Query 003098
Match_columns 848
No_of_seqs 758 out of 3656
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 16:59:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003098.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003098hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 3E-114 6E-119 1007.0 41.1 807 1-836 74-947 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 8.1E-43 1.7E-47 315.2 6.1 73 1-73 46-118 (118)
3 KOG4412 26S proteasome regulat 99.9 5E-21 1.1E-25 185.1 14.3 133 465-604 70-203 (226)
4 KOG4412 26S proteasome regulat 99.8 2E-20 4.3E-25 181.0 8.2 132 466-605 37-171 (226)
5 PHA02743 Viral ankyrin protein 99.7 1.5E-17 3.2E-22 166.5 13.7 134 466-605 19-160 (166)
6 PHA02791 ankyrin-like protein; 99.7 2.6E-17 5.6E-22 178.1 16.4 130 466-604 60-191 (284)
7 KOG0509 Ankyrin repeat and DHH 99.7 1.4E-17 3.1E-22 188.4 13.9 131 465-603 76-208 (600)
8 PHA02791 ankyrin-like protein; 99.7 6E-17 1.3E-21 175.3 16.4 131 464-604 91-225 (284)
9 KOG0509 Ankyrin repeat and DHH 99.7 2.4E-17 5.1E-22 186.6 11.8 135 467-608 44-180 (600)
10 PHA02859 ankyrin repeat protei 99.7 1.5E-16 3.3E-21 165.2 16.5 133 465-604 49-190 (209)
11 PLN03192 Voltage-dependent pot 99.7 4.1E-16 8.9E-21 192.8 22.6 130 467-604 525-686 (823)
12 PHA02741 hypothetical protein; 99.7 1.2E-16 2.6E-21 160.4 14.3 127 465-599 19-158 (169)
13 PHA02875 ankyrin repeat protei 99.7 1.9E-16 4.2E-21 180.9 16.5 129 466-602 101-231 (413)
14 PHA02736 Viral ankyrin protein 99.7 6.2E-17 1.3E-21 159.7 10.6 129 466-600 16-153 (154)
15 PHA02875 ankyrin repeat protei 99.7 2E-16 4.4E-21 180.8 15.2 133 465-605 66-200 (413)
16 PHA02874 ankyrin repeat protei 99.7 4.7E-16 1E-20 179.1 17.7 139 464-604 121-286 (434)
17 PHA02878 ankyrin repeat protei 99.7 4.4E-16 9.5E-21 181.5 16.3 129 467-605 168-299 (477)
18 PHA02878 ankyrin repeat protei 99.7 8.3E-16 1.8E-20 179.2 17.2 114 484-603 149-265 (477)
19 PHA02798 ankyrin-like protein; 99.7 7.5E-16 1.6E-20 180.1 15.8 155 451-606 89-291 (489)
20 PHA02795 ankyrin-like protein; 99.7 1.1E-15 2.4E-20 172.1 16.3 183 408-601 90-290 (437)
21 PHA03100 ankyrin repeat protei 99.7 1.5E-15 3.3E-20 176.7 18.1 149 448-604 118-281 (480)
22 PHA02874 ankyrin repeat protei 99.7 2.1E-15 4.5E-20 173.7 18.9 107 491-603 114-220 (434)
23 KOG0508 Ankyrin repeat protein 99.6 4.4E-16 9.5E-21 169.5 10.8 138 448-594 94-236 (615)
24 PHA02859 ankyrin repeat protei 99.6 1.6E-15 3.5E-20 157.6 14.3 129 467-605 21-157 (209)
25 PHA03095 ankyrin-like protein; 99.6 1.7E-15 3.7E-20 175.8 16.1 131 465-601 185-318 (471)
26 PHA02989 ankyrin repeat protei 99.6 3E-15 6.6E-20 175.2 17.7 192 408-605 50-288 (494)
27 PHA02716 CPXV016; CPX019; EVM0 99.6 2E-15 4.4E-20 180.5 16.1 134 465-604 210-397 (764)
28 PHA02884 ankyrin repeat protei 99.6 2.5E-15 5.4E-20 163.0 15.2 121 466-593 31-157 (300)
29 PHA03100 ankyrin repeat protei 99.6 2.8E-15 6E-20 174.5 15.5 148 448-603 45-206 (480)
30 PHA02716 CPXV016; CPX019; EVM0 99.6 2.5E-15 5.5E-20 179.7 15.2 151 448-604 152-350 (764)
31 PHA02946 ankyin-like protein; 99.6 4.8E-15 1.1E-19 170.9 17.1 131 465-604 70-206 (446)
32 KOG0508 Ankyrin repeat protein 99.6 1E-15 2.2E-20 166.7 9.0 129 467-603 84-213 (615)
33 PHA03095 ankyrin-like protein; 99.6 6.5E-15 1.4E-19 171.0 16.1 127 467-600 47-181 (471)
34 PHA02946 ankyin-like protein; 99.6 7.4E-15 1.6E-19 169.4 15.9 146 450-604 84-240 (446)
35 KOG4177 Ankyrin [Cell wall/mem 99.6 3.2E-15 7E-20 181.9 13.4 244 331-599 379-632 (1143)
36 PHA02989 ankyrin repeat protei 99.6 1.1E-14 2.3E-19 170.6 17.4 126 466-598 144-314 (494)
37 PHA02876 ankyrin repeat protei 99.6 8.8E-15 1.9E-19 178.0 16.8 137 464-606 338-476 (682)
38 KOG0512 Fetal globin-inducing 99.6 3.9E-15 8.5E-20 143.4 10.4 127 470-603 66-195 (228)
39 KOG0502 Integral membrane anky 99.6 1.3E-15 2.8E-20 151.7 7.3 107 491-603 150-256 (296)
40 PF12796 Ank_2: Ankyrin repeat 99.6 5.3E-15 1.1E-19 131.8 10.6 89 505-603 1-89 (89)
41 PHA02798 ankyrin-like protein; 99.6 7.8E-15 1.7E-19 171.6 13.8 150 449-604 49-217 (489)
42 KOG0510 Ankyrin repeat protein 99.6 1.3E-14 2.8E-19 167.2 14.1 135 465-604 271-408 (929)
43 KOG0502 Integral membrane anky 99.6 3.7E-15 8E-20 148.5 8.4 131 465-604 158-289 (296)
44 PHA02876 ankyrin repeat protei 99.6 5E-14 1.1E-18 171.4 17.1 128 467-601 273-403 (682)
45 PHA02741 hypothetical protein; 99.5 2.5E-14 5.4E-19 143.6 10.9 105 494-604 14-130 (169)
46 KOG0195 Integrin-linked kinase 99.5 1.9E-14 4.2E-19 148.1 8.0 130 462-599 29-159 (448)
47 cd01175 IPT_COE IPT domain of 99.5 4.4E-14 9.5E-19 119.9 8.5 80 297-383 2-83 (85)
48 KOG0195 Integrin-linked kinase 99.5 3.1E-14 6.8E-19 146.6 9.1 110 491-606 24-133 (448)
49 KOG0514 Ankyrin repeat protein 99.5 7.6E-14 1.6E-18 148.2 12.2 139 451-595 281-429 (452)
50 PHA02795 ankyrin-like protein; 99.5 8.5E-14 1.8E-18 157.0 13.4 131 465-605 114-253 (437)
51 PHA02917 ankyrin-like protein; 99.5 1.1E-13 2.3E-18 166.2 15.2 151 449-604 46-227 (661)
52 KOG4177 Ankyrin [Cell wall/mem 99.5 6.7E-14 1.5E-18 170.6 11.5 141 461-609 468-609 (1143)
53 PHA02917 ankyrin-like protein; 99.5 1.5E-13 3.2E-18 165.1 13.8 123 470-600 105-257 (661)
54 KOG0510 Ankyrin repeat protein 99.5 1.3E-13 2.9E-18 158.9 12.2 131 464-600 222-368 (929)
55 KOG0514 Ankyrin repeat protein 99.5 1.9E-13 4.1E-18 145.3 12.2 131 465-604 266-405 (452)
56 PHA02730 ankyrin-like protein; 99.5 2.9E-13 6.3E-18 159.4 14.9 128 465-599 376-524 (672)
57 PHA02743 Viral ankyrin protein 99.5 9.8E-14 2.1E-18 138.9 9.3 107 491-603 10-125 (166)
58 PF12796 Ank_2: Ankyrin repeat 99.5 2.4E-13 5.3E-18 121.0 10.6 86 471-562 1-87 (89)
59 PHA02884 ankyrin repeat protei 99.5 3.3E-13 7.1E-18 146.6 12.0 105 495-605 26-136 (300)
60 KOG0505 Myosin phosphatase, re 99.4 2.9E-13 6.2E-18 150.8 10.7 137 463-607 69-265 (527)
61 PHA02792 ankyrin-like protein; 99.4 7.1E-13 1.5E-17 154.7 13.2 142 450-599 320-479 (631)
62 PHA02730 ankyrin-like protein; 99.4 5.9E-13 1.3E-17 156.9 12.2 114 484-604 361-493 (672)
63 KOG0505 Myosin phosphatase, re 99.4 3.3E-13 7.3E-18 150.3 9.5 137 470-607 43-232 (527)
64 KOG0520 Uncharacterized conser 99.4 3.2E-12 6.9E-17 152.2 16.3 308 492-833 565-921 (975)
65 KOG0515 p53-interacting protei 99.4 5.5E-13 1.2E-17 146.7 8.6 118 471-595 554-674 (752)
66 cd00204 ANK ankyrin repeats; 99.4 6.8E-12 1.5E-16 116.4 14.3 121 465-593 5-126 (126)
67 KOG4214 Myotrophin and similar 99.4 1.3E-12 2.8E-17 113.9 8.4 103 471-581 6-108 (117)
68 COG0666 Arp FOG: Ankyrin repea 99.4 4.3E-12 9.4E-17 130.0 12.7 124 466-596 72-203 (235)
69 PLN03192 Voltage-dependent pot 99.3 5.7E-12 1.2E-16 156.2 14.7 115 461-583 552-699 (823)
70 KOG1710 MYND Zn-finger and ank 99.3 3.9E-12 8.4E-17 131.4 10.7 127 464-598 9-137 (396)
71 KOG0507 CASK-interacting adapt 99.3 3.2E-12 6.9E-17 146.8 9.5 127 466-600 48-175 (854)
72 KOG0512 Fetal globin-inducing 99.3 4.3E-12 9.4E-17 122.6 8.3 95 503-603 65-160 (228)
73 TIGR00870 trp transient-recept 99.3 8.2E-12 1.8E-16 153.5 10.6 132 465-598 126-282 (743)
74 PHA02792 ankyrin-like protein; 99.3 2E-11 4.3E-16 142.7 12.9 128 461-595 65-239 (631)
75 cd00204 ANK ankyrin repeats; 99.3 3.7E-11 8E-16 111.4 12.1 99 497-601 3-101 (126)
76 KOG4214 Myotrophin and similar 99.3 1E-11 2.2E-16 108.3 7.6 94 503-603 4-97 (117)
77 PHA02736 Viral ankyrin protein 99.3 1.1E-11 2.3E-16 122.3 8.8 97 465-562 53-154 (154)
78 PF13857 Ank_5: Ankyrin repeat 99.3 4.1E-12 8.8E-17 103.6 4.8 55 520-580 1-56 (56)
79 TIGR00870 trp transient-recept 99.3 2.7E-11 5.8E-16 149.0 13.2 134 465-603 50-205 (743)
80 PF13637 Ank_4: Ankyrin repeat 99.2 2E-11 4.3E-16 98.6 6.5 54 501-554 1-54 (54)
81 PTZ00322 6-phosphofructo-2-kin 99.2 4.6E-11 9.9E-16 144.3 11.7 86 504-595 85-170 (664)
82 KOG3676 Ca2+-permeable cation 99.2 1.3E-10 2.8E-15 135.5 11.7 122 467-596 184-331 (782)
83 PTZ00322 6-phosphofructo-2-kin 99.2 1.1E-10 2.4E-15 141.1 11.6 104 470-581 85-196 (664)
84 PF13857 Ank_5: Ankyrin repeat 99.2 3.3E-11 7.1E-16 98.2 4.6 51 491-541 5-56 (56)
85 KOG0507 CASK-interacting adapt 99.1 2.6E-11 5.7E-16 139.4 5.2 109 493-607 41-149 (854)
86 PF13637 Ank_4: Ankyrin repeat 99.1 8.2E-11 1.8E-15 95.0 6.6 54 534-593 1-54 (54)
87 COG0666 Arp FOG: Ankyrin repea 99.1 1.3E-09 2.9E-14 111.5 13.6 106 492-603 64-177 (235)
88 KOG0515 p53-interacting protei 99.1 2.9E-10 6.4E-15 125.6 8.2 91 505-601 554-644 (752)
89 KOG3676 Ca2+-permeable cation 99.0 6.4E-10 1.4E-14 129.8 10.0 131 466-603 142-305 (782)
90 PF01833 TIG: IPT/TIG domain; 99.0 1E-09 2.3E-14 96.5 7.9 84 296-383 1-85 (85)
91 KOG4369 RTK signaling protein 99.0 9.3E-10 2E-14 129.6 8.9 253 329-606 760-1027(2131)
92 cd01179 IPT_plexin_repeat2 Sec 98.9 5.8E-09 1.3E-13 92.6 9.7 83 296-384 1-84 (85)
93 cd00102 IPT Immunoglobulin-lik 98.8 1.5E-08 3.3E-13 90.1 9.3 84 296-384 1-88 (89)
94 KOG4369 RTK signaling protein 98.8 2E-09 4.3E-14 126.9 4.1 130 465-602 755-886 (2131)
95 KOG0818 GTPase-activating prot 98.8 1.9E-08 4E-13 110.9 11.1 97 494-596 120-223 (669)
96 KOG1710 MYND Zn-finger and ank 98.8 2E-08 4.4E-13 104.3 8.7 98 502-604 13-110 (396)
97 KOG0783 Uncharacterized conser 98.7 1.3E-08 2.7E-13 117.8 3.8 83 494-582 45-128 (1267)
98 KOG0782 Predicted diacylglycer 98.6 1E-07 2.2E-12 106.3 9.5 121 469-596 868-990 (1004)
99 KOG0506 Glutaminase (contains 98.6 5.9E-08 1.3E-12 106.7 5.6 93 498-596 503-596 (622)
100 cd00603 IPT_PCSR IPT domain of 98.5 6.1E-07 1.3E-11 80.3 9.4 85 296-384 1-89 (90)
101 PF13606 Ank_3: Ankyrin repeat 98.5 1.8E-07 3.9E-12 66.1 4.1 30 533-562 1-30 (30)
102 KOG0705 GTPase-activating prot 98.5 1.2E-06 2.6E-11 98.6 12.6 96 466-562 623-722 (749)
103 cd01180 IPT_plexin_repeat1 Fir 98.4 8.9E-07 1.9E-11 80.1 8.9 87 296-384 1-93 (94)
104 smart00429 IPT ig-like, plexin 98.4 8.6E-07 1.9E-11 79.3 8.0 83 296-383 2-89 (90)
105 KOG0160 Myosin class V heavy c 98.3 2.8E-06 6.1E-11 102.3 11.9 85 644-739 672-759 (862)
106 PF00023 Ank: Ankyrin repeat H 98.3 1E-06 2.2E-11 63.6 4.5 30 533-562 1-30 (33)
107 KOG0818 GTPase-activating prot 98.2 3.5E-06 7.6E-11 93.4 9.1 85 470-555 136-221 (669)
108 KOG0522 Ankyrin repeat protein 98.2 2.6E-06 5.6E-11 95.8 8.2 87 470-556 23-110 (560)
109 COG5022 Myosin heavy chain [Cy 98.2 5.5E-05 1.2E-09 94.1 19.5 153 636-832 734-894 (1463)
110 KOG0522 Ankyrin repeat protein 98.2 3.2E-06 7E-11 95.0 8.0 87 503-595 22-110 (560)
111 cd01181 IPT_plexin_repeat3 Thi 98.2 4.6E-06 1E-10 76.2 7.7 72 296-370 1-80 (99)
112 KOG0160 Myosin class V heavy c 98.2 1.5E-05 3.3E-10 96.1 13.7 77 680-757 674-754 (862)
113 KOG0506 Glutaminase (contains 98.2 1.8E-06 4E-11 95.2 5.4 94 466-560 505-599 (622)
114 KOG0705 GTPase-activating prot 98.1 4.2E-06 9.2E-11 94.3 7.8 91 505-601 628-722 (749)
115 PF00023 Ank: Ankyrin repeat H 98.1 2.7E-06 5.8E-11 61.4 4.2 33 500-532 1-33 (33)
116 PF13606 Ank_3: Ankyrin repeat 98.1 2.5E-06 5.4E-11 60.3 3.9 30 500-529 1-30 (30)
117 cd02849 CGTase_C_term Cgtase ( 98.1 1.5E-05 3.2E-10 70.0 9.0 79 296-383 3-81 (81)
118 KOG0521 Putative GTPase activa 98.0 5.6E-06 1.2E-10 100.5 6.4 99 491-595 644-744 (785)
119 KOG2384 Major histocompatibili 98.0 1.2E-05 2.7E-10 79.6 7.0 66 524-595 2-68 (223)
120 KOG3609 Receptor-activated Ca2 97.9 3.6E-05 7.8E-10 91.3 9.2 129 465-602 23-160 (822)
121 KOG0783 Uncharacterized conser 97.9 5.7E-06 1.2E-10 96.5 2.0 74 527-606 45-119 (1267)
122 cd00604 IPT_CGTD IPT domain (d 97.7 0.00017 3.7E-09 63.4 8.4 80 296-384 1-80 (81)
123 KOG0511 Ankyrin repeat protein 97.6 0.00017 3.7E-09 78.2 8.7 61 502-562 37-97 (516)
124 KOG0164 Myosin class I heavy c 97.6 0.00062 1.3E-08 79.0 13.3 63 699-769 697-759 (1001)
125 KOG2384 Major histocompatibili 97.6 0.00013 2.9E-09 72.5 6.5 70 491-560 2-72 (223)
126 KOG0164 Myosin class I heavy c 97.5 0.00064 1.4E-08 78.9 11.8 79 644-737 695-783 (1001)
127 KOG0511 Ankyrin repeat protein 97.2 0.00048 1E-08 74.8 5.8 59 535-599 37-95 (516)
128 PF00612 IQ: IQ calmodulin-bin 97.0 0.001 2.2E-08 42.9 3.5 20 722-741 2-21 (21)
129 COG5022 Myosin heavy chain [Cy 97.0 0.023 4.9E-07 71.8 17.9 118 677-827 743-866 (1463)
130 KOG0782 Predicted diacylglycer 96.7 0.0018 3.8E-08 73.3 5.3 76 520-599 885-960 (1004)
131 KOG0521 Putative GTPase activa 96.6 0.002 4.3E-08 78.8 4.7 89 466-556 655-744 (785)
132 PF00612 IQ: IQ calmodulin-bin 96.5 0.0033 7.1E-08 40.5 3.4 19 646-664 2-20 (21)
133 KOG2505 Ankyrin repeat protein 96.5 0.019 4.2E-07 64.8 11.2 71 514-593 404-480 (591)
134 KOG3836 HLH transcription fact 96.3 0.0014 3E-08 75.8 1.4 209 297-562 244-457 (605)
135 smart00248 ANK ankyrin repeats 96.1 0.0088 1.9E-07 39.4 4.1 28 534-561 2-29 (30)
136 cd00602 IPT_TF IPT domain of e 96.0 0.025 5.4E-07 51.8 7.7 82 297-384 2-100 (101)
137 cd01178 IPT_NFAT IPT domain of 96.0 0.02 4.3E-07 52.1 6.8 82 295-384 1-100 (101)
138 PTZ00014 myosin-A; Provisional 95.9 0.016 3.6E-07 71.5 7.8 35 723-757 779-813 (821)
139 cd01176 IPT_RBP-Jkappa IPT dom 95.8 0.032 6.9E-07 49.1 6.7 66 312-384 20-96 (97)
140 smart00015 IQ Short calmodulin 95.6 0.015 3.2E-07 39.6 3.2 21 721-741 3-23 (26)
141 KOG2128 Ras GTPase-activating 95.2 0.063 1.4E-06 67.6 9.0 92 650-745 540-646 (1401)
142 KOG3610 Plexins (functional se 95.1 0.051 1.1E-06 67.6 8.0 88 292-385 139-230 (1025)
143 KOG2128 Ras GTPase-activating 95.1 0.33 7.2E-06 61.4 14.8 146 649-827 481-646 (1401)
144 cd01177 IPT_NFkappaB IPT domai 94.9 0.096 2.1E-06 47.6 7.3 82 297-384 2-101 (102)
145 smart00248 ANK ankyrin repeats 94.9 0.041 9E-07 36.0 3.9 29 500-528 1-29 (30)
146 PTZ00014 myosin-A; Provisional 94.8 0.066 1.4E-06 66.3 8.1 41 699-739 778-818 (821)
147 smart00015 IQ Short calmodulin 94.8 0.032 6.9E-07 37.9 2.9 21 644-664 2-22 (26)
148 KOG2505 Ankyrin repeat protein 93.9 0.095 2.1E-06 59.5 6.0 46 497-542 426-471 (591)
149 KOG3609 Receptor-activated Ca2 93.6 0.13 2.7E-06 62.2 6.6 87 467-562 62-159 (822)
150 KOG0163 Myosin class VI heavy 89.6 28 0.00061 42.1 19.4 49 651-699 779-833 (1259)
151 PF06128 Shigella_OspC: Shigel 83.6 2.9 6.2E-05 43.5 6.5 95 501-599 179-280 (284)
152 PF08549 SWI-SNF_Ssr4: Fungal 74.4 4.2 9.1E-05 48.6 5.1 65 4-75 78-156 (669)
153 KOG0162 Myosin class I heavy c 71.5 11 0.00024 45.2 7.5 45 698-745 696-740 (1106)
154 KOG0942 E3 ubiquitin protein l 71.1 6.5 0.00014 48.3 5.6 32 798-829 24-55 (1001)
155 KOG4427 E3 ubiquitin protein l 69.1 15 0.00033 44.3 7.9 35 694-734 26-60 (1096)
156 KOG0165 Microtubule-associated 67.9 2.8E+02 0.006 34.3 17.7 140 678-825 147-297 (1023)
157 KOG3836 HLH transcription fact 67.2 7.6 0.00016 45.9 5.0 46 491-536 419-464 (605)
158 PF06128 Shigella_OspC: Shigel 67.0 10 0.00022 39.7 5.3 48 513-560 229-280 (284)
159 KOG0161 Myosin class II heavy 67.0 66 0.0014 43.9 13.9 38 720-757 772-812 (1930)
160 KOG0161 Myosin class II heavy 66.2 5.1E+02 0.011 35.9 21.9 45 643-695 771-815 (1930)
161 KOG0942 E3 ubiquitin protein l 63.9 13 0.00029 45.8 6.3 29 694-722 25-53 (1001)
162 KOG3610 Plexins (functional se 63.2 8.3 0.00018 48.8 4.6 76 293-369 47-126 (1025)
163 KOG4427 E3 ubiquitin protein l 62.1 20 0.00044 43.3 7.2 35 676-712 27-61 (1096)
164 KOG0163 Myosin class VI heavy 61.8 3.9E+02 0.0084 33.0 22.4 24 643-666 811-834 (1259)
165 KOG0162 Myosin class I heavy c 54.2 25 0.00053 42.5 6.1 39 790-831 686-724 (1106)
166 PF03158 DUF249: Multigene fam 48.8 27 0.00059 35.5 4.7 46 537-594 146-191 (192)
167 PF09099 Qn_am_d_aIII: Quinohe 47.7 45 0.00097 29.4 5.3 64 296-368 2-70 (81)
168 KOG0377 Protein serine/threoni 47.3 21 0.00046 40.6 4.0 23 642-664 14-36 (631)
169 KOG0377 Protein serine/threoni 46.1 26 0.00057 39.9 4.5 20 698-717 17-36 (631)
170 PF11929 DUF3447: Domain of un 45.9 29 0.00063 29.8 4.0 47 503-556 8-54 (76)
171 PF14545 DBB: Dof, BCAP, and B 41.5 73 0.0016 31.2 6.2 67 301-373 3-78 (142)
172 PF11929 DUF3447: Domain of un 39.8 45 0.00098 28.6 4.2 46 537-595 9-54 (76)
173 KOG0165 Microtubule-associated 37.4 6E+02 0.013 31.6 13.9 102 641-742 189-296 (1023)
174 PF03106 WRKY: WRKY DNA -bindi 33.1 16 0.00036 30.2 0.3 9 7-15 2-10 (60)
175 PF03158 DUF249: Multigene fam 31.3 65 0.0014 32.9 4.2 44 505-554 147-190 (192)
176 smart00774 WRKY DNA binding do 30.3 20 0.00043 29.6 0.4 9 7-15 2-10 (59)
177 KOG1709 Guanidinoacetate methy 29.7 40 0.00086 35.3 2.5 49 553-607 1-49 (271)
178 KOG3743 Recombination signal b 29.5 61 0.0013 37.9 4.2 69 310-385 506-585 (622)
179 TIGR03437 Soli_cterm Solibacte 28.7 2.1E+02 0.0045 30.1 7.7 64 309-372 3-75 (215)
180 PF08763 Ca_chan_IQ: Voltage g 27.9 75 0.0016 23.4 2.9 17 700-716 11-27 (35)
181 KOG4229 Myosin VII, myosin IXB 25.4 46 0.001 42.7 2.6 82 648-742 922-1010(1062)
182 COG4674 Uncharacterized ABC-ty 22.5 85 0.0018 32.7 3.3 45 328-372 7-54 (249)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=2.8e-114 Score=1007.03 Aligned_cols=807 Identities=42% Similarity=0.638 Sum_probs=601.9
Q ss_pred CcccccccCccccccCCCcchHHhhhhhccCCeeeEEEeeeccCCCCCcceeeeeeccCCCCceEEEEeeecCCCCCCC-
Q 003098 1 MLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPAT- 79 (848)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (848)
||||||||||+|||||||||||||||||||||+|+||||||||+++|||||||||||+++++||||||||||++..-+.
