDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLT 609
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E +RR+PY+VVLFDEIEKAHPDVFNM+LQIL+DGRLTDSKGRTVDFKNT+LIMTSNVG++
Sbjct: 610 EKIRRKPYSVVLFDEIEKAHPDVFNMLLQILDDGRLTDSKGRTVDFKNTVLIMTSNVGAT 669
Query: 687 VIEKGGRRIGFDLDYDE---KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
I+K + +GF DE + ++Y ++K V ELK+ F+PEFLNR+D++IVF LT
Sbjct: 670 TIQK-QKTLGFSTVTDEEKKEKAAYEKMKDNVMVELKRSFKPEFLNRVDDIIVFHALTDR 728
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
E+++I +M+ + RL K+I +++ E + + + GY+ +GARPL+RAI RLLED +
Sbjct: 729 ELEKIVYLMISNLEKRLMDKNITIELDEAAMKLITKNGYDLEFGARPLKRAIQRLLEDEI 788
Query: 804 AEKMLAREIKEGDSVIVDVDSD 825
+EK+L EI + D++ V D
Sbjct: 789 SEKLLRGEINDSDNIKVTAVDD 810
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M E FTE+A + I LA+ EA +LGHN GSEH+LLGL+ EG+G+A +VL G ++
Sbjct: 1 MMENFTERAKQAIELAKREASKLGHNIAGSEHILLGLMAEGQGIAYQVLYKFGLTLESLV 60
Query: 151 TQVIRMVG 158
++I + G
Sbjct: 61 REIIDLEG 68
>gi|261337923|ref|ZP_05965807.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
gallicum DSM 20093]
gi|270277412|gb|EFA23266.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
gallicum DSM 20093]
Length = 856
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/740 (55%), Positives = 560/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ I
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGDLRSATI 139
Query: 155 RMV-----GESTE--AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
++ GE A GV + L+++G NLT A+EGKLDPV+GR +IE
Sbjct: 140 DLIRGNAGGEDKGDLANAGGVSDKARQTGSAILDQFGRNLTAEAQEGKLDPVIGRSSEIE 199
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+ +L RRTKNNP LIG+PGVGKTA+ EGLAQ+I +GDVP+T++ K+V +LD+G +VAG
Sbjct: 200 RVMVVLSRRTKNNPVLIGDPGVGKTAVVEGLAQKIVAGDVPETLKDKQVYSLDLGSMVAG 259
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGELQ
Sbjct: 260 SRYRGDFEERLKKVLKEIKARGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH + TD A
Sbjct: 320 TIGATTTDEYRKYIEKDAALERRFQPIQVNEPSIAETIEILKGLRARYENHHHVTITDAA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ SAA+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ ++ KEK+EA
Sbjct: 380 IQSAAELSARYIQDRRLPDKAIDLIDEAGARLRIKRLTAPPELKELDAKVAKVAKEKDEA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAG-DVGPVVTEVDIQHIVSAW 506
++ Q+FEKA ELRDR+ L+A+ KE +A E G DV VV E I ++S
Sbjct: 440 IKDQEFEKAAELRDRQEKLEAE-------RKEKEQAWREGGSDVKMVVDEDVIAEVISQS 492
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRR RVGLK P RP SFIF
Sbjct: 493 TGIPVVKLTQAESKKLLNMEAELHKRIIGQDEAVSALSRSIRRTRVGLKGPKRPAGSFIF 552
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
+GPTGVGK+ELAKALA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+LT
Sbjct: 553 AGPTGVGKTELAKALAQFLFDDDDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELT 612
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 613 EKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTR 672
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVFRQLT+ +V+
Sbjct: 673 DIAKAA-NTGFNLGGN-TESSYQRMKDQVSNELKQQFRPEFLNRLDDIIVFRQLTEGQVR 730
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
+I D+ + + +RL + +EL +T+ ++ + ++G++P GARPLRR I R +ED+++EK
Sbjct: 731 QIVDLDVNLLNERLFERHMELDLTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEK 790
Query: 807 MLAREIKEGDSVIVDVDSDG 826
+L E+ + + VIVD + +G
Sbjct: 791 ILMGELNDNERVIVDAEGEG 810
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L ++G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASMGVTLDDTR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ T A
Sbjct: 61 KQVEEMIGKGTAA 73
>gi|217967862|ref|YP_002353368.1| ATPase [Dictyoglomus turgidum DSM 6724]
gi|217336961|gb|ACK42754.1| ATPase AAA-2 domain protein [Dictyoglomus turgidum DSM 6724]
Length = 823
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/745 (55%), Positives = 568/745 (76%), Gaps = 22/745 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ A E A+ L HNYIG+EHLLLGLL+EGEGVAA VLE +G ++ +++
Sbjct: 80 FTSRAKKVLEYASESAQELNHNYIGTEHLLLGLLKEGEGVAAHVLEGMGVRLEDVTIEIL 139
Query: 155 RMVGES---TEAVGAGVGGGSSGNKM-------PTLEEYGTNLTKLAEEGKLDPVVGRQP 204
+++GE T+ G S+ N + TL+E+G +LT+LA +GKLDP++GR+
Sbjct: 140 KLLGEPIDPTKIRGRQQMNTSNNNSLKKKRTVTATLDEFGRDLTQLARQGKLDPIIGREK 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
++ER++QIL RRTKNNP L+GEPGVGKTAI EGLAQ+I G+VPDT+ K+++ +DMG +
Sbjct: 200 ELERIIQILSRRTKNNPVLVGEPGVGKTAIVEGLAQKIVDGEVPDTLLNKRIVAIDMGSI 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAGTKYRGEFEER+++++EE+K + ++ILFIDE+HTL+GAGAAEGA+DAANILKPSLA+G
Sbjct: 260 VAGTKYRGEFEERMQRIIEEVKMAKDVILFIDEIHTLVGAGAAEGAVDAANILKPSLAKG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
E+Q IGATT EYRK+IEKD ALERRFQP+ V EP+ +ETIQILKGLRE+YE +H+++ T
Sbjct: 320 EIQLIGATTPSEYRKYIEKDGALERRFQPIMVNEPTPEETIQILKGLREKYENYHRVKIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEA+ A +LS +YI+DRFLPDKAID+IDEA +RVRLR Q LE EL +I ++K
Sbjct: 380 DEAIEEAVKLSVRYITDRFLPDKAIDVIDEASARVRLRK-QKSTVHSNLELELARIREQK 438
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
A+R Q FE+A +LRD E ++ + +D + D+G VVT D+ +V+
Sbjct: 439 EIAIRNQAFERAAQLRDEERKIEEYLRNFIDT--------SSPSDLG-VVTPEDVAQVVA 489
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
WTGIPV ++ +E +RLL+MEE LHKR+I QDEAV+ +SRAIRR+R GLK+P RPI F
Sbjct: 490 TWTGIPVAQLLIEERERLLRMEEELHKRIISQDEAVRVVSRAIRRSRSGLKDPRRPIGVF 549
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
+F GPTGVGK+ELA+ALA Y FG+E A+IR DMSEFME+HTVS+LIG+PPGYVGY EGGQ
Sbjct: 550 MFLGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHTVSRLIGAPPGYVGYEEGGQ 609
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE V RRPY+V+LFDEIEKAH DVFN++LQI+++G+LTD GR V FKNT+LIMTSN G
Sbjct: 610 LTEKVHRRPYSVILFDEIEKAHSDVFNILLQIMDEGQLTDGHGRRVSFKNTILIMTSNFG 669
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ ++ IGF ++++ S+++IK L+ E+K+YFRPEFLNRLDE++ F+ LTK +
Sbjct: 670 AEYFKQEA-SIGF-ASKEDREKSFDKIKDLILSEMKKYFRPEFLNRLDEIVFFKPLTKED 727
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+K+I +++LK V +R++ K +EL++++ +E ++E+GY+P YGARPL+R I +ED +A
Sbjct: 728 LKQILELLLKPVQERIREKKLELEISDEVKELLLEKGYDPQYGARPLKRTIQYYIEDPLA 787
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVT 829
E +L + KEGD + ++D G +
Sbjct: 788 EFILQGDFKEGDIIRAELDKKGEIV 812
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 61/88 (69%), Gaps = 9/88 (10%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M ++ T++A +V++LAQEEARRL ++ +G+EH+LLGL+RE G+AA+VL NLG D + +R
Sbjct: 1 MMDKLTQRAYRVLLLAQEEARRLNYSTVGTEHILLGLIREEGGIAAQVLINLGLDLNQLR 60
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNKMP 178
++ R++G G G+S +P
Sbjct: 61 NEIERLIGR---------GDGTSYGALP 79
>gi|350568861|ref|ZP_08937259.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Propionibacterium avidum ATCC 25577]
gi|348661104|gb|EGY77800.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Propionibacterium avidum ATCC 25577]
Length = 843
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/740 (55%), Positives = 556/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT A +G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTDAARDGELDPVIGREKEIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIQVAEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + + EK A+
Sbjct: 380 SAANLAARYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIAHVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAAGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF ++ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++
Sbjct: 672 ISK-SVNLGFS-KANDAESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQSDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ +RL KD+ ++VT +E + + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVDQLEERLGDKDMGIEVTPAAKELLSKRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD +G+
Sbjct: 790 LFGEVKPGQIVVVDAAPEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|365873228|ref|ZP_09412761.1| ATPase with chaperone activity, ATP-binding subunit
[Thermanaerovibrio velox DSM 12556]
gi|363983315|gb|EHM09522.1| ATPase with chaperone activity, ATP-binding subunit
[Thermanaerovibrio velox DSM 12556]
Length = 817
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/731 (57%), Positives = 561/731 (76%), Gaps = 15/731 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV- 153
+ +A +V+ L+ EAR +G NY+G+EH+LLGLL EGEGVA ++L +G DP +R V
Sbjct: 81 LSPRAKRVLDLSMREARNMGVNYVGTEHILLGLLAEGEGVAFQILNRMGLDPVKVRQDVQ 140
Query: 154 IRMVGESTEAVGAGVGGGS-----SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+ G S+E G + +K PTL++ G +L++LA G+LDPV+GR +I+R
Sbjct: 141 AYLSGTSSELQDPRRSGDDQDRKGAQSKTPTLDQLGVDLSELARNGELDPVIGRGKEIQR 200
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
+VQ+L RRTKNNP LIG+PGVGKTAI EGLAQR+ SGD+P+ ++GK+V+ L++G LVAGT
Sbjct: 201 LVQVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRVVSGDIPEVLKGKRVVQLNVGNLVAGT 260
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEER++KL++EIK+S +ILF+DE+HTL+GAG AEGA+DAANILKPSLARGE Q
Sbjct: 261 KYRGEFEERMRKLVKEIKESKNVILFVDEIHTLVGAGGAEGAVDAANILKPSLARGEFQV 320
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATT++EYRK+IEKD ALERRFQP+ V EPS ++T+ IL+GLR+RYE HH+++ +DEAL
Sbjct: 321 IGATTMEEYRKYIEKDAALERRFQPIHVDEPSEEDTVLILEGLRDRYEAHHRVKISDEAL 380
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
V+AA+LS +YI++R+LPDKAIDLIDEA +R RL+ + PEE +E+EK L ++ KEK AV
Sbjct: 381 VAAARLSKRYITERYLPDKAIDLIDEAAARSRLKTMEAPEELKEMEKRLEEVRKEKESAV 440
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
Q+FEKA LRD E L ++ V + ++ + + E PVVT DI IVS WTG
Sbjct: 441 MSQEFEKAATLRDEERRLYEEMEE-VRRRWQVRRNQEE-----PVVTGEDIAVIVSEWTG 494
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
+PV +++ +E+ RLL+MEE +H+R++GQ+EAV A++RAIRRAR GLK+P RP+ SF+F G
Sbjct: 495 VPVVQLTEEEAKRLLRMEEEIHRRLVGQEEAVSAVARAIRRARSGLKDPRRPVGSFLFLG 554
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELA+ LA + FGS++AMIR DMSEFMERH V+KLIG+PPGYVG+ EGG+LTEA
Sbjct: 555 PTGVGKTELARRLAWFLFGSDDAMIRFDMSEFMERHEVAKLIGAPPGYVGHEEGGKLTEA 614
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRRRPY+VVLFDEIEKAHPDVFN++LQ+LEDGRLTD +G VDF+NT++IMTSNVG+S
Sbjct: 615 VRRRPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDGQGHVVDFRNTVVIMTSNVGASDA 674
Query: 689 EKGGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
KG +GF DE ++R K + + +K+ FRPEFLNR+DEM+VFR L + E+
Sbjct: 675 SKG--HLGFSSGGDDEALEGWDRTKGAIMDAVKRTFRPEFLNRVDEMVVFRPLRREELLG 732
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
IA +ML EV R K I L V ++ ++V+EEG++P +GARPLRR I +L+ED +A+ M
Sbjct: 733 IARMMLDEVVARCAEKGIRLSVNDQVVQKVLEEGFDPKFGARPLRRTIQKLVEDPLADMM 792
Query: 808 LAREIKEGDSV 818
L ++EG V
Sbjct: 793 LEGLLREGIHV 803
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M++ FTE+ KV+ LA EA RLGH IG+EH+LLGLL EGEGVA++VL G + IR
Sbjct: 1 MWQFFTERGKKVVQLAHREALRLGHEVIGTEHILLGLLAEGEGVASQVLRAAGLELDEIR 60
Query: 151 TQVIRMVG 158
QV R+VG
Sbjct: 61 EQVERVVG 68
>gi|227505957|ref|ZP_03936006.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
gi|227197479|gb|EEI77527.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
Length = 904
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/760 (54%), Positives = 566/760 (74%), Gaps = 42/760 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLIKLGADLPRVRQQVI 139
Query: 155 RMV----GESTEAVG---------------------AGVGGGSSGNKMPTLEEYGTNLTK 189
+++ G + E G A G G N + L+++G NLT+
Sbjct: 140 QLLSGYEGGNGENDGQSQGGPVGAGAGAGAGLGGRTAPSGAGERSNSL-VLDQFGRNLTQ 198
Query: 190 LAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPD 249
A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKT++ EGLA I +G VP+
Sbjct: 199 AAKDGKLDPVVGRDSEIERIMQVLSRRTKNNPVLIGEPGVGKTSVVEGLALDIVNGKVPE 258
Query: 250 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 309
T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEG
Sbjct: 259 TLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEG 318
Query: 310 AIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 369
AIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPVKV EPS+D+TI ILK
Sbjct: 319 AIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVKVDEPSLDDTILILK 378
Query: 370 GLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 429
GLR++YE HH++ YTDEAL +AA LS +YI+DRFLPDKA+DL+DEAG+R+R++ PE
Sbjct: 379 GLRDKYEAHHRVSYTDEALKAAASLSDRYINDRFLPDKAVDLLDEAGARMRIKRMTAPEG 438
Query: 430 ARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--A 487
RE++ + ++ +EK A+ QDFEKA LRD+E L G+E ++ E +
Sbjct: 439 LREVDDRIAEVRREKEAAIDAQDFEKAAGLRDKERKL----------GEERAEKEKQWRT 488
Query: 488 GDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISR 545
GD+ + V E I +++ WTGIPV K++ ES RLL ME+ LHKR+IGQDEAVKA+SR
Sbjct: 489 GDLEEIAEVGEEQIAEVLAHWTGIPVLKLTEKESSRLLHMEDELHKRIIGQDEAVKAVSR 548
Query: 546 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 605
AIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++DM EF +R T
Sbjct: 549 AIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQIDMGEFHDRFT 608
Query: 606 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 665
S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD
Sbjct: 609 ASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDG 668
Query: 666 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFR 724
+GR VDFKNT+LI TSN+G+ I K +GF + + D+ Y R+K+ V +ELK++FR
Sbjct: 669 QGRIVDFKNTVLIFTSNLGTQDISK-AVGLGFSGSSEPDSDAQYERMKNKVNDELKKHFR 727
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNR+DE++VF QLT+ ++ E+ ++++ V +L +D+ +++T++ ++ + + G++P
Sbjct: 728 PEFLNRIDEIVVFHQLTQEQIVEMVELLIGRVEKQLAERDMGIELTQKAKDLLAKRGFDP 787
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 824
GARPLRR I R +ED ++EK+L EI G+ + VDV++
Sbjct: 788 VLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVEN 827
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G ++
Sbjct: 61 REVEEIIGHGSQ 72
>gi|334564013|ref|ZP_08517004.1| ATP-dependent Clp protease [Corynebacterium bovis DSM 20582]
Length = 838
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/750 (55%), Positives = 565/750 (75%), Gaps = 27/750 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMV----GESTEAVG-------------AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLD 197
+++ G E+ G G G N + L+++G NLT+ A +GKLD
Sbjct: 140 QLLSGYEGAEPESEGDEPATAGVGAGAEGGAKIGQKSNSL-VLDQFGRNLTQAARDGKLD 198
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T++ K++
Sbjct: 199 PVVGREKEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALAIVNGKVPETLKDKQLY 258
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
+LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAIDAA+IL
Sbjct: 259 SLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASIL 318
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP LARGELQ IGATTL+EYRKHIEKD ALERRFQPV+VPEPSV++T++ILKGLR+RYE
Sbjct: 319 KPKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVQVPEPSVEDTVEILKGLRDRYEA 378
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++ TD ALV+AAQLS +YI+DRFLPDKA+DLIDEAG+R+R++ P+ + +++++
Sbjct: 379 HHRVSITDGALVAAAQLSSRYINDRFLPDKAVDLIDEAGARMRIKRMTAPKSIQVVDEKI 438
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
++ + K A+ QDFEKA LRD D + +K K+ E E DV V E
Sbjct: 439 AEVRRRKEAAIDDQDFEKAAALRD---DERTLTEEREEKEKQWRAGELE--DVAEVGEE- 492
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
I ++ WTGIPV K++ +ES RLL+ME+ LHKR+IGQ++AV+A+SRAIRR R GLK+P
Sbjct: 493 QIAEVLGNWTGIPVVKLTEEESSRLLRMEDELHKRIIGQEDAVRAVSRAIRRTRAGLKDP 552
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+PPGYV
Sbjct: 553 KRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYV 612
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GR VDFKNT+L
Sbjct: 613 GYDEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRVVDFKNTVL 672
Query: 678 IMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 736
I TSN+G+ I K +GF + ++ Y R+K V +ELK++FRPEFLNR+D+++V
Sbjct: 673 IFTSNLGTQDISK-AVGMGFSGVGAADEAGRYERMKQKVNDELKKHFRPEFLNRIDDIVV 731
Query: 737 FRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIM 796
F QLT+ E+ ++ D++L V L KD+ L+V++ ++ + ++G++P GARPLRR I
Sbjct: 732 FHQLTQDEIVQMVDLLLGRVERALAQKDMGLEVSDTAKKLLADKGFDPVLGARPLRRTIQ 791
Query: 797 RLLEDSMAEKMLAREIKEGDSVIVDVDSDG 826
R +ED ++EK+L EI G+ V VDV +DG
Sbjct: 792 REIEDQLSEKILFGEIGAGEIVTVDV-TDG 820
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 56/68 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 61 TEVEDIIG 68
>gi|317507816|ref|ZP_07965517.1| ATPase [Segniliparus rugosus ATCC BAA-974]
gi|316253858|gb|EFV13227.1| ATPase [Segniliparus rugosus ATCC BAA-974]
Length = 842
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/752 (55%), Positives = 559/752 (74%), Gaps = 46/752 (6%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMP-------------------TLEEYGTNLTKLAEEGK 195
+++ G S G K P L+++G NLT+ A +GK
Sbjct: 140 QLLS-----------GYSGGGKEPEAAGAGGRGGEAGTPSTSLVLDQFGRNLTRAALDGK 188
Query: 196 LDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKK 255
LDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K+
Sbjct: 189 LDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQ 248
Query: 256 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 315
+ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+
Sbjct: 249 LYTLDLGSLVAGSRYRGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAAS 308
Query: 316 ILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERY 375
ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RY
Sbjct: 309 ILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRY 368
Query: 376 EIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK 435
E HH++ TD AL +AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++
Sbjct: 369 EAHHRVSITDSALAAAASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDE 428
Query: 436 ELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVT 495
++ ++K A+ QDFEKA LRD E L AQ + + + +GD+ VV
Sbjct: 429 QIANTRRQKESAIDEQDFEKAAGLRDSEKKLVAQ--------RAEREKQWRSGDM-DVVA 479
Query: 496 EVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
EVD I +++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ +AV A+++AIRR R
Sbjct: 480 EVDEEQIAEVLANWTGIPVFKLTEEETARLLRMEDELHKRIIGQRDAVAAVAKAIRRTRA 539
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+
Sbjct: 540 GLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGA 599
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDF
Sbjct: 600 PPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHHEIYNTLLQVLEDGRLTDGQGRTVDF 659
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS-YNRIKSLVTEELKQYFRPEFLNRL 731
KNT+LI TSN+G+S I K +G E ++S Y R+K V +ELK++FRPEFLNR+
Sbjct: 660 KNTVLIFTSNLGTSDISKA---VGLGFSSGEGNTSNYERMKQKVQDELKKHFRPEFLNRI 716
Query: 732 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 791
DE++VF QLT E+ ++ D+M+ V LK KD+ +++TE+ + + + G++P GARPL
Sbjct: 717 DEIVVFHQLTTEEIVQMVDLMITRVATALKAKDMSIELTEQAKGLLAKRGFDPVLGARPL 776
Query: 792 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
RR I R +ED ++EK+L E G V+VDV+
Sbjct: 777 RRTIQREIEDQLSEKILFGEFGAGQKVLVDVE 808
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +
Sbjct: 61 SQVEEIIGQGQQG 73
>gi|154487051|ref|ZP_02028458.1| hypothetical protein BIFADO_00889 [Bifidobacterium adolescentis
L2-32]
gi|154084914|gb|EDN83959.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium adolescentis L2-32]
Length = 864
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/742 (55%), Positives = 566/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL + + +R+ I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATI 139
Query: 155 RMV-GESTEAVGAGVG-----GGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G S++ G G GG + T L+++G NLT A GKLDPV+GR
Sbjct: 140 DLIRGNSSDGKNDGKGELANAGGVQDRRNQTGSAILDQFGRNLTAEAAAGKLDPVIGRSN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLRERYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL +AA+LS +YI DR LPDKAIDLIDEAG+R+R+R P E +EL+ + ++ +EK
Sbjct: 380 DGALQAAAELSSRYIQDRHLPDKAIDLIDEAGARLRIRRLTAPPELKELDAKAAKLAEEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
++A++ QDFEKA ELRD++ ++++ K KE + E E+ DV VV E I ++S
Sbjct: 440 DQAIKDQDFEKAAELRDKQEKIESE-----RKEKESAWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
TGIPV K++ ES +L+ ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP SF
Sbjct: 494 QTTGIPVFKLTQAESKKLMGMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPAGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGTN-TESSYQRMKEQVSAELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L ++++G V VD + +G
Sbjct: 792 EKILMGDLEDGQRVKVDAEGEG 813
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|83589034|ref|YP_429043.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
gi|83571948|gb|ABC18500.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
Length = 840
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/767 (57%), Positives = 580/767 (75%), Gaps = 40/767 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A +V+ LA EEARR G NY+G+EHLLLGLL EGEG+AA+VL LG P IR QVI
Sbjct: 79 LTPRAKRVLELANEEARRQGVNYVGTEHLLLGLLEEGEGLAAQVLGGLGLSPEKIREQVI 138
Query: 155 RMVGESTE------------------AVGAGVG----GGSSGNKM--------PTLEEYG 184
++G + + A G+G G +G KM PTL+++
Sbjct: 139 ALLGGAGQPQTGGWTVLFGNLPFGMAAFPGGMGFQAQGMPAGAKMQERRPGQTPTLDQFS 198
Query: 185 TNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAS 244
+LT+LA E KLDPVVGR+ +IERVVQIL RRTKNNP LIG+PGVGKTAI EGLAQ+I
Sbjct: 199 RDLTRLAREDKLDPVVGREKEIERVVQILSRRTKNNPVLIGDPGVGKTAIVEGLAQKIVQ 258
Query: 245 GDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 304
VP+ + K+V+ LDM +VAGTKYRGEFEER KK+M+E++ + +ILFIDE+HTLIGA
Sbjct: 259 NQVPEVLRDKRVVALDMSGMVAGTKYRGEFEERFKKVMDEVRAAGNVILFIDELHTLIGA 318
Query: 305 GAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 364
GAAEGAIDAANILKP+LARGELQ IGATT+DEYRKHIE+D ALERRFQ V V EP+V+ET
Sbjct: 319 GAAEGAIDAANILKPALARGELQTIGATTIDEYRKHIERDAALERRFQAVMVEEPTVEET 378
Query: 365 IQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHA 424
I ILKGLR+RYE HH+++ TDEAL +AA+LS +YI+DR+LPDKAIDL+DEAGSRVRL+
Sbjct: 379 IAILKGLRDRYEAHHRVKITDEALEAAARLSDRYITDRYLPDKAIDLVDEAGSRVRLKVY 438
Query: 425 QLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 484
P++ ++LE L ++ KEK AV Q+FEKA LRD E +K ++ A + + +
Sbjct: 439 TAPDDVKKLEARLEELEKEKAAAVNAQEFEKAATLRDEEKKIKEELEA------KKGEWQ 492
Query: 485 TEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAIS 544
E G VVT DI IVS+WTGIPV +++ +ES+RLL +E+ LH+RVIGQDEAV A++
Sbjct: 493 KEKGLEKSVVTPEDIAQIVSSWTGIPVTQLAQEESERLLHLEDVLHQRVIGQDEAVHAVA 552
Query: 545 RAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 604
RA+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AM+R DMSE+ME+H
Sbjct: 553 RAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDAMVRFDMSEYMEKH 612
Query: 605 TVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTD 664
TVS+L+G+PPGYVGY E GQLTEAVRRRPY+VVLFDEIEKAHPD+FN++LQ+L+DGRLTD
Sbjct: 613 TVSRLVGAPPGYVGYEESGQLTEAVRRRPYSVVLFDEIEKAHPDIFNVLLQVLDDGRLTD 672
Query: 665 SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS-SYNRIKSLVTEELKQYF 723
+KGRTVDF+NT++IMTSN+G+S I++ +GF E + SY+++K + EEL++ F
Sbjct: 673 AKGRTVDFRNTVIIMTSNIGASTIKR--ESLGFKASTSEVAAESYDKMKKHILEELRRTF 730
Query: 724 RPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYN 783
RPEFLNR+D++IVF L++ ++++I D+ML E+ RL+ ++ ++VT+ ++ +V EG++
Sbjct: 731 RPEFLNRIDDLIVFHALSRDDIRKIVDLMLAELNRRLEDNNLSVEVTDEAKDILVREGFD 790
Query: 784 PSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTV 830
+YGARPLRRAI L+ED ++++MLA + K GD V V DG + +
Sbjct: 791 EAYGARPLRRAIQTLIEDQLSDEMLAGKFKPGDKVRA-VARDGKIAL 836
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
RFTE+A +V+ LAQEEA L H IG+EH+LLG+LREG+ VAAR L NLG + +R +V
Sbjct: 3 RFTERANRVLRLAQEEALALRHPAIGTEHILLGILREGDSVAARALTNLGVNIKAVREEV 62
Query: 154 IRMVGESTEAVGAGVG 169
+++ VG +G
Sbjct: 63 RKVIRPGEAVVGGELG 78
>gi|395203114|ref|ZP_10394348.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium humerusii P08]
gi|422441695|ref|ZP_16518504.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA3]
gi|422473020|ref|ZP_16549501.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA2]
gi|422573302|ref|ZP_16648864.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL044PA1]
gi|313835678|gb|EFS73392.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA2]
gi|314928349|gb|EFS92180.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL044PA1]
gi|314970279|gb|EFT14377.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA3]
gi|328908068|gb|EGG27827.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium humerusii P08]
Length = 842
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/740 (55%), Positives = 556/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT A G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTDAARGGELDPVIGREREIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLDEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + + EK A+
Sbjct: 380 AAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIAHVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAAGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++
Sbjct: 672 ISK-SVNLGFS-KVDDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M++++ RL KD+ ++VT +E + + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVEQLEGRLGDKDMGIEVTPAAKELLSKRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD S+G+
Sbjct: 790 LFGEVKPGQIVVVDAASEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|422504031|ref|ZP_16580268.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA2]
gi|315082738|gb|EFT54714.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA2]
Length = 844
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/740 (55%), Positives = 556/740 (75%), Gaps = 17/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA ++ H+YIG+EH+LLGL+REGEGVAA+VL LGAD + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVL 139
Query: 155 RMV----GESTEAVGAGVG-GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+++ G+ +A +G G + L+++G NLT+ A +G+LDPV+GR+ +IERV
Sbjct: 140 QLLQGYQGDERQAATSGAPEAGPQQSSATILDQFGRNLTEAARDGELDPVIGREREIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+ +L RRTKNNP LIGEPGVGK+A EGLAQ I GDVP+T+ KK+ +LD+G +VAG++
Sbjct: 200 MVVLSRRTKNNPVLIGEPGVGKSACVEGLAQAIVRGDVPETLRDKKIYSLDLGSMVAGSR 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEER+KK+++EIK +IILFIDE+HTL+GAGAAEGAIDAA++LKP LARGELQ I
Sbjct: 260 YRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTL EYRK+IEKD ALERRFQP++V EPS+ I+ILKGLR+RYE HHK+ TDEA+
Sbjct: 320 GATTLGEYRKYIEKDAALERRFQPIQVDEPSIPLAIEILKGLRDRYEAHHKITITDEAIT 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
SAA L+ +YI DRFLPDKAIDLIDEAG+R+ +R P + RE ++ + ++ EK A+
Sbjct: 380 SAANLASRYIQDRFLPDKAIDLIDEAGARMNIRRMTAPPDLREFDERIARVRVEKEAAID 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGD--VGPVVTEVDIQHIVSAWT 507
QDFE+A LRD E L A+ +E + E + GD V VV +I ++S T
Sbjct: 440 AQDFERAAGLRDDEKKLLAE--------REAKEEEWKQGDESVPAVVGPDEIAEVLSGAT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV K++ +ES RLL ME+ + KR +GQ++AVKA+ R+IRR R GLK+P RP SFIF+
Sbjct: 492 GIPVFKLTEEESQRLLHMEDEIGKRYVGQEDAVKALCRSIRRTRAGLKDPKRPAGSFIFA 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GP+GVGK+EL KAL + FG E+A+I LDMSE+ E+HT S++ GSPPG+VGY EGGQLTE
Sbjct: 552 GPSGVGKTELTKALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGFVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VRR+P++V+LFDEIEKAHPD+FN +LQIL++GRLTD++GR VDFKNT++++T+N+G+
Sbjct: 612 KVRRKPFSVILFDEIEKAHPDIFNSLLQILDEGRLTDAQGRVVDFKNTVIVLTTNLGTRD 671
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I K +GF D+ +SSY ++K+ VTEELK +FRPEFLNRLDE+IVF QLT+ ++
Sbjct: 672 ISK-SVNLGFS-KADDVESSYEKMKAKVTEELKGHFRPEFLNRLDEIIVFHQLTQPDILR 729
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I D+M+ ++ DRL KD+ ++VT +E + G++P GARPLRR I R +ED +AEK+
Sbjct: 730 IVDLMVGQLEDRLADKDMGIEVTPAAKELLSTRGFDPLLGARPLRRTIQRDIEDVLAEKI 789
Query: 808 LAREIKEGDSVIVDVDSDGN 827
L E+K G V+VD +G+
Sbjct: 790 LFGEVKPGQIVVVDAAPEGS 809
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EA+ L HNYIG+EHLLLGL+ EGEGVAA+ LE+L +R
Sbjct: 1 MFERFTDRARRVVVLAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVR 60
Query: 151 TQVIRMVGEST 161
QV ++G T
Sbjct: 61 AQVEEIIGHGT 71
>gi|212716932|ref|ZP_03325060.1| hypothetical protein BIFCAT_01876 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660217|gb|EEB20792.1| hypothetical protein BIFCAT_01876 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 858
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/742 (55%), Positives = 562/742 (75%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL + + +R+ I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATI 139
Query: 155 RMV-GESTE---------AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G S + A GV + L+++G NLT A GKLDPV+GR
Sbjct: 140 DLIRGNSGDGKGDGKGDLANAGGVQDRRNQTGSAILDQFGRNLTAEAAAGKLDPVIGRSS 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPSIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL +AA+LS +YI DR LPDKAIDLIDEAG+R+R+R P E +EL+ ++ ++ +EK
Sbjct: 380 DGALQAAAELSSRYIQDRHLPDKAIDLIDEAGARLRIRRLTAPPELKELDTKIAKLAEEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+++++ QDFEKA ELRD++ L+A+ K KE S E E+ DV VV E I ++S
Sbjct: 440 DQSIKDQDFEKAAELRDKQEKLEAE-----RKQKESSWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
TGIPV K++ ES +L+ ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP SF
Sbjct: 494 QTTGIPVFKLTQAESKKLMTMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAK LA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGAN-TESSYQRMKDQVSAELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDVEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L E+++G V VD + +G
Sbjct: 792 EKILMGELEDGQRVKVDAEGEG 813
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REG+GVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKALASKGVTLDDTR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|282850309|ref|ZP_06259688.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ATCC 17745]
gi|282579802|gb|EFB85206.1| negative regulator of genetic competence ClpC/MecB [Veillonella
parvula ATCC 17745]
Length = 815
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/826 (50%), Positives = 583/826 (70%), Gaps = 41/826 (4%)
Query: 35 MMSYMQPSASRISSFSGLRRSNALDTFTCDFHSTVAVSLSSRRGKSGRAG------GFVV 88
MM A R+ S L + AL+ D+ T V + + K+G A G V
Sbjct: 1 MMQRFTDDAQRVLS---LAQEAALE-LGHDYVGTEHVLIGLTKVKNGVAAKALEELGLVT 56
Query: 89 KAMFE-------RFTEKAIKVIM---------LAQEEARRLGHNYIGSEHLLLGLLREGE 132
+ +FE R +KA + M LA + A + HNY+G+EH+LLGLL +G
Sbjct: 57 EDIFEAVEEHVGRGNKKATSIYMTPRVKHVLELAIQVANHMNHNYVGTEHILLGLLSDGS 116
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
GVA +L ++ +++ + ++G + + G G +S N + L ++ T+L + A+
Sbjct: 117 GVAVAILRSMNIRSNDVVEAIRSILGSNKGSNNGGQEGINSNNDLGELSDFATDLNESAK 176
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI + +VP+ +
Sbjct: 177 QGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTDNVPEILR 236
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++I+L +G L+AG KYRGEFEERLKK ++E++Q D++I+FIDE+HTL+GAGA EG +D
Sbjct: 237 NKRIISLSIGSLLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGTMD 296
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARGE Q IGATTLDEY+K+IEKD ALERRFQPV+V EP+ ++ ++ILKGLR
Sbjct: 297 AANILKPALARGEFQVIGATTLDEYKKYIEKDAALERRFQPVQVGEPNEEDALEILKGLR 356
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HK + TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR++ + +
Sbjct: 357 DRYEAFHKAKITDEALTAAVSLSSRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKA 416
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
LE L + KEK AV QDFEKA +LRD E L +I DK K ++K E D
Sbjct: 417 LEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQSLLKEIG---DK-KSIAK---EKSDQKL 469
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
+VTE DI +V+ WTGIPV K++ +ES LL +EE LHKRV+GQDEAV A+++A+RRAR
Sbjct: 470 IVTEEDIAAVVAQWTGIPVVKIAEEESATLLHLEEELHKRVVGQDEAVTAVAKAVRRARA 529
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+
Sbjct: 530 GLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGA 589
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF
Sbjct: 590 PPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDF 649
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGF------DLDYDE-KDSSYNRIKSLVTEELKQYFRP 725
+NT++IMTSN+G+ + K +GF D + DE K + K V + +K++FRP
Sbjct: 650 RNTVIIMTSNLGAKALHKNLPELGFLAAKKSDSNVDENKGIDFKEAKKSVMDAVKRHFRP 709
Query: 726 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPS 785
EFLNR+DEMIVF LT+ ++K+I I++ +V RL+ +D++L+++ + +V+EG + +
Sbjct: 710 EFLNRIDEMIVFHPLTEEDLKKIVTILMSDVTKRLEERDLQLEISPEAMQLLVKEGSDFT 769
Query: 786 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV-DSDGNVTV 830
GARPL+RAI RL+ED +++ +L + KEG + D D+D V++
Sbjct: 770 MGARPLKRAIQRLIEDPVSDLILKGDAKEGKIIKADAKDNDLVVSI 815
>gi|345858493|ref|ZP_08810886.1| negative regulator of genetic competence clpC/mecB
[Desulfosporosinus sp. OT]
gi|344328512|gb|EGW39897.1| negative regulator of genetic competence clpC/mecB
[Desulfosporosinus sp. OT]
Length = 813
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/740 (56%), Positives = 562/740 (75%), Gaps = 16/740 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T + +V+ LA EE R NYIG+EHLLLGL+ EGEG+AAR+L NL P + QV+
Sbjct: 79 LTPRVKRVLELANEETHRQDVNYIGTEHLLLGLIMEGEGIAARILANLNVSPEKVWKQVV 138
Query: 155 RMVGESTE--AVGAGVGGGSSGN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++G + A+ A S+ N P L E+G +LT A E +LDPV+GR+ +IER
Sbjct: 139 KLLGGELDESAIPAPNPISSTKNAGPANTPALNEFGRDLTVQAREARLDPVIGREKEIER 198
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+Q+L RRTKNNP LIGEPGVGKTAIAEGLAQ I VP+ + K+VITLD+ +VAG+
Sbjct: 199 VIQVLSRRTKNNPALIGEPGVGKTAIAEGLAQSIIGNKVPEILLNKRVITLDLSAMVAGS 258
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFEERLKK+MEEI+ IILFIDE+HTLIGAGAAEGAIDAANILKP+LARGELQC
Sbjct: 259 KYRGEFEERLKKVMEEIRADGNIILFIDELHTLIGAGAAEGAIDAANILKPALARGELQC 318
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK+IEKD ALERRFQP+ V EP+V+E I+IL GL +RYE HH+++ TDEA+
Sbjct: 319 IGATTLEEYRKYIEKDSALERRFQPITVDEPTVEEAIRILHGLCDRYEAHHRVKITDEAI 378
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+AA+LS +YISDRFLPDKAIDL+DEA SRVRL P + + LE+E ++ KEK AV
Sbjct: 379 EAAARLSDRYISDRFLPDKAIDLMDEAASRVRLASFTAPPDLKLLEEEAERLKKEKEAAV 438
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
Q+FEKA ++RD+E L+ +++ + + + E+ VT DI IV++WTG
Sbjct: 439 SSQEFEKAAQIRDQEHKLRVELAGQREAWENLRYKESAQ------VTADDIAQIVASWTG 492
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IPV+K++ +ES+RLL +EE LH+R+IGQ++AV A++RA+RRAR GL++P RPI SFIF G
Sbjct: 493 IPVKKLAQEESERLLHLEEILHQRLIGQEDAVTAVARAVRRARAGLRDPKRPIGSFIFLG 552
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+EL +ALA FG E+A+IR+DMSE+ME+H VS+L+G+PPGY+G+ EGGQLTE+
Sbjct: 553 PTGVGKTELGRALAEAMFGDEKALIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTES 612
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VRR+PY+VVL DEIEKAHP+VFN++LQ+LEDGRLTD+KGRTVDF+NT++IMTSNVGSS +
Sbjct: 613 VRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDTKGRTVDFRNTVIIMTSNVGSSFL 672
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
+K +GF DEK + Y + V ELK+ FRPEFLNR+DE++VF L + +++I
Sbjct: 673 KKEA--MGFAPKKDEK-ADYKNMHGQVMAELKRTFRPEFLNRIDELVVFHALQEEHLEKI 729
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
+I++ ++ RL ++L++ + + +EG +P +GARPLRRAI RL+ED+++EK+L
Sbjct: 730 TEILMSQMNKRLGEHGLKLEIEKSATLLIAKEGNDPVFGARPLRRAIQRLIEDALSEKIL 789
Query: 809 AREIKEGDSVIVDVDSDGNV 828
E K+GD++ V+ + DG +
Sbjct: 790 EGEFKDGDTIGVEAE-DGKM 808
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M R+TE+A KV+ +A EA+R+GH +G+EH+LLGL++EGEG+AA+ L +G D IR
Sbjct: 1 MKRRYTERAEKVLTIAHSEAKRMGHQVVGTEHILLGLIQEGEGIAAQALTGMGLDLDKIR 60
Query: 151 TQVIRMVG 158
QV ++ G
Sbjct: 61 GQVEQIAG 68
>gi|227834051|ref|YP_002835758.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|262183463|ref|ZP_06042884.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|227455067|gb|ACP33820.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
Length = 925
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/758 (54%), Positives = 564/758 (74%), Gaps = 41/758 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLTKLGADLPRVRQQVI 139
Query: 155 RMVG--ESTEAVG----------------------AGVGGGSSGNKMPTLEEYGTNLTKL 190
+++ E E G G G N + L+++G NLT+
Sbjct: 140 QLLSGYEGNEGEGNQSQGGAGPVGAGAGAGPGGRGGPGGSGERSNSL-VLDQFGRNLTQA 198
Query: 191 AEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDT 250
A +GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T
Sbjct: 199 ARDGKLDPVVGRDSEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPET 258
Query: 251 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 310
++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGA
Sbjct: 259 LKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGA 318
Query: 311 IDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKG 370
IDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPVKV EPS+D+TI ILKG
Sbjct: 319 IDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVKVEEPSLDDTILILKG 378
Query: 371 LRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 430
LR++YE HH++ YTDEAL +AA LS +YI+DRFLPDKA+DL+DEAG+R+R++ PE
Sbjct: 379 LRDKYEAHHRVSYTDEALKAAASLSDRYINDRFLPDKAVDLLDEAGARMRIKRMTAPEGL 438
Query: 431 RELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE--AG 488
RE++ + ++ KEK A+ QDFEKA LRD+E L G+E ++ E + +G
Sbjct: 439 REVDDRIAEVRKEKEAAIDAQDFEKAAGLRDKERKL----------GEERAEKEKQWRSG 488
Query: 489 DVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRA 546
D+ + V E I +++ WTGIPV K++ ES+RLL MEE LHKR+IGQD+AVKA+SRA
Sbjct: 489 DLEEIAEVGEEQIAEVLAHWTGIPVLKLTEKESNRLLNMEEELHKRIIGQDDAVKAVSRA 548
Query: 547 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 606
IRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++DM EF +R T
Sbjct: 549 IRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQIDMGEFHDRFTA 608
Query: 607 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 666
S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +
Sbjct: 609 SRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLTDGQ 668
Query: 667 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRP 725
GR VDFKNT+LI TSN+G+ I K +GF ++ ++ Y R+K+ V +ELK++FRP
Sbjct: 669 GRVVDFKNTVLIFTSNLGTQDISK-AVGLGFTGSSENDAEAQYERMKNKVNDELKKHFRP 727
Query: 726 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPS 785
EFLNR+DE++VF QLT+ ++ E+ ++++ V +L +D+ +++T++ ++ + + G++P
Sbjct: 728 EFLNRIDEIVVFHQLTQEQIVEMVELLIARVEKQLSERDMGIELTQKAKDLLAQRGFDPV 787
Query: 786 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
GARPLRR I R +ED ++EK+L EI G+ + VDV+
Sbjct: 788 LGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVE 825
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 REVEEIIGQGSQ 72
>gi|422012810|ref|ZP_16359452.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
gi|394752669|gb|EJF36341.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
Length = 822
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/742 (57%), Positives = 571/742 (76%), Gaps = 17/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 80 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 139
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 140 QMLSGYQRGDDEGRESVGAGVGGSGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRTE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ +++ +LDMG LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDRQIYSLDMGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSV++TI+ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTNDEYRKYIEKDAALERRFQPVKVDEPSVEDTIEILKGLRDRYEAHHRVIITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ SAA+L+ +Y+SDRFLPDKAIDL+DEAG+R+R+R P E REL++++ ++ + K
Sbjct: 380 EAIKSAAELADRYVSDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEKISELRRNKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD+E L + K KE + E+ ++ VT+ +I +++
