Query 003097
Match_columns 848
No_of_seqs 762 out of 3657
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 16:58:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003097.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003097hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 2E-114 4E-119 1008.7 40.9 807 1-836 74-947 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 8.4E-43 1.8E-47 315.2 6.1 73 1-73 46-118 (118)
3 KOG4412 26S proteasome regulat 99.9 5.1E-21 1.1E-25 185.1 14.3 133 465-604 70-203 (226)
4 KOG4412 26S proteasome regulat 99.8 1.5E-20 3.3E-25 181.8 8.2 133 466-606 37-172 (226)
5 PHA02791 ankyrin-like protein; 99.8 1.4E-17 3E-22 180.3 16.4 129 466-604 60-191 (284)
6 PHA02743 Viral ankyrin protein 99.7 1.2E-17 2.6E-22 167.2 13.7 134 466-605 19-160 (166)
7 KOG0509 Ankyrin repeat and DHH 99.7 1.5E-17 3.2E-22 188.2 13.9 131 465-603 76-208 (600)
8 KOG0509 Ankyrin repeat and DHH 99.7 2E-17 4.3E-22 187.3 11.8 134 468-608 45-180 (600)
9 PHA02791 ankyrin-like protein; 99.7 8.4E-17 1.8E-21 174.2 16.2 124 465-598 28-153 (284)
10 PHA02859 ankyrin repeat protei 99.7 1.5E-16 3.3E-21 165.2 16.5 133 465-604 49-190 (209)
11 PHA02741 hypothetical protein; 99.7 1.1E-16 2.3E-21 160.7 14.3 127 465-599 19-158 (169)
12 PLN03192 Voltage-dependent pot 99.7 4.5E-16 9.8E-21 192.5 22.6 131 467-604 525-686 (823)
13 PHA02736 Viral ankyrin protein 99.7 7.5E-17 1.6E-21 159.1 11.4 129 466-600 16-153 (154)
14 PHA02875 ankyrin repeat protei 99.7 1.9E-16 4.1E-21 180.9 16.5 129 466-602 101-231 (413)
15 PHA02875 ankyrin repeat protei 99.7 2E-16 4.2E-21 180.9 16.2 147 451-605 48-200 (413)
16 PHA02874 ankyrin repeat protei 99.7 4.5E-16 9.8E-21 179.2 17.6 139 464-604 121-286 (434)
17 PHA02878 ankyrin repeat protei 99.7 3.7E-16 8E-21 182.1 16.3 144 453-606 149-300 (477)
18 PHA02878 ankyrin repeat protei 99.7 7.3E-16 1.6E-20 179.6 17.0 114 484-603 149-265 (477)
19 PHA03100 ankyrin repeat protei 99.7 1.3E-15 2.9E-20 177.2 18.1 151 448-605 118-282 (480)
20 PHA02795 ankyrin-like protein; 99.7 9.8E-16 2.1E-20 172.5 16.3 184 408-601 90-290 (437)
21 PHA02798 ankyrin-like protein; 99.7 7.4E-16 1.6E-20 180.1 15.7 157 451-607 89-292 (489)
22 PHA02874 ankyrin repeat protei 99.7 1.5E-15 3.2E-20 174.9 16.9 107 491-603 114-220 (434)
23 PHA02884 ankyrin repeat protei 99.6 1.7E-15 3.7E-20 164.3 15.2 121 466-593 31-157 (300)
24 PHA02859 ankyrin repeat protei 99.6 1.4E-15 3.1E-20 158.0 14.1 130 466-605 20-157 (209)
25 PHA03095 ankyrin-like protein; 99.6 1.5E-15 3.3E-20 176.2 16.0 131 465-601 185-318 (471)
26 PHA02716 CPXV016; CPX019; EVM0 99.6 1.9E-15 4E-20 180.9 16.3 134 465-605 210-398 (764)
27 KOG0508 Ankyrin repeat protein 99.6 4.7E-16 1E-20 169.3 9.9 138 448-594 94-236 (615)
28 PHA02989 ankyrin repeat protei 99.6 3.1E-15 6.8E-20 175.1 17.7 193 408-606 50-289 (494)
29 PHA02946 ankyin-like protein; 99.6 4E-15 8.8E-20 171.6 17.1 130 466-604 71-206 (446)
30 PHA03100 ankyrin repeat protei 99.6 2.6E-15 5.6E-20 174.8 15.5 149 447-603 44-206 (480)
31 PHA02716 CPXV016; CPX019; EVM0 99.6 2.6E-15 5.6E-20 179.6 15.7 151 448-605 152-351 (764)
32 KOG0508 Ankyrin repeat protein 99.6 8.6E-16 1.9E-20 167.2 9.0 129 467-603 84-213 (615)
33 KOG0512 Fetal globin-inducing 99.6 2.1E-15 4.6E-20 145.3 10.4 126 470-602 66-194 (228)
34 PHA02946 ankyin-like protein; 99.6 6E-15 1.3E-19 170.2 15.8 148 449-605 83-241 (446)
35 PHA02989 ankyrin repeat protei 99.6 8.9E-15 1.9E-19 171.3 17.4 126 466-598 144-314 (494)
36 PHA02876 ankyrin repeat protei 99.6 6.7E-15 1.5E-19 178.9 16.8 138 464-607 338-477 (682)
37 PHA03095 ankyrin-like protein; 99.6 9.5E-15 2.1E-19 169.6 16.8 104 491-600 73-181 (471)
38 KOG4177 Ankyrin [Cell wall/mem 99.6 3.6E-15 7.9E-20 181.5 13.7 244 331-599 379-632 (1143)
39 PF12796 Ank_2: Ankyrin repeat 99.6 5.1E-15 1.1E-19 131.9 10.6 89 505-603 1-89 (89)
40 KOG0502 Integral membrane anky 99.6 1.6E-15 3.5E-20 151.1 7.3 107 491-603 150-256 (296)
41 PHA02798 ankyrin-like protein; 99.6 6.9E-15 1.5E-19 172.0 13.8 151 448-604 48-217 (489)
42 KOG0510 Ankyrin repeat protein 99.6 1.1E-14 2.3E-19 167.8 14.1 135 465-604 271-408 (929)
43 KOG0502 Integral membrane anky 99.6 4E-15 8.6E-20 148.3 8.9 131 465-604 158-289 (296)
44 PHA02876 ankyrin repeat protei 99.6 4.2E-14 9.1E-19 172.0 17.1 129 467-601 273-403 (682)
45 PHA02741 hypothetical protein; 99.5 2.2E-14 4.8E-19 143.9 10.9 105 494-604 14-130 (169)
46 cd01175 IPT_COE IPT domain of 99.5 3.6E-14 7.8E-19 120.5 8.5 74 297-377 2-76 (85)
47 KOG0514 Ankyrin repeat protein 99.5 7E-14 1.5E-18 148.5 12.2 139 451-595 281-429 (452)
48 KOG0195 Integrin-linked kinase 99.5 3.1E-14 6.7E-19 146.6 9.1 128 464-599 31-159 (448)
49 KOG0195 Integrin-linked kinase 99.5 2.2E-14 4.8E-19 147.7 8.0 110 491-606 24-133 (448)
50 PHA02795 ankyrin-like protein; 99.5 8.5E-14 1.8E-18 157.0 13.4 133 465-606 114-254 (437)
51 PHA02917 ankyrin-like protein; 99.5 1.1E-13 2.3E-18 166.2 15.1 152 449-605 46-228 (661)
52 KOG0510 Ankyrin repeat protein 99.5 6.3E-14 1.4E-18 161.6 12.0 131 464-600 222-368 (929)
53 KOG4177 Ankyrin [Cell wall/mem 99.5 6E-14 1.3E-18 171.0 11.5 140 462-609 469-609 (1143)
54 PHA02917 ankyrin-like protein; 99.5 2.6E-13 5.6E-18 163.0 15.5 123 470-600 105-257 (661)
55 PHA02730 ankyrin-like protein; 99.5 2.4E-13 5.3E-18 160.1 14.9 143 450-599 358-524 (672)
56 PHA02743 Viral ankyrin protein 99.5 8.3E-14 1.8E-18 139.4 9.3 107 491-603 10-125 (166)
57 KOG0514 Ankyrin repeat protein 99.5 2.1E-13 4.6E-18 144.9 12.2 132 466-606 267-407 (452)
58 PF12796 Ank_2: Ankyrin repeat 99.5 2.3E-13 5.1E-18 121.1 10.6 86 471-562 1-87 (89)
59 PHA02884 ankyrin repeat protei 99.5 2.8E-13 6.2E-18 147.1 12.0 105 496-606 27-137 (300)
60 PHA02792 ankyrin-like protein; 99.4 6.2E-13 1.4E-17 155.2 13.2 142 450-599 320-479 (631)
61 KOG0505 Myosin phosphatase, re 99.4 4.1E-13 8.8E-18 149.6 10.8 137 463-607 69-265 (527)
62 PHA02730 ankyrin-like protein; 99.4 5.2E-13 1.1E-17 157.3 12.2 114 484-604 361-493 (672)
63 KOG0505 Myosin phosphatase, re 99.4 2.9E-13 6.4E-18 150.7 9.5 140 469-609 42-234 (527)
64 KOG0520 Uncharacterized conser 99.4 2.3E-12 5E-17 153.3 15.8 306 492-831 565-919 (975)
65 KOG0515 p53-interacting protei 99.4 4.4E-13 9.6E-18 147.5 8.6 119 471-596 554-675 (752)
66 cd00204 ANK ankyrin repeats; 99.4 6.5E-12 1.4E-16 116.5 14.3 121 465-593 5-126 (126)
67 KOG4214 Myotrophin and similar 99.4 1.2E-12 2.7E-17 114.0 8.4 103 471-581 6-108 (117)
68 COG0666 Arp FOG: Ankyrin repea 99.4 4.3E-12 9.4E-17 130.0 12.7 123 467-596 73-203 (235)
69 KOG1710 MYND Zn-finger and ank 99.4 3.5E-12 7.5E-17 131.8 10.9 126 464-596 9-135 (396)
70 PLN03192 Voltage-dependent pot 99.4 5E-12 1.1E-16 156.7 14.5 115 461-583 552-699 (823)
71 KOG0512 Fetal globin-inducing 99.3 6E-12 1.3E-16 121.7 9.7 115 464-585 94-210 (228)
72 KOG0507 CASK-interacting adapt 99.3 3.8E-12 8.2E-17 146.2 9.5 126 466-599 48-174 (854)
73 PHA02792 ankyrin-like protein; 99.3 1.2E-11 2.5E-16 144.7 12.9 132 458-595 62-239 (631)
74 PHA02736 Viral ankyrin protein 99.3 8.3E-12 1.8E-16 123.1 8.8 97 465-562 53-154 (154)
75 KOG4214 Myotrophin and similar 99.3 8.4E-12 1.8E-16 108.9 7.6 93 503-602 4-96 (117)
76 TIGR00870 trp transient-recept 99.3 8.1E-12 1.7E-16 153.5 10.6 132 465-598 126-282 (743)
77 cd00204 ANK ankyrin repeats; 99.3 3.2E-11 7E-16 111.8 12.1 99 497-601 3-101 (126)
78 PF13857 Ank_5: Ankyrin repeat 99.3 3.8E-12 8.2E-17 103.8 4.8 55 520-580 1-56 (56)
79 TIGR00870 trp transient-recept 99.3 1.9E-11 4.1E-16 150.3 11.8 148 445-598 60-242 (743)
80 PF13637 Ank_4: Ankyrin repeat 99.2 1.9E-11 4.1E-16 98.8 6.5 54 501-554 1-54 (54)
81 PTZ00322 6-phosphofructo-2-kin 99.2 4.4E-11 9.5E-16 144.5 11.7 85 505-595 86-170 (664)
82 PTZ00322 6-phosphofructo-2-kin 99.2 1E-10 2.2E-15 141.4 11.6 104 470-581 85-196 (664)
83 KOG3676 Ca2+-permeable cation 99.2 1.4E-10 3E-15 135.3 11.7 122 467-596 184-331 (782)
84 PF13857 Ank_5: Ankyrin repeat 99.2 3.2E-11 6.9E-16 98.3 4.6 51 491-541 5-56 (56)
85 KOG0507 CASK-interacting adapt 99.1 2.8E-11 6E-16 139.2 5.2 108 493-606 41-148 (854)
86 PF13637 Ank_4: Ankyrin repeat 99.1 8.5E-11 1.8E-15 94.9 6.6 54 534-593 1-54 (54)
87 COG0666 Arp FOG: Ankyrin repea 99.1 1.2E-09 2.7E-14 111.7 13.9 106 492-603 64-177 (235)
88 KOG0515 p53-interacting protei 99.1 2.9E-10 6.2E-15 125.7 8.2 90 506-601 555-644 (752)
89 KOG3676 Ca2+-permeable cation 99.0 4.8E-10 1E-14 130.9 10.0 131 466-603 142-305 (782)
90 PF01833 TIG: IPT/TIG domain; 99.0 1E-09 2.2E-14 96.6 7.9 84 296-383 1-85 (85)
91 KOG4369 RTK signaling protein 98.9 1.7E-09 3.7E-14 127.5 8.9 253 329-606 760-1027(2131)
92 cd01179 IPT_plexin_repeat2 Sec 98.9 5.7E-09 1.2E-13 92.7 9.7 83 296-384 1-84 (85)
93 cd00102 IPT Immunoglobulin-lik 98.8 1.5E-08 3.2E-13 90.2 9.3 84 296-384 1-88 (89)
94 KOG4369 RTK signaling protein 98.8 1.9E-09 4E-14 127.1 4.1 129 466-602 756-886 (2131)
95 KOG0818 GTPase-activating prot 98.8 1.9E-08 4.1E-13 110.9 11.1 97 494-596 120-223 (669)
96 KOG1710 MYND Zn-finger and ank 98.8 1.5E-08 3.3E-13 105.3 8.7 98 502-604 13-110 (396)
97 KOG0783 Uncharacterized conser 98.7 8.4E-09 1.8E-13 119.2 3.8 83 494-582 45-128 (1267)
98 KOG0782 Predicted diacylglycer 98.7 7.4E-08 1.6E-12 107.3 9.5 121 469-596 868-990 (1004)
99 KOG0506 Glutaminase (contains 98.5 7E-08 1.5E-12 106.1 5.6 94 498-597 503-597 (622)
100 cd00603 IPT_PCSR IPT domain of 98.5 5.8E-07 1.2E-11 80.4 9.5 85 296-384 1-89 (90)
101 KOG0705 GTPase-activating prot 98.5 8.1E-07 1.8E-11 99.9 11.6 94 467-561 624-721 (749)
102 PF13606 Ank_3: Ankyrin repeat 98.5 1.7E-07 3.7E-12 66.2 4.1 30 533-562 1-30 (30)
103 cd01180 IPT_plexin_repeat1 Fir 98.4 8.6E-07 1.9E-11 80.3 8.9 87 296-384 1-93 (94)
104 smart00429 IPT ig-like, plexin 98.4 8.6E-07 1.9E-11 79.3 8.0 83 296-383 2-89 (90)
105 KOG0160 Myosin class V heavy c 98.3 3.4E-06 7.4E-11 101.6 11.9 84 644-738 672-758 (862)
106 PF00023 Ank: Ankyrin repeat H 98.3 9.9E-07 2.2E-11 63.6 4.5 30 533-562 1-30 (33)
107 KOG0818 GTPase-activating prot 98.3 2.3E-06 4.9E-11 94.9 9.1 85 470-555 136-221 (669)
108 COG5022 Myosin heavy chain [Cy 98.2 5.2E-05 1.1E-09 94.3 20.0 146 643-832 743-894 (1463)
109 KOG0705 GTPase-activating prot 98.2 2.3E-06 5.1E-11 96.3 7.8 90 506-601 629-722 (749)
110 KOG0522 Ankyrin repeat protein 98.2 2.5E-06 5.5E-11 95.9 8.0 87 470-556 23-110 (560)
111 KOG0522 Ankyrin repeat protein 98.2 2.7E-06 5.8E-11 95.7 8.2 87 503-595 22-110 (560)
112 cd01181 IPT_plexin_repeat3 Thi 98.2 4.4E-06 9.6E-11 76.3 7.7 72 296-370 1-80 (99)
113 KOG0160 Myosin class V heavy c 98.2 1.3E-05 2.9E-10 96.6 13.7 77 680-757 674-754 (862)
114 KOG0506 Glutaminase (contains 98.2 1.7E-06 3.7E-11 95.5 5.2 95 466-561 505-600 (622)
115 PF00023 Ank: Ankyrin repeat H 98.2 2.4E-06 5.2E-11 61.6 4.2 33 500-532 1-33 (33)
116 PF13606 Ank_3: Ankyrin repeat 98.2 2.2E-06 4.9E-11 60.5 3.9 30 500-529 1-30 (30)
117 cd02849 CGTase_C_term Cgtase ( 98.1 1.3E-05 2.9E-10 70.3 9.0 79 296-383 3-81 (81)
118 KOG0521 Putative GTPase activa 98.0 6.6E-06 1.4E-10 99.9 6.4 100 490-595 643-744 (785)
119 KOG2384 Major histocompatibili 98.0 1.4E-05 3E-10 79.3 7.0 66 524-595 2-68 (223)
120 KOG0783 Uncharacterized conser 97.9 5.1E-06 1.1E-10 96.8 2.1 74 527-606 45-119 (1267)
121 KOG3609 Receptor-activated Ca2 97.8 5.4E-05 1.2E-09 89.9 9.4 130 465-602 23-160 (822)
122 KOG0164 Myosin class I heavy c 97.8 0.00021 4.6E-09 82.7 13.4 112 699-841 697-808 (1001)
123 cd00604 IPT_CGTD IPT domain (d 97.7 0.00016 3.5E-09 63.5 8.5 80 296-384 1-80 (81)
124 KOG0511 Ankyrin repeat protein 97.6 0.0002 4.3E-09 77.6 8.9 60 503-562 38-97 (516)
125 KOG2384 Major histocompatibili 97.6 0.00013 2.9E-09 72.5 6.5 70 491-560 2-72 (223)
126 KOG0164 Myosin class I heavy c 97.4 0.00097 2.1E-08 77.5 11.9 82 644-740 695-789 (1001)
127 KOG0511 Ankyrin repeat protein 97.3 0.00038 8.2E-09 75.6 6.9 60 535-600 37-96 (516)
128 COG5022 Myosin heavy chain [Cy 97.0 0.022 4.8E-07 71.8 17.9 117 678-827 744-866 (1463)
129 PF00612 IQ: IQ calmodulin-bin 97.0 0.0011 2.4E-08 42.8 3.5 19 722-740 2-20 (21)
130 KOG0782 Predicted diacylglycer 96.8 0.0016 3.5E-08 73.6 5.3 76 520-599 885-960 (1004)
131 KOG0521 Putative GTPase activa 96.6 0.0019 4E-08 79.1 4.7 89 466-556 655-744 (785)
132 KOG2505 Ankyrin repeat protein 96.5 0.04 8.8E-07 62.3 13.7 71 514-593 404-480 (591)
133 PF00612 IQ: IQ calmodulin-bin 96.5 0.0042 9E-08 40.1 3.5 20 804-823 2-21 (21)
134 KOG3836 HLH transcription fact 96.3 0.0015 3.2E-08 75.6 1.4 208 297-562 244-457 (605)
135 smart00248 ANK ankyrin repeats 96.1 0.0091 2E-07 39.4 4.1 28 534-561 2-29 (30)
136 cd00602 IPT_TF IPT domain of e 96.0 0.028 6.1E-07 51.5 7.7 82 297-384 2-100 (101)
137 cd01178 IPT_NFAT IPT domain of 95.9 0.023 5.1E-07 51.6 6.8 82 295-384 1-100 (101)
138 PTZ00014 myosin-A; Provisional 95.9 0.016 3.6E-07 71.6 7.9 35 723-757 779-813 (821)
139 cd01176 IPT_RBP-Jkappa IPT dom 95.7 0.035 7.7E-07 48.8 6.7 66 312-384 20-96 (97)
140 smart00015 IQ Short calmodulin 95.6 0.015 3.3E-07 39.5 3.2 21 721-741 3-23 (26)
141 KOG2128 Ras GTPase-activating 95.3 0.24 5.2E-06 62.6 14.5 145 649-826 481-645 (1401)
142 KOG2128 Ras GTPase-activating 95.2 0.059 1.3E-06 67.8 9.1 92 650-745 540-646 (1401)
143 KOG3610 Plexins (functional se 95.1 0.05 1.1E-06 67.7 8.1 88 292-385 139-230 (1025)
144 smart00248 ANK ankyrin repeats 95.0 0.039 8.5E-07 36.2 3.9 29 500-528 1-29 (30)
145 PTZ00014 myosin-A; Provisional 94.9 0.06 1.3E-06 66.7 8.1 41 699-739 778-818 (821)
146 cd01177 IPT_NFkappaB IPT domai 94.8 0.11 2.3E-06 47.4 7.3 82 297-384 2-101 (102)
147 smart00015 IQ Short calmodulin 94.6 0.036 7.8E-07 37.7 2.9 21 644-664 2-22 (26)
148 KOG2505 Ankyrin repeat protein 94.0 0.094 2E-06 59.5 6.0 46 497-542 426-471 (591)
149 KOG3609 Receptor-activated Ca2 93.5 0.13 2.9E-06 61.9 6.6 87 467-562 62-159 (822)
150 KOG0163 Myosin class VI heavy 90.3 17 0.00037 43.8 18.3 48 651-698 779-832 (1259)
151 PF06128 Shigella_OspC: Shigel 85.0 2.3 5E-05 44.2 6.5 95 501-599 179-280 (284)
152 PF08549 SWI-SNF_Ssr4: Fungal 74.5 4.2 9.1E-05 48.6 5.1 65 4-75 78-156 (669)
153 KOG0942 E3 ubiquitin protein l 71.7 6.2 0.00013 48.5 5.6 35 798-832 24-58 (1001)
154 PF06128 Shigella_OspC: Shigel 70.8 7.5 0.00016 40.6 5.3 48 513-560 229-280 (284)
155 KOG0162 Myosin class I heavy c 69.8 12 0.00026 44.9 7.3 45 698-745 696-740 (1106)
156 KOG0161 Myosin class II heavy 69.1 56 0.0012 44.5 13.9 40 718-757 770-812 (1930)
157 KOG0165 Microtubule-associated 69.0 2.5E+02 0.0055 34.6 17.7 139 678-824 147-296 (1023)
158 KOG3836 HLH transcription fact 68.2 7.1 0.00015 46.2 5.0 46 491-536 419-464 (605)
159 KOG3610 Plexins (functional se 63.8 8 0.00017 48.9 4.6 76 293-369 47-126 (1025)
160 KOG4427 E3 ubiquitin protein l 61.5 21 0.00046 43.1 7.2 34 676-711 27-60 (1096)
161 KOG0942 E3 ubiquitin protein l 59.5 18 0.00038 44.7 6.3 29 694-722 25-53 (1001)
162 KOG4427 E3 ubiquitin protein l 58.9 26 0.00056 42.5 7.3 35 694-734 26-60 (1096)
163 KOG0162 Myosin class I heavy c 54.9 22 0.00047 42.9 5.8 39 790-831 686-724 (1106)
164 KOG0163 Myosin class VI heavy 54.0 5.2E+02 0.011 32.0 22.4 24 643-666 811-834 (1259)
165 KOG0161 Myosin class II heavy 52.1 8.5E+02 0.018 34.0 21.9 43 643-693 771-813 (1930)
166 PF03158 DUF249: Multigene fam 51.6 23 0.0005 36.0 4.7 44 538-593 147-190 (192)
167 PF09099 Qn_am_d_aIII: Quinohe 47.5 45 0.00098 29.4 5.3 64 296-368 2-70 (81)
168 KOG0377 Protein serine/threoni 47.3 35 0.00077 38.9 5.7 20 698-717 17-36 (631)
169 PF11929 DUF3447: Domain of un 45.9 29 0.00064 29.8 4.0 47 503-556 8-54 (76)
170 PF14545 DBB: Dof, BCAP, and B 43.2 66 0.0014 31.5 6.2 68 301-374 3-79 (142)
171 PF11929 DUF3447: Domain of un 40.9 42 0.00092 28.8 4.2 46 537-595 9-54 (76)
172 KOG0377 Protein serine/threoni 36.0 71 0.0015 36.6 5.9 25 801-825 15-39 (631)
173 PF03106 WRKY: WRKY DNA -bindi 33.0 16 0.00036 30.2 0.3 9 7-15 2-10 (60)
174 smart00774 WRKY DNA binding do 30.2 20 0.00043 29.6 0.4 9 7-15 2-10 (59)
175 TIGR03437 Soli_cterm Solibacte 30.0 1.9E+02 0.0042 30.4 7.7 64 309-372 3-75 (215)
176 PF08763 Ca_chan_IQ: Voltage g 29.5 68 0.0015 23.7 2.9 18 699-716 10-27 (35)
177 KOG0165 Microtubule-associated 28.6 1E+03 0.022 29.8 13.8 98 643-740 191-294 (1023)
178 KOG3743 Recombination signal b 27.8 69 0.0015 37.5 4.2 69 310-385 506-585 (622)
179 KOG1709 Guanidinoacetate methy 25.4 52 0.0011 34.5 2.5 48 553-606 1-48 (271)
180 PF03158 DUF249: Multigene fam 25.3 96 0.0021 31.7 4.2 44 505-554 147-190 (192)
181 KOG4229 Myosin VII, myosin IXB 24.3 50 0.0011 42.4 2.6 82 648-742 922-1010(1062)
182 COG4674 Uncharacterized ABC-ty 22.6 84 0.0018 32.7 3.3 45 328-372 7-54 (249)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=1.8e-114 Score=1008.74 Aligned_cols=807 Identities=42% Similarity=0.635 Sum_probs=601.7
Q ss_pred CcccccccCccccccCCCcchHHhhhhhccCCeeeEEEeeeccCCCCCcceeeeeeccCCCCceEEEEeeecCCCCCCC-
Q 003097 1 MLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPAT- 79 (848)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (848)
||||||||||+|||||||||||||||||||||+|+||||||||+++|||||||||||+++++||||||||||++..-+.
T Consensus 74 ~lr~fRKDGh~WkKkkDGKtirEaHe~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~ 153 (975)
T KOG0520|consen 74 VLRYFRKDGHNWKKKKDGKTIREAHEKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAK 153 (975)
T ss_pred HHHHHhhcchhhhhcCCCCcChHHHHhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeeccccccccc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999944332
Q ss_pred -CCCCCCCCCCCCCccccccccccCCCCCcc---c-----------cCcccccCCCCCccccccccccccccccc-cccc
Q 003097 80 -PPNSHSSSISDQSAPLLLSEEFNSGAGHAY---S-----------AGGKELQAPNESLTVQNHEMRLHELNTLE-WDDL 143 (848)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 143 (848)
+.....+.++|.- ++..+.+.+..++.. + +....++.-.+ ...+|..+++..+..+ |..+
T Consensus 154 ~~~~~~~s~~sd~~--~S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~~~~~~g~~~~--~s~~h~i~~~~~~s~~~~~~~ 229 (975)
T KOG0520|consen 154 GAGEIFSSIISDKA--WSLNQLAGQLSPIFHNHSSVNEDVAEINSNQTGNALGSVFG--NSRNHRIRLHEVNSLDPLYKL 229 (975)
T ss_pred Cccccccccccccc--ccHHHhhcccCcchhcccchHHHHHHHhhhccccccccccC--cchhhhhcccccCCccccccc
Confidence 1112223444443 333333322222111 0 11111111001 2358999999999999 9999
Q ss_pred cccCCCCCCCCCCCCCC--------------ccccccccccccCCCCCCCCCCCCCC-ccccccCCCCCCCCCC-ccCCC
Q 003097 144 VVTNDSNDSTEPRGDKF--------------SHFDQQNHTAIKGAASNGSFFPSHDS-YAEVSSGGCLTSLSQP-IDRSN 207 (848)
Q Consensus 144 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 207 (848)
.++.++.+...|.-... .++.....+..+++..- ..+..+ +..|.+ +..+..+ +..++
T Consensus 230 p~s~~s~~~~~~~~~~~~~~~~~~~~rs~~~s~~te~l~n~~~~~~~~---g~s~s~~l~~i~~---~~~~~~~~~~~p~ 303 (975)
T KOG0520|consen 230 PVSDDSLNLSAPKPIDLPKGPTSVKQRSSSPSYFTEILGNAPSGLVSQ---GNSLSSSLQRISS---FTGLDNAAYEQPN 303 (975)
T ss_pred cccCCccccccCCCcccccCCcchhhcCCCCcchhhhcccCCCccccc---ccccccchhhccc---ccccccccccCCc
Confidence 99988644443322111 11111111111110000 000000 000100 0000000 00000
Q ss_pred CccccCCccchhhccCCccc---ccccccccccccCCCc----cc-chhcCCCCCCCchhhhhHHhhcCCCC--------
Q 003097 208 NTQFNNLDGVYSELMGTQSS---VSSQRNEFGEVCTGDS----LD-ILAGDGLQSQDSFGKWMNYIMTDSPG-------- 271 (848)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~sf~~~~~~~~~~s~~-------- 271 (848)
...|. ...+..-+..+. ...+...........+ .+ .+.++||++.|||++|++-+...+++
T Consensus 304 ~~nf~---~~ss~~s~~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~~~~~l~sgdsf~~~~~t~~e~~d~~q~~s~~~ 380 (975)
T KOG0520|consen 304 SQNFE---PNSSLNSHVTGQSYGQGLQARSPSATSESRPITSAADAALSELGLKSGDSFSRWASTFGEISDLGQDPSGEA 380 (975)
T ss_pred ccccc---ccccCCCCccccccCccccCCCcccccccCCcchhhccccccccccccccccchhhhhcccccCCCCCcccc
Confidence 01110 000000000000 0011111111111111 22 46689999999999999986543322
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCC
Q 003097 272 SVDDPVLEPSISS--GHHQFTVPEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAG 349 (848)
Q Consensus 272 ~~~~~~~~~~~~~--~~~~s~~~~~~~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~g 349 (848)
.|.. ...+.+.. ..++| .++|+|+|+||||+|+|++||+||+|+|++. +....+|+||||+++|||++|++|
T Consensus 381 ~~~p-~~~~~~~~~s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~~----~~~~~~ysc~Fg~~~VPAeliq~G 454 (975)
T KOG0520|consen 381 VWTP-ENDPMGPPGSFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFPQ----DETRSNYSCMFGEQRVPAELIQEG 454 (975)
T ss_pred cccc-CCCcCCCcccccCCC-CCcceeeeeccCcccccCCCCcEEEEecCcc----ccCCCceEEEeCCccccHHHhhcc
Confidence 1211 11111111 34445 4499999999999999999999999999743 235889999999999999999999
Q ss_pred eeeeecCCCCCceeEEEEEeC-CCCCcccccccccCCCC--CccCCCCccccchhhHHHHHHHHHHHHhccccccccccC
Q 003097 350 VYRCFLPPHSPGLFLLYMSLD-GHKPISQVLNFEYRSPQ--LHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSS 426 (848)
Q Consensus 350 vl~C~~Pph~~G~Vpl~v~~~-~~~~~Sev~~Fey~~~~--~~~~~~~~~~~~~~~e~~l~~Rl~~LL~~~~~~l~il~~ 426 (848)
|||||||||+||.|+|||+|+ ++..|||+++|+|...+ .+++.+ -++...++.++.||..|+... .+++++
T Consensus 455 VLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s---~~d~~~~~sl~~rl~~~~~r~---~~~~~s 528 (975)
T KOG0520|consen 455 VLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLS---WEDFLFQMSLLHRLETMLNRK---QSILSS 528 (975)
T ss_pred eeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccc---cccchhhhHHHHHHHHHHHHh---HhHhhc
Confidence 999999999999999999999 88999999999999843 344433 123456777888888887643 245666
Q ss_pred CCCCCChHHHHH--HhhhhhcCCCCHHH-HHHHhCCCCCCcccccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCC
Q 003097 427 KVPPNSLKEAKK--FASKSTCISNSWAY-LFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHG 501 (848)
Q Consensus 427 k~~~~~l~e~~~--~~~~i~~~~~~~~~-l~~~l~~~~~~~~~~~~~Ll~aa~~~~l~e~L~~~L~~--Ga~in~~D~~G 501 (848)
+..+.+..++.. ++.+++...+.|.+ ++.....+.......++.++.-.++..+..||++.+++ |......|.+|
T Consensus 529 ~~~~~n~~~~~~~~l~skv~~l~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~ 608 (975)
T KOG0520|consen 529 KPSTENTSDAESGNLASKVVHLLNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDG 608 (975)
T ss_pred cCCccccccccchhHHHHHHHHHHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccC
Confidence 777777777777 88899988999999 88888888888888888888888888889999999999 55666799999
Q ss_pred CchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003097 502 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 502 ~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
+..+|++|..|+.+.+.+.++.|..++++|..||||||||+.+|++.++..|++.|++.+++|||+..+..|.|+.++|.