T Consensus 74 ~lr~fRKDGh~WkKkkDGKtirEaHe~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~ 153 (975)
T KOG0520|consen 74 VLRYFRKDGHNWKKKKDGKTIREAHEKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAK 153 (975)
T ss_pred HHHHHhhcchhhhhcCCCCcChHHHHhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeeccccccccc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999944332
Q ss_pred -CCCCCCCCCCCCCccccccccccCCCCCcc---c-----------cCcccccCCCCCccccccccccccccccc-cccc
Q 003098 80 -PPNSHSSSISDQSAPLLLSEEFNSGAGHAY---S-----------AGGKELQAPNESLTVQNHEMRLHELNTLE-WDDL 143 (848)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 143 (848)
+.....+.++|.- ++..+.+.+..++.. + +....++.-.+ ...+|..+++..+..+ |..+
T Consensus 154 ~~~~~~~s~~sd~~--~S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~~~~~~g~~~~--~s~~h~i~~~~~~s~~~~~~~ 229 (975)
T KOG0520|consen 154 GAGEIFSSIISDKA--WSLNQLAGQLSPIFHNHSSVNEDVAEINSNQTGNALGSVFG--NSRNHRIRLHEVNSLDPLYKL 229 (975)
T ss_pred Cccccccccccccc--ccHHHhhcccCcchhcccchHHHHHHHhhhccccccccccC--cchhhhhcccccCCccccccc
Confidence 1112223444443 333333322222111 0 11111111001 2358999999999999 9999
Q ss_pred cccCCCCCCCCCCCCCC--------------ccccccccccccCCCCCCCCCCCCCC-ccccccCCCCCCCCCC-ccCCC
Q 003098 144 VVTNDSNDSTEPRGDKF--------------SHFDQQNHTAIKGAASNGSFFPSHDS-YAEVSSGGCLTSLSQP-IDRSN 207 (848)
Q Consensus 144 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 207 (848)
.++.++.+...|.-... .++.....+..+++..- ..+..+ +..|.+ +..+..+ +..++
T Consensus 230 p~s~~s~~~~~~~~~~~~~~~~~~~~rs~~~s~~te~l~n~~~~~~~~---g~s~s~~l~~i~~---~~~~~~~~~~~p~ 303 (975)
T KOG0520|consen 230 PVSDDSLNLSAPKPIDLPKGPTSVKQRSSSPSYFTEILGNAPSGLVSQ---GNSLSSSLQRISS---FTGLDNAAYEQPN 303 (975)
T ss_pred cccCCccccccCCCcccccCCcchhhcCCCCcchhhhcccCCCccccc---ccccccchhhccc---ccccccccccCCc
Confidence 99988644443322111 11111111111110000 000000 000100 0000000 00000
Q ss_pred CccccCCccchhhccCCccc---ccccccccccccCCCc----cc-chhcCCCCCCCchhhhhHHhhcCCCC--------
Q 003098 208 NTQFNNLDGVYSELMGTQSS---VSSQRNEFGEVCTGDS----LD-ILAGDGLQSQDSFGKWMNYIMTDSPG-------- 271 (848)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~sf~~~~~~~~~~s~~-------- 271 (848)
...|. ...+..-+..+. ...+...........+ .+ .+.++||++.|||++|++-+...+++
T Consensus 304 ~~nf~---~~ss~~s~~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~~~~~l~sgdsf~~~~~t~~e~~d~~q~~s~~~ 380 (975)
T KOG0520|consen 304 SQNFE---PNSSLNSHVTGQSYGQGLQARSPSATSESRPITSAADAALSELGLKSGDSFSRWASTFGEISDLGQDPSGEA 380 (975)
T ss_pred ccccc---ccccCCCCccccccCccccCCCcccccccCCcchhhccccccccccccccccchhhhhcccccCCCCCcccc
Confidence 01110 000000000000 0011111111111111 22 46689999999999999986543322
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCC
Q 003098 272 SVDDPVLEPSISS--GHHQFTVPEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAG 349 (848)
Q Consensus 272 ~~~~~~~~~~~~~--~~~~s~~~~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~g 349 (848)
.|.. ...+.+.. ..++| .++|+|+|+||||+|+|++||+||+|+|++. +....+|+||||+++|||++|++|
T Consensus 381 ~~~p-~~~~~~~~~s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~~----~~~~~~ysc~Fg~~~VPAeliq~G 454 (975)
T KOG0520|consen 381 VWTP-ENDPMGPPGSFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFPQ----DETRSNYSCMFGEQRVPAELIQEG 454 (975)
T ss_pred cccc-CCCcCCCcccccCCC-CCcceeeeeccCcccccCCCCcEEEEecCcc----ccCCCceEEEeCCccccHHHhhcc
Confidence 1211 11111111 34445 4499999999999999999999999999743 235889999999999999999999
Q ss_pred eeeeecCCCCCceeEEEEEeC-CCCCcccccccccCCCC--CccCCCCccccchhhHHHHHHHHHHHHhccccccccccC
Q 003098 350 VYRCFLPPHSPGLFLLYMSLD-GHKPISQVLNFEYRSPQ--LHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSS 426 (848)
Q Consensus 350 vl~C~~Pph~~G~Vpl~v~~~-~~~~~Sev~~Fey~~~~--~~~~~~~~~~~~~~~~~~l~~Rl~~LL~~~~~~l~il~s 426 (848)
|||||||||+||.|+|||+|+ ++..|||+++|+|...+ .+++.+ -++...++.++.||..++... .+++++
T Consensus 455 VLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s---~~d~~~~~sl~~rl~~~~~r~---~~~~~s 528 (975)
T KOG0520|consen 455 VLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLS---WEDFLFQMSLLHRLETMLNRK---QSILSS 528 (975)
T ss_pred eeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccc---cccchhhhHHHHHHHHHHHHh---HhHhhc
Confidence 999999999999999999998 88999999999999843 344433 124457778888888887643 245666
Q ss_pred CCCCCChHHHHH--HhhhhhcCCCCHHH-HHHHhCCCCCCcccccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCC
Q 003098 427 KVPPNSLKEAKK--FASKSTCISNSWAY-LFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHG 501 (848)
Q Consensus 427 k~~~~~l~e~~~--~~~~i~~~~~~~~~-li~~l~~~~~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~--Ga~in~~D~~G 501 (848)
+.++....++.. ++.+++...+.|.+ .+.....+.....+.++-++.-.++..+..||++++++ |...+..|.+|
T Consensus 529 ~~~~~n~~~~~~~~l~skv~~l~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~ 608 (975)
T KOG0520|consen 529 KPSTENTSDAESGNLASKVVHLLNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDG 608 (975)
T ss_pred cCCccccccccchhHHHHHHHHHHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccC
Confidence 777777777777 88999998999999 88888888888888888877777888889999999999 55666699999
Q ss_pred CchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003098 502 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 502 ~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
+..+|++|..|+.+.+.+.++.|..++++|.+||||||||+.+|++.++..|++.|++.+++|||+..+..|.|+.++|.
T Consensus 609 qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~ 688 (975)
T KOG0520|consen 609 QGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLAR 688 (975)
T ss_pred CChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHhhhhhhccccccccc-cccCcccccccccc-ccc--CccchhhhhhhhhhHHhhhHHHHHHHHHHHhh
Q 003098 582 KKGFDGLAAFLSEQALVAQFNDMTLAG-NISGSLQTGSTITV-DTQ--NLTEDEVYLKDTLSAYRTAAEAAARIQAAFRE 657 (848)
Q Consensus 582 ~~G~~~iv~lLle~Ga~~~l~~~~l~~-~is~~~~~~~~~~~-~~~--~~~~~~lsl~~sL~a~r~~~~Aai~IQ~~~R~ 657 (848)
.+||.++..+|.++.+..++.++.+++ ++++.......... .+. +..+++.+++|+|.++|++++||.+||++||+
T Consensus 689 s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~ 768 (975)
T KOG0520|consen 689 ANGHKGIAGYLSEKALSAHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRA 768 (975)
T ss_pred cccccchHHHHhhhHHHHHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhh
Confidence 999999999999999999999999988 55554433333322 222 22345567999999999999999999999999
Q ss_pred hHHHHHHHH-hhcCChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 003098 658 HSLKVQTKA-IRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQV 736 (848)
Q Consensus 658 ~~~Rkr~~~-~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~ 736 (848)
...++...+ +...............+.++..++++..|..-.+|..||.+||+|+.|+.|+..|+.+++||+++||++.
T Consensus 769 ~~~~~~~a~~i~~~~~~~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~ 848 (975)
T KOG0520|consen 769 QSFQKKQAREIMDATKEQISEELAVSMKASSAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQV 848 (975)
T ss_pred hhhhhhhHHHHHhhcchhhhhhhhhhhhcccchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhH
Confidence 999865544 3333445566777788899999987777777789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 737 RKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHE---GDAEEDFYRASRKQAEERVERSVVRVQSMF 813 (848)
Q Consensus 737 Rk~y~~~~~aa~~IQ~~~R~~r~~r~~~r~lr~~~~~~~~~~~q~qa---~~~~~~~~~~~R~q~~~~~~~A~irIQs~~ 813 (848)
|+.|+++.|++.++.+.+.+||++++.+|+++.++... .|..+ .++++++|+..|++.++++.+|+++||+|+
T Consensus 849 r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e----~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~ 924 (975)
T KOG0520|consen 849 RKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFE----EQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMF 924 (975)
T ss_pred hhhhheechhhhHHHHHHHHHHHhhhhhcccccccchh----ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999886431 11111 268999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 003098 814 RSKKAQEEYRRMKLAHDQAKLEY 836 (848)
Q Consensus 814 R~~~aRr~~~~lk~~~~qak~e~ 836 (848)
|.+++|.+|+|+....++.++.+
T Consensus 925 rs~~a~qqyrR~~~~~~~~~~~~ 947 (975)
T KOG0520|consen 925 RSPKAQQQYRRLLLVYEQYQESY 947 (975)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999988865
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=8.1e-43 Score=315.19 Aligned_cols=73 Identities=67% Similarity=1.203 Sum_probs=71.5
Q ss_pred CcccccccCccccccCCCcchHHhhhhhccCCeeeEEEeeeccCCCCCcceeeeeeccCCCCceEEEEeeecC
Q 003098 1 MLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETH 73 (848)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (848)
++||||||||+|||||||||||||||||||||+|+||||||||++|||||||||||||++|+||||||||||+
T Consensus 46 ~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 46 VVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEVLNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred HhhhhhcccceeEEcCCCCchhhhhhhhccCceeeeEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999985
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=5e-21 Score=185.13 Aligned_cols=133 Identities=23% Similarity=0.216 Sum_probs=122.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
+.+.+|||.+|..++.+ .+..++.. |+++|..+..|+|+|||||..|..+++.+|+++|+.|+.+|..|.||||-|+.
T Consensus 70 daGWtPlhia~s~g~~e-vVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAa 148 (226)
T KOG4412|consen 70 DAGWTPLHIAASNGNDE-VVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAA 148 (226)
T ss_pred ccCCchhhhhhhcCcHH-HHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHh
Confidence 45788999998888665 24444444 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
-|..+++++|+..||.+|. +|..|+||||.|...||.+++.+|+++||+..+.+.
T Consensus 149 vGklkvie~Li~~~a~~n~------qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edk 203 (226)
T KOG4412|consen 149 VGKLKVIEYLISQGAPLNT------QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDK 203 (226)
T ss_pred ccchhhHHHHHhcCCCCCc------ccccCccHHHHHHhccCchHHHHHHHhccceeeccc
Confidence 9999999999999999998 899999999999999999999999999999887776
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=2e-20 Score=181.01 Aligned_cols=132 Identities=19% Similarity=0.185 Sum_probs=122.5
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCCCchHHHHHHcCCHHHHHHHHHC-CCCCccccCCCCcHHHHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~--Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~-Ga~in~~D~~G~TpLh~Aa 542 (848)
+++++||.+|.-++.. ++.+|++ +..+|.+|..|+||||.||..|+.++|+.|+.+ |+++|..+..|.|+||||+
T Consensus 37 D~Rt~LHwa~S~g~~e--iv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAa 114 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVE--IVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAA 114 (226)
T ss_pred cCCceeeeeeecCchh--HHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhh
Confidence 6889999999998776 5666664 888999999999999999999999999999988 9999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
..|+.+|+.+|++.|+.+++ +|..|.||||-|+.-|..+++++|+..|+..+..+..
T Consensus 115 gK~r~eIaqlLle~ga~i~~------kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~ 171 (226)
T KOG4412|consen 115 GKGRLEIAQLLLEKGALIRI------KDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKY 171 (226)
T ss_pred cCChhhHHHHHHhcCCCCcc------cccccCchhHHHHhccchhhHHHHHhcCCCCCccccc
Confidence 99999999999999999999 9999999999999999999999999999888777653
No 5
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.74 E-value=1.5e-17 Score=166.54 Aligned_cols=134 Identities=22% Similarity=0.181 Sum_probs=116.8
Q ss_pred cccchHHHHHHcCCcHH--HHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHH---HHHHHHCCCCCcccc-CCCCcHH
Q 003098 466 EAKDSFFELTLKSKLKE--WLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWA---ILLFSWSGLSLDFRD-KYGWTAL 538 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e--~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~---v~~LL~~Ga~in~~D-~~G~TpL 538 (848)
...+.++.+|..+++.. .+++.|.. |.+++..|..|+||||+|+..|..+. +++|+..|+++|.+| ..|.|||
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL 98 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL 98 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence 46678999999888753 13334444 88999999999999999999988654 889999999999998 5899999
Q ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 539 HWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 539 h~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
|+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++.+-.+..
T Consensus 99 h~A~~~g~~~iv~~Ll~~~gad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 160 (166)
T PHA02743 99 HIAASTKNYELAEWLCRQLGVNLGA------INYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSI 160 (166)
T ss_pred HHHHHhCCHHHHHHHHhccCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccC
Confidence 99999999999999995 8999988 8899999999999999999999999999998666554
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.74 E-value=2.6e-17 Score=178.09 Aligned_cols=130 Identities=18% Similarity=0.196 Sum_probs=99.2
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCC-cHHHHHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGW-TALHWAAY 543 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~-TpLh~Aa~ 543 (848)
++.+||+.|+..++.. +++.|+. |++++..|..|.||||+|+..|+.+++++|+..|++++.++..|+ ||||+|+.
T Consensus 60 d~~TpLh~Aa~~g~~e--iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~ 137 (284)
T PHA02791 60 ENEFPLHQAATLEDTK--IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 137 (284)
T ss_pred CCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHH
Confidence 4567888887777655 4555554 888888888888888888888888888888888888888888775 78888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.|+.++|++|++.|++..- ...|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 138 ~g~~eivk~LL~~~~~~~d-------~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~ 191 (284)
T PHA02791 138 LNDVSIVSYFLSEIPSTFD-------LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNS 191 (284)
T ss_pred cCCHHHHHHHHhcCCcccc-------cccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence 8888888888887654311 12478888888888888888888888887766543
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.73 E-value=1.4e-17 Score=188.36 Aligned_cols=131 Identities=25% Similarity=0.317 Sum_probs=120.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCcccc-CCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D-~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
.++.+.||.||+++++. +.+.|++ |+++|..+ ..|.|||||||..|+..+|.+|+++||+++.+|..|.||||.|+
T Consensus 76 ~~g~tlLHWAAiNNrl~--v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~ 153 (600)
T KOG0509|consen 76 REGVTLLHWAAINNRLD--VARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAA 153 (600)
T ss_pred cCCccceeHHHHcCcHH--HHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHH
Confidence 46778899999999988 7777777 99999987 67999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
..|+.-+|.+||.+|++++. +|.+|+|||++|+.+|+...+.+|++-|+.....+
T Consensus 154 ~~~~~~~vayll~~~~d~d~------~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d 208 (600)
T KOG0509|consen 154 QFGHTALVAYLLSKGADIDL------RDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD 208 (600)
T ss_pred HhCchHHHHHHHHhcccCCC------cCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence 99999999999999999998 89999999999999999988999999998776655
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=99.72 E-value=6e-17 Score=175.28 Aligned_cols=131 Identities=13% Similarity=0.029 Sum_probs=116.0
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCC-chHHHHHHcCCHHHHHHHHHCCCCCcccc-CCCCcHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQ-GVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHW 540 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~-T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D-~~G~TpLh~ 540 (848)
...+.+||+.|+..++.. +++.|+. |++++..+..|. ||||+|+..|+.+++++|+..|.+. .| ..|.||||+
T Consensus 91 d~~G~TpLh~Aa~~g~~e--ivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~ 166 (284)
T PHA02791 91 DDKGNTALYYAVDSGNMQ--TVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHI 166 (284)
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHH
Confidence 346789999999998876 5666666 999999998884 8999999999999999999987654 23 258999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH-HHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 541 AAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA-ADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 541 Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~Tp-L~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+..|+.+++++|+++||+++. +|..|.|| ||+|+..|+.+++++|+++|++.+.++.
T Consensus 167 Aa~~g~~eiv~lLL~~gAd~n~------~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~ 225 (284)
T PHA02791 167 TIKNGHVDMMILLLDYMTSTNT------NNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL 225 (284)
T ss_pred HHHcCCHHHHHHHHHCCCCCCc------ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence 9999999999999999999998 78899987 9999999999999999999999988776
No 9
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.71 E-value=2.4e-17 Score=186.62 Aligned_cols=135 Identities=25% Similarity=0.314 Sum_probs=122.3
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcccc-CCCCcHHHHHHHc
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWAAYY 544 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D-~~G~TpLh~Aa~~ 544 (848)
..+.++.|+..|.++. +.+.+.. |.+++..|.+|.|+|||||.++..+++++|+++|++||..+ .-|-|||||||.+
T Consensus 44 ~~~~~v~A~q~G~l~~-v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~ 122 (600)
T KOG0509|consen 44 SLDDIVKATQYGELET-VKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN 122 (600)
T ss_pred hhhhhhhHhhcchHHH-HHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc
Confidence 3456777888888775 5555555 89999999999999999999999999999999999999998 6789999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 608 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~~ 608 (848)
|+..+|.+|+++|||+++ +|..|.||+|+|+..||.-++.+|+.+|++.+++|.+-..
T Consensus 123 G~~~vv~lLlqhGAdpt~------~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grT 180 (600)
T KOG0509|consen 123 GHISVVDLLLQHGADPTL------KDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRT 180 (600)
T ss_pred CcHHHHHHHHHcCCCCce------ecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCC
Confidence 999999999999999999 8999999999999999999999999999999998876543
No 10
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.5e-16 Score=165.23 Aligned_cols=133 Identities=16% Similarity=0.068 Sum_probs=113.3
Q ss_pred ccccchHHHHHHcCC-cHHHHHHHHHc-CCCCcccc-CCCCchHHHHHHc---CCHHHHHHHHHCCCCCccccCCCCcHH
Q 003098 465 PEAKDSFFELTLKSK-LKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWTAL 538 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~-l~e~Ll~~L~~-Ga~in~~D-~~G~T~LH~Aa~~---G~~~~v~~LL~~Ga~in~~D~~G~TpL 538 (848)
..+.+||+.++..+. ..+ +++.|++ |+++|..+ ..|.||||+|+.. ++.+++++|+++|+++|.+|..|.|||
T Consensus 49 ~~g~TpLh~a~~~~~~~~e-iv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpL 127 (209)
T PHA02859 49 DLYETPIFSCLEKDKVNVE-ILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLL 127 (209)
T ss_pred ccCCCHHHHHHHcCCCCHH-HHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 457788888877552 233 5566665 99999987 5899999998764 479999999999999999999999999
Q ss_pred HHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH-HHHcCChHHHHHHHhhhhhhccccc
Q 003098 539 HWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADI-ASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 539 h~Aa~--~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~l-A~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+|+. .++.+++++|++.|++++. +|..|.||||. |+..++.+++++|+++|++.+..+.
T Consensus 128 h~a~~~~~~~~~iv~~Li~~gadin~------~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~ 190 (209)
T PHA02859 128 HMYMCNFNVRINVIKLLIDSGVSFLN------KDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNK 190 (209)
T ss_pred HHHHHhccCCHHHHHHHHHcCCCccc------ccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Confidence 99976 4789999999999999998 88999999996 5668899999999999998876654
No 11
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.71 E-value=4.1e-16 Score=192.84 Aligned_cols=130 Identities=19% Similarity=0.239 Sum_probs=104.6
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
...+++.||..++.. +++.|++ |+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|
T Consensus 525 ~~~~L~~Aa~~g~~~--~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g 602 (823)
T PLN03192 525 MASNLLTVASTGNAA--LLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAK 602 (823)
T ss_pred chhHHHHHHHcCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhC
Confidence 456788888777654 4444444 8888888888888888888888888888888888888888888888888666555
Q ss_pred CHH-------------------------------HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHh
Q 003098 546 REK-------------------------------MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 594 (848)
Q Consensus 546 ~~e-------------------------------iv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle 594 (848)
+.+ +++.|+++|+++|. +|..|.||||+|+..|+.+++++|++
T Consensus 603 ~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~------~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 603 HHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDS------EDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred CHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 555 55556667777666 89999999999999999999999999
Q ss_pred hhhhhccccc
Q 003098 595 QALVAQFNDM 604 (848)
Q Consensus 595 ~Ga~~~l~~~ 604 (848)
+|++.+..+.
T Consensus 677 ~GAdv~~~~~ 686 (823)
T PLN03192 677 NGADVDKANT 686 (823)
T ss_pred cCCCCCCCCC
Confidence 9999877664
No 12
>PHA02741 hypothetical protein; Provisional
Probab=99.70 E-value=1.2e-16 Score=160.36 Aligned_cols=127 Identities=20% Similarity=0.165 Sum_probs=112.9
Q ss_pred ccccchHHHHHHcCCcHHHHHHHH---H----cCCCCccccCCCCchHHHHHHcCC----HHHHHHHHHCCCCCccccC-
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERV---V----EGSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDK- 532 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L---~----~Ga~in~~D~~G~T~LH~Aa~~G~----~~~v~~LL~~Ga~in~~D~- 532 (848)
..+.++||.++..++.. +++.| . .|++++..|..|.||||+|+..|+ .+++++|+..|+++|.+|.
T Consensus 19 ~~g~t~Lh~Aa~~g~~~--~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 19 SEGENFFHEAARCGCFD--IIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred cCCCCHHHHHHHcCCHH--HHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 35788999999998876 34433 1 268899999999999999999998 5889999999999999985
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 533 YGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 533 ~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
.|+||||+|+..|+.+++++|+. .|++++. +|..|.||||+|...|+.+++++|++.++..