Sbjct: 440 SAIDDQDFEKAAALRDQESKLGEE-----RKAKEAAWKGGESDEIAE-VTDHEIAEVLAM 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LL+ME+ LHKRVIGQDEAVKA+S++IRR R GLK+PNRP SFI
Sbjct: 494 STGIPVVRLTQTETSKLLRMEDELHKRVIGQDEAVKALSQSIRRTRSGLKDPNRPGGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 554 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF + + Y R+KS V+EELKQ+FRPEFLNR+D+ +VF L K E+
Sbjct: 674 RDINK-GVLTGFQ-SSEHQTHDYARMKSKVSEELKQHFRPEFLNRVDDTVVFPPLQKDEI 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
K+I D+M+ ++ R++ +D+ LQ+++ RE + + G++P GARPLRRAI R +EDS++E
Sbjct: 732 KQIVDLMIAKLAKRMEAQDMHLQLSDGAREFLADLGFDPVLGARPLRRAIQREIEDSLSE 791
Query: 806 KMLAREIKEGDSVIVDVDSDGN 827
++L EI+ G V V V+ +G
Sbjct: 792 RILFGEIQPGQVVTVGVEGEGK 813
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLITEGEGVAAKALETMGIKGDAVR 60
Query: 151 TQVIRMVGESTEAV 164
VI ++GE + V
Sbjct: 61 KSVIEIIGEGEKPV 74
>gi|296392867|ref|YP_003657751.1| ATPase AAA [Segniliparus rotundus DSM 44985]
gi|296180014|gb|ADG96920.1| ATPase AAA-2 domain protein [Segniliparus rotundus DSM 44985]
Length = 842
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/752 (55%), Positives = 559/752 (74%), Gaps = 46/752 (6%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSSGNKMP-------------------TLEEYGTNLTKLAEEGK 195
+++ G S G K P L+++G NLT+ A +GK
Sbjct: 140 QLLS-----------GYSGGGKEPEAAGAGGRGGEAGTPSTSLVLDQFGRNLTRAALDGK 188
Query: 196 LDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKK 255
LDPV+GR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I G+VP+T++ K+
Sbjct: 189 LDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQ 248
Query: 256 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 315
+ TLD+G LVAG++YRG+FEERLKK+++EI +IILFIDE+HTL+GAGAAEGAIDAA+
Sbjct: 249 LYTLDLGSLVAGSRYRGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAAS 308
Query: 316 ILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERY 375
ILKP LARGELQ IGATTLDEYRK+IEKD ALERRFQPV+V EPSV+ TI+ILKGLR+RY
Sbjct: 309 ILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRY 368
Query: 376 EIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEK 435
E HH++ TD AL +AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++
Sbjct: 369 EAHHRVSITDSALAAAASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDE 428
Query: 436 ELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVT 495
++ ++K A+ QDFEKA LRD E L AQ + + + +GD+ VV
Sbjct: 429 KIANTRRQKESAIDEQDFEKAAGLRDTEKKLVAQ--------RAEREKQWRSGDM-DVVA 479
Query: 496 EVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
EVD I +++ WTGIPV K++ +E+ RLL+ME+ LHKR+IGQ +AV A+++AIRR R
Sbjct: 480 EVDEEEIAEVLANWTGIPVFKLTEEETARLLRMEDELHKRIIGQRDAVAAVAKAIRRTRA 539
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+
Sbjct: 540 GLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGA 599
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLTD +GRTVDF
Sbjct: 600 PPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHHEIYNTLLQVLEDGRLTDGQGRTVDF 659
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS-YNRIKSLVTEELKQYFRPEFLNRL 731
KNT+LI TSN+G+S I K +G E ++S Y R+K V +ELK++FRPEFLNR+
Sbjct: 660 KNTVLIFTSNLGTSDISKA---VGLGFSSGEGNTSNYERMKQKVQDELKKHFRPEFLNRI 716
Query: 732 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 791
DE++VF QLT E+ ++ D+M+ V LK KD+E++++ + + + + G++P GARPL
Sbjct: 717 DEIVVFHQLTNEEIVKMVDLMITRVAAALKAKDMEIELSAQAKGLLAKRGFDPVLGARPL 776
Query: 792 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
RR I R +ED ++EK+L E G V+VDV+
Sbjct: 777 RRTIQREIEDQLSEKILFGEFGAGQKVLVDVE 808
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE+LG +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVR 60
Query: 151 TQVIRMVGESTEA 163
+QV ++G+ +
Sbjct: 61 SQVEEIIGQGQQG 73
>gi|227540962|ref|ZP_03971011.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183222|gb|EEI64194.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 870
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/780 (54%), Positives = 575/780 (73%), Gaps = 34/780 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAARVL LGAD +R VI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLVREGEGVAARVLVKLGADLPRVRQTVI 139
Query: 155 RMV--------GESTEAVGAG---------------VGGGSSGNKMPTLEEYGTNLTKLA 191
+++ GE+ E G +GG + TL+++G NLT+LA
Sbjct: 140 QLLSGYEGQQGGEAPEGNGLAGAGAAPGGGAFGGRQMGGPGERSNSLTLDKFGRNLTQLA 199
Query: 192 EEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTI 251
++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T+
Sbjct: 200 KDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGRVPETL 259
Query: 252 EGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAI 311
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HT++GAGAAEGAI
Sbjct: 260 RDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTIVGAGAAEGAI 319
Query: 312 DAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 371
DAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV++TIQILKGL
Sbjct: 320 DAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEDTIQILKGL 379
Query: 372 RERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR 431
R+RYE HH++ TD AL +AA LS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R
Sbjct: 380 RDRYEAHHRVSITDGALAAAASLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPEGLR 439
Query: 432 ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE-TEAGDV 490
E+++ + ++ EK A+ QDFEKA LRD E L + + +K K+ E E +V
Sbjct: 440 EIDERIAKVRGEKEAAIDAQDFEKAAGLRDNERKLTEERA---EKEKQWRNGELQEIAEV 496
Query: 491 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
G E I +++ WTGIPV K++ +ES RL+ ME+ LHKR+IGQ++AVKA+SRAIRR
Sbjct: 497 G----EEQIAEVLANWTGIPVFKLTEEESSRLIHMEDELHKRIIGQEDAVKAVSRAIRRT 552
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+PNRP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF ++ T S+L
Sbjct: 553 RAGLKDPNRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQIDMGEFHDKFTASRLF 612
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 613 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 672
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + + D+ Y R+K VT+ELK++FRPEFLN
Sbjct: 673 DFKNTVLIFTSNLGTQDISK-AVGMGFTANNETDDDAKYERMKDKVTDELKKHFRPEFLN 731
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF+QLT+ ++ ++ D++ V L+ KD+ L++TE+ + + + G++P GAR
Sbjct: 732 RIDEIVVFKQLTREQIVQMVDLLTARVAKMLREKDMGLEITEKAKNLLAKRGFDPVLGAR 791
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLPVV 848
PLRR I R +ED+++EK+L E+ G+ V VDVD DG + ++ PLP V
Sbjct: 792 PLRRTIQREIEDALSEKILFGEVGAGEIVTVDVDGWDGESEDTDKATFTFTPKPKPLPGV 851
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G ++
Sbjct: 61 KEVEELIGPGSQ 72
>gi|309790848|ref|ZP_07685392.1| ATPase [Oscillochloris trichoides DG-6]
gi|308227135|gb|EFO80819.1| ATPase [Oscillochloris trichoides DG6]
Length = 840
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/738 (56%), Positives = 543/738 (73%), Gaps = 12/738 (1%)
Query: 93 ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 152
+ T +A KVI A EEA RL H+YIG+EHLLLGL+R GEGVA VL+ +G +R Q
Sbjct: 81 QELTARAQKVIKYAIEEANRLNHHYIGTEHLLLGLVRNGEGVATGVLDIMGVSLEQVRNQ 140
Query: 153 VIRMVGESTEAVGAGVGGGSS-----GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
V+R++ T G ++ +K P L+ GT+LT +AE G+LDP++GRQ +IE
Sbjct: 141 VMRVLRHGTAGTTEQRGATTTPAAQRQSKTPYLDALGTDLTDMAEAGRLDPIIGRQHEIE 200
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+QIL RRTKNNP LIGEPGVGKTAI EGLAQRI GDVPD+I+GK+V+TLDMG LVAG
Sbjct: 201 RVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIIQGDVPDSIKGKRVVTLDMGALVAG 260
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
TKYRG+FEERLK++++EIK++ ILFIDE HT+IGAG AEG +DAANILKP+L+RGELQ
Sbjct: 261 TKYRGQFEERLKRVIDEIKET-RCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGELQ 319
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRK+IE+D ALERRFQPV V EPS+++T+ IL+G++ RYE H+L+ +DEA
Sbjct: 320 TIGATTLDEYRKYIERDAALERRFQPVMVDEPSLEDTVLILRGIKSRYEDFHQLQISDEA 379
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ +AA LS +Y+ DR LPDKAIDLIDEA SRVR+ + P + R+ + L + KE+ A
Sbjct: 380 IKAAAALSARYVPDRQLPDKAIDLIDEAASRVRMYRSATPPQLRDALRGLEALRKEREAA 439
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ + ++ A ++RDRE +S + D +++ +A E P VTE DI +V WT
Sbjct: 440 IEDKQYDLASDMRDRE---DRMLSRIADIERQIGEAGGERTVERPYVTEEDIAEVVGMWT 496
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV ++ DE+ RL++ME LH RVIGQ EAV IS+A+RRAR GLK+P RPI SFIF
Sbjct: 497 GIPVTRLKGDETIRLMQMENFLHGRVIGQQEAVVTISKAVRRARAGLKDPKRPIGSFIFL 556
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAK LA + FG+EE++I++DMSEF ERHT S+L+GSPPGYVGY EGGQLT+
Sbjct: 557 GPTGVGKTELAKTLAEFMFGAEESLIKIDMSEFQERHTTSRLVGSPPGYVGYGEGGQLTD 616
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
AVRR+PY+VVLFDEIEKAHPD FN++LQ+LEDG LTD KGR VDF+NT++IMTSNVG+
Sbjct: 617 AVRRKPYSVVLFDEIEKAHPDAFNLLLQVLEDGHLTDGKGRKVDFRNTIIIMTSNVGTEH 676
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I + RIGF ++ D N ++ V + LK FRPEFLNR+D I+F LT E+ +
Sbjct: 677 IRRAS-RIGFGGPANDIDQ--NDMRRKVDDALKTLFRPEFLNRIDATIIFHPLTTEEIHQ 733
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I IMLK V +L+ I + V + + + GY+P++GARPLRR I L+ED +AE +
Sbjct: 734 ITGIMLKRVQKQLEDHQITIDVRRDALDLLAKRGYDPAFGARPLRRIITNLIEDPLAEGL 793
Query: 808 LAREIKEGDSVIVDVDSD 825
L+ + GD+VI+D + D
Sbjct: 794 LSGRFQNGDAVIIDTEED 811
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
++ +FT++A +V+ LA EEAR H YIG+EH+LLGL+RE EG+AARVL++LG + R
Sbjct: 4 LYSKFTKRAKQVLQLATEEARSFNHPYIGTEHILLGLIRESEGIAARVLDDLGVKLAQAR 63
Query: 151 TQVIRMVG 158
+ V +VG
Sbjct: 64 SAVEFIVG 71
>gi|451945151|ref|YP_007465787.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451904538|gb|AGF73425.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 884
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/769 (53%), Positives = 562/769 (73%), Gaps = 59/769 (7%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 59 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLTKLGADLPRVRQQVI 118
Query: 155 RMVGESTEAVGAGVGGGSSGNKMP-----------------------------------T 179
+++ +G GG N
Sbjct: 119 QLL--------SGYEGGQGSNPESPQGGGQGGGPIGAGTGAARGGQAGQGGAGERSNSLV 170
Query: 180 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 239
L+++G NLT+ A++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA
Sbjct: 171 LDQFGRNLTQAAKDGKLDPVVGRGKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLA 230
Query: 240 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 299
I +G VP+T++ K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+H
Sbjct: 231 LDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIH 290
Query: 300 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 359
TL+GAGAAEGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEP
Sbjct: 291 TLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEP 350
Query: 360 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 419
SV+ +++ILKGLR++YE HH++ TD AL +AAQL+ +YI+DRFLPDKA+DLIDEAG+R+
Sbjct: 351 SVELSVEILKGLRDKYEAHHRVSITDGALTAAAQLADRYINDRFLPDKAVDLIDEAGARM 410
Query: 420 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 479
R++ PE RE+++ + + +EK A+ QDFEKA LRD+E L G+E
Sbjct: 411 RIKRMTAPEGLREIDERIADVRREKEAAIDAQDFEKAAGLRDKERKL----------GEE 460
Query: 480 MSKAETE--AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIG 535
S+ E + +GD+ + V E I ++ AWTGIPV K++ ES+RLL ME+ LHKR+IG
Sbjct: 461 RSEKEKQWRSGDLEEIAEVGEEQIAEVLGAWTGIPVFKLTESESNRLLNMEDELHKRIIG 520
Query: 536 QDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRL 595
QD+AVKA+SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++
Sbjct: 521 QDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQI 580
Query: 596 DMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQ 655
DM E+ +R T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ
Sbjct: 581 DMGEYHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 640
Query: 656 ILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSL 714
+LEDGRLTD +GR VDFKNT+LI TSN+G+ I K +GF + + D+ Y+R+K+
Sbjct: 641 VLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISK-AVGMGFTGSNETDSDAQYDRMKNK 699
Query: 715 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 774
V +ELK++FRPEFLNR+DE++VF QLT+ ++ + ++++ V L KD+ +++T++ +
Sbjct: 700 VNDELKKHFRPEFLNRIDEIVVFHQLTREQIVAMVELLIGRVSKALAEKDMAVELTDKAK 759
Query: 775 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
+ + G++P GARPLRR I R +ED+M+EK+L E+ G+ V VDV+
Sbjct: 760 NLLAKRGFDPVLGARPLRRTIQREIEDTMSEKILFGELGAGEIVTVDVE 808
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 113 LGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTE 162
L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R +V ++G ++
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGHGSQ 51
>gi|119025591|ref|YP_909436.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
adolescentis ATCC 15703]
gi|118765175|dbj|BAF39354.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium adolescentis ATCC 15703]
Length = 864
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/742 (54%), Positives = 565/742 (76%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+ EGEGV +VL + + +R+ I
Sbjct: 80 FTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVGTQVLIKMDVNLGELRSATI 139
Query: 155 RMV-GESTEAVGAGVG-----GGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G S++ G GG + T L+++G NLT A GKLDPV+GR
Sbjct: 140 DLIRGNSSDGKNDSKGELANAGGVQDRRNQTGSAILDQFGRNLTAEAAAGKLDPVIGRSN 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G +
Sbjct: 200 EIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAGDVPETLKGKQVYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 VAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++V EP++ ETI+ILKGLRERYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRERYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL +AA+LS +YI DR LPDKAIDLIDEAG+R+R+R P E +EL+ + ++ +EK
Sbjct: 380 DGALQAAAELSSRYIQDRHLPDKAIDLIDEAGARLRIRRLTAPPELKELDAKAAKLAEEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
++A++ QDFEKA ELRD++ ++++ K KE + E E+ DV VV E I ++S
Sbjct: 440 DQAIKDQDFEKAAELRDKQEKIESE-----RKEKESAWREGES-DVKMVVDEDVIAEVIS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
TGIPV K++ ES +L+ ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP SF
Sbjct: 494 QTTGIPVFKLTQAESKKLMGMESELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPAGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F E+A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF+L + +SSY R+K V+ ELKQ FRPEFLNRLD++IVF+QLT+ +
Sbjct: 674 TRDIAKAA-NTGFNLGTN-TESSYQRMKEQVSAELKQQFRPEFLNRLDDIIVFKQLTEPQ 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K++ DRL + + L++T+ ++ + ++G++P GARPLRR I R +ED+++
Sbjct: 732 VRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L ++++G V VD + +G
Sbjct: 792 EKILMGDLEDGQRVRVDAEGEG 813
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EHLLLGL+REGEGVAA+ L + G + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTR 60
Query: 151 TQVIRMVGE 159
QV M+G+
Sbjct: 61 KQVEEMIGK 69
>gi|365825915|ref|ZP_09367863.1| ATP-dependent Clp protease ATP-binding subunit [Actinomyces
graevenitzii C83]
gi|365257396|gb|EHM87440.1| ATP-dependent Clp protease ATP-binding subunit [Actinomyces
graevenitzii C83]
Length = 848
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/761 (54%), Positives = 570/761 (74%), Gaps = 30/761 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +L HNYIG+EH+LLGLLREGEGVA + L NL D + +R V+
Sbjct: 80 FTPRAKKVLELSLREALQLSHNYIGTEHILLGLLREGEGVAVQALGNLDVDLAALRQAVM 139
Query: 155 RMVG--ESTEAVGAGVG----GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+++ ++ E VG+G G SG+ + L+++G NLT+ A EGKLDPV+GR ++ER
Sbjct: 140 QLLSGYDAKETVGSGASALKEGTPSGSAI--LDQFGRNLTQAAREGKLDPVIGRSKEMER 197
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
V+QIL RRTKNNP LIGEPGVGKTA+ EGL+Q I GDVP+T+ K++ +LDMG LVAG+
Sbjct: 198 VMQILSRRTKNNPVLIGEPGVGKTAVVEGLSQAIVHGDVPETLRDKQLYSLDMGSLVAGS 257
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
+YRG+FEERLKK+++E++ +IILFIDE+HTL+ AGAAEGA+DAA+ILKP LARGELQ
Sbjct: 258 RYRGDFEERLKKVLKEVRTRGDIILFIDEIHTLVSAGAAEGAVDAASILKPMLARGELQT 317
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTL+EYRK IEKD ALERRFQPV+V +P++++ IQILKGLR+RYE H++ TDEA+
Sbjct: 318 IGATTLEEYRK-IEKDAALERRFQPVQVDQPTIEQAIQILKGLRDRYESFHRVIITDEAI 376
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+A + S +YI+DR+LPDKAIDL+DEAG+R+R+R P E RE+++ + ++ +EK A+
Sbjct: 377 EAAVKFSDRYINDRYLPDKAIDLVDEAGARLRIRRMTAPPELREIDERIAEVKREKESAI 436
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSA 505
QDFE+A LRD E L ++ +A KE + + GD+ V EVD I +++
Sbjct: 437 DAQDFERAAALRDDERRLGSERTA-----KEQA---WKNGDLDQV-AEVDENLIAEVLAM 487
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL ME LHKR++GQ++A++A+S++IRR R GLK+P RP SFI
Sbjct: 488 STGIPVVKLTEAESTKLLNMEAELHKRIVGQNKAIEALSKSIRRTRAGLKDPKRPGGSFI 547
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F E+A+I+LDMSEF E+HTVS+L G+PPGYVGY EGGQL
Sbjct: 548 FAGPTGVGKTELAKALAEFLFDDEDALIQLDMSEFAEKHTVSRLFGAPPGYVGYDEGGQL 607
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRRRP++VVLFDE+EKAHPD+FN +LQILEDG L+D++GR VDFKNT++IMT+N+GS
Sbjct: 608 TEKVRRRPFSVVLFDEVEKAHPDIFNSLLQILEDGHLSDAQGRVVDFKNTVIIMTTNLGS 667
Query: 686 SVIEKGGRRIGFDLDYDEKDS-SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I G+ + E + Y +K+ V ELKQ+FRPEFLNR+D++IVF QL+K E
Sbjct: 668 KDI---GKSVATGFQSTESGTMDYEEMKAHVNRELKQHFRPEFLNRVDDLIVFPQLSKPE 724
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+M+ + RL +++ +++T+ +E + E G++P GARPLRRA+ R +ED+++
Sbjct: 725 VRQIVDLMIARLDKRLVEQNLSIELTDAAKELLAERGFDPVLGARPLRRAVQRDIEDALS 784
Query: 805 EKMLAREIKEGDSVIVDVDSDG-----NVTVLNGSSGAPES 840
EK+L EI G ++VD +G T + G++ P++
Sbjct: 785 EKILFGEIASGSHILVDAQGEGLLGEFTFTAIPGAARLPKA 825
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE++ R
Sbjct: 1 MFERFTDRARRVVVLAQDEARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDVTLDKAR 60
Query: 151 TQVIRMVGESTEA 163
QV+ ++GE A
Sbjct: 61 AQVVEIIGEGQSA 73
>gi|320095436|ref|ZP_08027113.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977629|gb|EFW09295.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 822
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/742 (57%), Positives = 570/742 (76%), Gaps = 17/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 80 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 139
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 140 QMLSGYQRGDDEGRESVGAGVGGSGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRTE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ +++ +LDMG LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDRQIYSLDMGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSV++TI+ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTNDEYRKYIEKDAALERRFQPVKVDEPSVEDTIEILKGLRDRYEAHHRVIITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
EA+ SAA+L+ +Y+SDRFLPDKAIDL+DEAG+R+R+R P E REL++ + ++ + K
Sbjct: 380 EAIKSAAELADRYVSDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDERISELRRNKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD+E L + K KE + E+ ++ VT+ +I +++
Sbjct: 440 SAIDDQDFEKAAALRDQESKLGEE-----RKAKEAAWKGGESDEIAE-VTDHEIAEVLAM 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LL+ME+ LHKRVIGQDEAVKA++++IRR R GLK+PNRP SFI
Sbjct: 494 STGIPVVRLTQTETSKLLRMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+++LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 554 FAGPTGVGKTELAKALAEFLFGDEDALVQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF + + Y R+KS V+EELKQ+FRPEFLNR+D+ IVF L K E+
Sbjct: 674 RDINK-GVLTGFQ-SSEHQTHDYARMKSKVSEELKQHFRPEFLNRVDDTIVFPPLQKDEI 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
K+I D+M+ ++ R++ +D+ LQ+++ RE + + G++P GARPLRRAI R +EDS++E
Sbjct: 732 KQIVDLMIAKLAKRMEAQDMHLQLSDGARELLADLGFDPVLGARPLRRAIQREIEDSLSE 791
Query: 806 KMLAREIKEGDSVIVDVDSDGN 827
++L EI+ G V V V+ +G
Sbjct: 792 RILFGEIQPGQVVTVGVEGEGK 813
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLITEGEGVAAKALETMGIKGDAVR 60
Query: 151 TQVIRMVGESTEAV 164
VI ++GE + V
Sbjct: 61 KSVIEIIGEGEKPV 74
>gi|227489371|ref|ZP_03919687.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090744|gb|EEI26056.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 870
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/754 (55%), Positives = 566/754 (75%), Gaps = 33/754 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAARVL LGAD +R VI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLVREGEGVAARVLVKLGADLPRVRQTVI 139
Query: 155 RMV--------GESTEAVGAG---------------VGGGSSGNKMPTLEEYGTNLTKLA 191
+++ GE+ E G +GG + TL+++G NLT+LA
Sbjct: 140 QLLSGYEGQQGGEAPEGNGLAGAGAAPGGGAFGGRQMGGPGERSNSLTLDKFGRNLTQLA 199
Query: 192 EEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTI 251
++GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T+
Sbjct: 200 KDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGRVPETL 259
Query: 252 EGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAI 311
K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HT++GAGAAEGAI
Sbjct: 260 RDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTIVGAGAAEGAI 319
Query: 312 DAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 371
DAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV VPEPSV++TIQILKGL
Sbjct: 320 DAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEDTIQILKGL 379
Query: 372 RERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR 431
R+RYE HH++ TD AL +AA LS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R
Sbjct: 380 RDRYEAHHRVSITDGALAAAASLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPEGLR 439
Query: 432 ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE-TEAGDV 490
E+++ + ++ EK A+ QDFEKA LRD E L + + +K K+ E E +V
Sbjct: 440 EIDERIAKVRGEKEAAIDAQDFEKAAGLRDNERKLTEERA---EKEKQWRTGELQEIAEV 496
Query: 491 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
G E I +++ WTGIPV K++ +ES RL+ ME+ LHKR+IGQ++AVKA+SRAIRR
Sbjct: 497 G----EEQIAEVLANWTGIPVFKLTEEESSRLIHMEDELHKRIIGQEDAVKAVSRAIRRT 552
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+PNRP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF ++ T S+L
Sbjct: 553 RAGLKDPNRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQIDMGEFHDKFTASRLF 612
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 613 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGRLTDGQGRVV 672
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + + + D+ Y R+K VT+ELK++FRPEFLN
Sbjct: 673 DFKNTVLIFTSNLGTQDISK-AVGMGFTANNETDDDAKYERMKDKVTDELKKHFRPEFLN 731
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+DE++VF+QLT+ ++ ++ D++ V L+ KD+ L++TE+ + + + G++P GAR
Sbjct: 732 RIDEIVVFKQLTREQIVQMVDLLTARVAKMLREKDMGLEITEKAKNLLAKRGFDPVLGAR 791
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD 823
PLRR I R +ED+++EK+L E+ G+ V VDVD
Sbjct: 792 PLRRTIQREIEDALSEKILFGEVGAGEIVTVDVD 825
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G ++
Sbjct: 61 KEVEELIGPGSQ 72
>gi|237784954|ref|YP_002905659.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
gi|237757866|gb|ACR17116.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
Length = 903
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/755 (54%), Positives = 575/755 (76%), Gaps = 34/755 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLPRVRQQVI 139
Query: 155 RMVGE------------STEAVGAGVG----GGSSGNKMP------TLEEYGTNLTKLAE 192
+++ ++E GAGVG G SS N+ L+++G NLT+ A+
Sbjct: 140 QLLSGYEGQGDESQEPGTSEPAGAGVGSATLGRSSNNESGRKSNSLVLDQFGRNLTQAAK 199
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GKLDPVVGR+ +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+ ++
Sbjct: 200 DGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPEILK 259
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++ +LDMG LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HT++GAGAAEGAID
Sbjct: 260 DKQLYSLDMGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTIVGAGAAEGAID 319
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ +++ILKGLR
Sbjct: 320 AASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELSVEILKGLR 379
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+YE HH + TD ALV+AA LS +YI+DRFLPDKA+DLIDEAG+R+R++ PE R+
Sbjct: 380 PKYEAHHHVSITDAALVAAASLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPESLRK 439
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
+++++ +I K+K A+ QDFEKA LRD+E L + +E + + +G++
Sbjct: 440 VDEKIAKIRKQKEAAIDDQDFEKAAGLRDQERKLGEE--------REEKERQWRSGELED 491
Query: 493 V--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
V V E I +++ WTGIPV K++ +ESDRLL MEE LHKR+IGQ++AVK++SRAIRR
Sbjct: 492 VAEVGEEQIAEVLANWTGIPVFKLTEEESDRLLHMEEELHKRIIGQEDAVKSVSRAIRRT 551
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DMSEF ++ T S+L
Sbjct: 552 RAGLKDPRRPSGSFIFAGPSGVGKTELSKALAEFLFGEDDALIQIDMSEFHDKFTASRLF 611
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKA+ +++N +LQ+LEDGRLTD +GR V
Sbjct: 612 GAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKANNEIYNTLLQVLEDGRLTDGQGRVV 671
Query: 671 DFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+ I K +GF + +++ Y R+KS V +ELK++FRPEFLN
Sbjct: 672 DFKNTVLIFTSNLGTGDISK-AVGMGFSGVGETDEEGRYERMKSKVNDELKKHFRPEFLN 730
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+D+++VF QLT+ ++ ++ D+++ V L+ KD+++++T++ ++ + + G++P GAR
Sbjct: 731 RIDDIVVFHQLTQDQIIQMVDLLVNRVGIALRAKDMDIELTDKAKKLLAKRGFDPVLGAR 790
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS 824
PLRR I R +ED ++EK+L E+ G+ V VDV++
Sbjct: 791 PLRRTIQREIEDQLSEKILYGEVAAGELVTVDVEN 825
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 60/72 (83%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+REGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIREGEGVAAKALESMGISREAVR 60
Query: 151 TQVIRMVGESTE 162
++V ++GE ++
Sbjct: 61 SEVEDIIGEGSQ 72
>gi|320159863|ref|YP_004173087.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Anaerolinea
thermophila UNI-1]
gi|319993716|dbj|BAJ62487.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Anaerolinea thermophila UNI-1]
Length = 839
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/755 (54%), Positives = 552/755 (73%), Gaps = 27/755 (3%)
Query: 101 KVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGES 160
+V+ A EEARR+GH+YIG+EHLLLGL+R +G+ VL LG IR Q R++ ES
Sbjct: 87 QVLEYAIEEARRMGHHYIGTEHLLLGLVRSTDGLGMEVLRKLGVTAEQIRRQTRRILQES 146
Query: 161 TEA-VGAGVGGG-SSGN-----------KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+ A GA G +SG K P +++ +LT AEEGKLDPV+GRQ +IE
Sbjct: 147 SSAPTGAPAGTAPASGRPASARQEKERPKTPLVDQLAVDLTAKAEEGKLDPVIGRQMEIE 206
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+QIL RR+KNNP LIGEPGVGKTAI EGLAQRI GDVP + GK+V+ LD+G LVAG
Sbjct: 207 RVIQILARRSKNNPALIGEPGVGKTAIVEGLAQRIVEGDVPPLLLGKRVLQLDVGSLVAG 266
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
T YRG+FEERLK++++E+K S ILFIDEVH L+GAGAA ++DAANILKP+L+RGELQ
Sbjct: 267 TMYRGQFEERLKRVIDELKSSG-AILFIDEVHMLVGAGAAGSSVDAANILKPALSRGELQ 325
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRKHIE D ALERRFQP+ V EPS++ETI+ILKG++ YE HH+L TDEA
Sbjct: 326 VIGATTLDEYRKHIESDAALERRFQPIIVNEPSIEETIEILKGIKTAYEEHHRLTITDEA 385
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
L +AA+LS +Y++DRFLPDKAIDL+DEA SRVR+ + ARE+ K+LR++ + A
Sbjct: 386 LEAAAKLSARYVTDRFLPDKAIDLVDEAASRVRMYKSSAAATAREIMKKLREVRQNHALA 445
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
V + A E +RE +L+ Q+ L G + + + P VT DI +VS WT
Sbjct: 446 VEDGRMDDAQEFLEREAELEEQLERL-RTGWDRAAS--------PKVTADDIAEVVSMWT 496
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
G+PV +++T+ES+RLL MEE L K ++GQDEA+ AI++A+RRAR GLK+P RPI SFIF
Sbjct: 497 GVPVMQMATEESERLLHMEEELRKHIVGQDEAIDAIAKAVRRARAGLKDPRRPIGSFIFL 556
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+EL KALA + FGSEEA+I+LDMSEFMERHTVS+L+G+PPGYVGY E GQLTE
Sbjct: 557 GPTGVGKTELTKALARFMFGSEEALIQLDMSEFMERHTVSRLVGAPPGYVGYEEAGQLTE 616
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
A+RRRPY++V+FDEIEKAHP+ NM+LQI+E+G L+D+KG VDF+N ++IMTSN+G+ +
Sbjct: 617 AIRRRPYSIVVFDEIEKAHPEAHNMLLQIMEEGHLSDAKGHKVDFRNAIIIMTSNIGADM 676
Query: 688 IEKGGRRIGFDLDYD---EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I++ +GF L D E+ +Y ++ + + L++ FRPEF+NRLD +IVFR L +
Sbjct: 677 IKRQT-SLGFPLAKDQTKEEQEAYEDMRKKLLDSLRRVFRPEFINRLDSVIVFRALNREH 735
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+++I ++ L +V +RLK I L+ TE +++ EEGY+P GARPLRR I +ED ++
Sbjct: 736 IRQIVNLELNKVAERLKENGITLRATEAALDKLAEEGYDPEMGARPLRRVIQNKVEDRLS 795
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPE 839
+ +LA+E GD V+VD+D + N +L S +P+
Sbjct: 796 DLVLAKEFNPGDEVLVDLDPETNDIILCRSEESPQ 830
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
ERFT++A +V+ LA +EA RL + I +EHLLLGL+ E G+A RVL LG +P +R
Sbjct: 4 MERFTQRARRVLSLAHQEAERLRQDTINTEHLLLGLIEEDGGIAGRVLRELGLEPDRVRE 63
Query: 152 QVIRMVGEST 161
V R+ G T
Sbjct: 64 MVERLGGIGT 73
>gi|385801820|ref|YP_005838223.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis HMP9231]
gi|333393443|gb|AEF31361.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis HMP9231]
Length = 829
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/744 (54%), Positives = 561/744 (75%), Gaps = 22/744 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVDLGDLRSTAM 139
Query: 155 RMV------------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G+ A G SG+ + L+++G NLT AE+GKLDPV+GR
Sbjct: 140 DLIRGNSGLPEDGQKGDLANAGGVQDKRNQSGSAL--LDQFGRNLTTEAEQGKLDPVIGR 197
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G
Sbjct: 198 SKEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGDVPETLKGKQVYSLDLG 257
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
+VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LA
Sbjct: 258 SMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLA 317
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH +
Sbjct: 318 RGELQTIGATTTDEYRKYIEKDAALERRFQPIQVQEPSIAETIEILKGLRARYENHHHVT 377
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL SAA++S +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ ++++
Sbjct: 378 ITDAALQSAAEMSARYIQDRNLPDKAIDLIDEAGARLRIKRLTEPPELKELDSKISKLSE 437
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHI 502
+K+EA++ QDFEKA +LRD + L+ + K KE + E E+ +V VV E I +
Sbjct: 438 KKDEAIKNQDFEKAADLRDEQEKLEEE-----RKNKEQAWREGES-NVNMVVDEDVIASV 491
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
VS TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP
Sbjct: 492 VSNTTGIPVVKLTQAESKKLLGMEAELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSG 551
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK LA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EG
Sbjct: 552 SFIFAGPTGVGKTELAKTLAQFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEG 611
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
G+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N
Sbjct: 612 GELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTN 671
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K GF L + D+SY R+K V ELK+ FRPEFLNRLD+ IVFRQLT+
Sbjct: 672 LGTRDIAKSA-NTGFSLG-NNADASYQRMKDQVNSELKRQFRPEFLNRLDDTIVFRQLTE 729
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
EV++I D+ +K + DRL + + L++T+ + + ++G++P GARPLRR I R +ED+
Sbjct: 730 PEVRQIVDLDVKHLNDRLFERHMTLELTDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDA 789
Query: 803 MAEKMLAREIKEGDSVIVDVDSDG 826
++EK+L ++ +G+ V VD + +G
Sbjct: 790 ISEKILLGDLTDGERVEVDAEGEG 813
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REGEG+AA+ L G + N R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALNAKGVELDNTR 60
Query: 151 TQVIRMVGEST 161
Q+ M+G T
Sbjct: 61 KQIKEMIGTGT 71
>gi|357589640|ref|ZP_09128306.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
nuruki S6-4]
Length = 869
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/775 (53%), Positives = 573/775 (73%), Gaps = 40/775 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ LA EA +LGH YIG+EH+LLGL+REGEGVAA+VL LGAD S +R QVI
Sbjct: 80 FTPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVI 139
Query: 155 RMV----GESTEAVGAG-------------------VGGGSSGNKMPTLEEYGTNLTKLA 191
+++ G E+ A G N + L+++G NLT+ A
Sbjct: 140 QLLSGYEGGEPESEHASDEPAGAGVGGGDGASSGPSGKPGQKSNSL-VLDQFGRNLTQAA 198
Query: 192 EEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTI 251
++GKLDPVVGR +IER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G VP+T+
Sbjct: 199 KDGKLDPVVGRGKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKVPETL 258
Query: 252 EGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAI 311
+ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAAEGAI
Sbjct: 259 KDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAI 318
Query: 312 DAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGL 371
DAA+ILKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ T++ILKGL
Sbjct: 319 DAASILKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELTVEILKGL 378
Query: 372 RERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAR 431
R+RYE HH++ TD+AL +AA+LS +YI+DRFLPDKA+DLIDEAG+R+R++ P+ +
Sbjct: 379 RDRYEQHHRVSITDDALKAAARLSDRYINDRFLPDKAVDLIDEAGARMRIKRMTAPKSIQ 438
Query: 432 ELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE-TEAGDV 490
+++ + ++ + K A+ QDFEKA LRD E L + + +K K+ E + ++
Sbjct: 439 KVDDRIAEVRRAKEAAIDDQDFEKAASLRDDERKLTEERA---EKEKQWRAGELDDVAEI 495
Query: 491 GPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRA 550
GP +I ++ +WTGIPV +++ +ES RLL ME+ LHKR+IGQ++AVKA+SRAIRR
Sbjct: 496 GP----EEIAEVLGSWTGIPVVQLTEEESTRLLHMEDELHKRIIGQEDAVKAVSRAIRRT 551
Query: 551 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 610
R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++++I++DM EF ++ T S+L
Sbjct: 552 RAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQIDMGEFHDKFTASRLF 611
Query: 611 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 670
G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LE+GRLTD +GR V
Sbjct: 612 GAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEEGRLTDGQGRVV 671
Query: 671 DFKNTLLIMTSNVGSSVIEKG-GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 729
DFKNT+LI TSN+G+S I K G + DE ++ Y+R+K+ V +ELK++FRPEFLN
Sbjct: 672 DFKNTVLIFTSNLGTSDISKAVGMGFSGSSETDE-EAQYDRMKAKVNDELKKHFRPEFLN 730
Query: 730 RLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGAR 789
R+D+++VF QLT+ ++ ++ D++L V L+ KD+ L+V+++ ++ + G++P GAR
Sbjct: 731 RIDDIVVFHQLTQEQIVQMVDLLLGRVRTLLEEKDMALEVSDKAKQLLARRGFDPVLGAR 790
Query: 790 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DG-----NVTVLNGSSGAP 838
PLRR I +ED ++EK+L E+ G+ V VDV++ DG N + GS P
Sbjct: 791 PLRRTIQNQIEDELSEKILFGEVGAGEIVTVDVENWDGGQATENAKFVFGSKPIP 845
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 56/68 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G +R
Sbjct: 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVR 60
Query: 151 TQVIRMVG 158
T+V ++G
Sbjct: 61 TEVEDIIG 68
>gi|308235068|ref|ZP_07665805.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis ATCC 14018 = JCM 11026]
gi|311114547|ref|YP_003985768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gardnerella
vaginalis ATCC 14019]
gi|415702808|ref|ZP_11458954.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|415705433|ref|ZP_11460704.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 75712]
gi|415707392|ref|ZP_11462161.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 0288E]
gi|417556993|ref|ZP_12208048.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 315-A]
gi|310946041|gb|ADP38745.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gardnerella
vaginalis ATCC 14019]
gi|333601924|gb|EGL13358.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 315-A]
gi|388052155|gb|EIK75179.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 75712]
gi|388053354|gb|EIK76345.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|388053781|gb|EIK76745.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 0288E]
Length = 829
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/744 (54%), Positives = 561/744 (75%), Gaps = 22/744 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVDLGDLRSTAM 139
Query: 155 RMV------------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G+ A G SG+ + L+++G NLT AE+GKLDPV+GR
Sbjct: 140 DLIRGNSGLPEDGQKGDLANAGGVQDKRNQSGSAL--LDQFGRNLTTEAEQGKLDPVIGR 197
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G
Sbjct: 198 SKEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGDVPETLKGKQVYSLDLG 257
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
+VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LA
Sbjct: 258 SMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLA 317
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH +
Sbjct: 318 RGELQTIGATTTDEYRKYIEKDAALERRFQPIQVQEPSIAETIEILKGLRARYENHHHVT 377
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL SAA++S +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ ++++
Sbjct: 378 ITDAALQSAAEMSARYIQDRNLPDKAIDLIDEAGARLRIKRLTEPPELKELDSKISKLSE 437
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHI 502
+K+EA++ QDFEKA +LRD + L+ + K KE + E E+ +V VV E I +
Sbjct: 438 KKDEAIKNQDFEKAADLRDEQEKLEEE-----RKNKEQAWREGES-NVNMVVDEDVIASV 491
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
VS TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP
Sbjct: 492 VSNTTGIPVVKLTQAESKKLLGMEAELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSG 551
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK LA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EG
Sbjct: 552 SFIFAGPTGVGKTELAKTLAQFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEG 611
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
G+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N
Sbjct: 612 GELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTN 671
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K GF L + D+SY R+K V ELK+ FRPEFLNRLD+ IVFRQLT+
Sbjct: 672 LGTRDIAKSA-NTGFSLG-NNADASYQRMKDQVNSELKRQFRPEFLNRLDDTIVFRQLTE 729
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
EV++I D+ +K + DRL + + L++T+ + + ++G++P GARPLRR I R +ED+
Sbjct: 730 PEVRQIVDLDVKRLNDRLFERHMTLELTDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDA 789
Query: 803 MAEKMLAREIKEGDSVIVDVDSDG 826
++EK+L ++ +G+ V VD + +G
Sbjct: 790 ISEKILLGDLTDGERVEVDAEGEG 813
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REGEG+AA+ L G + N R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALNAKGVELDNTR 60
Query: 151 TQVIRMVGEST 161
Q+ M+G T
Sbjct: 61 KQIKEMIGTGT 71
>gi|298253965|ref|ZP_06977552.1| ATP-binding subunits of Clp [Gardnerella vaginalis 5-1]
gi|297532108|gb|EFH71083.1| ATP-binding subunits of Clp [Gardnerella vaginalis 5-1]
Length = 852
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/741 (54%), Positives = 560/741 (75%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ +
Sbjct: 69 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVDLGDLRSTTV 128
Query: 155 RMV--------GESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ E E AG V + + L+++G NLT A+EGKLDPV+GR +
Sbjct: 129 DLIRGDNAPNGSEKGELANAGSVQDKRNQSGSALLDQFGRNLTFEAQEGKLDPVIGRSEE 188
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I GDVP+T++ K+V +LD+G ++
Sbjct: 189 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVEGDVPETLKNKQVYSLDLGSMI 248
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 249 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 308
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + TD
Sbjct: 309 LQTIGATTTDEYRKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTITD 368
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL S+A+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K+
Sbjct: 369 GALQSSAELSDRYIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKKD 428
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
EA++ QDFE+A LRD + L+ + + KE + E E+ +V VV E I +VS+
Sbjct: 429 EAIKQQDFEEAANLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVSS 482