T Consensus 609 qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~ 688 (975)
T KOG0520|consen 609 QGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLAR 688 (975)
T ss_pred CChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHhhhhhhccccccccc-cccCcccccccccc-ccc--CccchhhhhhhhhhHHhhhHHHHHHHHHHHhh
Q 003097 582 KKGFDGLAAFLSEQALVAQFNDMTLAG-NISGSLQTGSTITV-DTQ--NLTEDEVYLKDTLSAYRTAAEAAARIQAAFRE 657 (848)
Q Consensus 582 ~~G~~~iv~~Ll~~Ga~~~~~~~~l~~-~is~~~~~~~~~~~-~~~--~~~~~~lsl~~sL~a~r~~~~AA~~IQ~~~R~ 657 (848)
.+||.++..+|.++.+..++.++.+.+ ++++.......... .+. +...+..+++++|.++|++++||.+||++||+
T Consensus 689 s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~ 768 (975)
T KOG0520|consen 689 ANGHKGIAGYLSEKALSAHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRA 768 (975)
T ss_pred cccccchHHHHhhhHHHHHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhh
Confidence 999999999999999999999999988 55555444433322 222 22344556999999999999999999999999
Q ss_pred hHHHHHHHHhh-cCChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 003097 658 HSLKVQTKAIR-FSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQV 736 (848)
Q Consensus 658 ~~~Rkr~~~~~-~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~~ 736 (848)
..++++..+.. ......-.......++++..++++..|....+|..||.+||+|+.|+.|...|+.+++||+++||++.
T Consensus 769 ~~~~~~~a~~i~~~~~~~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~ 848 (975)
T KOG0520|consen 769 QSFQKKQAREIMDATKEQISEELAVSMKASSAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQV 848 (975)
T ss_pred hhhhhhhHHHHHhhcchhhhhhhhhhhhcccchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhH
Confidence 99986654432 22334555666777889999987777777889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003097 737 RKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHE---GDAEEDFYRASRKQAEERVERSVVRVQSMF 813 (848)
Q Consensus 737 Rk~y~~~~~aa~~IQ~~~R~~r~~rk~~r~lr~~~~~~~~~~~q~q~---~~~~~~~l~~~Rkq~~~~~~~AvirIQs~~ 813 (848)
|+.|+++.|++.++.+.+.+||+.++.+|+|+.++... .|..+ .++++++|+..|++.++++.+|+++||+|+
T Consensus 849 r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e----~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~ 924 (975)
T KOG0520|consen 849 RKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFE----EQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMF 924 (975)
T ss_pred hhhhheechhhhHHHHHHHHHHHhhhhhcccccccchh----ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999887531 11111 169999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 003097 814 RSKKAQEEYRRMKLAHDQAKLEY 836 (848)
Q Consensus 814 R~~~aRr~~~~lk~~~~~ak~e~ 836 (848)
|.+++|.+|+|++...++.++.+
T Consensus 925 rs~~a~qqyrR~~~~~~~~~~~~ 947 (975)
T KOG0520|consen 925 RSPKAQQQYRRLLLVYEQYQESY 947 (975)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999988865
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=8.4e-43 Score=315.17 Aligned_cols=73 Identities=67% Similarity=1.203 Sum_probs=71.5
Q ss_pred CcccccccCccccccCCCcchHHhhhhhccCCeeeEEEeeeccCCCCCcceeeeeeccCCCCceEEEEeeecC
Q 003097 1 MLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETH 73 (848)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (848)
++||||||||+|||||||||||||||||||||+|+||||||||+++||||||||||||++|+||||||||||+
T Consensus 46 ~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 46 VVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEVLNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred HhhhhhcccceeEEcCCCCchhhhhhhhccCceeeeEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999985
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=5.1e-21 Score=185.09 Aligned_cols=133 Identities=23% Similarity=0.216 Sum_probs=121.9
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
+.+.+|||.+|..++.. .+..++.. |+++|..+..|+|+|||||..|..+++.+|+++|+.|+.+|..|.||||-|+.
T Consensus 70 daGWtPlhia~s~g~~e-vVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAa 148 (226)
T KOG4412|consen 70 DAGWTPLHIAASNGNDE-VVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAA 148 (226)
T ss_pred ccCCchhhhhhhcCcHH-HHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHh
Confidence 45778999988888655 34555555 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003097 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
-|..+++++|+..|+.+|. +|..|+||||.|...||.+++.+|+++||+..+.+.
T Consensus 149 vGklkvie~Li~~~a~~n~------qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edk 203 (226)
T KOG4412|consen 149 VGKLKVIEYLISQGAPLNT------QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDK 203 (226)
T ss_pred ccchhhHHHHHhcCCCCCc------ccccCccHHHHHHhccCchHHHHHHHhccceeeccc
Confidence 9999999999999999998 899999999999989999999999999999887776
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=1.5e-20 Score=181.83 Aligned_cols=133 Identities=19% Similarity=0.172 Sum_probs=122.5
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCCCchHHHHHHcCCHHHHHHHHHC-CCCCccccCCCCcHHHHHH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~--Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~-Ga~in~~D~~G~TpLh~Aa 542 (848)
+++++||.+|.-++.. ++.+|++ +..+|.+|..|+||||.||..|+.++|+.|+.+ |+++|..+..|.||||||+
T Consensus 37 D~Rt~LHwa~S~g~~e--iv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAa 114 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVE--IVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAA 114 (226)
T ss_pred cCCceeeeeeecCchh--HHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhh
Confidence 6889999999988766 5555553 888999999999999999999999999999988 9999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003097 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l 606 (848)
..|+.+|+.+|++.|+.+++ +|..|.||||-|+.-|..+++++|+..|+..+..+...
T Consensus 115 gK~r~eIaqlLle~ga~i~~------kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G 172 (226)
T KOG4412|consen 115 GKGRLEIAQLLLEKGALIRI------KDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYG 172 (226)
T ss_pred cCChhhHHHHHHhcCCCCcc------cccccCchhHHHHhccchhhHHHHHhcCCCCCcccccC
Confidence 99999999999999999999 89999999999999999999999999998887776543
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.75 E-value=1.4e-17 Score=180.29 Aligned_cols=129 Identities=19% Similarity=0.222 Sum_probs=91.7
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCC-cHHHHHHH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGW-TALHWAAY 543 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~-TpLh~Aa~ 543 (848)
++.+||+.|+..++.. +++.|+. |++++..|..|.||||+|+..|+.+++++|+.+|++++.++..|+ ||||+|+.
T Consensus 60 d~~TpLh~Aa~~g~~e--iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~ 137 (284)
T PHA02791 60 ENEFPLHQAATLEDTK--IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 137 (284)
T ss_pred CCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHH
Confidence 3567777777766654 4444444 778888888888888888888888888888888888877777775 67777777
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003097 544 YGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d-~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
.|+.++|++|+++|++. .| ..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 138 ~g~~eivk~LL~~~~~~--------~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~ 191 (284)
T PHA02791 138 LNDVSIVSYFLSEIPST--------FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNS 191 (284)
T ss_pred cCCHHHHHHHHhcCCcc--------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence 77777777777766432 11 2467777777777777777777777777666544
No 6
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.75 E-value=1.2e-17 Score=167.19 Aligned_cols=134 Identities=22% Similarity=0.190 Sum_probs=116.6
Q ss_pred cccchHHHHHHcCCcHHH--HHHHHHc-CCCCccccCCCCchHHHHHHcCCHHH---HHHHHHCCCCCcccc-CCCCcHH
Q 003097 466 EAKDSFFELTLKSKLKEW--LLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWA---ILLFSWSGLSLDFRD-KYGWTAL 538 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~--L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~---v~~LL~~Ga~in~~D-~~G~TpL 538 (848)
+..+.++.+|..+++... +++.|.. |.+++..|..|+||||+|+..|..++ +++|+..|+++|.+| ..|.|||
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL 98 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL 98 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence 466789999998887531 3334444 88999999999999999999988654 789999999999998 5899999
Q ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003097 539 HWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 539 h~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~ 605 (848)
|+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++.+-.+..
T Consensus 99 h~A~~~g~~~iv~~Ll~~~gad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 160 (166)
T PHA02743 99 HIAASTKNYELAEWLCRQLGVNLGA------INYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSI 160 (166)
T ss_pred HHHHHhCCHHHHHHHHhccCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccC
Confidence 99999999999999995 8999988 8899999999999999999999999999998666554
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.73 E-value=1.5e-17 Score=188.25 Aligned_cols=131 Identities=25% Similarity=0.317 Sum_probs=118.2
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCcccc-CCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D-~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
.++.+.||.||+++++. +.+.|++ |+++|..+ .-|.|||||||++|+..+|.+|+++|||++.+|..|.||||+|+
T Consensus 76 ~~g~tlLHWAAiNNrl~--v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~ 153 (600)
T KOG0509|consen 76 REGVTLLHWAAINNRLD--VARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAA 153 (600)
T ss_pred cCCccceeHHHHcCcHH--HHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHH
Confidence 46778899999999887 6777666 99999987 66999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003097 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~ 603 (848)
..|+.-+|.+||..|++++. +|.+|+||||+|+..|+...+..|++-|+.....+
T Consensus 154 ~~~~~~~vayll~~~~d~d~------~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d 208 (600)
T KOG0509|consen 154 QFGHTALVAYLLSKGADIDL------RDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD 208 (600)
T ss_pred HhCchHHHHHHHHhcccCCC------cCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence 99999999999999999988 89999999999999999988999999987776655
No 8
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.72 E-value=2e-17 Score=187.26 Aligned_cols=134 Identities=25% Similarity=0.313 Sum_probs=122.3
Q ss_pred cchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcccc-CCCCcHHHHHHHcC
Q 003097 468 KDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWAAYYG 545 (848)
Q Consensus 468 ~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D-~~G~TpLh~Aa~~G 545 (848)
...++.|+..|.++. +.+++.. |.+++..|.+|.|+|||||.++..+++++||++|++||..+ .-|.|||||||.+|
T Consensus 45 ~~~~v~A~q~G~l~~-v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 45 LDDIVKATQYGELET-VKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhhHhhcchHHH-HHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence 345777888888775 6666666 89999999999999999999999999999999999999998 67899999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccccc
Q 003097 546 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 608 (848)
Q Consensus 546 ~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l~~ 608 (848)
+..+|.+|+++|||+++ +|..|.||+|+|+..|+.-++.+|+.+|++.++.|.+...
T Consensus 124 ~~~vv~lLlqhGAdpt~------~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grT 180 (600)
T KOG0509|consen 124 HISVVDLLLQHGADPTL------KDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRT 180 (600)
T ss_pred cHHHHHHHHHcCCCCce------ecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCC
Confidence 99999999999999999 8999999999999999999999999999999998876544
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=99.72 E-value=8.4e-17 Score=174.17 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=111.3
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.|+..++.. +++.|+. |++++..| |.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+.
T Consensus 28 ~~G~TpLh~Aa~~g~~e--iv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~ 103 (284)
T PHA02791 28 VHGHSALYYAIADNNVR--LVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD 103 (284)
T ss_pred CCCCcHHHHHHHcCCHH--HHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 45889999999888765 5555555 99888764 7899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCC-CHHHHHHHcCChHHHHHHHhhhhh
Q 003097 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGL-NAADIASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~-TpL~lA~~~G~~~iv~~Ll~~Ga~ 598 (848)
.|+.+++++|+++|++++. ++..|. ||||+|+..|+.+++++|+++|.+
T Consensus 104 ~g~~eivk~Ll~~gadin~------~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~ 153 (284)
T PHA02791 104 SGNMQTVKLFVKKNWRLMF------YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 153 (284)
T ss_pred cCCHHHHHHHHHCCCCcCc------cCCCCCcHHHHHHHHcCCHHHHHHHHhcCCc
Confidence 9999999999999999988 677774 899999999999999999998753
No 10
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.5e-16 Score=165.22 Aligned_cols=133 Identities=16% Similarity=0.068 Sum_probs=112.9
Q ss_pred ccccchHHHHHHcCC-cHHHHHHHHHc-CCCCcccc-CCCCchHHHHHHc---CCHHHHHHHHHCCCCCccccCCCCcHH
Q 003097 465 PEAKDSFFELTLKSK-LKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWTAL 538 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~-l~e~L~~~L~~-Ga~in~~D-~~G~T~LH~Aa~~---G~~~~v~~LL~~Ga~in~~D~~G~TpL 538 (848)
..+.+||+.++..+. ..+ +++.|++ |+++|..+ ..|.||||+|+.. ++.+++++|+++|+++|.+|..|.|||
T Consensus 49 ~~g~TpLh~a~~~~~~~~e-iv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpL 127 (209)
T PHA02859 49 DLYETPIFSCLEKDKVNVE-ILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLL 127 (209)
T ss_pred ccCCCHHHHHHHcCCCCHH-HHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 457788888877552 234 5555555 99999987 5899999998764 479999999999999999999999999
Q ss_pred HHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH-HHHcCChHHHHHHHhhhhhhccccc
Q 003097 539 HWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADI-ASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 539 h~Aa~--~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~l-A~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
|+|+. .++.+++++|+++|++++. +|..|.||||. |+..++.+++++|+++|++.+..+.
T Consensus 128 h~a~~~~~~~~~iv~~Li~~gadin~------~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~ 190 (209)
T PHA02859 128 HMYMCNFNVRINVIKLLIDSGVSFLN------KDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNK 190 (209)
T ss_pred HHHHHhccCCHHHHHHHHHcCCCccc------ccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Confidence 99976 4789999999999999998 88999999996 5668899999999999998876654
No 11
>PHA02741 hypothetical protein; Provisional
Probab=99.71 E-value=1.1e-16 Score=160.68 Aligned_cols=127 Identities=20% Similarity=0.165 Sum_probs=112.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHH---H----cCCCCccccCCCCchHHHHHHcCC----HHHHHHHHHCCCCCccccC-
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERV---V----EGSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDK- 532 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L---~----~Ga~in~~D~~G~T~LH~Aa~~G~----~~~v~~LL~~Ga~in~~D~- 532 (848)
..+.++||.++..++.. +++.| . .|++++.+|..|+||||+|+..|+ .+++++|+..|+++|.+|.
T Consensus 19 ~~g~t~Lh~Aa~~g~~~--~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 19 SEGENFFHEAARCGCFD--IIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred cCCCCHHHHHHHcCCHH--HHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 35788999999988875 33333 1 268899999999999999999998 5889999999999999985
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003097 533 YGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 533 ~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~ 599 (848)
.|+||||+|+..++.+++++|+. .|++++. +|..|.||||+|...|+.+++++|++.++..
T Consensus 97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~------~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHF------CNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc------CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999997 5999988 8899999999999999999999999988764
No 12
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.70 E-value=4.5e-16 Score=192.46 Aligned_cols=131 Identities=18% Similarity=0.200 Sum_probs=104.0
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCC
Q 003097 467 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 546 (848)
Q Consensus 467 ~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~ 546 (848)
...+++.||..++.. .+..++..|+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+
T Consensus 525 ~~~~L~~Aa~~g~~~-~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~ 603 (823)
T PLN03192 525 MASNLLTVASTGNAA-LLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH 603 (823)
T ss_pred chhHHHHHHHcCCHH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 456678887777654 2333344488888888888888888888888888888888888888888888888886665555
Q ss_pred HH-------------------------------HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003097 547 EK-------------------------------MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 547 ~e-------------------------------iv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~ 595 (848)
.+ +++.|+++|+++|. +|..|.||||+|+..|+.+++++|+++
T Consensus 604 ~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~------~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 677 (823)
T PLN03192 604 HKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDS------EDHQGATALQVAMAEDHVDMVRLLIMN 677 (823)
T ss_pred HHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence 54 55556667777766 899999999999999999999999999
Q ss_pred hhhhccccc
Q 003097 596 ALVAQFNDM 604 (848)
Q Consensus 596 Ga~~~~~~~ 604 (848)
|++.+..+.
T Consensus 678 GAdv~~~~~ 686 (823)
T PLN03192 678 GADVDKANT 686 (823)
T ss_pred CCCCCCCCC
Confidence 999877654
No 13
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.70 E-value=7.5e-17 Score=159.07 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=109.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHH-Hc---CCCCccccCCCCchHHHHHHcCCH---HHHHHHHHCCCCCcccc-CCCCcH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERV-VE---GSKTTEYDVHGQGVIHLCAMLGYT---WAILLFSWSGLSLDFRD-KYGWTA 537 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L-~~---Ga~in~~D~~G~T~LH~Aa~~G~~---~~v~~LL~~Ga~in~~D-~~G~Tp 537 (848)
.+.++||.|+..++..+.+...- .. +..++..|..|+||||+|+..|+. +++++|+..|+++|.+| ..|+||
T Consensus 16 ~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~ 95 (154)
T PHA02736 16 EGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTP 95 (154)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcH
Confidence 47899999999998654333211 11 112345789999999999999986 46889999999999998 499999
Q ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003097 538 LHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~ 600 (848)
||+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|++.|++.+
T Consensus 96 Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 96 LHIAVYTQNYELATWLCNQPGVNMEI------LNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHhCCHHHHHHHHhCCCCCCcc------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999998 5999988 88999999999999999999999999998864
No 14
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.70 E-value=1.9e-16 Score=180.95 Aligned_cols=129 Identities=19% Similarity=0.206 Sum_probs=104.9
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.+||+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 101 ~g~tpL~~A~~~~~~~--iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~ 178 (413)
T PHA02875 101 DGMTPLHLATILKKLD--IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAK 178 (413)
T ss_pred CCCCHHHHHHHhCCHH--HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Confidence 4667888888777665 4555554 888888888888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCC-CCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003097 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G-~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~ 602 (848)
|+.+++++|+++|++++. .+..| .||+|+|+..|+.+++++|+++|++.+..
T Consensus 179 g~~eiv~~Ll~~ga~~n~------~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 179 GDIAICKMLLDSGANIDY------FGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred CCHHHHHHHHhCCCCCCc------CCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 888888888888888887 45555 47888888888888888888888887654
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2e-16 Score=180.86 Aligned_cols=147 Identities=17% Similarity=0.208 Sum_probs=124.7
Q ss_pred HHHHHHhCCCCC----CcccccchHHHHHHcCCcHHHHHHHHHc-CCCCc-cccCCCCchHHHHHHcCCHHHHHHHHHCC
Q 003097 451 AYLFKSVGDKRT----SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTT-EYDVHGQGVIHLCAMLGYTWAILLFSWSG 524 (848)
Q Consensus 451 ~~l~~~l~~~~~----~~~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in-~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G 524 (848)
.++++.+...+. ....+.++|+.|+..++.. +++.|+. |++++ ..+..|.||||+|+..|+.+++++|+++|
T Consensus 48 ~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g 125 (413)
T PHA02875 48 SEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK--AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG 125 (413)
T ss_pred HHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH--HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 344555433332 2345678999999888876 4444544 77664 46778999999999999999999999999
Q ss_pred CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003097 525 LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 525 a~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
++++.+|..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 126 ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~ 199 (413)
T PHA02875 126 ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI------EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGK 199 (413)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCC
Confidence 99999999999999999999999999999999999988 889999999999999999999999999999987654
Q ss_pred c
Q 003097 605 T 605 (848)
Q Consensus 605 ~ 605 (848)
.
T Consensus 200 ~ 200 (413)
T PHA02875 200 N 200 (413)
T ss_pred C
Confidence 3
No 16
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.68 E-value=4.5e-16 Score=179.20 Aligned_cols=139 Identities=20% Similarity=0.134 Sum_probs=110.4
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003097 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+
T Consensus 121 ~~~g~T~Lh~A~~~~~~~--~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~ 198 (434)
T PHA02874 121 DAELKTFLHYAIKKGDLE--SIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAA 198 (434)
T ss_pred CCCCccHHHHHHHCCCHH--HHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 345678888888877765 4444444 8999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCC-------------------------CCCCCCCCCCCCHHHHHHHcC-ChHHHHHHHhhh
Q 003097 543 YYGREKMVVDLLSAGAKPNLV-------------------------TDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQA 596 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~-------------------------td~~~~d~~G~TpL~lA~~~G-~~~iv~~Ll~~G 596 (848)
..|+.+++++|++.|++++.. .+++.+|..|.||||+|+..+ +.+++++|+++|
T Consensus 199 ~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~g 278 (434)
T PHA02874 199 EYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHK 278 (434)
T ss_pred HcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCc
Confidence 999999999999999887653 134556777777777777654 667777777777
Q ss_pred hhhccccc
Q 003097 597 LVAQFNDM 604 (848)
Q Consensus 597 a~~~~~~~ 604 (848)
++.+..+.
T Consensus 279 ad~n~~d~ 286 (434)
T PHA02874 279 ADISIKDN 286 (434)
T ss_pred CCCCCCCC
Confidence 77666554
No 17
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.68 E-value=3.7e-16 Score=182.12 Aligned_cols=144 Identities=19% Similarity=0.106 Sum_probs=121.9
Q ss_pred HHHHhCCCCCC----ccc-ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCC
Q 003097 453 LFKSVGDKRTS----LPE-AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS 526 (848)
Q Consensus 453 l~~~l~~~~~~----~~~-~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~ 526 (848)
+++.+...+.+ ... +.+|||.|+..++.. +++.|+. |++++..|..|.||||+|+..|+.+++++|+..|++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~--iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~ 226 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQR--LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS 226 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 45555444333 233 788999999888765 5555555 999999999999999999999999999999999999
Q ss_pred CccccCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003097 527 LDFRDKYGWTALHWAAYY-GREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 527 in~~D~~G~TpLh~Aa~~-G~~eiv~~LL~~GA~in~~td~~~~d~-~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
++.+|..|.||||+|+.. ++.+++++|+++|++++. ++. .|.||||+| .++.+++++|+++|++++..+.
T Consensus 227 in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~------~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~ 298 (477)
T PHA02878 227 TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA------KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNS 298 (477)
T ss_pred CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc------cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCC
Confidence 999999999999999976 799999999999999998 554 799999999 5788999999999999877665
Q ss_pred cc
Q 003097 605 TL 606 (848)
Q Consensus 605 ~l 606 (848)
..
T Consensus 299 ~g 300 (477)
T PHA02878 299 YK 300 (477)
T ss_pred CC
Confidence 33
No 18
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.67 E-value=7.3e-16 Score=179.62 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=105.5
Q ss_pred HHHHHHc-CCCCccccCC-CCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003097 484 LLERVVE-GSKTTEYDVH-GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPN 561 (848)
Q Consensus 484 L~~~L~~-Ga~in~~D~~-G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in 561 (848)
+++.|++ |++++..|.. |.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 3444444 9999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHc-CChHHHHHHHhhhhhhcccc
Q 003097 562 LVTDPTSQNPGGLNAADIASKK-GFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 562 ~~td~~~~d~~G~TpL~lA~~~-G~~~iv~~Ll~~Ga~~~~~~ 603 (848)
. +|..|.||||+|+.. ++.+++++|+++|++++..+
T Consensus 229 ~------~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~ 265 (477)
T PHA02878 229 A------RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS 265 (477)
T ss_pred C------CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence 8 889999999999976 78999999999999987654
No 19
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.66 E-value=1.3e-15 Score=177.24 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=120.4
Q ss_pred CCHHHHHHHhCCCCCC----cccccchHHHHHHcCC-cHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHH
Q 003097 448 NSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSK-LKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 521 (848)
Q Consensus 448 ~~~~~l~~~l~~~~~~----~~~~~~~Ll~aa~~~~-l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL 521 (848)
.+..++++.+...+.+ ...+.++++.|+..+. ..+ +++.|++ |++++..|..|.||||+|+..|+.+++++|+
T Consensus 118 ~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~-iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll 196 (480)
T PHA03100 118 SNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK-ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLL 196 (480)
T ss_pred cChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH-HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHH
Confidence 4445566665444433 3456677888777772 333 4444444 9999998889999999999999999999999
Q ss_pred HCCCCCccccCCC------CcHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003097 522 WSGLSLDFRDKYG------WTALHWAAYYGR--EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 522 ~~Ga~in~~D~~G------~TpLh~Aa~~G~--~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll 593 (848)
++|++++..+..| .||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..|+.+++++|+
T Consensus 197 ~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~------~d~~g~TpL~~A~~~~~~~iv~~Ll 270 (480)
T PHA03100 197 DNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI------KDVYGFTPLHYAVYNNNPEFVKYLL 270 (480)
T ss_pred HcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999888888 889999999999 9999999999999888 7889999999999999999999999
Q ss_pred hhhhhhcccccc
Q 003097 594 EQALVAQFNDMT 605 (848)
Q Consensus 594 ~~Ga~~~~~~~~ 605 (848)
++|++++..+..
T Consensus 271 ~~gad~n~~d~~ 282 (480)
T PHA03100 271 DLGANPNLVNKY 282 (480)
T ss_pred HcCCCCCccCCC
Confidence 999987766543
No 20
>PHA02795 ankyrin-like protein; Provisional
Probab=99.66 E-value=9.8e-16 Score=172.52 Aligned_cols=184 Identities=17% Similarity=0.078 Sum_probs=136.5
Q ss_pred HHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHHHHHHHhCCCCCCc--ccccchHHHHHHcCCcHHHHH
Q 003097 408 MRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKRTSL--PEAKDSFFELTLKSKLKEWLL 485 (848)
Q Consensus 408 ~Rl~~LL~~~~~~l~il~~k~~~~~l~e~~~~~~~i~~~~~~~~~l~~~l~~~~~~~--~~~~~~Ll~aa~~~~l~e~L~ 485 (848)
.+++++|.+......+.+.-...... .............+..++++.|.+.+.+. .+..+++|.++..++.. ++
T Consensus 90 k~~~~~l~s~~~~~~~~~~~~~~~~~--~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~e--IV 165 (437)
T PHA02795 90 KDIISALVSKNYMEDIFSIIIKNCNS--VQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESS--VV 165 (437)
T ss_pred HHHHHHHHhcccccchhhhhhhcccc--ccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHH--HH
Confidence 46777887776664433221111100 11111111122346677888886666654 24467888888777655 66
Q ss_pred HHHHc-CCCCcc-c-----cCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 003097 486 ERVVE-GSKTTE-Y-----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGA 558 (848)
Q Consensus 486 ~~L~~-Ga~in~-~-----D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA 558 (848)
+.|+. |++.+. . +..|.|++|.|+..++.+++++|+.+|+++|.+|..|.||||+|+..|+.+++++|+++||
T Consensus 166 k~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GA 245 (437)
T PHA02795 166 EFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGA 245 (437)
T ss_pred HHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 66666 874332 2 2348899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcC--------ChHHHHHHHhhhhhhcc
Q 003097 559 KPNLVTDPTSQNPGGLNAADIASKKG--------FDGLAAFLSEQALVAQF 601 (848)
Q Consensus 559 ~in~~td~~~~d~~G~TpL~lA~~~G--------~~~iv~~Ll~~Ga~~~~ 601 (848)
+++. +|..|.||||+|+..| |.+++++|+++|++.+.