T Consensus 97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~------~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHF------CNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc------CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999997 5999988 8899999999999999999999999988764
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.70 E-value=1.9e-16 Score=180.91 Aligned_cols=129 Identities=19% Similarity=0.206 Sum_probs=103.9
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.+|++.|+..++.. +++.|++ |++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 101 ~g~tpL~~A~~~~~~~--iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~ 178 (413)
T PHA02875 101 DGMTPLHLATILKKLD--IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAK 178 (413)
T ss_pred CCCCHHHHHHHhCCHH--HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Confidence 4667888888777665 5555555 888888888888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCC-CCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G-~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
|+.+++++|++.|++++. .+..| .||+|+|+..|+.+++++|+++|++.++.
T Consensus 179 g~~eiv~~Ll~~ga~~n~------~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 179 GDIAICKMLLDSGANIDY------FGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred CCHHHHHHHHhCCCCCCc------CCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 888888888888888887 45555 47788888888888888888888887654
No 14
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.69 E-value=6.2e-17 Score=159.65 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=109.1
Q ss_pred cccchHHHHHHcCCcHHHHHHHH-Hc---CCCCccccCCCCchHHHHHHcCCH---HHHHHHHHCCCCCcccc-CCCCcH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERV-VE---GSKTTEYDVHGQGVIHLCAMLGYT---WAILLFSWSGLSLDFRD-KYGWTA 537 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L-~~---Ga~in~~D~~G~T~LH~Aa~~G~~---~~v~~LL~~Ga~in~~D-~~G~Tp 537 (848)
.+.+|||.|+..++..+.+...- .. +..++..|..|.||||+|+..|+. +++++|+..|+++|.+| ..|+||
T Consensus 16 ~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~ 95 (154)
T PHA02736 16 EGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTP 95 (154)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcH
Confidence 47899999999998654333211 11 112345789999999999999986 46889999999999998 499999
Q ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003098 538 LHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 600 (848)
||+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 96 Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 96 LHIAVYTQNYELATWLCNQPGVNMEI------LNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHhCCHHHHHHHHhCCCCCCcc------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999998 5999988 88999999999999999999999999998865
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2e-16 Score=180.75 Aligned_cols=133 Identities=18% Similarity=0.245 Sum_probs=119.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCcc-ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
..+.++++.|+..++.. +++.|+. |++++. .+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+
T Consensus 66 ~~~~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~ 143 (413)
T PHA02875 66 PDIESELHDAVEEGDVK--AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAV 143 (413)
T ss_pred CCcccHHHHHHHCCCHH--HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Confidence 45678999999888876 4555555 776644 6778999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 144 ~~~~~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~ 200 (413)
T PHA02875 144 MMGDIKGIELLIDHKACLDI------EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKN 200 (413)
T ss_pred HcCCHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCC
Confidence 99999999999999999988 8899999999999999999999999999999876543
No 16
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.68 E-value=4.7e-16 Score=179.06 Aligned_cols=139 Identities=20% Similarity=0.134 Sum_probs=110.8
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+
T Consensus 121 ~~~g~T~Lh~A~~~~~~~--~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~ 198 (434)
T PHA02874 121 DAELKTFLHYAIKKGDLE--SIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAA 198 (434)
T ss_pred CCCCccHHHHHHHCCCHH--HHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 345778888888877765 4555555 8999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCC-------------------------CCCCCCCCCCCCHHHHHHHcC-ChHHHHHHHhhh
Q 003098 543 YYGREKMVVDLLSAGAKPNLV-------------------------TDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQA 596 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~-------------------------td~~~~d~~G~TpL~lA~~~G-~~~iv~lLle~G 596 (848)
..|+.+++++|++.|++++.. .+++.+|..|.||||+|+..+ +.+++++|+++|
T Consensus 199 ~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~g 278 (434)
T PHA02874 199 EYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHK 278 (434)
T ss_pred HcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCc
Confidence 999999999999999887653 144556777777777777764 667788888877
Q ss_pred hhhccccc
Q 003098 597 LVAQFNDM 604 (848)
Q Consensus 597 a~~~l~~~ 604 (848)
++.+..+.
T Consensus 279 ad~n~~d~ 286 (434)
T PHA02874 279 ADISIKDN 286 (434)
T ss_pred CCCCCCCC
Confidence 77766554
No 17
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.68 E-value=4.4e-16 Score=181.51 Aligned_cols=129 Identities=20% Similarity=0.142 Sum_probs=116.0
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc-
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY- 544 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~- 544 (848)
+.+|||.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..
T Consensus 168 g~tpLh~A~~~~~~~--iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~ 245 (477)
T PHA02878 168 GNTALHYATENKDQR--LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYC 245 (477)
T ss_pred CCCHHHHHHhCCCHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhc
Confidence 788999999888766 5666666 999999999999999999999999999999999999999999999999999976
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~-~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
++.+++++|+++|++++. ++. .|.||||+| .++.+++++|+++|++++..+..
T Consensus 246 ~~~~iv~~Ll~~gadvn~------~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~ 299 (477)
T PHA02878 246 KDYDILKLLLEHGVDVNA------KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSY 299 (477)
T ss_pred CCHHHHHHHHHcCCCCCc------cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCC
Confidence 799999999999999998 554 799999999 57889999999999998776543
No 18
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.67 E-value=8.3e-16 Score=179.19 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=105.8
Q ss_pred HHHHHHc-CCCCccccCC-CCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003098 484 LLERVVE-GSKTTEYDVH-GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPN 561 (848)
Q Consensus 484 Ll~~L~~-Ga~in~~D~~-G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in 561 (848)
+++.|++ |++++..|.. |.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 4444555 9999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHc-CChHHHHHHHhhhhhhcccc
Q 003098 562 LVTDPTSQNPGGLNAADIASKK-GFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 562 ~~td~~~~d~~G~TpL~lA~~~-G~~~iv~lLle~Ga~~~l~~ 603 (848)
. +|..|.||||+|+.. ++.+++++|+++|++++..+
T Consensus 229 ~------~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~ 265 (477)
T PHA02878 229 A------RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS 265 (477)
T ss_pred C------CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence 8 889999999999976 78999999999999987654
No 19
>PHA02798 ankyrin-like protein; Provisional
Probab=99.66 E-value=7.5e-16 Score=180.08 Aligned_cols=155 Identities=15% Similarity=0.107 Sum_probs=121.8
Q ss_pred HHHHHHhCCCCCC----cccccchHHHHHHcCC--cHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC---HHHHHHH
Q 003098 451 AYLFKSVGDKRTS----LPEAKDSFFELTLKSK--LKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY---TWAILLF 520 (848)
Q Consensus 451 ~~li~~l~~~~~~----~~~~~~~ll~aa~~~~--l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~---~~~v~~L 520 (848)
.++++.+...+.+ ...+.+|||.++..+. ..+ ++..|++ |++++..|..|.||||+|+..|+ .+++++|
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~-iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~L 167 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLE-ILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLL 167 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHH-HHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHH
Confidence 4556655444433 3457788888877653 334 4444444 99999999999999999999887 8999999
Q ss_pred HHCCCCCcccc-CCCCcHHHHHHHc----CCHHHHHHHHHcCCCCCCC--------------------------------
Q 003098 521 SWSGLSLDFRD-KYGWTALHWAAYY----GREKMVVDLLSAGAKPNLV-------------------------------- 563 (848)
Q Consensus 521 L~~Ga~in~~D-~~G~TpLh~Aa~~----G~~eiv~~LL~~GA~in~~-------------------------------- 563 (848)
++.|++++..+ ..|.||||.++.. ++.+++++|+++|++++..
T Consensus 168 l~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~ 247 (489)
T PHA02798 168 LEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS 247 (489)
T ss_pred HHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh
Confidence 99999998875 4688999988764 4789999999999887652
Q ss_pred -CCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003098 564 -TDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 564 -td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l 606 (848)
.|++.+|..|.||||+|+..|+.+++++|+++|++++..+...
T Consensus 248 ~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G 291 (489)
T PHA02798 248 YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELG 291 (489)
T ss_pred cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCC
Confidence 1567789999999999999999999999999999988776543
No 20
>PHA02795 ankyrin-like protein; Provisional
Probab=99.66 E-value=1.1e-15 Score=172.12 Aligned_cols=183 Identities=17% Similarity=0.068 Sum_probs=136.6
Q ss_pred HHHHHHHhccccccccccCCCCCCChHHHHHHhh-hhhcCCCCHHHHHHHhCCCCCCc--ccccchHHHHHHcCCcHHHH
Q 003098 408 MRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFAS-KSTCISNSWAYLFKSVGDKRTSL--PEAKDSFFELTLKSKLKEWL 484 (848)
Q Consensus 408 ~Rl~~LL~~~~~~l~il~sk~~~~~l~e~~~~~~-~i~~~~~~~~~li~~l~~~~~~~--~~~~~~ll~aa~~~~l~e~L 484 (848)
.+++++|.+......+.+.-..... ..+.+. .......+..++++.+.+.+.+. ....+++|.++..++.. +
T Consensus 90 k~~~~~l~s~~~~~~~~~~~~~~~~---~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~e--I 164 (437)
T PHA02795 90 KDIISALVSKNYMEDIFSIIIKNCN---SVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESS--V 164 (437)
T ss_pred HHHHHHHHhcccccchhhhhhhccc---cccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHH--H
Confidence 4677888777766553332111110 011111 11112246677777776666553 34467888888777655 6
Q ss_pred HHHHHc-CCCCcc-c-----cCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 003098 485 LERVVE-GSKTTE-Y-----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAG 557 (848)
Q Consensus 485 l~~L~~-Ga~in~-~-----D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~G 557 (848)
++.|+. |++.+. . +..|.|++|.|+..++.+++++|+.+|+++|.+|..|.||||+|+..|+.+++++|+++|
T Consensus 165 Vk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G 244 (437)
T PHA02795 165 VEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENG 244 (437)
T ss_pred HHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 666666 874332 2 245889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHcC--------ChHHHHHHHhhhhhhcc
Q 003098 558 AKPNLVTDPTSQNPGGLNAADIASKKG--------FDGLAAFLSEQALVAQF 601 (848)
Q Consensus 558 A~in~~td~~~~d~~G~TpL~lA~~~G--------~~~iv~lLle~Ga~~~l 601 (848)
|+++. +|..|.||||+|+..| |.+++++|+++|++.+.
T Consensus 245 AdIN~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 245 ANVNA------VMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred CCCCC------cCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence 99999 8899999999999998 46999999999986644
No 21
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.66 E-value=1.5e-15 Score=176.75 Aligned_cols=149 Identities=17% Similarity=0.187 Sum_probs=119.6
Q ss_pred CCHHHHHHHhCCCCCC----cccccchHHHHHHcC--CcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHH
Q 003098 448 NSWAYLFKSVGDKRTS----LPEAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLF 520 (848)
Q Consensus 448 ~~~~~li~~l~~~~~~----~~~~~~~ll~aa~~~--~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~L 520 (848)
.+..++++.+...+.+ ...+.++++.|+..+ +.. +++.|++ |++++..|..|.||||+|+..|+.+++++|
T Consensus 118 ~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~--iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~L 195 (480)
T PHA03100 118 SNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK--ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFL 195 (480)
T ss_pred cChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH--HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHH
Confidence 3445555555444433 345667788887777 443 4555555 899998888999999999999999999999
Q ss_pred HHCCCCCccccCCC------CcHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHH
Q 003098 521 SWSGLSLDFRDKYG------WTALHWAAYYGR--EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFL 592 (848)
Q Consensus 521 L~~Ga~in~~D~~G------~TpLh~Aa~~G~--~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lL 592 (848)
+++|++++..+..| .||||+|+..|+ .+++++|++.|++++. +|..|.||||+|+..|+.+++++|
T Consensus 196 l~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~------~d~~g~TpL~~A~~~~~~~iv~~L 269 (480)
T PHA03100 196 LDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI------KDVYGFTPLHYAVYNNNPEFVKYL 269 (480)
T ss_pred HHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999888888 889999999998 9999999999998888 788899999999999999999999
Q ss_pred Hhhhhhhccccc
Q 003098 593 SEQALVAQFNDM 604 (848)
Q Consensus 593 le~Ga~~~l~~~ 604 (848)
+++|++++..+.
T Consensus 270 l~~gad~n~~d~ 281 (480)
T PHA03100 270 LDLGANPNLVNK 281 (480)
T ss_pred HHcCCCCCccCC
Confidence 999988776654
No 22
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.66 E-value=2.1e-15 Score=173.74 Aligned_cols=107 Identities=18% Similarity=0.135 Sum_probs=101.4
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|++++. .|
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~------~~ 187 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV------KD 187 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC------CC
Confidence 677888999999999999999999999999999999999999999999999999999999999999999988 78
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
..|.||||+|+..|+.+++++|++.|++....+
T Consensus 188 ~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~ 220 (434)
T PHA02874 188 NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKC 220 (434)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCC
Confidence 999999999999999999999999998865544
No 23
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.65 E-value=4.4e-16 Score=169.46 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=120.8
Q ss_pred CCHHHHHHHhCCCCCC----cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHH
Q 003098 448 NSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW 522 (848)
Q Consensus 448 ~~~~~li~~l~~~~~~----~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~ 522 (848)
.++.++++.+...+.+ .....+||..||+.|++. +++.|++ |+|++..|..|+|.||+||..|+.+++++|++
T Consensus 94 AGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~le--ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle 171 (615)
T KOG0508|consen 94 AGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLE--IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLE 171 (615)
T ss_pred cCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhH--HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHH
Confidence 4566777776444433 333458999999999987 5666666 99999999999999999999999999999999
Q ss_pred CCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHh
Q 003098 523 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 594 (848)
Q Consensus 523 ~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle 594 (848)
.|+|+|.++..|.|+||.++..|+.+++++|+++|+.+.. |..|.|||..|+..|+.+++++|+.
T Consensus 172 ~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-------d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 172 QGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-------DGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred hCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee-------cCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999999999999999999999999999999875 6789999999999999999999996
No 24
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.6e-15 Score=157.55 Aligned_cols=129 Identities=12% Similarity=0.127 Sum_probs=110.6
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcC--CHHHHHHHHHCCCCCcccc-CCCCcHHHHHHH
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGLSLDFRD-KYGWTALHWAAY 543 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G--~~~~v~~LL~~Ga~in~~D-~~G~TpLh~Aa~ 543 (848)
..+||+.|+..+++. +++.|+.. ++..|..|.||||+|+..+ +.+++++|++.|+++|.++ ..|+||||+|+.
T Consensus 21 ~~~pL~~A~~~~~~~--~vk~Li~~--~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 21 YCNPLFYYVEKDDIE--GVKKWIKF--VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS 96 (209)
T ss_pred cCcHHHHHHHhCcHH--HHHHHHHh--hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence 567899999888876 45555542 5678899999999999865 8999999999999999997 489999999886
Q ss_pred c---CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH--cCChHHHHHHHhhhhhhcccccc
Q 003098 544 Y---GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 544 ~---G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~--~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
. ++.+++++|+++|++++. +|..|.||||+|+. .++.+++++|+++|++.+..+..
T Consensus 97 ~~~~~~~eiv~~Ll~~gadin~------~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~ 157 (209)
T PHA02859 97 FNKNVEPEILKILIDSGSSITE------EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFD 157 (209)
T ss_pred hCccccHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCC
Confidence 4 479999999999999998 88999999999876 47899999999999998776543
No 25
>PHA03095 ankyrin-like protein; Provisional
Probab=99.64 E-value=1.7e-15 Score=175.79 Aligned_cols=131 Identities=18% Similarity=0.246 Sum_probs=114.1
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCH--HHHHHHHHCCCCCccccCCCCcHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYT--WAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~--~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
..+.++++.++.......-+++.|+. |++++..|..|.||||+||..|.. .++..|+..|+++|.+|..|+||||+|
T Consensus 185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A 264 (471)
T PHA03095 185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYA 264 (471)
T ss_pred CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 45677888877654332225555555 999999999999999999999974 578899999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcc
Q 003098 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l 601 (848)
+..|+.+++++|++.||+++. +|..|.||||+|+..|+.+++++|++++++...
T Consensus 265 ~~~~~~~~v~~LL~~gad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~ 318 (471)
T PHA03095 265 AVFNNPRACRRLIALGADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNPSAET 318 (471)
T ss_pred HHcCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHH
Confidence 999999999999999999998 889999999999999999999999999987654
No 26
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.64 E-value=3e-15 Score=175.23 Aligned_cols=192 Identities=14% Similarity=0.075 Sum_probs=137.9
Q ss_pred HHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHHHHHHHhCCCCCC----cccccchHHHHHHcCC--cH
Q 003098 408 MRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSK--LK 481 (848)
Q Consensus 408 ~Rl~~LL~~~~~~l~il~sk~~~~~l~e~~~~~~~i~~~~~~~~~li~~l~~~~~~----~~~~~~~ll~aa~~~~--l~ 481 (848)
..++++|...+.+++..+...+| +.-+. ........+..++++.+...+.+ ...+.+||+.++..+. ..
T Consensus 50 ~~iv~~Ll~~GAdvn~~~~~~tp--L~~a~---~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~ 124 (494)
T PHA02989 50 IKIVKLLIDNGADVNYKGYIETP--LCAVL---RNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNC 124 (494)
T ss_pred hHHHHHHHHcCCCccCCCCCCCc--HHHHH---hccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcH
Confidence 36777777766665543322111 11110 00000112344555555444433 3457788887765532 23
Q ss_pred HHHHHHHHc-CCCC-ccccCCCCchHHHHHHc--CCHHHHHHHHHCCCCCcc-ccCCCCcHHHHHHHc----CCHHHHHH
Q 003098 482 EWLLERVVE-GSKT-TEYDVHGQGVIHLCAML--GYTWAILLFSWSGLSLDF-RDKYGWTALHWAAYY----GREKMVVD 552 (848)
Q Consensus 482 e~Ll~~L~~-Ga~i-n~~D~~G~T~LH~Aa~~--G~~~~v~~LL~~Ga~in~-~D~~G~TpLh~Aa~~----G~~eiv~~ 552 (848)
+ +++.|++ |+++ +..|..|.||||+|+.. ++.++|++|+++|++++. .+..|.||||+|+.. ++.+++++
T Consensus 125 e-iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~ 203 (494)
T PHA02989 125 D-MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKY 203 (494)
T ss_pred H-HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHH
Confidence 3 5555555 9999 78999999999998764 688999999999999998 688999999999876 48999999
Q ss_pred HHHcCCCCCCCC--------------------------------CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003098 553 LLSAGAKPNLVT--------------------------------DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 553 LL~~GA~in~~t--------------------------------d~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 600 (848)
|++.|++++..+ |++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 204 Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin 283 (494)
T PHA02989 204 LIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIY 283 (494)
T ss_pred HHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcc
Confidence 999999987643 457788999999999999999999999999999988
Q ss_pred ccccc
Q 003098 601 FNDMT 605 (848)
Q Consensus 601 l~~~~ 605 (848)
..+..
T Consensus 284 ~~d~~ 288 (494)
T PHA02989 284 NVSKD 288 (494)
T ss_pred ccCCC
Confidence 77643
No 27
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.64 E-value=2e-15 Score=180.52 Aligned_cols=134 Identities=14% Similarity=0.070 Sum_probs=112.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHH-----------------------------------
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLC----------------------------------- 508 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~A----------------------------------- 508 (848)
..+.+||+.|+..++...-+++.|++ |+++|.+|..|+||||+|
T Consensus 210 ~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i 289 (764)
T PHA02716 210 NHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYI 289 (764)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHH
Confidence 45788999999888652225555555 999999999999999975
Q ss_pred --HHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH--
Q 003098 509 --AMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK-- 582 (848)
Q Consensus 509 --a~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~--~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~-- 582 (848)
+..|+.+++++|++.|+++|.+|..|+||||+|+. .++.+++++|++.|++++. +|..|.||||+|+.
T Consensus 290 ~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~------kD~~G~TPLH~A~~~l 363 (764)
T PHA02716 290 TLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE------PDNIGNTVLHTYLSML 363 (764)
T ss_pred HHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc------CCCCCCCHHHHHHHhh
Confidence 34577889999999999999999999999999865 4688999999999999988 88999999999865
Q ss_pred ------------cCChHHHHHHHhhhhhhccccc
Q 003098 583 ------------KGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 583 ------------~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.++.+++++|+++|++++..+.
T Consensus 364 av~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~ 397 (764)
T PHA02716 364 SVVNILDPETDNDIRLDVIQCLISLGADITAVNC 397 (764)
T ss_pred hhhccccccccccChHHHHHHHHHCCCCCCCcCC
Confidence 3788999999999999877664
No 28
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.63 E-value=2.5e-15 Score=163.01 Aligned_cols=121 Identities=16% Similarity=0.110 Sum_probs=105.6
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccc----cCCCCchHHHHHHcCCHHHHHHHHHCCCCCccc-cCCCCcHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEY----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALH 539 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~----D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~-D~~G~TpLh 539 (848)
.+.++++++|.+.+..+ +++.|++ |+++|.. |..|.||||+|+..|+.+++++|+.+|+++|.. +..|.||||
T Consensus 31 ~~~~~lL~~A~~~~~~e-ivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh 109 (300)
T PHA02884 31 ICIANILYSSIKFHYTD-IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLY 109 (300)
T ss_pred CCCCHHHHHHHHcCCHH-HHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHH
Confidence 46677777777765555 5555555 9999997 458999999999999999999999999999986 468999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 593 (848)
+|+..|+.+++++|+..||+++. +|..|.||||+|+..++..++.++.
T Consensus 110 ~Aa~~~~~eivklLL~~GAdin~------kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 110 ISVLHGCLKCLEILLSYGADINI------QTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHhCChhHHHHhc
Confidence 99999999999999999999998 8899999999999999998876664
No 29
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.63 E-value=2.8e-15 Score=174.54 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=126.5
Q ss_pred CCHHHHHHHhCCCCCC----cccccchHHH-----HHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHH--HcCCHH
Q 003098 448 NSWAYLFKSVGDKRTS----LPEAKDSFFE-----LTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCA--MLGYTW 515 (848)
Q Consensus 448 ~~~~~li~~l~~~~~~----~~~~~~~ll~-----aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa--~~G~~~ 515 (848)
.+..++++.+.+.+.+ ...+.++++. ++..++.. +++.|++ |++++..|..|.||||+|+ ..|+.+
T Consensus 45 ~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~--iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~ 122 (480)
T PHA03100 45 ARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKE--IVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYS 122 (480)
T ss_pred cCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHH--HHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHH
Confidence 4445556655444433 2345677877 77776655 5555555 9999999999999999999 999999
Q ss_pred HHHHHHHCCCCCccccCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003098 516 AILLFSWSGLSLDFRDKYGWTALHWAAYYG--REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 516 ~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G--~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 593 (848)
++++|++.|++++..|..|.||||+|+..| +.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+
T Consensus 123 iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~------~d~~g~tpL~~A~~~~~~~iv~~Ll 196 (480)
T PHA03100 123 IVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA------KNRYGYTPLHIAVEKGNIDVIKFLL 196 (480)
T ss_pred HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc------ccCCCCCHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999998 7789999999999999999999999
Q ss_pred hhhhhhcccc
Q 003098 594 EQALVAQFND 603 (848)
Q Consensus 594 e~Ga~~~l~~ 603 (848)
++|+++...+
T Consensus 197 ~~ga~~~~~~ 206 (480)
T PHA03100 197 DNGADINAGD 206 (480)
T ss_pred HcCCCccCCC
Confidence 9999887654
No 30
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.62 E-value=2.5e-15 Score=179.71 Aligned_cols=151 Identities=15% Similarity=0.025 Sum_probs=119.7
Q ss_pred CCHHHHHHHhCCCC-CC-----cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC--HHHHH
Q 003098 448 NSWAYLFKSVGDKR-TS-----LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAIL 518 (848)
Q Consensus 448 ~~~~~li~~l~~~~-~~-----~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~--~~~v~ 518 (848)
+...++++.+.+.+ .+ ...+.++||.++.......-+++.|++ |+++|..|..|.||||+|+..|+ .++|+
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk 231 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIK 231 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence 34456666665544 22 234667787665443221115566665 99999999999999999999995 58999
Q ss_pred HHHHCCCCCccccCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHHcCCCCC
Q 003098 519 LFSWSGLSLDFRDKYGWTALHWA-------------------------------------AYYGREKMVVDLLSAGAKPN 561 (848)
Q Consensus 519 ~LL~~Ga~in~~D~~G~TpLh~A-------------------------------------a~~G~~eiv~~LL~~GA~in 561 (848)
+|+++|+++|.+|..|+||||+| +..|+.+++++|++.|++++
T Consensus 232 lLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN 311 (764)
T PHA02716 232 KIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH 311 (764)
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee
Confidence 99999999999999999999975 34588899999999999998
Q ss_pred CCCCCCCCCCCCCCHHHHHHH--cCChHHHHHHHhhhhhhccccc
Q 003098 562 LVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 562 ~~td~~~~d~~G~TpL~lA~~--~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
. +|..|.||||+|+. .++.+++++|+++|++.+..+.