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SFI
Sbjct: 483 TTGIPVVKLTQAESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSFI 542
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F + A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 543 FAGPTGVGKTELAKALANFLFDDDNALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGEL 602
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 603 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 662
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF L + DS+Y R+K V ELK++FRPEFLNRLD+ IVFRQLT+ EV
Sbjct: 663 RDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSELKRHFRPEFLNRLDDTIVFRQLTEPEV 720
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K + DRL + + L++T+ + + ++G++P GARPLRR I R +ED+++E
Sbjct: 721 RQIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDTISE 780
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L E+ +G+ + VD + +G
Sbjct: 781 KILLGELSDGEHIKVDAEGEG 801
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 102 VIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEST 161
+I+LAQEEAR L HNYIG+EH+LLGL+REGEG+AA+ L + G R QV M+G+ T
Sbjct: 1 MIVLAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVGLEGTRKQVEEMIGKGT 60
>gi|227494485|ref|ZP_03924801.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
gi|226832219|gb|EEH64602.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
Length = 880
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/737 (57%), Positives = 558/737 (75%), Gaps = 20/737 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLGL+REGEGVA++VL LGAD + +R VI
Sbjct: 80 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVASKVLVKLGADLAELRQSVI 139
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+++ EAVG G S+ + P LE++G +LT+ A EG+LDPVVGR P+
Sbjct: 140 QLLQGYQRTGGREAVGVG---ASTPDPQPANSALLEQFGRSLTQAAREGQLDPVVGRHPE 196
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+QIL RR+KNNP LIGEPGVGKTA+ EGLAQ I +VP+T+ K++ +LDMG L+
Sbjct: 197 MERVMQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIIRNEVPETLRDKQIYSLDMGSLI 256
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +II+FIDE+HTL+GAGAAEGAIDAA +LKP LARGE
Sbjct: 257 AGSRYRGDFEERLKKILKEIKTRGDIIIFIDEIHTLVGAGAAEGAIDAAQMLKPMLARGE 316
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATTL+EYRK+IEKD ALERRFQPVKV EPSVDETI+ILKGLR+RYE HH++ TD
Sbjct: 317 LQTIGATTLEEYRKYIEKDAALERRFQPVKVEEPSVDETIEILKGLRDRYEAHHRIIITD 376
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+++AAQ++ +YI DRFLPDKAIDL+DEAG+R+R+R P E EL+ ++ + ++K
Sbjct: 377 AAIIAAAQMADRYIMDRFLPDKAIDLVDEAGARMRIRRMTAPVELHELDDKVADLRRQKE 436
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFE+A LRD E L + A KE + E +A DV + E +I +++
Sbjct: 437 SAIDDQDFERAAALRDEEKRLTEERVA-----KEKAWREGDA-DVISELGEAEIAEVLAM 490
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL MEE LH+RV+GQ++AVKAIS++IRR R GLK+P RP SFI
Sbjct: 491 STGIPVLKLTEAESHKLLNMEEALHQRVVGQEDAVKAISQSIRRTRSGLKDPKRPGGSFI 550
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F E+A+I LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 551 FAGPTGVGKTELAKALAEFLFDDEDALITLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 610
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRRRP++VVLFDE+EKAH D+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 611 TEKVRRRPFSVVLFDEVEKAHADIFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNLGT 670
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF E + Y R++ V EELKQ+FRPEFLNR+D IVF L K ++
Sbjct: 671 RDINK-GVLTGFQA-AGEMVNDYERMRQKVNEELKQHFRPEFLNRVDSTIVFPPLQKEQI 728
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+I D+M+ ++ R+ + + L++T R + ++G++P GARPLRRAI R +ED ++E
Sbjct: 729 VQIVDLMVAKLAIRMVDQGMFLEMTAAARSLLADKGFDPVLGARPLRRAIQREVEDVLSE 788
Query: 806 KMLAREIKEGDSVIVDV 822
K+L E+K G +V+VDV
Sbjct: 789 KILFGEVKTGHTVVVDV 805
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ EAR L HNYIG+EHLLLGL++EGEGVAA+ LE D +R
Sbjct: 1 MFERFTDRARRVVVLAQNEARSLNHNYIGTEHLLLGLIQEGEGVAAKALEMANVDGEQVR 60
Query: 151 TQVIRMVGESTEA 163
+I M+GE A
Sbjct: 61 ESIIEMIGEGKNA 73
>gi|238019160|ref|ZP_04599586.1| hypothetical protein VEIDISOL_01023 [Veillonella dispar ATCC 17748]
gi|237863859|gb|EEP65149.1| hypothetical protein VEIDISOL_01023 [Veillonella dispar ATCC 17748]
Length = 815
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/818 (51%), Positives = 582/818 (71%), Gaps = 42/818 (5%)
Query: 35 MMSYMQPSASRISSFSGLRRSNALDTFTCDFHSTVAVSLSSRRGKSGRAG------GFVV 88
MM A R+ SF+ + AL+ D+ T V + + K+G A G V
Sbjct: 1 MMQRFTDDAQRVLSFA---QEAALE-LGHDYVGTEHVLIGLTKVKNGVAAKALEELGIVT 56
Query: 89 KAMFE-------RFTEKAIKVIM---------LAQEEARRLGHNYIGSEHLLLGLLREGE 132
+ +FE R +KA + M LA + A R+ HNY+G+EH+LLGLL +G
Sbjct: 57 EDIFEAVEEQVGRGNKKATSIYMTPRVKHVLELAVQVANRMNHNYVGTEHILLGLLSDGG 116
Query: 133 GVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
GVA +L + +I + ++G S+ G ++ + L ++ T+L + A+
Sbjct: 117 GVAVGILRAMNIRTDDIVEAIRHILGSSSNGDDGRQEGANNNGDLGDLTDFATDLNESAK 176
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+GK+DPV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI +G+VP+ +
Sbjct: 177 QGKIDPVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGNVPEILR 236
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K++I+L +G ++AG KYRGEFEERLKK ++E++Q D++I+FIDE+HTL+GAGA EGA+D
Sbjct: 237 NKRIISLSIGSMLAGAKYRGEFEERLKKAIDEVQQHDDMIIFIDEIHTLVGAGATEGAMD 296
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AANILKP+LARGE Q IGATTLDEY+KHIEKD ALERRFQPV+V EP+ ++ ++ILKGLR
Sbjct: 297 AANILKPALARGEFQVIGATTLDEYKKHIEKDAALERRFQPVQVGEPNEEDALEILKGLR 356
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HK + TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR++ + +
Sbjct: 357 DRYEAFHKAKITDEALKAAVTLSSRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKA 416
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
LE L + KEK AV QDFEKA +LRD E L +I D K ++K E+E
Sbjct: 417 LEDRLNTVKKEKEAAVTSQDFEKAAKLRDEEQSLVKEI----DDKKSVAKEESEQ---KL 469
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
VVTE DI +V+ WTGIPV K++ +ES LL +EE LHKRV+GQD+AV A+++A+RRAR
Sbjct: 470 VVTEDDIAAVVAQWTGIPVAKIADEESQTLLHLEEELHKRVVGQDDAVTAVAKAVRRARA 529
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+P RPI SF+F GPTGVGK+ELA+ALA+ FG E AMIRLDMSE+ME+HTVS+L+G+
Sbjct: 530 GLKDPKRPIGSFLFLGPTGVGKTELARALASSLFGDESAMIRLDMSEYMEKHTVSRLVGA 589
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLT+AVRR+PY+V+L DE+EKAH D FN++LQ+L+DGRLTDS+GRTVDF
Sbjct: 590 PPGYVGYEEGGQLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDF 649
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL--------VTEELKQYFR 724
+NT++IMTSN+G+ + K +GF L + +SS N+ S+ V + +K++FR
Sbjct: 650 RNTVIIMTSNLGAKALHKNSSELGF-LAPKKSESSTNQSNSIDFKEAKKSVMDAVKRHFR 708
Query: 725 PEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNP 784
PEFLNR+DEMIVFR LT+ ++K I I++ +V RLK ++++L++T + +V+EG +
Sbjct: 709 PEFLNRIDEMIVFRPLTEEDLKHIVSILMSDVTKRLKERELQLEITSEAMQLLVKEGSDF 768
Query: 785 SYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 822
+ GARPL+RAI RL+ED +++ +L ++ EG ++ VDV
Sbjct: 769 TMGARPLKRAIQRLIEDPVSDLILKGDVTEGKTIKVDV 806
>gi|415712066|ref|ZP_11464562.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 55152]
gi|415715746|ref|ZP_11466169.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1400E]
gi|388057293|gb|EIK80125.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 55152]
gi|388058193|gb|EIK80991.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1400E]
Length = 829
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/744 (54%), Positives = 561/744 (75%), Gaps = 22/744 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVDLGDLRSTAM 139
Query: 155 RMV------------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGR 202
++ G+ A G SG+ + L+++G NLT AE+GKLDPV+GR
Sbjct: 140 DLIRGNSGIPEDGQKGDLANAGGVQDKRNQSGSAL--LDQFGRNLTTEAEQGKLDPVIGR 197
Query: 203 QPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMG 262
+IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I +GDVP+T++GK+V +LD+G
Sbjct: 198 SKEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGDVPETLKGKQVYSLDLG 257
Query: 263 LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLA 322
+VAG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LA
Sbjct: 258 SMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLA 317
Query: 323 RGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLR 382
RGELQ IGATT DEYRK+IEKD ALERRFQP++V EPS+ ETI+ILKGLR RYE HH +
Sbjct: 318 RGELQTIGATTTDEYRKYIEKDAALERRFQPIQVQEPSIAETIEILKGLRARYENHHHVT 377
Query: 383 YTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITK 442
TD AL SAA++S +YI DR LPDKAIDLIDEAG+R+R++ P E +EL+ ++ ++++
Sbjct: 378 ITDAALQSAAEMSARYIQDRNLPDKAIDLIDEAGARLRIKRLTEPPELKELDSKISKLSE 437
Query: 443 EKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHI 502
+K+EA++ QDFEKA +LRD + L+ + K KE + E E+ +V VV E I +
Sbjct: 438 KKDEAIKNQDFEKAADLRDEQEKLEEE-----RKNKEQAWREGES-NVNMVVDEDVIASV 491
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
VS TGIPV K++ ES +LL ME LHKR+IGQDEAV A+SR+IRRARVGLK+P RP
Sbjct: 492 VSNTTGIPVVKLTQAESKKLLGMEAELHKRIIGQDEAVSALSRSIRRARVGLKDPKRPSG 551
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF+GPTGVGK+ELAK LA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EG
Sbjct: 552 SFIFAGPTGVGKTELAKTLAQFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEG 611
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
G+LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N
Sbjct: 612 GELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTN 671
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
+G+ I K GF L + D+SY R+K V ELK+ FRPEFLNRLD+ IVFRQLT+
Sbjct: 672 LGTRDIAKSA-NTGFSLG-NNADASYQRMKDQVNSELKRQFRPEFLNRLDDTIVFRQLTE 729
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
EV++I D+ +K + DRL + + L++T+ + + ++G++P GARPLRR I R +ED+
Sbjct: 730 PEVRQIVDLDVKRLNDRLFERHMTLELTDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDA 789
Query: 803 MAEKMLAREIKEGDSVIVDVDSDG 826
++EK+L ++ +G+ V VD + +G
Sbjct: 790 ISEKILLGDLTDGERVEVDAEGEG 813
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REGEG+AA+ L G + + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALNAKGVELDDTR 60
Query: 151 TQVIRMVGEST 161
Q+ M+G T
Sbjct: 61 KQIKEMIGTGT 71
>gi|28493032|ref|NP_787193.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
gi|28572245|ref|NP_789025.1| Clp-family ATP-binding protease/regulator [Tropheryma whipplei
TW08/27]
gi|28410376|emb|CAD66762.1| putative Clp-family ATP-binding protease/regulator [Tropheryma
whipplei TW08/27]
gi|28476072|gb|AAO44162.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
Length = 840
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/752 (54%), Positives = 567/752 (75%), Gaps = 20/752 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGHNYIG+EH+LLG+L EGEG+AA+VL N+GA+ I+ +V+
Sbjct: 84 FTPRAKKVLELSLREALQLGHNYIGTEHILLGILHEGEGIAAQVLVNMGAELPAIQQRVM 143
Query: 155 RMVGESTE----AVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
++ + E +VG G SG+++ L+++G +LT+ A+EGKLDPV+GR+ +IERV+
Sbjct: 144 HLLEDGREQEPVSVGPSESGKISGSQI--LDQFGRHLTRAAKEGKLDPVIGREKEIERVM 201
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
Q+L RRTKNNP LIGEPGVGKTA+ E LAQ I +GDVP + K+V +LD+G L+AG++Y
Sbjct: 202 QVLSRRTKNNPILIGEPGVGKTAVVEALAQAIVNGDVPVNLRNKQVYSLDLGSLIAGSRY 261
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEERLKK+ +EI+ +II+FIDE+H+L+GAG+AEGAIDAA ILKP LARGELQ IG
Sbjct: 262 RGDFEERLKKVTKEIRSRGDIIVFIDEIHSLVGAGSAEGAIDAATILKPLLARGELQTIG 321
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTLDEYRK+IEKD ALERRFQPV V EPS+ IQILKGLR+RYE HHK++ TDEA+ +
Sbjct: 322 ATTLDEYRKNIEKDSALERRFQPVNVSEPSIPMCIQILKGLRDRYEAHHKVKITDEAIYA 381
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A LS +YI+DRFLPDKAIDLIDEAG+R+RL P + R +EK++ + K++AV
Sbjct: 382 AVTLSSRYINDRFLPDKAIDLIDEAGARLRLSVLSNPSQLRAVEKKILAVVARKDKAVEK 441
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP--VVTEVDIQHIVSAWTG 508
QDF+K GEL+ +E L+A++ + K + E G++ V E I ++++ TG
Sbjct: 442 QDFDKVGELKRKEKALRAELRKI--------KRDYENGNIASAGTVDEGLIAEVLASATG 493
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
+PV +++ DES RL+ ME +LH+RVIGQDEA+ ++SRA+RR R GLK+PNRP SFIF+G
Sbjct: 494 VPVFRLTEDESVRLMMMERSLHQRVIGQDEAISSLSRAMRRTRAGLKDPNRPSGSFIFAG 553
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELAKALA + F +E+A++ LDMSE+ ERHTVS+L G+PPG+VG+ EGGQLTE
Sbjct: 554 PTGVGKTELAKALAEFLFDNEDALVSLDMSEYGERHTVSRLFGAPPGFVGFEEGGQLTEK 613
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
+RR+P++VVLFDEIEKAHPDVFN +LQILE+GRL+D++GR VDF+NT+++MT+N+GS I
Sbjct: 614 IRRKPFSVVLFDEIEKAHPDVFNSLLQILEEGRLSDAQGRMVDFRNTIIVMTTNLGSRDI 673
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
G +GF D +Y +K+ V EEL++ +PEFLNR+DE+IVF L + E+ +I
Sbjct: 674 ASGP--VGFQ-SGDGSFLAYEAMKAKVNEELRRSLKPEFLNRIDEVIVFPPLNRDELLQI 730
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
I +K++ DRL+ + + L VT+ E++V+ GY P+ GARPLRRA+ R +ED ++EK+L
Sbjct: 731 LKIFIKKLDDRLRDRTMRLSVTDAALEQLVQIGYEPTMGARPLRRAVQREVEDRISEKIL 790
Query: 809 AREIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
EIK + +D +D N T+++ P S
Sbjct: 791 LGEIKPNQEIEMDFVND-NFTIVSRDMDYPLS 821
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT+KA +VI+LAQEEAR L HNYIG+EH+LLGL+ EG+G+AA+ LE+L R
Sbjct: 5 MFERFTDKARRVIVLAQEEARTLSHNYIGTEHVLLGLISEGDGIAAQALESLDITLERAR 64
Query: 151 TQVIRMVGESTEAVGAGV 168
V ++G A +
Sbjct: 65 EGVAELIGRGQNATSGHI 82
>gi|415709890|ref|ZP_11463469.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6420B]
gi|388055892|gb|EIK78777.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6420B]
Length = 867
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/741 (54%), Positives = 560/741 (75%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVDLGDLRSTTV 139
Query: 155 RMV--------GESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ E E AG V + + L+++G NLT A+EGKLDPV+GR +
Sbjct: 140 DLIRGDNAPNGSEKGELANAGSVQDKRNQSGSALLDQFGRNLTFEAQEGKLDPVIGRSEE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I GDVP+T++ K+V +LD+G ++
Sbjct: 200 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVEGDVPETLKNKQVYSLDLGSMI 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + TD
Sbjct: 320 LQTIGATTTDEYRKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL S+A+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K+
Sbjct: 380 GALQSSAELSDRYIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKKD 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
EA++ QDFE+A LRD + L+ + + KE + E E+ +V VV E I +VS+
Sbjct: 440 EAIKQQDFEEAANLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVSS 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SFI
Sbjct: 494 TTGIPVVKLTQAESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F + A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 554 FAGPTGVGKTELAKALANFLFDDDNALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGEL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF L + DS+Y R+K V ELK++FRPEFLNRLD+ IVFRQLT+ EV
Sbjct: 674 RDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSELKRHFRPEFLNRLDDTIVFRQLTEPEV 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K + DRL + + L++T+ + + ++G++P GARPLRR I R +ED+++E
Sbjct: 732 RKIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDTISE 791
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L E+ +G+ + VD + +G
Sbjct: 792 KILLGELSDGEHIKVDAEGEG 812
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 56/71 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REGEG+AA+ L + G D R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVDLEGTR 60
Query: 151 TQVIRMVGEST 161
QV M+G+ T
Sbjct: 61 KQVEEMIGKGT 71
>gi|283783197|ref|YP_003373951.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 409-05]
gi|283441539|gb|ADB14005.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 409-05]
Length = 862
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/741 (54%), Positives = 560/741 (75%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVDLGDLRSTTV 139
Query: 155 RMV--------GESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ E E AG V + + L+++G NLT A+EGKLDPV+GR +
Sbjct: 140 DLIRGDNAPNGSEKGELANAGSVQDKRNQSGSALLDQFGRNLTFEAQEGKLDPVIGRSEE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I GDVP+T++ K+V +LD+G ++
Sbjct: 200 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVEGDVPETLKNKQVYSLDLGSMI 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + TD
Sbjct: 320 LQTIGATTTDEYRKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL S+A+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K+
Sbjct: 380 GALQSSAELSDRYIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKKD 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
EA++ QDFE+A LRD + L+ + + KE + E E+ +V VV E I +VS+
Sbjct: 440 EAIKQQDFEEAANLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVSS 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SFI
Sbjct: 494 TTGIPVVKLTQAESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F + A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 554 FAGPTGVGKTELAKALANFLFDDDNALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGEL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF L + DS+Y R+K V ELK++FRPEFLNRLD+ IVFRQLT+ EV
Sbjct: 674 RDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSELKRHFRPEFLNRLDDTIVFRQLTEPEV 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K + DRL + + L++T+ + + ++G++P GARPLRR I R +ED+++E
Sbjct: 732 RQIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDTISE 791
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L E+ +G+ + VD + +G
Sbjct: 792 KILLGELSDGEHIKVDAEGEG 812
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 55/71 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REGEG+AA+ L + G R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVGLEGTR 60
Query: 151 TQVIRMVGEST 161
QV M+G+ T
Sbjct: 61 KQVEEMIGKGT 71
>gi|159897035|ref|YP_001543282.1| ATPase [Herpetosiphon aurantiacus DSM 785]
gi|159890074|gb|ABX03154.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus DSM 785]
Length = 837
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/755 (56%), Positives = 558/755 (73%), Gaps = 14/755 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KV A +EAR+L H YI +EH+LLGL+R EGVA VLE + +RTQV+
Sbjct: 83 LTARAKKVFEYAIDEARKLNHTYISTEHILLGLVRNAEGVATGVLEIMNVGLDQVRTQVM 142
Query: 155 RMV-----GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
RM+ G ST + AG + +K P L+ T+LT+LAE G+LDPVVGR+ +IERV
Sbjct: 143 RMMRQGVGGSSTPSPSAGGERQAKQSKTPYLDALSTDLTELAEAGRLDPVVGRKDEIERV 202
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI + DVPD+++GK+++TLDMG LVAGTK
Sbjct: 203 IQILSRRTKNNPALIGEPGVGKTAIAEGLAQRIVADDVPDSLKGKRLVTLDMGALVAGTK 262
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FEERLK++++EIK+S ILFIDE HT+IGAG AEG +DAANILKP+L+RGELQCI
Sbjct: 263 YRGQFEERLKRVVDEIKES-RCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGELQCI 321
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDE+RK+IEKD ALERRFQPV V EP+++ETI+IL+G++ RYE H+L+ DEA+
Sbjct: 322 GATTLDEFRKYIEKDAALERRFQPVMVDEPTIEETIEILRGIKTRYEDFHQLQIEDEAIT 381
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA LS +Y+ DRFLPDKAIDLIDEA SRVR+ + P R+ + L I KEK+ A+
Sbjct: 382 AAAVLSARYVPDRFLPDKAIDLIDEASSRVRMYRSATPSALRDALRGLDAIRKEKDAALE 441
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
FE +LR RE + +I+ L D+ ++ +E G P VT+ DI +V+ WTGI
Sbjct: 442 EGQFEVVQDLRVREERMLQRITDLEDEEEKTRGSEQRKGK--PYVTQEDIAEVVAMWTGI 499
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV +++++E++RL+KME+ LH+RVIGQ+E + I+RA+RRAR GLK+P RPI SFIF GP
Sbjct: 500 PVMRLASEETERLMKMEDYLHERVIGQEEPISTIARAVRRARAGLKDPKRPIGSFIFLGP 559
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ LAKALA + FGSE+A+I++DMSEF ER S+L+GSPPGYVGY EGGQLT+AV
Sbjct: 560 TGVGKTLLAKALAEFMFGSEDALIKIDMSEFQERFNTSRLVGSPPGYVGYGEGGQLTDAV 619
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RRRPY+VVLFDEIEKAHPD FN++LQ+LEDG LTD KGR VDF+NT++IMTSNVG+ I
Sbjct: 620 RRRPYSVVLFDEIEKAHPDTFNLLLQVLEDGNLTDGKGRRVDFRNTVIIMTSNVGTEQIR 679
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+G RIGF + + D R K V +ELK+ FRPEFLNR+D I+F LT +E++ IA
Sbjct: 680 RGS-RIGFGGNRNTIDVEDTRKK--VDDELKRMFRPEFLNRIDGTIIFHPLTDIEIRNIA 736
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
+ + V +L I+L VT+ + + + GY+P+YGARPLRR I ++ED +AE +L
Sbjct: 737 RLEVNRVRKQLVDHQIDLLVTDETLDLLAKRGYDPTYGARPLRRVITNMIEDGLAEGLLQ 796
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADP 844
K+GD + ++++ N VL A E L +P
Sbjct: 797 GRFKDGDKIHIELED--NEVVLRSEREAAE-LENP 828
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
+++ + +A +V+ AQEEAR H YIG+EHLLLGL+ EGEGVAARVL LG + R
Sbjct: 4 YDKMSRRAKQVMSFAQEEARAFNHPYIGTEHLLLGLILEGEGVAARVLAELGVTITKARN 63
Query: 152 QVIRMVG 158
V +VG
Sbjct: 64 AVEFIVG 70
>gi|297243559|ref|ZP_06927490.1| ATP-binding subunits of Clp [Gardnerella vaginalis AMD]
gi|296888310|gb|EFH27051.1| ATP-binding subunits of Clp [Gardnerella vaginalis AMD]
Length = 873
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/741 (54%), Positives = 560/741 (75%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEGV +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMEVDLGDLRSTTV 139
Query: 155 RMV--------GESTEAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
++ E E AG V + + L+++G NLT A+EGKLDPV+GR +
Sbjct: 140 DLIRGDNAPNGSEKGELANAGSVQDKRNQSGSALLDQFGRNLTFEAQEGKLDPVIGRSEE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
IERV+ +L RRTKNNP LIGEPGVGKTA+ EGLAQ+I GDVP+T++ K+V +LD+G ++
Sbjct: 200 IERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVEGDVPETLKNKQVYSLDLGSMI 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EIK +I+LFIDE+HT++GAG+A+GA+ A+++LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + TD
Sbjct: 320 LQTIGATTTDEYRKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
AL S+A+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K+
Sbjct: 380 GALQSSAELSDRYIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKKD 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
EA++ QDFE+A LRD + L+ + + KE + E E+ +V VV E I +VS+
Sbjct: 440 EAIKQQDFEEAANLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVSS 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV K++ ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SFI
Sbjct: 494 TTGIPVVKLTQAESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + F + A+IR+DMSEF E++ S+L G+PPGYVGY EGG+L
Sbjct: 554 FAGPTGVGKTELAKALANFLFDDDNALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGEL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K GF L + DS+Y R+K V ELK++FRPEFLNRLD+ IVFRQLT+ EV
Sbjct: 674 RDIAKAA-NTGFTLG-NNADSTYQRMKDQVNSELKRHFRPEFLNRLDDTIVFRQLTEPEV 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
++I D+ +K + DRL + + L++T+ + + ++G++P GARPLRR I R +ED+++E
Sbjct: 732 RKIVDMDVKLLNDRLFDRHMSLEITDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDTISE 791
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
K+L E+ +G+ + VD + +G
Sbjct: 792 KILLGELSDGEHIKVDAEGEG 812
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 56/71 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REGEG+AA+ L + G D R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVDLEGTR 60
Query: 151 TQVIRMVGEST 161
QV M+G+ T
Sbjct: 61 KQVEEMIGKGT 71
>gi|405982742|ref|ZP_11041053.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
gi|404389451|gb|EJZ84527.1| hypothetical protein HMPREF9451_00130 [Slackia piriformis YIT
12062]
Length = 856
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/748 (55%), Positives = 553/748 (73%), Gaps = 15/748 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
F+ + +++ + EA ++G +YI +EHLLLG++REGEG A L L +R+ +
Sbjct: 82 FSPRVKRILEHSLREAMQMGQSYISTEHLLLGIIREGEGGAIDALAKLDVSVDKVRSALN 141
Query: 155 RMVGESTEAVGAGV---GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+VG+ T V AG+ GGG + LEE+GT+LT+ A +GKLDPV+GR +IERV+Q
Sbjct: 142 DLVGQPT-PVAAGLPFFGGGEPQAESSMLEEFGTDLTEKARKGKLDPVIGRAAEIERVMQ 200
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RR KNNP LIGEPGVGKTA+ EGLAQ I + VPD I GK+V+TLD+ LVAG+KYR
Sbjct: 201 VLSRRQKNNPLLIGEPGVGKTAVVEGLAQLIVADQVPDIIRGKRVVTLDVSALVAGSKYR 260
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEERLKK+++E+ + ILFIDE+HT+IGAG+AEG+IDAA ILKP L+RGE+Q IGA
Sbjct: 261 GEFEERLKKVIKEVVKDGNTILFIDEMHTIIGAGSAEGSIDAAAILKPPLSRGEIQVIGA 320
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT++EYRKH+EKD ALERRFQ + V EP+ ++ I+IL GLR+RYE HH +R++DEAL +A
Sbjct: 321 TTIEEYRKHLEKDSALERRFQTIVVGEPNEEQAIRILDGLRDRYEAHHHVRFSDEALHAA 380
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YI DRFLPDKAID++DEAG+R+R+R+ LP+E R ++ ELR + EK EA+ Q
Sbjct: 381 VKLSNRYIQDRFLPDKAIDVLDEAGARMRIRNRVLPDEVRAIDDELRALRTEKEEAISAQ 440
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
D+E+A LRD+E D+ L + + K EA VTE +I +VS TG+PV
Sbjct: 441 DYERAASLRDKEKDI------LTRREEAEKKLSEEADRATSEVTEAEIADVVSMSTGVPV 494
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
++ E+++LL+ME LH+R+IGQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+G
Sbjct: 495 SNLTEAETEKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSG 554
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA + F SEEA+I DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+
Sbjct: 555 VGKTELSKALAEFLFNSEEALISFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQ 614
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
RPY+VVLFDEIEKAHPDVFN++LQILE+GRLTDS+GR+VDF+NT++IMTSNVG+ I +G
Sbjct: 615 RPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDSQGRSVDFRNTVIIMTSNVGAREIAQG 674
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF D + S IKS V E+K+ FRPEFLNRLDE+IVF+ LT E+ +I D+
Sbjct: 675 A-PLGFAPD-SQAGLSDKEIKSRVMSEMKKLFRPEFLNRLDEIIVFKSLTAEEIGQIVDL 732
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M+ ++ DRL +D+ + +T R+ + EEG + S GARPLRRAI RLLED +AE++L
Sbjct: 733 MVADLRDRLIAQDMTINLTPAARKHIAEEGTDTSMGARPLRRAIQRLLEDEIAEQILEGR 792
Query: 812 IKEGDSVIVDVD-SDGNVTVLNGSSGAP 838
G ++DVD DG + G P
Sbjct: 793 WHAGS--VIDVDFVDGKLVFSEGEGEIP 818
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
FE+FT+KA V++LAQEEAR L ++GSEHLLLGL +E EG+A++ LE++G
Sbjct: 3 FEKFTDKARHVLVLAQEEARSLNQPHVGSEHLLLGLAKEPEGMASQALEHVGVTYEGA-L 61
Query: 152 QVIRMVGESTEA 163
+VIR + EST A
Sbjct: 62 KVIREMNESTRA 73
>gi|294101565|ref|YP_003553423.1| ATPase AAA-2 domain-containing protein [Aminobacterium colombiense
DSM 12261]
gi|293616545|gb|ADE56699.1| ATPase AAA-2 domain protein [Aminobacterium colombiense DSM 12261]
Length = 830
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/736 (55%), Positives = 567/736 (77%), Gaps = 15/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ +A +V+ LA +EAR +G NY+G+EH+LLGLL EGEGVAA++L + G D ++ ++
Sbjct: 81 LSPRAKRVLDLAIKEARNMGVNYVGTEHVLLGLLAEGEGVAAQILLSSGVDTVIVQREIS 140
Query: 155 RMVGESTEAVG-----AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
R + + G +G G S +K PTL++ G +L++ + + +LDPV+GR +I+RV
Sbjct: 141 RFIANNEADRGVQPDLSGEGQRSLHSKTPTLDQLGIDLSEKSRKDELDPVIGRDKEIQRV 200
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNP L+G+PGVGKTAI EGLAQ+I G++ + + GKK++ L++G LVAGTK
Sbjct: 201 IQILARRTKNNPVLLGDPGVGKTAIVEGLAQKIQDGNIAEILRGKKIVQLNIGNLVAGTK 260
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFEER++KL++E++++ ++I+FIDE+H++IGAG AEGA+DAANILKPSL+RGE Q I
Sbjct: 261 YRGEFEERMRKLLKELRETGDVIIFIDEIHSIIGAGGAEGAVDAANILKPSLSRGEFQVI 320
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRK+IEKD ALERRFQPV V EPSVD+TI IL+GLR+RYE HH+++ +D+ALV
Sbjct: 321 GATTLDEYRKYIEKDAALERRFQPVMVEEPSVDDTISILEGLRDRYESHHRVKISDDALV 380
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+AA+LS +YI++RFLPDKAIDLIDEA +R RL+ ++P +++E +L ++ KEK AV
Sbjct: 381 AAARLSSRYITERFLPDKAIDLIDEAAARARLKTMEIPANLKDIEHDLEEVRKEKEAAVT 440
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
Q+FEKA LRD E + ++ +K K+ + P+V+ DI IVS WT I
Sbjct: 441 SQEFEKAARLRDTERKISEELE---EKKKDWQSRRYQE---KPLVSFDDIATIVSEWTNI 494
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV +++ +E+ RLL+MEE +H R+IGQ+EAV A++RAIRRAR G+K+P RP+ SF+F GP
Sbjct: 495 PVTQLTEEETQRLLRMEEEIHCRLIGQEEAVSAVARAIRRARSGMKDPRRPVGSFLFLGP 554
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+ELA+ LA + FGSE+AMIRLDMSEFMERH V KLIG+PPGYVGY EGG+LTEA+
Sbjct: 555 TGVGKTELARRLADFLFGSEDAMIRLDMSEFMERHEVGKLIGAPPGYVGYDEGGKLTEAI 614
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RRRPY+VVLFDEIEKAH DVFN++LQILEDGRLTD +G TVDF+N ++IMTSN+G+
Sbjct: 615 RRRPYSVVLFDEIEKAHEDVFNILLQILEDGRLTDGQGHTVDFRNAVIIMTSNIGAKDWV 674
Query: 690 KGGRRIGFDLDYDEKDS--SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
K G +GF + E D +++ KS + + +++ FRPEF+NR+DEM+VFR L+K E+
Sbjct: 675 K-GTSLGFSIS-GEADGYFDWDKTKSDILDAVQKTFRPEFINRVDEMVVFRPLSKKEMLV 732
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I DIML +V +RL+ +DI+++V+E + ++E+GYNP YGARPLRR I +L+ED MA+ +
Sbjct: 733 IVDIMLSDVRERLRYQDIDIKVSEEAKAFILEKGYNPRYGARPLRRKIQQLIEDRMADML 792
Query: 808 LAREIKEGDSVIVDVD 823
L +IK+G V +D D
Sbjct: 793 LEGKIKKGSLVSIDED 808
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M++ FTE+ KV+ LA EA R+GH+ IG+EH+LLGLL EGEGVAA+VL +LG + +R
Sbjct: 1 MWQFFTERGKKVVQLAHREALRMGHDVIGTEHILLGLLVEGEGVAAQVLNSLGVNFQEVR 60
Query: 151 TQVIRMVGE 159
Q +VG+
Sbjct: 61 RQTEELVGK 69
>gi|415728266|ref|ZP_11471839.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
gi|388065404|gb|EIK87895.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
Length = 882
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/742 (54%), Positives = 560/742 (75%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEG+ +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGIGTQVLIKMEVDLGDLRSTTV 139
Query: 155 RMV--GEST-------EAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G ST E AG V S+ + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DLIRGGSSTSSEDEKGELANAGSVQDKSNKSGSALLDQFGRNLTLEAREGKLDPVIGRSE 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ IL RRTKNNP LIG+PGVGKTA+ EGLAQ+I GDVP+T++ K++ +LD+G +
Sbjct: 200 EIERVMVILSRRTKNNPVLIGDPGVGKTAVVEGLAQKIVEGDVPETLKNKQIYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
+AG++YRG+FEERLKK+++EIK +++LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 IAGSRYRGDFEERLKKVLKEIKTRGDVVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL S+A+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K
Sbjct: 380 DGALQSSAELSDRYIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++ QDFE+A LRD + L+ + + KE + E E+ +V VV E I +VS
Sbjct: 440 DEAIKQQDFEEAANLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SF
Sbjct: 494 STTGIPVVKLTQAESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKALANFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF L + DS+Y R+K V ELK+ FRPEFLNRLD+ IVFRQLT+ E
Sbjct: 674 TRDIAKAA-NTGFTLG-NSSDSTYQRMKDQVNSELKRQFRPEFLNRLDDTIVFRQLTEPE 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K + +RL + L++T+ + + ++G+NP GARPLRR I R +ED ++
Sbjct: 732 VRQIVDMDIKLLNNRLFDHHMSLELTDAAKNLLAQKGFNPLLGARPLRRVIQRDIEDIIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L EI +G+ + VD + +G
Sbjct: 792 EKILLNEISDGERIEVDAEGEG 813
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REG+G+A++ L + G D R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGDGIASKALSSKGVDLEGAR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGAVA 73
>gi|297171669|gb|ADI22663.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0500_22O06]
Length = 827
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/767 (53%), Positives = 556/767 (72%), Gaps = 26/767 (3%)
Query: 71 VSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLRE 130
V S R+GK+ A G + +T +A KV+ A EAR H+Y+G+EHLLLGLLRE
Sbjct: 63 VEESVRKGKATIALGELP------YTSRAKKVLEFAMSEARDFNHSYVGTEHLLLGLLRE 116
Query: 131 GEGVAARVLENLGADPSNIRTQVIRMVGESTEAVG--AGVGGGSSG---------NKMPT 179
+G+AA+VL +LG R + ++++G S AG+GGG S +K P
Sbjct: 117 EKGIAAQVLNSLGVTLEKARGETLKVLGSSNTETSEPAGIGGGGSDASLRQDDKTSKTPA 176
Query: 180 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLA 239
L+ + +LT+LA + +LDP +GR+ +IERV++IL RR KNNP LIGEPGVGKTAI EGL+
Sbjct: 177 LDHFCRDLTELARKNELDPTIGRETEIERVIEILCRRKKNNPVLIGEPGVGKTAIVEGLS 236
Query: 240 QRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVH 299
Q +ASG+V D ++ +V+ LDM ++AGTKYRG+FEERLK +M EI+Q+ +ILFIDE+H
Sbjct: 237 QLVASGEVTDALKDYRVVALDMAAVIAGTKYRGQFEERLKAVMNEIQQAQTVILFIDEMH 296
Query: 300 TLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 359
TL+GAGAAEGAIDA+N+LKP+LARGELQCIGA+TL+EYRK+IEKD ALERRFQPV V P
Sbjct: 297 TLVGAGAAEGAIDASNMLKPALARGELQCIGASTLNEYRKYIEKDGALERRFQPVIVDPP 356
Query: 360 SVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRV 419
V+ET++IL+GLR YE HH++ D+ L AA+L+ +YI+DRFLPDKAID+IDEAG+R
Sbjct: 357 VVEETVEILRGLRGHYEDHHRIVIPDDTLEHAAKLADRYITDRFLPDKAIDVIDEAGARA 416
Query: 420 RLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKE 479
R+ P E L+ +L +I ++K A+ QDFE+A ELRD E + I A ++ +E
Sbjct: 417 RIASQVPPPEVEGLKDQLAEIGQKKETAIGDQDFERAAELRDEEREFSKLIRARQEEWEE 476
Query: 480 MSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEA 539
K P ++ D+ IVS WTGIPV ++ E DRL+ ME+ LHKR++GQ +A
Sbjct: 477 ERKQHR------PEISPDDVAFIVSRWTGIPVTRIRQTELDRLVHMEDELHKRIVGQQDA 530
Query: 540 VKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSE 599
++A+SRAIRR+R GLK+P RPI SFIFSGPTGVGK+EL +ALA + F EA+IR+DMSE
Sbjct: 531 IEAVSRAIRRSRAGLKDPRRPIGSFIFSGPTGVGKTELGRALAEFLFADSEALIRIDMSE 590
Query: 600 FMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILED 659
+ME+ +VS+LIG+PPGYVGY + G LT+AVRRRPY+VVL DE+EKAHPDVFN++LQ+L++
Sbjct: 591 YMEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDE 650
Query: 660 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEEL 719
G LTD+ GR +DFKNT+LIMTSN+G+ I K GR +GF + + SSY +K V E+
Sbjct: 651 GHLTDNYGRVIDFKNTVLIMTSNLGARDISK-GRGLGFQI--GDAKSSYEVMKDKVQREI 707
Query: 720 KQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVE 779
++ F PEFLNR+D+ IVF L+K E+ +I I+L +V DRL +D+ L ++E + +VE
Sbjct: 708 ERAFNPEFLNRVDDTIVFHPLSKDEIAQIVSILLADVRDRLAEEDMTLTLSEAAVQFLVE 767
Query: 780 EGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG 826
EGY+ +GARPL+RAI R LED+++EK+L E GD + VD+D G
Sbjct: 768 EGYDEKFGARPLKRAIQRFLEDALSEKILMAEFSAGDEIEVDIDPSG 814
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M FT++ KV+ +A+EEA RL H+Y+G+EH+LLGL+REG+GVA+ VL L D I
Sbjct: 1 MNYNFTDRVRKVLAMAREEAIRLQHDYVGTEHILLGLIREGDGVASAVLITLNVDLEQIH 60
Query: 151 TQVIRMV--GESTEAVG 165
V V G++T A+G
Sbjct: 61 EHVEESVRKGKATIALG 77
>gi|384914741|ref|ZP_10015493.1| Chaperone protein ClpB [Methylacidiphilum fumariolicum SolV]
gi|384527358|emb|CCG91361.1| Chaperone protein ClpB [Methylacidiphilum fumariolicum SolV]
Length = 836
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/757 (53%), Positives = 567/757 (74%), Gaps = 22/757 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T + KV+ LA +EA+ L H+Y+G+EH+LLGLLREGEGVAA +L+NL D +R +++
Sbjct: 81 YTPRVKKVLALASKEAKALNHSYVGTEHILLGLLREGEGVAATILKNLDIDLERVRNEIL 140
Query: 155 RMVGESTEAVG---------AGVGGGSSGN--KMPTLEEYGTNLTKLAEEGKLDPVVGRQ 203
+ + + A G AG +S K P L+ +G +LT+LA G+LDPV+GR+
Sbjct: 141 KELDPNFSASGEEENPEPAFAGTTETTSKKEVKTPALKAFGRDLTELARRGELDPVIGRK 200
Query: 204 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 263
+IERV+QIL RRTKNNP LIGE GVGKTAI EGLAQ IA+ +VPD + K+VITLD+ L
Sbjct: 201 NEIERVMQILCRRTKNNPVLIGEAGVGKTAIVEGLAQEIANENVPDLLRDKRVITLDLAL 260
Query: 264 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 323
+VAGTKYRG+FEER+K +MEEI+++ IILFIDE+HT++GAG+AEGA+DA+NI+KP+L+R
Sbjct: 261 MVAGTKYRGQFEERIKAVMEEIRKAKNIILFIDELHTIVGAGSAEGAMDASNIIKPALSR 320
Query: 324 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 383
GELQCIGATTL EYRK+IEKD ALERRFQ V V PSV+ETIQIL GL+ +YE HHK ++
Sbjct: 321 GELQCIGATTLSEYRKYIEKDAALERRFQTVLVEAPSVEETIQILHGLKPKYEAHHKAKF 380
Query: 384 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 443
TD+A+ +A +LS +Y++ RFLPDKAID++DEAG+R R+ P E ++LE EL I +
Sbjct: 381 TDQAIDTAVRLSDRYLTGRFLPDKAIDIMDEAGARARIAATMRPPELKDLENELLAIRAK 440
Query: 444 KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIV 503
K+E ++ Q+FEKA LRD+E +LK ++ + + K+ + E E +TE D+ IV
Sbjct: 441 KDECIKAQNFEKAAALRDKERELKEKLEQRIAEWKK-RRDEKET-----TITEDDMMQIV 494
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
S WTGIP+ +++ ++ D+ L + E L KRVIGQDEA++A+SRA++R+R LK+P RPI S
Sbjct: 495 SKWTGIPITRITQNDQDKFLNVGEELRKRVIGQDEAIEALSRALQRSRADLKDPKRPIGS 554
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIF GPTGVGK+ LAK LA Y FGS +A+I++DMSE+ME+ VS+LIGSPPGYVGY EGG
Sbjct: 555 FIFLGPTGVGKTMLAKTLAEYVFGSADALIQIDMSEYMEKFNVSRLIGSPPGYVGYEEGG 614
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
QLTE +RRRPY+VVLFDEIEKAHPDV+N++LQILEDG +TDS GR +DF+NT++IMTSNV
Sbjct: 615 QLTEKIRRRPYSVVLFDEIEKAHPDVWNILLQILEDGIVTDSLGRKIDFRNTIIIMTSNV 674
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G+ + K G +GF DE SY ++K + E +K+ F+PEFLNR+D++IVFR LT+
Sbjct: 675 GAEMGLKPG-VLGFRTKQDE--ISYEQMKERMLETVKKTFKPEFLNRVDDLIVFRSLTRE 731
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
++ +I + + +V +RLK++ + + +T+ + ++E+GY P+YGARPLRRA+ + +E+++
Sbjct: 732 DMIKIVHLEVNKVAERLKSRKLSILLTDAAIDFLIEKGYEPAYGARPLRRAVEKYVENAI 791
Query: 804 AEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPES 840
AE++L ++ E + +V++D+ + + ES
Sbjct: 792 AEELLKGKLAE--ATVVEIDAREGMLIFTPKPSQNES 826
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V+ LA++EA R GHN++G+EHLLLGL++ +GVA VL+ LG D +R ++
Sbjct: 4 FTPRAQQVLALARQEAERFGHNHVGTEHLLLGLIKLAQGVAINVLQKLGVDLETVRIEIE 63
Query: 155 RMVG 158
+ +G
Sbjct: 64 KKIG 67
>gi|306836895|ref|ZP_07469849.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
gi|304567200|gb|EFM42811.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
Length = 958
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/785 (52%), Positives = 575/785 (73%), Gaps = 45/785 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLTKLGADLPRVRQQVI 139
Query: 155 RMVG-----------ESTEAVG----------------AGVGGGSSGNKMPTLEEYGTNL 187
+++ +S +A G G G N + L+++G NL
Sbjct: 140 QLLSGYEGGQQEGGGDSNQAPGPIGAGAGSGAGAGGRGGSGGSGERSNSL-VLDQFGRNL 198
Query: 188 TKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDV 247
T+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G V
Sbjct: 199 TQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKV 258
Query: 248 PDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA 307
P+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAA
Sbjct: 259 PETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAA 318
Query: 308 EGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI 367
EGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+V EPS+D+T I
Sbjct: 319 EGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVDEPSLDDTFLI 378
Query: 368 LKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP 427
LKGLR++YE HH++ YTDEAL +AAQL+ +YI+DRFLPDKA+DL+DEAG+R+R++ P
Sbjct: 379 LKGLRDKYEAHHRVSYTDEALHAAAQLADRYINDRFLPDKAVDLLDEAGARMRIKRMTAP 438
Query: 428 EEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE- 486
+ RE++ + ++ +EK A+ QDFEKA LRD E L G+E S+ E +
Sbjct: 439 KGLREVDDRIAEVRREKEAAIDAQDFEKAASLRDDERKL----------GEERSEKEKQW 488
Query: 487 -AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAI 543
+GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+IGQDEAVK++
Sbjct: 489 RSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESSRLLNMEEELHKRIIGQDEAVKSV 548
Query: 544 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 603
SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++DM EF +R
Sbjct: 549 SRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQIDMGEFHDR 608
Query: 604 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 663
T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLT
Sbjct: 609 FTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLT 668
Query: 664 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQY 722
D +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y R+K+ V +ELK++