T Consensus 246 dIN~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 246 NVNA------VMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred CCCC------cCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence 9999 8899999999999998 46999999999987654
No 21
>PHA02798 ankyrin-like protein; Provisional
Probab=99.66 E-value=7.4e-16 Score=180.14 Aligned_cols=157 Identities=15% Similarity=0.094 Sum_probs=122.8
Q ss_pred HHHHHHhCCCCCC----cccccchHHHHHHcCC--cHHHHHHHHHcCCCCccccCCCCchHHHHHHcCC---HHHHHHHH
Q 003097 451 AYLFKSVGDKRTS----LPEAKDSFFELTLKSK--LKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY---TWAILLFS 521 (848)
Q Consensus 451 ~~l~~~l~~~~~~----~~~~~~~Ll~aa~~~~--l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~---~~~v~~LL 521 (848)
.++++.+...+.+ ...+.+|||.++..+. ..+.+..++..|++++..|..|.||||+|+..|+ .+++++|+
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll 168 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLL 168 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHH
Confidence 4566666555443 3457788888877653 3443333334499999999999999999999887 89999999
Q ss_pred HCCCCCcccc-CCCCcHHHHHHHc----CCHHHHHHHHHcCCCCCCCC--------------------------------
Q 003097 522 WSGLSLDFRD-KYGWTALHWAAYY----GREKMVVDLLSAGAKPNLVT-------------------------------- 564 (848)
Q Consensus 522 ~~Ga~in~~D-~~G~TpLh~Aa~~----G~~eiv~~LL~~GA~in~~t-------------------------------- 564 (848)
+.|++++..+ ..|.||||.++.. ++.+++++|+++|++++...
T Consensus 169 ~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~ 248 (489)
T PHA02798 169 EKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY 248 (489)
T ss_pred HhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhc
Confidence 9999998875 4688999988764 47899999999998876521
Q ss_pred -CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccccc
Q 003097 565 -DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 565 -d~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l~ 607 (848)
|++.+|..|.||||+|+..|+.+++++|+++|++++..+....
T Consensus 249 ~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~ 292 (489)
T PHA02798 249 IDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGN 292 (489)
T ss_pred CCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCC
Confidence 5677899999999999999999999999999999887765443
No 22
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.65 E-value=1.5e-15 Score=174.94 Aligned_cols=107 Identities=18% Similarity=0.135 Sum_probs=101.6
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003097 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++. .|
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~------~~ 187 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV------KD 187 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC------CC
Confidence 778888999999999999999999999999999999999999999999999999999999999999999988 78
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003097 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~ 603 (848)
..|.||||+|+..|+.+++++|++.|++....+
T Consensus 188 ~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~ 220 (434)
T PHA02874 188 NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKC 220 (434)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCC
Confidence 999999999999999999999999998865544
No 23
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.7e-15 Score=164.33 Aligned_cols=121 Identities=16% Similarity=0.091 Sum_probs=105.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCcccc----CCCCchHHHHHHcCCHHHHHHHHHCCCCCccc-cCCCCcHHH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD----VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALH 539 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D----~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~-D~~G~TpLh 539 (848)
.+.++++++|...+..+ +++.|++ |+++|..+ ..|.||||+|+..|+.+++++|+.+|+++|.+ +..|.||||
T Consensus 31 ~~~~~lL~~A~~~~~~e-ivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh 109 (300)
T PHA02884 31 ICIANILYSSIKFHYTD-IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLY 109 (300)
T ss_pred CCCCHHHHHHHHcCCHH-HHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHH
Confidence 46677777777765555 4445544 99999974 58999999999999999999999999999986 468999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003097 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll 593 (848)
+|+..|+.+++++|+.+|++++. +|..|.||||+|+..++..++.++.
T Consensus 110 ~Aa~~~~~eivklLL~~GAdin~------kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 110 ISVLHGCLKCLEILLSYGADINI------QTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHhCChhHHHHhc
Confidence 99999999999999999999998 8899999999999999998876664
No 24
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.4e-15 Score=157.97 Aligned_cols=130 Identities=12% Similarity=0.132 Sum_probs=110.6
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcC--CHHHHHHHHHCCCCCcccc-CCCCcHHHHHH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGLSLDFRD-KYGWTALHWAA 542 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G--~~~~v~~LL~~Ga~in~~D-~~G~TpLh~Aa 542 (848)
...+||+.|+..++.. +++.|+. .++..|..|.||||+|+..+ +.+++++|++.|+++|.++ ..|+||||+|+
T Consensus 20 ~~~~pL~~A~~~~~~~--~vk~Li~--~~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~ 95 (209)
T PHA02859 20 RYCNPLFYYVEKDDIE--GVKKWIK--FVNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYL 95 (209)
T ss_pred ccCcHHHHHHHhCcHH--HHHHHHH--hhhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHH
Confidence 3567899998888876 4444444 25678899999999999865 8999999999999999997 48999999988
Q ss_pred Hc---CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH--cCChHHHHHHHhhhhhhcccccc
Q 003097 543 YY---GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 543 ~~---G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~--~G~~~iv~~Ll~~Ga~~~~~~~~ 605 (848)
.. ++.+++++|+++|++++. +|..|.||||+|+. .++.+++++|+++|++.+..+..
T Consensus 96 ~~~~~~~~eiv~~Ll~~gadin~------~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~ 157 (209)
T PHA02859 96 SFNKNVEPEILKILIDSGSSITE------EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFD 157 (209)
T ss_pred HhCccccHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCC
Confidence 64 579999999999999998 88999999999876 47899999999999998776543
No 25
>PHA03095 ankyrin-like protein; Provisional
Probab=99.64 E-value=1.5e-15 Score=176.23 Aligned_cols=131 Identities=18% Similarity=0.246 Sum_probs=113.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCH--HHHHHHHHCCCCCccccCCCCcHHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYT--WAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~--~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
..+.++++.++.......-+++.|+. |++++..|..|.||||+||..|.. .++..|+..|+++|.+|..|+||||+|
T Consensus 185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A 264 (471)
T PHA03095 185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYA 264 (471)
T ss_pred CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 44677888877654322224444444 999999999999999999999974 578899999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcc
Q 003097 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~ 601 (848)
+..|+.+++++|++.||+++. +|..|.||||+|+..|+.+++++|++++++...
T Consensus 265 ~~~~~~~~v~~LL~~gad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~ 318 (471)
T PHA03095 265 AVFNNPRACRRLIALGADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNPSAET 318 (471)
T ss_pred HHcCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHH
Confidence 999999999999999999998 889999999999999999999999999987654
No 26
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.64 E-value=1.9e-15 Score=180.86 Aligned_cols=134 Identities=14% Similarity=0.082 Sum_probs=112.6
Q ss_pred ccccchHHHHHHcCCc-HHHHHHHHHc-CCCCccccCCCCchHHHH----------------------------------
Q 003097 465 PEAKDSFFELTLKSKL-KEWLLERVVE-GSKTTEYDVHGQGVIHLC---------------------------------- 508 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l-~e~L~~~L~~-Ga~in~~D~~G~T~LH~A---------------------------------- 508 (848)
..+.+||+.|+..++. .+ +++.|++ |+++|.+|..|+||||+|
T Consensus 210 ~~G~TPLH~Aa~~g~~~~e-IVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~ 288 (764)
T PHA02716 210 NHLITPLHTYLITGNVCAS-VIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSY 288 (764)
T ss_pred CCCCCHHHHHHHcCCCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHH
Confidence 4578899999988865 34 4555555 999999999999999975
Q ss_pred ---HHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH-
Q 003097 509 ---AMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK- 582 (848)
Q Consensus 509 ---a~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~--~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~- 582 (848)
+..|+.+++++|++.|+++|.+|..|+||||+|+. .++.+++++|++.|++++. +|..|.||||+|+.
T Consensus 289 i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~------kD~~G~TPLH~A~~~ 362 (764)
T PHA02716 289 ITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE------PDNIGNTVLHTYLSM 362 (764)
T ss_pred HHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc------CCCCCCCHHHHHHHh
Confidence 34577889999999999999999999999999865 4689999999999999988 88999999999865
Q ss_pred -------------cCChHHHHHHHhhhhhhcccccc
Q 003097 583 -------------KGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 583 -------------~G~~~iv~~Ll~~Ga~~~~~~~~ 605 (848)
.++.+++++|+++|++++..+..
T Consensus 363 lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~ 398 (764)
T PHA02716 363 LSVVNILDPETDNDIRLDVIQCLISLGADITAVNCL 398 (764)
T ss_pred hhhhccccccccccChHHHHHHHHHCCCCCCCcCCC
Confidence 37889999999999998776643
No 27
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.64 E-value=4.7e-16 Score=169.25 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=119.0
Q ss_pred CCHHHHHHHhCCCCCC----cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHH
Q 003097 448 NSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW 522 (848)
Q Consensus 448 ~~~~~l~~~l~~~~~~----~~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~ 522 (848)
.++.++++.+...+.+ .....+||..||..|++. +++.|.+ |+|++..|..|.|.||+||..|+.+++++|++
T Consensus 94 AGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~le--ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle 171 (615)
T KOG0508|consen 94 AGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLE--IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLE 171 (615)
T ss_pred cCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhH--HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHH
Confidence 5666777777554433 233457899999999887 4444444 99999999999999999999999999999999
Q ss_pred CCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHh
Q 003097 523 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 594 (848)
Q Consensus 523 ~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~ 594 (848)
.|+|+|.++..|.|+||.|+..|+.+++++|+.+|+.+.. |..|.|||..|+..|+.+++.+|+.
T Consensus 172 ~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-------d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 172 QGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-------DGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred hCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee-------cCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999999999999999999999999999999874 6789999999999999999999996
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.64 E-value=3.1e-15 Score=175.11 Aligned_cols=193 Identities=14% Similarity=0.078 Sum_probs=138.2
Q ss_pred HHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHHHHHHHhCCCCCC----cccccchHHHHHHcC--CcH
Q 003097 408 MRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKS--KLK 481 (848)
Q Consensus 408 ~Rl~~LL~~~~~~l~il~~k~~~~~l~e~~~~~~~i~~~~~~~~~l~~~l~~~~~~----~~~~~~~Ll~aa~~~--~l~ 481 (848)
..++++|...+..++..+...+| +.-+.. .. .....+..++++.+...+.+ ...+.+||+.++..+ +..
T Consensus 50 ~~iv~~Ll~~GAdvn~~~~~~tp--L~~a~~--~~-~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~ 124 (494)
T PHA02989 50 IKIVKLLIDNGADVNYKGYIETP--LCAVLR--NR-EITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNC 124 (494)
T ss_pred hHHHHHHHHcCCCccCCCCCCCc--HHHHHh--cc-CcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcH
Confidence 46777777666665543322111 111100 00 00113344566666554433 345678888776553 223
Q ss_pred HHHHHHHHc-CCCC-ccccCCCCchHHHHHHc--CCHHHHHHHHHCCCCCcc-ccCCCCcHHHHHHHc----CCHHHHHH
Q 003097 482 EWLLERVVE-GSKT-TEYDVHGQGVIHLCAML--GYTWAILLFSWSGLSLDF-RDKYGWTALHWAAYY----GREKMVVD 552 (848)
Q Consensus 482 e~L~~~L~~-Ga~i-n~~D~~G~T~LH~Aa~~--G~~~~v~~LL~~Ga~in~-~D~~G~TpLh~Aa~~----G~~eiv~~ 552 (848)
+ +++.|++ |+++ +..|..|.||||+|+.. ++.+++++|+++|++++. .+..|.||||+|+.. ++.+++++
T Consensus 125 e-iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~ 203 (494)
T PHA02989 125 D-MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKY 203 (494)
T ss_pred H-HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHH
Confidence 4 4555555 9999 78999999999998754 688999999999999998 688999999999776 48999999
Q ss_pred HHHcCCCCCCCC--------------------------------CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003097 553 LLSAGAKPNLVT--------------------------------DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 553 LL~~GA~in~~t--------------------------------d~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~ 600 (848)
|++.|++++..+ |++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 204 Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin 283 (494)
T PHA02989 204 LIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIY 283 (494)
T ss_pred HHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcc
Confidence 999999987643 356788999999999999999999999999999988
Q ss_pred cccccc
Q 003097 601 FNDMTL 606 (848)
Q Consensus 601 ~~~~~l 606 (848)
..+...
T Consensus 284 ~~d~~G 289 (494)
T PHA02989 284 NVSKDG 289 (494)
T ss_pred ccCCCC
Confidence 776433
No 29
>PHA02946 ankyin-like protein; Provisional
Probab=99.63 E-value=4e-15 Score=171.57 Aligned_cols=130 Identities=12% Similarity=0.094 Sum_probs=80.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC--HHHHHHHHHCCCCCcc-ccCCCCcHHHHH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAILLFSWSGLSLDF-RDKYGWTALHWA 541 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~--~~~v~~LL~~Ga~in~-~D~~G~TpLh~A 541 (848)
.+.+|||.|+..++.. +++.|++ |+++|.+|..|.||||+|+..+. .+++++|+++|++++. .|..|.|||| |
T Consensus 71 ~G~TpLh~Aa~~g~~e--iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-a 147 (446)
T PHA02946 71 DGNYPLHIASKINNNR--IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-A 147 (446)
T ss_pred CCCCHHHHHHHcCCHH--HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-H
Confidence 4556666666655543 3344433 66666666666666666665442 5566666666666663 4666666665 4
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC--hHHHHHHHhhhhhhccccc
Q 003097 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGF--DGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~--~~iv~~Ll~~Ga~~~~~~~ 604 (848)
|..|+.+++++|++.|++++. +|..|.||||+|+..++ .+++++|+++|++++..+.
T Consensus 148 a~~~~~~vv~~Ll~~gad~~~------~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~ 206 (446)
T PHA02946 148 CTDPSERVFKKIMSIGFEARI------VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDH 206 (446)
T ss_pred HHCCChHHHHHHHhccccccc------cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCC
Confidence 455666666666666666665 66777777777665433 4677777777777665543
No 30
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.63 E-value=2.6e-15 Score=174.83 Aligned_cols=149 Identities=16% Similarity=0.149 Sum_probs=126.6
Q ss_pred CCCHHHHHHHhCCCCCC----cccccchHHH-----HHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHH--HcCCH
Q 003097 447 SNSWAYLFKSVGDKRTS----LPEAKDSFFE-----LTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCA--MLGYT 514 (848)
Q Consensus 447 ~~~~~~l~~~l~~~~~~----~~~~~~~Ll~-----aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa--~~G~~ 514 (848)
..+..++++.+.+.+.+ ...+.++++. ++..++.. +++.|++ |++++..|..|.||||+|+ ..|+.
T Consensus 44 ~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~--iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~ 121 (480)
T PHA03100 44 EARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKE--IVKLLLEYGANVNAPDNNGITPLLYAISKKSNSY 121 (480)
T ss_pred ccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHH--HHHHHHHCCCCCCCCCCCCCchhhHHHhcccChH
Confidence 34445566666555443 2335577777 77666654 4555555 9999999999999999999 99999
Q ss_pred HHHHHHHHCCCCCccccCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHH
Q 003097 515 WAILLFSWSGLSLDFRDKYGWTALHWAAYYG--REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFL 592 (848)
Q Consensus 515 ~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G--~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~L 592 (848)
+++++|+++|++++..|..|.||||+|+..| +.+++++|+++|++++. +|..|.||||+|+..|+.+++++|
T Consensus 122 ~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~------~d~~g~tpL~~A~~~~~~~iv~~L 195 (480)
T PHA03100 122 SIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA------KNRYGYTPLHIAVEKGNIDVIKFL 195 (480)
T ss_pred HHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc------ccCCCCCHHHHHHHhCCHHHHHHH
Confidence 9999999999999999999999999999999 99999999999999998 778999999999999999999999
Q ss_pred Hhhhhhhcccc
Q 003097 593 SEQALVAQFND 603 (848)
Q Consensus 593 l~~Ga~~~~~~ 603 (848)
+++|++++..+
T Consensus 196 l~~ga~~~~~~ 206 (480)
T PHA03100 196 LDNGADINAGD 206 (480)
T ss_pred HHcCCCccCCC
Confidence 99999987654
No 31
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.63 E-value=2.6e-15 Score=179.64 Aligned_cols=151 Identities=15% Similarity=0.042 Sum_probs=120.4
Q ss_pred CCHHHHHHHhCCCC-CC-----cccccchHHHHHHcCCc-HHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC--HHHH
Q 003097 448 NSWAYLFKSVGDKR-TS-----LPEAKDSFFELTLKSKL-KEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAI 517 (848)
Q Consensus 448 ~~~~~l~~~l~~~~-~~-----~~~~~~~Ll~aa~~~~l-~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~--~~~v 517 (848)
+...++++.+.+.+ .+ ...+.++||.++..... .+ +++.|++ |+++|..|..|.||||+|+..|+ .++|
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~e-IVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV 230 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDID-ILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI 230 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence 34456666665555 32 23466778766544322 23 5555555 99999999999999999999995 5899
Q ss_pred HHHHHCCCCCccccCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHHcCCCC
Q 003097 518 LLFSWSGLSLDFRDKYGWTALHWA-------------------------------------AYYGREKMVVDLLSAGAKP 560 (848)
Q Consensus 518 ~~LL~~Ga~in~~D~~G~TpLh~A-------------------------------------a~~G~~eiv~~LL~~GA~i 560 (848)
++|+++|+++|.+|..|+||||+| +..|+.+++++|++.|+++
T Consensus 231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI 310 (764)
T PHA02716 231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL 310 (764)
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce
Confidence 999999999999999999999975 3457889999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHH--cCChHHHHHHHhhhhhhcccccc
Q 003097 561 NLVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 561 n~~td~~~~d~~G~TpL~lA~~--~G~~~iv~~Ll~~Ga~~~~~~~~ 605 (848)
+. +|..|.||||+|+. .++.+++++|+++|++.+..+..
T Consensus 311 N~------kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~ 351 (764)
T PHA02716 311 HY------KDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNI 351 (764)
T ss_pred ec------cCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCC
Confidence 88 88999999999764 46889999999999998776643
No 32
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.62 E-value=8.6e-16 Score=167.24 Aligned_cols=129 Identities=15% Similarity=0.211 Sum_probs=114.9
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003097 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 467 ~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
+-.|+.-|+..|++. +++.|+. |+++|.......|||-.||.-|+.++|++|+++|+|++..|..|.|.||+||..|
T Consensus 84 gappLWaAsaAGHl~--vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykG 161 (615)
T KOG0508|consen 84 GAPPLWAASAAGHLE--VVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKG 161 (615)
T ss_pred CCchhhHHhccCcHH--HHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccC
Confidence 334555555666665 5555555 9999998888899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003097 546 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 546 ~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~ 603 (848)
|.+|+++|++.|||+|. ++..|.|+||.|+..|+.+|+++|+++|+......
T Consensus 162 h~~I~qyLle~gADvn~------ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~ 213 (615)
T KOG0508|consen 162 HVDIAQYLLEQGADVNA------KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG 213 (615)
T ss_pred chHHHHHHHHhCCCcch------hcccCchHHHhhhhcccHHHHHHHHhCCceeeecC
Confidence 99999999999999999 88999999999999999999999999998765443
No 33
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.61 E-value=2.1e-15 Score=145.25 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=104.8
Q ss_pred hHHHHHHcCCcHHHHHHHHHcC-CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003097 470 SFFELTLKSKLKEWLLERVVEG-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~Ll~aa~~~~l~e~L~~~L~~G-a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
-++.++.++.+.+ +..+|... -.+|.+|.+|.||||-|+.+|+.++|..|+..|++++.+...||||||-||..++.+
T Consensus 66 l~lwaae~nrl~e-V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTE-VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHH-HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence 4677778887774 45555554 458999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCh-HHHHHHHh-hhhhhccc
Q 003097 549 MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD-GLAAFLSE-QALVAQFN 602 (848)
Q Consensus 549 iv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~-~iv~~Ll~-~Ga~~~~~ 602 (848)
|+.+||++|||+|+ ......||||+|+...+. ..+.+|+. .++.+..+
T Consensus 145 va~~LLqhgaDVnA------~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~ 194 (228)
T KOG0512|consen 145 VAGRLLQHGADVNA------QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLK 194 (228)
T ss_pred HHHHHHhccCcccc------cccccchhhHHhhcccchHHHHHHHhhccccChhhh
Confidence 99999999999999 447789999999987654 44555543 45554433
No 34
>PHA02946 ankyin-like protein; Provisional
Probab=99.61 E-value=6e-15 Score=170.17 Aligned_cols=148 Identities=14% Similarity=0.141 Sum_probs=104.8
Q ss_pred CHHHHHHHhCCCCCC----cccccchHHHHHHcCC-cHHHHHHHHHc-CCCCcc-ccCCCCchHHHHHHcCCHHHHHHHH
Q 003097 449 SWAYLFKSVGDKRTS----LPEAKDSFFELTLKSK-LKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFS 521 (848)
Q Consensus 449 ~~~~l~~~l~~~~~~----~~~~~~~Ll~aa~~~~-l~e~L~~~L~~-Ga~in~-~D~~G~T~LH~Aa~~G~~~~v~~LL 521 (848)
+..++++.|...+.+ ...+.+||+.++..+. ..+ ++++|+. |+++|. .|..|.|||| ||..|+.+++++|+
T Consensus 83 g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e-~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll 160 (446)
T PHA02946 83 NNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIE-RINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIM 160 (446)
T ss_pred CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHH-HHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHH
Confidence 345555555443322 3456778887765543 223 3444444 888885 6788888887 56668888888888
Q ss_pred HCCCCCccccCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC--ChHHHHHHHhhhh
Q 003097 522 WSGLSLDFRDKYGWTALHWAAYYG--REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQAL 597 (848)
Q Consensus 522 ~~Ga~in~~D~~G~TpLh~Aa~~G--~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G--~~~iv~~Ll~~Ga 597 (848)
+.|++++.+|..|+||||+|+..+ +.+++++|++.|++++. +|..|.||||+|+..| +.+++++|++ |+
T Consensus 161 ~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~------~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga 233 (446)
T PHA02946 161 SIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK------PDHDGNTPLHIVCSKTVKNVDIINLLLP-ST 233 (446)
T ss_pred hccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCCCcHHHHHHHHc-CC
Confidence 888888888888888888887654 46788888888888887 7788888888888875 6778888875 77
Q ss_pred hhcccccc
Q 003097 598 VAQFNDMT 605 (848)
Q Consensus 598 ~~~~~~~~ 605 (848)
+.+..+..
T Consensus 234 din~~d~~ 241 (446)
T PHA02946 234 DVNKQNKF 241 (446)
T ss_pred CCCCCCCC
Confidence 76665543
No 35
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.61 E-value=8.9e-15 Score=171.30 Aligned_cols=126 Identities=14% Similarity=0.085 Sum_probs=92.7
Q ss_pred cccchHHHHHHcCC-cHHHHHHHHHc-CCCCcc-ccCCCCchHHHHHHcC----CHHHHHHHHHCCCC------------
Q 003097 466 EAKDSFFELTLKSK-LKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLG----YTWAILLFSWSGLS------------ 526 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~-l~e~L~~~L~~-Ga~in~-~D~~G~T~LH~Aa~~G----~~~~v~~LL~~Ga~------------ 526 (848)
.+.+||+.++.... ..+ +++.|++ |++++. .+..|.||||+|+..+ +.+++++|+++|++
T Consensus 144 ~g~tpLh~a~~~~~~~~~-iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l 222 (494)
T PHA02989 144 RGYNLLHMYLESFSVKKD-VIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVL 222 (494)
T ss_pred CCCCHHHHHHHhccCCHH-HHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHH
Confidence 34556655544322 122 3333333 666666 4566666666665543 56666666666655
Q ss_pred --------------------------CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003097 527 --------------------------LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 580 (848)
Q Consensus 527 --------------------------in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA 580 (848)
+|.+|..|+||||+|+..|+.+++++|++.||+++. +|..|.||||+|
T Consensus 223 ~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~------~d~~G~TpL~~A 296 (494)
T PHA02989 223 ESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYN------VSKDGDTVLTYA 296 (494)
T ss_pred HHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccc------cCCCCCCHHHHH
Confidence 455667799999999999999999999999999998 889999999999
Q ss_pred HHcCChHHHHHHHhhhhh
Q 003097 581 SKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 581 ~~~G~~~iv~~Ll~~Ga~ 598 (848)
+..|+.++++.|++.+..
T Consensus 297 ~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 297 IKHGNIDMLNRILQLKPG 314 (494)
T ss_pred HHcCCHHHHHHHHhcCCC
Confidence 999999999999997643
No 36
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.61 E-value=6.7e-15 Score=178.95 Aligned_cols=138 Identities=17% Similarity=0.069 Sum_probs=115.8
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003097 464 LPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 464 ~~~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
...+.++|+.|+..++..+.+..++..|+++|..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 338 d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~ 417 (682)
T PHA02876 338 DRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALC 417 (682)
T ss_pred ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHH
Confidence 34567888888877766554444444499999999999999999999999999999999999999999999999999987
Q ss_pred cCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-ChHHHHHHHhhhhhhcccccccc
Q 003097 544 YGR-EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 544 ~G~-~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G-~~~iv~~Ll~~Ga~~~~~~~~l~ 607 (848)
.++ ..++++|++.|+++|. +|..|.||||+|+..| +.+++++|+++|++.+..+....
T Consensus 418 ~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~ 477 (682)
T PHA02876 418 GTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQ 477 (682)
T ss_pred cCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 655 5678999999999988 8899999999999876 68999999999999887765443
No 37
>PHA03095 ankyrin-like protein; Provisional
Probab=99.60 E-value=9.5e-15 Score=169.59 Aligned_cols=104 Identities=22% Similarity=0.192 Sum_probs=55.5
Q ss_pred CCCCccccCCCCchHHHHHHcC-CHHHHHHHHHCCCCCccccCCCCcHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCC
Q 003097 491 GSKTTEYDVHGQGVIHLCAMLG-YTWAILLFSWSGLSLDFRDKYGWTALHWAA--YYGREKMVVDLLSAGAKPNLVTDPT 567 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G-~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa--~~G~~eiv~~LL~~GA~in~~td~~ 567 (848)
|+++|..|..|.||||+|+..| ..+++++|+++|+++|.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 73 Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~----- 147 (471)
T PHA03095 73 GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA----- 147 (471)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc-----
Confidence 5555555555555555555555 355555555555555555555555555555 33445555555555555554
Q ss_pred CCCCCCCCHHHHHHHcC--ChHHHHHHHhhhhhhc
Q 003097 568 SQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQ 600 (848)
Q Consensus 568 ~~d~~G~TpL~lA~~~G--~~~iv~~Ll~~Ga~~~ 600 (848)
.|..|.||||+|+..+ +.+++++|+++|++..
T Consensus 148 -~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~ 181 (471)
T PHA03095 148 -LDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY 181 (471)
T ss_pred -cCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc
Confidence 4455555555554433 3445555555555443
No 38
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.60 E-value=3.6e-15 Score=181.47 Aligned_cols=244 Identities=17% Similarity=0.189 Sum_probs=166.4
Q ss_pred ceEEEcCCeecceeeeeCCeeeeecCCCCCceeEEEEEeCCCCCcccccccccCCCCCccCCCCccccchhhHHHH----
Q 003097 331 NMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQV---- 406 (848)
Q Consensus 331 ~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~~Sev~~Fey~~~~~~~~~~~~~~~~~~~e~~l---- 406 (848)
.+.|.-|.+++.--+...|...|.-+ .+|..||+++..... -.++..-+....-... -+....+.+++
T Consensus 379 ~la~~~g~~~~v~Lll~~ga~~~~~g--k~gvTplh~aa~~~~--~~~v~l~l~~gA~~~~----~~~lG~T~lhvaa~~ 450 (1143)
T KOG4177|consen 379 HLAVKSGRVSVVELLLEAGADPNSAG--KNGVTPLHVAAHYGN--PRVVKLLLKRGASPNA----KAKLGYTPLHVAAKK 450 (1143)
T ss_pred hhhcccCchhHHHhhhhccCCcccCC--CCCcceeeehhhccC--cceEEEEeccCCChhh----HhhcCCChhhhhhhc
Confidence 56677787777776777777533222 689999999885432 2233333322100000 00011222222
Q ss_pred --HHHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHHHHHHHhCCCC----CCcccccchHHHHHHcCCc
Q 003097 407 --QMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKR----TSLPEAKDSFFELTLKSKL 480 (848)
Q Consensus 407 --~~Rl~~LL~~~~~~l~il~~k~~~~~l~e~~~~~~~i~~~~~~~~~l~~~l~~~~----~~~~~~~~~Ll~aa~~~~l 480 (848)
+.+.+.++.......+++... .+...-.....+|.++...+.+.. ++.+.+-++++.+...+..