T Consensus 312 ~------kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~ 350 (764)
T PHA02716 312 Y------KDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDN 350 (764)
T ss_pred c------cCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCC
Confidence 8 88999999999764 5688999999999999877664
No 31
>PHA02946 ankyin-like protein; Provisional
Probab=99.62 E-value=4.8e-15 Score=170.91 Aligned_cols=131 Identities=11% Similarity=0.091 Sum_probs=85.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC--HHHHHHHHHCCCCCcc-ccCCCCcHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAILLFSWSGLSLDF-RDKYGWTALHW 540 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~--~~~v~~LL~~Ga~in~-~D~~G~TpLh~ 540 (848)
..+.+|||.|+..++.. +++.|++ |+++|.+|..|.||||+|+..+. .+++++|+++|+++|. .|..|.||||
T Consensus 70 ~~G~TpLh~Aa~~g~~e--iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~- 146 (446)
T PHA02946 70 DDGNYPLHIASKINNNR--IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL- 146 (446)
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-
Confidence 34566666666666544 4444444 66777667777777776665543 5666667777777664 4666677775
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC--ChHHHHHHHhhhhhhccccc
Q 003098 541 AAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 541 Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G--~~~iv~lLle~Ga~~~l~~~ 604 (848)
||..|+.+++++|++.|++++. +|..|.||||+|+..+ +.+++++|+++|++++..+.
T Consensus 147 aa~~~~~~vv~~Ll~~gad~~~------~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~ 206 (446)
T PHA02946 147 ACTDPSERVFKKIMSIGFEARI------VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDH 206 (446)
T ss_pred HHHCCChHHHHHHHhccccccc------cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCC
Confidence 5555666777777777766666 6777788887776544 35677778887777766553
No 32
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.61 E-value=1e-15 Score=166.73 Aligned_cols=129 Identities=15% Similarity=0.211 Sum_probs=117.1
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
+-.|+.-|+..|++. +++.|+. |+++|.......|||-.||.-|+.++|++|+++|+|++..|..|.|.||+||..|
T Consensus 84 gappLWaAsaAGHl~--vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykG 161 (615)
T KOG0508|consen 84 GAPPLWAASAAGHLE--VVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKG 161 (615)
T ss_pred CCchhhHHhccCcHH--HHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccC
Confidence 445666666777776 6666666 9999998888899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 546 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 546 ~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
|.+|+++|++.|||+|. ++..|.|+||.|+..|+.+|+++|+.+|+......
T Consensus 162 h~~I~qyLle~gADvn~------ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~ 213 (615)
T KOG0508|consen 162 HVDIAQYLLEQGADVNA------KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG 213 (615)
T ss_pred chHHHHHHHHhCCCcch------hcccCchHHHhhhhcccHHHHHHHHhCCceeeecC
Confidence 99999999999999999 88999999999999999999999999998775544
No 33
>PHA03095 ankyrin-like protein; Provisional
Probab=99.61 E-value=6.5e-15 Score=170.97 Aligned_cols=127 Identities=22% Similarity=0.213 Sum_probs=67.5
Q ss_pred ccchHHHHHHcC--CcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcC-CHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 467 AKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG-YTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 467 ~~~~ll~aa~~~--~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G-~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
+.++|+.++..+ ...+ +++.|++ |+++|..|..|.||||+|+..| ..+++++|++.|+++|.+|..|.||||+|+
T Consensus 47 g~t~Lh~a~~~~~~~~~~-iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~ 125 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKD-IVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYL 125 (471)
T ss_pred CCCHHHHHHHhcCCChHH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 445555555444 1222 3333333 5555555555556666655555 355555555555555555555556665555
Q ss_pred --HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC--ChHHHHHHHhhhhhhc
Q 003098 543 --YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQ 600 (848)
Q Consensus 543 --~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G--~~~iv~lLle~Ga~~~ 600 (848)
..++.+++++|++.|++++. .|..|.||||+|+..+ +.+++++|+++|++..
T Consensus 126 ~~~~~~~~iv~~Ll~~gad~~~------~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~ 181 (471)
T PHA03095 126 SGFNINPKVIRLLLRKGADVNA------LDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY 181 (471)
T ss_pred hCCcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc
Confidence 33455555555555555555 4555555555555443 3455555555555543
No 34
>PHA02946 ankyin-like protein; Provisional
Probab=99.60 E-value=7.4e-15 Score=169.41 Aligned_cols=146 Identities=14% Similarity=0.145 Sum_probs=104.1
Q ss_pred HHHHHHHhCCCCC----CcccccchHHHHHHcCC-cHHHHHHHHHc-CCCCcc-ccCCCCchHHHHHHcCCHHHHHHHHH
Q 003098 450 WAYLFKSVGDKRT----SLPEAKDSFFELTLKSK-LKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSW 522 (848)
Q Consensus 450 ~~~li~~l~~~~~----~~~~~~~~ll~aa~~~~-l~e~Ll~~L~~-Ga~in~-~D~~G~T~LH~Aa~~G~~~~v~~LL~ 522 (848)
..++++.+...+. ....+.+||+.++..+. ..+ +++.|++ |++++. .|..|.|||| ||..|+.+++++|++
T Consensus 84 ~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e-~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~ 161 (446)
T PHA02946 84 NNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIE-RINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMS 161 (446)
T ss_pred CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHH-HHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHh
Confidence 3455555533332 23456778887765543 223 4444554 888885 6788888887 566688888888888
Q ss_pred CCCCCccccCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC--ChHHHHHHHhhhhh
Q 003098 523 SGLSLDFRDKYGWTALHWAAYYG--REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALV 598 (848)
Q Consensus 523 ~Ga~in~~D~~G~TpLh~Aa~~G--~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G--~~~iv~lLle~Ga~ 598 (848)
.|++++.+|..|+||||+|+..+ +.+++++|++.|++++. +|..|.||||+|+..| +.+++++|++ |++
T Consensus 162 ~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~------~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gad 234 (446)
T PHA02946 162 IGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK------PDHDGNTPLHIVCSKTVKNVDIINLLLP-STD 234 (446)
T ss_pred ccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCC
Confidence 88888888888888888887654 46788888888888887 7788888888888875 6778888875 777
Q ss_pred hccccc
Q 003098 599 AQFNDM 604 (848)
Q Consensus 599 ~~l~~~ 604 (848)
.+..+.
T Consensus 235 in~~d~ 240 (446)
T PHA02946 235 VNKQNK 240 (446)
T ss_pred CCCCCC
Confidence 665554
No 35
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.60 E-value=3.2e-15 Score=181.90 Aligned_cols=244 Identities=17% Similarity=0.189 Sum_probs=166.2
Q ss_pred ceEEEcCCeecceeeeeCCeeeeecCCCCCceeEEEEEeCCCCCcccccccccCCCCCccCCCCccccchhhHHHH----
Q 003098 331 NMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQV---- 406 (848)
Q Consensus 331 ~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~~Sev~~Fey~~~~~~~~~~~~~~~~~~~~~~l---- 406 (848)
.+.|.-|.+++.--+...|...|.-+ .+|..||+++..... -.++..-+....-... -+....+.+++
T Consensus 379 ~la~~~g~~~~v~Lll~~ga~~~~~g--k~gvTplh~aa~~~~--~~~v~l~l~~gA~~~~----~~~lG~T~lhvaa~~ 450 (1143)
T KOG4177|consen 379 HLAVKSGRVSVVELLLEAGADPNSAG--KNGVTPLHVAAHYGN--PRVVKLLLKRGASPNA----KAKLGYTPLHVAAKK 450 (1143)
T ss_pred hhhcccCchhHHHhhhhccCCcccCC--CCCcceeeehhhccC--cceEEEEeccCCChhh----HhhcCCChhhhhhhc
Confidence 56677787777766777777522222 689999999885432 2233333332110000 00011122222
Q ss_pred --HHHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHHHHHHHhCCCC----CCcccccchHHHHHHcCCc
Q 003098 407 --QMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKR----TSLPEAKDSFFELTLKSKL 480 (848)
Q Consensus 407 --~~Rl~~LL~~~~~~l~il~sk~~~~~l~e~~~~~~~i~~~~~~~~~li~~l~~~~----~~~~~~~~~ll~aa~~~~l 480 (848)
+.+.+.++......++++... .+...-.....+|..+.+.+.+.. .+.+.+-++++.+...+..
T Consensus 451 g~~~~~~~~l~~~g~~~n~~s~~----------G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v 520 (1143)
T KOG4177|consen 451 GRYLQIARLLLQYGADPNAVSKQ----------GFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTV 520 (1143)
T ss_pred ccHhhhhhhHhhcCCCcchhccc----------cCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhH
Confidence 233444443333333322111 111111123456666666654433 3344556677777666655
Q ss_pred HHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 003098 481 KEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKP 560 (848)
Q Consensus 481 ~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~i 560 (848)
.. +...+..|++++.++..|.||||.||..|+..+|++||++|++++.+|+.|+||||.||..|+.+|+.+|+++||++
T Consensus 521 ~~-~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v 599 (1143)
T KOG4177|consen 521 KV-AKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV 599 (1143)
T ss_pred HH-HHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC
Confidence 42 33344459999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 561 NLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 561 n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
|. .|.+|.|||++|...|+.+++++|...|+++
T Consensus 600 na------~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 600 NA------ADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred Cc------ccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 99 8899999999999999999999999999884
No 36
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.60 E-value=1.1e-14 Score=170.57 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=92.6
Q ss_pred cccchHHHHHHcCCc-HHHHHHHHHc-CCCCcc-ccCCCCchHHHHHHcC----CHHHHHHHHHCCCC------------
Q 003098 466 EAKDSFFELTLKSKL-KEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLG----YTWAILLFSWSGLS------------ 526 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l-~e~Ll~~L~~-Ga~in~-~D~~G~T~LH~Aa~~G----~~~~v~~LL~~Ga~------------ 526 (848)
.+.+||+.++..... .+ +++.|++ |++++. .+..|.||||+|+..+ +.+++++|++.|++
T Consensus 144 ~g~tpLh~a~~~~~~~~~-iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l 222 (494)
T PHA02989 144 RGYNLLHMYLESFSVKKD-VIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVL 222 (494)
T ss_pred CCCCHHHHHHHhccCCHH-HHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHH
Confidence 345556555443221 22 3444444 666666 4566666666665443 56666666666555
Q ss_pred --------------------------CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003098 527 --------------------------LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 580 (848)
Q Consensus 527 --------------------------in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA 580 (848)
+|.+|..|+||||+|+..|+.+++++|++.||+++. +|..|.||||+|
T Consensus 223 ~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~------~d~~G~TpL~~A 296 (494)
T PHA02989 223 ESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYN------VSKDGDTVLTYA 296 (494)
T ss_pred HHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccc------cCCCCCCHHHHH
Confidence 455667799999999999999999999999999998 889999999999
Q ss_pred HHcCChHHHHHHHhhhhh
Q 003098 581 SKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 581 ~~~G~~~iv~lLle~Ga~ 598 (848)
+..|+.++++.|++.+..
T Consensus 297 ~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 297 IKHGNIDMLNRILQLKPG 314 (494)
T ss_pred HHcCCHHHHHHHHhcCCC
Confidence 999999999999997643
No 37
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.60 E-value=8.8e-15 Score=177.95 Aligned_cols=137 Identities=17% Similarity=0.070 Sum_probs=114.7
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
...+.++++.|+..++..+.+..++..|+++|..|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 338 d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~ 417 (682)
T PHA02876 338 DRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALC 417 (682)
T ss_pred ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHH
Confidence 34567888888877665553333333499999999999999999999999999999999999999999999999999987
Q ss_pred cCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-ChHHHHHHHhhhhhhccccccc
Q 003098 544 YGR-EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 544 ~G~-~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G-~~~iv~lLle~Ga~~~l~~~~l 606 (848)
.++ ..++++|++.|++++. +|..|.||||+|+..| +.+++++|+++|++.+..+...
T Consensus 418 ~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g 476 (682)
T PHA02876 418 GTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQN 476 (682)
T ss_pred cCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCC
Confidence 655 5678999999999988 8899999999999876 6899999999999988776543
No 38
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.60 E-value=3.9e-15 Score=143.42 Aligned_cols=127 Identities=20% Similarity=0.221 Sum_probs=104.7
Q ss_pred hHHHHHHcCCcHHHHHHHHHcCC-CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003098 470 SFFELTLKSKLKEWLLERVVEGS-KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~ll~aa~~~~l~e~Ll~~L~~Ga-~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
-++.++.++.+.+ +..+|...+ .+|.+|.+|.||||-|+.+|+.++|..|+..|++++.+...||||||-||..++.+
T Consensus 66 l~lwaae~nrl~e-V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTE-VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHH-HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence 4677778888774 444444444 58999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCh-HHHHHHHh-hhhhhcccc
Q 003098 549 MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD-GLAAFLSE-QALVAQFND 603 (848)
Q Consensus 549 iv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~-~iv~lLle-~Ga~~~l~~ 603 (848)
++..||++|||+|+ ......||||+|+...+. ..+.+|+. .+..+..++
T Consensus 145 va~~LLqhgaDVnA------~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~n 195 (228)
T KOG0512|consen 145 VAGRLLQHGADVNA------QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKN 195 (228)
T ss_pred HHHHHHhccCcccc------cccccchhhHHhhcccchHHHHHHHhhccccChhhhc
Confidence 99999999999999 447789999999987554 45566553 455544433
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.60 E-value=1.3e-15 Score=151.68 Aligned_cols=107 Identities=21% Similarity=0.100 Sum_probs=98.4
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
...+|.+|+.|.|||.||+.+|+.++|++||..|++++...+...|+|.+|+..|..+||++||.++.|+|+ -|
T Consensus 150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv------yD 223 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV------YD 223 (296)
T ss_pred hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce------ec
Confidence 677899999999999999999999999999999999999999999999999999999999999999999998 88
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
.+|.|||-+|+..||.+|++.|++.||++...+
T Consensus 224 wNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~ 256 (296)
T KOG0502|consen 224 WNGGTPLLYAVRGNHVKCVESLLNSGADVTQED 256 (296)
T ss_pred cCCCceeeeeecCChHHHHHHHHhcCCCccccc
Confidence 999999999999999999999999999875543
No 40
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.59 E-value=5.3e-15 Score=131.75 Aligned_cols=89 Identities=28% Similarity=0.343 Sum_probs=81.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 003098 505 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 584 (848)
Q Consensus 505 LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G 584 (848)
||+|+..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|++.|++++. +|..|.||||+|+..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence 7999999999999999999998887 89999999999999999999999999988 7899999999999999
Q ss_pred ChHHHHHHHhhhhhhcccc
Q 003098 585 FDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 585 ~~~iv~lLle~Ga~~~l~~ 603 (848)
+.+++++|+++|++.+.+|
T Consensus 71 ~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 71 NLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHHHHTTT-TTSS-
T ss_pred CHHHHHHHHHcCCCCCCcC
Confidence 9999999999999987654
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=99.58 E-value=7.8e-15 Score=171.56 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=100.8
Q ss_pred CHHHHHHHhCCCCCC----cccccchHHHHHHc----CCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcC---CHHH
Q 003098 449 SWAYLFKSVGDKRTS----LPEAKDSFFELTLK----SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG---YTWA 516 (848)
Q Consensus 449 ~~~~li~~l~~~~~~----~~~~~~~ll~aa~~----~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G---~~~~ 516 (848)
...++++.+...+.+ ...+.+||+.++.. .+..+ +++.|++ |+++|..|..|.||||+|+..| +.++
T Consensus 49 ~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~-iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~i 127 (489)
T PHA02798 49 PSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLD-IVKILIENGADINKKNSDGETPLYCLLSNGYINNLEI 127 (489)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHH-HHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHH
Confidence 344555555444433 23466677665532 11122 4444444 8888888888888888887765 5678
Q ss_pred HHHHHHCCCCCccccCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC----hHHH
Q 003098 517 ILLFSWSGLSLDFRDKYGWTALHWAAYYGR---EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGF----DGLA 589 (848)
Q Consensus 517 v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~---~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~----~~iv 589 (848)
+++|+++|++++.+|..|.||||+|+..|+ .+++++|++.|++++.. .+..|.||||.+...+. .+++
T Consensus 128 v~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~-----~~~~~~t~Lh~~~~~~~~~~~~~iv 202 (489)
T PHA02798 128 LLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTH-----NNKEKYDTLHCYFKYNIDRIDADIL 202 (489)
T ss_pred HHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccc-----cCcCCCcHHHHHHHhccccCCHHHH
Confidence 888888888888888888888888888777 78888888888887762 13567788887776543 4678
Q ss_pred HHHHhhhhhhccccc
Q 003098 590 AFLSEQALVAQFNDM 604 (848)
Q Consensus 590 ~lLle~Ga~~~l~~~ 604 (848)
++|+++|++.+..+.
T Consensus 203 k~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 203 KLFVDNGFIINKENK 217 (489)
T ss_pred HHHHHCCCCcccCCc
Confidence 888888877665443
No 42
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=1.3e-14 Score=167.21 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=118.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHH-CC-CCCccccCCCCcHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SG-LSLDFRDKYGWTALHWA 541 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~-~G-a~in~~D~~G~TpLh~A 541 (848)
.++-+|+|.+|-.|+.. .++.|+. |++++.+++++.||||.||..|...+|+-||+ .| ..+|..|-.|.||||.|
T Consensus 271 ~dg~tpLH~a~r~G~~~--svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHla 348 (929)
T KOG0510|consen 271 NDGCTPLHYAARQGGPE--SVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLA 348 (929)
T ss_pred ccCCchHHHHHHcCChh--HHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhh
Confidence 34778999999999877 4555666 99999999999999999999999999999998 55 45788999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
+..||..++++||.+||...... ..|.+|.||||+|+..|+..++++|+.+|++...++.
T Consensus 349 a~~gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~ 408 (929)
T KOG0510|consen 349 AKSGHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNK 408 (929)
T ss_pred hhcCHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccc
Confidence 99999999999999999987311 2489999999999999999999999999999866443
No 43
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.58 E-value=3.7e-15 Score=148.45 Aligned_cols=131 Identities=18% Similarity=0.213 Sum_probs=121.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.+||+.|+.+|++. ++++|++ |++++...+...++|.+|+..||.++|++||.+++|+|.-|-+|-|||-+|+.
T Consensus 158 e~GfTpLiWAaa~G~i~--vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvr 235 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIP--VVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVR 235 (296)
T ss_pred ccCchHhHHHHhcCchH--HHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeec
Confidence 34778999999999998 6777777 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.||.+|++.||..||+++. .+..|++++++|...|+. +++..+++-+...+.+.
T Consensus 236 gnhvkcve~Ll~sGAd~t~------e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~ 289 (296)
T KOG0502|consen 236 GNHVKCVESLLNSGADVTQ------EDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDS 289 (296)
T ss_pred CChHHHHHHHHhcCCCccc------ccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcc
Confidence 9999999999999999998 788999999999999998 88999998887766654
No 44
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.55 E-value=5e-14 Score=171.39 Aligned_cols=128 Identities=20% Similarity=0.232 Sum_probs=74.5
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC-HHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-TWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~-~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
+.++||.|+..++..+ ++..|+. |++++..|..|.||||+|+..|+ .+++++|+..|++++..|..|.||||+|+..
T Consensus 273 g~TpLh~Aa~~~~~~~-iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~ 351 (682)
T PHA02876 273 KNTPLHHASQAPSLSR-LVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTL 351 (682)
T ss_pred CCCHHHHHHhCCCHHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHh
Confidence 4555666655555443 2233332 66666666666666666666663 5566666666666666666666666666553
Q ss_pred -CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcc
Q 003098 545 -GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 545 -G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l 601 (848)
++.+++.+|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+.
T Consensus 352 ~~~~~iv~lLl~~gadin~------~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~ 403 (682)
T PHA02876 352 DRNKDIVITLLELGANVNA------RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEA 403 (682)
T ss_pred CCcHHHHHHHHHcCCCCcc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccc
Confidence 345566666666666655 555666666666666666666666666655544
No 45
>PHA02741 hypothetical protein; Provisional
Probab=99.54 E-value=2.5e-14 Score=143.56 Aligned_cols=105 Identities=24% Similarity=0.261 Sum_probs=93.6
Q ss_pred CccccCCCCchHHHHHHcCCHHHHHHHHH------CCCCCccccCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCCC
Q 003098 494 TTEYDVHGQGVIHLCAMLGYTWAILLFSW------SGLSLDFRDKYGWTALHWAAYYGR----EKMVVDLLSAGAKPNLV 563 (848)
Q Consensus 494 in~~D~~G~T~LH~Aa~~G~~~~v~~LL~------~Ga~in~~D~~G~TpLh~Aa~~G~----~eiv~~LL~~GA~in~~ 563 (848)
++..|..|.||||+||..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|++.|++++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~- 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA- 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence 45578899999999999999999998853 468999999999999999999999 5899999999999998
Q ss_pred CCCCCCCC-CCCCHHHHHHHcCChHHHHHHHh-hhhhhccccc
Q 003098 564 TDPTSQNP-GGLNAADIASKKGFDGLAAFLSE-QALVAQFNDM 604 (848)
Q Consensus 564 td~~~~d~-~G~TpL~lA~~~G~~~iv~lLle-~Ga~~~l~~~ 604 (848)
+|. .|.||||+|+..++.+++++|++ .|++.+..+.
T Consensus 93 -----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~ 130 (169)
T PHA02741 93 -----QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA 130 (169)
T ss_pred -----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 774 89999999999999999999998 5888766653
No 46
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.52 E-value=1.9e-14 Score=148.05 Aligned_cols=130 Identities=18% Similarity=0.250 Sum_probs=102.9
Q ss_pred CCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHH
Q 003098 462 TSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 540 (848)
Q Consensus 462 ~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~ 540 (848)
...+.+-.+||.+|..|+.. +++.|+. |+.+|..+....||||+||.+|+.++|..||+..+|+|+.+..|.|||||
T Consensus 29 ~gddhgfsplhwaakegh~a--ivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhy 106 (448)
T KOG0195|consen 29 VGDDHGFSPLHWAAKEGHVA--IVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHY 106 (448)
T ss_pred cccccCcchhhhhhhcccHH--HHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhh
Confidence 33455667888888777665 6666665 89999988888899999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 541 AAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 541 Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
||..|...+++-|+.+||.+++ .|+.|.|||+.|.-.-..-+.++-.++|-.+
T Consensus 107 acfwgydqiaedli~~ga~v~i------cnk~g~tpldkakp~l~~~l~e~aek~gq~~ 159 (448)
T KOG0195|consen 107 ACFWGYDQIAEDLISCGAAVNI------CNKKGMTPLDKAKPMLKNTLLEIAEKHGQSP 159 (448)
T ss_pred hhhhcHHHHHHHHHhccceeee------cccCCCCchhhhchHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999988 7889999998876443334444444555444
No 47
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.51 E-value=4.4e-14 Score=119.94 Aligned_cols=80 Identities=23% Similarity=0.357 Sum_probs=70.0
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCC-CCCceeEEEEEeCCCCCc
Q 003098 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HSPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pp-h~~G~Vpl~v~~~~~~~~ 375 (848)
.|+.++|+||+++||++|+|+|.+|.+ ++.|+||++.+-.++|++.+|+|.+|| |.||.|+++++.....-|
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~-------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~~ 74 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFC 74 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCC-------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceeec
Confidence 599999999999999999999988865 699999999999999999999999999 799999999999877666
Q ss_pred cc-cccccc
Q 003098 376 SQ-VLNFEY 383 (848)
Q Consensus 376 Se-v~~Fey 383 (848)
.. ...|-|
T Consensus 75 ~~~p~~f~y 83 (85)
T cd01175 75 KGTPGRFVY 83 (85)
T ss_pred cCCCceEEe
Confidence 43 233444
No 48
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.51 E-value=3.1e-14 Score=146.55 Aligned_cols=110 Identities=24% Similarity=0.172 Sum_probs=104.1
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
.-|.|.-|..|.+||||||..|+..+++.||.+|+.+|..+....||||+|+.+||.++|..|++..+|+|+ .|
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna------vn 97 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA------VN 97 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch------hh
Confidence 557888899999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003098 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l 606 (848)
..|.|||||||.-|+..|++-|+..||.+++-+...