Sbjct: 669 DGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGASENDSDAQYERMKAKVNDELKKH 727
Query: 723 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGY 782
FRPEFLNR+D+++VF QLT+ ++ ++ ++++ V +L+ +D+ +++T++ + + + G+
Sbjct: 728 FRPEFLNRIDDVVVFHQLTREQIVQMVNLLIDRVGTQLEERDMGIELTDKAQNLLAQRGF 787
Query: 783 NPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESL 841
+P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG +G++
Sbjct: 788 DPVLGARPLRRTIQRDIEDQLSEKILFGEIGAGEIISVDVEGWDGESKDDSGATFTFTPR 847
Query: 842 ADPLP 846
PLP
Sbjct: 848 PKPLP 852
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 REVEEIIGQGSQ 72
>gi|386811802|ref|ZP_10099027.1| ATPase [planctomycete KSU-1]
gi|386404072|dbj|GAB61908.1| ATPase [planctomycete KSU-1]
Length = 826
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/716 (56%), Positives = 549/716 (76%), Gaps = 11/716 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + KV+ A EEAR LGHNYIG+EHLLLGLLRE EGVAA+VL NLG ++R +VI
Sbjct: 81 FTPRVKKVLEYAMEEARALGHNYIGTEHLLLGLLREQEGVAAQVLLNLGVKLEDVREEVI 140
Query: 155 RMVGESTEAVGAG--VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
++G GA +K P L+ +G +LT+ A E +LDPV+GRQ IERV+Q+
Sbjct: 141 GLLGSEAAQGGANQEKEEKKGKSKTPALDSFGRDLTQQAREHELDPVIGRQDVIERVIQV 200
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP L+GE GVGKTAI EGLAQ + G++P+ + ++++ LD+ ++VAGTKYRG
Sbjct: 201 LCRRTKNNPVLLGEAGVGKTAIVEGLAQAVVQGNIPELLRDRRIVALDLAMMVAGTKYRG 260
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEER+K +M E+K++ IILFIDE+HTL+GAG AEGAIDA+N+LKP+L+RGE+QCIGAT
Sbjct: 261 QFEERIKAVMSEVKRAKNIILFIDELHTLVGAGGAEGAIDASNVLKPALSRGEIQCIGAT 320
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRK+IEKD ALERRFQ + V PS ETI+ILKGLR+RYE HHK++ DEAL SAA
Sbjct: 321 TLDEYRKYIEKDGALERRFQTIVVEPPSKLETIEILKGLRDRYEAHHKVQILDEALESAA 380
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+LS +YI+ R+LPDKAID+IDEA +RVRL+ P + R +E+E+ ++ K+K+E+V QD
Sbjct: 381 ELSIRYITGRYLPDKAIDVIDEACARVRLKATTQPPDLRHIEEEINKLEKDKDESVAIQD 440
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FE+A LRD+ LK + ++ + +E ++AE E G V +E+ + +VS TGIP+
Sbjct: 441 FERAARLRDKADKLKKKKESIEKEWRE-TRAEVE----GVVNSEI-VAEVVSKMTGIPIT 494
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
++ + E+ RLL+MEE LHK VI Q+EAVKAI++AIRR+R GLKNPNRP+ASFIF GP+GV
Sbjct: 495 RIESAEAKRLLRMEEELHKMVISQEEAVKAIAKAIRRSRAGLKNPNRPVASFIFVGPSGV 554
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ LA++LA + FG EEA+I++DMSE+ME+H +S+LIG+PPGY+GY EGGQLTE +RRR
Sbjct: 555 GKTHLARSLAKFLFGEEEALIQIDMSEYMEKHNISRLIGAPPGYIGYEEGGQLTEKIRRR 614
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
PY VVL DEIEKAHPDVFNM+LQI+EDG+LTDS GR VDF+N ++IMTSN+G+ VI K
Sbjct: 615 PYAVVLLDEIEKAHPDVFNMLLQIMEDGKLTDSFGRHVDFRNVVIIMTSNIGADVI-KNQ 673
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF DE +Y+ +K + +E+ ++FRPEFLNR+D +IVF+ L K +K I +I
Sbjct: 674 ASLGFKKVTDE--HTYDTMKEQLKKEVDKHFRPEFLNRVDNIIVFKPLNKENLKNIIEIE 731
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
LK V RL++ +IE+ +++ E ++E+GYN +YGARPLRRAI LED ++E++L
Sbjct: 732 LKGVKQRLQSFNIEVTLSDDVLEFLIEKGYNQNYGARPLRRAIESYLEDPLSEEIL 787
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF+RFT++A KV+ LA+EEARR H YIG+EH+LLGL++EG GVAA VL+NL + IR
Sbjct: 1 MFDRFTDRARKVMALAREEARRFNHEYIGTEHILLGLVKEGSGVAANVLQNLDIELKKIR 60
Query: 151 TQVIRMVGESTEAVGAG 167
+V ++V ++ V G
Sbjct: 61 LEVEKIVQSGSDLVSVG 77
>gi|392374710|ref|YP_003206543.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258592403|emb|CBE68712.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 810
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/732 (55%), Positives = 553/732 (75%), Gaps = 15/732 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ A EAR LGHNYIG+EHLLLGL+REGEG+A+ VL + G ++ + Q
Sbjct: 81 FTPQAKKVLEYAISEARSLGHNYIGTEHLLLGLIREGEGIASLVLRDFGVSVASAKAQAQ 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
++GE ++ + P L+E+G +LT +A + +LDPV+GR+ +IERV+QIL
Sbjct: 141 ELLGEQA-------SKPTTSTRTPALDEFGVDLTAMARQDRLDPVIGRETEIERVIQILS 193
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGE GVGKTAI EGLAQRI + +VP+T+ K+V+ LD+ +VAGTKYRG+F
Sbjct: 194 RRTKNNPVLIGEAGVGKTAIVEGLAQRIVASNVPETLLRKRVVQLDLAGMVAGTKYRGQF 253
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLK +++EI+QS IILFIDE+HTL+GAGAAEGAIDA+++LKP+LARGELQCIGATTL
Sbjct: 254 EERLKAVVKEIQQSQSIILFIDELHTLVGAGAAEGAIDASSMLKPALARGELQCIGATTL 313
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYR+HIEKD ALERRFQ V+V PSV+ETI+IL+ +++RYE HH TDEA+ +AA+L
Sbjct: 314 DEYRRHIEKDRALERRFQAVQVGPPSVEETIRILREIKDRYEAHHCAIITDEAVTAAARL 373
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI+DRFLPDKAID+IDEAGSR RL+ LP++ RE+E E+ ++ +K +A+R Q FE
Sbjct: 374 SQRYIADRFLPDKAIDVIDEAGSRARLKTLMLPQDLREMENEVERLRAQKEDAIRTQAFE 433
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A LRD E L+ ++ KE S+A+ + +VT ++ +IVS WTGIP+ ++
Sbjct: 434 VAARLRDSERKLRTELEEKKAHWKE-SRAKEKT-----MVTAEEVAYIVSKWTGIPLYQI 487
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ES +L++ME+ L KRV+GQ EA++++SRAIRR+R G+K+P+RP+ SFIF GPTGVGK
Sbjct: 488 EEEESAKLMRMEQDLTKRVVGQIEAIESVSRAIRRSRAGIKSPSRPVGSFIFLGPTGVGK 547
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELAKALA + FG+E+A+IR+DMSE+MER + S+LIG+PPGY+GY + GQLTE VRRRP+
Sbjct: 548 TELAKALAEFLFGTEDALIRVDMSEYMERFSTSRLIGAPPGYIGYDDSGQLTEKVRRRPF 607
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+V+L DEIEKAHP+VFN++LQI EDGRLTDS GR VDFKNT+LIMTSN+G+ I
Sbjct: 608 SVILLDEIEKAHPEVFNLLLQIFEDGRLTDSYGRIVDFKNTILIMTSNIGARQIGLHT-A 666
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF DE +Y++++ V ELK+ F PE LNRLDE+IVF QL+K E+ +I D++L
Sbjct: 667 MGFAKGGDEA-VTYDKMRDTVLGELKRVFNPELLNRLDEVIVFHQLSKNELCKIVDLLLA 725
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
+ +L + I L V E +E ++ G++P+ GARPLRRAI R +ED +AE++L E
Sbjct: 726 RLQLQLAERKISLAVDESAKEFLINRGFDPTLGARPLRRAIQRYVEDRLAEEVLKGRFAE 785
Query: 815 GDSVIVDVDSDG 826
G ++ V ++ D
Sbjct: 786 GGTLRVKLEGDA 797
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 60/77 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFTE+A KVI+LA+EEA RLGHN++G+EHLLLGL+REG+G+A +L+ L + S ++
Sbjct: 1 MFERFTERARKVIILAREEAIRLGHNFVGTEHLLLGLIREGDGLAVAILKKLNVNISAVK 60
Query: 151 TQVIRMVGESTEAVGAG 167
++ ++V +E AG
Sbjct: 61 GEIEKIVSVGSEFSPAG 77
>gi|415717998|ref|ZP_11467110.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1500E]
gi|388060353|gb|EIK83047.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1500E]
Length = 879
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/742 (54%), Positives = 560/742 (75%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEG+ +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGIGTQVLIKMEVDLGDLRSTTV 139
Query: 155 RMV--GEST-------EAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G ST E AG V S+ + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DLIRGGSSTSSEDEKGELANAGSVQDKSNKSGSALLDQFGRNLTLEAREGKLDPVIGRSE 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ IL RRTKNNP LIG+PGVGKTA+ EGLAQ+I GDVP+T++ K++ +LD+G +
Sbjct: 200 EIERVMVILSRRTKNNPVLIGDPGVGKTAVVEGLAQKIVEGDVPETLKNKQIYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
+AG++YRG+FEERLKK+++EIK +++LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 IAGSRYRGDFEERLKKVLKEIKTRGDVVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL S+A+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K
Sbjct: 380 DGALQSSAELSDRYIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++ QDFE+A LRD + L+ + + KE + E E+ +V VV E I +VS
Sbjct: 440 DEAIKQQDFEEAANLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SF
Sbjct: 494 STTGIPVVKLTQAESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKALANFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF L + DS+Y R+K V ELK+ FRPEFLNRLD+ IVFRQLT+ E
Sbjct: 674 TRDIAKAA-NTGFTLG-NSSDSTYQRMKDQVNSELKRNFRPEFLNRLDDTIVFRQLTEPE 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K + +RL + L++T+ + + ++G++P GARPLRR I R +ED ++
Sbjct: 732 VRQIVDMDIKLLNNRLFDHHMSLELTDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDIIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L EI +G+ + VD + +G
Sbjct: 792 EKILLNEISDGERIEVDAEGEG 813
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REG+G+A++ L + G D R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGDGIASKALSSKGVDLEGAR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGAVA 73
>gi|395237684|ref|ZP_10415722.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|423351385|ref|ZP_17329036.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
gi|394487003|emb|CCI83810.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|404386569|gb|EJZ81723.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
Length = 925
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/776 (53%), Positives = 570/776 (73%), Gaps = 33/776 (4%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REGEGVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLQRVRQQVI 139
Query: 155 RMVG----------------------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAE 192
+++ + G G+ + LE++G NLT+ A+
Sbjct: 140 QLLSGYEGNQPEGGGEQSGGGAVGAGATMGGGRGNQSGKDKGSLV--LEQFGRNLTQAAK 197
Query: 193 EGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIE 252
+G+LDPVVGR+ +IERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLA I + VP+T++
Sbjct: 198 DGELDPVVGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNEKVPETLK 257
Query: 253 GKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAID 312
K+V +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HT++GAGAAEGAID
Sbjct: 258 DKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTMVGAGAAEGAID 317
Query: 313 AANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 372
AA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+VPEPSV+ TI++LKGLR
Sbjct: 318 AASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELTIEVLKGLR 377
Query: 373 ERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 432
+RYE HH++ TD AL +AA+LS +YISDR+LPDKA+DLIDEAG+R+R++ PE RE
Sbjct: 378 DRYEAHHRVSITDGALAAAARLSDRYISDRYLPDKAVDLIDEAGARMRIKRMTAPEGLRE 437
Query: 433 LEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGP 492
++ ++ ++ EK +A+ QDFE+A +LRD+E L + + K+ S+ + D
Sbjct: 438 IDDKIAEVRSEKEKAIDKQDFEEASKLRDKERQLTEE------RNKKDSEWRDKEADQIA 491
Query: 493 VVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARV 552
V E I ++ WTGIPV K++ +ES RLLKME+ LHKR+IGQDEAV+++SRAIRR R
Sbjct: 492 EVGEEQIAEVLGGWTGIPVLKLTEEESSRLLKMEDELHKRIIGQDEAVRSVSRAIRRTRA 551
Query: 553 GLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 612
GLK+PNRP SFIF+GP+GVGK+EL+KALA + FG E+A+I++DM EF ++ T S+L G+
Sbjct: 552 GLKDPNRPSGSFIFAGPSGVGKTELSKALAEFLFGEEDALIQIDMGEFHDKFTASRLFGA 611
Query: 613 PPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDF 672
PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +V+N +LQ+LE+GRLTD +GR VDF
Sbjct: 612 PPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEVYNTLLQVLEEGRLTDGQGRVVDF 671
Query: 673 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYD-EKDSSYNRIKSLVTEELKQYFRPEFLNRL 731
KNT+LI TSN+G+ I K +GF + ++++ Y R+KS V +ELK++FRPEFLNR+
Sbjct: 672 KNTVLIFTSNLGTGDISK-PVGMGFTGSSESDEEARYERMKSKVNDELKKHFRPEFLNRI 730
Query: 732 DEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPL 791
D+++VFRQL + E+ ++ +++++ V L +D+ +++T + + +G++P GARPL
Sbjct: 731 DDIVVFRQLGREEIVKMVELLIQRVEKMLNERDMGIELTNEAKHLLAAKGFDPVLGARPL 790
Query: 792 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESLADPLP 846
RRAI R +ED ++EK+L E+ G+ V V V++ DG + + E A PLP
Sbjct: 791 RRAIQREIEDVLSEKILFGEVGAGEIVAVGVENWDGEDKHADQARFTFEPHAKPLP 846
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 60/73 (82%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDDVR 60
Query: 151 TQVIRMVGESTEA 163
+V ++G+ +E+
Sbjct: 61 KEVEDIIGQGSES 73
>gi|291542191|emb|CBL15301.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
bromii L2-63]
Length = 821
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/746 (54%), Positives = 546/746 (73%), Gaps = 12/746 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ A + + G+ Y+G+EHLLL +L E + A LE LG + V
Sbjct: 82 FTPRTKRVLRAAVIISSKTGYTYVGTEHLLLAILSESDSYAVAFLEELGVSVERLAQAVS 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKM----PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+ + E G S+ N L+++G +LT+ A+ G++DPV+GR+ +I+RV+
Sbjct: 142 KGMQGGAEEGFGGFENESAPNGSQKGGSALDKFGRDLTQAAKNGEIDPVIGREKEIQRVI 201
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QIL RRTKNNP LIGEPGVGKTA+AEGLA IA G+VP+ ++ K+V++LD+ +VAG KY
Sbjct: 202 QILSRRTKNNPVLIGEPGVGKTAVAEGLALEIAKGNVPEILKDKRVVSLDLTGMVAGAKY 261
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RG+FEER+K ++E+K+S ILFIDE+HT++GAGAAEG+ DAANILKPSLARG+ Q IG
Sbjct: 262 RGDFEERIKAAIDEVKKSKNTILFIDELHTIVGAGAAEGSADAANILKPSLARGDFQVIG 321
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATTL+EYRK+IEKD ALERRFQPVKV EP+ ++ +QILKGLR+ YE HHK++ TDEA+ +
Sbjct: 322 ATTLNEYRKYIEKDAALERRFQPVKVGEPTPEQAVQILKGLRDSYEAHHKVKITDEAINA 381
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A LS +YI+DR+LPDKAIDLIDE S+VRL P+ +ELE E+ KEK A+
Sbjct: 382 AVTLSSRYIADRYLPDKAIDLIDEGASKVRLASLTSPDNVKELEDEIADYEKEKASAINE 441
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
QDFE+A LRD + +L+ ++ K +E K G+ G V E DI IVS WTGIP
Sbjct: 442 QDFERAARLRDEQKELQTKLDDAKKKWQEQQK-----GNSGEVTAE-DIAKIVSEWTGIP 495
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V +++ +ES+RLL ME LH+RVIGQ EAV AI++AIRR RVGLK+P RP+ SFIF GPT
Sbjct: 496 VVQLTKEESERLLNMENVLHERVIGQSEAVTAIAKAIRRGRVGLKDPKRPVGSFIFLGPT 555
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL KALA FG E AM+RLDMSE+ME+HTVSKLIGSPPGYVG+ EGGQLTE VR
Sbjct: 556 GVGKTELCKALAEAMFGDENAMLRLDMSEYMEKHTVSKLIGSPPGYVGFEEGGQLTEKVR 615
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R+PY+VVLFDEIEKAHPDVFNM+LQILEDGRLTDS+GRTVDFKNT++IMTSNVG+ +I +
Sbjct: 616 RKPYSVVLFDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVDFKNTIIIMTSNVGARLITE 675
Query: 691 GGRRIGFDLDYDEKDSSYNR-IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+GF+ + + + S + IK LVT EL++ FRPEFLNR+D++IVF +L K E+K+IA
Sbjct: 676 KQSSLGFNSENENAEESEKKDIKELVTGELRKVFRPEFLNRVDDIIVFNKLNKDEIKQIA 735
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
MLK + +RL +I++ T+ ++ ++G++ +YGARPLRRAI +ED ++E+ML
Sbjct: 736 VKMLKTLENRLDKMNIKISFTDNAVSKIADKGFDENYGARPLRRAIQNEIEDPLSEQMLE 795
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSS 835
++K+G V D +DG T ++
Sbjct: 796 GKVKDGAVVTCDF-ADGQFTFTTANA 820
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F+ FTEKA K + LA E A + HNY+G+EH+L GL++EG GVAA L G +R
Sbjct: 4 FKGFTEKANKALNLAIESAEEMRHNYVGTEHILYGLVKEGSGVAATALNECGVTEDALRE 63
Query: 152 QV 153
++
Sbjct: 64 KL 65
>gi|297171206|gb|ADI22214.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_34B24]
gi|297171322|gb|ADI22327.1| hypothetical protein [uncultured actinobacterium HF0500_01C15]
Length = 826
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/776 (53%), Positives = 556/776 (71%), Gaps = 26/776 (3%)
Query: 71 VSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLRE 130
V S R+GK+ A G + +T +A KV+ A EAR H+Y+G+EHLLLGLLRE
Sbjct: 63 VEESVRKGKATIALGELP------YTSRAKKVLEFAMAEARDFNHSYVGTEHLLLGLLRE 116
Query: 131 GEGVAARVLENLGADPSNIRTQVIRMVGEST----------EAVGAGVGGGSSGNKMPTL 180
+G+AA+VL +LG R ++++G + G +K P L
Sbjct: 117 EKGIAAQVLNSLGVTLDEAREDTLKILGSEVAPSEPAGIGGGGPASPGKKGDKKSKTPAL 176
Query: 181 EEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 240
+ + +LT+LA + KLDP +GR +IERVV+IL RR KNNP LIGEPGVGKTAI EGLAQ
Sbjct: 177 DHFCRDLTELAHKDKLDPTIGRVEEIERVVEILCRRKKNNPVLIGEPGVGKTAIVEGLAQ 236
Query: 241 RIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 300
IA G+V + ++G +V+ LDM ++AGTKYRG+FEERLK +M EI +S +ILFIDE+HT
Sbjct: 237 LIADGEVTEFLKGYRVLALDMAAVIAGTKYRGQFEERLKAVMNEIHESQTVILFIDELHT 296
Query: 301 LIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPS 360
L+GAGAAEGAIDA+N+LKP+LARGELQCIGA+TL+EYRK+IEKD ALERRFQPV V P+
Sbjct: 297 LVGAGAAEGAIDASNMLKPALARGELQCIGASTLNEYRKYIEKDGALERRFQPVIVEPPA 356
Query: 361 VDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVR 420
V+ET++ILKGLR +YE HH++ D+AL AA+L+ +YI+DRFLPDKAID+IDEAG+R R
Sbjct: 357 VEETLEILKGLRGQYEDHHRVIIPDDALQHAAKLADRYITDRFLPDKAIDVIDEAGARAR 416
Query: 421 LRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEM 480
+ P E EL+ +L +I K EA+ QDFE+A ELRD E + I D +E
Sbjct: 417 IASQVPPPEVEELKDQLSEIAARKEEAIGDQDFERAAELRDEEREFGQAIQERRDAWEEE 476
Query: 481 SKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAV 540
K P ++E ++ IVS WTG+PV ++ ESDRL+ ME+ LHKR++GQ++A+
Sbjct: 477 RKKHR------PEISEDEVAFIVSRWTGVPVTRIRQTESDRLVHMEDELHKRIVGQNDAI 530
Query: 541 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEF 600
+AISRAIRR+R GLK+P RPI SFIFSGPTGVGK+ELA+ALA + F EA++R+DMSE+
Sbjct: 531 EAISRAIRRSRAGLKDPRRPIGSFIFSGPTGVGKTELARALAEFLFADREALVRVDMSEY 590
Query: 601 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 660
ME+ +VS+LIG+PPGYVGY + G LT+AVRRRPY+VVL DEIEKAHPDVFN++LQ+L++G
Sbjct: 591 MEKFSVSRLIGAPPGYVGYEDSGALTKAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDEG 650
Query: 661 RLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELK 720
LTD+ GR +DFKNT+LIMTSN+G+ I KG G + SY+ +K V +E++
Sbjct: 651 HLTDNYGRVIDFKNTVLIMTSNLGARDISKGS---GLGFQSGDPQDSYHIMKDKVAQEIE 707
Query: 721 QYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEE 780
+ F PEFLNR+D+ IVF LTK E+ +I I++++V RLK ++I L +T+ E +VEE
Sbjct: 708 RAFNPEFLNRVDDTIVFHSLTKEEIGQIVHILMEDVRTRLKEEEISLTLTDAAIEFLVEE 767
Query: 781 GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG-NVTVLNGSS 835
GY+ +GARPLRRAI R LED ++EK+L + GD + VD++ +G +T+ GS+
Sbjct: 768 GYDEKFGARPLRRAIQRFLEDPLSEKILLADFSRGDEIEVDLNEEGRGLTLQVGSA 823
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M FT++ KV+ +A+EEA RL H+Y+G+EH+LLGL+RE E VAA+VL NL D I
Sbjct: 1 MNYNFTDRVRKVLAMAREEAIRLQHDYVGTEHILLGLIREEEAVAAQVLINLSVDLEQIH 60
Query: 151 TQVIRMV--GESTEAVG 165
+V V G++T A+G
Sbjct: 61 DRVEESVRKGKATIALG 77
>gi|227502079|ref|ZP_03932128.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Corynebacterium accolens ATCC 49725]
gi|227077234|gb|EEI15197.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium accolens ATCC 49725]
Length = 953
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/785 (52%), Positives = 575/785 (73%), Gaps = 45/785 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLTKLGADLPRVRQQVI 139
Query: 155 RMVG-----------ESTEAVG----------------AGVGGGSSGNKMPTLEEYGTNL 187
+++ +S +A G G G N + L+++G NL
Sbjct: 140 QLLSGYEGGQQEGGGDSNQAPGPIGAGAGSGAGAGGRGGSGGSGERSNSL-VLDQFGRNL 198
Query: 188 TKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDV 247
T+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G V
Sbjct: 199 TQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKV 258
Query: 248 PDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA 307
P+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAA
Sbjct: 259 PETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAA 318
Query: 308 EGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI 367
EGAIDAA++LKP LARGELQ IGATTLDEYRKHIEKD ALERRFQPV+V EPS+D+T I
Sbjct: 319 EGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVDEPSLDDTFLI 378
Query: 368 LKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP 427
LKGLR++YE HH++ YTDEAL +AAQL+ +YI+DRFLPDKA+DL+DEAG+R+R++ P
Sbjct: 379 LKGLRDKYEAHHRVSYTDEALHAAAQLADRYINDRFLPDKAVDLLDEAGARMRIKRMTAP 438
Query: 428 EEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE- 486
+ RE++ + ++ +EK A+ QDFEKA LRD E L G+E S+ E +
Sbjct: 439 KGLREVDDRIAEVRREKEAAIDAQDFEKAAGLRDDERKL----------GEERSEKEKQW 488
Query: 487 -AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAI 543
+GD+ + V E I +++ WTGIPV K++ ES RLL MEE LHKR+IGQDEAVK++
Sbjct: 489 RSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESSRLLNMEEELHKRIIGQDEAVKSV 548
Query: 544 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 603
SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++DM EF +R
Sbjct: 549 SRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQIDMGEFHDR 608
Query: 604 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 663
T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLT
Sbjct: 609 FTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLT 668
Query: 664 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQY 722
D +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y R+K+ V +ELK++
Sbjct: 669 DGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGASENDSDAQYERMKAKVNDELKKH 727
Query: 723 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGY 782
FRPEFLNR+D+++VF QLT+ ++ ++ ++++ V +L+ +D+ +++T++ + + + G+
Sbjct: 728 FRPEFLNRIDDVVVFHQLTREQIVQMVNLLIDRVGTQLEERDMGIELTDKAQNLLAQRGF 787
Query: 783 NPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESL 841
+P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG +G++
Sbjct: 788 DPVLGARPLRRTIQRDIEDQLSEKILFGEIGAGEIISVDVEGWDGESKDDSGATFTFTPR 847
Query: 842 ADPLP 846
PLP
Sbjct: 848 PKPLP 852
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 REVEEIIGQGSQ 72
>gi|415726926|ref|ZP_11471154.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Dmash]
gi|388062655|gb|EIK85260.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Dmash]
Length = 868
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/742 (54%), Positives = 560/742 (75%), Gaps = 18/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A +V+ L+ EA +LGH+YIG+EH+LLGL+REGEG+ +VL + D ++R+ +
Sbjct: 80 FTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGIGTQVLIKMEVDLGDLRSTTV 139
Query: 155 RMV--GEST-------EAVGAG-VGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
++ G ST E AG V S+ + L+++G NLT A EGKLDPV+GR
Sbjct: 140 DLIRGGSSTNSEDEKGELANAGSVQDKSNKSGSALLDQFGRNLTLEAREGKLDPVIGRSE 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERV+ IL RRTKNNP LIG+PGVGKTA+ EGLAQ+I GDVP+T++ K++ +LD+G +
Sbjct: 200 EIERVMVILSRRTKNNPVLIGDPGVGKTAVVEGLAQKIVEGDVPETLKNKQIYSLDLGSM 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
+AG++YRG+FEERLKK+++EIK +++LFIDE+HT++GAG+A+GA+ A+++LKP LARG
Sbjct: 260 IAGSRYRGDFEERLKKVLKEIKTRGDVVLFIDEIHTIVGAGSADGALGASDMLKPMLARG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
ELQ IGATT DEYRK+IEKD ALERRFQP++VPEP++ ETI+ILKGLR RYE HH + T
Sbjct: 320 ELQTIGATTTDEYRKYIEKDAALERRFQPIQVPEPTIAETIEILKGLRSRYENHHHVTIT 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL S+A+LS +YI DR LPDKAIDLIDEAG+R+R++ P E +EL ++ +I+++K
Sbjct: 380 DGALQSSAELSDRYIQDRHLPDKAIDLIDEAGARLRIKRLTQPPELKELNHKIAKISEKK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+EA++ QDFE+A LRD + L+ + + KE + E E+ +V VV E I +VS
Sbjct: 440 DEAIKQQDFEEAANLRDDQEKLENEAAE-----KEKAWREGES-NVKMVVDEDMIASVVS 493
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
+ TGIPV K++ ES +LL+ME LHKR++GQDEAV A++R+IRRARVGLK+P RP SF
Sbjct: 494 STTGIPVVKLTQAESQKLLQMESELHKRIVGQDEAVSALARSIRRARVGLKDPKRPSGSF 553
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
IF+GPTGVGK+ELAKALA + F ++A+IR+DMSEF E++ S+L G+PPGYVGY EGG+
Sbjct: 554 IFAGPTGVGKTELAKALANFLFDDDDALIRVDMSEFAEKYAASRLFGAPPGYVGYEEGGE 613
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+P++VVLFDEIEKAHPD+FN +LQ+L+DG LTD +GR VDFKNT++I+T+N+G
Sbjct: 614 LTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLG 673
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ I K GF L + DS+Y R+K V ELK+ FRPEFLNRLD+ IVFRQLT+ E
Sbjct: 674 TRDIAKAA-NTGFTLG-NSSDSTYQRMKDQVNSELKRQFRPEFLNRLDDTIVFRQLTEPE 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
V++I D+ +K + +RL + L++T+ + + ++G++P GARPLRR I R +ED ++
Sbjct: 732 VRQIVDMDIKLLNNRLFDHHMSLELTDAAKNLLAQKGFDPLLGARPLRRVIQRDIEDIIS 791
Query: 805 EKMLAREIKEGDSVIVDVDSDG 826
EK+L EI +G+ + VD + +G
Sbjct: 792 EKILLNEISDGERIEVDAEGEG 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+REG+G+AA+ L + G D + R
Sbjct: 1 MFERFTDRARRVIVLAQEEARSLQHNYIGTEHILLGLIREGDGIAAKALSSKGVDLESTR 60
Query: 151 TQVIRMVGESTEA 163
QV M+G+ A
Sbjct: 61 KQVEEMIGKGAVA 73
>gi|383807762|ref|ZP_09963321.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
gi|383298505|gb|EIC91121.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
Length = 825
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/729 (55%), Positives = 542/729 (74%), Gaps = 11/729 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ EA +LGH+YIG+EHLLLGL+REGEGVAA+VL LGAD + +R QVI
Sbjct: 85 FTPRAKKVLELSLREALQLGHSYIGTEHLLLGLIREGEGVAAQVLTKLGADTNKVRQQVI 144
Query: 155 RMVG--ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
+++ + E+V G L++YG NLT A EGKLDPVVGR+ + ERV+QI
Sbjct: 145 QLLSGYQGKESVSVGGEAQPQAKGSTILDQYGRNLTHAAAEGKLDPVVGREKETERVMQI 204
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RRTKNNP LIGEPGVGKTA+ EGLA I +G+VP+T+ GK++ TLDMG L+AG++YRG
Sbjct: 205 LSRRTKNNPILIGEPGVGKTAVVEGLAIAIVAGNVPETLRGKQLYTLDMGSLIAGSRYRG 264
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
+FEERLKK+ +EI+ +II FIDE+HTL+GAGAAEGAIDAA+ILKP LARGELQ IGAT
Sbjct: 265 DFEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT 324
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
TLDEYRKH EKD AL RRFQ ++V EPS I ILKGLR+RYE HHK+ TD A+V+A
Sbjct: 325 TLDEYRKHFEKDAALARRFQSIQVAEPSPALAISILKGLRDRYEAHHKVSITDGAIVAAV 384
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
+S +Y++DRFLPDKAIDLIDEAG+R+RL P E + +E+++ + + K +A+ QD
Sbjct: 385 SMSDRYVTDRFLPDKAIDLIDEAGARLRLSFLSAPPELKAMEEKVAVVRQAKEQAIADQD 444
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
FE A RD E L A+ + + ++ S D VV E I +++ TGIP+
Sbjct: 445 FEAAATKRDEEKKLTAEKVRMEKEFRDGSL------DTPGVVDEALIAEVIAQATGIPLF 498
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K+ DE +L+ ME+ LHKRVIGQ++A+ A+S+ IRR R GLK+P RP SFIF+GPTGV
Sbjct: 499 KLGEDEGAKLIYMEDGLHKRVIGQEQAIAALSKTIRRQRAGLKDPKRPSGSFIFAGPTGV 558
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELAKALA + F E+A+I LDMSE+ E+HTVS+L G+PPG+VGY EGGQLTE +RR+
Sbjct: 559 GKTELAKALAEFLFEDEDALIALDMSEYSEKHTVSRLFGAPPGFVGYEEGGQLTEKIRRK 618
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
P++VVLFDEIEKAHPD+FN +LQILE+GRLTD +GR VDFKNT++IMT+N+G+ I G
Sbjct: 619 PFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTIIIMTTNLGTREIT--G 676
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
+GF L+ D ++ Y ++K V EELK+ F+PEFLNR+D++IVF QL++ E+ +I D+
Sbjct: 677 STLGFSLEGDSQN-DYTQMKGKVNEELKKNFKPEFLNRVDDVIVFPQLSREELLQIVDLF 735
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
+ + RL +D+ L +T ++R++E GY+P+ GARPLRRA+ R +ED+++E++L I
Sbjct: 736 ISRLQLRLDDRDLMLTLTSSAKDRLIELGYDPTMGARPLRRAVQREIEDAISERILTGYI 795
Query: 813 KEGDSVIVD 821
++VD
Sbjct: 796 GTSQDILVD 804
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 58/73 (79%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+FE+FT+KA +V++LAQEEA+ L HNYIG+EH+LLGL+ EGEGVAA+ LE LG + +R
Sbjct: 6 LFEKFTDKARRVVVLAQEEAKLLNHNYIGTEHILLGLIHEGEGVAAKALEALGINLEQVR 65
Query: 151 TQVIRMVGESTEA 163
QV ++G+ ++
Sbjct: 66 EQVQDIIGQGQQS 78
>gi|350272952|ref|YP_004884260.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Oscillibacter
valericigenes Sjm18-20]
gi|348597794|dbj|BAL01755.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Oscillibacter
valericigenes Sjm18-20]
Length = 816
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/735 (54%), Positives = 545/735 (74%), Gaps = 25/735 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A +V+ LA E++ R G++++G+ HLL GLLREG +A R+L G D + T ++
Sbjct: 81 LTPRAKRVVELAVEDSARGGYSFVGTAHLLAGLLREGNNMAVRILRTAGVDAKQLYTALM 140
Query: 155 RMVGESTEAVGAGVGGGSSGNKMP----------TLEEYGTNLTKLAEEGKLDPVVGRQP 204
+ + E+ A G G++ P TL E+ +LT A GKLDPV+GR
Sbjct: 141 QKLNEAPRA------GNREGSRSPGTTRDDSQDKTLREFTRDLTADARSGKLDPVIGRDA 194
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLA++IA GDVPD + K++++LD+ +
Sbjct: 195 EIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLARKIALGDVPDELLDKRILSLDLSGM 254
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAGTKYRGEFEER+KK ++E+KQ ++ILFIDE+HT++GAG+AEGA+DAANI+KP+L RG
Sbjct: 255 VAGTKYRGEFEERIKKALDEVKQDGDVILFIDELHTIVGAGSAEGAVDAANIIKPALGRG 314
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
E++C+GATTL+EYR++IEKD ALERRFQPV+V EPS T++ILKGLR RYE HH+L+ T
Sbjct: 315 EIRCLGATTLNEYRQYIEKDAALERRFQPVQVGEPSQKATLEILKGLRRRYEQHHRLQIT 374
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
D AL +A +LS +YI+DRFLPDKAIDL+DEA SRVR+ + E + L++++ + K+K
Sbjct: 375 DGALSAAVELSARYINDRFLPDKAIDLMDEAASRVRMEEEEPSPELKSLDEKIAALQKDK 434
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
AV Q++EKA +LRD E + + Q+ DK ++ + PV E DI +V+
Sbjct: 435 AAAVAAQNYEKAAQLRDIEKNYQEQVEMERDKRRKHNSTHR------PVTAE-DIAAVVA 487
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
WTGIPV +++ E RLL ME+ LH RV+GQ EAV A+SRAIRR RVGLK+P RPI SF
Sbjct: 488 EWTGIPVTRLTEGEESRLLHMEDQLHVRVVGQSEAVTAVSRAIRRGRVGLKDPKRPIGSF 547
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
+F GPTGVGK+EL KALA FG E AMIR+DMSE+MERHTVS+LIGSPPGYVG+ EGGQ
Sbjct: 548 LFLGPTGVGKTELCKALAESMFGDESAMIRIDMSEYMERHTVSRLIGSPPGYVGHEEGGQ 607
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTE VRR+PY+VVLFDEIEKA+ DV+N++LQILEDGR+TDS+GRTVDFKNT+++MTSNVG
Sbjct: 608 LTEKVRRKPYSVVLFDEIEKANEDVWNILLQILEDGRITDSQGRTVDFKNTVIVMTSNVG 667
Query: 685 SSVIEKGGRRIGFDLDYDEKD--SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
++ I G R+GFD K+ S+Y + K V +EL++ FRPEFLNR+D++IVF +LT+
Sbjct: 668 AASITSAGCRLGFDSGEAVKNETSAYEKGKERVMDELRRTFRPEFLNRIDDIIVFHRLTQ 727
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
++ EIA MLK R+ ++L+ + + +EG++P YGARPLRRAI +ED+
Sbjct: 728 DDITEIARRMLKATEKRMAAMGVKLEADDAAICELAKEGFDPKYGARPLRRAIQNKVEDA 787
Query: 803 MAEKMLAREIKEGDS 817
+AE++L+ +K GD+
Sbjct: 788 VAEQLLSGGLKSGDT 802
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 7/79 (8%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+FT +A + + L QE A LGH Y+G+EHLLLGLLRE +G A VLE G I ++
Sbjct: 5 KFTPRAEEALRLGQEAAGELGHGYVGTEHLLLGLLREPDGTAHSVLETAGLTDGMI-VEI 63
Query: 154 IRMVGESTEAVGAGVGGGS 172
I+ ++VGAG+ GG+
Sbjct: 64 IK------KSVGAGLPGGN 76
>gi|255325858|ref|ZP_05366950.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
gi|255297070|gb|EET76395.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
Length = 922
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/785 (52%), Positives = 568/785 (72%), Gaps = 45/785 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLTKLGADLPRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSS---------------------------GNKMPTLEEYGTNL 187
+++ G N + L+++G NL
Sbjct: 140 QLLSGYEGGQQEGGSSNGQGSGPVGAGAGAGAGAGGRGGSGGSGERSNSL-VLDQFGRNL 198
Query: 188 TKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDV 247
T+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G V
Sbjct: 199 TQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKV 258
Query: 248 PDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA 307
P+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAA
Sbjct: 259 PETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAA 318
Query: 308 EGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI 367
EGAIDAA++LKP LARGELQ IGATTL+EYRKHIEKD ALERRFQPVKV EPS+D+T I
Sbjct: 319 EGAIDAASLLKPKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVKVEEPSLDDTFLI 378
Query: 368 LKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP 427
LKGLR++YE HH++ YTDEAL +AA LS +YI+DRFLPDKA+DL+DEAG+R+R++ P
Sbjct: 379 LKGLRDKYEAHHRVSYTDEALHAAASLSDRYINDRFLPDKAVDLLDEAGARMRIKRMTAP 438
Query: 428 EEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE- 486
+ RE++ + ++ KEK A+ QDFEKA LRD+E L G+E ++ E +
Sbjct: 439 KGLREVDDRIAEVRKEKEAAIDAQDFEKAAGLRDKERKL----------GEERAEKEKQW 488
Query: 487 -AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAI 543
+GD+ + V E I +++ WTGIPV K++ ES+RLL MEE LHKR+IGQDEAVK++
Sbjct: 489 RSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESNRLLNMEEELHKRIIGQDEAVKSV 548
Query: 544 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 603
SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++DM EF +R
Sbjct: 549 SRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQIDMGEFHDR 608
Query: 604 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 663
T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLT
Sbjct: 609 FTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLT 668
Query: 664 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQY 722
D +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y+R+K V +ELK++
Sbjct: 669 DGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGSSENDSDAQYDRMKQKVNDELKKH 727
Query: 723 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGY 782
FRPEFLNR+D+++VF QLT+ ++ E+ ++++ V +L +D+ +++T++ ++ + + G+
Sbjct: 728 FRPEFLNRIDDIVVFHQLTQEQIVEMVELLIGRVAKQLDERDMGIELTQKAKDLLAKRGF 787
Query: 783 NPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESL 841
+P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG G+
Sbjct: 788 DPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVEGWDGESKDNTGAKFTFSPR 847
Query: 842 ADPLP 846
PLP
Sbjct: 848 PKPLP 852
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 REVEEIIGQGSQ 72
>gi|311740167|ref|ZP_07713999.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
gi|311304722|gb|EFQ80793.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
Length = 918
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/785 (52%), Positives = 568/785 (72%), Gaps = 45/785 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A KV+ L+ E ++GH YIG+E LLLGL+REG+GVAA+VL LGAD +R QVI
Sbjct: 80 FTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLTKLGADLPRVRQQVI 139
Query: 155 RMVGESTEAVGAGVGGGSS---------------------------GNKMPTLEEYGTNL 187
+++ G N + L+++G NL
Sbjct: 140 QLLSGYEGGQQEGGSSNGQGSGPVGAGAGAGAGAGGRGGSGGSGERSNSL-VLDQFGRNL 198
Query: 188 TKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDV 247
T+ A++GKLDPVVGR+ ++ER++Q+L RRTKNNP LIGEPGVGKTA+ EGLA I +G V
Sbjct: 199 TQAAKDGKLDPVVGRESEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLALDIVNGKV 258
Query: 248 PDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA 307
P+T++ K++ +LD+G LVAG++YRG+FEERLKK+++EI Q +IILFIDE+HTL+GAGAA
Sbjct: 259 PETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAA 318
Query: 308 EGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI 367
EGAIDAA++LKP LARGELQ IGATTL+EYRKHIEKD ALERRFQPVKV EPS+D+T I
Sbjct: 319 EGAIDAASLLKPKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVKVEEPSLDDTFLI 378
Query: 368 LKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP 427
LKGLR++YE HH++ YTDEAL +AA LS +YI+DRFLPDKA+DL+DEAG+R+R++ P
Sbjct: 379 LKGLRDKYEAHHRVSYTDEALHAAASLSDRYINDRFLPDKAVDLLDEAGARMRIKRMTAP 438
Query: 428 EEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE- 486
+ RE++ + ++ KEK A+ QDFEKA LRD+E L G+E ++ E +
Sbjct: 439 KGLREVDDRIAEVRKEKEAAIDAQDFEKAAGLRDKERKL----------GEERAEKEKQW 488
Query: 487 -AGDVGPV--VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAI 543
+GD+ + V E I +++ WTGIPV K++ ES+RLL MEE LHKR+IGQDEAVK++
Sbjct: 489 RSGDLEEIAEVGEDQIAEVLAHWTGIPVLKLTEKESNRLLNMEEELHKRIIGQDEAVKSV 548
Query: 544 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 603
SRAIRR R GLK+P RP SFIF+GP+GVGK+EL+K+LA + FGS++ +I++DM EF +R
Sbjct: 549 SRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQIDMGEFHDR 608
Query: 604 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 663
T S+L G+PPGYVGY EGGQLTE VRR+P++VVLFDEIEKAH +++N +LQ+LEDGRLT
Sbjct: 609 FTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGRLT 668
Query: 664 DSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFD-LDYDEKDSSYNRIKSLVTEELKQY 722
D +GR VDFKNT+LI TSN+G+ I K +GF ++ D+ Y+R+K V +ELK++
Sbjct: 669 DGQGRVVDFKNTVLIFTSNLGTQDISK-PVGLGFTGSSENDADAQYDRMKQKVNDELKKH 727
Query: 723 FRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGY 782
FRPEFLNR+D+++VF QLT+ ++ E+ ++++ V +L +D+ +++T++ ++ + + G+
Sbjct: 728 FRPEFLNRIDDIVVFHQLTQEQIVEMVELLIGRVAKQLDERDMGIELTQKAKDLLAKRGF 787
Query: 783 NPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS-DGNVTVLNGSSGAPESL 841
+P GARPLRR I R +ED ++EK+L EI G+ + VDV+ DG G+
Sbjct: 788 DPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVEGWDGESKDNTGAKFTFSPR 847
Query: 842 ADPLP 846
PLP
Sbjct: 848 PKPLP 852
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 59/72 (81%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +VI+LAQEEAR L HNYIG+EH+LLGL+ EGEGVAA+ LE++G ++R
Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVR 60
Query: 151 TQVIRMVGESTE 162
+V ++G+ ++
Sbjct: 61 REVEEIIGQGSQ 72
>gi|404372678|ref|ZP_10977973.1| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
gi|404301168|gb|EEH96388.2| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
Length = 812
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/711 (54%), Positives = 532/711 (74%), Gaps = 9/711 (1%)
Query: 109 EARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGV 168
+AR HNYI EH+LL LL + EGVA +L L D I+T + + E
Sbjct: 95 KARIYDHNYINPEHILLALLDDTEGVAYTILSTLKLDLKLIKTDISNYLYEKEVEEIKVE 154
Query: 169 GGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEP 227
K P L +YG NLT +A+EGKLDPVVGR+ + R+++IL RR KNNPCLIGEP
Sbjct: 155 EKAKKKTVKTPLLSQYGRNLTMMAKEGKLDPVVGRENENRRILEILCRRIKNNPCLIGEP 214
Query: 228 GVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ 287
GVGKTA+ EGLAQRI +G+VP+ ++ K +I+LD+ ++AG KYRGEFE+RLKK+M+EI+
Sbjct: 215 GVGKTAVIEGLAQRIINGNVPEILKDKVIISLDLTSMLAGAKYRGEFEDRLKKVMDEIRN 274
Query: 288 SDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPAL 347
S +II+FIDE+HT++GAG AEGAIDA+NILKP+LARGE++CIGATT+DEYRKHIE+D AL
Sbjct: 275 SKDIIIFIDEIHTIVGAGGAEGAIDASNILKPALARGEIKCIGATTIDEYRKHIERDSAL 334
Query: 348 ERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDK 407
ERRFQPV+V EPS +ET+ ILKGLRERYE HH +R DEAL +A +LS +YI+DRF+PDK
Sbjct: 335 ERRFQPVRVEEPSKEETLDILKGLRERYEAHHMVRIEDEALEAAVELSDRYITDRFMPDK 394
Query: 408 AIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK 467
AIDLIDEA ++VR+ + P + L+ +L +KEK EA+R Q+FEKA ELRD+E LK
Sbjct: 395 AIDLIDEASAKVRIENLTSPPDIMNLQLQLENNSKEKEEAIRNQNFEKAAELRDKERQLK 454
Query: 468 AQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 527
++++L ++ E + +V I +VS+W IP+EK++ ES++LL++E+
Sbjct: 455 NKLNSL-----KIDLTNNECNNY--IVNSEQIAKVVSSWAKIPLEKLTEQESEKLLQLED 507
Query: 528 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 587
LHKRVIGQ EAV A+S+A+RRARVGLK+PNRPI +FIF GPTGVGK+EL+ ALA FG
Sbjct: 508 ILHKRVIGQKEAVMAVSKAVRRARVGLKDPNRPIGTFIFCGPTGVGKTELSNALAEAMFG 567
Query: 588 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 647
++ +IR+DMSE+ME+H+V++LIG+PPGY+G+ EGGQLTEAVRR PY+V+L DEIEKAHP
Sbjct: 568 DKKNLIRIDMSEYMEKHSVARLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEIEKAHP 627
Query: 648 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSS 707
DVFN++LQI+EDGRLTDSKG+ ++FKNT++IMTSNVG+ I+K +GF DS
Sbjct: 628 DVFNILLQIMEDGRLTDSKGKIINFKNTIVIMTSNVGAHDIKKQN-TLGFSASNSLVDSE 686
Query: 708 YNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIEL 767
Y ++K + EE+KQ F+PEF+NR+D++IVF +L ++ +I ++ML D+LK + I +
Sbjct: 687 YEKMKKNIMEEIKQQFKPEFINRIDDIIVFHKLEDSDILKIVNLMLNNTIDKLKDRKITI 746
Query: 768 QVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 818
+ E + +V +G + +YGARPLRR I + LED ++E+ML IK GD++
Sbjct: 747 NLNEESKRFLVNKGVDTNYGARPLRRIITKELEDKLSEEMLKGYIKGGDNL 797
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F + TE+A V++ AQ+E++ H YIG+EH+LLGLL+EG G A +VL GA +R
Sbjct: 2 IFGKLTERAQLVLVEAQKESQYFKHGYIGTEHILLGLLKEG-GYAKQVLYINGATIDKVR 60
Query: 151 TQVIRMVG 158
+ +G
Sbjct: 61 KLIEDYLG 68
>gi|257791981|ref|YP_003182587.1| ATPase AAA-2 domain-containing protein [Eggerthella lenta DSM 2243]
gi|317489990|ref|ZP_07948482.1| ATPase [Eggerthella sp. 1_3_56FAA]
gi|325829962|ref|ZP_08163420.1| negative regulator of genetic competence ClpC/MecB [Eggerthella sp.
HGA1]
gi|257475878|gb|ACV56198.1| ATPase AAA-2 domain protein [Eggerthella lenta DSM 2243]
gi|316910988|gb|EFV32605.1| ATPase [Eggerthella sp. 1_3_56FAA]
gi|325488129|gb|EGC90566.1| negative regulator of genetic competence ClpC/MecB [Eggerthella sp.