T Consensus 451 g~~~~~~~~l~~~g~~~n~~s~~----------G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v 520 (1143)
T KOG4177|consen 451 GRYLQIARLLLQYGADPNAVSKQ----------GFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTV 520 (1143)
T ss_pred ccHhhhhhhHhhcCCCcchhccc----------cCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhH
Confidence 334444443333333322111 111111123456666666665543 3344455667766666654
Q ss_pred HHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 003097 481 KEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKP 560 (848)
Q Consensus 481 ~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~i 560 (848)
. .+...+..|++++.++..|.||||.||..|+..+|++||++|++++.+|+.|+||||.||..|+.+|+.+|+++||++
T Consensus 521 ~-~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v 599 (1143)
T KOG4177|consen 521 K-VAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV 599 (1143)
T ss_pred H-HHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC
Confidence 4 244444559999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003097 561 NLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 561 n~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~ 599 (848)
|. .|.+|.|||++|...|+.+++++|...|+++
T Consensus 600 na------~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 600 NA------ADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred Cc------ccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 99 8899999999999999999999999999884
No 39
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.60 E-value=5.1e-15 Score=131.85 Aligned_cols=89 Identities=28% Similarity=0.343 Sum_probs=81.2
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 003097 505 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 584 (848)
Q Consensus 505 LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G 584 (848)
||+|+..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|++.|++++. +|..|.||||+|+..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence 7999999999999999999998887 88999999999999999999999999988 7899999999999999
Q ss_pred ChHHHHHHHhhhhhhcccc
Q 003097 585 FDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 585 ~~~iv~~Ll~~Ga~~~~~~ 603 (848)
+.+++++|+++|++.+.+|
T Consensus 71 ~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 71 NLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHHHHTTT-TTSS-
T ss_pred CHHHHHHHHHcCCCCCCcC
Confidence 9999999999999987654
No 40
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.59 E-value=1.6e-15 Score=151.05 Aligned_cols=107 Identities=21% Similarity=0.100 Sum_probs=97.8
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003097 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
...+|..|+.|.|||.||+.+|+.++|++||..|++++...+...|+|.+|+..|..+||++||.++.|+|. .|
T Consensus 150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv------yD 223 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV------YD 223 (296)
T ss_pred hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce------ec
Confidence 677899999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003097 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~ 603 (848)
.+|.|||-+|+..||.+|++.|++.||++...+
T Consensus 224 wNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~ 256 (296)
T KOG0502|consen 224 WNGGTPLLYAVRGNHVKCVESLLNSGADVTQED 256 (296)
T ss_pred cCCCceeeeeecCChHHHHHHHHhcCCCccccc
Confidence 999999999999999999999999999875543
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=99.59 E-value=6.9e-15 Score=172.03 Aligned_cols=151 Identities=13% Similarity=0.151 Sum_probs=100.4
Q ss_pred CCHHHHHHHhCCCCCCc----ccccchHHHHHHc----CCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcC---CHH
Q 003097 448 NSWAYLFKSVGDKRTSL----PEAKDSFFELTLK----SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG---YTW 515 (848)
Q Consensus 448 ~~~~~l~~~l~~~~~~~----~~~~~~Ll~aa~~----~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G---~~~ 515 (848)
+...++++.+...+.+. ..+.+||+.++.. .+..+ +++.|++ |+++|..|..|.||||+|+..| +.+
T Consensus 48 ~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~-iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~ 126 (489)
T PHA02798 48 SPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLD-IVKILIENGADINKKNSDGETPLYCLLSNGYINNLE 126 (489)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHH-HHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHH
Confidence 33445556554444432 3456677665432 11223 3444444 8888888888888888887765 567
Q ss_pred HHHHHHHCCCCCccccCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC----hHH
Q 003097 516 AILLFSWSGLSLDFRDKYGWTALHWAAYYGR---EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGF----DGL 588 (848)
Q Consensus 516 ~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~---~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~----~~i 588 (848)
++++|+++|++++.+|..|.||||+|+..|+ .+++++|++.|++++.. .+..|.||||.+...+. .++
T Consensus 127 iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~-----~~~~~~t~Lh~~~~~~~~~~~~~i 201 (489)
T PHA02798 127 ILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTH-----NNKEKYDTLHCYFKYNIDRIDADI 201 (489)
T ss_pred HHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccc-----cCcCCCcHHHHHHHhccccCCHHH
Confidence 7888888888888888888888888887776 78888888888877762 13567788887776543 467
Q ss_pred HHHHHhhhhhhccccc
Q 003097 589 AAFLSEQALVAQFNDM 604 (848)
Q Consensus 589 v~~Ll~~Ga~~~~~~~ 604 (848)
+++|+++|++.+..+.
T Consensus 202 vk~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 202 LKLFVDNGFIINKENK 217 (489)
T ss_pred HHHHHHCCCCcccCCc
Confidence 7888888877665443
No 42
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=1.1e-14 Score=167.84 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=118.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHH-CC-CCCccccCCCCcHHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SG-LSLDFRDKYGWTALHWA 541 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~-~G-a~in~~D~~G~TpLh~A 541 (848)
.++-+|||.+|..|+.. .++.|+. |++++.++.++.||||.||..|...+|+-||+ .| ..+|..|-.|.||||+|
T Consensus 271 ~dg~tpLH~a~r~G~~~--svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHla 348 (929)
T KOG0510|consen 271 NDGCTPLHYAARQGGPE--SVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLA 348 (929)
T ss_pred ccCCchHHHHHHcCChh--HHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhh
Confidence 35778999999999877 4555555 99999999999999999999999999999998 55 45788999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003097 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
+..||.+++++||..||...... ..|.+|.||||+|+..|+..++++|+.+|++....+.
T Consensus 349 a~~gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~ 408 (929)
T KOG0510|consen 349 AKSGHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNK 408 (929)
T ss_pred hhcCHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccc
Confidence 99999999999999999987311 2589999999999999999999999999999866543
No 43
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.58 E-value=4e-15 Score=148.28 Aligned_cols=131 Identities=18% Similarity=0.213 Sum_probs=121.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.+||+.|+.+|.+. ++++|++ |++++...+.-.++|.+|+..||.++|++||.+++|+|.-|-+|-|||-+|+.
T Consensus 158 e~GfTpLiWAaa~G~i~--vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvr 235 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIP--VVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVR 235 (296)
T ss_pred ccCchHhHHHHhcCchH--HHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeec
Confidence 34678999999999998 6777776 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003097 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
.||.+|++.||..||+++. .+..|++++++|...|+. +++..+++-+...+.+.
T Consensus 236 gnhvkcve~Ll~sGAd~t~------e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~ 289 (296)
T KOG0502|consen 236 GNHVKCVESLLNSGADVTQ------EDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDS 289 (296)
T ss_pred CChHHHHHHHHhcCCCccc------ccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcc
Confidence 9999999999999999998 778999999999999998 88999998888777664
No 44
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.56 E-value=4.2e-14 Score=172.03 Aligned_cols=129 Identities=18% Similarity=0.186 Sum_probs=72.5
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCC-HHHHHHHHHCCCCCccccCCCCcHHHHHHHc-
Q 003097 467 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY-TWAILLFSWSGLSLDFRDKYGWTALHWAAYY- 544 (848)
Q Consensus 467 ~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~-~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~- 544 (848)
+.++|+.|+..++..+.+..++..|++++..|..|.||||+|+..|+ .+++++|+..|++++..|..|+||||+|+..
T Consensus 273 g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~ 352 (682)
T PHA02876 273 KNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLD 352 (682)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhC
Confidence 45555555555554332222222366666666666666666666553 5556666666666666666666666666553
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcc
Q 003097 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~ 601 (848)
++.+++.+|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+.
T Consensus 353 ~~~~iv~lLl~~gadin~------~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~ 403 (682)
T PHA02876 353 RNKDIVITLLELGANVNA------RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEA 403 (682)
T ss_pred CcHHHHHHHHHcCCCCcc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccc
Confidence 345555556666666555 555566666666666666666666666655543
No 45
>PHA02741 hypothetical protein; Provisional
Probab=99.54 E-value=2.2e-14 Score=143.92 Aligned_cols=105 Identities=24% Similarity=0.261 Sum_probs=93.8
Q ss_pred CccccCCCCchHHHHHHcCCHHHHHHHHH------CCCCCccccCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCCC
Q 003097 494 TTEYDVHGQGVIHLCAMLGYTWAILLFSW------SGLSLDFRDKYGWTALHWAAYYGR----EKMVVDLLSAGAKPNLV 563 (848)
Q Consensus 494 in~~D~~G~T~LH~Aa~~G~~~~v~~LL~------~Ga~in~~D~~G~TpLh~Aa~~G~----~eiv~~LL~~GA~in~~ 563 (848)
++..|..|.||||+||..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|+++|++++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~- 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA- 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence 45678899999999999999999998853 468999999999999999999999 5899999999999988
Q ss_pred CCCCCCCC-CCCCHHHHHHHcCChHHHHHHHh-hhhhhccccc
Q 003097 564 TDPTSQNP-GGLNAADIASKKGFDGLAAFLSE-QALVAQFNDM 604 (848)
Q Consensus 564 td~~~~d~-~G~TpL~lA~~~G~~~iv~~Ll~-~Ga~~~~~~~ 604 (848)
+|. .|.||||+|+..++.+++++|++ .|++.+..+.
T Consensus 93 -----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~ 130 (169)
T PHA02741 93 -----QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA 130 (169)
T ss_pred -----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 674 89999999999999999999998 5888766654
No 46
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.52 E-value=3.6e-14 Score=120.48 Aligned_cols=74 Identities=22% Similarity=0.355 Sum_probs=67.7
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCC-CCCceeEEEEEeCCCCCc
Q 003097 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HSPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pp-h~~G~Vpl~v~~~~~~~~ 375 (848)
.|+.++|+||+++||++|+|+|.+|.+ ++.|+||++.+-.++|++.+|+|.+|| |.||.|+++++.....-|
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~-------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~~ 74 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFC 74 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCC-------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceeec
Confidence 599999999999999999999988865 699999999999999999999999999 799999999999877666
Q ss_pred cc
Q 003097 376 SQ 377 (848)
Q Consensus 376 Se 377 (848)
..
T Consensus 75 ~~ 76 (85)
T cd01175 75 KG 76 (85)
T ss_pred cC
Confidence 43
No 47
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.51 E-value=7e-14 Score=148.49 Aligned_cols=139 Identities=21% Similarity=0.221 Sum_probs=109.6
Q ss_pred HHHHHHhCCCCC-Cc----ccccchHHHHHHcC---CcHHHHHHHHHcCCCCccc-cCCCCchHHHHHHcCCHHHHHHHH
Q 003097 451 AYLFKSVGDKRT-SL----PEAKDSFFELTLKS---KLKEWLLERVVEGSKTTEY-DVHGQGVIHLCAMLGYTWAILLFS 521 (848)
Q Consensus 451 ~~l~~~l~~~~~-~~----~~~~~~Ll~aa~~~---~l~e~L~~~L~~Ga~in~~-D~~G~T~LH~Aa~~G~~~~v~~LL 521 (848)
..+++.|.+.+. +. .-+.++++.+++.. ....-+++.|-.-+|+|.+ ...|+|+|++|+.+|..++|+.||
T Consensus 281 F~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LL 360 (452)
T KOG0514|consen 281 FDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALL 360 (452)
T ss_pred hHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHH
Confidence 345555555542 22 23667777766532 2222356666667788884 456999999999999999999999
Q ss_pred HCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003097 522 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSA-GAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 522 ~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~-GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~ 595 (848)
..|+|||.+|.+|.|+|++||.+||.+||++||.. ++|+.+ .|.+|.|+|.+|...||.+|.-+|..+
T Consensus 361 acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sL------tD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 361 ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISL------TDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccccee------ecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 99999999999999999999999999999999974 677777 789999999999999999998888654
No 48
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.51 E-value=3.1e-14 Score=146.60 Aligned_cols=128 Identities=18% Similarity=0.253 Sum_probs=107.0
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003097 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
.+.+-.+||.+|..|+.. +++.|+. |+.+|..+....||||+||..|+.++|..||++.+|+|..+..|.|||||||
T Consensus 31 ddhgfsplhwaakegh~a--ivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyac 108 (448)
T KOG0195|consen 31 DDHGFSPLHWAAKEGHVA--IVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYAC 108 (448)
T ss_pred cccCcchhhhhhhcccHH--HHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhh
Confidence 345667888888877765 6666666 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003097 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~ 599 (848)
..|...+++-|+.+||.+++ .|+.|.|||+.|.-.-..-+.++-.++|-.+
T Consensus 109 fwgydqiaedli~~ga~v~i------cnk~g~tpldkakp~l~~~l~e~aek~gq~~ 159 (448)
T KOG0195|consen 109 FWGYDQIAEDLISCGAAVNI------CNKKGMTPLDKAKPMLKNTLLEIAEKHGQSP 159 (448)
T ss_pred hhcHHHHHHHHHhccceeee------cccCCCCchhhhchHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998 8899999999886544444444445566544
No 49
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.51 E-value=2.2e-14 Score=147.66 Aligned_cols=110 Identities=24% Similarity=0.172 Sum_probs=103.5
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003097 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
.-|.|.-|..|.+||||||..|+..+++.||.+|+.+|..+....||||+|+.+||.++|..|++..+|+|+ .|
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna------vn 97 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA------VN 97 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch------hh
Confidence 557888899999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003097 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l 606 (848)
..|.||||+||.-|+..|++-|+..||..++-+...
T Consensus 98 ehgntplhyacfwgydqiaedli~~ga~v~icnk~g 133 (448)
T KOG0195|consen 98 EHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKG 133 (448)
T ss_pred ccCCCchhhhhhhcHHHHHHHHHhccceeeecccCC
Confidence 999999999999999999999999999988766543
No 50
>PHA02795 ankyrin-like protein; Provisional
Probab=99.51 E-value=8.5e-14 Score=156.97 Aligned_cols=133 Identities=10% Similarity=-0.023 Sum_probs=111.0
Q ss_pred ccccchHHHHHHcC-CcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccc------cCCCCc
Q 003097 465 PEAKDSFFELTLKS-KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------DKYGWT 536 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~-~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~------D~~G~T 536 (848)
....++||.++..+ +..+ +++.|+. |++++.. .+.||||.|+..|+.+++++|+++|++++.. +..|.|
T Consensus 114 ~~~~~~L~~~~~n~~n~~e-iV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t 190 (437)
T PHA02795 114 NSVQDLLLYYLSNAYVEID-IVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYT 190 (437)
T ss_pred ccccHHHHHHHHhcCCCHH-HHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccc
Confidence 34567788777732 3334 5555555 9999984 4589999999999999999999999854322 245889
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003097 537 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 537 pLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l 606 (848)
|+|.|+..++.+++++|+++||++|. +|..|.||||+|+..|+.+++++|+++|++.+..+...
T Consensus 191 ~l~~a~~~~~~eIve~LIs~GADIN~------kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G 254 (437)
T PHA02795 191 RGFLVDEPTVLEIYKLCIPYIEDINQ------LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNG 254 (437)
T ss_pred hhHHHHhcCHHHHHHHHHhCcCCcCc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 99999999999999999999999998 88999999999999999999999999999998876543
No 51
>PHA02917 ankyrin-like protein; Provisional
Probab=99.51 E-value=1.1e-13 Score=166.25 Aligned_cols=152 Identities=10% Similarity=-0.045 Sum_probs=114.6
Q ss_pred CHHHHHHHhCCCCCC----cccccchHHHHHHcCCcH--HHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHH
Q 003097 449 SWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 521 (848)
Q Consensus 449 ~~~~l~~~l~~~~~~----~~~~~~~Ll~aa~~~~l~--e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL 521 (848)
+..++++.+...+.+ ...+.|||+.++..++.. ..+++.|+. +...|..|. .+++|+|+..|+.++|++|+
T Consensus 46 ~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll 123 (661)
T PHA02917 46 NNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLV 123 (661)
T ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHH
Confidence 445666666444433 345678999999888642 234555554 444454432 37778899999999999999
Q ss_pred HCCCCCccccCCCCcHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC-----------CCHHHHHHH------
Q 003097 522 WSGLSLDFRDKYGWTALHWAA--YYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-----------LNAADIASK------ 582 (848)
Q Consensus 522 ~~Ga~in~~D~~G~TpLh~Aa--~~G~~eiv~~LL~~GA~in~~td~~~~d~~G-----------~TpL~lA~~------ 582 (848)
++|+++|.+|.+|+||||+|+ ..|+.+++++|+++||+++..+. .+..| .||||+|+.
T Consensus 124 ~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~---~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~ 200 (661)
T PHA02917 124 EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE---DDEYGYAYDDYQPRNCGTVLHLYIISHLYSE 200 (661)
T ss_pred HcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc---ccccccccccccccccccHHHHHHhhccccc
Confidence 999999999999999999654 46899999999999999986221 22334 699999986
Q ss_pred -----cCChHHHHHHHhhhhhhcccccc
Q 003097 583 -----KGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 583 -----~G~~~iv~~Ll~~Ga~~~~~~~~ 605 (848)
.++.+++++|+++|++.+..+..
T Consensus 201 ~~~~~~~~~eiv~~Li~~Gadvn~~d~~ 228 (661)
T PHA02917 201 SDTRAYVRPEVVKCLINHGIKPSSIDKN 228 (661)
T ss_pred ccccccCcHHHHHHHHHCCCCcccCCCC
Confidence 56899999999999999887643
No 52
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.51 E-value=6.3e-14 Score=161.58 Aligned_cols=131 Identities=21% Similarity=0.249 Sum_probs=108.6
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHcCCC---------------CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCc
Q 003097 464 LPEAKDSFFELTLKSKLKEWLLERVVEGSK---------------TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD 528 (848)
Q Consensus 464 ~~~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~---------------in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in 528 (848)
.+++.+||+.|+-.++.+ .+...|..|.. +|..|.+|.||||+||..|+.+++..|+..|++|+
T Consensus 222 ~n~~~~pLhlAve~g~~e-~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~ 300 (929)
T KOG0510|consen 222 NNEKATPLHLAVEGGDIE-MLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASIN 300 (929)
T ss_pred cCCCCcchhhhhhcCCHH-HHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccc
Confidence 344566777666555554 45555555332 34468899999999999999999999999999999
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003097 529 FRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 529 ~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~ 600 (848)
.++.++.||||.||.+|+.++|+-||+ .|... .+..|-.|.||||+|+..||..++++|+.+||...
T Consensus 301 ~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rl-----lne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 301 SKNKDEESPLHFAAIYGRINTVERLLQESDTRL-----LNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred ccCCCCCCchHHHHHcccHHHHHHHHhCcCccc-----cccccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence 999999999999999999999999999 44322 23488999999999999999999999999999876
No 53
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=6e-14 Score=171.02 Aligned_cols=140 Identities=20% Similarity=0.249 Sum_probs=121.3
Q ss_pred CCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHH
Q 003097 462 TSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 540 (848)
Q Consensus 462 ~~~~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~ 540 (848)
.....+.++|+.++-.++.. +...+.+ ++..+.....|.|+||+|+..++..++..++.+|++++.++..|+||||.
T Consensus 469 ~~s~~G~T~Lhlaaq~Gh~~--~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~ 546 (1143)
T KOG4177|consen 469 AVSKQGFTPLHLAAQEGHTE--VVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHV 546 (1143)
T ss_pred hhccccCcchhhhhccCCch--HHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHH
Confidence 34566778888887777766 3444444 66777777788888888888888888888889999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccccccc
Q 003097 541 AAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN 609 (848)
Q Consensus 541 Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l~~~ 609 (848)
||.+|+.++|++||++||++++ +++.|+||||.|+..|+.+|+.+|+++||+++..+.....+
T Consensus 547 A~~~g~v~~VkfLLe~gAdv~a------k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~Tp 609 (1143)
T KOG4177|consen 547 AVHYGNVDLVKFLLEHGADVNA------KDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTP 609 (1143)
T ss_pred HHhcCCchHHHHhhhCCccccc------cCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcch
Confidence 9999999999999999999999 88999999999999999999999999999999988776654
No 54
>PHA02917 ankyrin-like protein; Provisional
Probab=99.48 E-value=2.6e-13 Score=162.98 Aligned_cols=123 Identities=24% Similarity=0.206 Sum_probs=101.0
Q ss_pred hHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHH--HcCCHHHHHHHHHCCCCCccccC---CC---------
Q 003097 470 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCA--MLGYTWAILLFSWSGLSLDFRDK---YG--------- 534 (848)
Q Consensus 470 ~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa--~~G~~~~v~~LL~~Ga~in~~D~---~G--------- 534 (848)
+++..+..+...+ +++.|++ |+++|..|..|+||||.|+ ..|+.+++++|+++|+++|..|. .|
T Consensus 105 ~~~~~a~~~~~~e-~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 105 IFSYMKSKNVDVD-LIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR 183 (661)
T ss_pred hHHHHHhhcCCHH-HHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccc
Confidence 4444444444344 5555555 9999999999999999654 57899999999999999987653 34
Q ss_pred --CcHHHHHHH-----------cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCh--HHHHHHHhhhhhh
Q 003097 535 --WTALHWAAY-----------YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD--GLAAFLSEQALVA 599 (848)
Q Consensus 535 --~TpLh~Aa~-----------~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~--~iv~~Ll~~Ga~~ 599 (848)
.||||+|+. +|+.++|++|+++||+++. +|..|.||||+|+..|+. +++++|++ |++.
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~------~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~ 256 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS------IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDN 256 (661)
T ss_pred ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc------CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcc
Confidence 599999986 5689999999999999998 889999999999999996 79999985 8765
Q ss_pred c
Q 003097 600 Q 600 (848)
Q Consensus 600 ~ 600 (848)
.
T Consensus 257 ~ 257 (661)
T PHA02917 257 T 257 (661)
T ss_pred c
Confidence 3
No 55
>PHA02730 ankyrin-like protein; Provisional
Probab=99.48 E-value=2.4e-13 Score=160.07 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=96.8
Q ss_pred HHHHHHHhCCCCCC---cccccchHHHHHHcCCc---HHHHHHHHHc-CC--CCccccCCCCchHHH---HHHcC-----
Q 003097 450 WAYLFKSVGDKRTS---LPEAKDSFFELTLKSKL---KEWLLERVVE-GS--KTTEYDVHGQGVIHL---CAMLG----- 512 (848)
Q Consensus 450 ~~~l~~~l~~~~~~---~~~~~~~Ll~aa~~~~l---~e~L~~~L~~-Ga--~in~~D~~G~T~LH~---Aa~~G----- 512 (848)
..++++.|...+.+ ...+.+|||.++..++. .+ +++.|++ |+ ++|..|..|.||||. |+..+
T Consensus 358 ~ieIvelLIs~GAdIN~k~~G~TpLH~Aa~~nnn~i~~e-IvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~ 436 (672)
T PHA02730 358 SIPILRCMLDNGATMDKTTDNNYPLHDYFVNNNNIVDVN-VVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHC 436 (672)
T ss_pred cHHHHHHHHHCCCCCCcCCCCCcHHHHHHHHcCCcchHH-HHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccc
Confidence 34444544333322 24566777777766642 23 5555554 65 577778888888873 33222
Q ss_pred ----CHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHc--CC
Q 003097 513 ----YTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKK--GF 585 (848)
Q Consensus 513 ----~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~-~G~TpL~lA~~~--G~ 585 (848)
..+++++|+.+|+++|.+|..|.||||+|+..++.+++++|+++||+++. +|. .|.||||+|+.. |+
T Consensus 437 ~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~------~d~~~g~TaL~~Aa~~~~~~ 510 (672)
T PHA02730 437 YETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT------TSRSIINTAIQKSSYRRENK 510 (672)
T ss_pred cchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCcCCcCHHHHHHHhhcCc
Confidence 12457888888888888888888888888888888888888888888877 554 578888888763 67
Q ss_pred hHHHHHHHhhhhhh
Q 003097 586 DGLAAFLSEQALVA 599 (848)
Q Consensus 586 ~~iv~~Ll~~Ga~~ 599 (848)
.+++++|+++|++.
T Consensus 511 ~eIv~~LLs~ga~i 524 (672)
T PHA02730 511 TKLVDLLLSYHPTL 524 (672)
T ss_pred HHHHHHHHHcCCCH
Confidence 88888888888765
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.48 E-value=8.3e-14 Score=139.45 Aligned_cols=107 Identities=21% Similarity=0.171 Sum_probs=95.3
Q ss_pred CCCCccccCCCCchHHHHHHcCCH----HHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHH---HHHHHHcCCCCCCC
Q 003097 491 GSKTTEYDVHGQGVIHLCAMLGYT----WAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM---VVDLLSAGAKPNLV 563 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~----~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ei---v~~LL~~GA~in~~ 563 (848)
|++++..+..+.++||.||..|.. +++++|+..|++++..|..|+||||+|+.+|+.++ +++|++.|++++.
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~- 88 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA- 88 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC-
Confidence 567777888999999999999997 66678889999999999999999999999998654 8999999999998
Q ss_pred CCCCCCC-CCCCCHHHHHHHcCChHHHHHHHh-hhhhhcccc
Q 003097 564 TDPTSQN-PGGLNAADIASKKGFDGLAAFLSE-QALVAQFND 603 (848)
Q Consensus 564 td~~~~d-~~G~TpL~lA~~~G~~~iv~~Ll~-~Ga~~~~~~ 603 (848)
+| ..|.||||+|+..|+.+++++|++ .|++.+..+
T Consensus 89 -----~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 125 (166)
T PHA02743 89 -----RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN 125 (166)
T ss_pred -----CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC
Confidence 76 589999999999999999999995 798876654
No 57
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.48 E-value=2.1e-13 Score=144.92 Aligned_cols=132 Identities=19% Similarity=0.225 Sum_probs=110.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCCCchHHHHHHcC-----CHHHHHHHHHCCCCCcccc-CCCCcH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLG-----YTWAILLFSWSGLSLDFRD-KYGWTA 537 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~--Ga~in~~D~~G~T~LH~Aa~~G-----~~~~v~~LL~~Ga~in~~D-~~G~Tp 537 (848)
++.|.||+++...++. ++..|++ -|++|..|.-|.||+++|+... ...+|..|...| |||.+- ..|.|+
T Consensus 267 NGNTALHYsVSHaNF~--VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTA 343 (452)
T KOG0514|consen 267 NGNTALHYAVSHANFD--VVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQTA 343 (452)
T ss_pred CCCeeeeeeecccchH--HHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcchh
Confidence 4667889988888887 5666665 5799999999999999988643 467788787665 677664 469999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh-hhhhccccccc
Q 003097 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ-ALVAQFNDMTL 606 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~-Ga~~~~~~~~l 606 (848)
|++|+.+|+.++|+.||.+|||+|+ +|.+|.|+|+.|+.+||.+|+++|+.. +++..+.+...
T Consensus 344 LMLAVSHGr~d~vk~LLacgAdVNi------QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~Dg 407 (452)
T KOG0514|consen 344 LMLAVSHGRVDMVKALLACGADVNI------QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDG 407 (452)
T ss_pred hhhhhhcCcHHHHHHHHHccCCCcc------ccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCC
Confidence 9999999999999999999999999 999999999999999999999999875 56666655543
No 58
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.47 E-value=2.3e-13 Score=121.12 Aligned_cols=86 Identities=30% Similarity=0.392 Sum_probs=74.6
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHH
Q 003097 471 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 549 (848)
Q Consensus 471 Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ei 549 (848)
|+.|+..++.. +++.|++ +.+++. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 1 L~~A~~~~~~~--~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLE--ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHH--HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHH--HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence 56677777766 4555554 777776 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCC
Q 003097 550 VVDLLSAGAKPNL 562 (848)
Q Consensus 550 v~~LL~~GA~in~ 562 (848)
+++|+++|++++.
T Consensus 75 ~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 75 VKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHHTTT-TTS
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999987
No 59
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.46 E-value=2.8e-13 Score=147.07 Aligned_cols=105 Identities=13% Similarity=-0.018 Sum_probs=92.3
Q ss_pred cccCCCCchH-HHHHHcCCHHHHHHHHHCCCCCcccc----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-
Q 003097 496 EYDVHGQGVI-HLCAMLGYTWAILLFSWSGLSLDFRD----KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQ- 569 (848)
Q Consensus 496 ~~D~~G~T~L-H~Aa~~G~~~~v~~LL~~Ga~in~~D----~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~- 569 (848)
.+|..|.|++ |.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..|+.+++++|+++||+++. +
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~------~~ 100 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR------YA 100 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc------cc
Confidence 4577777754 55666789999999999999999974 5899999999999999999999999999997 4
Q ss_pred CCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003097 570 NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 570 d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l 606 (848)
+..|.||||+|+..|+.+++++|++.|++.+..+...
T Consensus 101 ~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G 137 (300)
T PHA02884 101 EEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDM 137 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 3579999999999999999999999999998776543
No 60
>PHA02792 ankyrin-like protein; Provisional
Probab=99.43 E-value=6.2e-13 Score=155.16 Aligned_cols=142 Identities=15% Similarity=0.094 Sum_probs=112.0
Q ss_pred HHHHHHHhCCCCCCcc--cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCC--CchHHHHHHcCCH---HHHHHHH
Q 003097 450 WAYLFKSVGDKRTSLP--EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG--QGVIHLCAMLGYT---WAILLFS 521 (848)
Q Consensus 450 ~~~l~~~l~~~~~~~~--~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G--~T~LH~Aa~~G~~---~~v~~LL 521 (848)
..++++.+.+.+.+.. .....++.+|..++.. +++.|++ |++++..|..| .||||+|+..+.. +++++|+
T Consensus 320 ~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~e--IVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI 397 (631)
T PHA02792 320 YINVIKCMIDEGATLYRFKHINKYFQKFDNRDPK--VVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK 397 (631)
T ss_pred cHHHHHHHHHCCCccccCCcchHHHHHHHcCCHH--HHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH
Confidence 3456666666665432 2345577777777665 6666666 99999988775 6999987776654 3578899
Q ss_pred HCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH---c-------CChHHHHH
Q 003097 522 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK---K-------GFDGLAAF 591 (848)
Q Consensus 522 ~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~---~-------G~~~iv~~ 591 (848)
.+|+++|.+|..|+||||+|+..++.+++++|+++|++++. +|..|.|||++|.. . .+.+++++
T Consensus 398 s~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~------kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~l 471 (631)
T PHA02792 398 PYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI------TTKYGSTCIGICVILAHACIPEIAELYIKILEI 471 (631)
T ss_pred hcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 88999999999976 2 23556777
Q ss_pred HHhhhhhh
Q 003097 592 LSEQALVA 599 (848)
Q Consensus 592 Ll~~Ga~~ 599 (848)
|+++|.+.