T Consensus 98 ehgntplhyacfwgydqiaedli~~ga~v~icnk~g 133 (448)
T KOG0195|consen 98 EHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKG 133 (448)
T ss_pred ccCCCchhhhhhhcHHHHHHHHHhccceeeecccCC
Confidence 999999999999999999999999999998877544
No 49
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.51 E-value=7.6e-14 Score=148.22 Aligned_cols=139 Identities=21% Similarity=0.220 Sum_probs=110.9
Q ss_pred HHHHHHhCCCC-CCc----ccccchHHHHHHcC---CcHHHHHHHHHcCCCCccc-cCCCCchHHHHHHcCCHHHHHHHH
Q 003098 451 AYLFKSVGDKR-TSL----PEAKDSFFELTLKS---KLKEWLLERVVEGSKTTEY-DVHGQGVIHLCAMLGYTWAILLFS 521 (848)
Q Consensus 451 ~~li~~l~~~~-~~~----~~~~~~ll~aa~~~---~l~e~Ll~~L~~Ga~in~~-D~~G~T~LH~Aa~~G~~~~v~~LL 521 (848)
..+++.+.+.+ ++. ..+.++++.+++.. ....-++..|-.-+|+|.+ ...|+|+|++|+.+|..++|+.||
T Consensus 281 F~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LL 360 (452)
T KOG0514|consen 281 FDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALL 360 (452)
T ss_pred hHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHH
Confidence 34555555544 232 33677877766532 2222366677777789984 456999999999999999999999
Q ss_pred HCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003098 522 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 522 ~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 595 (848)
..|+|||.+|.+|.|+|++||.+||.+||++||. .++|+.+ .|.+|.|+|.+|...||.+|+-+|-.+
T Consensus 361 acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sL------tD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 361 ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISL------TDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccccee------ecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 9999999999999999999999999999999997 4677777 789999999999999999998877654
No 50
>PHA02795 ankyrin-like protein; Provisional
Probab=99.51 E-value=8.5e-14 Score=156.98 Aligned_cols=131 Identities=10% Similarity=-0.004 Sum_probs=110.9
Q ss_pred ccccchHHHHHH--cCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccc------cCCCC
Q 003098 465 PEAKDSFFELTL--KSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------DKYGW 535 (848)
Q Consensus 465 ~~~~~~ll~aa~--~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~------D~~G~ 535 (848)
+...++||.++. .++.. +++.|+. |++++.. .+.||||.|+..|+.+++++|+++|++++.. +..|.
T Consensus 114 ~~~~~~L~~~~~n~~n~~e--iV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~ 189 (437)
T PHA02795 114 NSVQDLLLYYLSNAYVEID--IVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQY 189 (437)
T ss_pred ccccHHHHHHHHhcCCCHH--HHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhcc
Confidence 446677777777 33433 5666666 9999984 4589999999999999999999999854322 24588
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 536 TALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 536 TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
||+|.|+..++.+++++|+++||++|. +|..|.||||+|+..|+.+++++|+++|++.+..+..
T Consensus 190 t~l~~a~~~~~~eIve~LIs~GADIN~------kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~ 253 (437)
T PHA02795 190 TRGFLVDEPTVLEIYKLCIPYIEDINQ------LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSN 253 (437)
T ss_pred chhHHHHhcCHHHHHHHHHhCcCCcCc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 999999999999999999999999998 8899999999999999999999999999999887653
No 51
>PHA02917 ankyrin-like protein; Provisional
Probab=99.51 E-value=1.1e-13 Score=166.21 Aligned_cols=151 Identities=10% Similarity=-0.047 Sum_probs=113.7
Q ss_pred CHHHHHHHhCCCCCC----cccccchHHHHHHcCCcH--HHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHH
Q 003098 449 SWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 521 (848)
Q Consensus 449 ~~~~li~~l~~~~~~----~~~~~~~ll~aa~~~~l~--e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL 521 (848)
+..++++.+...+.+ ...+.+||+.++..++.. ..+++.|++ +...|..|. .+++|+|+..|+.++|++|+
T Consensus 46 ~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll 123 (661)
T PHA02917 46 NNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLV 123 (661)
T ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHH
Confidence 445556655444332 345778999999988643 234555654 444444332 37778899999999999999
Q ss_pred HCCCCCccccCCCCcHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC-----------CCHHHHHHH------
Q 003098 522 WSGLSLDFRDKYGWTALHWAA--YYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-----------LNAADIASK------ 582 (848)
Q Consensus 522 ~~Ga~in~~D~~G~TpLh~Aa--~~G~~eiv~~LL~~GA~in~~td~~~~d~~G-----------~TpL~lA~~------ 582 (848)
++|+++|.+|.+|+||||+|+ ..|+.+++++|+++||+++.... .+..| .||||+|+.
T Consensus 124 ~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~---~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~ 200 (661)
T PHA02917 124 EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE---DDEYGYAYDDYQPRNCGTVLHLYIISHLYSE 200 (661)
T ss_pred HcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc---ccccccccccccccccccHHHHHHhhccccc
Confidence 999999999999999999654 46899999999999999986221 22334 699999986
Q ss_pred -----cCChHHHHHHHhhhhhhccccc
Q 003098 583 -----KGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 583 -----~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.++.+++++|+++|++.+..+.
T Consensus 201 ~~~~~~~~~eiv~~Li~~Gadvn~~d~ 227 (661)
T PHA02917 201 SDTRAYVRPEVVKCLINHGIKPSSIDK 227 (661)
T ss_pred ccccccCcHHHHHHHHHCCCCcccCCC
Confidence 5689999999999999988764
No 52
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.49 E-value=6.7e-14 Score=170.56 Aligned_cols=141 Identities=20% Similarity=0.248 Sum_probs=122.2
Q ss_pred CCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHH
Q 003098 461 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 539 (848)
Q Consensus 461 ~~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh 539 (848)
+.....+.++|+.++..++.. +...+++ ++..+...+.|.|+||+|+..++..++..++.+|++++.++..|+||||
T Consensus 468 n~~s~~G~T~Lhlaaq~Gh~~--~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh 545 (1143)
T KOG4177|consen 468 NAVSKQGFTPLHLAAQEGHTE--VVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLH 545 (1143)
T ss_pred chhccccCcchhhhhccCCch--HHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHH
Confidence 344567778888888888766 3444444 6677777778888888888888888888888999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccccccc
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN 609 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~~~ 609 (848)
.||.+|+..+|++||++||++++ +++.|+||||.|+..|+.+|+.+|+++||+++..+..-...
T Consensus 546 ~A~~~g~v~~VkfLLe~gAdv~a------k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~Tp 609 (1143)
T KOG4177|consen 546 VAVHYGNVDLVKFLLEHGADVNA------KDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTP 609 (1143)
T ss_pred HHHhcCCchHHHHhhhCCccccc------cCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcch
Confidence 99999999999999999999999 88999999999999999999999999999999988766553
No 53
>PHA02917 ankyrin-like protein; Provisional
Probab=99.49 E-value=1.5e-13 Score=165.06 Aligned_cols=123 Identities=24% Similarity=0.206 Sum_probs=101.0
Q ss_pred hHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHH--HcCCHHHHHHHHHCCCCCccccC---CC---------
Q 003098 470 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCA--MLGYTWAILLFSWSGLSLDFRDK---YG--------- 534 (848)
Q Consensus 470 ~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa--~~G~~~~v~~LL~~Ga~in~~D~---~G--------- 534 (848)
++++.+..+...+ +++.|++ |+++|..|..|+||||.|+ ..|+.+++++|+++|+++|..|. .|
T Consensus 105 ~~~~~a~~~~~~e-~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 105 IFSYMKSKNVDVD-LIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR 183 (661)
T ss_pred hHHHHHhhcCCHH-HHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccc
Confidence 4444444443334 5666665 9999999999999999654 57899999999999999987653 34
Q ss_pred --CcHHHHHHH-----------cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCh--HHHHHHHhhhhhh
Q 003098 535 --WTALHWAAY-----------YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD--GLAAFLSEQALVA 599 (848)
Q Consensus 535 --~TpLh~Aa~-----------~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~--~iv~lLle~Ga~~ 599 (848)
.||||+|+. +|+.++|++|+++||+++. +|..|.||||+|+..|+. +++++|++ |++.
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~------~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~ 256 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS------IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDN 256 (661)
T ss_pred ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc------CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcc
Confidence 599999986 5689999999999999998 889999999999999996 79999985 7765
Q ss_pred c
Q 003098 600 Q 600 (848)
Q Consensus 600 ~ 600 (848)
.
T Consensus 257 ~ 257 (661)
T PHA02917 257 T 257 (661)
T ss_pred c
Confidence 3
No 54
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.48 E-value=1.3e-13 Score=158.90 Aligned_cols=131 Identities=21% Similarity=0.249 Sum_probs=108.4
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHcCCC---------------CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCc
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVEGSK---------------TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD 528 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~---------------in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in 528 (848)
.+++.+||+.|+-.++++ .+...|..|.. +|..|.+|.||||+||..|+.+++..|+..|++++
T Consensus 222 ~n~~~~pLhlAve~g~~e-~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~ 300 (929)
T KOG0510|consen 222 NNEKATPLHLAVEGGDIE-MLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASIN 300 (929)
T ss_pred cCCCCcchhhhhhcCCHH-HHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccc
Confidence 344666777766666554 35555544332 34468899999999999999999999999999999
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003098 529 FRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 529 ~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 600 (848)
.++.++.||||.||.+|+.++|+-||+ .|... .+..|..|.||||+|+..||..++++|+.+||...
T Consensus 301 ~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rl-----lne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 301 SKNKDEESPLHFAAIYGRINTVERLLQESDTRL-----LNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred ccCCCCCCchHHHHHcccHHHHHHHHhCcCccc-----cccccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence 999999999999999999999999998 44322 23489999999999999999999999999999876
No 55
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.48 E-value=1.9e-13 Score=145.26 Aligned_cols=131 Identities=19% Similarity=0.239 Sum_probs=109.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCCCchHHHHHHcC-----CHHHHHHHHHCCCCCcccc-CCCCc
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLG-----YTWAILLFSWSGLSLDFRD-KYGWT 536 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~--Ga~in~~D~~G~T~LH~Aa~~G-----~~~~v~~LL~~Ga~in~~D-~~G~T 536 (848)
.++.+.||.++...++. +++.|++ -++++..|.-|.||+++|+... ...+|..|...| |||++- ..|.|
T Consensus 266 sNGNTALHYsVSHaNF~--VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQT 342 (452)
T KOG0514|consen 266 SNGNTALHYAVSHANFD--VVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQT 342 (452)
T ss_pred CCCCeeeeeeecccchH--HHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcch
Confidence 34678899998888887 6666666 5689999999999999988653 456788777665 777764 46999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh-hhhhccccc
Q 003098 537 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ-ALVAQFNDM 604 (848)
Q Consensus 537 pLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~-Ga~~~l~~~ 604 (848)
+|++|+.+|+.++|+.||.+|||+|+ +|.+|.|+|++|+.+||++|+++|+.. +++..+.+.
T Consensus 343 ALMLAVSHGr~d~vk~LLacgAdVNi------QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~ 405 (452)
T KOG0514|consen 343 ALMLAVSHGRVDMVKALLACGADVNI------QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDV 405 (452)
T ss_pred hhhhhhhcCcHHHHHHHHHccCCCcc------ccCCccHHHhhhhhhChHHHHHHHhccCcccceeecC
Confidence 99999999999999999999999999 999999999999999999999999875 555555444
No 56
>PHA02730 ankyrin-like protein; Provisional
Probab=99.48 E-value=2.9e-13 Score=159.41 Aligned_cols=128 Identities=14% Similarity=0.043 Sum_probs=90.1
Q ss_pred ccccchHHHHHHcCCc---HHHHHHHHHc-CC--CCccccCCCCchHHH---HHHcC---------CHHHHHHHHHCCCC
Q 003098 465 PEAKDSFFELTLKSKL---KEWLLERVVE-GS--KTTEYDVHGQGVIHL---CAMLG---------YTWAILLFSWSGLS 526 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l---~e~Ll~~L~~-Ga--~in~~D~~G~T~LH~---Aa~~G---------~~~~v~~LL~~Ga~ 526 (848)
..+.+|||.++..++. .+ +++.|++ |+ ++|..|..|.||||. |+..+ ..+++++|+.+|++
T Consensus 376 ~~G~TpLH~Aa~~nnn~i~~e-IvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD 454 (672)
T PHA02730 376 TDNNYPLHDYFVNNNNIVDVN-VVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD 454 (672)
T ss_pred CCCCcHHHHHHHHcCCcchHH-HHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccc
Confidence 4566777777766641 23 5555554 65 577777788888873 32222 12457888888888
Q ss_pred CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHc--CChHHHHHHHhhhhhh
Q 003098 527 LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKK--GFDGLAAFLSEQALVA 599 (848)
Q Consensus 527 in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~-~G~TpL~lA~~~--G~~~iv~lLle~Ga~~ 599 (848)
+|.+|..|.||||+|+..++.+++++|+++||+++. +|. .|.||||+|+.. |+.+++++|+++|++.
T Consensus 455 INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~------~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 455 IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT------TSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 888888888888888888888888888888888877 554 478888888763 6778888888877664
No 57
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.48 E-value=9.8e-14 Score=138.93 Aligned_cols=107 Identities=21% Similarity=0.171 Sum_probs=95.1
Q ss_pred CCCCccccCCCCchHHHHHHcCCH----HHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHH---HHHHHHcCCCCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYT----WAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM---VVDLLSAGAKPNLV 563 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~----~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ei---v~~LL~~GA~in~~ 563 (848)
|++++..+..+.++||.||..|.. +++++|+..|++++.+|..|+||||+|+..|+.++ +++|++.|++++.
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~- 88 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA- 88 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC-
Confidence 567777888999999999999997 66678889999999999999999999999998654 8999999999998
Q ss_pred CCCCCCC-CCCCCHHHHHHHcCChHHHHHHHh-hhhhhcccc
Q 003098 564 TDPTSQN-PGGLNAADIASKKGFDGLAAFLSE-QALVAQFND 603 (848)
Q Consensus 564 td~~~~d-~~G~TpL~lA~~~G~~~iv~lLle-~Ga~~~l~~ 603 (848)
+| ..|.||||+|+..|+.+++++|++ .|++.+..+
T Consensus 89 -----~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 125 (166)
T PHA02743 89 -----RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN 125 (166)
T ss_pred -----CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC
Confidence 76 589999999999999999999995 798876654
No 58
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.47 E-value=2.4e-13 Score=120.99 Aligned_cols=86 Identities=30% Similarity=0.392 Sum_probs=75.1
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHH
Q 003098 471 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 549 (848)
Q Consensus 471 ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ei 549 (848)
|+.|+..++.. +++.|++ +.+++. |.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 1 L~~A~~~~~~~--~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLE--ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHH--HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHH--HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence 56777777766 5555555 777766 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCC
Q 003098 550 VVDLLSAGAKPNL 562 (848)
Q Consensus 550 v~~LL~~GA~in~ 562 (848)
+++|+++|++++.
T Consensus 75 ~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 75 VKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHHTTT-TTS
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999987
No 59
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.45 E-value=3.3e-13 Score=146.57 Aligned_cols=105 Identities=12% Similarity=-0.030 Sum_probs=92.2
Q ss_pred ccccCCCCch-HHHHHHcCCHHHHHHHHHCCCCCcccc----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 003098 495 TEYDVHGQGV-IHLCAMLGYTWAILLFSWSGLSLDFRD----KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQ 569 (848)
Q Consensus 495 n~~D~~G~T~-LH~Aa~~G~~~~v~~LL~~Ga~in~~D----~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~ 569 (848)
..+|..|.|+ ||.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..|+.+++++|+++||+++. +
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~------~ 99 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR------Y 99 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc------c
Confidence 3457777775 555666789999999999999999974 5899999999999999999999999999997 4
Q ss_pred -CCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 570 -NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 570 -d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
+..|.||||+|+..|+.+++++|++.|++.+..+..
T Consensus 100 ~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~ 136 (300)
T PHA02884 100 AEEAKITPLYISVLHGCLKCLEILLSYGADINIQTND 136 (300)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 457999999999999999999999999999877643
No 60
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.44 E-value=2.9e-13 Score=150.79 Aligned_cols=137 Identities=23% Similarity=0.275 Sum_probs=118.7
Q ss_pred CcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCC---------------
Q 003098 463 SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--------------- 526 (848)
Q Consensus 463 ~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~--------------- 526 (848)
...++.+.+|.+|+..+.. ++.+|++ |++||..|..|+||||.|+..||..++++|+..|++
T Consensus 69 ~n~DglTalhq~~id~~~e--~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~ 146 (527)
T KOG0505|consen 69 CNVDGLTALHQACIDDNLE--MVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLA 146 (527)
T ss_pred cCCccchhHHHHHhcccHH--HHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccc
Confidence 3456788999999988876 5666666 999999999999999999999999999999987554
Q ss_pred --------------------------------------------CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003098 527 --------------------------------------------LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 527 --------------------------------------------in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
.+.++..|-|+||.|+..|..++.++|+.+|.++++
T Consensus 147 e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~ 226 (527)
T KOG0505|consen 147 EDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI 226 (527)
T ss_pred cCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccc
Confidence 222344589999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccccc
Q 003098 563 VTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 563 ~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~ 607 (848)
+|.+|+||||.|+.-|+.+++++|+++|++.+.....-.
T Consensus 227 ------~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~ 265 (527)
T KOG0505|consen 227 ------KDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGE 265 (527)
T ss_pred ------ccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCC
Confidence 999999999999999999999999999999776655443
No 61
>PHA02792 ankyrin-like protein; Provisional
Probab=99.43 E-value=7.1e-13 Score=154.68 Aligned_cols=142 Identities=15% Similarity=0.094 Sum_probs=112.1
Q ss_pred HHHHHHHhCCCCCCcc--cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCC--CchHHHHHHcCCH---HHHHHHH
Q 003098 450 WAYLFKSVGDKRTSLP--EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG--QGVIHLCAMLGYT---WAILLFS 521 (848)
Q Consensus 450 ~~~li~~l~~~~~~~~--~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G--~T~LH~Aa~~G~~---~~v~~LL 521 (848)
..++++.+.+.+.+.. ...+.++.+|..++.. +++.|++ |++++..|..| .||||+|+..+.. .++++|+
T Consensus 320 ~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~e--IVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI 397 (631)
T PHA02792 320 YINVIKCMIDEGATLYRFKHINKYFQKFDNRDPK--VVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK 397 (631)
T ss_pred cHHHHHHHHHCCCccccCCcchHHHHHHHcCCHH--HHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH
Confidence 3455666655555432 3445678787777665 6777776 99999988775 6999987776654 3578899
Q ss_pred HCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH---c-------CChHHHHH
Q 003098 522 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK---K-------GFDGLAAF 591 (848)
Q Consensus 522 ~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~---~-------G~~~iv~l 591 (848)
.+|+++|.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.|||++|.. . .+.+++++
T Consensus 398 s~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~------kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~l 471 (631)
T PHA02792 398 PYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI------TTKYGSTCIGICVILAHACIPEIAELYIKILEI 471 (631)
T ss_pred hcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 88999999999976 2 23556778
Q ss_pred HHhhhhhh
Q 003098 592 LSEQALVA 599 (848)
Q Consensus 592 Lle~Ga~~ 599 (848)
|+++|.+.
T Consensus 472 LLs~~p~i 479 (631)
T PHA02792 472 ILSKLPTI 479 (631)
T ss_pred HHhcCCCh
Confidence 88777554
No 62
>PHA02730 ankyrin-like protein; Provisional
Probab=99.42 E-value=5.9e-13 Score=156.86 Aligned_cols=114 Identities=8% Similarity=-0.031 Sum_probs=99.3
Q ss_pred HHHHHHc-CCCCccccCCCCchHHHHHHcCC----HHHHHHHHHCCC--CCccccCCCCcHHHH---HHHcC--------
Q 003098 484 LLERVVE-GSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGL--SLDFRDKYGWTALHW---AAYYG-------- 545 (848)
Q Consensus 484 Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~----~~~v~~LL~~Ga--~in~~D~~G~TpLh~---Aa~~G-------- 545 (848)
+++.|++ |+++|.. ..|.||||+|+..++ .+++++|+++|+ ++|.+|..|.||||. |...+
T Consensus 361 IvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~ 439 (672)
T PHA02730 361 ILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYET 439 (672)
T ss_pred HHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccch
Confidence 6666666 9999985 799999999998875 899999999998 699999999999994 33332
Q ss_pred -CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 546 -REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 546 -~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
..+++++|+.+||+++. +|..|.||||+|+..++.+++++|+++||+.+..+.
T Consensus 440 ~~~~ivk~LIs~GADINa------kD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~ 493 (672)
T PHA02730 440 ILIDVFDILSKYMDDIDM------IDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSR 493 (672)
T ss_pred hHHHHHHHHHhcccchhc------cCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCC
Confidence 23569999999999999 899999999999999999999999999999877764
No 63
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.42 E-value=3.3e-13 Score=150.27 Aligned_cols=137 Identities=23% Similarity=0.330 Sum_probs=122.5
Q ss_pred hHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHH
Q 003098 470 SFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 549 (848)
Q Consensus 470 ~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ei 549 (848)
.++.+|..+...+ +..+|-.|+.+|..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||-|+.+||..+
T Consensus 43 ~~l~A~~~~d~~e-v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i 121 (527)
T KOG0505|consen 43 VFLEACSRGDLEE-VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI 121 (527)
T ss_pred HHHhccccccHHH-HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence 4778888888776 555555599999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCC-----------------------------------------------------CCCCCCCCCCCH
Q 003098 550 VVDLLSAGAKPNLVT-----------------------------------------------------DPTSQNPGGLNA 576 (848)
Q Consensus 550 v~~LL~~GA~in~~t-----------------------------------------------------d~~~~d~~G~Tp 576 (848)
+.+|+.+||++.+++ ++...+..|-|+
T Consensus 122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~ 201 (527)
T KOG0505|consen 122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATA 201 (527)
T ss_pred HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchH
Confidence 999999999986653 455677779999
Q ss_pred HHHHHHcCChHHHHHHHhhhhhhcccccccc
Q 003098 577 ADIASKKGFDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 577 L~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~ 607 (848)
||+|+.+|+.+++++|+++|.++.+++..-=
T Consensus 202 lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgW 232 (527)
T KOG0505|consen 202 LHVAAANGYTEVAALLLQAGYSVNIKDYDGW 232 (527)
T ss_pred HHHHHhhhHHHHHHHHHHhccCcccccccCC
Confidence 9999999999999999999999999886543
No 64
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=99.40 E-value=3.2e-12 Score=152.16 Aligned_cols=308 Identities=18% Similarity=0.150 Sum_probs=182.0
Q ss_pred CCCccccCCCCchHHHHHHcCCHHHHHHHHHC-CCCCccccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCC
Q 003098 492 SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQ 569 (848)
Q Consensus 492 a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~-Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~ 569 (848)
.........|+|.||+++..+|.|+++.+++- |...+..|..|.--+|+ |..++.+++-+|+. .|..+++ +
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i------~ 637 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDI------R 637 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccc------c
Confidence 34455667899999999999999999999975 76667777777777888 66677777776664 6888888 8
Q ss_pred CCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccccccccCcccccccccccccCccchhhhhhhhhhHHhhhHHHHH
Q 003098 570 NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGSLQTGSTITVDTQNLTEDEVYLKDTLSAYRTAAEAAA 649 (848)
Q Consensus 570 d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~~~is~~~~~~~~~~~~~~~~~~~~lsl~~sL~a~r~~~~Aai 649 (848)
|..|+||||+|+.+|+..++..|++.|++..+..-+..+...|...+ .+...++. +.++.|..-. +..