HGA1]
Length = 854
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/745 (53%), Positives = 555/745 (74%), Gaps = 11/745 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ + EA ++G +YI +EHLLLG++REG+G A VL LG ++R+ +
Sbjct: 82 FTPRVKRVLENSLREAMQMGQSYISTEHLLLGIVREGDGTALEVLTRLGVSGDDVRSALN 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+VG+S G + L+E+GT+LT+ A +GKLDPV+GR +IERV+Q+L
Sbjct: 142 DLVGQSPVYAGRNPFDPNGNTSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLS 201
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RR KNNP LIGEPGVGKTA+AEGLAQ I S VPD + GK++ TLD+ LVAG+KYRGEF
Sbjct: 202 RRQKNNPLLIGEPGVGKTAVAEGLAQLIVSNQVPDILRGKRLFTLDVSALVAGSKYRGEF 261
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK ++E+ + +IILFIDE+HTLIGAG+AEG+IDAA ILKP L+RGE+Q IGATT+
Sbjct: 262 EERLKKCIKEVMDAGDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTI 321
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKH+EKD ALERRFQP+ V EP+ ++ ++I++GLR+RYE HH++ +TDEAL +A L
Sbjct: 322 DEYRKHLEKDSALERRFQPITVGEPNEEQAMRIMEGLRDRYEAHHQVHFTDEALQAAVNL 381
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAID++DEAG+R+R+R+ LP+E REL+ ELR I EK+ A+ QDFE
Sbjct: 382 SNRYIQDRFLPDKAIDVLDEAGARMRIRNMTLPKELRELDDELRTIRGEKDSAIASQDFE 441
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A +LRD+E +LKA+ + + K E +A VT DI +VS TG+PV +
Sbjct: 442 RAAQLRDQESELKAK------RIEAEKKWEEDAQKSVHQVTVEDIADVVSMTTGVPVSNL 495
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LL+ME LH+RV+GQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+GVGK
Sbjct: 496 TEAETEKLLRMEAVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVGK 555
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA + F SE+A++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+RPY
Sbjct: 556 TELSKALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPY 615
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+N ++IMTSNVG+ I +
Sbjct: 616 SVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSNVGAREIAQ-PTT 674
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + + S IKS V E+K+ FRPEFLNR+DE+IVF+ L ++ EI +M+
Sbjct: 675 LGFSTE-EHAGLSDKEIKSRVMAEMKKLFRPEFLNRIDEIIVFKSLNDEQISEIVKLMVA 733
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +R+ +++ + +TE + + +EG + ++GARPLRRAI RLLED ++E++L
Sbjct: 734 DLRERMIEQNMSINLTEAACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEQILEGTWTS 793
Query: 815 GDSVIVDVDS-DGNVTVLNGSSGAP 838
G ++DVD+ DG + GS P
Sbjct: 794 GS--VIDVDAVDGELVFTAGSGSIP 816
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
FE+FT+KA KV++LAQ+EAR L Y+G+EH+LLGL++E +G+AA+ L+ L +
Sbjct: 3 FEKFTDKARKVLVLAQDEARSLHQPYVGTEHILLGLIQEKDGLAAQALDRLNVKYDAV-V 61
Query: 152 QVIRMV 157
Q IR V
Sbjct: 62 QAIRQV 67
>gi|326792086|ref|YP_004309907.1| ATPase AAA [Clostridium lentocellum DSM 5427]
gi|326542850|gb|ADZ84709.1| ATPase AAA-2 domain protein [Clostridium lentocellum DSM 5427]
Length = 822
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/747 (53%), Positives = 571/747 (76%), Gaps = 22/747 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + ++ ++ + A++LG IG+E+LL+ +L+E +A ++LE LG + S + + ++
Sbjct: 80 FTPRVKRIFEMSTQLAKQLGSESIGTEYLLISVLKEKNCIAVKLLETLGINISKLLSVLM 139
Query: 155 RMVGESTEAVGAGVGGGSSG-----NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
M+ ST+ A +G + PTL++Y +LT A EGK DP+VGR+ +I+RV
Sbjct: 140 EMLTGSTQKTEASFSTTKAGEPATKSTTPTLDKYSRDLTTFAREGKFDPIVGREKEIDRV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
+QIL RRTKNNPCL+GEPGVGKTA+ EGLAQ+IAS ++PD ++GK+V++LD+ +++GTK
Sbjct: 200 IQILSRRTKNNPCLVGEPGVGKTAVVEGLAQKIASEEIPDLLKGKRVVSLDLSSMISGTK 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRGEFEER+ K++EE++ + ++ILFIDE+HT+IGAGAAEGA+DA+NILKPSLARGE+Q +
Sbjct: 260 YRGEFEERINKVIEEVRLAGDVILFIDELHTIIGAGAAEGAMDASNILKPSLARGEVQLV 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATTLDEYRKHIEKD ALERRFQPV+V EPS +ET++IL+G++++YE+HH+++ TD+A+
Sbjct: 320 GATTLDEYRKHIEKDAALERRFQPVQVEEPSEEETLEILRGIKDKYEVHHQVQITDDAIK 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+A +LS +YI+DR+LPDKAIDL+DEA S+VRLR P +ELE++L + ++K A+
Sbjct: 380 AAVKLSARYIADRYLPDKAIDLLDEAASKVRLRAFTAPTNIKELEEQLSSLGEQKEIAIM 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV--GPVVTEVDIQHIVSAWT 507
+++EKA E++ +E ++K +I+ +K E +A VV E +I IVS+WT
Sbjct: 440 NEEYEKASEIKRKENEIKEKIAN--------AKVEWDAKHTKNNQVVGEEEIADIVSSWT 491
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
IPV++++ +E++RL +ME+ LH+RV+GQ+EA+ A+S+A+RR RVGLK+PNRPI SF+F
Sbjct: 492 NIPVKRLAEEETERLKQMEKILHERVVGQEEAIVAVSKAVRRGRVGLKDPNRPIGSFMFL 551
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+EL KALA FG E AM+R+DMSE+ME+HTVSK+IGSPPGYVGY EGGQLTE
Sbjct: 552 GPTGVGKTELTKALAEAMFGDENAMVRVDMSEYMEKHTVSKMIGSPPGYVGYEEGGQLTE 611
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS-S 686
VRR+PY VVLFDEIEKAH DVFN++LQIL+DG +TDS+GR ++FKNT++IMTSN+G+ S
Sbjct: 612 KVRRKPYCVVLFDEIEKAHGDVFNILLQILDDGHITDSRGRRINFKNTIIIMTSNIGARS 671
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
+I +++GF + ++ + SY +K V EE+K+ F+PEFLNR+DE +VF L+ E++
Sbjct: 672 II--SPKKVGF-ISTEDAEKSYEDMKKNVMEEVKRTFKPEFLNRIDETLVFHPLSTKEIR 728
Query: 747 EIADIMLKEVFDRL-KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
EIADIM+K + R+ K IE+Q+TE + + ++GYN +YGARPLRR I +ED +++
Sbjct: 729 EIADIMIKRLITRISKNVGIEIQLTEEALDFLGKKGYNQAYGARPLRRTIQTYIEDKLSD 788
Query: 806 KMLAREIKEGDSVIVDVDSDGNVTVLN 832
++L+ KEGD +V V DG V V
Sbjct: 789 EILSGNFKEGD--VVSVTVDGEVCVFT 813
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+FT +A I A++ H Y+G+EHLL+GL+ VA + LE G +I ++
Sbjct: 4 KFTPQAQMAIEYAEQVMTDFRHGYLGTEHLLVGLIHAKNSVAQKALEACGITEEDILDKI 63
Query: 154 IRMVG 158
++G
Sbjct: 64 KDIIG 68
>gi|239618401|ref|YP_002941723.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239507232|gb|ACR80719.1| ATPase AAA-2 domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 828
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/732 (52%), Positives = 553/732 (75%), Gaps = 11/732 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+ T +A +VI LA +E+R LG + I EH++LG++REGEG+AA +L+ +G + +R Q+
Sbjct: 81 QMTPRARRVIELANDESRMLGQDKIDVEHIMLGIVREGEGIAAHILKQMGVNLGKLRKQL 140
Query: 154 I-RMVGESTEAVGAGVGGGSSGNKMPT----LEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
I + + E+ G G+ + M T LE +GT+LT LA GKLDP++GR + +R
Sbjct: 141 IENITSDWDESTTGGRSFGAQQSSMATSLKQLEGFGTDLTALARAGKLDPIIGRDVEKQR 200
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
++++L RR KNNP LIG+PGVGKTAI EGLAQ I + +VP+T++ K + LD+ L+AGT
Sbjct: 201 LMEVLSRRKKNNPVLIGDPGVGKTAIVEGLAQMIVNEEVPETLKNKAIFALDVASLIAGT 260
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFE+RLKKL++ +K + IILFIDE+HT++GAG+AEGA+DAANILKP+LA GE++C
Sbjct: 261 KYRGEFEKRLKKLIQVVKNNGNIILFIDELHTIVGAGSAEGAVDAANILKPALASGEIRC 320
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IG+TT DEYRK++EKD ALERRFQ + V EP+V++TI IL+G++ +YE HHK+ YTD AL
Sbjct: 321 IGSTTPDEYRKYVEKDAALERRFQKIYVSEPTVEQTIGILRGIKHKYEAHHKVYYTDAAL 380
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
+A LS++Y+SDRFLPDKAID+IDEAG+R RLR +P +EL+K++ ++ E+ +AV
Sbjct: 381 EAAVLLSHRYVSDRFLPDKAIDIIDEAGARARLRKLTVPSYLKELQKKIEKLRLEREDAV 440
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
QD+E A EL++ E L + +E +E ++E ++ IVS+WTG
Sbjct: 441 SRQDYEHAAELKEEERVLMKTYKDEYNNWREKVDSEIVQ------ISEEEVAEIVSSWTG 494
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
IP++K+ +S+RLL +EE LHKR++GQDEA+ A+++AIRRAR GLK+P RPI +F+F G
Sbjct: 495 IPLKKLEQSDSERLLSLEEALHKRIVGQDEAITAVAKAIRRARSGLKDPRRPIGTFLFLG 554
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELAKALA Y FG E+A++R DMSE+MER +VS+LIG+PPGYVGY EGG LTE
Sbjct: 555 PTGVGKTELAKALAEYLFGDEKALVRFDMSEYMERFSVSRLIGAPPGYVGYDEGGTLTER 614
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
+R+RP++++LFDEIEKAH D+FN++LQI++DGRLTDS+GR+VDFKNT++IMTSN+G I
Sbjct: 615 IRKRPFSIILFDEIEKAHFDIFNLLLQIMDDGRLTDSQGRSVDFKNTIVIMTSNLGGEFI 674
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
K + +GF + ++ Y +K+ V EE+K+ FRPEFLNRLDE++VF LT+ ++K+I
Sbjct: 675 NKTKKTLGFVSAANVEEKEYESMKNSVLEEVKKTFRPEFLNRLDEIVVFHPLTREQIKKI 734
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
+I++ + RLK K ++L ++E +E +VE+G++P YGARPLRRAI R +ED +AE++L
Sbjct: 735 IEILISDTRKRLKEKKMDLVLSEAAQEFLVEKGFDPVYGARPLRRAIQRYIEDPLAEEVL 794
Query: 809 AREIKEGDSVIV 820
+ GD+++V
Sbjct: 795 RGRFEPGDTIMV 806
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++F+E A +V + AQ+EAR LGH Y+G+EHLLL +L+ G +++L+ +
Sbjct: 3 FDKFSEGAAQVFVAAQDEARSLGHPYVGTEHLLLAILKVNSGTTSQLLKGYSITYERVLR 62
Query: 152 QVIRMVG 158
+V MVG
Sbjct: 63 EVTSMVG 69
>gi|332982904|ref|YP_004464345.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700582|gb|AEE97523.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 855
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/727 (55%), Positives = 550/727 (75%), Gaps = 41/727 (5%)
Query: 110 ARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVG 169
AR +G + HLLLG++REGEG+ AR+L + N+ + E++ +G
Sbjct: 157 AREMGDELVEPVHLLLGIIREGEGLGARLLRD-----HNV----------TVESLMQKIG 201
Query: 170 GGS------SGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 223
G NK PTL E+G +LT+ A+EGKLDPV+GR+ +I+RV++IL RRTKNNP L
Sbjct: 202 GSKPSSKSVKNNKYPTLLEFGRDLTQEAQEGKLDPVIGREDEIKRVIRILCRRTKNNPVL 261
Query: 224 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 283
IG+PGVGKTAI EGLAQRI GDVP+ + K+VI LD+G ++AGTKYRGEFEERLKK+M+
Sbjct: 262 IGDPGVGKTAIVEGLAQRIVMGDVPENLINKRVIALDLGGMIAGTKYRGEFEERLKKVMD 321
Query: 284 EIKQ-SDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIE 342
EIKQ SDE+ILFIDE+HT++GAGAAEGA+DAAN+LKP+LARGEL CIGATT++EYRK+IE
Sbjct: 322 EIKQASDEVILFIDELHTILGAGAAEGAMDAANMLKPALARGELHCIGATTVEEYRKYIE 381
Query: 343 KDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDR 402
KD ALERRFQPV + EP+V++TI+IL+GL+++YE HH++ +D+ALV+AA LS++YI+DR
Sbjct: 382 KDAALERRFQPVLIGEPTVEQTIEILRGLKDKYEAHHRVTISDDALVAAATLSHRYITDR 441
Query: 403 FLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDR 462
+LPDKAIDL+DEA S V + + + LE EL ++ K K AV+ +++EKA + R +
Sbjct: 442 YLPDKAIDLLDEAASAVHVDSLSESDSTKTLEIELERVRKLKEAAVKNEEYEKAAQYRQQ 501
Query: 463 EMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRL 522
E DLK + K + K E P VT D+ IV+AWTGIP ++ +E+ +L
Sbjct: 502 EEDLKRKFEE-AQKQRHSKKDENHT----PTVTADDVAAIVAAWTGIPANQLVEEEAQKL 556
Query: 523 LKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 582
L+ME LHKRV+GQDEAVKA+S A+RRAR GLK+PNRPI SFIF GPTGVGK+ELA+ALA
Sbjct: 557 LRMEGELHKRVVGQDEAVKAVSEAVRRARTGLKDPNRPIGSFIFLGPTGVGKTELARALA 616
Query: 583 AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 642
+ FG E+AMIR+DMSE+ME+HTVS+LIG+PPGYVG+ EGGQLTEAVRR+PY+VVLFDEI
Sbjct: 617 EFLFGDEDAMIRIDMSEYMEKHTVSRLIGAPPGYVGHEEGGQLTEAVRRKPYSVVLFDEI 676
Query: 643 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 702
EKAHPDVFN++LQIL+DGRLTDS G+TVDFKNT++IMTSN+G+ + G Y
Sbjct: 677 EKAHPDVFNILLQILDDGRLTDSHGKTVDFKNTVIIMTSNIGARYFQAG---------YG 727
Query: 703 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKT 762
+++ ++ L+ EEL++ FRPEFLNR+DE+I+F L K ++ I D+ML++V +L+
Sbjct: 728 KEE-----LEKLIHEELQRNFRPEFLNRIDEIIIFHGLEKEHMRAIVDLMLEKVRQQLRG 782
Query: 763 KDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 822
+ +EL+VT++ ++ + +EGY+P +GARPLRR I R LE+ ++ +L + K+GD ++VD+
Sbjct: 783 QGMELEVTDKAKDYIAQEGYDPQFGARPLRRFIRRQLENEISNMILKGDFKDGDKILVDL 842
Query: 823 DSDGNVT 829
D D +
Sbjct: 843 DEDNKLV 849
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FTE A V+ A EEAR+LGHNY+G+EHLLL LL G+ E + D + +R ++
Sbjct: 71 FTEDATAVLQQAYEEARQLGHNYLGTEHLLLALLSPDAGID----EFVDLDKNTVRNEIE 126
Query: 155 RMVGESTEAVGAGV 168
R+ G+ ++ G +
Sbjct: 127 RLAGKGSKDAGKNI 140
>gi|312879531|ref|ZP_07739331.1| ATPase AAA-2 domain protein [Aminomonas paucivorans DSM 12260]
gi|310782822|gb|EFQ23220.1| ATPase AAA-2 domain protein [Aminomonas paucivorans DSM 12260]
Length = 835
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/734 (56%), Positives = 564/734 (76%), Gaps = 15/734 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ +A +V+ L+ EAR +G NY+G+EH+LLGLL EGEGVAA+VL +LG D +R +V
Sbjct: 81 LSPRAKRVLDLSMREARGMGVNYVGTEHILLGLLAEGEGVAAQVLGSLGLDLPKVRQEVQ 140
Query: 155 RMV-GESTEAVGAGVGGGSSGNK------MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+ G S + G + G+K PTL++ G L+ +A++G+LDPV+GR +I+
Sbjct: 141 SFLSGASPDYAEGGREPAAEGDKKNGSSKTPTLDQLGIELSDMAKKGELDPVIGRAKEIQ 200
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
R+VQIL RRTKNNP LIG+PGVGKTAI EGLAQRI +G++P+ ++GK+V+ L++G LVAG
Sbjct: 201 RLVQILSRRTKNNPVLIGDPGVGKTAIVEGLAQRIIAGEIPEVLKGKRVVQLNVGNLVAG 260
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
TKYRGEFEER++KL++E++++ +ILFIDE+HTL+GAG AEGA+DAANILKPSLARGE Q
Sbjct: 261 TKYRGEFEERMRKLVKELREAKGVILFIDEIHTLVGAGGAEGAVDAANILKPSLARGEFQ 320
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEYRK+IEKD ALERRFQP++V EPS ++T++IL GLR+RYE HH+++ D+A
Sbjct: 321 VIGATTLDEYRKYIEKDAALERRFQPIQVEEPSEEDTVKILAGLRDRYEAHHRVKLCDDA 380
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
L +AA+LS +YI++RFLPDKAIDLIDEA +R RL+ + PE+ ++LE+ L I KEK A
Sbjct: 381 LAAAARLSKRYITERFLPDKAIDLIDEAAARARLKTMEAPEDLKDLERSLEGIRKEKESA 440
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
V Q+FEKA +RD E L +I K + + + E P+V DI HIVS WT
Sbjct: 441 VMAQEFEKAARMRDEERRLFEEIEHR-RKSWQNDRNQEE-----PLVGAEDIAHIVSEWT 494
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
GIPV +++ +E+ RLL+MEE +H+R++GQDEA+ A++RA+RRAR GLK+P RP+ SF+F
Sbjct: 495 GIPVLQLTEEEAARLLRMEEEVHRRMVGQDEAIGAVARAVRRARSGLKDPKRPVGSFLFL 554
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELA++LAA+ FGSEEA++R DMSEFMERH V+KLIG+PPGYVGY EGG+LTE
Sbjct: 555 GPTGVGKTELARSLAAFLFGSEEALVRFDMSEFMERHEVAKLIGAPPGYVGYEEGGKLTE 614
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
AVRRRPY VVLFDEIEKAHPDVFN++LQ+LEDGRLTD +G +VDF+NT++IMTSNVG+
Sbjct: 615 AVRRRPYAVVLFDEIEKAHPDVFNILLQLLEDGRLTDGQGHSVDFRNTVVIMTSNVGAQD 674
Query: 688 IEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
+ K G+ +GF LD E+D +++++K + E ++ FRPEFLNR+D+++VFR L + E+
Sbjct: 675 LMK-GQTLGFSLDGSSERDHAWSKMKDTILEAARRTFRPEFLNRVDDIVVFRTLDREELL 733
Query: 747 EIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEK 806
I IM EV R +D+ L++ E ++E+G++P YGARPLRR + RL+ED +A+
Sbjct: 734 AIVKIMAAEVTRRAGEQDLGLELDEASLTLILEKGFDPKYGARPLRRTLQRLVEDRLADL 793
Query: 807 MLAREIKEGDSVIV 820
+L ++ GD V V
Sbjct: 794 LLEGTLRRGDRVRV 807
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M++ FTE+ KV+ LA EA RLGH+ IG+EH+LLGLL EGEGVAA+VL G D +R
Sbjct: 1 MWQFFTERGKKVVQLAHREALRLGHDVIGTEHILLGLLAEGEGVAAQVLGAFGLDLEELR 60
Query: 151 TQVIRMVGE 159
Q+ VG+
Sbjct: 61 GQIESTVGK 69
>gi|336392462|ref|ZP_08573861.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 830
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/743 (54%), Positives = 544/743 (73%), Gaps = 17/743 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ KA +++ A +EA+R+G IG+EH+LLGLLRE + +AAR+L NLG S R ++
Sbjct: 83 YAPKAKQILSYAGDEAKRMGAMKIGTEHILLGLLREDDILAARILTNLGLSLSKTRQMIL 142
Query: 155 RMVGESTEAV-------GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+ +G + A G G +S PTL+ +LT+LA E ++DPVVGR ++
Sbjct: 143 KKLGVTDTAAKRRNAPRGRQAQGNNSSEGTPTLDSLARDLTQLARENQMDPVVGRSKEVR 202
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
R++Q+L RRTKNNP LIGEPGVGKTAIAEGLAQ+I +GDVPD + K+++ LDMG LVAG
Sbjct: 203 RLIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIAGDVPDDMAKKRLMMLDMGSLVAG 262
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
TKYRGEFE+RLKK+++EI + +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGE+Q
Sbjct: 263 TKYRGEFEDRLKKVIDEIYKDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGEMQ 322
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEY+K+IEKD ALERRF ++V EP+ E +IL GLR RYE HH + TDEA
Sbjct: 323 VIGATTLDEYQKYIEKDAALERRFATIQVNEPTQAEAEEILLGLRSRYEEHHGVTITDEA 382
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ A LS +YISDRFLPDKAIDLIDE+ + VRL A +LE EL Q+ K+K A
Sbjct: 383 VHEAVVLSSRYISDRFLPDKAIDLIDESAASVRLDAASKKTPESKLETELNQLVKDKEAA 442
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
+ QDFEKA +R+ EM LK +++ E + A T VT DI +VS WT
Sbjct: 443 IEAQDFEKAASIRENEMALKDKLAT------EQAAAPTNGVRKDVKVTPDDIATVVSQWT 496
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
G+P+ ++ E++RL+ +E+ LHKRVIGQ+EAV A+SRAIRRAR GLK+P RPI SF+F
Sbjct: 497 GVPLTQLQKSETERLINLEKVLHKRVIGQEEAVSAVSRAIRRARSGLKDPQRPIGSFMFL 556
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ELAKALA FGSE+ MIR+DMSE+ME+++ S+L+G+PPGYVGY EGGQLTE
Sbjct: 557 GPTGVGKTELAKALAEAMFGSEDNMIRVDMSEYMEKYSTSRLVGAPPGYVGYEEGGQLTE 616
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
VR++PY+VVL DE+EKAHPDVFN++LQ+L+DG LTDSKGR VDF+NT+LIMTSN+G++
Sbjct: 617 KVRQKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNLGATA 676
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
+ + + +GF ++D Y ++S + EELK+ FRPEF+NR+DE++VF LTK E+ +
Sbjct: 677 L-RDEKSVGFGAQKVQQD--YKAMRSRILEELKKSFRPEFINRIDEVVVFHSLTKPELHQ 733
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKM 807
I IM K V RL ++I++++T + + + G++P YGARP+RRAI + +ED ++E++
Sbjct: 734 IVKIMAKNVLKRLHDQNIDVKITPAAIDVIAKAGFDPEYGARPIRRAIQQQVEDRLSEEL 793
Query: 808 LAREIKEGDSVIVDVDSDGNVTV 830
L+ IK G+SV + G +TV
Sbjct: 794 LSGHIKVGESVTIGA-RKGEITV 815
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A V++LAQE+A+ H+ +G+EHLLL L+ E +G+A + L L +IR ++
Sbjct: 5 FTPSAKNVLVLAQEQAKYFRHHAVGTEHLLLALVIETDGIAGKTLRQLSITDDDIREEIE 64
Query: 155 RMVGESTEA 163
R G T A
Sbjct: 65 RFTGYGTSA 73
>gi|347543096|ref|YP_004857734.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346986133|dbj|BAK81808.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 812
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/764 (52%), Positives = 555/764 (72%), Gaps = 16/764 (2%)
Query: 56 NALDTFTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGH 115
N+ D + D + LS G +K T + KVI + +EA++LGH
Sbjct: 49 NSFDVYYDDIFKEIRTILS--------PGEIEIKNSEIPLTPRTKKVIESSIDEAKKLGH 100
Query: 116 NYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN 175
N++ EH+LL ++ E +GVA ++L+ G I Q I + + + N
Sbjct: 101 NHVSPEHILLSIINETDGVAYKILDKKGVSIVKIWNQTINALNVTIDIQNPHEKEQQLKN 160
Query: 176 -KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 234
P L+++G +LTKLA EGKLDPV+GR + +RV++IL RR KNNPCLIG+PGVGKTAI
Sbjct: 161 LPTPVLDQHGRDLTKLANEGKLDPVIGRDIETQRVLEILCRRIKNNPCLIGDPGVGKTAI 220
Query: 235 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 294
EGLAQ+I G++P+ ++ K+V+TLD+ L+AGTKYRGEFEERLKK+MEEIK+S IILF
Sbjct: 221 IEGLAQKITEGNIPEILKNKRVVTLDLSSLIAGTKYRGEFEERLKKIMEEIKKSKNIILF 280
Query: 295 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 354
IDE+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQP+
Sbjct: 281 IDEIHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDTALERRFQPI 340
Query: 355 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 414
V EP+ DETI IL G+R++YE HHK++ TDEA+ A LS ++I DR+LPDKAIDLIDE
Sbjct: 341 FVGEPNEDETIDILMGIRDKYETHHKVKITDEAIRFAVSLSVRFIPDRYLPDKAIDLIDE 400
Query: 415 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 474
A +++R+R+ +P E +E+E+E+ ++ KEK EA+ +DFEKA LRD+E LK ++
Sbjct: 401 AAAKIRVRNLTVPIEVKEIEEEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERL---- 456
Query: 475 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 534
+ KE K + E D ++TE ++ +V++WT IPVEK++ ES++LLK+EE L RVI
Sbjct: 457 ENSKE--KWKVEKYDKEFILTEQELASVVASWTKIPVEKLTQTESEKLLKLEEMLKNRVI 514
Query: 535 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 594
Q+EAV ++++A++R RVG+K+P RPI SFIF GPTGVGK+EL KAL+ FGSEE +IR
Sbjct: 515 DQNEAVTSVAKAVKRGRVGIKDPKRPIGSFIFLGPTGVGKTELCKALSDIVFGSEENIIR 574
Query: 595 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 654
DMSEFME+HTVSK+IGSPPGY+G+ EGGQLTE VRR PY+++LFDEIEKAHPD+FN+ML
Sbjct: 575 FDMSEFMEKHTVSKIIGSPPGYIGFQEGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIML 634
Query: 655 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 714
QILEDG LTDS G+ V FKNT++I+TSN+G+ +I K +GF + ++ Y ++K+
Sbjct: 635 QILEDGHLTDSNGKRVSFKNTIIILTSNIGADIINKNS-SLGFINHKNNEEEIYTKMKNN 693
Query: 715 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 774
V ELK+ FRPEFLNRLD++IVF+ L K + +I D ML + R+ ++DI + +E +
Sbjct: 694 VLSELKKNFRPEFLNRLDDVIVFKPLDKKSLTKILDKMLLDFNIRVSSQDISINFSEDVK 753
Query: 775 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSV 818
+++ + YGARPLRR+I + +ED++++++L IK GD+V
Sbjct: 754 NYILDNSLSEKYGARPLRRSITKYIEDTLSDQILLGNIKSGDNV 797
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE+ TE+A KVI + ++A +LGH +IG+EH+LLGLLRE +G A ++L +
Sbjct: 1 MFEKLTERARKVISYSGDDALKLGHGFIGTEHILLGLLRE-DGPAQKILNSF 51
>gi|189218258|ref|YP_001938900.1| ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones
[Methylacidiphilum infernorum V4]
gi|189185116|gb|ACD82301.1| ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones
[Methylacidiphilum infernorum V4]
Length = 836
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/742 (54%), Positives = 556/742 (74%), Gaps = 24/742 (3%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T + KV+ LA +EA+ L H+Y+G+EH+LLGLLREGEGVAA +L+NL D +R +++
Sbjct: 81 YTPRVKKVLALAGKEAKALNHSYVGTEHILLGLLREGEGVAATILKNLDIDLERVRNEIL 140
Query: 155 RMVGESTEA-----------VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ 203
+ + + + G K P L+ +G +LT+LA G+LDPV+GR+
Sbjct: 141 KELDPNFSSSGEEESPEPAFAGTTETTTKKEVKTPALKAFGRDLTELARRGELDPVIGRK 200
Query: 204 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 263
+IERV+QIL RRTKNNP LIGE GVGKTAI EGLAQ IA+ +VPD + KK+ITLD+ L
Sbjct: 201 NEIERVMQILCRRTKNNPVLIGEAGVGKTAIVEGLAQEIANENVPDLLRDKKIITLDLAL 260
Query: 264 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 323
+VAGTKYRG+FEER+K +MEEI+++ IILFIDE+HT++GAG+AEGA+DA+NI+KP+L+R
Sbjct: 261 MVAGTKYRGQFEERIKAVMEEIRKAKNIILFIDELHTIVGAGSAEGAMDASNIIKPALSR 320
Query: 324 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 383
GELQCIGATTL EYRK+IEKD ALERRFQ V V PSV+ETIQIL GL+ +YE+HHK ++
Sbjct: 321 GELQCIGATTLSEYRKYIEKDAALERRFQTVLVEAPSVEETIQILHGLKAKYEMHHKAKF 380
Query: 384 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 443
TD+A+ +A +LS +Y++ RFLPDKAID++DEAG+R R+ P E ++LE EL I +
Sbjct: 381 TDQAIDTAVRLSDRYLTGRFLPDKAIDIMDEAGARARIAATMRPPELKDLENELASIRAK 440
Query: 444 KNEAVRGQDFEKAGELRDREMDLKAQI-SALVDKGKEMSKAETEAGDVGPVVTEVDIQHI 502
K+E ++ Q+FEKA LRD+E +LK ++ + D K + ET +TE D+ I
Sbjct: 441 KDECIKAQNFEKAAALRDKERELKEKLEQKIADWKKRRDEKET-------TITEDDMMQI 493
Query: 503 VSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIA 562
VS WTGIP+ +++ ++ + L + L KRVIGQDEA++A+SRA++R+R LK+P RPI
Sbjct: 494 VSKWTGIPITRITENDQSKFLNVGAELRKRVIGQDEAIEALSRALQRSRADLKDPKRPIG 553
Query: 563 SFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEG 622
SFIF GPTGVGK+ LAK LA Y FGS EA+I++DMSE+ME+ VS+LIGSPPGYVGY EG
Sbjct: 554 SFIFLGPTGVGKTMLAKTLAEYVFGSAEALIQIDMSEYMEKFNVSRLIGSPPGYVGYEEG 613
Query: 623 GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSN 682
GQLTE +RRRPY+VVLFDEIEKAHPDV+N++LQILEDG +TDS GR +DF+NT++IMTSN
Sbjct: 614 GQLTEKIRRRPYSVVLFDEIEKAHPDVWNILLQILEDGIVTDSLGRKIDFRNTIIIMTSN 673
Query: 683 VGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTK 742
VG+ + K G +GF DE SY ++K + E +K+ F+PEFLNR+D++IVFR L +
Sbjct: 674 VGAEMGLKPG-VLGFRSKQDE--VSYEQMKERMMETVKRTFKPEFLNRVDDIIVFRSLNR 730
Query: 743 LEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDS 802
++ +I + + +V +RLK+K + +Q+TE + ++E+GY P+YGARPLRRA+ + +E++
Sbjct: 731 EDMVKIVQLEVNKVAERLKSKKLSIQLTEAAIDFLIEKGYEPAYGARPLRRAVEKYVENA 790
Query: 803 MAEKMLAREIKEGDSVIVDVDS 824
+AE++L + E S +V+VD+
Sbjct: 791 IAEELLKGKFAE--STVVEVDA 810
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
FT +A +V+ LA++EA R GHN++G+EHLLLGL++ +GVA VL+ LG D IR ++
Sbjct: 4 FTPRAQQVLALARQEAERFGHNHVGTEHLLLGLIKLAQGVAINVLQKLGVDLEIIRVEI 62
>gi|163791642|ref|ZP_02186039.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
gi|159873091|gb|EDP67198.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
Length = 830
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/729 (54%), Positives = 542/729 (74%), Gaps = 12/729 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
++ +A + I A +EARR+G ++G+EHLLLGLLRE + +++++L NL D + R V+
Sbjct: 83 YSPRAKQAITFATDEARRMGSVFVGTEHLLLGLLREEDILSSKILSNLDIDLNKARQIVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKM---PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+ +G S G G + ++ PTL+ +LT +A E KLDPVVGR +I+R++Q
Sbjct: 143 KKIGLSDITNGKGRKAKPASKQVIGTPTLDSLARDLTSVAREKKLDPVVGRHKEIQRIIQ 202
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP L+GEPGVGKTAIAEGLAQ+I G+VP + K+++ LDMG LVAGTKYR
Sbjct: 203 VLSRRTKNNPVLVGEPGVGKTAIAEGLAQKIIDGEVPTALANKRLMMLDMGSLVAGTKYR 262
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK+++EI Q E+ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQ IGA
Sbjct: 263 GEFEERMKKIIDEIYQDGEVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIGA 322
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEY+K+IEKD ALERRF P+ V PS +ET +IL GLR RYE HH ++ TDEA+ +A
Sbjct: 323 TTLDEYQKYIEKDAALERRFSPIHVDPPSEEETEEILLGLRSRYEEHHGVKITDEAVHAA 382
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+LS +YI+ R LPDKAIDLIDE+ S+VRL + P EL + + K EA++ Q
Sbjct: 383 VKLSSRYITSRQLPDKAIDLIDESASKVRLDVSSKPSPVAAAIAELEDLIQSKEEAIQSQ 442
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
DFEKA +R +EM + +I L + K E +A VTE DI +VS WT IPV
Sbjct: 443 DFEKAARIRIKEMKQRKKIENL------LQKKEGKASSNSLQVTERDIAEVVSLWTSIPV 496
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+++ ESDRL+ +E+ LHKRVIGQ++AV ++SRAIRR+R GLK+PNRPI SF+F GPTG
Sbjct: 497 QQMEQKESDRLMNLEKILHKRVIGQEQAVGSVSRAIRRSRSGLKDPNRPIGSFMFLGPTG 556
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELAKALA FG+EEA++R+DMSEFME+++ S+LIGSPPGYVGY EGGQLTE +R+
Sbjct: 557 VGKTELAKALAEAMFGNEEALVRVDMSEFMEKYSTSRLIGSPPGYVGYDEGGQLTEKIRQ 616
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+V+LFDE+EKAHPDVFN++LQ+L+DG LTDSKGR VDFKNT++IMTSN+G++ + +
Sbjct: 617 KPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDSKGRKVDFKNTVMIMTSNLGATAL-RD 675
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF +KD S ++ + EELK+ F+PEF+NR+D+ IVF L K E+ +I +
Sbjct: 676 EKSVGFGTANSKKDHSA--MEKRIMEELKKTFKPEFINRIDDSIVFHSLEKPELTQIVKL 733
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M + V RLK DI++++T+ + + + GY+P YGARP+RRA+ + +ED ++E++L+
Sbjct: 734 MAQTVVKRLKDMDIDVKITQSAIDVIAKAGYDPEYGARPIRRALQKEIEDRLSEELLSGR 793
Query: 812 IKEGDSVIV 820
+K GD V +
Sbjct: 794 VKIGDQVTI 802
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M E F+EKA V+++AQEEA+ H+ +G+EH+LLGL+ E EG+A + L ++R
Sbjct: 1 MDELFSEKARMVLIMAQEEAKGFRHHSVGTEHILLGLIMEQEGIAGKTLRQFSVTEMDVR 60
Query: 151 TQVIRMVGEST 161
++ G T
Sbjct: 61 EEIEHFTGYGT 71
>gi|297171252|gb|ADI22259.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_36I24]
gi|297171364|gb|ADI22368.1| hypothetical protein [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 827
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/743 (53%), Positives = 548/743 (73%), Gaps = 20/743 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T +A KV+ A EAR H+Y+G+EH+LLGL+RE G+AA+VL++LG + R +V+
Sbjct: 81 YTSRAKKVLEFAMAEAREFNHSYVGTEHMLLGLIREERGIAAQVLDSLGVNLETARAEVV 140
Query: 155 RMVG-ESTEAVGAGVGGGSSG----------NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ 203
+++G E + AG+GGGS +K P L+ + +LT LA++GKLDP +GR
Sbjct: 141 KILGSEFGSSELAGIGGGSPSVPHVSKGEKKSKTPALDHFCRDLTDLAQQGKLDPTIGRT 200
Query: 204 PQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGL 263
+I+RV++IL RR KNNP LIGEPGVGKTAI EGLAQ IA +V + + +++ LD+
Sbjct: 201 DEIDRVIEILCRRKKNNPVLIGEPGVGKTAIVEGLAQLIAKKEVAEPLRNYRLLALDLAA 260
Query: 264 LVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLAR 323
++AGTKYRG+FEERLK ++ EI + IILFIDE+HT++GAGAAEGAIDA+N+LKPSL+R
Sbjct: 261 VIAGTKYRGQFEERLKAVVNEISEHSAIILFIDELHTMVGAGAAEGAIDASNMLKPSLSR 320
Query: 324 GELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRY 383
GELQCIGA+TL+EYRK+IEKD ALERRFQPV V PSVDET ILKGLR YE HH+++
Sbjct: 321 GELQCIGASTLNEYRKYIEKDGALERRFQPVIVEPPSVDETFDILKGLRIYYEEHHRVKI 380
Query: 384 TDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 443
DE L +A+L+ +YI+DRFLPDKAID++DEAG+R + LP + EL++EL +
Sbjct: 381 PDETLKQSAKLADRYITDRFLPDKAIDIMDEAGARASIAAQILPPQVEELKEELTAVGDR 440
Query: 444 KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIV 503
K EA+R QDFE+A ELRD E D++ I D E E + P ++ D+ IV
Sbjct: 441 KEEAIREQDFERAAELRDEERDIQDNIRVAHDDWAE------ERNNHRPEISTEDVAFIV 494
Query: 504 SAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIAS 563
S WTG+PV ++ E+ RL+ MEE +HKRVIGQD+A+ AI+++IRR+R G+++PNRPI S
Sbjct: 495 SRWTGVPVTRLQQAETKRLVNMEEEIHKRVIGQDDAITAIAKSIRRSRAGMRDPNRPIGS 554
Query: 564 FIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGG 623
FIFSGPTGVGK+ELA+ALA + F +A+IR+DMSE+ME+ ++S+LIG+PPGYVGY + G
Sbjct: 555 FIFSGPTGVGKTELARALAEFLFADRDALIRVDMSEYMEKFSISRLIGAPPGYVGYEDSG 614
Query: 624 QLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNV 683
LT+AVRRRPY+VVL DEIEKAHPDVFN++LQ+L++G LTD+ GR +DFKNT+LIMTSN+
Sbjct: 615 TLTKAVRRRPYSVVLLDEIEKAHPDVFNLLLQVLDEGHLTDNYGRVIDFKNTVLIMTSNL 674
Query: 684 GSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKL 743
G I KGG R+GF D D K SSY+ ++ V EE+++ F PEFLNRLD+ IVF L +
Sbjct: 675 GGRDISKGG-RLGFH-DSDPK-SSYDVMQRKVREEIEKAFNPEFLNRLDDTIVFHTLDRK 731
Query: 744 EVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSM 803
++ +I I+L ++ +RL + I ++++ +V+EGY+ +GARPL+RAI + +ED +
Sbjct: 732 DISQIVHILLVDINERLAEEGISIKLSAEAISFLVDEGYDEKFGARPLKRAIQKYVEDPL 791
Query: 804 AEKMLAREIKEGDSVIVDVDSDG 826
+E++L + +GD +IVD+ DG
Sbjct: 792 SERILMADFSDGDEIIVDIGDDG 814
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M FT++ KV+ +A+EEA RL H+Y+G+EH+LLGL+REGEGVAA VL N D + +
Sbjct: 1 MNYNFTDRVRKVLAMAREEAIRLQHDYVGTEHILLGLIREGEGVAAAVLANFDVDLNQVH 60
Query: 151 TQVIRMV--GESTEAVG 165
+V V G +T A+G
Sbjct: 61 DRVEESVKKGNATIALG 77
>gi|325109333|ref|YP_004270401.1| ATPase AAA [Planctomyces brasiliensis DSM 5305]
gi|324969601|gb|ADY60379.1| ATPase AAA-2 domain protein [Planctomyces brasiliensis DSM 5305]
Length = 849
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/758 (53%), Positives = 554/758 (73%), Gaps = 21/758 (2%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KVI A EEAR L HNY+G+EHLLLGLLRE EGVAA+VL NLG ++R +V+
Sbjct: 82 TPRAKKVIEYAMEEARNLNHNYVGTEHLLLGLLREQEGVAAQVLMNLGMKLEDVREEVLN 141
Query: 156 MVG------ESTEAVGAGVGGGSSG--NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
++G ES+E G+G G +G +K P L+ +G +LT+LA +GKLDPV+GR+ +IE
Sbjct: 142 LLGHGLEGAESSERAGSGTGTAKAGKSSKTPALDSFGRDLTELARQGKLDPVIGREREIE 201
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
RV+QIL RR KNNP L+GE GVGKTAI EG AQ G+VPD + K+++ LD+ ++VAG
Sbjct: 202 RVIQILCRRQKNNPVLLGEAGVGKTAIVEGFAQMCVDGNVPDLLTEKRIVVLDLAMMVAG 261
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
TKYRG+FEER+K +M E++++ ILFIDE+HTL+GAG AEGAIDA+N+LKP+L+RGELQ
Sbjct: 262 TKYRGQFEERIKAVMNEVRRAKNTILFIDELHTLVGAGGAEGAIDASNVLKPALSRGELQ 321
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
CIGATTLDEYRK+IEKD ALERRFQ V V PS D+TIQILKGLR+RYE HHK++ TD+A
Sbjct: 322 CIGATTLDEYRKYIEKDGALERRFQMVMVDPPSEDQTIQILKGLRDRYETHHKVQITDDA 381
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
+ A +LS +YI+ R LPDKAID+IDEAG+ VRL+ P + +ELE+E+ ++ ++K EA
Sbjct: 382 IAKAVELSSRYITGRCLPDKAIDVIDEAGAYVRLKTMVRPPDLKELEEEIERLNQQKEEA 441
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWT 507
V QDFEKA LRD+ +K + + + KE SK + D T +V+ T
Sbjct: 442 VANQDFEKAASLRDQADKVKKKKETITQEWKEKSKQKDGLVDAEIAAT------VVAKMT 495
Query: 508 GIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 567
G+P+ ++S++++ RLL+MEE LH+RVI QDEA+K +S+A+RR+R GLK+P RP F+F+
Sbjct: 496 GVPLTRISSEDAVRLLEMEEELHRRVISQDEAIKQVSKAVRRSRSGLKDPKRPTGVFLFA 555
Query: 568 GPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 627
GPTGVGK+ LAK LA + FG EEA+I++DMSE+ E+H +S+LIG+PPGYVGY EGGQLTE
Sbjct: 556 GPTGVGKTLLAKTLAEFMFGDEEALIQIDMSEYQEKHNISRLIGAPPGYVGYEEGGQLTE 615
Query: 628 AVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSV 687
+RRRPY VVL DEIEKAHPDV+NM+LQI+E+G LTDS GR VDFKN +LIMT+N G+ V
Sbjct: 616 QIRRRPYAVVLLDEIEKAHPDVYNMLLQIMEEGHLTDSFGRKVDFKNVILIMTTNAGAEV 675
Query: 688 IEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKE 747
I GF +E ++SY +K V L++ F+PEFL RLDE+++FR+LT+ ++
Sbjct: 676 ISNAS-PFGFFAAKNE-EASYGSMKQEVRSVLQKTFKPEFLGRLDEVVIFRKLTQENLRM 733
Query: 748 IADIMLKEVFDRLKTKDIELQVTERFRERVV---EEGYNPSYGARPLRRAIMRLLEDSMA 804
I DI L +V RL + ++L+++E R+ ++ +EG N YGARPLRR++ +ED +A
Sbjct: 734 IVDIELTKVRTRLAERGLKLELSEEARDFLIDKGQEGENLEYGARPLRRSVEMYVEDPLA 793
Query: 805 EKMLAREIKEGDSVI-VDVDSDGNVTVLNGSSGAPESL 841
E++L R EG ++I VDV G L +S E +
Sbjct: 794 EELL-RNAFEGKNLIHVDVKEVGENKQLEFNSSVSEEV 830
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ERFT++A KV+ LA +EA+R H YIG+EH+LLGL++EG GVAA VL+NL D IR
Sbjct: 1 MYERFTDRARKVMQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIR 60
Query: 151 TQVIRMVGESTEAVGAG 167
+V ++V + V G
Sbjct: 61 LEVEKIVQTGPDMVTMG 77
>gi|402833447|ref|ZP_10882064.1| negative regulator of genetic competence ClpC/MecB [Selenomonas sp.
CM52]
gi|402280486|gb|EJU29193.1| negative regulator of genetic competence ClpC/MecB [Selenomonas sp.