T Consensus 472 LLs~~p~i 479 (631)
T PHA02792 472 ILSKLPTI 479 (631)
T ss_pred HHhcCCCh
Confidence 88777554
No 61
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.43 E-value=4.1e-13 Score=149.64 Aligned_cols=137 Identities=23% Similarity=0.275 Sum_probs=117.8
Q ss_pred CcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCC--------------
Q 003097 463 SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSL-------------- 527 (848)
Q Consensus 463 ~~~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~i-------------- 527 (848)
...++.+.+|.+|+..+.. ++.++++ |++||..|..|+||||.|+..||..++++||..|+++
T Consensus 69 ~n~DglTalhq~~id~~~e--~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~ 146 (527)
T KOG0505|consen 69 CNVDGLTALHQACIDDNLE--MVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLA 146 (527)
T ss_pred cCCccchhHHHHHhcccHH--HHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccc
Confidence 3456788999999988776 5555555 9999999999999999999999999999999876542
Q ss_pred ---------------------------------------------ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003097 528 ---------------------------------------------DFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 528 ---------------------------------------------n~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+.++..|-|+||.|+..|..++.++|+.+|.++++
T Consensus 147 e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~ 226 (527)
T KOG0505|consen 147 EDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI 226 (527)
T ss_pred cCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccc
Confidence 22244589999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccccc
Q 003097 563 VTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 563 ~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l~ 607 (848)
+|.+|+||||.|+.-|+.+++++|+++|++.+.......
T Consensus 227 ------~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~ 265 (527)
T KOG0505|consen 227 ------KDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGE 265 (527)
T ss_pred ------ccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCC
Confidence 899999999999999999999999999999766655443
No 62
>PHA02730 ankyrin-like protein; Provisional
Probab=99.43 E-value=5.2e-13 Score=157.34 Aligned_cols=114 Identities=8% Similarity=-0.031 Sum_probs=99.1
Q ss_pred HHHHHHc-CCCCccccCCCCchHHHHHHcCC----HHHHHHHHHCCC--CCccccCCCCcHHHH---HHHcC--------
Q 003097 484 LLERVVE-GSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGL--SLDFRDKYGWTALHW---AAYYG-------- 545 (848)
Q Consensus 484 L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~----~~~v~~LL~~Ga--~in~~D~~G~TpLh~---Aa~~G-------- 545 (848)
++++|++ |+++|.. ..|.||||+|+..+. .+++++|+++|+ ++|.+|..|.||||. |...+
T Consensus 361 IvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~ 439 (672)
T PHA02730 361 ILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYET 439 (672)
T ss_pred HHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccch
Confidence 6666666 9999985 799999999998875 899999999998 699999999999994 33332
Q ss_pred -CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003097 546 -REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 546 -~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
..+++++|+.+||++|. +|..|.||||+|+..++.+++++|+++||+++..+.
T Consensus 440 ~~~~ivk~LIs~GADINa------kD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~ 493 (672)
T PHA02730 440 ILIDVFDILSKYMDDIDM------IDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSR 493 (672)
T ss_pred hHHHHHHHHHhcccchhc------cCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCC
Confidence 23579999999999999 899999999999999999999999999999877764
No 63
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.43 E-value=2.9e-13 Score=150.74 Aligned_cols=140 Identities=22% Similarity=0.318 Sum_probs=124.1
Q ss_pred chHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003097 469 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 469 ~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
..++.+|..+...+ +..+|-.|+.+|..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||-|+.+||..
T Consensus 42 a~~l~A~~~~d~~e-v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~ 120 (527)
T KOG0505|consen 42 AVFLEACSRGDLEE-VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLN 120 (527)
T ss_pred HHHHhccccccHHH-HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHH
Confidence 34788888888776 55556669999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC-----------------------------------------------------CCCCCCCCCCC
Q 003097 549 MVVDLLSAGAKPNLVT-----------------------------------------------------DPTSQNPGGLN 575 (848)
Q Consensus 549 iv~~LL~~GA~in~~t-----------------------------------------------------d~~~~d~~G~T 575 (848)
++.+|+.+||++.+++ ++...+..|-|
T Consensus 121 i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T 200 (527)
T KOG0505|consen 121 IVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGAT 200 (527)
T ss_pred HHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccch
Confidence 9999999999986653 35566777999
Q ss_pred HHHHHHHcCChHHHHHHHhhhhhhcccccccccc
Q 003097 576 AADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN 609 (848)
Q Consensus 576 pL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l~~~ 609 (848)
+||+|+.+|+.+++++|+++|.++++++...=.+
T Consensus 201 ~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtP 234 (527)
T KOG0505|consen 201 ALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTP 234 (527)
T ss_pred HHHHHHhhhHHHHHHHHHHhccCcccccccCCCc
Confidence 9999999999999999999999999988755443
No 64
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=99.41 E-value=2.3e-12 Score=153.34 Aligned_cols=306 Identities=17% Similarity=0.151 Sum_probs=179.3
Q ss_pred CCCccccCCCCchHHHHHHcCCHHHHHHHHHC-CCCCccccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCC
Q 003097 492 SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQ 569 (848)
Q Consensus 492 a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~-Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~ 569 (848)
.........|+|.||+++..+|.|+++.+++- |...+..|..|.--+|+ |..++.+++-+|+. .|..+++ +
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i------~ 637 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDI------R 637 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccc------c
Confidence 34455667899999999999999999999986 76667777778888888 66677777766664 6788888 8
Q ss_pred CCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccccccccCcccccccccccccCccchhhhhhhhhhHHhhhHHHHH
Q 003097 570 NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGSLQTGSTITVDTQNLTEDEVYLKDTLSAYRTAAEAAA 649 (848)
Q Consensus 570 d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l~~~is~~~~~~~~~~~~~~~~~~~~lsl~~sL~a~r~~~~AA~ 649 (848)
|..|+||||+|+..|+..++..|++.|++..+..-+..+...|.... .+...++. ..++.|.... +..
T Consensus 638 D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~----~la~s~g~-------~gia~~lse~-~L~ 705 (975)
T KOG0520|consen 638 DRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAA----DLARANGH-------KGIAGYLSEK-ALS 705 (975)
T ss_pred cCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchh----hhhhcccc-------cchHHHHhhh-HHH
Confidence 99999999999999999999999999988763221111111111111 11111110 0111111000 000
Q ss_pred HHHHHHhhhHH-------HHHHHHhhcC--------------ChHHHHHHHHHHHHHHHHHhhHHHHHHHH---------
Q 003097 650 RIQAAFREHSL-------KVQTKAIRFS--------------SPEEEAQNIIAALKIQHAFRNFEVRKKMA--------- 699 (848)
Q Consensus 650 ~IQ~~~R~~~~-------Rkr~~~~~~~--------------~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~--------- 699 (848)
..-..+....- -.+....-.+ .+-.....-.||..||.++|....++...
T Consensus 706 ~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~~~ 785 (975)
T KOG0520|consen 706 AHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDATKE 785 (975)
T ss_pred HHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhcch
Confidence 00000000000 0000000000 00112244567788888888776654332
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 003097 700 -------AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRV 772 (848)
Q Consensus 700 -------aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~r~~rk~~r~lr~~~~ 772 (848)
....++..++++..|. ...++..||..+|+|+.|+.|...+..++.||+.+|++ ..|+.++.+-....
T Consensus 786 ~i~~~~~~~m~~~~a~~~~~~r~----~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~-q~r~dy~ki~wSv~ 860 (975)
T KOG0520|consen 786 QISEELAVSMKASSAFSMCDDRS----DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGY-QVRKDYRKITWSVG 860 (975)
T ss_pred hhhhhhhhhhhcccchhcCcccc----chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhch-hHhhhhheechhhh
Confidence 2222333333222221 12488999999999999999999999999999999999 77777765543321
Q ss_pred hhhccCCCCCCchhHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHHHHHHH
Q 003097 773 EVEAVSDPNHEGDAEEDFYR-------ASR-KQAEERVERSVVRVQSMFRSKKAQ--EEYRRMKLAHDQ 831 (848)
Q Consensus 773 ~~~~~~~q~q~~~~~~~~l~-------~~R-kq~~~~~~~AvirIQs~~R~~~aR--r~~~~lk~~~~~ 831 (848)
+ | +..+..|+ ..+ ++..+.+..|++.||...|.++.- .-|++|.+++..
T Consensus 861 ~------l----ek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~ 919 (975)
T KOG0520|consen 861 V------L----EKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRAVVR 919 (975)
T ss_pred H------H----HHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 01111111 000 113335556888899988877655 455555555443
No 65
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40 E-value=4.4e-13 Score=147.47 Aligned_cols=119 Identities=22% Similarity=0.307 Sum_probs=103.8
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHH
Q 003097 471 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 549 (848)
Q Consensus 471 Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ei 549 (848)
|+.+++.|.+. |+..++. -.|+...+..|-|+||-|+..||.+||+|||..|+|||..|.+||||||+|+.+++..+
T Consensus 554 LLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 67778888776 6665555 56788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH--HcCChHHHHHHHhhh
Q 003097 550 VVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS--KKGFDGLAAFLSEQA 596 (848)
Q Consensus 550 v~~LL~~GA~in~~td~~~~d~~G~TpL~lA~--~~G~~~iv~~Ll~~G 596 (848)
++.|++.||.+-+.| -.++.||.+-+- ..|+.+|.+||....
T Consensus 632 ckqLVe~GaavfAsT-----lSDmeTa~eKCee~eeGY~~CsqyL~~vq 675 (752)
T KOG0515|consen 632 CKQLVESGAAVFAST-----LSDMETAAEKCEEMEEGYDQCSQYLYGVQ 675 (752)
T ss_pred HHHHHhccceEEeee-----cccccchhhhcchhhhhHHHHHHHHHHHH
Confidence 999999999997744 378899999775 459999999997543
No 66
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.39 E-value=6.5e-12 Score=116.55 Aligned_cols=121 Identities=26% Similarity=0.344 Sum_probs=106.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.++..++.. +++.+.. |.+.+..|..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+.
T Consensus 5 ~~g~t~l~~a~~~~~~~--~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 5 EDGRTPLHLAASNGHLE--VVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred cCCCCHHHHHHHcCcHH--HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 34678888888888763 4444444 88888899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003097 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll 593 (848)
.++.+++++|+..|.+++. .|..|.||+++|...++.+++++|+
T Consensus 83 ~~~~~~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999999999988777 7789999999999999999998874
No 67
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.38 E-value=1.2e-12 Score=114.01 Aligned_cols=103 Identities=24% Similarity=0.299 Sum_probs=85.2
Q ss_pred HHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHH
Q 003097 471 FFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMV 550 (848)
Q Consensus 471 Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv 550 (848)
+..+..++.+.+ +...+.+|.++|..- .|++|||+||-.|...++++|+..|++|+.+|+.|-|||.-|+..||.+||
T Consensus 6 ~~W~vkNG~~De-Vk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 6 VAWNVKNGEIDE-VKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred HhhhhccCcHHH-HHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 344444555554 666666687777654 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003097 551 VDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 551 ~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
++||+.||+-.. +.++|.+.+..+-
T Consensus 84 klLL~~GAdrt~------~~PdG~~~~eate 108 (117)
T KOG4214|consen 84 KLLLQNGADRTI------HAPDGTALIEATE 108 (117)
T ss_pred HHHHHcCcccce------eCCCchhHHhhcc
Confidence 999999999877 6688888777543
No 68
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.36 E-value=4.3e-12 Score=129.96 Aligned_cols=123 Identities=31% Similarity=0.386 Sum_probs=110.1
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCC-----HHHHHHHHHCCC---CCccccCCCCcHH
Q 003097 467 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY-----TWAILLFSWSGL---SLDFRDKYGWTAL 538 (848)
Q Consensus 467 ~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~-----~~~v~~LL~~Ga---~in~~D~~G~TpL 538 (848)
...+++.++..+.... +...+..|.+++..|..|.||||+|+..|+ .+++++|+..|+ ..+.+|..|+|||
T Consensus 73 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl 151 (235)
T COG0666 73 GRLPLHSAASKGDDKI-VKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPL 151 (235)
T ss_pred ccCHHHHHHHcCcHHH-HHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchh
Confidence 5677888877776552 334444599999999999999999999999 999999999999 6666799999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003097 539 HWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 539 h~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~G 596 (848)
|+|+..|+.+++++|++.|++++. .+..|.||+++|+..++..++..|+..+
T Consensus 152 ~~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 152 HWAALNGDADIVELLLEAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHHcCchHHHHHHHhcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence 999999999999999999999998 7899999999999999999999999987
No 69
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.35 E-value=3.5e-12 Score=131.83 Aligned_cols=126 Identities=24% Similarity=0.236 Sum_probs=109.5
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcc-ccCCCCcHHHHHH
Q 003097 464 LPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF-RDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~-~D~~G~TpLh~Aa 542 (848)
.+....+|+++..+++...+ ..+|..--++|.+|..|+++|..|+..|+.++|++||+.|+|||. ++..++||||+|+
T Consensus 9 ld~~~~~Lle~i~Kndt~~a-~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 9 LDAPKSPLLEAIDKNDTEAA-LALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred ccchhhHHHHHHccCcHHHH-HHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence 34567789999999887763 333333345999999999999999999999999999999999996 4667999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003097 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~G 596 (848)
..|+.++.++|++.|+.+.. .|.-|+|+..+|+.-||.+||..+-.+=
T Consensus 88 LSGn~dvcrllldaGa~~~~------vNsvgrTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYL------VNSVGRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred HcCCchHHHHHHhccCcccc------ccchhhhHHHHHHHhcchHHHHHHhccc
Confidence 99999999999999999998 7899999999999999999998876543
No 70
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.35 E-value=5e-12 Score=156.68 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=95.6
Q ss_pred CCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC--------------------------
Q 003097 461 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-------------------------- 513 (848)
Q Consensus 461 ~~~~~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~-------------------------- 513 (848)
+.....+.++||.||..++.. ++..|++ |+++|..|.+|.||||+|+..|+
T Consensus 552 n~~d~~G~TpLh~Aa~~g~~~--~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~A 629 (823)
T PLN03192 552 DIGDSKGRTPLHIAASKGYED--CVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTA 629 (823)
T ss_pred CCCCCCCCCHHHHHHHcChHH--HHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHH
Confidence 334556889999999988755 4445555 99999999999999986655554
Q ss_pred -----HHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC-CCHHHHHHHc
Q 003097 514 -----TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKK 583 (848)
Q Consensus 514 -----~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G-~TpL~lA~~~ 583 (848)
.++++.|+++|+++|.+|.+|+||||+|+..|+.+++++|+++||+++. .|..| .||++++...
T Consensus 630 a~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~------~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 630 AKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK------ANTDDDFSPTELRELL 699 (823)
T ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHH
Confidence 5566667889999999999999999999999999999999999999998 67777 9999887554
No 71
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.32 E-value=6e-12 Score=121.71 Aligned_cols=115 Identities=18% Similarity=0.115 Sum_probs=96.5
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003097 464 LPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 464 ~~~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..++.++||.|+.++++. ++.+++..|++++.+...|+||||-||..++.+++.+||++|+|||+.....+||||+||.
T Consensus 94 D~D~YTpLHRAaYn~h~d-iv~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~ 172 (228)
T KOG0512|consen 94 DEDEYTPLHRAAYNGHLD-IVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAG 172 (228)
T ss_pred ccccccHHHHHHhcCchH-HHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhc
Confidence 456788999999988876 2445555699999999999999999999999999999999999999999999999999998
Q ss_pred cCCH-HHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCC
Q 003097 544 YGRE-KMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGF 585 (848)
Q Consensus 544 ~G~~-eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~ 585 (848)
..+. ..+.+|+. .+..+.. ++..+.||+++|..-+-
T Consensus 173 ~rn~r~t~~~Ll~dryi~pg~------~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 173 NRNSRDTLELLLHDRYIHPGL------KNNLEETAFDIARRTSM 210 (228)
T ss_pred ccchHHHHHHHhhccccChhh------hcCccchHHHHHHHhhh
Confidence 8554 45555553 5566666 88999999999998653
No 72
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.31 E-value=3.8e-12 Score=146.20 Aligned_cols=126 Identities=20% Similarity=0.184 Sum_probs=116.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.+.+|+++++++.. +..+|++ .+-++.+|..|.+|||+||..|+.++++.|+..+..+|.....|.||||.|+..
T Consensus 48 ~gfTalhha~Lng~~~--is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQ--ISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH 125 (854)
T ss_pred cchhHHHHHHhcCchH--HHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh
Confidence 4678899999999887 6666666 788888999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003097 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~ 599 (848)
||.+++.+|+.+|+++-+ +|..+.|+|++|++.|..++++.|+......
T Consensus 126 gh~dvv~~Ll~~~adp~i------~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~ 174 (854)
T KOG0507|consen 126 GHLEVVFYLLKKNADPFI------RNNSKETVLDLASRFGRAEVVQMLLQKKFPV 174 (854)
T ss_pred cchHHHHHHHhcCCCccc------cCcccccHHHHHHHhhhhHHHHHHhhhccch
Confidence 999999999999999887 8899999999999999999999999984443
No 73
>PHA02792 ankyrin-like protein; Provisional
Probab=99.30 E-value=1.2e-11 Score=144.67 Aligned_cols=132 Identities=13% Similarity=-0.043 Sum_probs=108.6
Q ss_pred CCCCCCcccccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHH-cCCHHHHHHHHHCCCCCc--------
Q 003097 458 GDKRTSLPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAM-LGYTWAILLFSWSGLSLD-------- 528 (848)
Q Consensus 458 ~~~~~~~~~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~-~G~~~~v~~LL~~Ga~in-------- 528 (848)
...+....++.++++..|..+...|.+..++..|+++|.++..|.||||+|+. .|+.+++++||.+||+++
T Consensus 62 ~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~ 141 (631)
T PHA02792 62 SSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYK 141 (631)
T ss_pred hCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcc
Confidence 33333444556677777777666664444444499999999999999999965 699999999999998742
Q ss_pred ----------------------------cccCCCCcHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 003097 529 ----------------------------FRDKYGWTALHWAAYYG-------REKMVVDLLSAGAKPNLVTDPTSQNPGG 573 (848)
Q Consensus 529 ----------------------------~~D~~G~TpLh~Aa~~G-------~~eiv~~LL~~GA~in~~td~~~~d~~G 573 (848)
..|..|.||||+|+..+ +.+++++|+++|++++. .|..|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~------~d~~g 215 (631)
T PHA02792 142 IIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY------YTYRE 215 (631)
T ss_pred hhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc------cCCCC
Confidence 34566999999999999 89999999999999998 78899
Q ss_pred CCHHHHHHHcC--ChHHHHHHHhh
Q 003097 574 LNAADIASKKG--FDGLAAFLSEQ 595 (848)
Q Consensus 574 ~TpL~lA~~~G--~~~iv~~Ll~~ 595 (848)
.||||+|+.+. ..+++++|++.
T Consensus 216 ~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 216 HTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred ChHHHHHHHcccchHHHHHHHHhc
Confidence 99999999999 78999999884
No 74
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.28 E-value=8.3e-12 Score=123.11 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=84.1
Q ss_pred ccccchHHHHHHcCCcH--HHHHHHHH-cCCCCcccc-CCCCchHHHHHHcCCHHHHHHHHH-CCCCCccccCCCCcHHH
Q 003097 465 PEAKDSFFELTLKSKLK--EWLLERVV-EGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALH 539 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~--e~L~~~L~-~Ga~in~~D-~~G~T~LH~Aa~~G~~~~v~~LL~-~Ga~in~~D~~G~TpLh 539 (848)
..+.++||.++..++.. + +++.|+ .|+++|.+| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||
T Consensus 53 ~~g~t~Lh~a~~~~~~~~~e-~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~ 131 (154)
T PHA02736 53 RHGKQCVHIVSNPDKADPQE-KLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYY 131 (154)
T ss_pred CCCCEEEEeecccCchhHHH-HHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHH
Confidence 34778999998887653 3 334444 499999998 589999999999999999999998 59999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Q 003097 540 WAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+|+..|+.+++++|+..|+++++
T Consensus 132 ~A~~~~~~~i~~~Ll~~ga~~~~ 154 (154)
T PHA02736 132 VACERHDAKMMNILRAKGAQCKV 154 (154)
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999998753
No 75
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.28 E-value=8.4e-12 Score=108.91 Aligned_cols=93 Identities=20% Similarity=0.149 Sum_probs=85.8
Q ss_pred chHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 003097 503 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 582 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~ 582 (848)
--+.|+..+|..+-|+-.+..|.++|..- .|+||||+|+-+|..+++++|+..||+++. +|+.|.|||--|..
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHH
Confidence 34678999999999999999998888654 899999999999999999999999999998 89999999999999
Q ss_pred cCChHHHHHHHhhhhhhccc
Q 003097 583 KGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 583 ~G~~~iv~~Ll~~Ga~~~~~ 602 (848)
.||.+|+++|+..||+..+.
T Consensus 77 EGH~~cVklLL~~GAdrt~~ 96 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGADRTIH 96 (117)
T ss_pred HhhHHHHHHHHHcCccccee
Confidence 99999999999999997544
No 76
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.28 E-value=8.1e-12 Score=153.53 Aligned_cols=132 Identities=19% Similarity=0.128 Sum_probs=108.3
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCcccc--------------CCCCchHHHHHHcCCHHHHHHHHHCCCCCcc
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD--------------VHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 529 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D--------------~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~ 529 (848)
..+.+|||.|+..++.. +++.|++ |++++..+ ..|.||||+|+..|+.+++++|++.|+|+|.
T Consensus 126 ~~G~TpLhlAa~~~~~e--iVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 126 TPGITALHLAAHRQNYE--IVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT 203 (743)
T ss_pred CCCCcHHHHHHHhCCHH--HHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh
Confidence 45789999999998876 6666666 99998643 3599999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHcC---------CHHHHHHHHHcCCCCCCCC-CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhh
Q 003097 530 RDKYGWTALHWAAYYG---------REKMVVDLLSAGAKPNLVT-DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 530 ~D~~G~TpLh~Aa~~G---------~~eiv~~LL~~GA~in~~t-d~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~ 598 (848)
+|..|+||||+|+..+ ...+.++++..++...... -.+..|..|.||||+|+..|+.+++++|++.+..
T Consensus 204 ~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~ 282 (743)
T TIGR00870 204 ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK 282 (743)
T ss_pred HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHh
Confidence 9999999999999987 3456777777766652200 0023789999999999999999999999996543
No 77
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.28 E-value=3.2e-11 Score=111.84 Aligned_cols=99 Identities=26% Similarity=0.313 Sum_probs=91.8
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 003097 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA 576 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~Tp 576 (848)
.|..|.||||+|+..|+.+++++|+..|.+++..|..|.||||+|+..+..+++++|+..|++++. .+..|.||
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~~ 76 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNTP 76 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCH
Confidence 567899999999999999999999999999999999999999999999999999999999988777 77899999
Q ss_pred HHHHHHcCChHHHHHHHhhhhhhcc
Q 003097 577 ADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 577 L~lA~~~G~~~iv~~Ll~~Ga~~~~ 601 (848)
+|+|+..++.+++++|+.+|.+...
T Consensus 77 l~~a~~~~~~~~~~~L~~~~~~~~~ 101 (126)
T cd00204 77 LHLAARNGNLDVVKLLLKHGADVNA 101 (126)
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 9999999999999999999844433
No 78
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=3.8e-12 Score=103.79 Aligned_cols=55 Identities=40% Similarity=0.643 Sum_probs=26.3
Q ss_pred HHHCC-CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003097 520 FSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 580 (848)
Q Consensus 520 LL~~G-a~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA 580 (848)
||+.| +++|.+|..|.||||+||.+|+.++|++|++.|+++++ +|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence 45666 77777777777777777777777777777777777777 677777777776
No 79
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.25 E-value=1.9e-11 Score=150.25 Aligned_cols=148 Identities=17% Similarity=0.042 Sum_probs=111.3
Q ss_pred cCCCCHHHHHHHhCCCCCCcccccchHHHHHHcC-CcHHHHHHHHHc-CCC------Ccc----ccCCCCchHHHHHHcC
Q 003097 445 CISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKS-KLKEWLLERVVE-GSK------TTE----YDVHGQGVIHLCAMLG 512 (848)
Q Consensus 445 ~~~~~~~~l~~~l~~~~~~~~~~~~~Ll~aa~~~-~l~e~L~~~L~~-Ga~------in~----~D~~G~T~LH~Aa~~G 512 (848)
...++..++++.+...+.....+.++||.++... ...+.++..+.. +.+ ++. .+..|.||||+||..|
T Consensus 60 A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~ 139 (743)
T TIGR00870 60 AIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQ 139 (743)
T ss_pred HHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhC
Confidence 3456677788877666644445667777666522 223334444444 221 111 2356999999999999
Q ss_pred CHHHHHHHHHCCCCCcccc--------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHH
Q 003097 513 YTWAILLFSWSGLSLDFRD--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAAD 578 (848)
Q Consensus 513 ~~~~v~~LL~~Ga~in~~D--------------~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~ 578 (848)
+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++. +|..|.||||
T Consensus 140 ~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~------~d~~g~T~Lh 213 (743)
T TIGR00870 140 NYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT------ADSLGNTLLH 213 (743)
T ss_pred CHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh------HhhhhhHHHH
Confidence 9999999999999999763 2589999999999999999999999999988 8899999999
Q ss_pred HHHHcC---------ChHHHHHHHhhhhh
Q 003097 579 IASKKG---------FDGLAAFLSEQALV 598 (848)
Q Consensus 579 lA~~~G---------~~~iv~~Ll~~Ga~ 598 (848)
+|+..+ ...+.+++++.++.
T Consensus 214 ~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 214 LLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 999987 34566777777655
No 80
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23 E-value=1.9e-11 Score=98.76 Aligned_cols=54 Identities=31% Similarity=0.374 Sum_probs=34.1
Q ss_pred CCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHH
Q 003097 501 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLL 554 (848)
Q Consensus 501 G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL 554 (848)
|+||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567777777777777777777777777777777777777777777777777664
No 81
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.21 E-value=4.4e-11 Score=144.53 Aligned_cols=85 Identities=28% Similarity=0.372 Sum_probs=47.5
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 003097 505 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 584 (848)
Q Consensus 505 LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G 584 (848)
||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.+++++|+++|++++. +|..|.||||+|+..|
T Consensus 86 L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~~g 159 (664)
T PTZ00322 86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEENG 159 (664)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCC
Confidence 4555555555555555555555555555555555555555555555555555555554 4555555555555555
Q ss_pred ChHHHHHHHhh
Q 003097 585 FDGLAAFLSEQ 595 (848)
Q Consensus 585 ~~~iv~~Ll~~ 595 (848)
+.+++++|+++
T Consensus 160 ~~~iv~~Ll~~ 170 (664)
T PTZ00322 160 FREVVQLLSRH 170 (664)
T ss_pred cHHHHHHHHhC
Confidence 55555555555
No 82
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.16 E-value=1e-10 Score=141.45 Aligned_cols=104 Identities=19% Similarity=0.154 Sum_probs=90.6
Q ss_pred hHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003097 470 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
.|+.++..++.. .++.|+. |+++|..|..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+..|+.+
T Consensus 85 ~L~~aa~~G~~~--~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 85 ELCQLAASGDAV--GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHcCCHH--HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 478888888776 4444444 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCCCCCCCCCCCCCCCCCHHHHHH
Q 003097 549 MVVDLLSA-------GAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 549 iv~~LL~~-------GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
++++|+.+ |++++. .+..|.+|+..+.
T Consensus 163 iv~~Ll~~~~~~~~~ga~~~~------~~~~g~~~~~~~~ 196 (664)
T PTZ00322 163 VVQLLSRHSQCHFELGANAKP------DSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHhCCCcccccCCCCCc------cccCCCCccchhh
Confidence 99999998 666555 6777877776554
No 83
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.16 E-value=1.4e-10 Score=135.34 Aligned_cols=122 Identities=19% Similarity=0.209 Sum_probs=106.9
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccc---------cC--------------CCCchHHHHHHcCCHHHHHHHHH
Q 003097 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEY---------DV--------------HGQGVIHLCAMLGYTWAILLFSW 522 (848)
Q Consensus 467 ~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~---------D~--------------~G~T~LH~Aa~~G~~~~v~~LL~ 522 (848)
|.++||.|..+.+.. ++.+|++ |||++.+ |. .|..||-+||..+..+++++|++
T Consensus 184 GqSaLHiAIv~~~~~--~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAE--LVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred CcchHHHHHHhccHH--HHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 567788887777665 5555555 9999862 11 37789999999999999999999
Q ss_pred CCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003097 523 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAK--PNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 523 ~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~--in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~G 596 (848)
+|||++.+|.+|+|.||..+.+-..++.++++++|++ ..+ +|..|.|||.+|+..|..++.+.+++..
T Consensus 262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v------~N~qgLTPLtLAaklGk~emf~~ile~~ 331 (782)
T KOG3676|consen 262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV------RNNQGLTPLTLAAKLGKKEMFQHILERR 331 (782)
T ss_pred cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc------cccCCCChHHHHHHhhhHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999 554 8999999999999999999999999983
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.15 E-value=3.2e-11 Score=98.35 Aligned_cols=51 Identities=29% Similarity=0.398 Sum_probs=33.6
Q ss_pred C-CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHH
Q 003097 491 G-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 491 G-a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
| +++|..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|
T Consensus 5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 5 88999999999999999999999999999999999999999999999997
No 85
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.14 E-value=2.8e-11 Score=139.23 Aligned_cols=108 Identities=20% Similarity=0.164 Sum_probs=101.0
Q ss_pred CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 003097 493 KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 572 (848)
Q Consensus 493 ~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~ 572 (848)
.+|..|..|.|+||.||.+|+.+++++|+++.+-++..|..|.+|||+|++.|+.+++++|+..+..+|+ .+..