T Consensus 638 D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~----~la~s~g~-------~gia~~lse~-~L~ 705 (975)
T KOG0520|consen 638 DRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAA----DLARANGH-------KGIAGYLSEK-ALS 705 (975)
T ss_pred cCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchh----hhhhcccc-------cchHHHHhhh-HHH
Confidence 99999999999999999999999999988763222111111111111 11111110 0111110000 000
Q ss_pred HHHHHHhhhHH-------H-HHHHH-hh-------c-----CChHHHHHHHHHHHHHHHHHhhHHHHHHHH---------
Q 003098 650 RIQAAFREHSL-------K-VQTKA-IR-------F-----SSPEEEAQNIIAALKIQHAFRNFEVRKKMA--------- 699 (848)
Q Consensus 650 ~IQ~~~R~~~~-------R-kr~~~-~r-------~-----~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~--------- 699 (848)
..-..++...- - +-.+. .. . ..+-.....-.||..||.++|....++...
T Consensus 706 ~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~~~ 785 (975)
T KOG0520|consen 706 AHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDATKE 785 (975)
T ss_pred HHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhcch
Confidence 00000000000 0 00000 00 0 000112234467788888888776664322
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 003098 700 -------AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRV 772 (848)
Q Consensus 700 -------aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~r~~r~~~r~lr~~~~ 772 (848)
..+.++..++++..|. .-.++..||..+|+|+.|+.|...+..++.||+++|++ ..|+.|+.+-....
T Consensus 786 ~i~~~~~~~m~~~~a~~~~~~r~----~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~-q~r~dy~ki~wSv~ 860 (975)
T KOG0520|consen 786 QISEELAVSMKASSAFSMCDDRS----DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGY-QVRKDYRKITWSVG 860 (975)
T ss_pred hhhhhhhhhhhcccchhcCcccc----chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhch-hHhhhhheechhhh
Confidence 2233333333222222 12388999999999999999999999999999999999 77777766543221
Q ss_pred hhhccCCCCCCchhHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHHHHHHHHH
Q 003098 773 EVEAVSDPNHEGDAEEDFYR-------ASR-KQAEERVERSVVRVQSMFRSKKAQ--EEYRRMKLAHDQAK 833 (848)
Q Consensus 773 ~~~~~~~q~qa~~~~~~~~~-------~~R-~q~~~~~~~A~irIQs~~R~~~aR--r~~~~lk~~~~qak 833 (848)
+ .+..+-.|+ ..+ ++..+.+..|++.||..+|.++.- .-|++|.+++-..|
T Consensus 861 ~----------lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQ 921 (975)
T KOG0520|consen 861 V----------LEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQ 921 (975)
T ss_pred H----------HHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 011111222 111 123345556888899998877765 45666655554443
No 65
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=5.5e-13 Score=146.70 Aligned_cols=118 Identities=22% Similarity=0.311 Sum_probs=103.9
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHH
Q 003098 471 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 549 (848)
Q Consensus 471 ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ei 549 (848)
|+.+++.|.+. |+..++. -.|+...+..|-|+||-|+..||.+||++||..|++||..|.+||||||+||.+++..+
T Consensus 554 LLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 67788888877 6666665 55777789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH--HcCChHHHHHHHhh
Q 003098 550 VVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS--KKGFDGLAAFLSEQ 595 (848)
Q Consensus 550 v~~LL~~GA~in~~td~~~~d~~G~TpL~lA~--~~G~~~iv~lLle~ 595 (848)
++.|++.||.+-+.| -.++.||.+-+- ..|+.+|..||...
T Consensus 632 ckqLVe~GaavfAsT-----lSDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 632 CKQLVESGAAVFAST-----LSDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred HHHHHhccceEEeee-----cccccchhhhcchhhhhHHHHHHHHHHH
Confidence 999999999998754 378899998774 45999999999653
No 66
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.38 E-value=6.8e-12 Score=116.44 Aligned_cols=121 Identities=26% Similarity=0.344 Sum_probs=106.9
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.++..++.. +++.+.. |.+++..+..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+.
T Consensus 5 ~~g~t~l~~a~~~~~~~--~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 5 EDGRTPLHLAASNGHLE--VVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred cCCCCHHHHHHHcCcHH--HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 34678899988888764 4444444 88888899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 593 (848)
.++.+++++|+..|.+++. .|..|.||+++|...++.+++++|+
T Consensus 83 ~~~~~~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999999999988777 7889999999999999999998874
No 67
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.38 E-value=1.3e-12 Score=113.89 Aligned_cols=103 Identities=24% Similarity=0.299 Sum_probs=85.5
Q ss_pred HHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHH
Q 003098 471 FFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMV 550 (848)
Q Consensus 471 ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv 550 (848)
+..+..++.+.+ +...+.+|.++|..- .|++|||+||-.|...++++|+..|++|+.+|+.|.|||.-|+..||.+||
T Consensus 6 ~~W~vkNG~~De-Vk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 6 VAWNVKNGEIDE-VKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred HhhhhccCcHHH-HHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 344444555554 566666687777654 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003098 551 VDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 551 ~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
++||+.||+-.+ +.++|.+.+..+-
T Consensus 84 klLL~~GAdrt~------~~PdG~~~~eate 108 (117)
T KOG4214|consen 84 KLLLQNGADRTI------HAPDGTALIEATE 108 (117)
T ss_pred HHHHHcCcccce------eCCCchhHHhhcc
Confidence 999999999887 6688888877543
No 68
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.36 E-value=4.3e-12 Score=129.98 Aligned_cols=124 Identities=31% Similarity=0.390 Sum_probs=110.4
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCC-----HHHHHHHHHCCC---CCccccCCCCcH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY-----TWAILLFSWSGL---SLDFRDKYGWTA 537 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~-----~~~v~~LL~~Ga---~in~~D~~G~Tp 537 (848)
....+++.++..+.... +...+..|.+++..|..|.||||+|+..|+ .+++++|+..|+ ..+.+|..|+||
T Consensus 72 ~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tp 150 (235)
T COG0666 72 DGRLPLHSAASKGDDKI-VKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTP 150 (235)
T ss_pred cccCHHHHHHHcCcHHH-HHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCch
Confidence 35677888877776552 233344499999999999999999999999 999999999999 666679999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
||+|+..|+.+++++|++.|++++. .+..|.||+++|+..++..++..|+..+
T Consensus 151 l~~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 151 LHWAALNGDADIVELLLEAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred hHHHHHcCchHHHHHHHhcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence 9999999999999999999999998 7899999999999999999999999987
No 69
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.35 E-value=5.7e-12 Score=156.19 Aligned_cols=115 Identities=17% Similarity=0.114 Sum_probs=96.2
Q ss_pred CCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcC---------------------------
Q 003098 461 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG--------------------------- 512 (848)
Q Consensus 461 ~~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G--------------------------- 512 (848)
+.....+.++||.|+..++.. +++.|++ |+++|..|..|.||||+|+..|
T Consensus 552 n~~d~~G~TpLh~Aa~~g~~~--~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~A 629 (823)
T PLN03192 552 DIGDSKGRTPLHIAASKGYED--CVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTA 629 (823)
T ss_pred CCCCCCCCCHHHHHHHcChHH--HHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHH
Confidence 344556889999999988765 4555555 9999999999999998665555
Q ss_pred ----CHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC-CCHHHHHHHc
Q 003098 513 ----YTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKK 583 (848)
Q Consensus 513 ----~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G-~TpL~lA~~~ 583 (848)
+.++++.|+++|+++|.+|.+|+||||+|+..|+.+++++|+++||+++. .|..| .||++++...
T Consensus 630 a~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~------~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 630 AKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK------ANTDDDFSPTELRELL 699 (823)
T ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHH
Confidence 45566667889999999999999999999999999999999999999998 67777 9999887554
No 70
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.34 E-value=3.9e-12 Score=131.43 Aligned_cols=127 Identities=24% Similarity=0.257 Sum_probs=110.0
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHcCC-CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcc-ccCCCCcHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVEGS-KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF-RDKYGWTALHWA 541 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~Ga-~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~-~D~~G~TpLh~A 541 (848)
.+....+|+++..+++...+ .. |+++. ++|..|..|+++|..|+..|+.++|++||+.|+|||. ++..++||||+|
T Consensus 9 ld~~~~~Lle~i~Kndt~~a-~~-LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFA 86 (396)
T KOG1710|consen 9 LDAPKSPLLEAIDKNDTEAA-LA-LLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFA 86 (396)
T ss_pred ccchhhHHHHHHccCcHHHH-HH-HHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHH
Confidence 34567789999999887763 33 33433 5999999999999999999999999999999999986 466799999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhh
Q 003098 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~ 598 (848)
+..|+.++.++|++.|+.+.. .|.-|+|+..+|+.-||.+||..+-.+=-.
T Consensus 87 ALSGn~dvcrllldaGa~~~~------vNsvgrTAaqmAAFVG~H~CV~iINN~~t~ 137 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARMYL------VNSVGRTAAQMAAFVGHHECVAIINNHITI 137 (396)
T ss_pred HHcCCchHHHHHHhccCcccc------ccchhhhHHHHHHHhcchHHHHHHhccccH
Confidence 999999999999999999998 789999999999999999999988655433
No 71
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.32 E-value=3.2e-12 Score=146.78 Aligned_cols=127 Identities=20% Similarity=0.190 Sum_probs=116.7
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.+.+|+++++++.. +..+|++ .+-++.+|..|.+|||+||..|+.++++.|+..+..+|.....|.||||.|+..
T Consensus 48 ~gfTalhha~Lng~~~--is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQ--ISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH 125 (854)
T ss_pred cchhHHHHHHhcCchH--HHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh
Confidence 5778899999999887 6777666 778888999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 600 (848)
||.+++.+|+.+|+++-+ .|+.+.|+|++|++.|..++++.|+.......
T Consensus 126 gh~dvv~~Ll~~~adp~i------~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~ 175 (854)
T KOG0507|consen 126 GHLEVVFYLLKKNADPFI------RNNSKETVLDLASRFGRAEVVQMLLQKKFPVQ 175 (854)
T ss_pred cchHHHHHHHhcCCCccc------cCcccccHHHHHHHhhhhHHHHHHhhhccchh
Confidence 999999999999999988 88999999999999999999999999854433
No 72
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.31 E-value=4.3e-12 Score=122.63 Aligned_cols=95 Identities=21% Similarity=0.183 Sum_probs=87.0
Q ss_pred chHHHHHHcCCHHHHHHHHHCCCC-CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003098 503 GVIHLCAMLGYTWAILLFSWSGLS-LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~LL~~Ga~-in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
..+-+|+..+....|+.||+-.++ +|.+|.+|+||||-|+++||.+||..|+..||++++ +...|+||||-||
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a------~T~~GWTPLhSAc 138 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA------KTNEGWTPLHSAC 138 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc------ccccCccchhhhh
Confidence 456789999999999988876654 899999999999999999999999999999999999 5689999999999
Q ss_pred HcCChHHHHHHHhhhhhhcccc
Q 003098 582 KKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 582 ~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
.-++.+|+.+|+.+|++++...
T Consensus 139 kWnN~~va~~LLqhgaDVnA~t 160 (228)
T KOG0512|consen 139 KWNNFEVAGRLLQHGADVNAQT 160 (228)
T ss_pred cccchhHHHHHHhccCcccccc
Confidence 9999999999999999987654
No 73
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.28 E-value=8.2e-12 Score=153.45 Aligned_cols=132 Identities=19% Similarity=0.128 Sum_probs=108.3
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCcccc--------------CCCCchHHHHHHcCCHHHHHHHHHCCCCCcc
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD--------------VHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 529 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D--------------~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~ 529 (848)
..+.+|||.|+..++.. +++.|++ |++++..+ ..|.||||+|+..|+.+++++|++.|+++|.
T Consensus 126 ~~G~TpLhlAa~~~~~e--iVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 126 TPGITALHLAAHRQNYE--IVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT 203 (743)
T ss_pred CCCCcHHHHHHHhCCHH--HHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh
Confidence 45889999999999876 6666666 99998643 3599999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHcC---------CHHHHHHHHHcCCCCCCCC-CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhh
Q 003098 530 RDKYGWTALHWAAYYG---------REKMVVDLLSAGAKPNLVT-DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 530 ~D~~G~TpLh~Aa~~G---------~~eiv~~LL~~GA~in~~t-d~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~ 598 (848)
+|..|+||||+|+..+ ...+.++++..++...... ..+..|..|.||||+|+..|+.+++++|++.+..
T Consensus 204 ~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~ 282 (743)
T TIGR00870 204 ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK 282 (743)
T ss_pred HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHh
Confidence 9999999999999987 3456677777766652200 0023789999999999999999999999996543
No 74
>PHA02792 ankyrin-like protein; Provisional
Probab=99.28 E-value=2e-11 Score=142.70 Aligned_cols=128 Identities=14% Similarity=-0.009 Sum_probs=107.2
Q ss_pred CCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHH-cCCHHHHHHHHHCCCCCc----------
Q 003098 461 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAM-LGYTWAILLFSWSGLSLD---------- 528 (848)
Q Consensus 461 ~~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~-~G~~~~v~~LL~~Ga~in---------- 528 (848)
+....++.++++..|..+...| +++.|+. |+++|.++..|.||||+|+. .|+.+++++|+.+||+++
T Consensus 65 ~~~n~~~~~~~~~~~s~n~~lE-lvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~ 143 (631)
T PHA02792 65 DYKNINDFDIFEYLCSDNIDIE-LLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKII 143 (631)
T ss_pred CcCccCCccHHHHHHHhcccHH-HHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchh
Confidence 3333445667777777665556 5555555 99999999999999999965 699999999999998732
Q ss_pred --------------------------cccCCCCcHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 003098 529 --------------------------FRDKYGWTALHWAAYYG-------REKMVVDLLSAGAKPNLVTDPTSQNPGGLN 575 (848)
Q Consensus 529 --------------------------~~D~~G~TpLh~Aa~~G-------~~eiv~~LL~~GA~in~~td~~~~d~~G~T 575 (848)
..|..|.||||+|+..+ +.+++++|+++|++++. .|..|.|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~------~d~~g~t 217 (631)
T PHA02792 144 IEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY------YTYREHT 217 (631)
T ss_pred hhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc------cCCCCCh
Confidence 34566999999999999 89999999999999998 7889999
Q ss_pred HHHHHHHcC--ChHHHHHHHhh
Q 003098 576 AADIASKKG--FDGLAAFLSEQ 595 (848)
Q Consensus 576 pL~lA~~~G--~~~iv~lLle~ 595 (848)
|||+|+.+. ..+|+++|+..
T Consensus 218 ~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 218 TLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred HHHHHHHcccchHHHHHHHHhc
Confidence 999999999 78999999884
No 75
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.27 E-value=3.7e-11 Score=111.44 Aligned_cols=99 Identities=26% Similarity=0.313 Sum_probs=91.8
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 003098 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA 576 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~Tp 576 (848)
.|..|.||||+|+..|+.+++++|+..|.+++..|..|.||||+|+..++.++++.|+..|++++. .+..|.||
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~~ 76 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNTP 76 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCH
Confidence 467899999999999999999999999999999999999999999999999999999999998777 77899999
Q ss_pred HHHHHHcCChHHHHHHHhhhhhhcc
Q 003098 577 ADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 577 L~lA~~~G~~~iv~lLle~Ga~~~l 601 (848)
+|+|+..++.+++++|+.+|.+...
T Consensus 77 l~~a~~~~~~~~~~~L~~~~~~~~~ 101 (126)
T cd00204 77 LHLAARNGNLDVVKLLLKHGADVNA 101 (126)
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 9999999999999999999844433
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.27 E-value=1e-11 Score=108.33 Aligned_cols=94 Identities=20% Similarity=0.146 Sum_probs=86.2
Q ss_pred chHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 003098 503 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 582 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~ 582 (848)
--+.|+..+|..+-|+-.+..|.++|..- .|+||||+|+-+|..+++++|+..||+++. +|+.|-|||--|..
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHH
Confidence 34678999999999999999998888654 899999999999999999999999999998 99999999999999
Q ss_pred cCChHHHHHHHhhhhhhcccc
Q 003098 583 KGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 583 ~G~~~iv~lLle~Ga~~~l~~ 603 (848)
.||.+||++|+.+||+..++.
T Consensus 77 EGH~~cVklLL~~GAdrt~~~ 97 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGADRTIHA 97 (117)
T ss_pred HhhHHHHHHHHHcCcccceeC
Confidence 999999999999999975543
No 77
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.27 E-value=1.1e-11 Score=122.32 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=84.3
Q ss_pred ccccchHHHHHHcCCcH--HHHHHHHHc-CCCCcccc-CCCCchHHHHHHcCCHHHHHHHHH-CCCCCccccCCCCcHHH
Q 003098 465 PEAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALH 539 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~--e~Ll~~L~~-Ga~in~~D-~~G~T~LH~Aa~~G~~~~v~~LL~-~Ga~in~~D~~G~TpLh 539 (848)
..+.++||.++..++.. + +++.|+. |++++..| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||
T Consensus 53 ~~g~t~Lh~a~~~~~~~~~e-~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~ 131 (154)
T PHA02736 53 RHGKQCVHIVSNPDKADPQE-KLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYY 131 (154)
T ss_pred CCCCEEEEeecccCchhHHH-HHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHH
Confidence 34778999998887653 3 3444444 99999998 589999999999999999999997 59999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+|+..|+.+++++|+..|+++++
T Consensus 132 ~A~~~~~~~i~~~Ll~~ga~~~~ 154 (154)
T PHA02736 132 VACERHDAKMMNILRAKGAQCKV 154 (154)
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999998763
No 78
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=4.1e-12 Score=103.58 Aligned_cols=55 Identities=40% Similarity=0.643 Sum_probs=26.7
Q ss_pred HHHCC-CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003098 520 FSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 580 (848)
Q Consensus 520 LL~~G-a~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA 580 (848)
||+.| +++|.+|..|.||||+||.+|+.+++++|++.|+++++ +|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence 45666 77777777777777777777777777777777777777 777777777776
No 79
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.25 E-value=2.7e-11 Score=148.95 Aligned_cols=134 Identities=20% Similarity=0.124 Sum_probs=97.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC---HHHHHHHHHCCCC------Cc----cc
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY---TWAILLFSWSGLS------LD----FR 530 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~---~~~v~~LL~~Ga~------in----~~ 530 (848)
..+.++||.+|..++..+ +++.|.. |+ .+..|.||||.|+..++ ..++..++..+.+ ++ ..
T Consensus 50 ~~G~t~Lh~~A~~~~~~e-iv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~ 124 (743)
T TIGR00870 50 RLGRSALFVAAIENENLE-LTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSE 124 (743)
T ss_pred ccchhHHHHHHHhcChHH-HHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccc
Confidence 457788886777776655 6666666 54 67789999999987322 2333444444322 11 12
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------CCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 531 DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTD--------PTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 531 D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td--------~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
+..|.||||+||.+|+.++|++|+++||+++.... .......|.||||+|+..|+.+++++|+++|++.+..
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 34699999999999999999999999999986321 0012246999999999999999999999999877655
Q ss_pred c
Q 003098 603 D 603 (848)
Q Consensus 603 ~ 603 (848)
+
T Consensus 205 d 205 (743)
T TIGR00870 205 D 205 (743)
T ss_pred h
Confidence 4
No 80
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.22 E-value=2e-11 Score=98.61 Aligned_cols=54 Identities=31% Similarity=0.374 Sum_probs=33.4
Q ss_pred CCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHH
Q 003098 501 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLL 554 (848)
Q Consensus 501 G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL 554 (848)
|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 566777777777777777777667777777777777777777777777776664
No 81
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.21 E-value=4.6e-11 Score=144.35 Aligned_cols=86 Identities=28% Similarity=0.360 Sum_probs=50.2
Q ss_pred hHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHc
Q 003098 504 VIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKK 583 (848)
Q Consensus 504 ~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~ 583 (848)
.||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.+++++|+++|++++. +|..|.||||+|+..
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~~ 158 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEEN 158 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHC
Confidence 35555555555555555555555555555555555555555555555555555555555 555555555555555
Q ss_pred CChHHHHHHHhh
Q 003098 584 GFDGLAAFLSEQ 595 (848)
Q Consensus 584 G~~~iv~lLle~ 595 (848)
|+.+++++|+++
T Consensus 159 g~~~iv~~Ll~~ 170 (664)
T PTZ00322 159 GFREVVQLLSRH 170 (664)
T ss_pred CcHHHHHHHHhC
Confidence 555555555555
No 82
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.16 E-value=1.3e-10 Score=135.53 Aligned_cols=122 Identities=19% Similarity=0.205 Sum_probs=107.4
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccc--------cC---------------CCCchHHHHHHcCCHHHHHHHHH
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEY--------DV---------------HGQGVIHLCAMLGYTWAILLFSW 522 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~--------D~---------------~G~T~LH~Aa~~G~~~~v~~LL~ 522 (848)
|.++||.|..+.+.. ++..|++ |+|++.+ +. .|..||-+||..+..+++++|++
T Consensus 184 GqSaLHiAIv~~~~~--~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAE--LVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred CcchHHHHHHhccHH--HHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 667888887777665 6666666 9999762 11 37789999999999999999999
Q ss_pred CCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 523 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAK--PNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 523 ~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~--in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
+|+|+|.+|.+|+|.||..+.+-..++.++++++|++ ..+ +|..|.|||.+|+..|..++.+.+++..
T Consensus 262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v------~N~qgLTPLtLAaklGk~emf~~ile~~ 331 (782)
T KOG3676|consen 262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV------RNNQGLTPLTLAAKLGKKEMFQHILERR 331 (782)
T ss_pred cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc------cccCCCChHHHHHHhhhHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999 555 8999999999999999999999999983
No 83
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.16 E-value=1.1e-10 Score=141.11 Aligned_cols=104 Identities=19% Similarity=0.154 Sum_probs=91.1
Q ss_pred hHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003098 470 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
.|+.++..++.. .++.|+. |+++|..|..|.||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.+
T Consensus 85 ~L~~aa~~G~~~--~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 85 ELCQLAASGDAV--GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHcCCHH--HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 478888888876 4555555 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-------CCCCCCCCCCCCCCCCCCCHHHHHH
Q 003098 549 MVVDLLSA-------GAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 549 iv~~LL~~-------GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
++++|+.+ |++++. .+..|.+|+..+.
T Consensus 163 iv~~Ll~~~~~~~~~ga~~~~------~~~~g~~~~~~~~ 196 (664)
T PTZ00322 163 VVQLLSRHSQCHFELGANAKP------DSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHhCCCcccccCCCCCc------cccCCCCccchhh
Confidence 99999998 666555 7777877776554
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.15 E-value=3.3e-11 Score=98.24 Aligned_cols=51 Identities=29% Similarity=0.398 Sum_probs=33.6
Q ss_pred C-CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHH
Q 003098 491 G-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 491 G-a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
| .+++..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|
T Consensus 5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 6 88999999999999999999999999999999999999999999999997
No 85
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.15 E-value=2.6e-11 Score=139.38 Aligned_cols=109 Identities=20% Similarity=0.163 Sum_probs=101.7
Q ss_pred CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 003098 493 KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 572 (848)
Q Consensus 493 ~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~ 572 (848)
.+|..|..|.|+||.||.+|+..++++|+++.+-++..|..|.+|||+|++.|+.+++++|+..+..+|+ .+..
T Consensus 41 s~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na------~~~e 114 (854)
T KOG0507|consen 41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNA------VNIE 114 (854)
T ss_pred cccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCc------cccc
Confidence 5677889999999999999999999999999999999999999999999999999999999999988887 7789
Q ss_pred CCCHHHHHHHcCChHHHHHHHhhhhhhcccccccc
Q 003098 573 GLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 573 G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~ 607 (848)
|.||||+|+.+||.+++.+|+.+|+++-+.+-+..
T Consensus 115 ~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~ 149 (854)
T KOG0507|consen 115 NETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKE 149 (854)
T ss_pred CcCccchhhhhcchHHHHHHHhcCCCccccCcccc
Confidence 99999999999999999999999999987775443
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.14 E-value=8.2e-11 Score=95.01 Aligned_cols=54 Identities=39% Similarity=0.510 Sum_probs=46.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003098 534 GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 534 G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 593 (848)
|+||||+||..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINA------QDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence 78999999999999999999999999998 7899999999999999999999986
No 87
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.07 E-value=1.3e-09 Score=111.52 Aligned_cols=106 Identities=26% Similarity=0.276 Sum_probs=96.5
Q ss_pred CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CCCCC
Q 003098 492 SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR-----EKMVVDLLSAGA---KPNLV 563 (848)
Q Consensus 492 a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~-----~eiv~~LL~~GA---~in~~ 563 (848)
......+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+ .++++.|++.|+ ..+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~- 142 (235)
T COG0666 64 RHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL- 142 (235)
T ss_pred cccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc-
Confidence 3444567779999999999999999999999999999999999999999999999 999999999999 3343
Q ss_pred CCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 564 TDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 564 td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
+|..|.||||+|+..|+.+++++|++.|++....+
T Consensus 143 -----~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~ 177 (235)
T COG0666 143 -----RDEDGNTPLHWAALNGDADIVELLLEAGADPNSRN 177 (235)
T ss_pred -----cCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccc
Confidence 79999999999999999999999999998887763
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=2.9e-10 Score=125.58 Aligned_cols=91 Identities=20% Similarity=0.104 Sum_probs=84.7
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 003098 505 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 584 (848)
Q Consensus 505 LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G 584 (848)
|.-|+..|-.++|+-.+..--|+...+..|.||||-|++.||.+||++||+.|+|+|+ .|.+|+||||+|+.++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASCN 627 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhcC
Confidence 3348888999999999988889999999999999999999999999999999999999 8999999999999999
Q ss_pred ChHHHHHHHhhhhhhcc
Q 003098 585 FDGLAAFLSEQALVAQF 601 (848)
Q Consensus 585 ~~~iv~lLle~Ga~~~l 601 (848)
+.-+++.|++.|+.+-.