CM52]
Length = 839
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/736 (54%), Positives = 540/736 (73%), Gaps = 18/736 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+T++A +V+ LA EEAR GHNYIG+EH+LLGL+RE EGVAA VL +LGAD +R VI
Sbjct: 80 YTDRAKRVMELAVEEARSFGHNYIGTEHILLGLIRENEGVAAHVLISLGADLDIVRATVI 139
Query: 155 RMVGESTEAV----------GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP 204
M+G + E+ G + P L++YG ++ ++A EGKLDPV+GR+
Sbjct: 140 DMLGGTHESAELPAPDRRRRATTPAQGEAAASTPLLDKYGRDINRMAREGKLDPVIGREK 199
Query: 205 QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLL 264
+IERVVQIL RRTKNNP LIGEPGVGKTA+AEGLA RIA+G VP ++ K++++L M L
Sbjct: 200 EIERVVQILSRRTKNNPILIGEPGVGKTAVAEGLAARIATGAVPRLLQQKRIVSLPMAGL 259
Query: 265 VAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARG 324
VAG KYRGEFEERLK +++E+ +S +ILFIDE+HTLIGAGAAEG++DAANILKP L+RG
Sbjct: 260 VAGAKYRGEFEERLKGIIDEVMKSGNVILFIDEMHTLIGAGAAEGSLDAANILKPPLSRG 319
Query: 325 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYT 384
E+Q IGATTL EY+K+ EKD ALERRFQ + V EP+ +E +IL GLR +YE H +
Sbjct: 320 EVQIIGATTLKEYKKYFEKDSALERRFQSILVEEPTTEEAEKILHGLRPKYEAFHHAKIR 379
Query: 385 DEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 444
DEAL +A +LS++YI DR LPDKAIDL+DEA S+ R++ LP + LE+ L+++ EK
Sbjct: 380 DEALKAAVRLSHRYIPDRCLPDKAIDLMDEAASKSRMKTVVLPTSIKRLEERLKKLGVEK 439
Query: 445 NEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVS 504
+ A++ QD+E+A LRD E LK ++A ++ +E E VT DI V
Sbjct: 440 DTAIKLQDYERAAALRDEESALKEDLAAAKERWQEREMKEV-------TVTADDIADAVG 492
Query: 505 AWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASF 564
WTGIPV+ ++ ES+RLL +E+ L V+GQ+EAV A+++A+RRAR GLK+P RPI SF
Sbjct: 493 LWTGIPVKDIAAKESERLLHLEQILTAHVVGQEEAVTAVAKAVRRARAGLKDPKRPIGSF 552
Query: 565 IFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQ 624
+F G TGVGK+ELA+ALA FG++EA++R DMSE+ME+HTVSKL+G+PPGYVGY EGGQ
Sbjct: 553 LFLGSTGVGKTELARALAESLFGTDEAIVRFDMSEYMEKHTVSKLVGAPPGYVGYEEGGQ 612
Query: 625 LTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVG 684
LTEAVRR PY+++L DE+EKAHPD+FN++LQ+L+DGRLTD++GRTVD KNT++IMTSN G
Sbjct: 613 LTEAVRRHPYSIILLDEVEKAHPDLFNVLLQVLDDGRLTDAQGRTVDCKNTVIIMTSNAG 672
Query: 685 SSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
+ + K +GF +Y + KS V EE+K+ FRPEFLNR+DEM+VFR L K E
Sbjct: 673 ADYL-KQSTSLGFTAGVQTLGDAYEKGKSRVFEEVKRVFRPEFLNRVDEMLVFRPLGKEE 731
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ +I DIML+EV RL K + L+V+ + ++VE G + YGARPL+RAI +L+ED +A
Sbjct: 732 LTKIVDIMLREVEARLSEKGMALEVSPAAKSKLVENGTDFKYGARPLKRAIRKLVEDEIA 791
Query: 805 EKMLAREIKEGDSVIV 820
E++L + GD++ V
Sbjct: 792 ERLLKGDFGRGDTIYV 807
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M RFT +A+KV+ AQ EA+ L N+IG+EH+LLGLL EGEG+AAR L +LG D ++R
Sbjct: 1 MTNRFTGRALKVLEFAQYEAQELEQNFIGTEHILLGLLHEGEGIAARALRSLGLDFGHVR 60
Query: 151 TQVIRMVG 158
T+V M+G
Sbjct: 61 TRVEDMLG 68
>gi|300088291|ref|YP_003758813.1| ATPase AAA-2 domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528024|gb|ADJ26492.1| ATPase AAA-2 domain protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 843
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/752 (54%), Positives = 557/752 (74%), Gaps = 12/752 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI LA +EAR L HNYIG+EHLLLGLLREGEGVAA VL++ G R ++
Sbjct: 83 LTSRAKKVIELAIDEARTLNHNYIGTEHLLLGLLREGEGVAAGVLDSFGITIDKTRAEIT 142
Query: 155 RMVGESTEAVGAGV-GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
R++ + GA + GG S +K P L+ +LT A GKLDPVVGRQ +I+RV+QIL
Sbjct: 143 RVLSQGAINRGAPLKAGGRSQSKTPNLDAVSLDLTAAARAGKLDPVVGRQKEIDRVIQIL 202
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIGEPGVGKTAI EGLA RI + DVP+T+E K++++LD+ LVAGTKYRGE
Sbjct: 203 SRRTKNNPALIGEPGVGKTAIVEGLAHRIVAADVPETLENKRLVSLDIASLVAGTKYRGE 262
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEERLKK++EE++ S I++FIDE HT++GAGAAEGA+DAANI+KPSLARGE+Q IGATT
Sbjct: 263 FEERLKKILEELRASGNIVVFIDEFHTMVGAGAAEGAVDAANIMKPSLARGEIQIIGATT 322
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
LD+YRKH+E+D ALERRFQPV V EPS+++TI+IL+G+R RYE HH+L TD+AL +AA
Sbjct: 323 LDDYRKHVERDAALERRFQPVLVEEPSLEDTIEILRGIRSRYEEHHRLEITDDALEAAAS 382
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
++ +YISDRF+PDKAID+IDEA SRVR+RH P ++L+K ++K A+ Q +
Sbjct: 383 MASRYISDRFMPDKAIDIIDEASSRVRIRHRTKPMPLKDLKKAEDSYRRDKEAALATQQY 442
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVG-PVVTEVDIQHIVSAWTGIPVE 512
+ A ELR+RE + +K ++M + E P V++ DI +VS WTG+P+
Sbjct: 443 DFAAELREREYQ-------IAEKRRKMEEEWQEEQGQALPKVSKEDIADVVSMWTGVPLL 495
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
+++ DE++RLL MEE LH+R+IGQ+EA+ I++A+RRAR GLK+P+RPI +FIF GPTGV
Sbjct: 496 QLTGDETERLLHMEEVLHERIIGQEEAINTIAKAVRRARAGLKDPSRPIGNFIFLGPTGV 555
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELA+ALA + FGSE++M+R+DMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+
Sbjct: 556 GKTELARALAQFMFGSEDSMVRIDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRK 615
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
Y ++L DEIEKAH DVFN++LQI +DG LTD+KGR VDF+N+++IMTSN+G+ +I KG
Sbjct: 616 GYCLILLDEIEKAHADVFNILLQIFDDGHLTDAKGRRVDFRNSIVIMTSNIGADLIRKGS 675
Query: 693 RRIGFDLDYDEKDS---SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
IGF DE + +Y ++K + E+K+ FRPEFLNR+D +VF LT+ +++EI
Sbjct: 676 GTIGFSTVGDENKAVEVNYEKMKDKLLGEVKKSFRPEFLNRVDSTVVFHSLTRDQIREIV 735
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
D+ L + +LK K+I ++VTE ++ + +GY+ YGARPLRR I LLED ++E +L
Sbjct: 736 DLQLVSITTQLKEKNIGIEVTESAKDVLGRKGYDEVYGARPLRRVIQNLLEDRLSEDLLR 795
Query: 810 REIKEGDSVIVDVDSDGNVTVLNGSSGAPESL 841
+ GD+V+VD +G P+ L
Sbjct: 796 GDYGPGDTVVVDASGEGEELTFTIRHAPPQEL 827
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++F+E+A +V+ AQEEA+ L HNYIG+EH+LLG++RE +GVAARVL ++ + + +R+
Sbjct: 5 FDKFSERARRVLTYAQEEAQNLNHNYIGTEHILLGMVREEDGVAARVLASMDVNLAKLRS 64
Query: 152 QVIRMVGESTEAVGAGVGGGSSGNKMPTL 180
V ++G + G S K+ L
Sbjct: 65 AVEFVIGRGEKPSSGETGLTSRAKKVIEL 93
>gi|229547309|ref|ZP_04436034.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
gi|229307548|gb|EEN73535.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
Length = 831
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/764 (53%), Positives = 562/764 (73%), Gaps = 19/764 (2%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
++ ++ +A ++ A +EA+RLG IG+EHLLLGLLR+ E +A+R+L NLG S +R
Sbjct: 81 LYLPYSPRAKQIFAYAGDEAKRLGAQKIGTEHLLLGLLRDEEILASRILVNLGLSLSKMR 140
Query: 151 TQVIRMVGESTEAVGAGVGGGSSGNK---MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIE 207
+++ +G S G S N PTL+ +LTKLA E LDPVVGR ++
Sbjct: 141 QLLLKKMGVSEPNGAQRRRNGQSKNAPQGTPTLDSLARDLTKLAREQSLDPVVGRGTEVR 200
Query: 208 RVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAG 267
R++QIL RRTKNNP L+GEPGVGKTAIAEGLAQ+I + +VP+ ++GK+++ LDMG LVAG
Sbjct: 201 RLIQILSRRTKNNPVLVGEPGVGKTAIAEGLAQKIVNREVPEDMQGKRLMMLDMGALVAG 260
Query: 268 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQ 327
TKYRGEFE+RLKK+++EI Q ++ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQ
Sbjct: 261 TKYRGEFEDRLKKVVDEIYQDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQ 320
Query: 328 CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEA 387
IGATTLDEY+K+IEKD ALERRF ++V EP+ +E +ILKGLR RYE HH + TDEA
Sbjct: 321 TIGATTLDEYQKYIEKDAALERRFARIQVAEPTPEEVEEILKGLRSRYEKHHGVEITDEA 380
Query: 388 LVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEA 447
L +A QLS +Y++DR LPDKAIDL+DE+ ++VRL A P E EL E+ Q+ EK EA
Sbjct: 381 LHAAVQLSIRYLNDRQLPDKAIDLMDESAAKVRLDKADQPSEINELRTEISQLITEKEEA 440
Query: 448 VRGQDFEKAGELRDREMDLKAQISALVD-KGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
++ Q FE A +R +E + ++ L+ K K +S T+ VTE D+ +VS W
Sbjct: 441 IQNQSFESAARIRQKEKQVMEKLEELIAVKEKSLSGYSTQ-------VTEEDVAGVVSQW 493
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
TG+P++++ ES+RL+++E LH+RV+GQ+EAV+A+SRAIRRAR GLK+P RPI SF+F
Sbjct: 494 TGVPLQQLEKKESERLMELETILHQRVVGQNEAVEAVSRAIRRARSGLKDPARPIGSFMF 553
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTGVGK+ELAKALA FGSEEA+IR+DMSEFME+++ S+LIGSPPGYVGY EGGQLT
Sbjct: 554 LGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQLT 613
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E +R+RPY+V+L DE+EKAHPDVFN++LQ+L+DG LTD+KGR VDF+NT+LIMTSN+G++
Sbjct: 614 EKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNLGAT 673
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLE 744
I + + +GF++ KD S N ++ + EELK+ FRPEFLNR+DE +VF L + E
Sbjct: 674 AI-REEKHVGFNV----KDISKNHELMQKRIMEELKKAFRPEFLNRIDETVVFHSLKQEE 728
Query: 745 VKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMA 804
+ EI IM + V R+ +++++++T E + + G++P YGARP+RRA+ + +ED ++
Sbjct: 729 IHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGARPIRRALQKEVEDRLS 788
Query: 805 EKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPESLADPLPVV 848
E +L+ +I+ GD V + S G +T+ + AP++ A L V
Sbjct: 789 EALLSGQIQLGDKVTLGA-SKGKITLNVRAPKAPKTEAKELQTV 831
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M E FTE A V+ +AQEEA+ H +GSEHLLL L+ E G+A + L L D +IR
Sbjct: 1 MDELFTESAKAVLAIAQEEAKYFRHQSVGSEHLLLALVLEPNGIAGKTLRQLNTDTEDIR 60
Query: 151 TQVIRMVGEST 161
++ + G T
Sbjct: 61 EEIEHLSGYGT 71
>gi|260437887|ref|ZP_05791703.1| negative regulator of genetic competence ClpC/MecB [Butyrivibrio
crossotus DSM 2876]
gi|292809637|gb|EFF68842.1| negative regulator of genetic competence ClpC/MecB [Butyrivibrio
crossotus DSM 2876]
Length = 815
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/743 (53%), Positives = 544/743 (73%), Gaps = 11/743 (1%)
Query: 93 ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 152
+ +T +A +++ A++EA+R IG+EH+ +G+L+E + VA R+L +G
Sbjct: 79 DSYTPRAARILENARKEAKRFKSGLIGTEHIFIGMLKEQDCVATRLLGTIGVKIQKAYID 138
Query: 153 VIRMVGESTEAVGAGVGGGSSGNK--MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVV 210
+ +GE + V K PTL++Y +LT LAEEGKLDPV+GR+ +I+RV+
Sbjct: 139 TVVAMGEDSNNYKDEVSFNRKNKKSQTPTLDQYSRDLTALAEEGKLDPVIGREREIQRVI 198
Query: 211 QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKY 270
QI RRTKNNPCL+GEPGVGKTA+ EG+A +IA G+VPDTI GK+++TLD+ +VAG+KY
Sbjct: 199 QIGSRRTKNNPCLVGEPGVGKTAVVEGIAIKIAEGNVPDTIRGKRLLTLDLSGMVAGSKY 258
Query: 271 RGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIG 330
RGEFEER+KK+++E++ + +ILFIDE+HT+IGAG AEGAIDA+NILKPSLARGE+Q IG
Sbjct: 259 RGEFEERIKKVIKEVRAAGNVILFIDELHTIIGAGGAEGAIDASNILKPSLARGEVQIIG 318
Query: 331 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVS 390
ATT+DEYRK+IEKD ALERRFQPV V EPS DE +ILKGL+E YE HH + TD AL S
Sbjct: 319 ATTIDEYRKYIEKDAALERRFQPVNVDEPSEDEAYEILKGLKETYETHHGVTITDGALHS 378
Query: 391 AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRG 450
A +LS +YI+DRFLPDKAIDLIDEA S+VRL PEE + E E+ ++ +K EA++
Sbjct: 379 AVKLSKRYINDRFLPDKAIDLIDEASSKVRLGAFIKPEEISKTEAEIEKLEADKEEAIKA 438
Query: 451 QDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIP 510
+ +EKAGE++ +++ ++ L +K + E + VV E I +VS WT IP
Sbjct: 439 EAYEKAGEIKKKQLKKYEKLEKL------NTKWQNEKNNRNLVVDEESIALVVSDWTKIP 492
Query: 511 VEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPT 570
V K+S ES+RL+K+EETLH+RV+GQDEAV +I+RAIRR RVGLK+P RPI SF+F GPT
Sbjct: 493 VNKLSIGESERLMKLEETLHERVVGQDEAVTSIARAIRRGRVGLKDPKRPIGSFLFLGPT 552
Query: 571 GVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVR 630
GVGK+EL+K LA FG+E ++IR+DMSE+ME+H+VSK+IGSPPGYVGY EGGQL+E VR
Sbjct: 553 GVGKTELSKTLADAMFGNENSLIRVDMSEYMEKHSVSKMIGSPPGYVGYEEGGQLSEKVR 612
Query: 631 RRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEK 690
R PY+V+LFDEIEKAHPDVFN++LQIL+DG +TDS GR VDFKNT++IMTSN G+ I
Sbjct: 613 RNPYSVILFDEIEKAHPDVFNVLLQILDDGVVTDSSGRKVDFKNTIIIMTSNAGAENI-V 671
Query: 691 GGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+ +GF+ D + Y +K+ V +E+K+ F+PEFLNR+DEMIVF LTK V I D
Sbjct: 672 SPKNLGFNTSKD-PEQDYKNMKNKVMDEVKRIFKPEFLNRIDEMIVFHMLTKENVARIVD 730
Query: 751 IMLKEVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
IM+ + R+K + +I +++++ + +V+ GY+ YGARPL+RA+ + +ED +AE++L
Sbjct: 731 IMMNSINKRIKEQLNITIELSDAAKSYIVDAGYDEKYGARPLKRALQQKVEDELAEQILE 790
Query: 810 REIKEGDSVIVDVDSDGNVTVLN 832
IK D V VD D V +
Sbjct: 791 GRIKSSDVVYVDKKEDSEKLVFS 813
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNI 149
FT+KA + A E A LGH +GSEH+L+GLLR E +A VL N G + S +
Sbjct: 5 FTKKAETALQNATEAAFELGHGSVGSEHILIGLLRTEECIANAVLVNNGVEESKV 59
>gi|222099462|ref|YP_002534030.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga neapolitana
DSM 4359]
gi|221571852|gb|ACM22664.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga neapolitana
DSM 4359]
Length = 820
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/734 (54%), Positives = 556/734 (75%), Gaps = 8/734 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
+ T +A +V LA EEA+ LG + I EH+LLG+LREGEG+A +L LG D + +R ++
Sbjct: 79 QMTPRAKRVTELAYEEAKILGSDKINPEHILLGILREGEGIAIHILRKLGVDLNALRREI 138
Query: 154 IRMVG-ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQI 212
I + S + + + + LE +G NLT+LA + +LDPV+GR+ +IERV+Q+
Sbjct: 139 IDLYSYSSNKGLEYEEEEDYTYRSVKQLEGFGVNLTELAAKKELDPVIGREEEIERVMQV 198
Query: 213 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRG 272
L RR KNNP LIG+PGVGKTAI EGLAQRI +GDVP+ + K + +LD+ LVAGTKYRG
Sbjct: 199 LVRRKKNNPVLIGDPGVGKTAIVEGLAQRIVAGDVPEILRNKVIFSLDVAALVAGTKYRG 258
Query: 273 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGAT 332
EFE+R+KKL++ + + IILFIDE+HT++GAG+AEGAIDAANILKP+LARGE+ CIGAT
Sbjct: 259 EFEKRMKKLLQIVTKDKNIILFIDEIHTIVGAGSAEGAIDAANILKPALARGEISCIGAT 318
Query: 333 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAA 392
T DEYRK+IEKD ALERRFQ + V EP+ +ET++ILKGL+++YE HH++ YTD+AL +A
Sbjct: 319 TPDEYRKYIEKDAALERRFQKIYVKEPTEEETLEILKGLKKKYESHHRVIYTDKALEAAV 378
Query: 393 QLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD 452
LS +YI+D FLPDKAID+IDEAG+R RL+ +P E + ++ EL +I +K AV QD
Sbjct: 379 YLSKRYITDHFLPDKAIDVIDEAGARARLKVFIIPPELKSIKNELEKIRTDKELAVLNQD 438
Query: 453 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVE 512
+EKA +L+++EM+L+ + + + ++ DV DI +VS+WTG+P++
Sbjct: 439 YEKAAKLKEKEMELETEYRRKYAEWRRKAETAVVKVDVD------DIAEVVSSWTGVPLK 492
Query: 513 KVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGV 572
K+ E ++LL +EE LH+R++ QDEA+KA++RAIRRAR GLK+P RPI F+F GPTGV
Sbjct: 493 KIEETEVEKLLNLEEALHQRIVAQDEAIKAVARAIRRARSGLKDPRRPIGVFLFLGPTGV 552
Query: 573 GKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRR 632
GK+ELAKALA Y FG E A+IR DMSE+MER +VS+LIG+PPGYVGY EGG LTE VRRR
Sbjct: 553 GKTELAKALAEYLFGDERALIRFDMSEYMERFSVSRLIGAPPGYVGYEEGGTLTEKVRRR 612
Query: 633 PYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGG 692
P++V+LFDEIEKAHPDVFN++LQI++DGRLTDS+GR VDF+NT++IMTSN+GSS I K
Sbjct: 613 PFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDSQGREVDFRNTIIIMTSNIGSSYINKSK 672
Query: 693 RRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIM 752
R +GF D D+++ +++IK LV +E+K+ FRPEFLNR+DE I+F L K +++I DI+
Sbjct: 673 RTLGFVGD-DDEEKEFDKIKELVLDEVKRTFRPEFLNRIDETIIFHPLRKEHIEQIIDIL 731
Query: 753 LKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREI 812
L+++ RL K+++L +T+ +E +VE+G++P YGARPL+RAI R +ED ++E++L +
Sbjct: 732 LRDLRKRLAEKNMKLVLTKSAKEFLVEKGFDPVYGARPLKRAIQRYVEDPLSEEILKSKF 791
Query: 813 KEGDSVIVDVDSDG 826
+EGD+++ DG
Sbjct: 792 EEGDTIVCRAHKDG 805
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MF++F+EK ++ + AQEEA+ LGH+Y+G+EHLLL +L+ +G A VLE +GA S +R
Sbjct: 1 MFDKFSEKTAQIFVTAQEEAKELGHSYVGTEHLLLAILKVDKGPAVEVLEEMGASYSKVR 60
Query: 151 TQVIRMVG 158
+++I MVG
Sbjct: 61 SEIISMVG 68
>gi|333396625|ref|ZP_08478442.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 829
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/742 (54%), Positives = 545/742 (73%), Gaps = 16/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
+ KA +++ A +EA+R+G IG+EH+LLGLLRE + +AAR+L NLG S R ++
Sbjct: 83 YAPKAKQILSYAGDEAKRMGAMKIGTEHILLGLLREDDILAARILTNLGLSLSKTRQIIL 142
Query: 155 RMVGESTEAV---GAGVGGGSSGNK---MPTLEEYGTNLTKLAEEGKLDPVVGRQPQIER 208
+ +G + A A G + GN PTL+ +LT+LA E ++DPVVGR ++ R
Sbjct: 143 KKLGVTDTAAKRRNAPRGRQAQGNSSEGTPTLDSLARDLTQLARENQMDPVVGRSKEVRR 202
Query: 209 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGT 268
++Q+L RRTKNNP LIGEPGVGKTAIAEGLAQ+I +GDVPD + K+++ LDMG LVAGT
Sbjct: 203 LIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIAGDVPDDMAKKRLMMLDMGSLVAGT 262
Query: 269 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQC 328
KYRGEFE+RLKK+++EI + +ILFIDE+HTLIGAG AEGAIDA+NILKP+LARGE+Q
Sbjct: 263 KYRGEFEDRLKKVIDEIYKDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGEMQV 322
Query: 329 IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 388
IGATTLDEY+K+IEKD ALERRF ++V EP+ E +IL GLR RYE HH + TDEA+
Sbjct: 323 IGATTLDEYQKYIEKDAALERRFATIQVNEPTQAEAEEILLGLRSRYEEHHGVTITDEAV 382
Query: 389 VSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 448
A LS +YISDRFLPDKAIDLIDE+ + VRL A +LE EL Q+ K+K A+
Sbjct: 383 HEAVVLSSRYISDRFLPDKAIDLIDESAASVRLDAASKKTPESKLETELNQLVKDKEAAI 442
Query: 449 RGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTG 508
QDFEKA +R+ EM LK +++ E + A T VT DI +VS WTG
Sbjct: 443 EAQDFEKAASIRENEMALKDKLAT------EQAAAPTNGVRKDVKVTPDDIATVVSQWTG 496
Query: 509 IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 568
+P+ ++ E++RL+ +E+ LHKRVIGQ+EAV A+SRAIRRAR GLK+P RPI SF+F G
Sbjct: 497 VPLTQLQKSETERLINLEKVLHKRVIGQEEAVSAVSRAIRRARSGLKDPQRPIGSFMFLG 556
Query: 569 PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 628
PTGVGK+ELAKALA FGSE+ MIR+DMSE+ME+++ S+L+G+PPGYVGY EGGQLTE
Sbjct: 557 PTGVGKTELAKALAEAMFGSEDNMIRVDMSEYMEKYSTSRLVGAPPGYVGYEEGGQLTEK 616
Query: 629 VRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVI 688
VR++PY+VVL DE+EKAHPDVFN++LQ+L+DG LTDSKGR VDF+NT+LIMTSN+G++ +
Sbjct: 617 VRQKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNLGATAL 676
Query: 689 EKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEI 748
+ + +GF ++D Y ++S + EELK+ FRPEF+NR+DE++VF LTK E+ +I
Sbjct: 677 -RDEKSVGFGAQKVQQD--YKAMRSRILEELKKSFRPEFINRIDEVVVFHSLTKPELHQI 733
Query: 749 ADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKML 808
IM K V RL ++I++++T + + + G++P YGARP+RRAI + +ED ++E++L
Sbjct: 734 VKIMAKNVLKRLHDQNIDVKITPAAIDVIAKAGFDPEYGARPIRRAIQQQVEDRLSEELL 793
Query: 809 AREIKEGDSVIVDVDSDGNVTV 830
+ IK G+SV + G +TV
Sbjct: 794 SGHIKVGESVTIGA-RKGEITV 814
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT A V++LAQE+A+ H+ +G+EHLLL L+ E +G+A + L L +IR ++
Sbjct: 5 FTPSAKNVLVLAQEQAKYFRHHAVGTEHLLLALVIETDGIAGKTLRQLSITDDDIREEIE 64
Query: 155 RMVGESTEA 163
R G A
Sbjct: 65 RFTGYGASA 73
>gi|225018460|ref|ZP_03707652.1| hypothetical protein CLOSTMETH_02407 [Clostridium methylpentosum
DSM 5476]
gi|224948769|gb|EEG29978.1| hypothetical protein CLOSTMETH_02407 [Clostridium methylpentosum
DSM 5476]
Length = 813
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/741 (54%), Positives = 543/741 (73%), Gaps = 20/741 (2%)
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
G + + FT + ++ + EAR +GH+Y+G+EH+LL L E + L+ +GA
Sbjct: 72 GMPCRMTPDNFTPRTKHILEQSMIEARNIGHSYVGTEHVLLAFLTEEDSYGMLFLQEMGA 131
Query: 145 DPSNIRTQVIRMVGES-TEAVGAGVGGG----SSGNKMPTLEEYGTNLTKLAEEGKLDPV 199
P + ++ + +G S TE + GGG G P L++YG +LT+LA G++DPV
Sbjct: 132 SPKELYSECVEEIGSSLTEGMQDPYGGGREKRKKGENGP-LDKYGHDLTQLARLGEIDPV 190
Query: 200 VGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITL 259
+GRQ +IERV+QIL RRTKNNPCLIGEPGVGKTAIAEGLAQ+I SG+VP+ ++ K++++L
Sbjct: 191 IGRQKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEGLAQKIVSGEVPEILKDKRIVSL 250
Query: 260 DMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKP 319
D+ ++AG KYRG+FEER+K ++E+ +S ++ILFIDE+HT++GAGAAEGA+DAA+ILKP
Sbjct: 251 DLTSMLAGAKYRGDFEERIKGTLDEVAKSKQVILFIDELHTIVGAGAAEGAVDAASILKP 310
Query: 320 SLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 379
LARGE+Q IGATT+DEY KHIEKD ALERRFQPV + EP+ + QIL GLR++YE HH
Sbjct: 311 QLARGEIQMIGATTVDEYHKHIEKDAALERRFQPVLIEEPTPQDAEQILLGLRDKYEAHH 370
Query: 380 KLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ 439
K+R TDEA+ +A QLS +YI+DRFLPDKAIDL+DEA SRVRL+ P RELE ++++
Sbjct: 371 KIRITDEAIRTAIQLSTRYITDRFLPDKAIDLVDEAASRVRLKAFTAPNGVRELEDKIKK 430
Query: 440 ITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDI 499
+ E A+ QDFE A LRDRE L+ Q+ A +K + K G V P +I
Sbjct: 431 LKDELCSAINAQDFESAALLRDREKSLREQLEA--EKSRWQEKTARNTGQVTP----DEI 484
Query: 500 QHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNR 559
IV++WTGIPV++++ ES+RLL +E LHKRVIGQDEAV AIS+AIRR RVGLK+P R
Sbjct: 485 AEIVASWTGIPVKQLTQTESERLLNLESILHKRVIGQDEAVTAISKAIRRGRVGLKDPKR 544
Query: 560 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGY 619
PI SF+F GPTGVGK+EL K LA FG E +MIRLDMSE+ME+H+VS+++GSPPGYVGY
Sbjct: 545 PIGSFLFLGPTGVGKTELCKTLAEALFGDESSMIRLDMSEYMEKHSVSRMVGSPPGYVGY 604
Query: 620 TEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIM 679
EGGQLTE +RR+PY VVLFDEIEKAHPDVFNM+LQILEDG LTD++GR VDF+NT+LIM
Sbjct: 605 EEGGQLTEKIRRKPYAVVLFDEIEKAHPDVFNMLLQILEDGILTDAQGRRVDFRNTVLIM 664
Query: 680 TSNVGSSVIEKGGRRIGF--DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
TSN+G+ +I + + +GF +D E+D +K+ V EL++ FRPEFLNR+D++IVF
Sbjct: 665 TSNIGARLITE-RKNLGFVGAVDDAERD-----VKADVIAELRRSFRPEFLNRVDDIIVF 718
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
+L +++IA ML DR++ +++ + + + + G++P YGARPLRRAI
Sbjct: 719 HKLNSENIEQIAFHMLAAFADRVQKLGVDITYDRQPVKEIAKIGFDPLYGARPLRRAITS 778
Query: 798 LLEDSMAEKMLAREIKEGDSV 818
+ED ++E+ML ++K GD +
Sbjct: 779 NIEDLLSERMLEGKVKAGDQI 799
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
+F FTEKA + + A A LGH +G+EHLL GL E GVAA +L G +
Sbjct: 3 VFNGFTEKANEALNTAITIAGELGHTCVGTEHLLYGLASETGGVAAALLGQKGITAELVE 62
Query: 151 TQVIRMVG 158
++I VG
Sbjct: 63 HKLIEAVG 70
>gi|342215074|ref|ZP_08707743.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 780 str. F0422]
gi|341590180|gb|EGS33429.1| negative regulator of genetic competence ClpC/MecB [Veillonella sp.
oral taxon 780 str. F0422]
Length = 808
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/750 (54%), Positives = 561/750 (74%), Gaps = 18/750 (2%)
Query: 78 GKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAAR 137
GK +GG + + T + V+ LAQ+ A GHNYIG+EH+LLGLL +G GVA +
Sbjct: 68 GKGTHSGGQL------QMTPRTKHVLDLAQQAANGRGHNYIGTEHILLGLLYDGSGVAMQ 121
Query: 138 VLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLD 197
+L G P ++ +V +VG + G S + + +Y +L + A++GK+D
Sbjct: 122 LLAAKGIRPEDVVEKVNAIVGGEEPSSNPTQGTASD---LGEISDYAIDLNESAKQGKID 178
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PV+GR +I+RV+QIL RRTKNNP LIGEPGVGKTAIAEGLAQRI SGDVPD + K++I
Sbjct: 179 PVIGRDTEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPDVLRDKRII 238
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
++ + ++AG KYRGEFEERLKK+M+E++ D++I+FIDE+HTLIGAGA EGA+DAANIL
Sbjct: 239 SVSLSSMLAGAKYRGEFEERLKKVMDEVQDHDDMIVFIDEIHTLIGAGATEGAMDAANIL 298
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARG Q IGATTLDEY+KHIEKD ALERRFQPV+V EPS ++ + ILKGLR+RYE
Sbjct: 299 KPALARGNFQVIGATTLDEYKKHIEKDAALERRFQPVQVGEPSEEDALSILKGLRDRYEA 358
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HK++ TDEAL +A LS +YI+DRFLPDKAID++DEA S+VR+ + + LE EL
Sbjct: 359 FHKVQITDEALAAAVHLSSRYIADRFLPDKAIDVMDEAASKVRMAVFTATPDVKALEDEL 418
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
Q+ KEK AV QDFE+A LRD+E +L++ I++ +E SK ++E+ VVTE
Sbjct: 419 VQVQKEKEAAVTAQDFERAATLRDKEKELESDIAS----KQEDSKKDSES---KLVVTES 471
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
+I +VS W+GIPV +V+ +ES+RLL++EE LH+RVIGQDEAV A+S+A+RRAR GLK+P
Sbjct: 472 EIAAVVSEWSGIPVSRVAEEESERLLRLEEELHQRVIGQDEAVVAVSKAVRRARAGLKDP 531
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
RPI SF+F GPTGVGK+ELA++LA+ FG E AMIR+DMSE+ME+H VS+L+G+PPGYV
Sbjct: 532 KRPIGSFLFLGPTGVGKTELARSLASNLFGDENAMIRIDMSEYMEKHAVSRLVGAPPGYV 591
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTEAVRRRPY+VVLFDE+EKAHPD FN++LQ+L+DGRLTD++GRTVDF+NT++
Sbjct: 592 GYDEGGQLTEAVRRRPYSVVLFDEVEKAHPDFFNILLQVLDDGRLTDNQGRTVDFRNTVI 651
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNR--IKSLVTEELKQYFRPEFLNRLDEMI 735
IMTSN+G+ +++ +GF E++S ++ +K V + +K +FRPEFLNR+DEMI
Sbjct: 652 IMTSNLGAKYLKEDTAAMGFLAAKGEEESGKDKASMKKDVLQAVKSHFRPEFLNRIDEMI 711
Query: 736 VFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAI 795
VF L +++ I I+L+ V RL + +EL+V++ ++V EG + + GARPL+RAI
Sbjct: 712 VFHALETEQLQSIVRILLQSVTTRLHEQGMELEVSDEAMNKIVAEGTDFAMGARPLKRAI 771
Query: 796 MRLLEDSMAEKMLAREIKEGDSVIVDVDSD 825
RL+ED +++ +L + EG ++ V V++D
Sbjct: 772 QRLVEDPISDAILEGKAGEGKTIHVVVEND 801
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M ER+TE A + + +AQE+A HNY+G+EHLLLGL+ E + V+AR L LG + +
Sbjct: 1 MIERYTEGAKRALAIAQEKAVEYKHNYVGTEHLLLGLVEEEKSVSARALLALGVEGKALE 60
Query: 151 TQVIRMVGESTEAVG 165
+VIR VG+ T + G
Sbjct: 61 QEVIRAVGKGTHSGG 75
>gi|295106036|emb|CBL03579.1| ATPases with chaperone activity, ATP-binding subunit [Gordonibacter
pamelaeae 7-10-1-b]
Length = 854
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/747 (54%), Positives = 554/747 (74%), Gaps = 13/747 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ + EA ++G +YI +EHLLLG++REG+G A VL LG +IR+ +
Sbjct: 82 FTPRVKRVLENSLREAMQMGQSYISTEHLLLGIVREGDGTALEVLTRLGVSGDDIRSALN 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+VG+S G L+E+GT+LT+ A +GKLDPV+GR +IERV+Q+L
Sbjct: 142 DLVGQSPVYAGRNAFDPQGQGSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLS 201
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RR KNNP LIGEPGVGKTA+AEGLAQ I S VPD + K++ TLD+ LVAG+KYRGEF
Sbjct: 202 RRQKNNPLLIGEPGVGKTAVAEGLAQLIVSNQVPDILRDKRLFTLDVSALVAGSKYRGEF 261
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK ++E+ + +IILFIDE+HTLIGAG+AEG+IDAA ILKP L+RGE+Q IGATT+
Sbjct: 262 EERLKKCIKEVMDAGDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTI 321
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKH+EKD ALERRFQP+ V EP+ ++ ++I++GLR+RYE HH++ +TDEAL +A L
Sbjct: 322 DEYRKHLEKDSALERRFQPITVGEPNEEQALRIMEGLRDRYEAHHQVHFTDEALQAAVTL 381
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ +YI DRFLPDKAID++DEAG+R+R+R+ LP+E R+L++ELR++ EK+ A+ QDFE
Sbjct: 382 ADRYIQDRFLPDKAIDVLDEAGARMRIRNMTLPKELRDLDEELRKLRAEKDGAIAAQDFE 441
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSK-AETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
+A +LRD E LK DK + K E A VT DI +VS TG+PV
Sbjct: 442 RAAQLRDEEAQLK-------DKRVQAEKDWEENAQKTIQQVTVEDIADVVSMTTGVPVSN 494
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ E+++LL+ME LH+RV+GQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+GVG
Sbjct: 495 LTEAETEKLLRMESVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVG 554
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL+KALA + F SE+A++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+RP
Sbjct: 555 KTELSKALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRP 614
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+NT++IMTSNVG+ I +
Sbjct: 615 YSVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNTVIIMTSNVGAREIAQ-PT 673
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
+GF + + S IKS V E+K+ FRPEFLNR+DE+IVF+ L ++ EI +M+
Sbjct: 674 TLGFSTE-EHAGLSDKEIKSRVMSEMKKLFRPEFLNRIDEIIVFKSLNDEQIAEIVKLMV 732
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
++ +RL +++ + +T+ + + +EG + ++GARPLRRAI RLLED ++E++L E K
Sbjct: 733 ADLRERLIAQNMSINLTDTACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEEIL--EGK 790
Query: 814 EGDSVIVDVDS-DGNVTVLNGSSGAPE 839
I+DVD+ DG + GS PE
Sbjct: 791 WSTGSIIDVDAVDGELVFTQGSGVVPE 817
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
FE+FT+KA KV++LAQ+EAR L Y+G+EH+LLGL++E +G+AA+ L+ G +
Sbjct: 3 FEKFTDKARKVLVLAQDEARSLHQPYVGTEHILLGLIQEKDGLAAQALDRKGVKYDAV-V 61
Query: 152 QVIRMV 157
Q IR V
Sbjct: 62 QAIRQV 67
>gi|126697592|ref|YP_001086489.1| class III stress response-related ATPase [Clostridium difficile
630]
gi|254973677|ref|ZP_05270149.1| ATP-dependent Clp protease [Clostridium difficile QCD-66c26]
gi|255091069|ref|ZP_05320547.1| ATP-dependent Clp protease [Clostridium difficile CIP 107932]
gi|255099184|ref|ZP_05328161.1| ATP-dependent Clp protease [Clostridium difficile QCD-63q42]
gi|255304967|ref|ZP_05349139.1| ATP-dependent Clp protease [Clostridium difficile ATCC 43255]
gi|255312722|ref|ZP_05354305.1| ATP-dependent Clp protease [Clostridium difficile QCD-76w55]
gi|255515482|ref|ZP_05383158.1| ATP-dependent Clp protease [Clostridium difficile QCD-97b34]
gi|255648575|ref|ZP_05395477.1| ATP-dependent Clp protease [Clostridium difficile QCD-37x79]
gi|306518705|ref|ZP_07405052.1| ATP-dependent Clp protease [Clostridium difficile QCD-32g58]
gi|384359346|ref|YP_006197198.1| ATP-dependent Clp protease [Clostridium difficile BI1]
gi|423080678|ref|ZP_17069297.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 002-P50-2011]
gi|423085125|ref|ZP_17073582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 050-P50-2011]
gi|423089367|ref|ZP_17077727.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 70-100-2010]
gi|115249029|emb|CAJ66840.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium difficile 630]
gi|357550773|gb|EHJ32582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 050-P50-2011]
gi|357552742|gb|EHJ34509.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 002-P50-2011]
gi|357558303|gb|EHJ39802.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 70-100-2010]
Length = 815
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/722 (55%), Positives = 550/722 (76%), Gaps = 20/722 (2%)
Query: 110 ARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTE---AVGA 166
A +L NYIG+EH+LL +++EGEG+A ++L G + + I M+G S +
Sbjct: 95 ANKLKTNYIGTEHILLAIIQEGEGIANKILNYAGVNDRTLAQLTIDMMGISDKNQYKAEN 154
Query: 167 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 226
G + + L++YG NLT A++ K+DPV+GR+ +I+RV+QIL RRTKNNP LIG+
Sbjct: 155 SYTGNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGD 214
Query: 227 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 286
PGVGKTAIAEGLA IA G+VP+T++ K + +L+MG L+AG KYRGEFEER+K++++E+
Sbjct: 215 PGVGKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVV 274
Query: 287 QSDEIILFIDEVHTLIGAGAA-EGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 345
++ IILFIDE+HT+IGAG+ EG+IDA+NILKP+LARGE+Q IGATT+DEYRKH+EKD
Sbjct: 275 KNGNIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDS 334
Query: 346 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 405
ALERRFQPV V EP+ +++I+IL+GLR++YE HHK++ TD+A+ +A +LS +YISDR+LP
Sbjct: 335 ALERRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLP 394
Query: 406 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 465
DKAIDLIDEA S+VRL+ P E ++LE E+ I KEK EAVR QDFEKA ++RD +
Sbjct: 395 DKAIDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGL 454
Query: 466 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 525
LK Q+ + ++ + SK ++ D G V+ EV V WTGIPV K+ +E+DRLL++
Sbjct: 455 LKKQLEDVRERWNKSSK-HSDLVD-GEVIAEV-----VGLWTGIPVNKILEEEADRLLRL 507
Query: 526 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 585
EE LH RVIGQ++AVK+IS+AIRR+R GLK+PNRPI SF+F GPTGVGK+EL+KALA
Sbjct: 508 EEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQ 567
Query: 586 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 645
FG E +IR+DMSE+ME+H VS++IGSPPGYVG+ EGGQLTE VRR PY+V+LFDEIEKA
Sbjct: 568 FGDENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKA 627
Query: 646 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL---D 700
HPDVFN++LQIL+DGRLTDSKGRTVDFKNT++IMTSNVG+S I GR+ +GF + D
Sbjct: 628 HPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTI---GRQKTLGFSIAKGD 684
Query: 701 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 760
+EK S Y ++K + ELKQ FRPEFLNR+D++IVF L + + +I +M ++ +RL
Sbjct: 685 EEEK-SQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERL 743
Query: 761 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
K DI+L++++ + + + G++ YGARPL+RA+ + LED ++E +L +K+G +V+
Sbjct: 744 KEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVA 803
Query: 821 DV 822
V
Sbjct: 804 KV 805
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F RFT++A K I LA E A+ LGHN +GSEH+LLGLLRE EG+AA+VL +G + +
Sbjct: 3 FNRFTQRAKKAIDLAFESAKSLGHNIVGSEHILLGLLREEEGIAAKVLSKVGFTEAYLEG 62
Query: 152 QVIRMVGESTE 162
+++ M G+ E
Sbjct: 63 KIVDMEGKGEE 73
>gi|269217199|ref|ZP_06161053.1| negative regulator of genetic competence ClpC/MecB [Slackia exigua
ATCC 700122]
gi|269129336|gb|EEZ60421.1| negative regulator of genetic competence ClpC/MecB [Slackia exigua
ATCC 700122]
Length = 874
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/746 (54%), Positives = 551/746 (73%), Gaps = 14/746 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
F+ A +++ A EA ++G YI +EHLLLG+LRE A RVL LG + +R+ +
Sbjct: 99 FSSAAKRILENALREAMQMGQTYISTEHLLLGILREDSCGALRVLSELGIEADAVRSALN 158
Query: 155 RMVGESTEAVGAGV---GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+VG+ + V G+ G LEE+GT+LTK A G LDPV+GR +IERV+Q
Sbjct: 159 DLVGKPS-PVAPGMPFFSGADPKGDSSMLEEFGTDLTKKARRGTLDPVIGRSAEIERVLQ 217
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RR KNNP LIGEPGVGKTA+AEGLA+ IA+G VPD I K+VITLD+ LVAG+KYR
Sbjct: 218 VLSRRQKNNPLLIGEPGVGKTAVAEGLAELIAAGQVPDIIRNKRVITLDVSALVAGSKYR 277
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFE+RLKK+++E+ ++ ++ILFIDE+HT+IGAG+AEG+IDAA ILKP L+RGE+Q IGA
Sbjct: 278 GEFEDRLKKVVKEVIKAGDVILFIDEMHTIIGAGSAEGSIDAAAILKPPLSRGEIQVIGA 337
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT +EYRKH+EKD AL RRFQ + V EPS ++ ++IL+GLR+RYE HH +RYTDEA+ SA
Sbjct: 338 TTTEEYRKHLEKDTALARRFQTITVGEPSEEQAVRILEGLRDRYEAHHHVRYTDEAIQSA 397
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+S +YI DRFLPDKAID++DEAG+R R+R+ LPEE +L+ ELR++ ++ +AV Q
Sbjct: 398 VSMSVRYIQDRFLPDKAIDVMDEAGARARIRNRVLPEEVLKLDDELRRVRNDREDAVAKQ 457
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
++EKA +LRD E L A+ + + KAE EA + + E +I +VS +G+PV
Sbjct: 458 EYEKAAKLRDEETVLTAK------RDEAQKKAEEEADAIVSEIGESEIAEVVSLASGVPV 511
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
++ DE+ +LL+ME LH+R+IGQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+G
Sbjct: 512 HDLTEDEAKKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKDPRRPAGSFIFLGPSG 571
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA + F SEEA+I DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLT+AVR+
Sbjct: 572 VGKTELSKALAEFLFSSEEALISFDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTKAVRQ 631
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY+VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+N ++IMTSNVG+ I
Sbjct: 632 HPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSNVGARDIVAS 691
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF D ++ S IKS V ELK+ FRPEFLNRLDE+IVF+ LTK ++ I ++
Sbjct: 692 A-PLGFAPD-NQVGLSDKEIKSRVMSELKKLFRPEFLNRLDEIIVFKSLTKDQIARIVEL 749
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M+ ++ DRL +++ + +TE R+ + +EG + + GARPLRRAI RLLED ++E++L E
Sbjct: 750 MVADLRDRLIEQNMTINLTEAARDHIAKEGTDTAMGARPLRRAIQRLLEDPISEQIL--E 807
Query: 812 IKEGDSVIVDVDSDGNVTVLNGSSGA 837
D ++DVD DG V GA
Sbjct: 808 GTWVDGSVIDVDFDGEKLVFTPGEGA 833
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%)
Query: 85 GFVVKAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 144
G V FE+FT+KA V++LAQ+EAR LG +GSE LLLGL++E EG+AA+ L +G
Sbjct: 5 GKVKHMAFEKFTDKARHVLILAQDEARALGAAEVGSEFLLLGLIQEPEGMAAQALSQVGI 64
Query: 145 DPSNIRTQVIRMVGES 160
R R ES
Sbjct: 65 VYDKARAVAARRTEES 80
>gi|339444381|ref|YP_004710385.1| chaperone ATPase [Eggerthella sp. YY7918]
gi|338904133|dbj|BAK43984.1| ATPase with chaperone activity, ATP-binding subunit [Eggerthella
sp. YY7918]
Length = 854
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/746 (54%), Positives = 559/746 (74%), Gaps = 11/746 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT + +V+ + EA ++G +YI +EHLLLG++REG+G A VL LG ++R+ +
Sbjct: 82 FTPRVKRVLENSLREAMQMGQSYISTEHLLLGIVREGDGTALEVLTRLGVSGDDVRSALN 141
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
+VG+S G ++G+ L+E+GT+LT+ A +GKLDPV+GR +IERV+Q+L
Sbjct: 142 DLVGQSPVYAGRNPFDPNAGSSDSVLKEFGTDLTQKARDGKLDPVIGRAGEIERVMQVLS 201
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RR KNNP LIGEPGVGKTA+ EGLAQ I S VPD + GK++ TLD+ LVAG+KYRGEF
Sbjct: 202 RRQKNNPLLIGEPGVGKTAVVEGLAQLIVSNQVPDILRGKRLFTLDVSALVAGSKYRGEF 261
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK ++E+ + +IILFIDE+HTLIGAG+AEG+IDAA ILKP L+RGE+Q IGATT+
Sbjct: 262 EERLKKCIKEVMDAKDIILFIDEMHTLIGAGSAEGSIDAAAILKPPLSRGEIQVIGATTI 321
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
DEYRKH+EKD ALERRFQP+ V EP+ ++ ++I++GLR+RYE HH++ +TD+AL +A L
Sbjct: 322 DEYRKHLEKDSALERRFQPITVGEPNEEQAMRIMEGLRDRYEAHHQVHFTDDALHAAVSL 381
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
S +YI DRFLPDKAID++DEAG+R+R+R+ LP+E REL+ ELR++ EK+ A+ QDFE
Sbjct: 382 SNRYIQDRFLPDKAIDVLDEAGARMRIRNMTLPKELRELDDELRKLRSEKDTAIGAQDFE 441
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
+A +LRD+E +LK + K +E ++ VT DI +VS TG+PV +
Sbjct: 442 RAAQLRDQESELKKKREEAEKKWEEDAQKSIHQ------VTVEDIADVVSMSTGVPVSNL 495
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ E+++LL+ME LH+RV+GQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+GVGK
Sbjct: 496 TEAETEKLLRMEAVLHERVVGQEEAVTALSKAIRRSRSGLKDPKRPAGSFIFLGPSGVGK 555
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+EL+KALA + F SE+A++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+RPY
Sbjct: 556 TELSKALAEFLFNSEDALLSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQRPY 615
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
+VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+N ++IMTSNVG+ I +
Sbjct: 616 SVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSNVGAREIAQ-PTT 674
Query: 695 IGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLK 754
+GF + + S IKS V E+K+ FRPEFLNR+DE+IVF+ LT ++ EI +M+
Sbjct: 675 LGFSAE-EHTGLSDKEIKSRVMAEMKKLFRPEFLNRIDEIIVFKSLTDEQIAEIVKLMVA 733
Query: 755 EVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 814
++ +RL +++ + +TE + + +EG + ++GARPLRRAI RLLED ++E++L E K
Sbjct: 734 DLRERLIAQNMSINLTEAACKLIAKEGTDATFGARPLRRAIQRLLEDPLSEEIL--EGKW 791
Query: 815 GDSVIVDVDS-DGNVTVLNGSSGAPE 839
I+DVD+ DG + GS PE
Sbjct: 792 ASGSIIDVDAVDGELVFTQGSGAIPE 817
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
FE+FT+KA KV++LAQ+EAR L Y+G+EH+LLGL++E +G+AA+ L+ L +
Sbjct: 3 FEKFTDKARKVLVLAQDEARSLHQPYVGTEHILLGLIQEKDGLAAQALDRLNVKYDGV-V 61
Query: 152 QVIRMV 157
Q IR V
Sbjct: 62 QAIRQV 67
>gi|260681795|ref|YP_003213080.1| ATP-dependent Clp protease [Clostridium difficile CD196]
gi|260685392|ref|YP_003216525.1| ATP-dependent Clp protease [Clostridium difficile R20291]
gi|260207958|emb|CBA60088.1| ATP-dependent Clp protease [Clostridium difficile CD196]
gi|260211408|emb|CBE01489.1| ATP-dependent Clp protease [Clostridium difficile R20291]
Length = 749
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/722 (55%), Positives = 550/722 (76%), Gaps = 20/722 (2%)
Query: 110 ARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTE---AVGA 166
A +L NYIG+EH+LL +++EGEG+A ++L G + + I M+G S +
Sbjct: 29 ANKLKTNYIGTEHILLAIIQEGEGIANKILNYAGVNDRTLAQLTIDMMGISDKNQYKAEN 88
Query: 167 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 226
G + + L++YG NLT A++ K+DPV+GR+ +I+RV+QIL RRTKNNP LIG+
Sbjct: 89 SYTGNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGD 148
Query: 227 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 286
PGVGKTAIAEGLA IA G+VP+T++ K + +L+MG L+AG KYRGEFEER+K++++E+
Sbjct: 149 PGVGKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVV 208
Query: 287 QSDEIILFIDEVHTLIGAGAA-EGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 345
++ IILFIDE+HT+IGAG+ EG+IDA+NILKP+LARGE+Q IGATT+DEYRKH+EKD
Sbjct: 209 KNGNIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDS 268
Query: 346 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 405
ALERRFQPV V EP+ +++I+IL+GLR++YE HHK++ TD+A+ +A +LS +YISDR+LP
Sbjct: 269 ALERRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLP 328
Query: 406 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 465
DKAIDLIDEA S+VRL+ P E ++LE E+ I KEK EAVR QDFEKA ++RD +
Sbjct: 329 DKAIDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGL 388
Query: 466 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 525
LK Q+ + ++ + SK ++ D G V+ EV V WTGIPV K+ +E+DRLL++
Sbjct: 389 LKKQLEDVRERWNKSSK-HSDLVD-GEVIAEV-----VGLWTGIPVNKILEEEADRLLRL 441
Query: 526 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 585
EE LH RVIGQ++AVK+IS+AIRR+R GLK+PNRPI SF+F GPTGVGK+EL+KALA
Sbjct: 442 EEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQ 501
Query: 586 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 645
FG E +IR+DMSE+ME+H VS++IGSPPGYVG+ EGGQLTE VRR PY+V+LFDEIEKA
Sbjct: 502 FGDENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKA 561
Query: 646 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL---D 700
HPDVFN++LQIL+DGRLTDSKGRTVDFKNT++IMTSNVG+S I GR+ +GF + D
Sbjct: 562 HPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTI---GRQKTLGFSIAKGD 618
Query: 701 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 760
+EK S Y ++K + ELKQ FRPEFLNR+D++IVF L + + +I +M ++ +RL
Sbjct: 619 EEEK-SQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERL 677
Query: 761 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
K DI+L++++ + + + G++ YGARPL+RA+ + LED ++E +L +K+G +V+