T Consensus 41 s~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na------~~~e 114 (854)
T KOG0507|consen 41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNA------VNIE 114 (854)
T ss_pred cccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCc------cccc
Confidence 5677899999999999999999999999999999999999999999999999999999999999988887 7789
Q ss_pred CCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003097 573 GLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 573 G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l 606 (848)
|.||||+|+.+||.+++.+|+.+|+++-+.+-+.
T Consensus 115 ~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~ 148 (854)
T KOG0507|consen 115 NETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSK 148 (854)
T ss_pred CcCccchhhhhcchHHHHHHHhcCCCccccCccc
Confidence 9999999999999999999999999987776544
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.14 E-value=8.5e-11 Score=94.93 Aligned_cols=54 Identities=39% Similarity=0.510 Sum_probs=46.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003097 534 GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 534 G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll 593 (848)
|+||||+||..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINA------QDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence 78999999999999999999999999998 7899999999999999999999986
No 87
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.08 E-value=1.2e-09 Score=111.70 Aligned_cols=106 Identities=26% Similarity=0.276 Sum_probs=96.4
Q ss_pred CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CCCCC
Q 003097 492 SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR-----EKMVVDLLSAGA---KPNLV 563 (848)
Q Consensus 492 a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~-----~eiv~~LL~~GA---~in~~ 563 (848)
......+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+ .+++++|++.|+ ..+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~- 142 (235)
T COG0666 64 RHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL- 142 (235)
T ss_pred cccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc-
Confidence 3444567779999999999999999999999999999999999999999999999 999999999999 3343
Q ss_pred CCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003097 564 TDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 564 td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~ 603 (848)
+|..|.||||+|+..|+.+++++|++.|++....+
T Consensus 143 -----~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~ 177 (235)
T COG0666 143 -----RDEDGNTPLHWAALNGDADIVELLLEAGADPNSRN 177 (235)
T ss_pred -----cCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccc
Confidence 78999999999999999999999999998877763
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=2.9e-10 Score=125.68 Aligned_cols=90 Identities=20% Similarity=0.095 Sum_probs=84.4
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC
Q 003097 506 HLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGF 585 (848)
Q Consensus 506 H~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~ 585 (848)
.-|+..|-.++|.-.+..--|+...+..|.||||-|++.||.+||++||+.|+|+|+ .|.+|+||||+|+.+++
T Consensus 555 LDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASCNn 628 (752)
T KOG0515|consen 555 LDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASCNN 628 (752)
T ss_pred HhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhcCc
Confidence 338888999999999988889999999999999999999999999999999999999 89999999999999999
Q ss_pred hHHHHHHHhhhhhhcc
Q 003097 586 DGLAAFLSEQALVAQF 601 (848)
Q Consensus 586 ~~iv~~Ll~~Ga~~~~ 601 (848)
.-+++.|++.|+.+-.
T Consensus 629 v~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 629 VPMCKQLVESGAAVFA 644 (752)
T ss_pred hHHHHHHHhccceEEe
Confidence 9999999999987643
No 89
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.05 E-value=4.8e-10 Score=130.88 Aligned_cols=131 Identities=19% Similarity=0.217 Sum_probs=104.3
Q ss_pred cccchHHHHHHcC--CcHHHHHHHHHc--CCCCcc----ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccc-------
Q 003097 466 EAKDSFFELTLKS--KLKEWLLERVVE--GSKTTE----YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------- 530 (848)
Q Consensus 466 ~~~~~Ll~aa~~~--~l~e~L~~~L~~--Ga~in~----~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~------- 530 (848)
.|+|.||.+.++. ...+ ++..|++ ..-+|. -...|+||||+|..+.+.++|++|++.||||+++
T Consensus 142 ~GET~Lh~~lL~~~~~~n~-la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~ 220 (782)
T KOG3676|consen 142 TGETLLHKALLNLSDGHNE-LARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFC 220 (782)
T ss_pred hhhhHHHHHHhcCchhHHH-HHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccC
Confidence 4666677766643 2223 3333333 222232 2346999999999999999999999999999874
Q ss_pred --c--------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHh
Q 003097 531 --D--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 594 (848)
Q Consensus 531 --D--------------~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~ 594 (848)
| ..|..||-+||..++.+|+++|+++|||+++ +|.+|+|.||+.+.+-..++-.++++
T Consensus 221 ~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L~ 294 (782)
T KOG3676|consen 221 PDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA------QDSNGNTVLHMLVIHFVTEMYDLALE 294 (782)
T ss_pred cccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc------cccCCChHHHHHHHHHHHHHHHHHHh
Confidence 1 2478999999999999999999999999999 99999999999999988899999999
Q ss_pred hhhh--hcccc
Q 003097 595 QALV--AQFND 603 (848)
Q Consensus 595 ~Ga~--~~~~~ 603 (848)
+|++ .++.|
T Consensus 295 ~ga~~l~~v~N 305 (782)
T KOG3676|consen 295 LGANALEHVRN 305 (782)
T ss_pred cCCCccccccc
Confidence 9999 55444
No 90
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.00 E-value=1e-09 Score=96.56 Aligned_cols=84 Identities=23% Similarity=0.278 Sum_probs=73.9
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeeccee-eeeCCeeeeecCCCCCceeEEEEEeCCCCC
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAE-FVQAGVYRCFLPPHSPGLFLLYMSLDGHKP 374 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~-~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~ 374 (848)
+.|++|+|.|++..||++|+|.|.+|.. ....+.|+||+...+.. .++++.|.|.+|++.+|.+++.|...+...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~ 76 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQI 76 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCe
Confidence 4699999999999999999999999922 25589999999999988 999999999999999999999999998667
Q ss_pred ccccccccc
Q 003097 375 ISQVLNFEY 383 (848)
Q Consensus 375 ~Sev~~Fey 383 (848)
+++...|+|
T Consensus 77 ~~~~~~F~Y 85 (85)
T PF01833_consen 77 YSNNTSFTY 85 (85)
T ss_dssp EEEEEEEEE
T ss_pred EECCeeeEC
Confidence 888888887
No 91
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.94 E-value=1.7e-09 Score=127.48 Aligned_cols=253 Identities=16% Similarity=0.168 Sum_probs=164.5
Q ss_pred CcceEEEcCCeecceeeeeCCeeeeecCCC--CCceeEEEEEeCCCCCcccccccccCC-CCCccCCCCccccchhhHHH
Q 003097 329 KSNMFCVCGEVRVPAEFVQAGVYRCFLPPH--SPGLFLLYMSLDGHKPISQVLNFEYRS-PQLHAPVASSEDKSKWEEFQ 405 (848)
Q Consensus 329 ~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph--~~G~Vpl~v~~~~~~~~Sev~~Fey~~-~~~~~~~~~~~~~~~~~e~~ 405 (848)
..-..|.-|+.+..--++..|.-. .| ..|+||+.++...++ +.++..-.+. -.++...+.+.+ +.+.
T Consensus 760 ~LT~acaggh~e~vellv~rgani----ehrdkkgf~plImaatagh--~tvV~~llk~ha~veaQsdrtkd----t~lS 829 (2131)
T KOG4369|consen 760 NLTSACAGGHREEVELLVVRGANI----EHRDKKGFVPLIMAATAGH--ITVVQDLLKAHADVEAQSDRTKD----TMLS 829 (2131)
T ss_pred cccccccCccHHHHHHHHHhcccc----cccccccchhhhhhcccCc--hHHHHHHHhhhhhhhhhcccccC----ceEE
Confidence 334678888877666666666511 23 589999999987654 2222222211 011111111100 0011
Q ss_pred H-----HHHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHHHHHHHhCCCC--CC----cccccchHHHH
Q 003097 406 V-----QMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKR--TS----LPEAKDSFFEL 474 (848)
Q Consensus 406 l-----~~Rl~~LL~~~~~~l~il~~k~~~~~l~e~~~~~~~i~~~~~~~~~l~~~l~~~~--~~----~~~~~~~Ll~a 474 (848)
+ -.|+++||...... |. . .+..++..+-....++...+++.+...+ +. ..-+-.||+.+
T Consensus 830 lacsggr~~vvelLl~~gan------ke-h---rnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmla 899 (2131)
T KOG4369|consen 830 LACSGGRTRVVELLLNAGAN------KE-H---RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLA 899 (2131)
T ss_pred EecCCCcchHHHHHHHhhcc------cc-c---cchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhh
Confidence 1 23666776433222 11 1 1122222223334578888888875554 22 23355689999
Q ss_pred HHcCCcHHHHHHHHHcCCCCcc-ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHH
Q 003097 475 TLKSKLKEWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDL 553 (848)
Q Consensus 475 a~~~~l~e~L~~~L~~Ga~in~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~L 553 (848)
.+.++-.. .+.+|..|.|+|. ...+-+|+|-+|+..|+.+++.+||.+.+++..+-+.|.|||+-++..|.+++-.+|
T Consensus 900 tmngh~~a-t~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~l 978 (2131)
T KOG4369|consen 900 TMNGHQAA-TLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLL 978 (2131)
T ss_pred hhccccHH-HHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhh
Confidence 89888764 4444555999998 455678999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003097 554 LSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 554 L~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l 606 (848)
|..|||+|+-- .-..-.|+|-+++..||...+..|+...+...+.|...
T Consensus 979 i~~gad~nasP----vp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG 1027 (2131)
T KOG4369|consen 979 IAAGADTNASP----VPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKG 1027 (2131)
T ss_pred hhcccccccCC----CCCcCCccceeecCCCchhhhHHhhCCccceecccCCC
Confidence 99999999832 22344567777777777777777777776666665443
No 92
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.92 E-value=5.7e-09 Score=92.67 Aligned_cols=83 Identities=25% Similarity=0.348 Sum_probs=69.5
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCC-CceeEEEEEeCCCCC
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHKP 374 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~-~G~Vpl~v~~~~~~~ 374 (848)
+.|++|+|..||..|||+|+|.|.+|.. .....|+||+.+.....+.+..|.|.+|++. .|.++|.|..++. .
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~-~ 74 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGA-R 74 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCc-c
Confidence 3699999999999999999999999965 3458999999876666678889999999985 7899999998876 3
Q ss_pred cccccccccC
Q 003097 375 ISQVLNFEYR 384 (848)
Q Consensus 375 ~Sev~~Fey~ 384 (848)
.+....|+|.
T Consensus 75 ~~~~~~F~Y~ 84 (85)
T cd01179 75 RLAPLVFTYT 84 (85)
T ss_pred cCCCccEEEe
Confidence 4445778885
No 93
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.84 E-value=1.5e-08 Score=90.18 Aligned_cols=84 Identities=24% Similarity=0.247 Sum_probs=69.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEc-CCeecceeeeeCCeeeeecCCCCC---ceeEEEEEeCC
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-GEVRVPAEFVQAGVYRCFLPPHSP---GLFLLYMSLDG 371 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~F-G~~~vpa~~~~~gvl~C~~Pph~~---G~Vpl~v~~~~ 371 (848)
+.|++|+|.+++.+||++|+|.|.+|.. ...+.|+| |+.......+.+..|.|.+|+... |.|.|.|...+
T Consensus 1 P~I~~i~P~~g~~~GGt~itI~G~~f~~-----~~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~ 75 (89)
T cd00102 1 PVITSISPSSGPVSGGTEVTITGSNFGS-----GSNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGN 75 (89)
T ss_pred CEEeEEECCcCCCCCCeEEEEEEECCCC-----CCcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCC
Confidence 3699999999999999999999999965 22699999 888777777789999999999854 78888887665
Q ss_pred CCCcccccccccC
Q 003097 372 HKPISQVLNFEYR 384 (848)
Q Consensus 372 ~~~~Sev~~Fey~ 384 (848)
....+....|+|.
T Consensus 76 ~~~~~~~~~F~Y~ 88 (89)
T cd00102 76 GGITSSPLTFTYV 88 (89)
T ss_pred CcccCCCccEEee
Confidence 3356777788884
No 94
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.83 E-value=1.9e-09 Score=127.15 Aligned_cols=129 Identities=19% Similarity=0.161 Sum_probs=111.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccc-cCCCCcHHHHHHH
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALHWAAY 543 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~-D~~G~TpLh~Aa~ 543 (848)
+.+++|-.+|..++-+ ++++|+. |+++..+|+.|.+||.+|+-.||..+|+.|+.+.++|+.+ |..+.|+|-+||.
T Consensus 756 n~~t~LT~acaggh~e--~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs 833 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHRE--EVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS 833 (2131)
T ss_pred cccccccccccCccHH--HHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC
Confidence 4456677777766654 4555554 9999999999999999999999999999999999999864 7789999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003097 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~ 602 (848)
.|+.++|++||.+|++-.. ++-..+|||.+|..-|+.+|+.+|+.+|+.++-.
T Consensus 834 ggr~~vvelLl~~gankeh------rnvsDytPlsla~Sggy~~iI~~llS~GseInSr 886 (2131)
T KOG4369|consen 834 GGRTRVVELLLNAGANKEH------RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSR 886 (2131)
T ss_pred CCcchHHHHHHHhhccccc------cchhhcCchhhhcCcchHHHHHHHhhcccccccc
Confidence 9999999999999999877 7888999999999999999999999999776543
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.82 E-value=1.9e-08 Score=110.86 Aligned_cols=97 Identities=27% Similarity=0.222 Sum_probs=89.0
Q ss_pred CccccCCCCch------HHHHHHcCCHHHHHHHHHCCCCCccccC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 003097 494 TTEYDVHGQGV------IHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDP 566 (848)
Q Consensus 494 in~~D~~G~T~------LH~Aa~~G~~~~v~~LL~~Ga~in~~D~-~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~ 566 (848)
...+|.+|.|. ||..++.|+.+..--||..|+++|..+. .|.||||.|+..|+..-+++|+-+|||+++
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a---- 195 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA---- 195 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC----
Confidence 45677777776 8999999999999999999999999876 499999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003097 567 TSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 567 ~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~G 596 (848)
.|.+|.||+++|...||.++++-|++.-
T Consensus 196 --~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 196 --QDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred --CCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 8999999999999999999999998865
No 96
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.79 E-value=1.5e-08 Score=105.27 Aligned_cols=98 Identities=21% Similarity=0.123 Sum_probs=88.8
Q ss_pred CchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003097 502 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 502 ~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
..+|.-+...|..+....||+.--++|.+|..|.|+|..|+..|+.++|++||+.|||+|.. ++..++||||+|+
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~-----qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK-----QHGTLYTPLMFAA 87 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc-----cccccccHHHHHH
Confidence 57788888889988888888776679999999999999999999999999999999999984 5788999999999
Q ss_pred HcCChHHHHHHHhhhhhhccccc
Q 003097 582 KKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 582 ~~G~~~iv~~Ll~~Ga~~~~~~~ 604 (848)
..|+.++.++|++.|+...+-|.
T Consensus 88 LSGn~dvcrllldaGa~~~~vNs 110 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYLVNS 110 (396)
T ss_pred HcCCchHHHHHHhccCccccccc
Confidence 99999999999999998876554
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.70 E-value=8.4e-09 Score=119.21 Aligned_cols=83 Identities=25% Similarity=0.363 Sum_probs=79.0
Q ss_pred CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 003097 494 TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 572 (848)
Q Consensus 494 in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~-~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~ 572 (848)
.|.+|..|+|+||+|+..|...++++||.+|++++.+|. .||||||-|..+|+.+|+-+||.+|+...+ +|+.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence 677899999999999999999999999999999999997 599999999999999999999999999988 8999
Q ss_pred CCCHHHHHHH
Q 003097 573 GLNAADIASK 582 (848)
Q Consensus 573 G~TpL~lA~~ 582 (848)
|..||++-++
T Consensus 119 glsplq~~~r 128 (1267)
T KOG0783|consen 119 GLSPLQFLSR 128 (1267)
T ss_pred CCCHHHHHhh
Confidence 9999998776
No 98
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.65 E-value=7.4e-08 Score=107.30 Aligned_cols=121 Identities=26% Similarity=0.275 Sum_probs=109.1
Q ss_pred chHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCC--CccccCCCCcHHHHHHHcCC
Q 003097 469 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--LDFRDKYGWTALHWAAYYGR 546 (848)
Q Consensus 469 ~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~--in~~D~~G~TpLh~Aa~~G~ 546 (848)
..++.+++.+++.+ +.+....|.++-.++.+..|+||+|+..|+-++|++||.+|.. +|..|..|.|+||-|+..++
T Consensus 868 eeil~av~~~D~~k-lqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMK-LQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHHHhccHHH-HHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 34788888888776 5666667889989999999999999999999999999999865 68889999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003097 547 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 547 ~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~G 596 (848)
..+..+|++.||.... .|..|.||-.-|...|..+++.||....
T Consensus 947 r~vc~~lvdagasl~k------td~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRK------TDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred hHHHHHHHhcchhhee------cccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 9999999999999877 7899999999999999999999997754
No 99
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.55 E-value=7e-08 Score=106.14 Aligned_cols=94 Identities=24% Similarity=0.221 Sum_probs=85.6
Q ss_pred cCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCH
Q 003097 498 DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNA 576 (848)
Q Consensus 498 D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~Tp 576 (848)
+.++...+++||..|....++-+.-.|.|++.+|.+.+|+||.||..|+++++++|++ .+.+++. +|..|+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~------kDRw~rtP 576 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDP------KDRWGRTP 576 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCCh------hhccCCCc
Confidence 3456778999999999999999999999999999999999999999999999999997 5677666 99999999
Q ss_pred HHHHHHcCChHHHHHHHhhhh
Q 003097 577 ADIASKKGFDGLAAFLSEQAL 597 (848)
Q Consensus 577 L~lA~~~G~~~iv~~Ll~~Ga 597 (848)
|+-|...+|.+++++|.+.--
T Consensus 577 lDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred chHhHhcCcHHHHHHHHHHhc
Confidence 999999999999999987643
No 100
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.51 E-value=5.8e-07 Score=80.44 Aligned_cols=85 Identities=21% Similarity=0.235 Sum_probs=64.3
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCC-CceeEEEEEeCCCC-
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHK- 373 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~-~G~Vpl~v~~~~~~- 373 (848)
+.|+.|+|..|+..||+.|+|.|.+|... .....|.||+.+.....+.+..+.|.+|+.. +|..++.|.-.+..
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANV 76 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCccc
Confidence 46999999999999999999999998662 2369999999877666678899999999985 32455555554442
Q ss_pred --CcccccccccC
Q 003097 374 --PISQVLNFEYR 384 (848)
Q Consensus 374 --~~Sev~~Fey~ 384 (848)
..+....|+|.
T Consensus 77 ~~~~~~~~~F~Y~ 89 (90)
T cd00603 77 SARVLSNTTFTYV 89 (90)
T ss_pred cccccCCcceEEe
Confidence 24455667663
No 101
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.48 E-value=8.1e-07 Score=99.91 Aligned_cols=94 Identities=24% Similarity=0.343 Sum_probs=73.3
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCC--CCcc--ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003097 467 AKDSFFELTLKSKLKEWLLERVVEGS--KTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 467 ~~~~Ll~aa~~~~l~e~L~~~L~~Ga--~in~--~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
....|+.|....++.. ++-+|..|. .+|. -+.+|+|+||+||..|+..+..+|+++|+|+-.+|..|.|||.||-
T Consensus 624 lgqqLl~A~~~~Dl~t-~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 624 LGQQLLRAVAAEDLQT-AILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR 702 (749)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence 4456777777766653 333344443 3333 5667899999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC
Q 003097 543 YYGREKMVVDLLSAGAKPN 561 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in 561 (848)
..|..+|+.+|+.+|+...
T Consensus 703 ~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hcccHHHHHHHHHcCCCcc
Confidence 9999999999999987654
No 102
>PF13606 Ank_3: Ankyrin repeat
Probab=98.47 E-value=1.7e-07 Score=66.20 Aligned_cols=30 Identities=43% Similarity=0.442 Sum_probs=24.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003097 533 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 533 ~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+|+||||+||..|+.++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 478888888888888888888888888763
No 103
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.44 E-value=8.6e-07 Score=80.27 Aligned_cols=87 Identities=13% Similarity=0.023 Sum_probs=65.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecce---eeeeCCeeeeecCCCCC--ceeEEEEEeC
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPA---EFVQAGVYRCFLPPHSP--GLFLLYMSLD 370 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa---~~~~~gvl~C~~Pph~~--G~Vpl~v~~~ 370 (848)
+.|++|+|..||.+|||.|+|.|.+|....+ .....+++|+.+-.- .......|+|.+||+.+ +..+|.|...
T Consensus 1 P~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~ 78 (94)
T cd01180 1 PVITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVG 78 (94)
T ss_pred CeeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEEC
Confidence 3699999999999999999999999965211 135789999974221 24566789999999853 7888888886
Q ss_pred CCC-CcccccccccC
Q 003097 371 GHK-PISQVLNFEYR 384 (848)
Q Consensus 371 ~~~-~~Sev~~Fey~ 384 (848)
+.. .++....|+|.
T Consensus 79 ~~~~~~~~~~~F~Y~ 93 (94)
T cd01180 79 HGSFRTESSEGFSFV 93 (94)
T ss_pred CceecccccCceEEe
Confidence 653 45556778875
No 104
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.41 E-value=8.6e-07 Score=79.27 Aligned_cols=83 Identities=25% Similarity=0.302 Sum_probs=63.1
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeee--eCCeeeeecCCCC--CceeEE-EEEeC
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFV--QAGVYRCFLPPHS--PGLFLL-YMSLD 370 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~--~~gvl~C~~Pph~--~G~Vpl-~v~~~ 370 (848)
+.|+.|+|.+|+..||++|+|+|.+|.. .....|.|+...+++.+. .+..|.|.+|+.. ++.+++ .|...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 5799999999999999999999999976 556778887756666665 5788999999874 677777 66665
Q ss_pred CCCCccccccccc
Q 003097 371 GHKPISQVLNFEY 383 (848)
Q Consensus 371 ~~~~~Sev~~Fey 383 (848)
+...-++...|+|
T Consensus 77 ~~~~~~~~~~f~y 89 (90)
T smart00429 77 NGGVPSSPQPFTY 89 (90)
T ss_pred CCCccCcccCeEE
Confidence 5443333345555
No 105
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.30 E-value=3.4e-06 Score=101.63 Aligned_cols=84 Identities=27% Similarity=0.305 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 003097 644 AAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLNM 720 (848)
Q Consensus 644 ~~~AA~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~---~~~aA~~IQ~~~Rg~~~Rk~f~~~ 720 (848)
...+++.||+.+|+|..|++|..++ .+++.||+.+||+.+|+ +..||+.||+.+|+|..|+.|...
T Consensus 672 l~~~~~~iq~~~r~~~~r~~f~~~r-----------~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~ 740 (862)
T KOG0160|consen 672 LSAAKVLIQRQIRGYLARKKFLQLR-----------SAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRAL 740 (862)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4557777999999999999998888 99999999999999998 778999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHH
Q 003097 721 RRQAIKIQAAFRGFQVRK 738 (848)
Q Consensus 721 r~aai~IQa~~Rg~~~Rk 738 (848)
+.+++.||+.+|++..|.
T Consensus 741 ~~~~~~~qs~~r~~~~r~ 758 (862)
T KOG0160|consen 741 IPASITIQSGVRAMLARN 758 (862)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999999988
No 106
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.29 E-value=9.9e-07 Score=63.64 Aligned_cols=30 Identities=43% Similarity=0.474 Sum_probs=23.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003097 533 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 533 ~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 477888888888888888888888888776
No 107
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.28 E-value=2.3e-06 Score=94.86 Aligned_cols=85 Identities=18% Similarity=0.237 Sum_probs=71.0
Q ss_pred hHHHHHHcCCcHHHHHHHHHcCCCCcccc-CCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003097 470 SFFELTLKSKLKEWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D-~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
+||..+..++++ ..+.+|..|+++|..+ +.|.||||.||+.|...-+++|+-+|+|++..|.+|.||+.+|-..||-+
T Consensus 136 QLhasvRt~nle-t~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 136 QLHSSVRTGNLE-TCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHhhcccHH-HHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence 455555555555 3555556699999965 46999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHH
Q 003097 549 MVVDLLS 555 (848)
Q Consensus 549 iv~~LL~ 555 (848)
+.+-|++
T Consensus 215 laeRl~e 221 (669)
T KOG0818|consen 215 LAERLVE 221 (669)
T ss_pred HHHHHHH
Confidence 8877664
No 108
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=98.23 E-value=5.2e-05 Score=94.33 Aligned_cols=146 Identities=21% Similarity=0.177 Sum_probs=102.5
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q 003097 643 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLN 719 (848)
Q Consensus 643 ~~~~AA~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~---~~~aA~~IQ~~~Rg~~~Rk~f~~ 719 (848)
.....+++||++|||+..|+++.+.. +...++..+|..+|-+..+. ..++++.||..||....|+.+..
T Consensus 743 ~~~~~~~~iq~aiR~~~~rrr~~~~~--------k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~ 814 (1463)
T COG5022 743 KLDNIATRIQRAIRGRYLRRRYLQAL--------KRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRS 814 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHH
Confidence 35678999999999999999996544 34444445555444332221 23488889999999999998888
Q ss_pred HHHHHHHHH-HHHHhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCchhHHHHHHHHHH
Q 003097 720 MRRQAIKIQ-AAFRGFQVRKQ--YGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEEDFYRASRK 796 (848)
Q Consensus 720 ~r~aai~IQ-a~~Rg~~~Rk~--y~~~~~aa~~IQ~~~R~~r~~rk~~r~lr~~~~~~~~~~~q~q~~~~~~~~l~~~Rk 796 (848)
....++.+| ..+|....|.. -.....+...+|+++|.. .+++.
T Consensus 815 ~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~-~~~kr--------------------------------- 860 (1463)
T COG5022 815 YLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSL-KAKKR--------------------------------- 860 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh-hhhHH---------------------------------
Confidence 888888888 66776666663 344455788888887666 22222
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 003097 797 QAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQA 832 (848)
Q Consensus 797 q~~~~~~~AvirIQs~~R~~~aRr~~~~lk~~~~~a 832 (848)
+..+.+.++.+|+.+|...|++++..++.+..+.
T Consensus 861 --~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~ 894 (1463)
T COG5022 861 --FSLLKKETIYLQSAQRVELAERQLQELKIDVKSI 894 (1463)
T ss_pred --HHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 2234467777888899989999988888877653
No 109
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.22 E-value=2.3e-06 Score=96.33 Aligned_cols=90 Identities=19% Similarity=0.102 Sum_probs=76.8
Q ss_pred HHHHHcCCHHHHHHHHHCCCC--Cc--cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003097 506 HLCAMLGYTWAILLFSWSGLS--LD--FRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 506 H~Aa~~G~~~~v~~LL~~Ga~--in--~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
.-|+.......+-+||.+|.. +| .-+.+|+||||+||..|++.+.++|+-+|+|+.+ +|..|.|||.||.
T Consensus 629 l~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~yar 702 (749)
T KOG0705|consen 629 LRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYAR 702 (749)
T ss_pred HHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhHh
Confidence 345555566777788988854 33 3466789999999999999999999999999998 8999999999999
Q ss_pred HcCChHHHHHHHhhhhhhcc
Q 003097 582 KKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 582 ~~G~~~iv~~Ll~~Ga~~~~ 601 (848)
..|..+|+.+|+.+|+.+..
T Consensus 703 ~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hcccHHHHHHHHHcCCCccc
Confidence 99999999999999987643
No 110
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=2.5e-06 Score=95.88 Aligned_cols=87 Identities=20% Similarity=0.309 Sum_probs=69.3
Q ss_pred hHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003097 470 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
+++.++........-.+++.+ +..++..|..|.||||+|+.+|+...++.|+..|+++..++..||+|||-|+..|+..
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 355555555444322222223 6678889999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHc
Q 003097 549 MVVDLLSA 556 (848)
Q Consensus 549 iv~~LL~~ 556 (848)
++..++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 88776643
No 111
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=2.7e-06 Score=95.67 Aligned_cols=87 Identities=24% Similarity=0.254 Sum_probs=74.3
Q ss_pred chHHHHHHcCCHHHHHH-H-HHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003097 503 GVIHLCAMLGYTWAILL-F-SWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 580 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~-L-L~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA 580 (848)
-|||+++.....+-+.. | .+.+..|+.+|..|.||||+|+..|+.+.++.|+.+||++.+ +|..|++|||-|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence 45999988776554443 3 345678999999999999999999999999999999999998 899999999999
Q ss_pred HHcCChHHHHHHHhh
Q 003097 581 SKKGFDGLAAFLSEQ 595 (848)
Q Consensus 581 ~~~G~~~iv~~Ll~~ 595 (848)
+..|+..++..++.+
T Consensus 96 v~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRH 110 (560)
T ss_pred HHcCCHHHHHHHHHH
Confidence 999999887766643
No 112
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.20 E-value=4.4e-06 Score=76.33 Aligned_cols=72 Identities=24% Similarity=0.369 Sum_probs=56.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-ecceeeeeCCeeeeecCCCCC-------ceeEEEE
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGVYRCFLPPHSP-------GLFLLYM 367 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~-~vpa~~~~~gvl~C~~Pph~~-------G~Vpl~v 367 (848)
+.|++|+|.|+|.+||+.|+|+|.+|.. .....+.+.||+. .++..+.++..+.|..|+... +..|+.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds---~q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~ 77 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNT---VQEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEF 77 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCc---ccccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEE
Confidence 3699999999999999999999999965 2234788999994 346667788899999998733 5555555
Q ss_pred EeC
Q 003097 368 SLD 370 (848)
Q Consensus 368 ~~~ 370 (848)
...