T Consensus 628 nv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAVFA 644 (752)
T ss_pred chHHHHHHHhccceEEe
Confidence 99999999999987643
No 89
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.03 E-value=6.4e-10 Score=129.81 Aligned_cols=131 Identities=19% Similarity=0.217 Sum_probs=104.7
Q ss_pred cccchHHHHHHcC--CcHHHHHHHHHc--CCCCcc----ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccc-------
Q 003098 466 EAKDSFFELTLKS--KLKEWLLERVVE--GSKTTE----YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------- 530 (848)
Q Consensus 466 ~~~~~ll~aa~~~--~l~e~Ll~~L~~--Ga~in~----~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~------- 530 (848)
.|+|.||.+.++. ...+ +...|++ ..-+|. -...|+||||+|..+.+.++|++|++.||||+++
T Consensus 142 ~GET~Lh~~lL~~~~~~n~-la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~ 220 (782)
T KOG3676|consen 142 TGETLLHKALLNLSDGHNE-LARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFC 220 (782)
T ss_pred hhhhHHHHHHhcCchhHHH-HHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccC
Confidence 4666777766643 2223 4444443 222232 2346999999999999999999999999999874
Q ss_pred --c--------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHh
Q 003098 531 --D--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 594 (848)
Q Consensus 531 --D--------------~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle 594 (848)
| ..|..||-+||..++.+|+++|+++|||+++ +|.+|+|.||..+.+-..++-.++++
T Consensus 221 ~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L~ 294 (782)
T KOG3676|consen 221 PDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA------QDSNGNTVLHMLVIHFVTEMYDLALE 294 (782)
T ss_pred cccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc------cccCCChHHHHHHHHHHHHHHHHHHh
Confidence 1 2478999999999999999999999999999 99999999999999988899999999
Q ss_pred hhhh--hcccc
Q 003098 595 QALV--AQFND 603 (848)
Q Consensus 595 ~Ga~--~~l~~ 603 (848)
+|++ .++.|
T Consensus 295 ~ga~~l~~v~N 305 (782)
T KOG3676|consen 295 LGANALEHVRN 305 (782)
T ss_pred cCCCccccccc
Confidence 9999 55544
No 90
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.00 E-value=1e-09 Score=96.45 Aligned_cols=84 Identities=23% Similarity=0.278 Sum_probs=74.0
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeeccee-eeeCCeeeeecCCCCCceeEEEEEeCCCCC
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAE-FVQAGVYRCFLPPHSPGLFLLYMSLDGHKP 374 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~-~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~ 374 (848)
+.|++|+|.|++..||++|+|.|.+|.. ....+.|+||+...+.. .+++..|.|.+|++.+|.+++.|...+...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~ 76 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQI 76 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCe
Confidence 4699999999999999999999999922 25589999999999988 999999999999999999999999998667
Q ss_pred ccccccccc
Q 003098 375 ISQVLNFEY 383 (848)
Q Consensus 375 ~Sev~~Fey 383 (848)
+++...|+|
T Consensus 77 ~~~~~~F~Y 85 (85)
T PF01833_consen 77 YSNNTSFTY 85 (85)
T ss_dssp EEEEEEEEE
T ss_pred EECCeeeEC
Confidence 888888887
No 91
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.98 E-value=9.3e-10 Score=129.60 Aligned_cols=253 Identities=16% Similarity=0.167 Sum_probs=167.4
Q ss_pred CcceEEEcCCeecceeeeeCCeeeeecCCC--CCceeEEEEEeCCCCCcccccccccCC-CCCccCCCCccccchhhHHH
Q 003098 329 KSNMFCVCGEVRVPAEFVQAGVYRCFLPPH--SPGLFLLYMSLDGHKPISQVLNFEYRS-PQLHAPVASSEDKSKWEEFQ 405 (848)
Q Consensus 329 ~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph--~~G~Vpl~v~~~~~~~~Sev~~Fey~~-~~~~~~~~~~~~~~~~~~~~ 405 (848)
..-..|.-|+-+..--++..|.-. .| ..|+||+.++...++ +.++..-.+. -.++...+.+.+ +.+.
T Consensus 760 ~LT~acaggh~e~vellv~rgani----ehrdkkgf~plImaatagh--~tvV~~llk~ha~veaQsdrtkd----t~lS 829 (2131)
T KOG4369|consen 760 NLTSACAGGHREEVELLVVRGANI----EHRDKKGFVPLIMAATAGH--ITVVQDLLKAHADVEAQSDRTKD----TMLS 829 (2131)
T ss_pred cccccccCccHHHHHHHHHhcccc----cccccccchhhhhhcccCc--hHHHHHHHhhhhhhhhhcccccC----ceEE
Confidence 334678888877665566666521 23 589999999987654 2222221111 011111111100 0011
Q ss_pred H-----HHHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHHHHHHHhCCCC--CC----cccccchHHHH
Q 003098 406 V-----QMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKR--TS----LPEAKDSFFEL 474 (848)
Q Consensus 406 l-----~~Rl~~LL~~~~~~l~il~sk~~~~~l~e~~~~~~~i~~~~~~~~~li~~l~~~~--~~----~~~~~~~ll~a 474 (848)
| -.|.++||...... |. -.+..++..+-....+++..+++.+...+ +. ..-+-.||+.+
T Consensus 830 lacsggr~~vvelLl~~gan------ke----hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmla 899 (2131)
T KOG4369|consen 830 LACSGGRTRVVELLLNAGAN------KE----HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLA 899 (2131)
T ss_pred EecCCCcchHHHHHHHhhcc------cc----ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhh
Confidence 1 23666676443222 11 11222222333334678888888875544 22 33456789999
Q ss_pred HHcCCcHHHHHHHHHcCCCCcc-ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHH
Q 003098 475 TLKSKLKEWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDL 553 (848)
Q Consensus 475 a~~~~l~e~Ll~~L~~Ga~in~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~L 553 (848)
.+.++-.. .+.+|..|.|+|. ...+-+|+|-+|+..|+.++|.+||.+.+++..+-+.|.|||+-++..|.+++-++|
T Consensus 900 tmngh~~a-t~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~l 978 (2131)
T KOG4369|consen 900 TMNGHQAA-TLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLL 978 (2131)
T ss_pred hhccccHH-HHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhh
Confidence 99998764 4444445999998 455678999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003098 554 LSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 554 L~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l 606 (848)
|..|||+|+-. .-..-.|+|-+++..||...+..|+...+.+.+++..-
T Consensus 979 i~~gad~nasP----vp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG 1027 (2131)
T KOG4369|consen 979 IAAGADTNASP----VPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKG 1027 (2131)
T ss_pred hhcccccccCC----CCCcCCccceeecCCCchhhhHHhhCCccceecccCCC
Confidence 99999999843 22344577777788888888888887777777766543
No 92
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.92 E-value=5.8e-09 Score=92.58 Aligned_cols=83 Identities=25% Similarity=0.348 Sum_probs=69.5
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCC-CceeEEEEEeCCCCC
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHKP 374 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~-~G~Vpl~v~~~~~~~ 374 (848)
+.|++|+|..||..|||+|+|.|.+|.. .....|+||+.+.....+.+..|.|.+|++. .|.++|.|..++. .
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~-~ 74 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGA-R 74 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCc-c
Confidence 3699999999999999999999999965 3458999999876666678889999999985 7899999998876 3
Q ss_pred cccccccccC
Q 003098 375 ISQVLNFEYR 384 (848)
Q Consensus 375 ~Sev~~Fey~ 384 (848)
.+....|+|.
T Consensus 75 ~~~~~~F~Y~ 84 (85)
T cd01179 75 RLAPLVFTYT 84 (85)
T ss_pred cCCCccEEEe
Confidence 4445778885
No 93
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.83 E-value=1.5e-08 Score=90.10 Aligned_cols=84 Identities=24% Similarity=0.247 Sum_probs=69.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEc-CCeecceeeeeCCeeeeecCCCCC---ceeEEEEEeCC
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-GEVRVPAEFVQAGVYRCFLPPHSP---GLFLLYMSLDG 371 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~F-G~~~vpa~~~~~gvl~C~~Pph~~---G~Vpl~v~~~~ 371 (848)
+.|++|+|.+++..||++|+|.|.+|.. ...+.|+| |+.......+.+..|.|.+|+... |.|.|.|...+
T Consensus 1 P~I~~i~P~~g~~~GGt~itI~G~~f~~-----~~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~ 75 (89)
T cd00102 1 PVITSISPSSGPVSGGTEVTITGSNFGS-----GSNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGN 75 (89)
T ss_pred CEEeEEECCcCCCCCCeEEEEEEECCCC-----CCcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCC
Confidence 3699999999999999999999999965 22699999 888777777789999999999854 78888887655
Q ss_pred CCCcccccccccC
Q 003098 372 HKPISQVLNFEYR 384 (848)
Q Consensus 372 ~~~~Sev~~Fey~ 384 (848)
....+....|+|.
T Consensus 76 ~~~~~~~~~F~Y~ 88 (89)
T cd00102 76 GGITSSPLTFTYV 88 (89)
T ss_pred CcccCCCccEEee
Confidence 3356777888884
No 94
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.82 E-value=2e-09 Score=126.94 Aligned_cols=130 Identities=19% Similarity=0.175 Sum_probs=112.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcc-ccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF-RDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~-~D~~G~TpLh~Aa 542 (848)
.+-+++|-.+|..++-+ ++++|+. |+++..+|+.|.+||.+|+-.||..+|+.|+.+.++++. .|..+.|+|.+||
T Consensus 755 ~n~~t~LT~acaggh~e--~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac 832 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHRE--EVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC 832 (2131)
T ss_pred ccccccccccccCccHH--HHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence 34566777777777655 4555555 999999999999999999999999999999999999986 4778999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
..|+.++|++||..|++-.. +|-..+|||.+|..-|+.+|+.+|+.+|+..+-+
T Consensus 833 sggr~~vvelLl~~gankeh------rnvsDytPlsla~Sggy~~iI~~llS~GseInSr 886 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANKEH------RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSR 886 (2131)
T ss_pred CCCcchHHHHHHHhhccccc------cchhhcCchhhhcCcchHHHHHHHhhcccccccc
Confidence 99999999999999999877 7888999999999999999999999999776543
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.82 E-value=1.9e-08 Score=110.89 Aligned_cols=97 Identities=27% Similarity=0.222 Sum_probs=89.1
Q ss_pred CccccCCCCch------HHHHHHcCCHHHHHHHHHCCCCCccccC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 003098 494 TTEYDVHGQGV------IHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDP 566 (848)
Q Consensus 494 in~~D~~G~T~------LH~Aa~~G~~~~v~~LL~~Ga~in~~D~-~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~ 566 (848)
...+|.+|.|. ||..+..|+.+..--||..|+++|+.+. .|.||||.|+..|...-+++|+-+|||++.
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a---- 195 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA---- 195 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC----
Confidence 45677777776 8999999999999999999999999876 599999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 567 TSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 567 ~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
.|.+|.||+++|...||.++++.|++.-
T Consensus 196 --~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 196 --QDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred --CCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 8999999999999999999999998865
No 96
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.76 E-value=2e-08 Score=104.30 Aligned_cols=98 Identities=21% Similarity=0.123 Sum_probs=88.3
Q ss_pred CchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003098 502 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 581 (848)
Q Consensus 502 ~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~ 581 (848)
..+|.-+...|..+....||+.--++|.+|.+|.|+|..|+..|+.++|++||+.|||+|.. ++..++||||+|+
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~-----qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK-----QHGTLYTPLMFAA 87 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc-----cccccccHHHHHH
Confidence 56788888888888888888776669999999999999999999999999999999999984 6788999999999
Q ss_pred HcCChHHHHHHHhhhhhhccccc
Q 003098 582 KKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 582 ~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
..|+.++.++|++.|+...+-|.
T Consensus 88 LSGn~dvcrllldaGa~~~~vNs 110 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYLVNS 110 (396)
T ss_pred HcCCchHHHHHHhccCccccccc
Confidence 99999999999999998876553
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.66 E-value=1.3e-08 Score=117.82 Aligned_cols=83 Identities=25% Similarity=0.363 Sum_probs=78.9
Q ss_pred CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 003098 494 TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 572 (848)
Q Consensus 494 in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~-~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~ 572 (848)
.|.+|..|+|+||+|+..|...++++||.+|++++.+|. .||||||-|..+|+.+|+-+||.+|+...+ +|..
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence 677899999999999999999999999999999999997 599999999999999999999999999988 8999
Q ss_pred CCCHHHHHHH
Q 003098 573 GLNAADIASK 582 (848)
Q Consensus 573 G~TpL~lA~~ 582 (848)
|..||++-+.
T Consensus 119 glsplq~~~r 128 (1267)
T KOG0783|consen 119 GLSPLQFLSR 128 (1267)
T ss_pred CCCHHHHHhh
Confidence 9999998776
No 98
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.63 E-value=1e-07 Score=106.27 Aligned_cols=121 Identities=26% Similarity=0.275 Sum_probs=108.7
Q ss_pred chHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCC--CccccCCCCcHHHHHHHcCC
Q 003098 469 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--LDFRDKYGWTALHWAAYYGR 546 (848)
Q Consensus 469 ~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~--in~~D~~G~TpLh~Aa~~G~ 546 (848)
..++.+++.+++.+ +.+....|.++-.++.+..|.||+|+..|+-++|++||.+|.. +|..|..|.|+||-|+..++
T Consensus 868 eeil~av~~~D~~k-lqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMK-LQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHHHhccHHH-HHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 34788888888776 5565666888888999999999999999999999999999865 68889999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 547 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 547 ~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
..+..+|++.||.... .|..|.||-.-|...|..+++.||....
T Consensus 947 r~vc~~lvdagasl~k------td~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRK------TDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred hHHHHHHHhcchhhee------cccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 9999999999999887 7899999999999999999999997754
No 99
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.57 E-value=5.9e-08 Score=106.67 Aligned_cols=93 Identities=25% Similarity=0.223 Sum_probs=85.4
Q ss_pred cCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCH
Q 003098 498 DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNA 576 (848)
Q Consensus 498 D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~Tp 576 (848)
+.++...+.+||..|....++-+.-.|.|++.+|.+.+|+||.||..|+++++++|++ .+.+++. +|..|+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~------kDRw~rtP 576 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDP------KDRWGRTP 576 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCCh------hhccCCCc
Confidence 4456788999999999999999988999999999999999999999999999999997 5677766 99999999
Q ss_pred HHHHHHcCChHHHHHHHhhh
Q 003098 577 ADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 577 L~lA~~~G~~~iv~lLle~G 596 (848)
|+-|...+|.+++++|.+.-
T Consensus 577 lDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred chHhHhcCcHHHHHHHHHHh
Confidence 99999999999999998854
No 100
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.50 E-value=6.1e-07 Score=80.28 Aligned_cols=85 Identities=21% Similarity=0.235 Sum_probs=64.3
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCC-CceeEEEEEeCCCC-
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHK- 373 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~-~G~Vpl~v~~~~~~- 373 (848)
+.|+.|+|..|+..||+.|+|.|.+|... .....|.||+.+.....+.+..+.|.+|+.. +|..++.|.-.+..
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANV 76 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCccc
Confidence 46999999999999999999999998662 2369999999876666678899999999985 32455555554442
Q ss_pred --CcccccccccC
Q 003098 374 --PISQVLNFEYR 384 (848)
Q Consensus 374 --~~Sev~~Fey~ 384 (848)
..+....|+|.
T Consensus 77 ~~~~~~~~~F~Y~ 89 (90)
T cd00603 77 SARVLSNTTFTYV 89 (90)
T ss_pred cccccCCcceEEe
Confidence 24555667663
No 101
>PF13606 Ank_3: Ankyrin repeat
Probab=98.47 E-value=1.8e-07 Score=66.06 Aligned_cols=30 Identities=43% Similarity=0.442 Sum_probs=24.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003098 533 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 533 ~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+|+||||+||..|+.++|++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 478888888888888888888888888763
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.47 E-value=1.2e-06 Score=98.64 Aligned_cols=96 Identities=24% Similarity=0.329 Sum_probs=77.8
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCC--CCcc--ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVEGS--KTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~Ga--~in~--~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
.....|+.|....++.. ++-+|..|. .+|. -+.+|+|+||+||..|+..+.++|+++|+|+-.+|..|.|||.||
T Consensus 623 ~lgqqLl~A~~~~Dl~t-~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~ya 701 (749)
T KOG0705|consen 623 PLGQQLLRAVAAEDLQT-AILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYA 701 (749)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhH
Confidence 34556777777777653 333344443 3443 567789999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCC
Q 003098 542 AYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~ 562 (848)
-..|..+|+++|+.+|+...-
T Consensus 702 r~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 702 RQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hhcccHHHHHHHHHcCCCccc
Confidence 999999999999999987543
No 103
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.44 E-value=8.9e-07 Score=80.14 Aligned_cols=87 Identities=13% Similarity=0.023 Sum_probs=65.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecce---eeeeCCeeeeecCCCCC--ceeEEEEEeC
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPA---EFVQAGVYRCFLPPHSP--GLFLLYMSLD 370 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa---~~~~~gvl~C~~Pph~~--G~Vpl~v~~~ 370 (848)
+.|++|+|..||..|||.|+|.|.+|....+ .....+++|+.+-.- .......|+|.+||+.+ +..+|.|...
T Consensus 1 P~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~ 78 (94)
T cd01180 1 PVITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVG 78 (94)
T ss_pred CeeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEEC
Confidence 3699999999999999999999999965211 135789999974221 24566789999999853 7888888886
Q ss_pred CCC-CcccccccccC
Q 003098 371 GHK-PISQVLNFEYR 384 (848)
Q Consensus 371 ~~~-~~Sev~~Fey~ 384 (848)
+.. .++....|+|.
T Consensus 79 ~~~~~~~~~~~F~Y~ 93 (94)
T cd01180 79 HGSFRTESSEGFSFV 93 (94)
T ss_pred CceecccccCceEEe
Confidence 653 45556778875
No 104
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.41 E-value=8.6e-07 Score=79.27 Aligned_cols=83 Identities=25% Similarity=0.302 Sum_probs=63.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeee--eCCeeeeecCCCC--CceeEE-EEEeC
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFV--QAGVYRCFLPPHS--PGLFLL-YMSLD 370 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~--~~gvl~C~~Pph~--~G~Vpl-~v~~~ 370 (848)
+.|+.|+|.+|+..||++|+|+|.+|.. .....|.|+...+++.+. .+..|.|.+|+.. ++.+++ .|...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 5799999999999999999999999976 556778887756666665 5788999999874 677777 66665
Q ss_pred CCCCccccccccc
Q 003098 371 GHKPISQVLNFEY 383 (848)
Q Consensus 371 ~~~~~Sev~~Fey 383 (848)
+...-++...|+|
T Consensus 77 ~~~~~~~~~~f~y 89 (90)
T smart00429 77 NGGVPSSPQPFTY 89 (90)
T ss_pred CCCccCcccCeEE
Confidence 5443333345655
No 105
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.32 E-value=2.8e-06 Score=102.31 Aligned_cols=85 Identities=27% Similarity=0.309 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 644 AAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLNM 720 (848)
Q Consensus 644 ~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~---~~~aA~~IQa~~Rg~~~Rk~~~~~ 720 (848)
...+++.||+.+|+|..|+.|..+| .+++.||+.+||+.+|+ ...||+.||+.+|++..|+.|...
T Consensus 672 l~~~~~~iq~~~r~~~~r~~f~~~r-----------~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~ 740 (862)
T KOG0160|consen 672 LSAAKVLIQRQIRGYLARKKFLQLR-----------SAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRAL 740 (862)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4557777999999999999998888 99999999999999998 777999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHH
Q 003098 721 RRQAIKIQAAFRGFQVRKQ 739 (848)
Q Consensus 721 r~aai~IQa~~Rg~~~Rk~ 739 (848)
+.+++.||+.+|++..|.+
T Consensus 741 ~~~~~~~qs~~r~~~~r~e 759 (862)
T KOG0160|consen 741 IPASITIQSGVRAMLARNE 759 (862)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 9999999999999999883
No 106
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.29 E-value=1e-06 Score=63.58 Aligned_cols=30 Identities=43% Similarity=0.474 Sum_probs=24.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003098 533 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 533 ~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 477888888888888888888888888777
No 107
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.23 E-value=3.5e-06 Score=93.38 Aligned_cols=85 Identities=18% Similarity=0.251 Sum_probs=71.5
Q ss_pred hHHHHHHcCCcHHHHHHHHHcCCCCcccc-CCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003098 470 SFFELTLKSKLKEWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D-~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
.||..+..++++. .+.+|..|+++|..+ +.|.||||.||..|...-+++|+-+|+|++..|.+|.||+.+|-..||-+
T Consensus 136 QLhasvRt~nlet-~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 136 QLHSSVRTGNLET-CLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHhhcccHHH-HHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence 4555555555553 555556699999965 56999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHH
Q 003098 549 MVVDLLS 555 (848)
Q Consensus 549 iv~~LL~ 555 (848)
+++-|++
T Consensus 215 laeRl~e 221 (669)
T KOG0818|consen 215 LAERLVE 221 (669)
T ss_pred HHHHHHH
Confidence 8877764
No 108
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.23 E-value=2.6e-06 Score=95.78 Aligned_cols=87 Identities=20% Similarity=0.309 Sum_probs=64.5
Q ss_pred hHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHH
Q 003098 470 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 548 (848)
Q Consensus 470 ~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~e 548 (848)
+++.++........-.+++.+ +..++..|..|.||||+|+.+|+...++.|+..|+++..++..||+|||-|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 456665555544322222222 5567778888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHc
Q 003098 549 MVVDLLSA 556 (848)
Q Consensus 549 iv~~LL~~ 556 (848)
++..++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 87776653
No 109
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=98.20 E-value=5.5e-05 Score=94.13 Aligned_cols=153 Identities=22% Similarity=0.188 Sum_probs=104.4
Q ss_pred hhhhHHh--hhHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHH
Q 003098 636 DTLSAYR--TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRS 710 (848)
Q Consensus 636 ~sL~a~r--~~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~---~~~aA~~IQa~~Rg 710 (848)
..|+..| .....+++||+.|||+..|+|+.+.. +...++..+|..+|-+..+. ..++++.||..|+.
T Consensus 734 ~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~--------k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 805 (1463)
T COG5022 734 AALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQAL--------KRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSL 805 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHH
Confidence 3444333 35678999999999999999996533 44455555555554432222 13488889999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCchhH
Q 003098 711 WKVRKEFLNMRRQAIKIQ-AAFRGFQVRKQ--YGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAE 787 (848)
Q Consensus 711 ~~~Rk~~~~~r~aai~IQ-a~~Rg~~~Rk~--y~~~~~aa~~IQ~~~R~~r~~r~~~r~lr~~~~~~~~~~~q~qa~~~~ 787 (848)
...|+++......++.+| ..+|....+.. -.....+...+|++||.. .+++.
T Consensus 806 ~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~-~~~kr------------------------ 860 (1463)
T COG5022 806 LGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSL-KAKKR------------------------ 860 (1463)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh-hhhHH------------------------
Confidence 988988888888888888 66666666663 344455788888887666 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 003098 788 EDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQA 832 (848)
Q Consensus 788 ~~~~~~~R~q~~~~~~~A~irIQs~~R~~~aRr~~~~lk~~~~qa 832 (848)
+..+.+.++.+|+.+|...|++++..++.+..+.