Sbjct: 678 KEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVA 737
Query: 821 DV 822
V
Sbjct: 738 KV 739
>gi|255654110|ref|ZP_05399519.1| ATP-dependent Clp protease [Clostridium difficile QCD-23m63]
gi|296449851|ref|ZP_06891618.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP08]
gi|296877915|ref|ZP_06901935.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP07]
gi|296261338|gb|EFH08166.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP08]
gi|296431112|gb|EFH16939.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP07]
Length = 815
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/722 (55%), Positives = 550/722 (76%), Gaps = 20/722 (2%)
Query: 110 ARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTE---AVGA 166
A +L NYIG+EH+LL +++EGEG+A ++L G + + I M+G S +
Sbjct: 95 ANKLKTNYIGTEHILLAIIQEGEGIANKILNYAGVNDRTLAQLTIDMMGISDKNQYKAEN 154
Query: 167 GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGE 226
G + + L++YG NLT A++ K+DPV+GR+ +I+RV+QIL RRTKNNP LIG+
Sbjct: 155 SYTGNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTKNNPVLIGD 214
Query: 227 PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK 286
PGVGKTAIAEGLA IA G+VP+T++ K + +L+MG L+AG KYRGEFEER+K++++E+
Sbjct: 215 PGVGKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVV 274
Query: 287 QSDEIILFIDEVHTLIGAGAA-EGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 345
++ IILFIDE+HT+IGAG+ EG+IDA+NILKP+LARGE+Q IGATT+DEYRKH+EKD
Sbjct: 275 KNGNIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDS 334
Query: 346 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 405
ALERRFQPV V EP+ +++I+IL+GLR++YE HHK++ TD+A+ +A +LS +YISDR+LP
Sbjct: 335 ALERRFQPVMVDEPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLP 394
Query: 406 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 465
DKAIDLIDEA S+VRL+ P E ++LE E+ I KEK EAVR QDFEKA ++RD +
Sbjct: 395 DKAIDLIDEAASKVRLKENTPPSEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGL 454
Query: 466 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 525
LK Q+ + ++ + SK ++ D G V+ EV V WTGIPV K+ +E+DRLL++
Sbjct: 455 LKKQLEDVRERWSKSSK-HSDLVD-GEVIAEV-----VGLWTGIPVNKILEEEADRLLRL 507
Query: 526 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 585
EE LH RVIGQ++AVK+IS+AIRR+R GLK+PNRPI SF+F GPTGVGK+EL+KALA
Sbjct: 508 EEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQ 567
Query: 586 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 645
FG E +IR+DMSE+ME+H VS++IGSPPGYVG+ EGGQLTE VRR PY+V+LFDEIEKA
Sbjct: 568 FGDENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKA 627
Query: 646 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR--IGFDL---D 700
HPDVFN++LQIL+DGRLTDSKGRTVDFKNT++IMTSNVG+S I GR+ +GF + D
Sbjct: 628 HPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTI---GRQKTLGFSIAKGD 684
Query: 701 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 760
+EK S Y ++K + ELKQ FRPEFLNR+D++IVF L + + +I +M ++ +RL
Sbjct: 685 EEEK-SQYEKMKENIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERL 743
Query: 761 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
K DI+L++++ + + + G++ YGARPL+RA+ + LED ++E +L +K+G +V+
Sbjct: 744 KEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVA 803
Query: 821 DV 822
V
Sbjct: 804 KV 805
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F RFT++A K I LA E A+ LGHN +GSEH+LLGLLRE EG+AA+VL +G + +
Sbjct: 3 FNRFTQRAKKAIDLAFESAKGLGHNIVGSEHILLGLLREEEGIAAKVLSKVGFTEAYLEG 62
Query: 152 QVIRMVGESTE 162
+++ M G+ E
Sbjct: 63 KIVDMEGKGEE 73
>gi|410727947|ref|ZP_11366140.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. Maddingley MBC34-26]
gi|410597507|gb|EKQ52118.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. Maddingley MBC34-26]
Length = 823
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/712 (54%), Positives = 539/712 (75%), Gaps = 8/712 (1%)
Query: 110 ARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV-IRMVGESTEAVGAGV 168
A++L H Y+ EH+LL LL + EG+A +L++L + + I ++ + + G + V
Sbjct: 96 AKKLNHKYVSPEHILLALLNQEEGMAYTILKSLNINFTIISEELLVFLSGTYEDKVSDKN 155
Query: 169 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG 228
S P L++YG +LT L+ EG LDPV+GR + +R+++IL RR KNNPCLIGEPG
Sbjct: 156 IAESKKANTPMLDKYGRDLTALSSEGTLDPVIGRDSETQRLLEILCRRIKNNPCLIGEPG 215
Query: 229 VGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS 288
VGKTA+ EGLAQRI G++P+ ++ K+V++LD+ ++AG KYRGEFEERLKK MEEI +
Sbjct: 216 VGKTAVVEGLAQRIVEGNIPEILKNKRVVSLDLTSMIAGAKYRGEFEERLKKTMEEIIKD 275
Query: 289 DEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALE 348
II+FIDE+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALE
Sbjct: 276 KNIIIFIDEIHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDSALE 335
Query: 349 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKA 408
RRFQPV V EP+ +ET++ILKGLR++YE HH++ TDEAL +A LS +YI+DRF+PDKA
Sbjct: 336 RRFQPVTVGEPTKEETLEILKGLRDKYEAHHRVEITDEALEAAVNLSDRYITDRFMPDKA 395
Query: 409 IDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKA 468
IDLIDE ++VR+++ P + ++LE+++ I KEK EA+R QDFE+A LRD+E +LK
Sbjct: 396 IDLIDEGAAKVRIQNLTAPPDLKDLEEKIENIGKEKEEAIRVQDFERAANLRDKERNLKD 455
Query: 469 QISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEET 528
++S++ D +T+ VV I +VS+WT IP+EK++ ES+RLL +E
Sbjct: 456 KLSSMKDNW------DTQNSIKLLVVNAEKIASVVSSWTKIPIEKLTESESERLLNLENI 509
Query: 529 LHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS 588
LHKRV+GQ+EAVK+I+RA+RRARVG+K+PNRPI SFIF GPTGVGK+EL+KALA FG
Sbjct: 510 LHKRVVGQNEAVKSIARAVRRARVGIKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGD 569
Query: 589 EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD 648
E ++IR+DMSE+ME H+VS+LIGSPPGYVG+ EGGQLTEAVRR+PY++VL DEIEKA+P+
Sbjct: 570 ENSIIRIDMSEYMESHSVSRLIGSPPGYVGHEEGGQLTEAVRRKPYSIVLLDEIEKANPE 629
Query: 649 VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSY 708
VFN++LQI+EDGRLTD KG+ V+FKNT++IMTSNVG+ I+K + IGF+ ++ Y
Sbjct: 630 VFNILLQIMEDGRLTDGKGKVVNFKNTIIIMTSNVGAHQIKK-QKSIGFNTGSSGDETEY 688
Query: 709 NRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQ 768
++K + ELKQ FRPEFLNR+D+ IVF +L+ ++ +I D+ML + RL+ ++I L
Sbjct: 689 EKMKENILGELKQKFRPEFLNRIDDTIVFHKLSDEDLNQIVDLMLASIRKRLEDREIYLN 748
Query: 769 VTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
+ ++ ++ +G + YGARPLRR I++ +ED ++E++L I+ GD V V
Sbjct: 749 FGDDSKKFLLSKGIDLDYGARPLRRLIIKEVEDRLSEEILQGNIRIGDKVKV 800
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
+ + TE+A VI+ A+ E+ + H Y+G+EH+LLG+L+E +G +A++L+ G D IRT
Sbjct: 3 YNKLTERAQVVILEAENESEKFKHGYVGTEHMLLGILKE-DGYSAKLLKKYGVDSEKIRT 61
Query: 152 QVIRMVG 158
+ R +G
Sbjct: 62 MIQRYLG 68
>gi|402829159|ref|ZP_10878040.1| Clp amino terminal domain protein [Slackia sp. CM382]
gi|402284913|gb|EJU33406.1| Clp amino terminal domain protein [Slackia sp. CM382]
Length = 865
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/746 (54%), Positives = 551/746 (73%), Gaps = 14/746 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
F+ A +++ A EA ++G YI +EHLLLG+LRE A RVL LG + +R+ +
Sbjct: 90 FSSAAKRILENALREAMQMGQTYISTEHLLLGILREDACGALRVLSELGIEADAVRSALN 149
Query: 155 RMVGESTEAVGAGV---GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+VG+ + V G+ G LEE+GT+LTK A G LDPV+GR +IERV+Q
Sbjct: 150 DLVGKPS-PVAPGMPFFSGADPKGDSSMLEEFGTDLTKKARRGTLDPVIGRSAEIERVLQ 208
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RR KNNP LIGEPGVGKTA+AEGLA+ IA+G VPD I K+VITLD+ LVAG+KYR
Sbjct: 209 VLSRRQKNNPLLIGEPGVGKTAVAEGLAELIAAGQVPDIIRDKRVITLDVSALVAGSKYR 268
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFE+RLKK+++E+ ++ ++ILFIDE+HT+IGAG+AEG+IDAA ILKP L+RGE+Q IGA
Sbjct: 269 GEFEDRLKKVVKEVIKAGDVILFIDEMHTIIGAGSAEGSIDAAAILKPPLSRGEIQVIGA 328
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT +EYRKH+EKD AL RRFQ + V EPS ++ ++IL+GLR+RYE HH +RYTDEA+ SA
Sbjct: 329 TTTEEYRKHLEKDTALARRFQTITVGEPSEEQAVRILEGLRDRYEAHHHVRYTDEAIQSA 388
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+S +YI DRFLPDKAID++DEAG+R R+R+ LPEE +L+ ELR++ ++ +AV Q
Sbjct: 389 VSMSVRYIQDRFLPDKAIDVMDEAGARARIRNRVLPEEVLKLDDELRRVRNDREDAVAKQ 448
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
++EKA +LRD E L A+ + + KAE EA + + E +I +VS +G+PV
Sbjct: 449 EYEKAAKLRDEETVLTAK------RDEAQKKAEEEADAIVSEIGESEIAEVVSLASGVPV 502
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
++ DE+ +LL+ME LH+R+IGQ+EAV A+S+AIRR+R GLK+P RP SFIF GP+G
Sbjct: 503 HDLTEDEAKKLLRMEGVLHERIIGQEEAVTALSKAIRRSRSGLKDPRRPAGSFIFLGPSG 562
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA + F SEEA+I DMSE+ME+HTVS+LIGSPPGYVG+ EGGQLT+AVR+
Sbjct: 563 VGKTELSKALAEFLFSSEEALISFDMSEYMEKHTVSRLIGSPPGYVGFDEGGQLTKAVRQ 622
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
PY+VVLFDEIEKAHPDVFN++LQILE+GRLTD++GRTVDF+N ++IMTSNVG+ I
Sbjct: 623 HPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDAQGRTVDFRNAVIIMTSNVGARDIVAS 682
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF D ++ S IKS V ELK+ FRPEFLNRLDE+IVF+ LTK ++ I ++
Sbjct: 683 A-PLGFAPD-NQVGLSDKEIKSRVMSELKKLFRPEFLNRLDEIIVFKSLTKDQIARIVEL 740
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M+ ++ DRL +++ + +TE R+ + +EG + + GARPLRRAI RLLED ++E++L E
Sbjct: 741 MVADLRDRLIEQNMTINLTEAARDHIAKEGTDTAMGARPLRRAIQRLLEDPISEQIL--E 798
Query: 812 IKEGDSVIVDVDSDGNVTVLNGSSGA 837
D ++DVD DG V GA
Sbjct: 799 GTWVDGSVIDVDFDGEKLVFTPGEGA 824
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
FE+FT+KA V++LAQ+EAR LG +GSE LLLGL++E EG+AA+ L +G R
Sbjct: 3 FEKFTDKARHVLILAQDEARALGAAEVGSEFLLLGLIQEPEGMAAQALSQVGIVYDKARA 62
Query: 152 QVIRMVGES 160
R ES
Sbjct: 63 VAARRTEES 71
>gi|449134535|ref|ZP_21770031.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
gi|448886810|gb|EMB17203.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
Length = 847
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/757 (52%), Positives = 554/757 (73%), Gaps = 31/757 (4%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KVI + EEAR L H+Y+G+EH+LLGLLRE EGVAA+VL NLG ++R +V+
Sbjct: 70 TPRAKKVIEYSMEEARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLN 129
Query: 156 MVGESTEAVGAGVGGGSSGN------------------KMPTLEEYGTNLTKLAEEGKLD 197
++G E GA VG K P L+ +G +LT+LA++G+LD
Sbjct: 130 LLGHGLE--GAEVGERGGRGGDGEGSSGGSGSSKSGKSKTPALDSFGRDLTELAKKGELD 187
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PV+GR+ +IER +QIL RRTKNNP L+GE GVGKTAI EG AQR+ G+VP+ + K+++
Sbjct: 188 PVIGREREIERAIQILCRRTKNNPVLLGEAGVGKTAIIEGFAQRVVGGEVPEILAEKRIV 247
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
LD+ ++VAGTKYRG+FEER+K +M E+++ ILFIDE+HTL+GAG AEGAIDAAN+L
Sbjct: 248 VLDLAMMVAGTKYRGQFEERIKAVMTEVRRVKNTILFIDELHTLVGAGGAEGAIDAANVL 307
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGE+QCIGATTLDEYRK+IEKD AL RRFQ + V ETI+ILKGLRERYE
Sbjct: 308 KPALARGEIQCIGATTLDEYRKYIEKDNALARRFQEIMVEPTGKTETIEILKGLRERYEE 367
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++++TD+A+V+A ++S +YI+ R LPDKAID+IDEAG+RVRLR P + +E+++++
Sbjct: 368 HHRVQFTDDAVVAAVEMSERYITARCLPDKAIDVIDEAGARVRLRTMTRPPDLKEIDEQV 427
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
+ K+K +AV QDFEKA LRD+ L+ + + + +E S+ +T+ VV E
Sbjct: 428 ETLNKDKEDAVANQDFEKAANLRDQAEKLRKKKEQITQEWREKSQ-QTDG-----VVDEE 481
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
I +VS TGIP+ ++ST++S RLLKMEE LHKRV+ Q +AV A+++A+RR+R GLK+P
Sbjct: 482 IIAEVVSKMTGIPLTRLSTEDSLRLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDP 541
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
RP SFIF+GPTGVGK+ LAKALA Y FG +A++ +DMSE+ME+H VS+LIG+PPG+V
Sbjct: 542 KRPTGSFIFAGPTGVGKTLLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFV 601
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTE +RRRPY VVLFDEIEKAHPDVFNM+LQ++E+GRLTDS GR VDF+NT+L
Sbjct: 602 GYEEGGQLTEKIRRRPYAVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTIL 661
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
IMT+N G+ I+ F + D+SY+ +KS V +++++ FRPEFLNRLD+ I+F
Sbjct: 662 IMTTNAGAEAIKNES---AFGFQKPDGDASYDSMKSRVMDQIERVFRPEFLNRLDDTIIF 718
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
R LT ++K + D L +V +RL + + + +++ +E ++++G N YGARPLRRAI +
Sbjct: 719 RHLTTTDLKGVIDFELSKVRERLLDRGLAIDLSDEAKEFLIKKGSNLDYGARPLRRAIEQ 778
Query: 798 LLEDSMAEKMLAREIKEGDSVIVDV--DSDGNVTVLN 832
+ED + E++L + D++I+DV D G +T LN
Sbjct: 779 RIEDPLGEELLRGAFEGKDTIIIDVHKDDSGKITRLN 815
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 103 IMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTE 162
+ LA +EA+R H YIG+EH+LLGL++EG GVAA VL+NL D IR +V ++V E
Sbjct: 1 MQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKLVQSGPE 60
Query: 163 AVGAG 167
V G
Sbjct: 61 MVTVG 65
>gi|332295625|ref|YP_004437548.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178728|gb|AEE14417.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 800
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/725 (54%), Positives = 548/725 (75%), Gaps = 22/725 (3%)
Query: 101 KVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGES 160
KV+ +A+EEA RL ++G +H+L+ +++EGE A+R+L G + Q+++ + +
Sbjct: 91 KVLDIAEEEAIRLKDEFVGVDHVLIAIVKEGESPASRLLNEYGITEEKV-YQILKDIRGT 149
Query: 161 TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 220
G + K LE+Y NLT+LA EGKLDPV+GR +IERV+QIL RRTKNN
Sbjct: 150 QRVTDPG-----AEEKYQALEKYTRNLTQLALEGKLDPVIGRDEEIERVMQILSRRTKNN 204
Query: 221 PCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKK 280
P LIGEPGVGKTAI +G+AQ+IAS DVP+ ++GK+++ LDMG L+AGTK+RGEFEERLK
Sbjct: 205 PVLIGEPGVGKTAIVDGIAQKIASNDVPEILKGKQLLALDMGALIAGTKFRGEFEERLKT 264
Query: 281 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKH 340
+++ + ++ ILFIDE+HT++GAGAAEGAIDA+N+LKP+LARGEL+ IGATTLDEY+K+
Sbjct: 265 IIDSVTKTQNYILFIDELHTVVGAGAAEGAIDASNLLKPALARGELRVIGATTLDEYKKY 324
Query: 341 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYIS 400
IEKDPALERRFQPV V EPSVD+TI ILKGLR++YE HH+++ TDEA+ SAA LS +YIS
Sbjct: 325 IEKDPALERRFQPVFVKEPSVDDTISILKGLRDKYEAHHRVKITDEAIESAAHLSERYIS 384
Query: 401 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 460
DRFLPDKAIDLIDEA ++VR++ + +P E +E+E +L ++ +E EAV+ +D+E A +
Sbjct: 385 DRFLPDKAIDLIDEAAAKVRIQLSNMPTELKEMENKLSRLYQEGQEAVKREDYELAAK-- 442
Query: 461 DREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESD 520
LK++ AL + KE V VV + DI ++VS WTGIPV ++ +E D
Sbjct: 443 -----LKSESEALSKEFKEKRDKWLIDKKVNEVVDKEDIANLVSKWTGIPVTELVQEEVD 497
Query: 521 RLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 580
+L ME LHKR+IGQDEAV A+S AIRR+R GLK+P RP+ SF+F GPTGVGK+EL+KA
Sbjct: 498 KLTNMESILHKRIIGQDEAVVAVSEAIRRSRSGLKDPRRPVGSFLFLGPTGVGKTELSKA 557
Query: 581 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 640
LAA+ F E A++R+DMSE+ME+H+VS+L+G+PPGYVGY EGGQLTE +RRRPY+V+L D
Sbjct: 558 LAAFLFKDENALVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEVIRRRPYSVILLD 617
Query: 641 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 700
EIEKAHPDVFN++LQ+L+DGRLTD KGRT+DF+NT++IMTSN+GS ++ D
Sbjct: 618 EIEKAHPDVFNILLQVLDDGRLTDGKGRTIDFRNTVIIMTSNLGSDILLNSNVE-----D 672
Query: 701 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRL 760
E + + NR+ SL L FRPEFLNR+DE++VF+ L++ ++++I +++L ++ +RL
Sbjct: 673 EREFEKAKNRVLSL----LNSTFRPEFLNRIDEIVVFKPLSRSDIEKIVELILNDIQERL 728
Query: 761 KTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
K I+L +TE ++ +EGY P+ GARPL+R I + LE+ +A+++L +IKEGD+V +
Sbjct: 729 NEKKIKLILTEEAKKFFAKEGYEPTMGARPLKRYIQKNLENLIAKELLNNKIKEGDTVKI 788
Query: 821 DVDSD 825
VD++
Sbjct: 789 VVDNN 793
>gi|399526611|ref|ZP_10766373.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
gi|398362852|gb|EJN46519.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
Length = 822
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/742 (57%), Positives = 564/742 (76%), Gaps = 17/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 80 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 139
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 140 QMLSGYQRGDDEGRESVGAGVGGSGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRVE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ +LDMG LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDKQIYSLDMGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSVDET++ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTNDEYRKYIEKDAALERRFQPVKVEEPSVDETVEILKGLRDRYEAHHRVIITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+R+R P E REL++++ ++ + K
Sbjct: 380 AAIQAAAELADRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEKIAEVRRNKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD E L + K KE + E+ ++ V + +I +++
Sbjct: 440 AAIDDQDFEKAASLRDEESKLSEE-----RKAKEEAWKGGESDEIAE-VGDQEIAEVLAM 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LLKME+ LHKRVIGQDEAVKA++++IRR R GLK+PNRP SFI
Sbjct: 494 STGIPVVRLTQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 554 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D Y R+KS V EELKQ+FRPEFLNR+D+ IVF LTK E+
Sbjct: 674 RDINK-GVLTGFQT-ADNSTHDYGRMKSKVAEELKQHFRPEFLNRVDDTIVFPPLTKPEI 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
I D+M+ ++ R++ +D+ LQ+T+ RE + + G++P GARPLRRAI R +ED+++E
Sbjct: 732 ARIVDLMIAKLAKRMEAQDMRLQLTDEARELLADVGFDPVLGARPLRRAIQREIEDALSE 791
Query: 806 KMLAREIKEGDSVIVDVDSDGN 827
++L E++ G V V V +G
Sbjct: 792 RILFGELQPGQVVTVGVTGEGK 813
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE + +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLISEGEGVAAKALETMEIKGEAVR 60
Query: 151 TQVIRMVGESTEAV 164
VI ++GE + V
Sbjct: 61 ASVIEIIGEGEKPV 74
>gi|421611123|ref|ZP_16052274.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
gi|408497937|gb|EKK02445.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
Length = 859
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/757 (52%), Positives = 555/757 (73%), Gaps = 31/757 (4%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KVI + EEAR L H+Y+G+EH+LLGLLRE EGVAA+VL NLG ++R +V+
Sbjct: 82 TPRAKKVIEYSMEEARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLN 141
Query: 156 MVGESTEAVGAGVGGGSSGN------------------KMPTLEEYGTNLTKLAEEGKLD 197
++G E GA VG K P L+ +G +LT+LA++G+LD
Sbjct: 142 LLGHGLE--GAEVGERGGRGGDGEGSSGGSGSSKSGKSKTPALDSFGRDLTELAKKGELD 199
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PV+GR+ +IER +QIL RRTKNNP L+GE GVGKTAI EG AQR+ G+VP+ + K+++
Sbjct: 200 PVIGREREIERAIQILCRRTKNNPVLLGEAGVGKTAIIEGFAQRVVGGEVPEILAEKRIV 259
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
LD+ ++VAGTKYRG+FEER+K +M E+++ ILFIDE+HTL+GAG AEGAIDAAN+L
Sbjct: 260 VLDLAMMVAGTKYRGQFEERIKAVMTEVRRVKNTILFIDELHTLVGAGGAEGAIDAANVL 319
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGE+QCIGATTLDEYRK+IEKD AL RRFQ + V +ETI+ILKGLRERYE
Sbjct: 320 KPALARGEIQCIGATTLDEYRKYIEKDNALARRFQEIMVEPTGKEETIEILKGLRERYEE 379
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++++TD+A+V+A ++S +YI+ R LPDKAID+IDEAG+RVRLR P + +E+++++
Sbjct: 380 HHRVQFTDDAVVAAVEMSERYITARCLPDKAIDVIDEAGARVRLRTMTRPPDLKEIDEQV 439
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
+ K+K +AV QDFEKA LRD+ L+ + + + +E S+ +T+ VV E
Sbjct: 440 ETLNKDKEDAVANQDFEKAANLRDQAEKLRKKKEQITQEWREKSQ-QTDG-----VVDEE 493
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
I +VS TGIP+ ++ST++S RLLKMEE LHKRV+ Q +AV A+++A+RR+R GLK+P
Sbjct: 494 IIAEVVSKMTGIPLTRLSTEDSLRLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDP 553
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
RP SFIF+GPTGVGK+ LAKALA Y FG +A++ +DMSE+ME+H VS+LIG+PPG+V
Sbjct: 554 KRPTGSFIFAGPTGVGKTLLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFV 613
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTE +RRRPY VVLFDEIEKAHPDVFNM+LQ++E+GRLTDS GR VDF+NT+L
Sbjct: 614 GYEEGGQLTEKIRRRPYAVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTIL 673
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
IMT+N G+ I+ F + D+SY+ +KS V +++++ FRPEFLNRLD+ I+F
Sbjct: 674 IMTTNAGAEAIKNES---AFGFQKPDGDASYDSMKSRVMDQIERVFRPEFLNRLDDTIIF 730
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
R LT ++K + D L +V +RL + + + +++ +E ++++G N YGARPLRRAI +
Sbjct: 731 RHLTTTDLKGVIDFELSKVRERLLDRGLAIDLSDEAKEFLIKKGSNLDYGARPLRRAIEQ 790
Query: 798 LLEDSMAEKMLAREIKEGDSVIVDV--DSDGNVTVLN 832
+ED + E++L + D++I+DV D G +T LN
Sbjct: 791 RIEDPLGEELLRGAFEGKDTIIIDVHKDDSGKITRLN 827
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ERFT++A KV+ LA +EA+R H YIG+EH+LLGL++EG GVAA VL+NL D IR
Sbjct: 1 MYERFTDRARKVMQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIR 60
Query: 151 TQVIRMVGESTEAVGAG 167
+V ++V E V G
Sbjct: 61 LEVEKLVQSGPEMVTVG 77
>gi|187934389|ref|YP_001884443.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum B str. Eklund 17B]
gi|187722542|gb|ACD23763.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B str. Eklund 17B]
Length = 814
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/735 (54%), Positives = 549/735 (74%), Gaps = 9/735 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV- 153
T +A K++ + EA++ H + EH+L+ LL + EG+A +L+NL + I+ ++
Sbjct: 83 LTPRAKKLLDESFMEAKKFSHKNVSPEHILMALLNQEEGMAYTILKNLKLNFKEIKDKLF 142
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
I + G+ ++ S K P L++YG +LT+ A +G LDPV+GR + +RV++IL
Sbjct: 143 IFLNGQYSDENEEIKSPRSEKTKTPMLDKYGRDLTQFARDGGLDPVIGRDLENQRVLEIL 202
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RR KNNPCLIGEPGVGKTA+ EGLAQRI G++P+ + GK++++LD+ L+AG KYRGE
Sbjct: 203 CRRIKNNPCLIGEPGVGKTAVIEGLAQRIVEGNIPEILRGKRIVSLDLTALLAGAKYRGE 262
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FE+RLKK+M EI++ II+FIDE+HT+IGAGAAEGAIDA+NILKP+L+RGE+QCIGATT
Sbjct: 263 FEDRLKKVMLEIEKDKSIIIFIDEIHTIIGAGAAEGAIDASNILKPALSRGEIQCIGATT 322
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
++EYRKHIEKD ALERRFQPV V EPS DET+ IL+GLRE+YE HH + TD+AL +A +
Sbjct: 323 INEYRKHIEKDSALERRFQPVNVGEPSKDETLIILRGLREKYEEHHNVNITDKALEAAVE 382
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YI+DRF+PDKAIDLIDEA ++VR+++ P + +E E+++ TKEK E +R QDF
Sbjct: 383 LSDRYITDRFMPDKAIDLIDEACAKVRIKNLIPPANLKSMEDEIKETTKEKEECIRVQDF 442
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EKA +RD E DLK ++ AL KE S + V E DI +VS+WT IP +K
Sbjct: 443 EKAANMRDIENDLKEELEAL---RKEWSDKNSNK---QLNVDEEDIAEVVSSWTKIPAKK 496
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES++LLK+E L KRVIGQ EAV++I++A+RRARVG+K+PNRPI +FIF GPTGVG
Sbjct: 497 LTEKESEKLLKLENILQKRVIGQTEAVESIAKAVRRARVGIKDPNRPIGTFIFLGPTGVG 556
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+EL+KALA FG E ++IR+DMSE+ME ++VSKLIGSPPGYVGY +GGQLTEAVRR+P
Sbjct: 557 KTELSKALAETMFGDENSIIRIDMSEYMESNSVSKLIGSPPGYVGYDDGGQLTEAVRRKP 616
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+VVL DEIEKAH DVFN++LQI+EDGRLTDS G+ V+FKNT++IMTSNVG+ I+K +
Sbjct: 617 YSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGKVVNFKNTIVIMTSNVGAHQIKK-QK 675
Query: 694 RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIML 753
IGF+ DE +S Y ++K V EELK+ F+PEFLNR+D+ IVF +L + ++ +I D+ML
Sbjct: 676 TIGFNTSIDE-NSEYEKMKDNVLEELKRSFKPEFLNRIDDTIVFHKLKEDDLLDIVDLML 734
Query: 754 KEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 813
K + RL+ KDI L + ++ ++ + + +YGARPLRR I + +ED ++E++L IK
Sbjct: 735 KSITKRLENKDIHLNFEKDSKKFLINKRIDLNYGARPLRRIITKEVEDKLSEEILLGNIK 794
Query: 814 EGDSVIVDVDSDGNV 828
GD + V+ D V
Sbjct: 795 IGDRIKVNESKDNLV 809
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F +FTE+ +I+ AQ E++ H Y+G+EHLLLGL++E +G + +L G D +R
Sbjct: 5 FNKFTERTQSIILEAQIESQEFKHGYVGTEHLLLGLVKE-KGQQSNILNEFGIDAEIVRD 63
Query: 152 QVIRMVG 158
+ R +G
Sbjct: 64 MISRYLG 70
>gi|283779663|ref|YP_003370418.1| ATPase AAA [Pirellula staleyi DSM 6068]
gi|283438116|gb|ADB16558.1| ATPase AAA-2 domain protein [Pirellula staleyi DSM 6068]
Length = 852
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/760 (53%), Positives = 553/760 (72%), Gaps = 35/760 (4%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KVI + EEAR L HNY+G+EH+LLGLLRE EGVAA+VL NLG +R +V+
Sbjct: 82 TPRAKKVIEYSMEEARNLNHNYVGTEHILLGLLREQEGVAAQVLMNLGLKLEEVREEVLN 141
Query: 156 MVG---------------------ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEG 194
++G +S E AG G S +K P L+ +G +LT+LA +
Sbjct: 142 LLGHGLEGESTGERGGREGVGVGGQSGEQQAAGRG---SKSKTPALDSFGRDLTELARQN 198
Query: 195 KLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGK 254
KLDPV+GR+ +IER +Q+L RRTKNNP L+GE GVGKTAI EG AQR+ +G VP+ + K
Sbjct: 199 KLDPVIGREREIERAIQVLCRRTKNNPVLLGEAGVGKTAIVEGFAQRVVAGSVPEILADK 258
Query: 255 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 314
+++ LD+ ++VAGTKYRG+FEER+K +M E++++ ILFIDE+HTL+GAG AEGAIDAA
Sbjct: 259 RIVVLDLAMMVAGTKYRGQFEERIKAVMNEVRRARNTILFIDELHTLVGAGGAEGAIDAA 318
Query: 315 NILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRER 374
N+LKP+LARGE+QCIGATTLDEYRK+IEKD AL RRFQ + V S DET++ILKGLRE+
Sbjct: 319 NVLKPALARGEIQCIGATTLDEYRKYIEKDAALARRFQEIIVEPTSKDETVEILKGLREK 378
Query: 375 YEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELE 434
YE HH+++ TD+ALV+AA+ S +YI+ R LPDKAID+IDEAG+RVRLR P + +E++
Sbjct: 379 YEDHHRVQITDDALVAAAEYSERYITARCLPDKAIDVIDEAGARVRLRAMTRPPDLKEID 438
Query: 435 KELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVV 494
E+ ++ KEK EAV QDFEKA LRD+ LK + + + ++ S+ ET+ VV
Sbjct: 439 DEVERLNKEKEEAVANQDFEKAAALRDQADKLKRKKDNITKEWRDKSR-ETDG-----VV 492
Query: 495 TEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGL 554
E I +VS TGIP+ ++ST++S RL+KMEE LHK+VI QD+AV AI++A+RR R GL
Sbjct: 493 DEEVIAEVVSKMTGIPLTRMSTEDSLRLMKMEEELHKKVISQDQAVTAIAKAVRRTRSGL 552
Query: 555 KNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 614
K+P RP F+F+GPTGVGK+ LAKALA + FG +A+I++DMSE+ME+H VS+LIG+PP
Sbjct: 553 KDPRRPAGCFVFAGPTGVGKTLLAKALAEFMFGDADALIQIDMSEYMEKHNVSRLIGAPP 612
Query: 615 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 674
GYVGY EGGQLTE +RRRPY VVL DEIEKAHPDVFN +LQ++E+GRLTDS GR VDF+N
Sbjct: 613 GYVGYEEGGQLTEKIRRRPYAVVLLDEIEKAHPDVFNTLLQVMEEGRLTDSFGRRVDFRN 672
Query: 675 TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 734
+LIMT+N G+ I+ F + D+SY+ +K+ V + +++ FRPEFLNRLD++
Sbjct: 673 VILIMTTNAGAEAIKNES---DFGFRQGDTDASYDGMKARVMDRIERVFRPEFLNRLDDV 729
Query: 735 IVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRA 794
IVF+ LTK +K + D+ L +V RL + ++L++T+ +E ++++G N +GARPLRRA
Sbjct: 730 IVFQHLTKDNLKLVIDLELLKVRQRLAERGLQLELTDTAKEFIIKKGSNTDFGARPLRRA 789
Query: 795 IMRLLEDSMAEKMLAREIKEGDSVIVDV--DSDGNVTVLN 832
+ +ED +AE++L E + D + VD D +G + L+
Sbjct: 790 VENYIEDPLAEELLKGEFQGKDLIQVDAIRDDEGKLRRLD 829
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ERFT++A KV+ LA +EA+R H YIG+EH+LLGL++EG GVAA VL+NL D IR
Sbjct: 1 MYERFTDRARKVMQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLDVDLRKIR 60
Query: 151 TQVIRMVGESTEAVGAG 167
+V ++V E V G
Sbjct: 61 LEVEKLVQSGPEMVTMG 77
>gi|32474446|ref|NP_867440.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
gi|32444984|emb|CAD74986.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
Length = 859
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/757 (52%), Positives = 554/757 (73%), Gaps = 31/757 (4%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KVI + EEAR L H+Y+G+EH+LLGLLRE EGVAA+VL NLG ++R +V+
Sbjct: 82 TPRAKKVIEYSMEEARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLN 141
Query: 156 MVGESTEAVGAGVGGGSSGN------------------KMPTLEEYGTNLTKLAEEGKLD 197
++G E GA VG K P L+ +G +LT+LA++G+LD
Sbjct: 142 LLGHGLE--GAEVGERGGRGGDGEGSSGGSGSSKSGKSKTPALDSFGRDLTELAKKGELD 199
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PV+GR+ +IER +QIL RRTKNNP L+GE GVGKTAI EG AQR+ G+VP+ + K+++
Sbjct: 200 PVIGREREIERAIQILCRRTKNNPVLLGEAGVGKTAIIEGFAQRVVGGEVPEILAEKRIV 259
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
LD+ ++VAGTKYRG+FEER+K +M E+++ ILFIDE+HTL+GAG AEGAIDAAN+L
Sbjct: 260 VLDLAMMVAGTKYRGQFEERIKAVMTEVRRVKNTILFIDELHTLVGAGGAEGAIDAANVL 319
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGE+QCIGATTLDEYRK+IEKD AL RRFQ + V ETI+ILKGLRERYE
Sbjct: 320 KPALARGEIQCIGATTLDEYRKYIEKDNALARRFQEIMVEPTGKTETIEILKGLRERYEE 379
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++++TD+A+V+A ++S +YI+ R LPDKAID+IDEAG+RVRLR P + +E+++++
Sbjct: 380 HHRVQFTDDAVVAAVEMSERYITARCLPDKAIDVIDEAGARVRLRTMTRPPDLKEIDEQV 439
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
+ K+K +AV QDFEKA LRD+ L+ + + + +E S+ +T+ VV E
Sbjct: 440 ETLNKDKEDAVANQDFEKAANLRDQAEKLRKKKEQITQEWREKSQ-QTDG-----VVDEE 493
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
I +VS TGIP+ ++ST++S RLLKMEE LHKRV+ Q +AV A+++A+RR+R GLK+P
Sbjct: 494 IIAEVVSKMTGIPLTRLSTEDSLRLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDP 553
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
RP SFIF+GPTGVGK+ LAKALA Y FG +A++ +DMSE+ME+H VS+LIG+PPG+V
Sbjct: 554 KRPTGSFIFAGPTGVGKTLLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFV 613
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTE +RRRPY VVLFDEIEKAHPDVFNM+LQ++E+GRLTDS GR VDF+NT+L
Sbjct: 614 GYEEGGQLTEKIRRRPYAVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTIL 673
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
IMT+N G+ I+ F + D+SY+ +KS V +++++ FRPEFLNRLD+ I+F
Sbjct: 674 IMTTNAGAEAIKNES---AFGFQKPDGDASYDSMKSRVMDQIERVFRPEFLNRLDDTIIF 730
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
R LT ++K + D L +V +RL + + + +++ +E ++++G N YGARPLRRAI +
Sbjct: 731 RHLTTTDLKGVIDFELSKVRERLLDRGLAIDLSDEAKEFLIKKGSNLDYGARPLRRAIEQ 790
Query: 798 LLEDSMAEKMLAREIKEGDSVIVDV--DSDGNVTVLN 832
+ED + E++L + D++I+DV D G +T LN
Sbjct: 791 RIEDPLGEELLRGAFEGKDTIIIDVHKDDSGKITRLN 827
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M+ERFT++A KV+ LA +EA+R H YIG+EH+LLGL++EG GVAA VL+NL D IR
Sbjct: 1 MYERFTDRARKVMQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIR 60
Query: 151 TQVIRMVGESTEAVGAG 167
+V ++V E V G
Sbjct: 61 LEVEKLVQSGPEMVTVG 77
>gi|417304237|ref|ZP_12091266.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|440716927|ref|ZP_20897429.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
gi|327539449|gb|EGF26064.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|436437995|gb|ELP31577.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
Length = 847
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/757 (52%), Positives = 554/757 (73%), Gaps = 31/757 (4%)
Query: 96 TEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR 155
T +A KVI + EEAR L H+Y+G+EH+LLGLLRE EGVAA+VL NLG ++R +V+
Sbjct: 70 TPRAKKVIEYSMEEARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLN 129
Query: 156 MVGESTEAVGAGVGGGSSGN------------------KMPTLEEYGTNLTKLAEEGKLD 197
++G E GA VG K P L+ +G +LT+LA++G+LD
Sbjct: 130 LLGHGLE--GAEVGERGGRGGDGEGSSGGSGSSKSGKSKTPALDSFGRDLTELAKKGELD 187
Query: 198 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVI 257
PV+GR+ +IER +QIL RRTKNNP L+GE GVGKTAI EG AQR+ G+VP+ + K+++
Sbjct: 188 PVIGREREIERAIQILCRRTKNNPVLLGEAGVGKTAIIEGFAQRVVGGEVPEILAEKRIV 247
Query: 258 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANIL 317
LD+ ++VAGTKYRG+FEER+K +M E+++ ILFIDE+HTL+GAG AEGAIDAAN+L
Sbjct: 248 VLDLAMMVAGTKYRGQFEERIKAVMTEVRRVKNTILFIDELHTLVGAGGAEGAIDAANVL 307
Query: 318 KPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEI 377
KP+LARGE+QCIGATTLDEYRK+IEKD AL RRFQ + V ETI+ILKGLRERYE
Sbjct: 308 KPALARGEIQCIGATTLDEYRKYIEKDNALARRFQEIMVEPTGKTETIEILKGLRERYEE 367
Query: 378 HHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL 437
HH++++TD+A+V+A ++S +YI+ R LPDKAID+IDEAG+RVRLR P + +E+++++
Sbjct: 368 HHRVQFTDDAVVAAVEMSERYITARCLPDKAIDVIDEAGARVRLRTMTRPPDLKEIDEQV 427
Query: 438 RQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 497
+ K+K +AV QDFEKA LRD+ L+ + + + +E S+ +T+ VV E
Sbjct: 428 ETLNKDKEDAVANQDFEKAANLRDQAEKLRKKKEQITQEWREKSQ-QTDG-----VVDEE 481
Query: 498 DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 557
I +VS TGIP+ ++ST++S RLLKMEE LHKRV+ Q +AV A+++A+RR+R GLK+P
Sbjct: 482 IIAEVVSKMTGIPLTRLSTEDSLRLLKMEEELHKRVVSQSQAVTAVAKAVRRSRSGLKDP 541
Query: 558 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 617
RP SFIF+GPTGVGK+ LAKALA Y FG +A++ +DMSE+ME+H VS+LIG+PPG+V
Sbjct: 542 KRPTGSFIFAGPTGVGKTLLAKALAEYMFGDADALVHIDMSEYMEKHNVSRLIGAPPGFV 601
Query: 618 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 677
GY EGGQLTE +RRRPY VVLFDEIEKAHPDVFNM+LQ++E+GRLTDS GR VDF+NT+L
Sbjct: 602 GYEEGGQLTEKIRRRPYAVVLFDEIEKAHPDVFNMLLQVMEEGRLTDSFGRNVDFRNTIL 661
Query: 678 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 737
IMT+N G+ I+ F + D+SY+ +KS V +++++ FRPEFLNRLD+ I+F
Sbjct: 662 IMTTNAGAEAIKNES---AFGFQKPDGDASYDSMKSRVMDQIERVFRPEFLNRLDDTIIF 718
Query: 738 RQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMR 797
R LT ++K + D L +V +RL + + + +++ +E ++++G N YGARPLRRAI +
Sbjct: 719 RHLTTTDLKGVIDFELSKVRERLLDRGLAIDLSDEAKEFLIKKGSNLDYGARPLRRAIEQ 778
Query: 798 LLEDSMAEKMLAREIKEGDSVIVDV--DSDGNVTVLN 832
+ED + E++L + D++I+DV D G +T LN
Sbjct: 779 RIEDPLGEELLRGAFEGKDTIIIDVHKDDSGKITRLN 815
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 103 IMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTE 162
+ LA +EA+R H YIG+EH+LLGL++EG GVAA VL+NL D IR +V ++V E
Sbjct: 1 MQLANQEAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKLVQSGPE 60
Query: 163 AVGAG 167
V G
Sbjct: 61 MVTVG 65
>gi|348026597|ref|YP_004766402.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Megasphaera
elsdenii DSM 20460]
gi|341822651|emb|CCC73575.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Megasphaera
elsdenii DSM 20460]
Length = 810
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/731 (52%), Positives = 550/731 (75%), Gaps = 14/731 (1%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
R T + + + LA EA RL NY+G+EH+L G+L EG G+A ++LE++ DP + ++
Sbjct: 79 RLTPRTKRAMELAVREANRLEQNYVGTEHMLAGILEEGSGMAVQILEDMDIDPDLVSQRL 138
Query: 154 IRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQIL 213
++ + G V + + L ++G +L + A++GK+DPV+GR+ +I RV+QIL
Sbjct: 139 SELMNDPAVEGGDAVAAKNGSD----LSQFGRDLNEWAKKGKIDPVIGREKEISRVIQIL 194
Query: 214 GRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGE 273
RRTKNNP LIG PGVGKTAIAEGLAQRI +G+VPD++ K++ +LD+ +VAGTKYRGE
Sbjct: 195 SRRTKNNPVLIGAPGVGKTAIAEGLAQRIINGNVPDSLLDKRIFSLDLASIVAGTKYRGE 254
Query: 274 FEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATT 333
FEER+K++++ I+Q D IILFIDE+H LIGAGA EGA+DAANILKP+LARG+LQCIGATT
Sbjct: 255 FEERIKRILDVIEQDDTIILFIDEIHQLIGAGAVEGAMDAANILKPALARGDLQCIGATT 314
Query: 334 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQ 393
+DEY+KH EKD AL RRFQPV V EP+ D+ + IL GLR+RYE HK R TD+A+ +A +
Sbjct: 315 IDEYKKHFEKDAALARRFQPVLVGEPTEDDAMAILFGLRDRYEAFHKARITDDAVRAAVK 374
Query: 394 LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF 453
LS +YISDR+LPDKAID++DEA +RVR++ E ++LE++L I KEK A+ G+DF
Sbjct: 375 LSARYISDRYLPDKAIDVMDEAAARVRMKVYAPSHELQDLEQKLADINKEKEAALAGEDF 434
Query: 454 EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEK 513
EK LRD + ++ISAL K + + D VVTE DI +VS WTG+PV++
Sbjct: 435 EKCASLRDAGKKVSSEISAL-------QKEKKQHDDEKLVVTENDIADVVSMWTGVPVQQ 487
Query: 514 VSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVG 573
++ ES RLL +EE LHKRVI QD+AV A+++A+RRAR GLK+ NRPI SF+F GP+GVG
Sbjct: 488 ITETESQRLLHLEEELHKRVISQDDAVTAVAKAVRRARAGLKDANRPIGSFLFLGPSGVG 547
Query: 574 KSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRP 633
K+ELA+ LAA FGS + MIR+DMSEFME+++VS+L+G+PPGYVGY EGG+LT+AVR +P
Sbjct: 548 KTELARTLAAQLFGSADNMIRIDMSEFMEKYSVSRLVGAPPGYVGYEEGGELTDAVREKP 607
Query: 634 YTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR 693
Y+V+LFDE+EKA D FN++LQ+L++GRLTDSKGRTVDF+NT++IMTSN+G+S ++ G
Sbjct: 608 YSVILFDEVEKASSDFFNLLLQVLDEGRLTDSKGRTVDFRNTVIIMTSNLGASHLKPSGP 667
Query: 694 RIGFDLDYD---EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 750
+GF D ++++S+ K + ++K++FRPEFLNR+DE+IVF+ L + ++++I D
Sbjct: 668 VMGFSTGGDSAKDREASFEVAKKEIMADVKRFFRPEFLNRIDEIIVFKPLEQKDLRQIVD 727
Query: 751 IMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR 810
I+L+++ RL K + + T + +V+EG + +YGARPL+RAI +L+ED ++E +L+
Sbjct: 728 ILLQDLTKRLGEKGVAMDWTTAADDILVKEGTDFAYGARPLKRAIQKLVEDPISEMLLSG 787
Query: 811 EIKEGDSVIVD 821
++K+G+++ VD
Sbjct: 788 DVKDGNTIHVD 798
>gi|384456448|ref|YP_005669046.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417961014|ref|ZP_12603506.1| ClpC [Candidatus Arthromitus sp. SFB-2]
gi|417963873|ref|ZP_12605726.1| ClpC [Candidatus Arthromitus sp. SFB-3]
gi|417965450|ref|ZP_12606975.1| ClpC [Candidatus Arthromitus sp. SFB-4]
gi|417966566|ref|ZP_12607903.1| ClpC [Candidatus Arthromitus sp. SFB-5]
gi|417968433|ref|ZP_12609454.1| ClpC [Candidatus Arthromitus sp. SFB-co]
gi|418015512|ref|ZP_12655077.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418373339|ref|ZP_12965428.1| ClpC [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|345505847|gb|EGX28141.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|346984794|dbj|BAK80470.1| negative regulator of genetic competence ClpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380331576|gb|EIA22599.1| ClpC [Candidatus Arthromitus sp. SFB-3]
gi|380334540|gb|EIA24925.1| ClpC [Candidatus Arthromitus sp. SFB-2]
gi|380337619|gb|EIA26648.1| ClpC [Candidatus Arthromitus sp. SFB-4]
gi|380339701|gb|EIA28396.1| ClpC [Candidatus Arthromitus sp. SFB-co]
gi|380340944|gb|EIA29477.1| ClpC [Candidatus Arthromitus sp. SFB-5]
gi|380341175|gb|EIA29668.1| ClpC [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 812
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/778 (52%), Positives = 557/778 (71%), Gaps = 16/778 (2%)
Query: 56 NALDTFTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGH 115
N+ D + D + LS G +K T + KVI + +EA++LGH
Sbjct: 49 NSFDVYYDDIFKEIRTILS--------PGEIEIKNSEIPLTPRTKKVIESSIDEAKKLGH 100
Query: 116 NYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN 175
N++ EH+LL ++ E +GVA ++L+ G I Q I + + + N
Sbjct: 101 NHVSPEHILLAIINEPDGVAYKILDKKGVSVVKIWNQTINALNVTIDVQNPHEKEQQLKN 160
Query: 176 -KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 234
P L+++G +LTKLA EGKLDPV+GR + +RV++IL RR KNNPCLIG+PGVGKTAI
Sbjct: 161 LPTPVLDQHGRDLTKLANEGKLDPVIGRDTETQRVLEILCRRIKNNPCLIGDPGVGKTAI 220
Query: 235 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 294
EGLAQ+I G++P+ ++ K+VITLD+ L+AGTKYRGEFEERLKK+MEEIK+S IILF
Sbjct: 221 IEGLAQKIIEGNIPEILKNKRVITLDLSSLIAGTKYRGEFEERLKKIMEEIKRSRNIILF 280
Query: 295 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 354
IDE+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQP+
Sbjct: 281 IDEIHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDTALERRFQPI 340
Query: 355 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 414
V EP+ +ETI IL G+R++YE HHK++ TDEA+ A LS ++I DR+LPDKAIDLIDE
Sbjct: 341 FVGEPNENETIDILIGIRDKYETHHKVKITDEAIKFAVSLSVRFIPDRYLPDKAIDLIDE 400
Query: 415 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 474
A +++R+R+ +P E +E+E+E+ ++ KEK EA+ +DFEKA LRD+E LK ++
Sbjct: 401 ASAKIRVRNLTVPIEVKEIEEEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERL---- 456
Query: 475 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 534
+ KE K + E D ++TE ++ +V++WT IPVEK++ ES++LLK+++ L RVI
Sbjct: 457 ENSKE--KWKVEKYDKEFILTEQELASVVASWTKIPVEKLTQTESEKLLKLDDILRSRVI 514
Query: 535 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 594
Q+EAV +++RA++R RVGLK+P RPI SFIF GPTGVGK+EL KALA FGSE+ +IR
Sbjct: 515 DQNEAVISVARAVKRGRVGLKDPKRPIGSFIFLGPTGVGKTELCKALADAVFGSEDNIIR 574
Query: 595 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 654
DMSEFME+HTVSK+IGSPPGYVG+ EGGQLTE VRR PY+++LFDEIEKAHPD+FN+ML
Sbjct: 575 FDMSEFMEKHTVSKIIGSPPGYVGFQEGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIML 634
Query: 655 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 714
QILEDG LTDS G+ + FKNT++I+TSN+G+++I K +GF + + YN+IK
Sbjct: 635 QILEDGHLTDSNGKKISFKNTIIILTSNIGANIINKDS-SLGFVNHKNGDEEVYNKIKDN 693
Query: 715 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 774
V ELK+ FRPEFLNRLD++IVF+ L K + +I D ML + R+ ++I + + +
Sbjct: 694 VLSELKKSFRPEFLNRLDDIIVFKPLDKKSLVKILDKMLDDFKSRVLNQNIIINFNDDVK 753
Query: 775 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 832
++E + YGARPLRR+I + +EDS+++++L IK DSV V + D + N
Sbjct: 754 NYILENSSSEKYGARPLRRSITKYIEDSLSDQILLGNIKANDSVEVILKDDKICYIKN 811
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE+ TE+A KVI + ++A +LGH +IG+EH+LLGLLRE +G A ++L +
Sbjct: 1 MFEKLTERARKVISYSGDDALKLGHGFIGTEHILLGLLRE-DGPAQKILNSF 51
>gi|182420087|ref|ZP_02951321.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237666342|ref|ZP_04526327.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376124|gb|EDT73711.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237657541|gb|EEP55096.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
Length = 814
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/715 (54%), Positives = 545/715 (76%), Gaps = 11/715 (1%)
Query: 109 EARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR---TQVIRMVGESTEAVG 165
EA++L H ++G EH+LL L+ + EG+A +L++L + NI+ TQ + +AV
Sbjct: 95 EAKKLDHRFVGPEHILLALVAQEEGMAYTILKSLKLNFDNIKEELTQFLSGGNYEDKAVD 154
Query: 166 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 225
+ K P L++YG +LT+LA+EG LDPV+GR + +RV++IL RR KNNPCLIG
Sbjct: 155 NESEHNTKKEKTPMLDKYGRDLTQLAQEGALDPVIGRDIENQRVLEILCRRIKNNPCLIG 214
Query: 226 EPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 285
EPGVGKTA+ EGLAQRI G+VP+ ++ K+VI+LD+ ++AG KYRGEFEERLKK M+EI
Sbjct: 215 EPGVGKTAVIEGLAQRIIDGNVPEILKNKRVISLDLTSMIAGAKYRGEFEERLKKTMDEI 274
Query: 286 KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDP 345