T Consensus 78 ~fd 80 (99)
T cd01181 78 GLD 80 (99)
T ss_pred EEe
Confidence 543
No 113
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.19 E-value=1.3e-05 Score=96.61 Aligned_cols=77 Identities=26% Similarity=0.288 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 003097 680 IAALKIQHAFRNFEVRKKMA----AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAIL 755 (848)
Q Consensus 680 ~Aa~~IQ~~~R~~~~r~~~~----aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R 755 (848)
.+++.||+.+|+|..|+.+. +++.||+.+||+..|+... ...+++.||+.||++..|++|+..+.+++.+|+.+|
T Consensus 674 ~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~~r 752 (862)
T KOG0160|consen 674 AAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQSGVR 752 (862)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445666666666666532 6666666666666666222 444666666666666666666666666666666666
Q ss_pred HH
Q 003097 756 RW 757 (848)
Q Consensus 756 ~~ 757 (848)
++
T Consensus 753 ~~ 754 (862)
T KOG0160|consen 753 AM 754 (862)
T ss_pred HH
Confidence 66
No 114
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.17 E-value=1.7e-06 Score=95.47 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=84.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHH-CCCCCccccCCCCcHHHHHHHc
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~-~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
+...+++.++..|++.. +..+++.|.|++..|.+.+|+||.||..|+.+++++||. .+++++.+|.+|+|||.-|...
T Consensus 505 ~~~i~~~~aa~~GD~~a-lrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F 583 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSA-LRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF 583 (622)
T ss_pred cchhhhhhhhhcCCHHH-HHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence 34457889999998875 777778899999999999999999999999999999996 5899999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCC
Q 003097 545 GREKMVVDLLSAGAKPN 561 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in 561 (848)
+|.+++++|-+.-...+
T Consensus 584 ~h~~v~k~L~~~~~~y~ 600 (622)
T KOG0506|consen 584 KHKEVVKLLEEAQYPYT 600 (622)
T ss_pred CcHHHHHHHHHHhcccc
Confidence 99999999988654433
No 115
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.16 E-value=2.4e-06 Score=61.64 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=31.1
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCccccC
Q 003097 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK 532 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~ 532 (848)
+|.||||+|+..|+.+++++|+.+|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 116
>PF13606 Ank_3: Ankyrin repeat
Probab=98.16 E-value=2.2e-06 Score=60.51 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=28.3
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCcc
Q 003097 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLDF 529 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~ 529 (848)
+|+||||+||..|+.++|++||++|+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 117
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.13 E-value=1.3e-05 Score=70.30 Aligned_cols=79 Identities=14% Similarity=0.058 Sum_probs=67.1
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCCceeEEEEEeCCCCCc
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~~ 375 (848)
+.|..++|.-+.. |.+|+|.|..|-+ ..-.++||+.+++...|+|..+.|.+|.+.+|..++.|...++. -
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~-~ 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGS------APGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGA-T 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCC------CCcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCc-c
Confidence 5699999999976 8899999999964 13578999999998899999999999999999999999987663 4
Q ss_pred cccccccc
Q 003097 376 SQVLNFEY 383 (848)
Q Consensus 376 Sev~~Fey 383 (848)
|+...|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 66666654
No 118
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.01 E-value=6.6e-06 Score=99.94 Aligned_cols=100 Identities=26% Similarity=0.299 Sum_probs=88.4
Q ss_pred cCCCCcc--ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 003097 490 EGSKTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPT 567 (848)
Q Consensus 490 ~Ga~in~--~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~ 567 (848)
.++++|. .-..|.|+||.|+..|..-++++|+.+|+++|..|..|.||||.+...|+...+.+|++.||+.++
T Consensus 643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a----- 717 (785)
T KOG0521|consen 643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA----- 717 (785)
T ss_pred chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc-----
Confidence 3555554 334689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003097 568 SQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 568 ~~d~~G~TpL~lA~~~G~~~iv~~Ll~~ 595 (848)
.|..|.+||++|....+.+++-+|.-.
T Consensus 718 -~~~~~~~~l~~a~~~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 718 -FDPDGKLPLDIAMEAANADIVLLLRLA 744 (785)
T ss_pred -cCccCcchhhHHhhhccccHHHHHhhh
Confidence 789999999999887777777666444
No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.99 E-value=1.4e-05 Score=79.29 Aligned_cols=66 Identities=35% Similarity=0.479 Sum_probs=40.9
Q ss_pred CCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003097 524 GLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 524 Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~G-A~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~ 595 (848)
+.+||.+|..|||||+.|+..|..+.+.+|+.+| +.+.+ .|..|.+++.+|-+.|+.+++..|.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHH
Confidence 3456666666666666666666666666666666 55555 556666666666666666666666554
No 120
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.87 E-value=5.1e-06 Score=96.84 Aligned_cols=74 Identities=26% Similarity=0.272 Sum_probs=67.8
Q ss_pred CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003097 527 LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 527 in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d-~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~ 605 (848)
+|..|..|+|+||+|+..|..++++.||++|++++. +| ..|+||||-|..+|+.+|+-+|+.+|+...+.+-.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~v------qD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFV------QDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeee------ccccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc
Confidence 688999999999999999999999999999999998 55 57999999999999999999999999887777654
Q ss_pred c
Q 003097 606 L 606 (848)
Q Consensus 606 l 606 (848)
.
T Consensus 119 g 119 (1267)
T KOG0783|consen 119 G 119 (1267)
T ss_pred C
Confidence 4
No 121
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.82 E-value=5.4e-05 Score=89.86 Aligned_cols=130 Identities=12% Similarity=-0.044 Sum_probs=102.9
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc--C--CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHH
Q 003097 465 PEAKDSFFELTLKSKLKEWLLERVVE--G--SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 540 (848)
Q Consensus 465 ~~~~~~Ll~aa~~~~l~e~L~~~L~~--G--a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~ 540 (848)
......++.++.+|+... +.+.|.. . .++|+.|.-|+++||+|..+.+.+++++|+.++..+ ..||.+
T Consensus 23 ~~~e~~fL~a~E~gd~~~-V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~ 94 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPL-VAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLL 94 (822)
T ss_pred chhhHHHHHHHHcCChHH-HHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHH
Confidence 345567888889998873 3333333 2 478889999999999999999999999999987766 348999
Q ss_pred HHHcCCHHHHHHHHHcCCCCC----CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003097 541 AAYYGREKMVVDLLSAGAKPN----LVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 541 Aa~~G~~eiv~~LL~~GA~in----~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~ 602 (848)
|...|..++|++|+.+-.... ..+++...-..+.||+.+|+..++.+|+++|+.+|++....
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 999999999999998744431 11233346678899999999999999999999999886543
No 122
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.81 E-value=0.00021 Score=82.73 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccC
Q 003097 699 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVS 778 (848)
Q Consensus 699 ~aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~r~~rk~~r~lr~~~~~~~~~~ 778 (848)
.-++.||+.||||..|.+|++++.+++.|+ +||.+ ++++.+..||+.+|++++++-+-+-++.-...
T Consensus 697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~-------K~ks~v~el~~~~rg~k~~r~ygk~~~WP~pP----- 763 (1001)
T KOG0164|consen 697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRY-------KLKSYVQELQRRFRGAKQMRDYGKSIRWPAPP----- 763 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-------HHHHHHHHHHHHHHhhhhccccCCCCCCCCCc-----
Confidence 478899999999999999999999999999 88844 56677888999999996655554445544321
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 003097 779 DPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQAKLEYEGLLD 841 (848)
Q Consensus 779 ~q~q~~~~~~~~l~~~Rkq~~~~~~~AvirIQs~~R~~~aRr~~~~lk~~~~~ak~e~~~~~~ 841 (848)
. .++ +....+-.+-..||.....+.+-.-.....++|..+.|++.
T Consensus 764 -------~---~Lr--------~~~~~L~~lf~rwra~~~~~~ipp~~~~qlr~Ki~A~e~lk 808 (1001)
T KOG0164|consen 764 -------L---VLR--------EFEELLRELFIRWRAWQILKSIPPSDKPQLRQKIAASEALK 808 (1001)
T ss_pred -------h---HHH--------HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 0 111 12233334455667766666666666666667777666664
No 123
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.72 E-value=0.00016 Score=63.48 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=67.4
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCCceeEEEEEeCCCCCc
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~~ 375 (848)
+.|..|+|.-+. -|+.|+|.|..|-+. .-.+.||+.+++...|+|..|.|.+|.+.+|..++.|...++ .-
T Consensus 1 P~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G-~~ 71 (81)
T cd00604 1 PLIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDG-VT 71 (81)
T ss_pred CeEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCC-cc
Confidence 358899999875 789999999988651 357899999998889999999999999999999999998666 35
Q ss_pred ccccccccC
Q 003097 376 SQVLNFEYR 384 (848)
Q Consensus 376 Sev~~Fey~ 384 (848)
|+...|+|.
T Consensus 72 Sn~~~f~~l 80 (81)
T cd00604 72 SNGYNFEVL 80 (81)
T ss_pred cCcEeEEEc
Confidence 777778874
No 124
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.61 E-value=0.0002 Score=77.64 Aligned_cols=60 Identities=22% Similarity=0.245 Sum_probs=52.9
Q ss_pred chHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003097 503 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
.-|..||+.|..+.|+.|++.|++||.+|.+...||.+|+.+||+.+|++|+++||-...
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r 97 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR 97 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc
Confidence 446788999999999999999999999999999999999999999999999999987765
No 125
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.58 E-value=0.00013 Score=72.51 Aligned_cols=70 Identities=19% Similarity=0.164 Sum_probs=65.5
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCC-CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 003097 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKP 560 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G-a~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~i 560 (848)
+.++|.+|..|+|+|+.||..|..+++.+|+.+| +.|...|..|.+++.+|-..|+.++|..|-+.-.+-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 5689999999999999999999999999999999 899999999999999999999999999999875443
No 126
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.43 E-value=0.00097 Score=77.46 Aligned_cols=82 Identities=18% Similarity=0.316 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 003097 644 AAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFLN---- 719 (848)
Q Consensus 644 ~~~AA~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQ~~~Rg~~~Rk~f~~---- 719 (848)
...-++.||+.||||.+|.+|++++ ++++.|+ +||.++ ....+..||+.+||++.++.|.+
T Consensus 695 l~~lvtllQK~~RG~~~R~ry~rmk-----------a~~~ii~-wyR~~K---~ks~v~el~~~~rg~k~~r~ygk~~~W 759 (1001)
T KOG0164|consen 695 LPSLVTLLQKAWRGWLARQRYRRMK-----------ASATIIR-WYRRYK---LKSYVQELQRRFRGAKQMRDYGKSIRW 759 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHH-HHHHHH---HHHHHHHHHHHHHhhhhccccCCCCCC
Confidence 4567899999999999999999888 7788887 888654 33578889999999999988743
Q ss_pred ------HHHHHHHHHHH---HHhHHHHHHH
Q 003097 720 ------MRRQAIKIQAA---FRGFQVRKQY 740 (848)
Q Consensus 720 ------~r~aai~IQa~---~Rg~~~Rk~y 740 (848)
++.+.-.+|.. ||.++.++.+
T Consensus 760 P~pP~~Lr~~~~~L~~lf~rwra~~~~~~i 789 (1001)
T KOG0164|consen 760 PAPPLVLREFEELLRELFIRWRAWQILKSI 789 (1001)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45555556665 4444444433
No 127
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.34 E-value=0.00038 Score=75.55 Aligned_cols=60 Identities=20% Similarity=0.174 Sum_probs=55.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003097 535 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 535 ~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~ 600 (848)
+--|..||..|..+.|+.|++.|.++|. .|.....||.+|+..||..++++|+++||--.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~------vD~fD~spL~lAsLcGHe~vvklLLenGAiC~ 96 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNA------VDRFDSSPLYLASLCGHEDVVKLLLENGAICS 96 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcch------hhcccccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence 3468899999999999999999999999 88999999999999999999999999997643
No 128
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=96.98 E-value=0.022 Score=71.81 Aligned_cols=117 Identities=25% Similarity=0.242 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH----HHHHHHHHHHH--HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 003097 678 NIIAALKIQHAFRNFEVRKKMAAAARIQHRF----RSWKVRKEFLN--MRRQAIKIQAAFRGFQVRKQYGKILWSVGVLE 751 (848)
Q Consensus 678 ~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQ~~~----Rg~~~Rk~f~~--~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ 751 (848)
-...+..||+.||++..|+++.++..+|..+ +|++.|+.+.. .-.+++++|..||....|+.|+.....+..+|
T Consensus 744 ~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq 823 (1463)
T COG5022 744 LDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQ 823 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHH
Confidence 3367788888888777777766555544444 34555544332 23477888888888888888888877777777
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 003097 752 KAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKL 827 (848)
Q Consensus 752 ~~~R~~r~~rk~~r~lr~~~~~~~~~~~q~q~~~~~~~~l~~~Rkq~~~~~~~AvirIQs~~R~~~aRr~~~~lk~ 827 (848)
.-+.+.+..+. ....+...++.+.+|++||...+++++..++.
T Consensus 824 ~~i~~~~~~~~---------------------------------~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k 866 (1463)
T COG5022 824 KTIKREKKLRE---------------------------------TEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKK 866 (1463)
T ss_pred HHHHHHHHHhH---------------------------------HHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhh
Confidence 54332211100 01223566899999999999999999998873
No 129
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=96.96 E-value=0.0011 Score=42.79 Aligned_cols=19 Identities=47% Similarity=0.844 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHhHHHHHHH
Q 003097 722 RQAIKIQAAFRGFQVRKQY 740 (848)
Q Consensus 722 ~aai~IQa~~Rg~~~Rk~y 740 (848)
++++.||++|||+++|++|
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~ 20 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRY 20 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4566666666666666655
No 130
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=96.76 E-value=0.0016 Score=73.55 Aligned_cols=76 Identities=21% Similarity=0.198 Sum_probs=66.4
Q ss_pred HHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003097 520 FSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 520 LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~ 599 (848)
+-..|.++-.++.+-.|-||+|+..|+-++|+++|++|..--+ .+.|..|.|+||-|+..++..++.+|++.|+..
T Consensus 885 ~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~ell----d~~de~get~lhkaa~~~~r~vc~~lvdagasl 960 (1004)
T KOG0782|consen 885 THLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELL----DMADETGETALHKAACQRNRAVCQLLVDAGASL 960 (1004)
T ss_pred HHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHH----HHHhhhhhHHHHHHHHhcchHHHHHHHhcchhh
Confidence 4457888889999999999999999999999999999865322 126799999999999999999999999999874
No 131
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.60 E-value=0.0019 Score=79.06 Aligned_cols=89 Identities=18% Similarity=0.104 Sum_probs=74.8
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003097 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.+.+|.++..+... +.++|++ |+++|..|..|.||||.+...|+...+..|+++|++.+..|..|.+||++|...
T Consensus 655 ~~~s~lh~a~~~~~~~--~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSG--AVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred cccchhhhhhccchHH--HHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence 3556777777776554 5566655 999999999999999999999999999999999999999999999999999888
Q ss_pred CCHHHHHHHHHc
Q 003097 545 GREKMVVDLLSA 556 (848)
Q Consensus 545 G~~eiv~~LL~~ 556 (848)
.+.+++-+|...
T Consensus 733 ~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 733 ANADIVLLLRLA 744 (785)
T ss_pred ccccHHHHHhhh
Confidence 777776655443
No 132
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.48 E-value=0.04 Score=62.33 Aligned_cols=71 Identities=24% Similarity=0.261 Sum_probs=58.1
Q ss_pred HHHHHHHHHCCCCCccc------cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChH
Q 003097 514 TWAILLFSWSGLSLDFR------DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDG 587 (848)
Q Consensus 514 ~~~v~~LL~~Ga~in~~------D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~ 587 (848)
...|++|.+++++.|.. |..-.|+||+|+..|..++|..||+.|+|+.+ +|..|.||.+++. +.+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~---nkd 474 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA---NKD 474 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc---cHH
Confidence 56788999998887653 44567999999999999999999999988877 8999999999987 445
Q ss_pred HHHHHH
Q 003097 588 LAAFLS 593 (848)
Q Consensus 588 iv~~Ll 593 (848)
+-..++
T Consensus 475 Vk~~F~ 480 (591)
T KOG2505|consen 475 VKSIFI 480 (591)
T ss_pred HHHHHH
Confidence 544443
No 133
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=96.45 E-value=0.0042 Score=40.06 Aligned_cols=20 Identities=25% Similarity=0.549 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhHHHHHHHHH
Q 003097 804 RSVVRVQSMFRSKKAQEEYR 823 (848)
Q Consensus 804 ~AvirIQs~~R~~~aRr~~~ 823 (848)
+|++.||+.||++++|++|+
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999985
No 134
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=96.32 E-value=0.0015 Score=75.60 Aligned_cols=208 Identities=16% Similarity=0.226 Sum_probs=124.0
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC-CCceeEEEEEeCCCCCc
Q 003097 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-~~G~Vpl~v~~~~~~~~ 375 (848)
.|.|+.|..+...+|++|+..|.++.. ......+|..+...-++|+. .+|.|.+.++.-...+-
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~~~~ 308 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSETSD 308 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecccccccc
Confidence 689999999999999999999999854 55667889999999999888 59999999886443332
Q ss_pred ccccccccCC----CCCccCCCCccccchhhHHHHHHHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHH
Q 003097 376 SQVLNFEYRS----PQLHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWA 451 (848)
Q Consensus 376 Sev~~Fey~~----~~~~~~~~~~~~~~~~~e~~l~~Rl~~LL~~~~~~l~il~~k~~~~~l~e~~~~~~~i~~~~~~~~ 451 (848)
+..-.-+... +.++.+.++.+. .++.++ ++++|.++.+. +.++...+..
T Consensus 309 ~~~~~~~~~~~~~~~~i~~yvp~t~~--------q~~~~a---------l~ivg~n~~~~-l~~a~~~~~~--------- 361 (605)
T KOG3836|consen 309 SNNSNSSPPTSSSTKAIFTYVPSTDR--------QLIEYA---------LQIVGLNMNGK-LEDARNIANS--------- 361 (605)
T ss_pred ccccccCCccCCCcccceeeecCCCc--------eeeeeE---------EEEecccccCc-hhhhcCCccc---------
Confidence 2222222222 224455544442 122222 78888888776 4444433200
Q ss_pred HHHHHhCCCCCCcccccchHHHHHHcCCcHHHHHHHHHcCCC-CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccc
Q 003097 452 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVEGSK-TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR 530 (848)
Q Consensus 452 ~l~~~l~~~~~~~~~~~~~Ll~aa~~~~l~e~L~~~L~~Ga~-in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~ 530 (848)
.+.............+...++.- .....+.. ++. -...++ |+..+....+-.|+++|+.++..
T Consensus 362 ----s~~~~~~~~~~n~~~~s~~aI~~-------~~~~~~~s~~~l----Sl~~~~-~~~~~~ss~v~~lik~~~~~~~~ 425 (605)
T KOG3836|consen 362 ----SLSPTSPMMNNNSEQLSPYAIMS-------QKPTNNLSTVNL----SLCDVR-AALNNSSSLVFTLIKKGAHPNDD 425 (605)
T ss_pred ----cCCCCCcceeccccccCccceee-------ecCCCCCCccce----eeehhh-hhhcCCccceeeeecccCccchh
Confidence 00000000000111111111100 00000000 000 011122 66667777777888899999999
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003097 531 DKYGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 531 D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
|..|.||+|+++..|..++...++....+.+.
T Consensus 426 d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~ 457 (605)
T KOG3836|consen 426 DKFGFTPLHIPQISGDPRIIQLLLNCKVAISL 457 (605)
T ss_pred cccccccccccCCCCCHHHhhhhhhhhhhhhc
Confidence 99999999999999999999888876555554
No 135
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.13 E-value=0.0091 Score=39.36 Aligned_cols=28 Identities=46% Similarity=0.492 Sum_probs=19.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003097 534 GWTALHWAAYYGREKMVVDLLSAGAKPN 561 (848)
Q Consensus 534 G~TpLh~Aa~~G~~eiv~~LL~~GA~in 561 (848)
|.||||+|+..|+.++++.|+..|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5677777777777777777777666543
No 136
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=95.97 E-value=0.028 Score=51.49 Aligned_cols=82 Identities=18% Similarity=0.148 Sum_probs=66.0
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC-------eecceeee----eCCeeeeecCCC------C
Q 003097 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-------VRVPAEFV----QAGVYRCFLPPH------S 359 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~-------~~vpa~~~----~~gvl~C~~Pph------~ 359 (848)
.|..++-..++..||-+|.++|.++.- ....+.|++ .++-+.+- ....++|-+||- .
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k------~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK------PDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC------CCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 588999999999999999999987642 368899998 55544432 556799999987 5
Q ss_pred CceeEEEEEeCCCCCcccccccccC
Q 003097 360 PGLFLLYMSLDGHKPISQVLNFEYR 384 (848)
Q Consensus 360 ~G~Vpl~v~~~~~~~~Sev~~Fey~ 384 (848)
|=.|+|++...++..+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 6778888888766789999999995
No 137
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=95.93 E-value=0.023 Score=51.61 Aligned_cols=82 Identities=21% Similarity=0.167 Sum_probs=60.8
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe--------e----cceeeeeCCeeeeecCCC----
Q 003097 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV--------R----VPAEFVQAGVYRCFLPPH---- 358 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~--------~----vpa~~~~~gvl~C~~Pph---- 358 (848)
++.|.+.|-.-++.+||-||.++|.++.. ...+.|-+. + +..+.++...|+|-+||-
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 46799999999999999999999987743 234555421 1 223345678899999998
Q ss_pred --CCceeEEEEEeCCCCCcccccccccC
Q 003097 359 --SPGLFLLYMSLDGHKPISQVLNFEYR 384 (848)
Q Consensus 359 --~~G~Vpl~v~~~~~~~~Sev~~Fey~ 384 (848)
.|=.|.|++....+ ..|+...|+|.
T Consensus 74 I~~pV~V~~~l~~~~~-~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGKR-KRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCCC-CcCCCCCcEec
Confidence 56677777765544 68999999995
No 138
>PTZ00014 myosin-A; Provisional
Probab=95.92 E-value=0.016 Score=71.56 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003097 723 QAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRW 757 (848)
Q Consensus 723 aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~ 757 (848)
.+..||++||||+.|++|++.+.++++||+.||+|
T Consensus 779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~ 813 (821)
T PTZ00014 779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRH 813 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555555555555555555555
No 139
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=95.70 E-value=0.035 Score=48.81 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=55.4
Q ss_pred eEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC-----------CCceeEEEEEeCCCCCcccccc
Q 003097 312 TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-----------SPGLFLLYMSLDGHKPISQVLN 380 (848)
Q Consensus 312 ~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-----------~~G~Vpl~v~~~~~~~~Sev~~ 380 (848)
.-+-++|.+|.. ++.+-||++++-+.+=.+-.|.|.+|+- .|..||+.+...++..=+--..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 667889999965 7999999999998888888999999987 6789999999988865565667
Q ss_pred cccC
Q 003097 381 FEYR 384 (848)
Q Consensus 381 Fey~ 384 (848)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 7774
No 140
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=95.56 E-value=0.015 Score=39.50 Aligned_cols=21 Identities=57% Similarity=0.868 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHH
Q 003097 721 RRQAIKIQAAFRGFQVRKQYG 741 (848)
Q Consensus 721 r~aai~IQa~~Rg~~~Rk~y~ 741 (848)
..++++||+.|||+.+|++|+
T Consensus 3 ~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 3 TRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 457777888888888887773
No 141
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=95.29 E-value=0.24 Score=62.61 Aligned_cols=145 Identities=20% Similarity=0.209 Sum_probs=86.7
Q ss_pred HHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHHHH---------HHHHHHHHHHHHHHHHHHHH
Q 003097 649 ARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMA---------AAARIQHRFRSWKVRKEFLN 719 (848)
Q Consensus 649 ~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~---------aA~~IQ~~~Rg~~~Rk~f~~ 719 (848)
.+-++.+|+.+.+....-+. .+..-....-...|...|+...+.... --.++|+..||+..|..|..
T Consensus 481 ~k~~~~~~~~l~~~~~~~~~----ee~~~~~~~~is~q~~v~~i~~~~~l~~~~~s~~~s~~~~~qa~~rg~~~r~~~~~ 556 (1401)
T KOG2128|consen 481 MKWLAYIYGNLVREAKKWLL----EELHFEYSSLISLQALVRGIVLRSALFSLYPSLGKSEKLRIQASERGFSTRNKFRS 556 (1401)
T ss_pred hhhHHHhhhhhhhhhhcccc----HHHHHHHHHHhhHHHHhhhhHHHhhHHHHhhhhccccchhhhhhccccchHHHHHh
Confidence 56677777777765443322 111111222222555555554443211 23345888898887777654
Q ss_pred HHH-------HHHHHHHHHHhHHH---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCchhHH
Q 003097 720 MRR-------QAIKIQAAFRGFQV---RK-QYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEE 788 (848)
Q Consensus 720 ~r~-------aai~IQa~~Rg~~~---Rk-~y~~~~~aa~~IQ~~~R~~r~~rk~~r~lr~~~~~~~~~~~q~q~~~~~~ 788 (848)
... .+..||+.|||+.. +. ........++.+|++.|+. ..|+.+
T Consensus 557 ~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~-lsrk~~------------------------ 611 (1401)
T KOG2128|consen 557 RLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGA-LSRKKY------------------------ 611 (1401)
T ss_pred hhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHH-HHHhhH------------------------
Confidence 332 67789999999884 11 2223334788888888888 333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 003097 789 DFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMK 826 (848)
Q Consensus 789 ~~l~~~Rkq~~~~~~~AvirIQs~~R~~~aRr~~~~lk 826 (848)
.+ +.+.+.....+++.||+.+|...+|..|+.+.
T Consensus 612 --~~--~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~ 645 (1401)
T KOG2128|consen 612 --SR--KLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLF 645 (1401)
T ss_pred --HH--HHHHHHHhhhhHHHHHHHHHhcccchHHHHHh
Confidence 11 23344466788899999999999998888874
No 142
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=95.23 E-value=0.059 Score=67.84 Aligned_cols=92 Identities=24% Similarity=0.239 Sum_probs=62.9
Q ss_pred HHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHH--HH------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 003097 650 RIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEV--RK------KMAAAARIQHRFRSWKVRKEFLNMR 721 (848)
Q Consensus 650 ~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~--r~------~~~aA~~IQ~~~Rg~~~Rk~f~~~r 721 (848)
++|+..||+..|..+...- +-..+..-....||..||+++. -+ ...-++.+|++.||+..|+.+.+..
T Consensus 540 ~~qa~~rg~~~r~~~~~~~----~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~ 615 (1401)
T KOG2128|consen 540 RIQASERGFSTRNKFRSRL----DFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKL 615 (1401)
T ss_pred hhhhhccccchHHHHHhhh----hHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 4488888888877664322 2233355667778888887773 11 1236778888888888887776554
Q ss_pred H-------HHHHHHHHHHhHHHHHHHHHHHH
Q 003097 722 R-------QAIKIQAAFRGFQVRKQYGKILW 745 (848)
Q Consensus 722 ~-------aai~IQa~~Rg~~~Rk~y~~~~~ 745 (848)
+ .+++||+++|+...|+.|+.+..
T Consensus 616 q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~~ 646 (1401)
T KOG2128|consen 616 QYFKDNMTKIIKIQSKIRKFPNRKDYKLLFT 646 (1401)
T ss_pred HHHHHhhhhHHHHHHHHHhcccchHHHHHhc
Confidence 3 77888888888888888877664
No 143
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.13 E-value=0.05 Score=67.67 Aligned_cols=88 Identities=17% Similarity=0.145 Sum_probs=73.5
Q ss_pred CCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-ecceeeeeCCe-eeeecCCCCC-ceeEEEEE
Q 003097 292 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGV-YRCFLPPHSP-GLFLLYMS 368 (848)
Q Consensus 292 ~~~~~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~-~vpa~~~~~gv-l~C~~Pph~~-G~Vpl~v~ 368 (848)
.-+-+.|.++.|.|||..|||+|+++|+++-. .+...|++|+. +-+....+++. ++|..|+..+ +.-|+.|.
T Consensus 139 s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~ 213 (1025)
T KOG3610|consen 139 SLQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVS 213 (1025)
T ss_pred eecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEE
Confidence 35677899999999999999999999999865 56799999998 77777788887 9999999864 88888888
Q ss_pred eCCCCCccc-ccccccCC
Q 003097 369 LDGHKPISQ-VLNFEYRS 385 (848)
Q Consensus 369 ~~~~~~~Se-v~~Fey~~ 385 (848)
.+... +.. ...|+|..
T Consensus 214 f~~~~-~~~~~~~f~y~~ 230 (1025)
T KOG3610|consen 214 FDRTP-QKLTPLAFNYTA 230 (1025)
T ss_pred ecccc-cccCCCCccccc
Confidence 87664 444 57788876
No 144
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.97 E-value=0.039 Score=36.15 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=26.4
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCc
Q 003097 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLD 528 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in 528 (848)
.|.||||+|+..|..++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998765
No 145
>PTZ00014 myosin-A; Provisional
Probab=94.93 E-value=0.06 Score=66.73 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 003097 699 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQ 739 (848)
Q Consensus 699 ~aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~~Rk~ 739 (848)
..++.||++||||+.|++|++++.+++.||++||+|+.++.