++ +I+FIDE+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD
Sbjct: 275 RKDKSVIIFIDEIHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDS 334
Query: 346 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP 405
ALERRFQPV V EPS ++T++ILKGLR++YE HH+++ TDEALV+A LS +YI+DRF+P
Sbjct: 335 ALERRFQPVTVEEPSKEDTLEILKGLRDKYEAHHRVKITDEALVAAVNLSDRYITDRFMP 394
Query: 406 DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD 465
DKAIDLIDE ++VR+ P E +E+E+ + I KEK +A+ QDFEKA LRD E +
Sbjct: 395 DKAIDLIDEGAAKVRIESLTEPPELKEIEERIALIDKEKEDAIMIQDFEKAANLRDNEKE 454
Query: 466 LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKM 525
LK + L +K KE + ++ +V + I ++VS WT IP+EK++ ES++LL +
Sbjct: 455 LKTE---LENKKKEWN---AQSSSKLLIVDKEKIANVVSVWTNIPIEKLTESESEKLLHL 508
Query: 526 EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY 585
E+ LHKRVIGQ+EAVK+I+RA+RRARVG+K+PNRPI SFIF GPTGVGK+EL+KALA
Sbjct: 509 EDILHKRVIGQNEAVKSIARAVRRARVGIKDPNRPIGSFIFLGPTGVGKTELSKALAEAM 568
Query: 586 FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA 645
FG E ++IR+DMSE+ME H+V+KLIG+PPGY+G+ +GGQLTEAVRR+PY++VL DEIEKA
Sbjct: 569 FGDENSIIRVDMSEYMESHSVAKLIGAPPGYIGHEDGGQLTEAVRRKPYSIVLLDEIEKA 628
Query: 646 HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 705
H D+FN++LQI+EDGRLTD KG+ V+FKNT++IMTSNVG+ I+K + IGF+ +E +
Sbjct: 629 HQDIFNILLQIMEDGRLTDGKGKVVNFKNTIIIMTSNVGAHQIKK-QKTIGFNSAQNE-E 686
Query: 706 SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 765
S Y ++K + ELK+ F+PEFLNR+D+ IVF +L ++ +I D+MLK + DRL+ ++I
Sbjct: 687 SDYEKMKENILGELKKQFKPEFLNRIDDTIVFHKLNDQDLDKIMDLMLKSIKDRLEHREI 746
Query: 766 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIV 820
L + +E ++ +G + GARPLRR +++ +ED ++E++L I+ GD V V
Sbjct: 747 YLNFEDNSKEFLLNKGIDLENGARPLRRILIKEVEDRLSEEILQGNIQIGDKVKV 801
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
+ + TE+A VI+ A+ E+ + H Y+G+EH+LLG+L+E G +A +L+ G NIR
Sbjct: 3 YSKLTERAQVVILEAEGESEKFKHGYVGTEHILLGILKEN-GYSATLLKKHGIYLENIRE 61
Query: 152 QVIRMVG 158
+ R +G
Sbjct: 62 MLQRYLG 68
>gi|315605228|ref|ZP_07880274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
gi|315313045|gb|EFU61116.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
Length = 826
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/741 (57%), Positives = 565/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 84 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 143
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 144 QMLSGYQRGDEEGRESVGAGVGGTGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRTE 203
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I +GDVP+TI+ +++ +LDMG LV
Sbjct: 204 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGDVPETIKDRQIYSLDMGSLV 263
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 264 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 323
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSVDET++ILKGLR+RYE HH++ TD
Sbjct: 324 LQTIGATTNDEYRKYIEKDAALERRFQPVKVDEPSVDETVEILKGLRDRYEAHHRVIITD 383
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+R+R P E REL++++ ++ + K
Sbjct: 384 AAIQAAAELADRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEKIAEVRRNKE 443
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD E L + K KE + E+ ++ V + +I +++
Sbjct: 444 AAIDDQDFEKAASLRDEESKLAEE-----RKSKEEAWKGGESDEIAE-VGDQEIAEVLAM 497
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LLKME+ LHKRVIGQDEAVKA++++IRR R GLK+PNRP SFI
Sbjct: 498 STGIPVVRLTQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGSFI 557
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 558 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 617
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 618 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 677
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D Y R+K+ V EELKQ+FRPEFLNR+D+ IVF LTK E+
Sbjct: 678 RDINK-GVLTGFQT-ADHSTHDYGRMKAKVAEELKQHFRPEFLNRVDDTIVFPPLTKPEI 735
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
I D+M+ ++ R++ +D+ LQ+T+ RE + + G++P GARPLRRAI R +ED+++E
Sbjct: 736 ARIVDLMIAKLAKRMEAQDMRLQLTDEARELLADVGFDPVLGARPLRRAIQREIEDALSE 795
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
++L E++ G V V V +G
Sbjct: 796 RILFGELQPGQVVTVGVQEEG 816
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 89 KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
+ MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE +
Sbjct: 3 RGMFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLISEGEGVAAKALETMEIKGEA 62
Query: 149 IRTQVIRMVGESTEAV 164
+R VI ++GE + V
Sbjct: 63 VRASVIEIIGEGEKPV 78
>gi|160931710|ref|ZP_02079104.1| hypothetical protein CLOLEP_00542 [Clostridium leptum DSM 753]
gi|156869355|gb|EDO62727.1| ATPase family associated with various cellular activities (AAA)
[Clostridium leptum DSM 753]
Length = 820
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/732 (54%), Positives = 555/732 (75%), Gaps = 10/732 (1%)
Query: 93 ERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQ 152
E FT + +++ +A +A R+G Y+G+EHLLL +L E + A R L +G S I +
Sbjct: 80 EDFTPRTKRILQIAVMQAARMGFTYVGTEHLLLAILGESDSYAVRFLAEMGVRSSEIVEK 139
Query: 153 VIRMVGESTEAVGAGVGGGSSG---NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV 209
+ ++G T++ + G + TL+++G +LT+ A +G++DPV+GRQ +IERV
Sbjct: 140 MNELMGAETDSSASVPKQGKESKIKSATKTLDQFGRDLTEQARKGEIDPVIGRQMEIERV 199
Query: 210 VQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTK 269
VQIL RRTKNNPCLIGEPGVGKTA+AEGLA +I SG+VP+ ++ K++++LD+ ++AGTK
Sbjct: 200 VQILSRRTKNNPCLIGEPGVGKTAVAEGLALQIVSGNVPELLKDKRLVSLDLTGMIAGTK 259
Query: 270 YRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCI 329
YRG+FE+R+K +EE+K++ +ILFIDE+HT+IGAGAAEG+ DAANILKP+LARG+ Q I
Sbjct: 260 YRGDFEDRIKNAIEEVKKAGNVILFIDELHTIIGAGAAEGSADAANILKPALARGDFQVI 319
Query: 330 GATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALV 389
GATT+DEYRKHIEKD ALERRFQPV V EP+V E ILKGLR+RYE HHK++ TDEA+
Sbjct: 320 GATTIDEYRKHIEKDAALERRFQPVMVGEPTVQEAAAILKGLRDRYEAHHKVKITDEAIE 379
Query: 390 SAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR 449
+A +LS +YISDR+LPDKAIDLIDEA SRVRLR +P++ ++LE++ +++ +EK AV
Sbjct: 380 AAVELSSRYISDRYLPDKAIDLIDEAASRVRLRCYTVPDDLQQLEEKSKELEQEKAAAVN 439
Query: 450 GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGI 509
QDFE+A LRD LK Q+ ++ ++ ++ G VT DI IVS+WTG+
Sbjct: 440 SQDFERAASLRDEVRHLKQQLEEQRNQWRDKNERS------GDEVTAKDIAQIVSSWTGV 493
Query: 510 PVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGP 569
PV +++ +ES RLL++EE LH+R++GQ EAV A++RAIRR RVGLK+P RPI SF+F GP
Sbjct: 494 PVVQLTEEESQRLLRLEEILHQRIVGQKEAVAAVARAIRRGRVGLKDPKRPIGSFLFLGP 553
Query: 570 TGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAV 629
TGVGK+EL KALA FG E+AMIR+DMSE+ME+HTVS++IGSPPGYVGY EGGQLTE +
Sbjct: 554 TGVGKTELCKALAQAMFGDEKAMIRMDMSEYMEKHTVSRMIGSPPGYVGYQEGGQLTEKI 613
Query: 630 RRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIE 689
RR+PY+VVLFDEIEKAHPDVF+++LQILEDG+LTDS+GRTVDFKN ++IMTSN+G+ +I
Sbjct: 614 RRKPYSVVLFDEIEKAHPDVFHLLLQILEDGQLTDSQGRTVDFKNAVVIMTSNIGARLIT 673
Query: 690 KGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIA 749
+ +GF D + +++ ++ V EELK+ FRPEFLNR+D++IVF++LT+ E+++IA
Sbjct: 674 ENRLNLGFSAD-NSQEADQKVMRDKVMEELKKAFRPEFLNRIDDIIVFQKLTQEEIQQIA 732
Query: 750 DIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLA 809
ML ++ RL+ + L+ TE + + G++P YGARPLRR I +ED ++E++LA
Sbjct: 733 VHMLNDLKARLEPLGVSLEFTEEAVRTIAKAGFDPVYGARPLRREIQTKVEDPLSEELLA 792
Query: 810 REIKEGDSVIVD 821
++K G + + D
Sbjct: 793 GDLKAGGTAVCD 804
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F FT+KA + LA + A +GH Y+GSEH+LLGLL+EG GVAA VL + D S +
Sbjct: 4 FNGFTQKANHAMNLAIQCAEEMGHTYVGSEHILLGLLKEGSGVAAAVLRAVEVDASQLEL 63
Query: 152 QVIRMVG 158
+ + +G
Sbjct: 64 LMTQKIG 70
>gi|226226990|ref|YP_002761096.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gemmatimonas
aurantiaca T-27]
gi|226090181|dbj|BAH38626.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gemmatimonas
aurantiaca T-27]
Length = 835
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/783 (52%), Positives = 558/783 (71%), Gaps = 38/783 (4%)
Query: 58 LDTFTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGHNY 117
LD T TV ++GK+ +A G + +T +A KV+ LA EAR L H+Y
Sbjct: 57 LDDVTLKIEETV------KKGKAAQATGPDLP-----YTSRAKKVLELAMAEARDLNHSY 105
Query: 118 IGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVG-------ESTEAVGAGV-- 168
+G+EHLLLGLLRE +G+AA+VL + G + R + +R++G E +A AG
Sbjct: 106 VGTEHLLLGLLREEKGIAAQVLTDAGVNLEAARAETLRLLGTEMPQTGEKPQAEKAGTVP 165
Query: 169 -----GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL 223
G +K P L+ + +LT+LA EG+LDP +GR +IERV+++L RR KNNP L
Sbjct: 166 PAAAPAKGDKKSKTPALDHFCRDLTQLAAEGQLDPTIGRAKEIERVMEVLSRRKKNNPVL 225
Query: 224 IGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 283
IGEPGVGKTAI EGLAQ I++ D PD++ +V++LDM ++AGTKYRG+FEERLK +M
Sbjct: 226 IGEPGVGKTAIVEGLAQLISANDCPDSLRDHRVLSLDMAAVIAGTKYRGQFEERLKAVMN 285
Query: 284 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEK 343
EI Q+ +IILFIDE+HTL+GAGAAEGAIDA+N+LKP+LARGELQC+GA+TL+EYRK+IEK
Sbjct: 286 EIAQNKQIILFIDELHTLVGAGAAEGAIDASNMLKPALARGELQCVGASTLNEYRKYIEK 345
Query: 344 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRF 403
D ALERRFQ V V PS+DET+QIL+GL+++YE HH++ D L++AA+LS +YI+DRF
Sbjct: 346 DGALERRFQTVVVEPPSIDETVQILQGLKKKYEDHHRVNIPDATLLAAAKLSERYITDRF 405
Query: 404 LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE 463
LPDKAID+IDEAG+R RL P E +L+++L +I EK AVR Q+FE+A LRD E
Sbjct: 406 LPDKAIDVIDEAGARARLAAQVPPAEVADLKEQLEKINTEKEAAVRDQNFERAASLRDNE 465
Query: 464 MDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLL 523
+L+A+I ++ + E P + E +I IVS WTGIPV ++ E+ RLL
Sbjct: 466 RELQAEIR------RKQEEWEQRRQSFRPTLGEEEIAFIVSRWTGIPVTRLQEAETSRLL 519
Query: 524 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA 583
+ME+ LH V+GQDEA+KA++R+IRR+R GLK+P RPI SFIFSGPTGVGK+ELA+ALA
Sbjct: 520 RMEDELHGTVVGQDEAIKALARSIRRSRAGLKDPRRPIGSFIFSGPTGVGKTELARALAK 579
Query: 584 YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE 643
+ F A+IR+DMSE+ME+ +VS+LIG+PPGYVGY + G LT+AVRR+PY+VVL DEIE
Sbjct: 580 FLFADTSALIRVDMSEYMEKFSVSRLIGAPPGYVGYEDSGTLTKAVRRKPYSVVLLDEIE 639
Query: 644 KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE 703
KAHPDVFN++LQ+L++G LTD+ GR +DFKNT++IMTSNVG+ I K G+ +GF
Sbjct: 640 KAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVVIMTSNVGAKDITK-GKSLGFAT---- 694
Query: 704 KDS--SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLK 761
KDS + RI V EE+ + F PEFLNRLD++IVF L K + +I I+ +V RL
Sbjct: 695 KDSRGDFERIAEKVKEEMGRVFNPEFLNRLDDVIVFHPLGKEHIGQIVSILFGDVQKRLA 754
Query: 762 TKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 821
+++ +++T E +V+ G++ +GARPL+RAI R +ED ++EK+L E GD + V
Sbjct: 755 EEELTIKLTPEATEFLVDHGHDEHFGARPLKRAIQRYVEDPLSEKILTGEYSRGDEIEVG 814
Query: 822 VDS 824
V +
Sbjct: 815 VST 817
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FTE+ KV+ +A+EEA RL H Y+G+EH+LLGL+REGEGVAA VL+NL D ++ ++
Sbjct: 6 FTERVRKVLAMAREEAARLHHEYVGTEHILLGLIREGEGVAAAVLQNLNVDLDDVTLKIE 65
Query: 155 RMV--GESTEAVGAGVGGGSSGNKM 177
V G++ +A G + S K+
Sbjct: 66 ETVKKGKAAQATGPDLPYTSRAKKV 90
>gi|399525068|ref|ZP_10765545.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
gi|398373543|gb|EJN51465.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
Length = 822
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/742 (57%), Positives = 564/742 (76%), Gaps = 17/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 80 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 139
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 140 QMLSGYQRGDEEGRESVGAGVGGSGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRVE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ +LDMG LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDKQIYSLDMGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRKHIEKD ALERRFQPVKV EPSV+ET++ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTNDEYRKHIEKDAALERRFQPVKVEEPSVEETVEILKGLRDRYEAHHRVIITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+R+R P E REL++++ ++ + K
Sbjct: 380 AAIQAAAELADRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEKIAEVRRNKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD E L + K KE + E+ ++ V + +I +++
Sbjct: 440 AAIDDQDFEKAASLRDEESKLSDE-----RKAKEEAWKGGESDEIAE-VGDQEIAEVLAM 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LLKME+ LHKRVIGQDEAVKA++++IRR R GLK+PNRP SFI
Sbjct: 494 STGIPVVRLTQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 554 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D Y R+K+ V EELKQ+FRPEFLNR+D+ IVF LTK E+
Sbjct: 674 RDINK-GVLTGFQT-ADNSTHDYGRMKAKVAEELKQHFRPEFLNRVDDTIVFPPLTKPEI 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
I D+M+ ++ R++ +D+ LQ+T+ RE + + G++P GARPLRRAI R +ED+++E
Sbjct: 732 ARIVDLMIAKLAKRMEAQDMRLQLTDEARELLADVGFDPVLGARPLRRAIQREIEDALSE 791
Query: 806 KMLAREIKEGDSVIVDVDSDGN 827
++L E++ G V V V +G
Sbjct: 792 RILFGELQSGQVVTVGVTGEGK 813
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLISEGEGVAAKALETMGIKGEAVR 60
Query: 151 TQVIRMVGESTEAV 164
VI ++GE + V
Sbjct: 61 ASVIEIIGEGEKPV 74
>gi|256827723|ref|YP_003151682.1| ATPase with chaperone activity, ATP-binding subunit
[Cryptobacterium curtum DSM 15641]
gi|256583866|gb|ACU95000.1| ATPase with chaperone activity, ATP-binding subunit
[Cryptobacterium curtum DSM 15641]
Length = 862
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/794 (52%), Positives = 563/794 (70%), Gaps = 35/794 (4%)
Query: 55 SNALDTFTCDFHSTV-----AVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEE 109
+ ALD + TV V++ SG G FT + +V+ + E
Sbjct: 47 AQALDRLNVTYDETVQTIRQVVAIDPDTDVSGHLG----------FTSRVKRVLENSLRE 96
Query: 110 ARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVG 169
A ++G +YI +EHLLLG++REGEGVA VL +G +R + +VG+S G
Sbjct: 97 AMQMGQSYISTEHLLLGIIREGEGVAIDVLARMGVTGDAVRGALNDLVGQSAVFAGRINP 156
Query: 170 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGV 229
S L+EYGT+LTK A +GKLDPV+GR +IER++QIL RR KNNP LIGEPGV
Sbjct: 157 DVQSTPSESALKEYGTDLTKKAFDGKLDPVIGRAGEIERIMQILCRRQKNNPLLIGEPGV 216
Query: 230 GKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 289
GKTA+ EGLAQ I S VPD + +++ TLD+ LVAG+KYRGEFEERLKK + E+ +
Sbjct: 217 GKTAVVEGLAQLIVSNQVPDILRNRRLFTLDISSLVAGSKYRGEFEERLKKCIREVVNAG 276
Query: 290 EIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALER 349
+IILFIDE+HTLIGAGAAEG+IDAA+ILKP L+RGE+Q IGATT+DEYRKHIEKD ALER
Sbjct: 277 DIILFIDELHTLIGAGAAEGSIDAASILKPPLSRGEIQVIGATTIDEYRKHIEKDSALER 336
Query: 350 RFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAI 409
RFQP+ V EP+ +++++I++GLR+RYE HH++ ++DEAL +A LS +YI DRFLPDKAI
Sbjct: 337 RFQPITVGEPNEEQSVRIMQGLRDRYEEHHQVHFSDEALQAAVTLSNRYIQDRFLPDKAI 396
Query: 410 DLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQ 469
D++DEAG+R+R+R+ LP E R++++ELR++ +K A+ QDFE+A LRD+E L+
Sbjct: 397 DVLDEAGARMRIRNMTLPPELRDIDEELREMRMKKEAAIANQDFEEAATLRDQEDQLR-- 454
Query: 470 ISALVDKGKEMSKAETEAG--DVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEE 527
DK E K+ E+ DV V E DI +VS TG+PV ++ E+D+LL+ME
Sbjct: 455 -----DKRAEAQKSWEESSRKDVQNVSAE-DIADVVSMTTGVPVSDLTEAEADKLLRMES 508
Query: 528 TLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFG 587
LH+R+IGQDEAV A+S+AIRRAR GL +P RP SFIF GP+GVGK+EL+KALA + F
Sbjct: 509 VLHERIIGQDEAVTAVSKAIRRARSGLADPKRPTGSFIFLGPSGVGKTELSKALAEFLFN 568
Query: 588 SEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHP 647
SE+A++ DMSE+ME+HTVS+LIGSPPGYVGY EGGQLT+AVR+RPY+VVLFDEIEKAHP
Sbjct: 569 SEDALVSFDMSEYMEKHTVSRLIGSPPGYVGYDEGGQLTKAVRQRPYSVVLFDEIEKAHP 628
Query: 648 DVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS- 706
DVFN++L+ILE+GRLTD +GR VDF+NT++IMTSNVG+ I + + +GF E S
Sbjct: 629 DVFNILLEILEEGRLTDGQGRVVDFRNTVIIMTSNVGARDIAQ-TQTLGF----GEGGSG 683
Query: 707 -SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDI 765
S IKS VT ELK+ FRPEFLNR+DE IVF+ LTK E+ +I +M+ ++ +RL +++
Sbjct: 684 LSDKEIKSRVTSELKKLFRPEFLNRIDETIVFKSLTKDEIGQIVKLMVADLRERLIAQNM 743
Query: 766 ELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD-S 824
+ +T+ + EG + ++GARPLRRAI RLLED +++++L G ++DVD
Sbjct: 744 TINITDEACRYIASEGTDVTFGARPLRRAIQRLLEDPISDQVLEGRWTSGS--VIDVDFE 801
Query: 825 DGNVTVLNGSSGAP 838
DG + G+ P
Sbjct: 802 DGKLVFKEGTGSIP 815
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++FT+KA KV+++AQ+EAR L Y+G+EH+LL L++E +G+AA+ L+ L
Sbjct: 3 FDKFTDKARKVLVIAQDEARTLHQPYVGTEHILLALIKEKDGLAAQALDRLNVTYDET-V 61
Query: 152 QVIRMV 157
Q IR V
Sbjct: 62 QTIRQV 67
>gi|147668703|ref|YP_001213521.1| ATPase [Dehalococcoides sp. BAV1]
gi|146269651|gb|ABQ16643.1| ATPase AAA-2 domain protein [Dehalococcoides sp. BAV1]
Length = 824
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/734 (56%), Positives = 553/734 (75%), Gaps = 12/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
T +A KVI L +EAR LGHNYIG+EHLLLGLLREGEG AA VLE+ G +RT+V
Sbjct: 83 LTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGEGAAAGVLESFGVTVEKVRTEVG 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILG 214
R++ + A ++ ++ P L++ G +LT A+ GKLDPV+GR +IERVVQIL
Sbjct: 143 RILNQGLNKPKAS---RTTPSRTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILS 199
Query: 215 RRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEF 274
RRTKNNP LIGEPGVGKT+I EGLAQRI SGDVP+T+E K +I+LD+ LVAGTKYRGEF
Sbjct: 200 RRTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKHIISLDVASLVAGTKYRGEF 259
Query: 275 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTL 334
EERLKK++EEIK + IILFIDE HT++GAGAAEGA+DAANILKPSLARGE+Q IGATTL
Sbjct: 260 EERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTL 319
Query: 335 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQL 394
D++RK++E+D ALERRFQPV V EP++++T+ IL+G++ERYE HHKL +DEA+++AA +
Sbjct: 320 DDFRKYVERDAALERRFQPVLVEEPAIEDTLSILRGIKERYEEHHKLIISDEAIIAAANM 379
Query: 395 SYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE 454
+ +YI DRFLPDKAIDL+DEA SRVR++ P +E++ ++K A+ Q ++
Sbjct: 380 AARYIPDRFLPDKAIDLVDEAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYD 439
Query: 455 KAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKV 514
A ELR+RE+ + +I + D+ +TE PVV E DI +VS WTG+P+ ++
Sbjct: 440 YASELRERELQIAEKIRRMEDEW------QTEQAMDKPVVGEEDIAQVVSMWTGVPLVQL 493
Query: 515 STDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 574
+ DE++RLL ME+ LH+R+IGQ+EA+ IS+A+RRAR GLK+P PI +F+F GPTGVGK
Sbjct: 494 TGDETERLLHMEDALHERIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGK 553
Query: 575 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 634
+ELA+ALA + FGSE++++RLDMSEFME+ VS+L+G+PPGYVGY EGGQLTEAVRR+ Y
Sbjct: 554 TELARALAQFMFGSEDSLVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSY 613
Query: 635 TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRR 694
++L DEIEKAHPDVFN++LQI +DG LTD+KGR VDF+NT++IMTSN+G+ +I KG
Sbjct: 614 CLILLDEIEKAHPDVFNILLQIFDDGHLTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGT 673
Query: 695 IGFDLDYDE---KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
IGF DE + +++ +K + ELK+ FRPEFLNR+D ++VF L K +++ I D+
Sbjct: 674 IGFATQTDESKAQQTNFEHMKDKLLGELKKSFRPEFLNRIDSVVVFHSLNKEQIRSIVDL 733
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
MLK V ++ K I L+VTE ++ + ++GY+ YGARPLRR I ++ED ++E +L +
Sbjct: 734 MLKSVVKQMAEKGIGLEVTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAK 793
Query: 812 IKEGDSVIVDVDSD 825
K GD VIVD D
Sbjct: 794 FKAGDKVIVDTAED 807
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
F++F+E+A +V+ AQEEA+ L HNYIG+EH+LLGL+RE EGVAARVL N+ + + +R+
Sbjct: 5 FDKFSERARRVLTYAQEEAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMDVNLAKVRS 64
Query: 152 QVIRMVGESTEAVGAGVGGGSSGNKMPTL 180
V ++G + G S K+ L
Sbjct: 65 AVEFILGRGEHPATSETGLTSRAKKVIEL 93
>gi|154508516|ref|ZP_02044158.1| hypothetical protein ACTODO_01017 [Actinomyces odontolyticus ATCC
17982]
gi|153798150|gb|EDN80570.1| ATPase family associated with various cellular activities (AAA)
[Actinomyces odontolyticus ATCC 17982]
Length = 826
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/741 (57%), Positives = 564/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 84 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 143
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 144 QMLSGYQRGDDEGRESVGAGVGGSGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRVE 203
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ +LDMG LV
Sbjct: 204 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDKQIYSLDMGSLV 263
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 264 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 323
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSVDET++ILKGLR+RYE HH++ TD
Sbjct: 324 LQTIGATTNDEYRKYIEKDAALERRFQPVKVEEPSVDETVEILKGLRDRYEAHHRVIITD 383
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+R+R P E RE+++++ ++ + K
Sbjct: 384 AAIQAAAELADRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELREIDEKIAEVRRNKE 443
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD E L + K KE + E+ ++ V + +I +++
Sbjct: 444 AAIDDQDFEKAASLRDEESKLNEE-----RKAKEEAWKGGESDEIAE-VGDQEIAEVLAM 497
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LLKME+ LHKRVIGQDEAVKA++++IRR R GLK+PNRP SFI
Sbjct: 498 STGIPVVRLTQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGSFI 557
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 558 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 617
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 618 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 677
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D Y R+KS V EELKQ+FRPEFLNR+D+ IVF LTK E+
Sbjct: 678 RDINK-GVLTGFQT-ADNSTHDYGRMKSKVAEELKQHFRPEFLNRVDDTIVFPPLTKPEI 735
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
I D+M+ ++ R++ +D+ LQ+T+ RE + + G++P GARPLRRAI R +ED+++E
Sbjct: 736 SRIVDLMIAKLAKRMEAQDMRLQLTDEARELLADVGFDPVLGARPLRRAIQREIEDALSE 795
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
++L E++ G V V V +G
Sbjct: 796 RILFGELQPGQVVTVGVTGEG 816
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 89 KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
+ MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE +
Sbjct: 3 RGMFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLISEGEGVAAKALETMEIKGEA 62
Query: 149 IRTQVIRMVGESTEAV 164
+R VI ++GE + V
Sbjct: 63 VRASVIEIIGEGEKPV 78
>gi|396583892|ref|ZP_10484401.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
gi|395548567|gb|EJG15807.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
Length = 822
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/742 (57%), Positives = 565/742 (76%), Gaps = 17/742 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 80 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 139
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 140 QMLSGYQRGDDEGRESVGAGVGGSGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRVE 199
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ +LDMG LV
Sbjct: 200 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDKQIYSLDMGSLV 259
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 260 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 319
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSV+ET++ILKGLR+RYE HH++ TD
Sbjct: 320 LQTIGATTNDEYRKYIEKDAALERRFQPVKVEEPSVEETVEILKGLRDRYEAHHRVIITD 379
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+R+R P E REL++++ ++ + K
Sbjct: 380 AAIQAAAELADRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELRELDEKIAEVRRNKE 439
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD+E L + K KE + E+ ++ V + +I +++
Sbjct: 440 AAIDDQDFEKAASLRDQESKLSEE-----RKAKEEAWKGGESDEIAE-VGDQEIAEVLAM 493
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LLKME+ LHKRVIGQDEAVKA++++IRR R GLK+PNRP SFI
Sbjct: 494 STGIPVVRLTQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGSFI 553
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 554 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 613
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 614 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 673
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D Y R+KS V EELKQ+FRPEFLNR+D+ IVF LTK E+
Sbjct: 674 RDINK-GVLTGFQT-ADHSTHDYGRMKSKVAEELKQHFRPEFLNRVDDTIVFPPLTKPEI 731
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
I D+M+ ++ R++ +D+ LQ+T+ RE + + G++P GARPLRRAI R +ED+++E
Sbjct: 732 ARIVDLMIAKLAKRMEAQDMRLQLTDEARELLADVGFDPVLGARPLRRAIQREIEDALSE 791
Query: 806 KMLAREIKEGDSVIVDVDSDGN 827
++L E++ G V V V +G
Sbjct: 792 RILFGELQPGQVVTVGVTGEGK 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE +G +R
Sbjct: 1 MFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLISEGEGVAAKALETMGIKGEAVR 60
Query: 151 TQVIRMVGESTEAV 164
VI ++GE + V
Sbjct: 61 ASVIEIIGEGEKPV 74
>gi|328956590|ref|YP_004373976.1| class III stress response-like ATPase, AAA+ superfamily
[Carnobacterium sp. 17-4]
gi|328672914|gb|AEB28960.1| class III stress response-like ATPase, AAA+ superfamily
[Carnobacterium sp. 17-4]
Length = 830
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/729 (53%), Positives = 542/729 (74%), Gaps = 12/729 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
++ +A + I A +EARR+G +G+EHLLLGLLRE + +++++L NL + + R V+
Sbjct: 83 YSPRAKQAITFATDEARRMGSALVGTEHLLLGLLREEDILSSKILNNLDINLNKARQIVL 142
Query: 155 RMVGESTEAVGAGVGGGSSGNKM---PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+ +G S G G + ++ PTL+ +LT +A EGKLDPVVGR +I+R++Q
Sbjct: 143 KKIGLSDVTNGKGRKAKPAAKQVAGTPTLDSLARDLTAVAREGKLDPVVGRHKEIQRIIQ 202
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RRTKNNP L+GEPGVGKTAIAEGLAQ+I G+VP + K+++ LDMG LVAGTKYR
Sbjct: 203 VLSRRTKNNPVLVGEPGVGKTAIAEGLAQKIIDGEVPAALANKRLMMLDMGSLVAGTKYR 262
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEER+KK+++EI Q E++LFIDE+HTLIGAG AEGAIDA+NILKP+LARGELQ IGA
Sbjct: 263 GEFEERMKKVIDEIYQDGEVVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIGA 322
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TTLDEY+K+IEKD ALERRF P+ V PS +E +IL GLR RYE HH + TDEA+ +A
Sbjct: 323 TTLDEYQKYIEKDAALERRFAPIHVDAPSEEEAEEILLGLRSRYEEHHGVEITDEAVHAA 382
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+ S +YI R LPDKAIDLIDE+ S+VRL + P +L + +EK EA++ Q
Sbjct: 383 VKYSSRYIMSRQLPDKAIDLIDESASKVRLDVSSKPSPVAAAVTDLEGLIQEKEEAIQLQ 442
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
DFEKA ++R +EM + +I +L+ K E +A VTE DI +V+ WTGIP+
Sbjct: 443 DFEKAAKIRSKEMKQRKKIESLI------QKQEGKAASNSLQVTERDIAEVVALWTGIPI 496
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
+++ ESDRL+ +E+ LHKRVIGQ++AV ++SRAIRR+R GLK+PNRPI SF+F GPTG
Sbjct: 497 QQMEQKESDRLMNLEKVLHKRVIGQEKAVGSVSRAIRRSRSGLKDPNRPIGSFMFLGPTG 556
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+ELAKALA FG+EEA++R+DMSEFME+++ S+LIGSPPGYVGY EGGQLTE +R+
Sbjct: 557 VGKTELAKALAEAMFGNEEALVRVDMSEFMEKYSTSRLIGSPPGYVGYDEGGQLTEKIRQ 616
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
+PY+V+LFDE+EKAHPDVFN++LQ+L+DG LTD+KGR VDFKNT++IMTSN+G++ + +
Sbjct: 617 KPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFKNTVMIMTSNLGATAL-RD 675
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+ +GF ++KD S ++ + EELK+ F+PEF+NR+D+ IVF L K E+ +I +
Sbjct: 676 EKAVGFGTANNKKDHSA--MEKRIMEELKKTFKPEFINRIDDSIVFHSLEKEELTQIVKL 733
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M + RLK DIE+++T+ + + + GY+P YGARP+RRA+ + +ED ++E++L+
Sbjct: 734 MAHTIIKRLKDMDIEVKITQAAIDVIAKAGYDPEYGARPIRRALQKEVEDRLSEELLSGR 793
Query: 812 IKEGDSVIV 820
+K GD + +
Sbjct: 794 VKIGDQITI 802
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIR 150
M E F+EKA V+++AQEEA+ H+ +G+EH+LLGL+ E +G+A + L +IR
Sbjct: 1 MDELFSEKARMVLIMAQEEAKGFRHHSVGTEHILLGLIMEQDGIAGKTLRQFSVTEMDIR 60
Query: 151 TQVIRMVGEST 161
++ G T
Sbjct: 61 EEIEHFTGYGT 71
>gi|373106264|ref|ZP_09520567.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
gi|371652639|gb|EHO18047.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
Length = 839
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/735 (53%), Positives = 556/735 (75%), Gaps = 17/735 (2%)
Query: 94 RFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQV 153
++T + +V+ ++ A R +G+EH+LL +L+E VA+++L +G + + +
Sbjct: 80 KYTPMSRRVLEYSKAAAERFQAPQVGTEHILLAILKEKNCVASKLLYTMGVNIQKLYVDL 139
Query: 154 IRMVGES-------TEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQI 206
+ +GE + G+GV GS+ PTL++Y +LT+ A +GKLDPV+GR ++
Sbjct: 140 MHAMGEKHSPEDMPQQTQGSGVVSGSA-QPTPTLDQYSRDLTEFARQGKLDPVIGRSVEM 198
Query: 207 ERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVA 266
+RV+QIL RRTKNNPCLIGEPGVGKTA+ EGLAQ I SG+VP+T+ K+++TLD+ ++A
Sbjct: 199 QRVMQILSRRTKNNPCLIGEPGVGKTAVVEGLAQLIVSGEVPETLADKRLVTLDLSGMIA 258
Query: 267 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGEL 326
G+KYRGEFEER+KK+++E+ Q+ ++LFIDE+HT+IGAG+AEG +DA+NILKPSLARGEL
Sbjct: 259 GSKYRGEFEERIKKVLQEVMQAGNVLLFIDEIHTIIGAGSAEGTMDASNILKPSLARGEL 318
Query: 327 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 386
Q IGATT++EYRKHIEKD ALERRFQP+ V EPS DE+++IL+GLR RYE HHK+ TD
Sbjct: 319 QLIGATTIEEYRKHIEKDAALERRFQPITVDEPSEDESVRILEGLRPRYEAHHKVSITDT 378
Query: 387 ALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNE 446
A+ A QLS +YISDRFLPDKAIDLIDEA SR+RL P E ++L +E+ ++ +K E
Sbjct: 379 AIKEAVQLSARYISDRFLPDKAIDLIDEAASRLRLADYAEPAEIKKLSEEITKLESQKEE 438
Query: 447 AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAW 506
AVR ++FE+AG+L+ ++ + +I+ + ++ + + D VV E ++ +VS W
Sbjct: 439 AVRAEEFERAGQLKKKQEKKEEKIAKIKEEWIKARR------DKKLVVGENEVADVVSLW 492
Query: 507 TGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIF 566
T IPV+K++ +E++RL K+E LH+RVIGQDEAV A+SRAIRR RVGLK+P+RPI SF+F
Sbjct: 493 TRIPVKKLTEEENERLKKLESVLHERVIGQDEAVSAVSRAIRRGRVGLKDPHRPIGSFLF 552
Query: 567 SGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLT 626
GPTGVGK+EL+KALA FG+E+A+IR+DMSE+ME+H+VSK++GSPPGYVGY EGGQL+
Sbjct: 553 LGPTGVGKTELSKALAEAMFGTEQALIRVDMSEYMEKHSVSKIVGSPPGYVGYEEGGQLS 612
Query: 627 EAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSS 686
E VRR PY+V+LFDEIEKAHPDVFN++LQ+L+DG +TDS+GR +DFKNT+LIMTSN G+S
Sbjct: 613 EKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKIDFKNTVLIMTSNAGAS 672
Query: 687 VIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK 746
I + +GF + K++ Y +K V +E+++ F+PEFLNR+DE++VF QL + +K
Sbjct: 673 RI-VSPKTLGF-AARENKETDYKNMKDGVMDEVRRLFKPEFLNRIDEIVVFHQLDRDNMK 730
Query: 747 EIADIMLKEVFDRLKTK-DIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
+I DI+L + R +++ +I+L + RE ++E+GY+P YGARPLRRAI LED +AE
Sbjct: 731 QIVDILLGNIEKRSESQMEIKLSFEDAAREFLIEKGYDPKYGARPLRRAIQNELEDKLAE 790
Query: 806 KMLAREIKEGDSVIV 820
ML ++K GD V+V
Sbjct: 791 AMLDDKVKAGDEVLV 805
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVL 139
M + F+E+A + + A A L ++YIG+EHLLLGL+R+G GVA +VL
Sbjct: 1 MADYFSEQAQEALEYAHRAAEELHNSYIGTEHLLLGLVRQGSGVAGQVL 49
>gi|257064641|ref|YP_003144313.1| chaperone ATPase [Slackia heliotrinireducens DSM 20476]
gi|256792294|gb|ACV22964.1| ATPase with chaperone activity, ATP-binding subunit [Slackia
heliotrinireducens DSM 20476]
Length = 865
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/734 (54%), Positives = 553/734 (75%), Gaps = 12/734 (1%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
F+ + +++ A EA ++G I +EHLLLG++REGEG A VL+ + + ++R +
Sbjct: 89 FSPRVKRILEQALREALQMGQGLISTEHLLLGVIREGEGGAVDVLKRMDVNLDDLRAALN 148
Query: 155 RMVGESTEAVGAGV---GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQ 211
+VG+ + V +G+ G G S N+ L+E+GT+LT A++G LDPV+GR +IERV+Q
Sbjct: 149 DLVGKPS-PVASGMPFFGTGESANESSMLDEFGTDLTAKAKKGLLDPVIGRSAEIERVLQ 207
Query: 212 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYR 271
+L RR KNNP LIGEPGVGKTA+ EGLA+ + +G VPD I K++ITLD+ LVAG+KYR
Sbjct: 208 VLSRRQKNNPLLIGEPGVGKTAVVEGLAELVVAGQVPDIIADKRIITLDVSALVAGSKYR 267
Query: 272 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGA 331
GEFEERLKK+++E+ +S ++ILFIDE+HT+IGAG+AEG+IDAA ILKP L+RGE+Q IGA
Sbjct: 268 GEFEERLKKVIKEVIKSKDVILFIDEMHTIIGAGSAEGSIDAAAILKPPLSRGEIQVIGA 327
Query: 332 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 391
TT++EYRKH+EKD ALERRFQ V V EP+ ++TI+IL+GLR+RYE HH + +TDEAL +A
Sbjct: 328 TTIEEYRKHLEKDSALERRFQTVMVNEPTEEQTIRILEGLRDRYEAHHHVHFTDEALHAA 387
Query: 392 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQ 451
+S +Y+ DRFLPDKAID++DEAG+R R+R+ LP+E REL+ E+R++ ++ AV Q
Sbjct: 388 VTMSMRYVQDRFLPDKAIDVLDEAGARARIRNRTLPDEVRELDDEIRKVRNDRESAVSKQ 447
Query: 452 DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPV 511
++E+A LRD+E +L+ + + + M KA EA V E DI I+S TG+PV
Sbjct: 448 EYEEAARLRDKEKELQEK------REEVMKKAAEEADRTITEVGEKDIADIISMSTGVPV 501
Query: 512 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 571
++ E+ +LL+MEE LH+R+IGQDEAV A+S+AIRR+R GLK+P RP SFIF GP+G
Sbjct: 502 SNLTEAETSKLLRMEEVLHERIIGQDEAVTALSKAIRRSRSGLKDPRRPAGSFIFLGPSG 561
Query: 572 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 631
VGK+EL+KALA + F SEEA++ DMSE+ME+H+VS+L+GSPPGYVG+ EGGQLT+AVR+
Sbjct: 562 VGKTELSKALAEFLFNSEEALVSFDMSEYMEKHSVSRLVGSPPGYVGFDEGGQLTKAVRQ 621
Query: 632 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 691
RPY+V+LFDEIEKAHPDVFN++LQILE+GRLTDS+GR+VDF+NT++IMTSNVG+ I +
Sbjct: 622 RPYSVLLFDEIEKAHPDVFNILLQILEEGRLTDSQGRSVDFRNTIVIMTSNVGARDIAQT 681
Query: 692 GRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI 751
+GF + +K S I S V ELK+ FRPEFLNRLDE+IVF+ LT ++ +I D+
Sbjct: 682 A-PLGFAPE-SQKGLSDKEINSRVMSELKKLFRPEFLNRLDEIIVFKSLTPEQILQIVDL 739
Query: 752 MLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLARE 811
M+ ++ DRL +D+ + +T + + +EG + + GARPLRRAI RLLED ++E++L
Sbjct: 740 MVADLRDRLIEQDMTINLTPAASKFIADEGTDVAMGARPLRRAIQRLLEDPISEQILDGT 799
Query: 812 IKEGDSVIVDVDSD 825
K G + VDV D
Sbjct: 800 WKAGSVIDVDVKDD 813
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 92 FERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRT 151
E+FTE+A V+ LAQEEAR +GSE+L+LGL +E EG+A++ L +G R
Sbjct: 3 LEKFTERARHVLALAQEEARSFDTPCVGSEYLILGLAKETEGMASQALSQVGVTYDKARD 62
Query: 152 QVIRM 156
V M
Sbjct: 63 VVAEM 67
>gi|342733080|ref|YP_004771919.1| negative regulator of genetic competence clpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|342330535|dbj|BAK57177.1| negative regulator of genetic competence clpC/mecB [Candidatus
Arthromitus sp. SFB-mouse-Japan]
Length = 812
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/778 (52%), Positives = 557/778 (71%), Gaps = 16/778 (2%)
Query: 56 NALDTFTCDFHSTVAVSLSSRRGKSGRAGGFVVKAMFERFTEKAIKVIMLAQEEARRLGH 115
N+ D + D + LS G +K T + KVI + +EA++LGH
Sbjct: 49 NSFDVYYDDIFKEIRTILS--------PGEIEIKNSEIPLTPRTKKVIESSIDEAKKLGH 100
Query: 116 NYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGSSGN 175
N++ EH+LL ++ E +GVA ++L+ G I Q I + + + N
Sbjct: 101 NHVSPEHILLAIINEPDGVAYKILDKKGVSVVKIWNQTINALNVTIDVQNPHEKEQQLKN 160
Query: 176 -KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAI 234
P L+++G +LTKLA EGKLDPV+GR + +RV++IL RR KNNPCLIG+PGVGKTAI
Sbjct: 161 LPTPVLDQHGRDLTKLANEGKLDPVIGRDTETQRVLEILCRRIKNNPCLIGDPGVGKTAI 220
Query: 235 AEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 294
EGLAQ+I G++P+ ++ K+VITLD+ L+AGTKYRGEFEERLKK+MEEIK+S IILF
Sbjct: 221 IEGLAQKIIEGNIPEILKNKRVITLDLSSLIAGTKYRGEFEERLKKIMEEIKRSRNIILF 280
Query: 295 IDEVHTLIGAGAAEGAIDAANILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 354
IDE+HT+IGAG AEGAIDA+NILKP+LARGE+QCIGATT+DEYRK+IEKD ALERRFQP+
Sbjct: 281 IDEIHTIIGAGGAEGAIDASNILKPALARGEIQCIGATTIDEYRKYIEKDTALERRFQPI 340
Query: 355 KVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDE 414
V EP+ +ETI IL G+R++YE HHK++ TDEA+ A LS ++I DR+LPDKAIDLIDE
Sbjct: 341 FVGEPNENETIDILIGIRDKYETHHKVKITDEAIKFAVSLSVRFIPDRYLPDKAIDLIDE 400
Query: 415 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALV 474
A +++R+R+ +P E +E+E+E+ ++ KEK EA+ +DFEKA LRD+E LK ++
Sbjct: 401 ASAKIRVRNLTVPIEVKEIEEEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERL---- 456
Query: 475 DKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVI 534
+ KE K + E D ++TE ++ +V++WT IPVEK++ ES++LLK+++ L RVI
Sbjct: 457 ENSKE--KWKVEKYDKEFILTEQELASVVASWTKIPVEKLTHTESEKLLKLDDILRSRVI 514
Query: 535 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 594
Q+EAV +++RA++R RVGLK+P RPI SFIF GPTGVGK+EL KALA FGSE+ +IR
Sbjct: 515 DQNEAVISVARAVKRGRVGLKDPKRPIGSFIFLGPTGVGKTELCKALADAVFGSEDNIIR 574
Query: 595 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 654
DMSEFME+HTVSK+IGSPPGYVG+ EGGQLTE VRR PY+++LFDEIEKAHPD+FN+ML
Sbjct: 575 FDMSEFMEKHTVSKIIGSPPGYVGFQEGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIML 634
Query: 655 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSL 714
QILEDG LTDS G+ + FKNT++I+TSN+G+++I K +GF + + YN+IK
Sbjct: 635 QILEDGHLTDSNGKKISFKNTIIILTSNIGANIINKDS-SLGFVNHKNGDEEVYNKIKDN 693
Query: 715 VTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQVTERFR 774
V ELK+ FRPEFLNRLD++IVF+ L K + +I D ML + R+ ++I + + +
Sbjct: 694 VLSELKKSFRPEFLNRLDDIIVFKPLDKKSLVKILDKMLDDFKSRVLNQNIIINFNDDVK 753
Query: 775 ERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLN 832
++E + YGARPLRR+I + +EDS+++++L IK DSV V + D + N
Sbjct: 754 NYILENSSSEKYGARPLRRSITKYIEDSLSDQILLGNIKANDSVEVILKDDKICYIKN 811
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 91 MFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENL 142
MFE+ TE+A KVI + ++A +LGH +IG+EH+LLGLLRE +G A ++L +
Sbjct: 1 MFEKLTERARKVISYSGDDALKLGHGFIGTEHILLGLLRE-DGPAQKILNSF 51
>gi|293191197|ref|ZP_06609130.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
gi|292820618|gb|EFF79587.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
Length = 826
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/741 (57%), Positives = 564/741 (76%), Gaps = 17/741 (2%)
Query: 95 FTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI 154
FT +A +V L+ EA +LGHNYIG+EHLLLGLL+EGEGVAA+VL GAD + +R VI
Sbjct: 84 FTPRAKRVFELSLREALQLGHNYIGTEHLLLGLLKEGEGVAAQVLTKQGADLAQVRQTVI 143
Query: 155 RMV---------GESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQ 205
+M+ G + G G GG + LE++G NLT+ A E KLDPV+GR+ +
Sbjct: 144 QMLSGYQRGDDEGRESVGAGVGGSGGPERSNSAILEQFGRNLTQAARENKLDPVIGRRVE 203
Query: 206 IERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLV 265
+ERV+Q+L RRTKNNP LIGEPGVGKTA+ EGLAQ I GDVP+TI+ K++ +LDMG LV
Sbjct: 204 MERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPETIKDKQIYSLDMGSLV 263
Query: 266 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPSLARGE 325
AG++YRG+FEERLKK+++EI+ +IILFIDE+HTL+GAGAAEG+IDAA +LKP LARGE
Sbjct: 264 AGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGSIDAAQMLKPMLARGE 323
Query: 326 LQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTD 385
LQ IGATT DEYRK+IEKD ALERRFQPVKV EPSVDET++ILKGLR+RYE HH++ TD
Sbjct: 324 LQTIGATTNDEYRKYIEKDAALERRFQPVKVEEPSVDETVEILKGLRDRYEAHHRVIITD 383
Query: 386 EALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKN 445
A+ +AA+L+ +YISDRFLPDKAIDL+DEAG+R+R+R P E RE+++++ ++ + K
Sbjct: 384 AAIQAAAELADRYISDRFLPDKAIDLVDEAGARLRIRRMTAPPELREIDEKIAEVRRNKE 443
Query: 446 EAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSA 505
A+ QDFEKA LRD E L + K KE + E+ ++ V + +I +++
Sbjct: 444 AAIDDQDFEKAASLRDEESKLNEE-----RKAKEEAWKGGESDEIAE-VGDQEIAEVLAM 497
Query: 506 WTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFI 565
TGIPV +++ E+ +LLKME+ LHKRVIGQDEAVKA++++IRR R GLK+PNRP SFI
Sbjct: 498 STGIPVVRLTQTETAKLLKMEDELHKRVIGQDEAVKALAQSIRRTRSGLKDPNRPGGSFI 557
Query: 566 FSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQL 625
F+GPTGVGK+ELAKALA + FG E+A+I+LDMSEF E+HT S+L G+PPGYVGY EGGQL
Sbjct: 558 FAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPPGYVGYDEGGQL 617
Query: 626 TEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGS 685
TE VRR+P++VVLFDE+EKAHPD+FN +LQILE+GRLTDS+GR VDFKNT++IMT+N+G+
Sbjct: 618 TEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNLGT 677
Query: 686 SVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEV 745
I K G GF D Y R+KS V EELKQ+FRPEFLNR+D+ IVF LTK E+
Sbjct: 678 RDINK-GVLTGFQT-ADNSTHDYGRMKSKVAEELKQHFRPEFLNRVDDTIVFPPLTKPEI 735
Query: 746 KEIADIMLKEVFDRLKTKDIELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAE 805
I D+M+ ++ R++ +D+ LQ+T+ RE + + G++P GARPLRRAI R +ED+++E
Sbjct: 736 SRIVDLMIAKLAKRMEAQDMRLQLTDDARELLADVGFDPVLGARPLRRAIQREIEDALSE 795
Query: 806 KMLAREIKEGDSVIVDVDSDG 826
++L E++ G V V V +G
Sbjct: 796 RILFGELQPGQVVTVGVTGEG 816
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 89 KAMFERFTEKAIKVIMLAQEEARRLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSN 148
+ MFERFT++A +V++LAQ+EAR L HNYIG+EHLLLGL+ EGEGVAA+ LE +
Sbjct: 3 RGMFERFTDRARRVVVLAQDEARGLKHNYIGTEHLLLGLISEGEGVAAKALETMEIKGEA 62
Query: 149 IRTQVIRMVGESTEAV 164
+R VI ++GE + V
Sbjct: 63 VRASVIEIIGEGEKPV 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,735,987,929
Number of Sequences: 23463169
Number of extensions: 552766049
Number of successful extensions: 2517825
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13659
Number of HSP's successfully gapped in prelim test: 13711
Number of HSP's that attempted gapping in prelim test: 2414916
Number of HSP's gapped (non-prelim): 68061
length of query: 848
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 696
effective length of database: 8,792,793,679
effective search space: 6119784400584
effective search space used: 6119784400584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)