T Consensus 778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE 818 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 37889999999999999999999999999999999998864
No 146
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=94.85 E-value=0.11 Score=47.38 Aligned_cols=82 Identities=11% Similarity=0.045 Sum_probs=59.6
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-------ec-----ceeeeeCCeeeeecCCC------
Q 003097 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-------RV-----PAEFVQAGVYRCFLPPH------ 358 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~-------~v-----pa~~~~~gvl~C~~Pph------ 358 (848)
.|.+++=.-|++.||.||.+++.... +-...+.|-+. +. ++.+-....+++-+||-
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~------K~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQ------KEDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccC------CCCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 69999999999999999999998653 22455555442 11 23344456699999997
Q ss_pred CCceeEEEEEeCCCCCcccccccccC
Q 003097 359 SPGLFLLYMSLDGHKPISQVLNFEYR 384 (848)
Q Consensus 359 ~~G~Vpl~v~~~~~~~~Sev~~Fey~ 384 (848)
.|=.|-+++.......+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 45566677777555579999999995
No 147
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=94.63 E-value=0.036 Score=37.66 Aligned_cols=21 Identities=33% Similarity=0.248 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHhhhHHHHHH
Q 003097 644 AAEAAARIQAAFREHSLKVQT 664 (848)
Q Consensus 644 ~~~AA~~IQ~~~R~~~~Rkr~ 664 (848)
...+|+.||++|||++.|++|
T Consensus 2 ~~~aa~~IQa~~Rg~~~r~~y 22 (26)
T smart00015 2 LTRAAIIIQAAWRGYLARKRY 22 (26)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 356788888888888888776
No 148
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.95 E-value=0.094 Score=59.50 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=42.3
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003097 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
.|..--|+||+|+..|...+|..||+.|+|+...|..|.||..+++
T Consensus 426 ~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 426 NDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred cccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 4455679999999999999999999999999999999999999876
No 149
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.48 E-value=0.13 Score=61.93 Aligned_cols=87 Identities=16% Similarity=0.072 Sum_probs=61.8
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCc----------cccCCCC
Q 003097 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD----------FRDKYGW 535 (848)
Q Consensus 467 ~~~~Ll~aa~~~~l~e~L~~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in----------~~D~~G~ 535 (848)
+.+.++.+..+.+++ +.++|.+ +..+ ..+|-+|...|+.++|++++.+-.... ..-.-+-
T Consensus 62 Gr~al~iai~nenle--~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~di 132 (822)
T KOG3609|consen 62 GRLALHIAIDNENLE--LQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDI 132 (822)
T ss_pred hhhceecccccccHH--HHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCc
Confidence 444555554455554 6666554 3333 356777899999999999997633221 1223478
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003097 536 TALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 536 TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
|||.+||..++.+|+++||..|+.+-.
T Consensus 133 tPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 133 TPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred cHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 999999999999999999999999876
No 150
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=90.25 E-value=17 Score=43.82 Aligned_cols=48 Identities=17% Similarity=0.196 Sum_probs=25.3
Q ss_pred HHHHHhhhHHHHHHHHhhcCCh------HHHHHHHHHHHHHHHHHhhHHHHHHH
Q 003097 651 IQAAFREHSLKVQTKAIRFSSP------EEEAQNIIAALKIQHAFRNFEVRKKM 698 (848)
Q Consensus 651 IQ~~~R~~~~Rkr~~~~~~~~~------~~~~~~~~Aa~~IQ~~~R~~~~r~~~ 698 (848)
|=+-+..|+.+.|..+.+++.. ..-+=+..++.++|++.|||++|+++
T Consensus 779 lv~kVn~WLv~sRWkk~q~~a~sVIKLkNkI~yRae~v~k~Q~~~Rg~L~rkr~ 832 (1259)
T KOG0163|consen 779 LVAKVNKWLVRSRWKKSQYGALSVIKLKNKIIYRAECVLKAQRIARGYLARKRH 832 (1259)
T ss_pred HHHHHHHHHHHhHHHHhhhhhhheeehhhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3344677888888877775541 11112223344555555555555443
No 151
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=84.99 E-value=2.3 Score=44.20 Aligned_cols=95 Identities=14% Similarity=0.065 Sum_probs=66.6
Q ss_pred CCchHHHHHHcCCHHHHHHHHHCCCCCccccC----CCCcHHHHHHHc--CCHHHHHHHHHcC-CCCCCCCCCCCCCCCC
Q 003097 501 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK----YGWTALHWAAYY--GREKMVVDLLSAG-AKPNLVTDPTSQNPGG 573 (848)
Q Consensus 501 G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~----~G~TpLh~Aa~~--G~~eiv~~LL~~G-A~in~~td~~~~d~~G 573 (848)
-.++|-+|..++...++.+|+.+ .+....|. .+.--+-++... -...+.+.+|..| +++|. +-.+-..|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~---~F~~~NSG 254 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNK---KFQKVNSG 254 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccch---hhhccCCc
Confidence 35788888888888888888854 11111111 122234444333 4677888888888 55664 33456789
Q ss_pred CCHHHHHHHcCChHHHHHHHhhhhhh
Q 003097 574 LNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 574 ~TpL~lA~~~G~~~iv~~Ll~~Ga~~ 599 (848)
.|-|+-|..++..+++.+|+++||..
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999999999853
No 152
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=74.46 E-value=4.2 Score=48.59 Aligned_cols=65 Identities=26% Similarity=0.389 Sum_probs=44.0
Q ss_pred cccccCccccccCCCcchHHhhhhhccCCee--eE---EEeeeccCCCCCcceeeeeeccCCC---------CceEEEEe
Q 003097 4 NFRKDGHNWKKKKDGKTVKEAHEHLKVGNEE--RI---HVYYAHGEDSPTFVRRCYWLLDKTL---------ENIVLVHY 69 (848)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 69 (848)
+|-.|||.|-- -|.=....|.|.. +. ++|+-=+|.....-||.|.|+-... ++.+||||
T Consensus 78 ~fasDGy~wad-------~E~~y~~~~~G~~lEi~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY 150 (669)
T PF08549_consen 78 NFASDGYVWAD-------PEQAYTHEVNGYTLEIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHY 150 (669)
T ss_pred cCCCCcceecC-------hhheeeecCCCeEEEEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEe
Confidence 58899999975 2444445554432 22 1344435677789999999996544 67899999
Q ss_pred eecCCC
Q 003097 70 RETHEG 75 (848)
Q Consensus 70 ~~~~~~ 75 (848)
..-...
T Consensus 151 ~~a~~~ 156 (669)
T PF08549_consen 151 GPAPPQ 156 (669)
T ss_pred cCCCcc
Confidence 877653
No 153
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=71.66 E-value=6.2 Score=48.51 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 003097 798 AEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQA 832 (848)
Q Consensus 798 ~~~~~~~AvirIQs~~R~~~aRr~~~~lk~~~~~a 832 (848)
.+++..++++.||++||++.+|++.+.+-+++=-+
T Consensus 24 e~rk~e~~av~vQs~~Rg~~~r~~~~~~~R~~fd~ 58 (1001)
T KOG0942|consen 24 EERKQEKNAVKVQSFWRGFRVRHNQKLLFREEFDA 58 (1001)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677889999999999999999888876665333
No 154
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=70.79 E-value=7.5 Score=40.56 Aligned_cols=48 Identities=25% Similarity=0.215 Sum_probs=40.6
Q ss_pred CHHHHHHHHHCC-CCCcc---ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 003097 513 YTWAILLFSWSG-LSLDF---RDKYGWTALHWAAYYGREKMVVDLLSAGAKP 560 (848)
Q Consensus 513 ~~~~v~~LL~~G-a~in~---~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~i 560 (848)
...+++..|.+| +++|. +-..|.|-|.-|..++..+++++||++||-.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 467888888888 67775 3457999999999999999999999999853
No 155
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=69.82 E-value=12 Score=44.90 Aligned_cols=45 Identities=29% Similarity=0.444 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 003097 698 MAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILW 745 (848)
Q Consensus 698 ~~aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~~Rk~y~~~~~ 745 (848)
...|.+||+.||.+.+|++|.++|.-+.++ .-|.+.|++|.-.|.
T Consensus 696 d~~A~~IQkAWRrfv~rrky~k~ree~t~l---l~gKKeRRr~Si~R~ 740 (1106)
T KOG0162|consen 696 DGMARRIQKAWRRFVARRKYEKMREEATKL---LLGKKERRRYSINRN 740 (1106)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHHH
Confidence 348999999999999999999999877654 346777777755543
No 156
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=69.05 E-value=56 Score=44.53 Aligned_cols=40 Identities=28% Similarity=0.463 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHH---HHHHHHHHHHHH
Q 003097 718 LNMRRQAIKIQAAFRGFQVRKQYGKILW---SVGVLEKAILRW 757 (848)
Q Consensus 718 ~~~r~aai~IQa~~Rg~~~Rk~y~~~~~---aa~~IQ~~~R~~ 757 (848)
..+..-++.+|+.+|||.+|+.|.+... ++.+||+.+|.|
T Consensus 770 ~~ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~ 812 (1930)
T KOG0161|consen 770 EKLSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAY 812 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344456667777777777777755543 666777776666
No 157
>KOG0165 consensus Microtubule-associated protein Asp [Cytoskeleton]
Probab=69.02 E-value=2.5e+02 Score=34.56 Aligned_cols=139 Identities=23% Similarity=0.239 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 003097 678 NIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAI 754 (848)
Q Consensus 678 ~~~Aa~~IQ~~~R~~~~r~---~~~aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~ 754 (848)
+..++.++|..+.....+. ...++..+|..-..+..+..|-....++..+|++.+.|+.+.-|.-...++...|+..
T Consensus 147 q~~~~~~~~k~~~~~~~~~~~v~k~~~~~~~~~~~~~~~~~DfG~q~~a~~tl~Sy~~~WL~~~L~~IF~~~~~~~~khl 226 (1023)
T KOG0165|consen 147 QSRAAVTIQKAFCRMVTRKLETQKCAALRIQFFLQMAVYRRDFGQQKRAAITLQSYFRTWLTRKLFLIFRKAAVVLQKHL 226 (1023)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHhhhHHHhhhchhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhccchhcCcHHH
Confidence 3345555555544333222 1226777777777777888888888899999999999998888866665555555442
Q ss_pred HHHHHHHHHHhhhhhhh--------hhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 003097 755 LRWRLKRKGFRGLQVDR--------VEVEAVSDPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRR 824 (848)
Q Consensus 755 R~~r~~rk~~r~lr~~~--------~~~~~~~~q~q~~~~~~~~l~~~Rkq~~~~~~~AvirIQs~~R~~~aRr~~~~ 824 (848)
-.+ .+.-....+.... .......+| .+++.+--+....+...-++.||+.|+.+.+-..|.-
T Consensus 227 M~k-L~~f~s~~~FS~ptmlk~y~~~~s~~~ii~-------~~~kEAL~k~~L~~i~~L~~~I~~A~~~~~~~~~~~I 296 (1023)
T KOG0165|consen 227 MHK-LRAFLSAKHFSQPTMLKVYLQIRSSVIIIQ-------ARSKEALQKRKLQEIKNLTIKIQAAWRRYRAKKYLCI 296 (1023)
T ss_pred HHH-HHHHHHHHHhcCchHHHHHHHhccCceeec-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 111 1111111111100 000001111 1112221233444666788899999998877666543
No 158
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=68.22 E-value=7.1 Score=46.16 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=36.3
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCc
Q 003097 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT 536 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~T 536 (848)
|..++..|..|.+|+|+++..|..+++..++..-.+++.....|.+
T Consensus 419 ~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 419 GAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred cCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 6778888999999999999999999999888665555544444443
No 159
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=63.76 E-value=8 Score=48.91 Aligned_cols=76 Identities=21% Similarity=0.187 Sum_probs=51.7
Q ss_pred CCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC--eecceeeeeCCeeeeecCCCC--CceeEEEEE
Q 003097 293 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE--VRVPAEFVQAGVYRCFLPPHS--PGLFLLYMS 368 (848)
Q Consensus 293 ~~~~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~--~~vpa~~~~~gvl~C~~Pph~--~G~Vpl~v~ 368 (848)
-+.++|++++|.-++.+||+.++|.|.++...-+....+..+ =|- .+++.+..-..-+.|..-++. ||.|.+.|-
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~V-a~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~ 125 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKV-AGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVG 125 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceE-eeeecCCCccccccccceeeccCCCCCCCCceeEEec
Confidence 457779999999999999999999999986532211112111 111 224444455566888888775 798888887
Q ss_pred e
Q 003097 369 L 369 (848)
Q Consensus 369 ~ 369 (848)
.
T Consensus 126 ~ 126 (1025)
T KOG3610|consen 126 V 126 (1025)
T ss_pred c
Confidence 3
No 160
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=61.50 E-value=21 Score=43.13 Aligned_cols=34 Identities=41% Similarity=0.503 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 003097 676 AQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSW 711 (848)
Q Consensus 676 ~~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQ~~~Rg~ 711 (848)
.++++||..||+.||+|.+|++ ++..||.-|+..
T Consensus 27 rrr~~aa~~iq~~lrsyl~Rkk--~~~~I~~e~d~~ 60 (1096)
T KOG4427|consen 27 RRREAAALFIQRVLRSYLVRKK--AQIEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHh
Confidence 3556777777777777777764 566666666554
No 161
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=59.55 E-value=18 Score=44.75 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003097 694 VRKKMAAAARIQHRFRSWKVRKEFLNMRR 722 (848)
Q Consensus 694 ~r~~~~aA~~IQ~~~Rg~~~Rk~f~~~r~ 722 (848)
.|++.++|+.+|+.|||++.|++++..-+
T Consensus 25 ~rk~e~~av~vQs~~Rg~~~r~~~~~~~R 53 (1001)
T KOG0942|consen 25 ERKQEKNAVKVQSFWRGFRVRHNQKLLFR 53 (1001)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 45566688888888888888877665443
No 162
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=58.92 E-value=26 Score=42.48 Aligned_cols=35 Identities=43% Similarity=0.526 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 003097 694 VRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGF 734 (848)
Q Consensus 694 ~r~~~~aA~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~ 734 (848)
+|++.+||+.||+.+|||..|++|+ +.||.-|+..
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk~~------~~I~~e~d~~ 60 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKKAQ------IEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHh
Confidence 4556679999999999999988865 4566555433
No 163
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=54.86 E-value=22 Score=42.90 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 003097 790 FYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQ 831 (848)
Q Consensus 790 ~l~~~Rkq~~~~~~~AvirIQs~~R~~~aRr~~~~lk~~~~~ 831 (848)
.+.++|.+.+ .--+.+||..||.+.+||+|.++|.++-.
T Consensus 686 ~LEemRer~~---d~~A~~IQkAWRrfv~rrky~k~ree~t~ 724 (1106)
T KOG0162|consen 686 LLEEMRERKW---DGMARRIQKAWRRFVARRKYEKMREEATK 724 (1106)
T ss_pred HHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555544 34678999999999999999999987654
No 164
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=54.04 E-value=5.2e+02 Score=32.04 Aligned_cols=24 Identities=17% Similarity=0.105 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHH
Q 003097 643 TAAEAAARIQAAFREHSLKVQTKA 666 (848)
Q Consensus 643 ~~~~AA~~IQ~~~R~~~~Rkr~~~ 666 (848)
-...+++++|++.|||++|+|+..
T Consensus 811 yRae~v~k~Q~~~Rg~L~rkr~~~ 834 (1259)
T KOG0163|consen 811 YRAECVLKAQRIARGYLARKRHRP 834 (1259)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhch
Confidence 346789999999999999998854
No 165
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=52.08 E-value=8.5e+02 Score=33.97 Aligned_cols=43 Identities=23% Similarity=0.165 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHH
Q 003097 643 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFE 693 (848)
Q Consensus 643 ~~~~AA~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~ 693 (848)
....-.+.+|+.+|||++|+.|.+. ..+..|+..||+..|.|.
T Consensus 771 ~ls~ii~~fQA~~Rg~l~r~~~~kr--------~~~~~ai~~iQ~N~r~~~ 813 (1930)
T KOG0161|consen 771 KLSQIITLFQAAIRGYLARKEFKKR--------LQQLDAIKVIQRNIRAYL 813 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH
Confidence 3466778889999999999888543 366678888888776654
No 166
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=51.64 E-value=23 Score=36.02 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=26.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003097 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll 593 (848)
|.+|+..|-...+--.+++|.+++. ++|..|+.++|..|+.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------------HHHHHHHHhhHHHHHHHhh
Confidence 4556666666666666666666653 3566666666666666554
No 167
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=47.55 E-value=45 Score=29.41 Aligned_cols=64 Identities=20% Similarity=0.148 Sum_probs=39.3
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC-eecceee-eeCCeeee--ecCCC-CCceeEEEEE
Q 003097 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVPAEF-VQAGVYRC--FLPPH-SPGLFLLYMS 368 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlv~G~~~~~~~~~~~~~~~c~FG~-~~vpa~~-~~~gvl~C--~~Pph-~~G~Vpl~v~ 368 (848)
..|.-++|.---..++++|+|.|.+|.. .+.||. ++|.... -.++-++- .++.. .||..++.+-
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred CeEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 4689999999999999999999999944 256665 5554432 23333222 33333 4677776663
No 168
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=47.31 E-value=35 Score=38.90 Aligned_cols=20 Identities=35% Similarity=0.476 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003097 698 MAAAARIQHRFRSWKVRKEF 717 (848)
Q Consensus 698 ~~aA~~IQ~~~Rg~~~Rk~f 717 (848)
.+||+.||+|||+|.+|.+.
T Consensus 17 ikaAilIQkWYRr~~ARle~ 36 (631)
T KOG0377|consen 17 IKAAILIQKWYRRYEARLEA 36 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45666667777766666553
No 169
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=45.87 E-value=29 Score=29.81 Aligned_cols=47 Identities=13% Similarity=0.027 Sum_probs=28.9
Q ss_pred chHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003097 503 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSA 556 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~ 556 (848)
..|..|...|+.++++.+++.+ .++ ...|..|....+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4456667777777777666544 221 3466677777777777776653
No 170
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=43.19 E-value=66 Score=31.47 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=51.5
Q ss_pred eccCCccCCCCeEEEEECc-CCCCcccCCCcceEEEcCC----e-ecceeeeeCCeeeeecCCC---CCceeEEEEEeCC
Q 003097 301 VSPAWAFSNEKTKILVTGF-FHKDCLHLSKSNMFCVCGE----V-RVPAEFVQAGVYRCFLPPH---SPGLFLLYMSLDG 371 (848)
Q Consensus 301 ~sP~w~~~~gg~kVlv~G~-~~~~~~~~~~~~~~c~FG~----~-~vpa~~~~~gvl~C~~Pph---~~G~Vpl~v~~~~ 371 (848)
+-|.--.++.. ||.|+=. .+.. ...+.|.|-. + .+++.+|.+-|++..+|.. -+|.|.+.|.|++
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~l~~-----~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g 76 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDPLDE-----EDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDG 76 (142)
T ss_pred ecCceeecCCC-EEEEEEeCCCCC-----CCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECC
Confidence 45777788888 8877654 3221 2356777755 3 5888899999999999999 8999999999987
Q ss_pred CCC
Q 003097 372 HKP 374 (848)
Q Consensus 372 ~~~ 374 (848)
-..
T Consensus 77 ~~~ 79 (142)
T PF14545_consen 77 VSL 79 (142)
T ss_pred EEE
Confidence 543
No 171
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=40.87 E-value=42 Score=28.81 Aligned_cols=46 Identities=24% Similarity=0.304 Sum_probs=28.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003097 537 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 537 pLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~ 595 (848)
-|..|...|+.++++.+++.+ .++. ..+..|....+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~~------------~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPDN------------DCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccHH------------HHHHHHHHHhhHHHHHHHHHh
Confidence 456677777777777666554 2221 246667777777777776665
No 172
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=35.97 E-value=71 Score=36.58 Aligned_cols=25 Identities=28% Similarity=0.411 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHH
Q 003097 801 RVERSVVRVQSMFRSKKAQEEYRRM 825 (848)
Q Consensus 801 ~~~~AvirIQs~~R~~~aRr~~~~l 825 (848)
+-.+|++.||.++|+++||.+.++.
T Consensus 15 raikaAilIQkWYRr~~ARle~rrr 39 (631)
T KOG0377|consen 15 RAIKAAILIQKWYRRYEARLEARRR 39 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4468999999999999999887764
No 173
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=33.03 E-value=16 Score=30.19 Aligned_cols=9 Identities=44% Similarity=1.032 Sum_probs=5.5
Q ss_pred ccCcccccc
Q 003097 7 KDGHNWKKK 15 (848)
Q Consensus 7 ~~~~~~~~~ 15 (848)
.|||.|||=
T Consensus 2 ~Dgy~WRKY 10 (60)
T PF03106_consen 2 DDGYRWRKY 10 (60)
T ss_dssp -SSS-EEEE
T ss_pred CCCCchhhc
Confidence 488888864
No 174
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=30.23 E-value=20 Score=29.64 Aligned_cols=9 Identities=44% Similarity=1.047 Sum_probs=7.1
Q ss_pred ccCcccccc
Q 003097 7 KDGHNWKKK 15 (848)
Q Consensus 7 ~~~~~~~~~ 15 (848)
.|||.|||=
T Consensus 2 ~DGy~WRKY 10 (59)
T smart00774 2 DDGYQWRKY 10 (59)
T ss_pred CCccccccc
Confidence 589999864
No 175
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=29.98 E-value=1.9e+02 Score=30.36 Aligned_cols=64 Identities=16% Similarity=0.203 Sum_probs=49.6
Q ss_pred CCCeEEEEECcCCCCccc--------CCCcceEEEcCCeecceeeeeCCeeeeecCCC-CCceeEEEEEeCCC
Q 003097 309 NEKTKILVTGFFHKDCLH--------LSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGH 372 (848)
Q Consensus 309 ~gg~kVlv~G~~~~~~~~--------~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-~~G~Vpl~v~~~~~ 372 (848)
.-|.=|+|.|++|..... ..-.+.++.|+++.+|-.+++++=+.+.+|.. .+|.+.+.|...+.
T Consensus 3 APG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~ 75 (215)
T TIGR03437 3 APGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGG 75 (215)
T ss_pred CCCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCc
Confidence 346678888888864110 01246789999999999999999999999977 58999999987654
No 176
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=29.47 E-value=68 Score=23.67 Aligned_cols=18 Identities=50% Similarity=0.578 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003097 699 AAAARIQHRFRSWKVRKE 716 (848)
Q Consensus 699 ~aA~~IQ~~~Rg~~~Rk~ 716 (848)
-|+..||-.||.++.|+.
T Consensus 10 YAt~lI~dyfr~~K~rk~ 27 (35)
T PF08763_consen 10 YATLLIQDYFRQFKKRKE 27 (35)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 477788888888887775
No 177
>KOG0165 consensus Microtubule-associated protein Asp [Cytoskeleton]
Probab=28.60 E-value=1e+03 Score=29.78 Aligned_cols=98 Identities=20% Similarity=0.243 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhhcCC---hHHHHHHHHHHHHHHHHHhhHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 003097 643 TAAEAAARIQAAFREHSLKVQTKAIRFSS---PEEEAQNIIAALKIQHAFRNFEVRKKMA---AAARIQHRFRSWKVRKE 716 (848)
Q Consensus 643 ~~~~AA~~IQ~~~R~~~~Rkr~~~~~~~~---~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~---aA~~IQ~~~Rg~~~Rk~ 716 (848)
-...|+..+|++++.|+-+.-|.--+... .......+.+...-|.+----..+..+. ....||..+.--+....
T Consensus 191 ~q~~a~~tl~Sy~~~WL~~~L~~IF~~~~~~~~khlM~kL~~f~s~~~FS~ptmlk~y~~~~s~~~ii~~~~kEAL~k~~ 270 (1023)
T KOG0165|consen 191 QQKRAAITLQSYFRTWLTRKLFLIFRKAAVVLQKHLMHKLRAFLSAKHFSQPTMLKVYLQIRSSVIIIQARSKEALQKRK 270 (1023)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhccchhcCcHHHHHHHHHHHHHHHhcCchHHHHHHHhccCceeeccchHHHHHHHH
Confidence 34678999999999999887664322111 1222233333322222111111111111 23334554444444444
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHH
Q 003097 717 FLNMRRQAIKIQAAFRGFQVRKQY 740 (848)
Q Consensus 717 f~~~r~aai~IQa~~Rg~~~Rk~y 740 (848)
......-.++||+.|+.+..-..|
T Consensus 271 L~~i~~L~~~I~~A~~~~~~~~~~ 294 (1023)
T KOG0165|consen 271 LQEIKNLTIKIQAAWRRYRAKKYL 294 (1023)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhh
Confidence 455555666777777666555544
No 178
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=27.76 E-value=69 Score=37.54 Aligned_cols=69 Identities=16% Similarity=0.252 Sum_probs=47.7
Q ss_pred CCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCC---------ce--eEEEEEeCCCCCcccc
Q 003097 310 EKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP---------GL--FLLYMSLDGHKPISQV 378 (848)
Q Consensus 310 gg~kVlv~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~---------G~--Vpl~v~~~~~~~~Sev 378 (848)
.-+-+.+.|.+|.+ ++.+-||++++++.+=..-+|.|.+|+-.+ |+ ||+......+..-+--
T Consensus 506 d~amlel~g~nf~p-------~l~vwfg~~e~et~~r~~~sl~c~Vp~vs~f~~~w~~~~~P~~~~islvr~dg~vy~~~ 578 (622)
T KOG3743|consen 506 DVAMLELHGQNFVP-------NLQVWFGDVEAETYYRSGESLQCVVPDVSAFRQEWLWTRGPTFVPISLVRTDGTVYASG 578 (622)
T ss_pred ceeEEEecCCCCCC-------CceeeccccCchhhhcccceEEEEeCChhhcccchhcccCceeeeeeheeccceEEecc
Confidence 33567788999866 799999999999998777799999998732 22 5555444444333334
Q ss_pred cccccCC
Q 003097 379 LNFEYRS 385 (848)
Q Consensus 379 ~~Fey~~ 385 (848)
..|.|..
T Consensus 579 ~~fty~p 585 (622)
T KOG3743|consen 579 LTFTYTP 585 (622)
T ss_pred ceEEecc
Confidence 5566644
No 179
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=25.39 E-value=52 Score=34.46 Aligned_cols=48 Identities=23% Similarity=0.199 Sum_probs=36.6
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003097 553 LLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 553 LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~~Ll~~Ga~~~~~~~~l 606 (848)
|++.||--|. .|....||=++|...|+..+-+.|++.|+...+--..+
T Consensus 1 lle~ga~wn~------id~~n~t~gd~a~ern~~rly~~lv~~gv~Selll~~l 48 (271)
T KOG1709|consen 1 LLEYGAGWNF------IDYENKTVGDLALERNQSRLYRRLVEAGVPSELLLFAL 48 (271)
T ss_pred CcccCCCccc------cChhhCCchHHHHHccHHHHHHHHHHcCCchhhhhhcc
Confidence 4567777777 67888899999999999888888988887765443333
No 180
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=25.32 E-value=96 Score=31.70 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=28.0
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHH
Q 003097 505 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLL 554 (848)
Q Consensus 505 LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL 554 (848)
|.+|+..|....+.-.+++|-+++. ++|..|+.++|.+++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 4556666666666666666665543 6666666666666666654
No 181
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility]
Probab=24.27 E-value=50 Score=42.40 Aligned_cols=82 Identities=18% Similarity=0.090 Sum_probs=62.2
Q ss_pred HHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q 003097 648 AARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK-------KMAAAARIQHRFRSWKVRKEFLNM 720 (848)
Q Consensus 648 A~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~-------~~~aA~~IQ~~~Rg~~~Rk~f~~~ 720 (848)
+...|++++....++.+.++. .+...+| |++++.++ ...++.-+|..|+.+..+..+...
T Consensus 922 ~~~k~~~~~~~~~~~~~~~~~-----------~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1062)
T KOG4229|consen 922 SFFKQKWFRLTLERKGLLRLS-----------EGSVLIQ--RLELLGRRTCPVAGAPAVAAASLQNAWPVYRELSGRLGL 988 (1062)
T ss_pred HHHHHHHHHhhhccccchhhc-----------chhHHHH--HHHHhcccCCcchhhhhhhhhhccccchhhhhhhhhHHH
Confidence 566788888877777776666 6677777 66666655 234778888888888888888888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHH
Q 003097 721 RRQAIKIQAAFRGFQVRKQYGK 742 (848)
Q Consensus 721 r~aai~IQa~~Rg~~~Rk~y~~ 742 (848)
+.+++.+|..+++...++.+-.
T Consensus 989 ~~s~~~~~~~~~~~~~~~~~~~ 1010 (1062)
T KOG4229|consen 989 RRSFIADQSPRSRPAYTMIFAA 1010 (1062)
T ss_pred hhhhcchhcccccchhhhhHHH
Confidence 8888888888888877766543
No 182
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=22.64 E-value=84 Score=32.73 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=35.7
Q ss_pred CCcceEEEcCCeeccee---eeeCCeeeeecCCCCCceeEEEEEeCCC
Q 003097 328 SKSNMFCVCGEVRVPAE---FVQAGVYRCFLPPHSPGLFLLYMSLDGH 372 (848)
Q Consensus 328 ~~~~~~c~FG~~~vpa~---~~~~gvl~C~~Pph~~G~Vpl~v~~~~~ 372 (848)
.-.++++.||++.+--. .+.+|-|||.+-|+-+|...+.=...+.
T Consensus 7 ~~~~vsVsF~GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGK 54 (249)
T COG4674 7 YLDGVSVSFGGFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGK 54 (249)
T ss_pred EEeceEEEEcceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeeccc
Confidence 34578999999876655 3889999999999999998876555443
Done!