T Consensus 861 -----------~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~ 894 (1463)
T COG5022 861 -----------FSLLKKETIYLQSAQRVELAERQLQELKIDVKSI 894 (1463)
T ss_pred -----------HHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 2234466677888888888888888888776643
No 110
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.19 E-value=3.2e-06 Score=95.02 Aligned_cols=87 Identities=24% Similarity=0.254 Sum_probs=74.1
Q ss_pred chHHHHHHcCCHHHHHH-H-HHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003098 503 GVIHLCAMLGYTWAILL-F-SWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 580 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~-L-L~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA 580 (848)
-|||+++.....+-+.. | .+.+..|+.+|..|.||||+|+..|+.+.++.|+.+||++.+ +|..|++|||.|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence 45999998876554443 3 345677899999999999999999999999999999999998 999999999999
Q ss_pred HHcCChHHHHHHHhh
Q 003098 581 SKKGFDGLAAFLSEQ 595 (848)
Q Consensus 581 ~~~G~~~iv~lLle~ 595 (848)
+..|+..++..++.+
T Consensus 96 v~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRH 110 (560)
T ss_pred HHcCCHHHHHHHHHH
Confidence 999999877666543
No 111
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.19 E-value=4.6e-06 Score=76.19 Aligned_cols=72 Identities=24% Similarity=0.369 Sum_probs=56.1
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-ecceeeeeCCeeeeecCCCCC-------ceeEEEE
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGVYRCFLPPHSP-------GLFLLYM 367 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~-~vpa~~~~~gvl~C~~Pph~~-------G~Vpl~v 367 (848)
+.|++|+|.|+|.+||+.|+|+|.+|.. .....+.+.||+. .++..+.++..+.|..|+... +..|+.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds---~q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~ 77 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNT---VQEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEF 77 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCc---ccccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEE
Confidence 3699999999999999999999999965 2234788999995 346667788899999998733 4555555
Q ss_pred EeC
Q 003098 368 SLD 370 (848)
Q Consensus 368 ~~~ 370 (848)
...
T Consensus 78 ~fd 80 (99)
T cd01181 78 GLD 80 (99)
T ss_pred EEe
Confidence 543
No 112
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.17 E-value=1.5e-05 Score=96.09 Aligned_cols=77 Identities=26% Similarity=0.288 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 003098 680 IAALKIQHAFRNFEVRKKMA----AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAIL 755 (848)
Q Consensus 680 ~Aa~~IQ~~~R~~~~r~~~~----aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R 755 (848)
.+++.||+.+|+|..|+.+. +++.||+.+||+..|+... ...|++.||+.||++..|+.|+..+.+++.+|+.+|
T Consensus 674 ~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~~r 752 (862)
T KOG0160|consen 674 AAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQSGVR 752 (862)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556777777777777643 7777777777777777333 445777777777777777777777777777777777
Q ss_pred HH
Q 003098 756 RW 757 (848)
Q Consensus 756 ~~ 757 (848)
++
T Consensus 753 ~~ 754 (862)
T KOG0160|consen 753 AM 754 (862)
T ss_pred HH
Confidence 77
No 113
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.17 E-value=1.8e-06 Score=95.19 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=83.5
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHH-CCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~-~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
+...+++.++..|++.. +..+++.|.|++..|.+.+|+||.||.-|+.+++++||. .+++++.+|.+|+|||.-|...
T Consensus 505 ~~~i~~~~aa~~GD~~a-lrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F 583 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSA-LRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF 583 (622)
T ss_pred cchhhhhhhhhcCCHHH-HHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence 34557899999998875 777778899999999999999999999999999999995 5899999999999999999999
Q ss_pred CCHHHHHHHHHcCCCC
Q 003098 545 GREKMVVDLLSAGAKP 560 (848)
Q Consensus 545 G~~eiv~~LL~~GA~i 560 (848)
+|.+++++|-+.-...
T Consensus 584 ~h~~v~k~L~~~~~~y 599 (622)
T KOG0506|consen 584 KHKEVVKLLEEAQYPY 599 (622)
T ss_pred CcHHHHHHHHHHhccc
Confidence 9999999998764433
No 114
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.15 E-value=4.2e-06 Score=94.29 Aligned_cols=91 Identities=19% Similarity=0.111 Sum_probs=76.9
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC--Cc--cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003098 505 IHLCAMLGYTWAILLFSWSGLS--LD--FRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 580 (848)
Q Consensus 505 LH~Aa~~G~~~~v~~LL~~Ga~--in--~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA 580 (848)
|.-|+.......+-+||.+|-. +| .-+.+|+||||+||..|++.+..+|+=+|+|+.+ +|..|.|||.||
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~ya 701 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYA 701 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhH
Confidence 3345555566677788888854 33 3466789999999999999999999999999998 899999999999
Q ss_pred HHcCChHHHHHHHhhhhhhcc
Q 003098 581 SKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 581 ~~~G~~~iv~lLle~Ga~~~l 601 (848)
...|..+|+..|+.+|+.+..
T Consensus 702 r~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 702 RQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hhcccHHHHHHHHHcCCCccc
Confidence 999999999999999987643
No 115
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.15 E-value=2.7e-06 Score=61.38 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=31.1
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCccccC
Q 003098 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK 532 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~ 532 (848)
+|.||||+|+..|+.+++++|+.+|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 116
>PF13606 Ank_3: Ankyrin repeat
Probab=98.15 E-value=2.5e-06 Score=60.25 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=28.3
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCcc
Q 003098 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLDF 529 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~ 529 (848)
+|+||||+||..|+.++|++||++|+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 117
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.12 E-value=1.5e-05 Score=70.01 Aligned_cols=79 Identities=14% Similarity=0.058 Sum_probs=67.1
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCCceeEEEEEeCCCCCc
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~~ 375 (848)
+.|..++|.-+.. |.+|+|.|..|-+ ..-.++||+.+++...|+|..+.|.+|.+.+|..++.|...++. -
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~-~ 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGS------APGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGA-T 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCC------CCcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCc-c
Confidence 5699999999976 8899999999964 13578999999998899999999999999999999999987663 4
Q ss_pred cccccccc
Q 003098 376 SQVLNFEY 383 (848)
Q Consensus 376 Sev~~Fey 383 (848)
|+...|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 66666654
No 118
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.03 E-value=5.6e-06 Score=100.53 Aligned_cols=99 Identities=26% Similarity=0.300 Sum_probs=88.1
Q ss_pred CCCCcc--ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 003098 491 GSKTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTS 568 (848)
Q Consensus 491 Ga~in~--~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~ 568 (848)
++++|. .-..|.|+||.|+..|..-++++|+.+|+++|..|..|.||||.+...|+...+.+|++.||+.++
T Consensus 644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a------ 717 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA------ 717 (785)
T ss_pred hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc------
Confidence 555554 335689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003098 569 QNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 569 ~d~~G~TpL~lA~~~G~~~iv~lLle~ 595 (848)
.|..|.+|+++|....+.+++-+|.-.
T Consensus 718 ~~~~~~~~l~~a~~~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 718 FDPDGKLPLDIAMEAANADIVLLLRLA 744 (785)
T ss_pred cCccCcchhhHHhhhccccHHHHHhhh
Confidence 789999999999877887877666544
No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.00 E-value=1.2e-05 Score=79.61 Aligned_cols=66 Identities=35% Similarity=0.479 Sum_probs=47.3
Q ss_pred CCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003098 524 GLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 524 Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~G-A~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 595 (848)
+.+||.+|.+|||||+.|+..|..+.+.+|+.+| +.+.+ .|..|.+++.+|-..|+.+++..|.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHH
Confidence 4567777777777777777777777777777777 66666 667777777777777777777777665
No 120
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.88 E-value=3.6e-05 Score=91.32 Aligned_cols=129 Identities=13% Similarity=0.003 Sum_probs=102.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc---C--CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE---G--SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 539 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~---G--a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh 539 (848)
......++.++.+|+.. .+.+.++ . .++|+.|.-|+++||+|..+-+.+++++|++.+..+ .-||.
T Consensus 23 ~~~e~~fL~a~E~gd~~--~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL 93 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVP--LVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALL 93 (822)
T ss_pred chhhHHHHHHHHcCChH--HHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHH
Confidence 34566788888999887 3444333 2 478889999999999999999999999999987766 24899
Q ss_pred HHHHcCCHHHHHHHHHcCCCCC----CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 540 WAAYYGREKMVVDLLSAGAKPN----LVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in----~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
+|...|..++|++++.+-.... ..++..+.-..+.||+.+|+..++.+|+++|+.+|++....
T Consensus 94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 9999999999999998644331 11233446678899999999999999999999999886543
No 121
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.86 E-value=5.7e-06 Score=96.49 Aligned_cols=74 Identities=26% Similarity=0.272 Sum_probs=67.1
Q ss_pred CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 527 LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 527 in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d-~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
.|..|..|+|+||+|+..|..++++.||++|++++. +| ..|+||||-|..+|+.+|+-+|+.+|+...+.|..
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~v------qD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFV------QDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeee------ccccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc
Confidence 688999999999999999999999999999999998 44 46999999999999999999999999877776653
Q ss_pred c
Q 003098 606 L 606 (848)
Q Consensus 606 l 606 (848)
.
T Consensus 119 g 119 (1267)
T KOG0783|consen 119 G 119 (1267)
T ss_pred C
Confidence 3
No 122
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.71 E-value=0.00017 Score=63.35 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=67.4
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCCceeEEEEEeCCCCCc
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v~~~~~~~~ 375 (848)
+.|..|+|.-+. -|+.|+|.|..|-+. .-.+.||+.+++...|++..|.|.+|.+.+|..++.|...++ .-
T Consensus 1 P~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G-~~ 71 (81)
T cd00604 1 PLIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDG-VT 71 (81)
T ss_pred CeEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCC-cc
Confidence 358899999875 789999999988651 357899999998889999999999999999999999998666 35
Q ss_pred ccccccccC
Q 003098 376 SQVLNFEYR 384 (848)
Q Consensus 376 Sev~~Fey~ 384 (848)
|+...|+|.
T Consensus 72 Sn~~~f~~l 80 (81)
T cd00604 72 SNGYNFEVL 80 (81)
T ss_pred cCcEeEEEc
Confidence 777778874
No 123
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.63 E-value=0.00017 Score=78.16 Aligned_cols=61 Identities=21% Similarity=0.227 Sum_probs=53.0
Q ss_pred CchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003098 502 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 502 ~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
..-|..||..|..+.|+.|++.|++||.+|.+...||.+|+.+||+.+|++|+++||-...
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r 97 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR 97 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc
Confidence 3457788899999999999999999999999999999999999999999999999987765
No 124
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.61 E-value=0.00062 Score=79.00 Aligned_cols=63 Identities=19% Similarity=0.310 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 003098 699 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQV 769 (848)
Q Consensus 699 ~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~r~~r~~~r~lr~ 769 (848)
.-++.||+.||||..|.+|++++.+++.|+ +||.+ ++++.+..||+.+|++++.|-+-+.++.
T Consensus 697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~-------K~ks~v~el~~~~rg~k~~r~ygk~~~W 759 (1001)
T KOG0164|consen 697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRY-------KLKSYVQELQRRFRGAKQMRDYGKSIRW 759 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-------HHHHHHHHHHHHHHhhhhccccCCCCCC
Confidence 378999999999999999999999999999 88844 4566788899999999665554444443
No 125
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.58 E-value=0.00013 Score=72.49 Aligned_cols=70 Identities=19% Similarity=0.164 Sum_probs=65.4
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCC-CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKP 560 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G-a~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~i 560 (848)
+.++|.+|..|+|+|+.||..|..+++.+|+.+| +.|...|..|.+++.+|-..|+.++|..|.+.-.+-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 5689999999999999999999999999999999 899999999999999999999999999999874443
No 126
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.52 E-value=0.00064 Score=78.88 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q 003098 644 AAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFL----- 718 (848)
Q Consensus 644 ~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQa~~Rg~~~Rk~~~----- 718 (848)
...-++.||+.||||.+|.+|++++ ++++.|+ +||.++ ....+..||+.+||++.++.|.
T Consensus 695 l~~lvtllQK~~RG~~~R~ry~rmk-----------a~~~ii~-wyR~~K---~ks~v~el~~~~rg~k~~r~ygk~~~W 759 (1001)
T KOG0164|consen 695 LPSLVTLLQKAWRGWLARQRYRRMK-----------ASATIIR-WYRRYK---LKSYVQELQRRFRGAKQMRDYGKSIRW 759 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHH-HHHHHH---HHHHHHHHHHHHHhhhhccccCCCCCC
Confidence 4567899999999999999998888 7888888 888654 3357888999999999998884
Q ss_pred -----HHHHHHHHHHHHHHhHHHH
Q 003098 719 -----NMRRQAIKIQAAFRGFQVR 737 (848)
Q Consensus 719 -----~~r~aai~IQa~~Rg~~~R 737 (848)
.++.+...+|..+-.|.+.
T Consensus 760 P~pP~~Lr~~~~~L~~lf~rwra~ 783 (1001)
T KOG0164|consen 760 PAPPLVLREFEELLRELFIRWRAW 783 (1001)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHH
Confidence 3555666666654444333
No 127
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.21 E-value=0.00048 Score=74.78 Aligned_cols=59 Identities=20% Similarity=0.175 Sum_probs=54.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 535 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 535 ~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
+--|..||+.|..+.|+.|++.|.++|. .|.....||.+|+..||..++++|+++||--
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~------vD~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNA------VDRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcch------hhcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 3458899999999999999999999999 8899999999999999999999999999653
No 128
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=96.98 E-value=0.001 Score=42.94 Aligned_cols=20 Identities=45% Similarity=0.783 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 003098 722 RQAIKIQAAFRGFQVRKQYG 741 (848)
Q Consensus 722 ~aai~IQa~~Rg~~~Rk~y~ 741 (848)
.+++.||++|||+++|++|+
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 45666666666666666653
No 129
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=96.98 E-value=0.023 Score=71.77 Aligned_cols=118 Identities=25% Similarity=0.244 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH----HHHHHHHHHHH--HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 003098 677 QNIIAALKIQHAFRNFEVRKKMAAAARIQHRF----RSWKVRKEFLN--MRRQAIKIQAAFRGFQVRKQYGKILWSVGVL 750 (848)
Q Consensus 677 ~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQa~~----Rg~~~Rk~~~~--~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~I 750 (848)
.-...++.||+.||++..|+++.++.++|..+ +|++.|+.+.. .-.+++++|..||....|+.|+........+
T Consensus 743 ~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~l 822 (1463)
T COG5022 743 KLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKL 822 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHH
Confidence 34467888999999888888777555555444 45555544432 2247888899999999998888888888888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 003098 751 EKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKL 827 (848)
Q Consensus 751 Q~~~R~~r~~r~~~r~lr~~~~~~~~~~~q~qa~~~~~~~~~~~R~q~~~~~~~A~irIQs~~R~~~aRr~~~~lk~ 827 (848)
|.-+.+.+..+. ....+...++.+.+|++||...+++++..++.
T Consensus 823 q~~i~~~~~~~~---------------------------------~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k 866 (1463)
T COG5022 823 QKTIKREKKLRE---------------------------------TEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKK 866 (1463)
T ss_pred HHHHHHHHHHhH---------------------------------HHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhh
Confidence 854333311000 01223566899999999999999999998873
No 130
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=96.74 E-value=0.0018 Score=73.31 Aligned_cols=76 Identities=21% Similarity=0.198 Sum_probs=66.3
Q ss_pred HHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 520 FSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 520 LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
+-..|.++-.++.+..|.||+|+..|+-++|+++|++|..--+ .+.|..|.|+||-|+..++..+..+|++.|+..
T Consensus 885 ~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~ell----d~~de~get~lhkaa~~~~r~vc~~lvdagasl 960 (1004)
T KOG0782|consen 885 THLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELL----DMADETGETALHKAACQRNRAVCQLLVDAGASL 960 (1004)
T ss_pred HHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHH----HHHhhhhhHHHHHHHHhcchHHHHHHHhcchhh
Confidence 3457888889999999999999999999999999999875322 227799999999999999999999999999864
No 131
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.58 E-value=0.002 Score=78.83 Aligned_cols=89 Identities=18% Similarity=0.104 Sum_probs=75.1
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.+.+|.++..+... +.++|++ |+++|..|..|.||||.+...|+...+..|+++|++.++.|..|.+||++|...
T Consensus 655 ~~~s~lh~a~~~~~~~--~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSG--AVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred cccchhhhhhccchHH--HHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence 4566777777777554 5666666 999999999999999999999999999999999999999999999999999887
Q ss_pred CCHHHHHHHHHc
Q 003098 545 GREKMVVDLLSA 556 (848)
Q Consensus 545 G~~eiv~~LL~~ 556 (848)
.+.+++-+|...
T Consensus 733 ~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 733 ANADIVLLLRLA 744 (785)
T ss_pred ccccHHHHHhhh
Confidence 777776665443
No 132
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=96.53 E-value=0.0033 Score=40.54 Aligned_cols=19 Identities=26% Similarity=0.195 Sum_probs=15.3
Q ss_pred HHHHHHHHHHhhhHHHHHH
Q 003098 646 EAAARIQAAFREHSLKVQT 664 (848)
Q Consensus 646 ~Aai~IQ~~~R~~~~Rkr~ 664 (848)
.||+.||++|||+++|++|
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~ 20 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRY 20 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5788888888888888776
No 133
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.48 E-value=0.019 Score=64.81 Aligned_cols=71 Identities=24% Similarity=0.261 Sum_probs=58.1
Q ss_pred HHHHHHHHHCCCCCccc------cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChH
Q 003098 514 TWAILLFSWSGLSLDFR------DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDG 587 (848)
Q Consensus 514 ~~~v~~LL~~Ga~in~~------D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~ 587 (848)
...|++|.+++++.|.. |..-.|+||+|+..|..++|..||+.|+|+.+ +|..|.||.+++. +.+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~---nkd 474 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA---NKD 474 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc---cHH
Confidence 56788899988887653 44567999999999999999999999988877 9999999999987 445
Q ss_pred HHHHHH
Q 003098 588 LAAFLS 593 (848)
Q Consensus 588 iv~lLl 593 (848)
+-..++
T Consensus 475 Vk~~F~ 480 (591)
T KOG2505|consen 475 VKSIFI 480 (591)
T ss_pred HHHHHH
Confidence 544333
No 134
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=96.34 E-value=0.0014 Score=75.80 Aligned_cols=209 Identities=17% Similarity=0.219 Sum_probs=124.1
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC-CCceeEEEEEeCCCCCc
Q 003098 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHKPI 375 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-~~G~Vpl~v~~~~~~~~ 375 (848)
.|.|+.|..+...+|++|+..|.++.. ......+|..+...-++|+. .+|.|.+.++.-...+-
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~~~~ 308 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSETSD 308 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecccccccc
Confidence 689999999999999999999999854 45667789999999999888 59999999886443332
Q ss_pred ccccccccCC----CCCccCCCCccccchhhHHHHHHHHHHHHhccccccccccCCCCCCChHHHHHHhhhhhcCCCCHH
Q 003098 376 SQVLNFEYRS----PQLHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWA 451 (848)
Q Consensus 376 Sev~~Fey~~----~~~~~~~~~~~~~~~~~~~~l~~Rl~~LL~~~~~~l~il~sk~~~~~l~e~~~~~~~i~~~~~~~~ 451 (848)
+..-.-+... +.++.+.++.+. .++.++ ++++|.++.++ +.++...+... . +|
T Consensus 309 ~~~~~~~~~~~~~~~~i~~yvp~t~~--------q~~~~a---------l~ivg~n~~~~-l~~a~~~~~~s--~--~~- 365 (605)
T KOG3836|consen 309 SNNSNSSPPTSSSTKAIFTYVPSTDR--------QLIEYA---------LQIVGLNMNGK-LEDARNIANSS--L--SP- 365 (605)
T ss_pred ccccccCCccCCCcccceeeecCCCc--------eeeeeE---------EEEecccccCc-hhhhcCCcccc--C--CC-
Confidence 2222222222 224555554442 122222 78888888776 44444332000 0 00
Q ss_pred HHHHHhCCCCCCcccccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcccc
Q 003098 452 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD 531 (848)
Q Consensus 452 ~li~~l~~~~~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D 531 (848)
...........+...++.- .....+ .+. -.--...++ |+..+....+-.|++.|+.++..|
T Consensus 366 --------~~~~~~~n~~~~s~~aI~~-------~~~~~~--~s~-~~lSl~~~~-~~~~~~ss~v~~lik~~~~~~~~d 426 (605)
T KOG3836|consen 366 --------TSPMMNNNSEQLSPYAIMS-------QKPTNN--LST-VNLSLCDVR-AALNNSSSLVFTLIKKGAHPNDDD 426 (605)
T ss_pred --------CCcceeccccccCccceee-------ecCCCC--CCc-cceeeehhh-hhhcCCccceeeeecccCccchhc
Confidence 0000000111111111100 000000 000 000011122 566677777778888999999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003098 532 KYGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 532 ~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
..|+||+|+++..|..++...++....+++.
T Consensus 427 ~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~ 457 (605)
T KOG3836|consen 427 KFGFTPLHIPQISGDPRIIQLLLNCKVAISL 457 (605)
T ss_pred ccccccccccCCCCCHHHhhhhhhhhhhhhc
Confidence 9999999999999999999888876655554
No 135
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.15 E-value=0.0088 Score=39.44 Aligned_cols=28 Identities=46% Similarity=0.492 Sum_probs=19.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003098 534 GWTALHWAAYYGREKMVVDLLSAGAKPN 561 (848)
Q Consensus 534 G~TpLh~Aa~~G~~eiv~~LL~~GA~in 561 (848)
|.||||+|+..|+.++++.|+..|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5677777777777777777777666543
No 136
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=96.04 E-value=0.025 Score=51.81 Aligned_cols=82 Identities=18% Similarity=0.148 Sum_probs=66.1
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC-------eecceeee----eCCeeeeecCCC------C
Q 003098 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-------VRVPAEFV----QAGVYRCFLPPH------S 359 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~-------~~vpa~~~----~~gvl~C~~Pph------~ 359 (848)
.|..++-..++..||-+|.++|.++.. ....+.|++ .++-+.+- ....++|-+||- .
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k------~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK------PDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC------CCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 588999999999999999999987642 368899998 55544432 556799999987 5
Q ss_pred CceeEEEEEeCCCCCcccccccccC
Q 003098 360 PGLFLLYMSLDGHKPISQVLNFEYR 384 (848)
Q Consensus 360 ~G~Vpl~v~~~~~~~~Sev~~Fey~ 384 (848)
|=.|+|++...++..+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 6778888888766789999999995
No 137
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=96.03 E-value=0.02 Score=52.05 Aligned_cols=82 Identities=21% Similarity=0.167 Sum_probs=60.9
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe--------e----cceeeeeCCeeeeecCCC----
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV--------R----VPAEFVQAGVYRCFLPPH---- 358 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~--------~----vpa~~~~~gvl~C~~Pph---- 358 (848)
++.|.+.|-.-++.+||-||.++|.++.. ...+.|-+. + +..+.++...|+|-+||-
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 46799999999999999999999987743 244555421 1 223445678899999998
Q ss_pred --CCceeEEEEEeCCCCCcccccccccC
Q 003098 359 --SPGLFLLYMSLDGHKPISQVLNFEYR 384 (848)
Q Consensus 359 --~~G~Vpl~v~~~~~~~~Sev~~Fey~ 384 (848)
.|=.|.|++....+ ..|+...|+|.
T Consensus 74 I~~pV~V~~~l~~~~~-~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGKR-KRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCCC-CcCCCCCcEec
Confidence 56677777765444 68999999995
No 138
>PTZ00014 myosin-A; Provisional
Probab=95.92 E-value=0.016 Score=71.54 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 723 QAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRW 757 (848)
Q Consensus 723 aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~ 757 (848)
.++.||++||||+.|++|++.+.++++||+.||+|
T Consensus 779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~ 813 (821)
T PTZ00014 779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRH 813 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555555555555555555
No 139
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=95.77 E-value=0.032 Score=49.09 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=55.6
Q ss_pred eEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC-----------CCceeEEEEEeCCCCCcccccc
Q 003098 312 TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-----------SPGLFLLYMSLDGHKPISQVLN 380 (848)
Q Consensus 312 ~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-----------~~G~Vpl~v~~~~~~~~Sev~~ 380 (848)
.-+-++|.+|.. ++.+-||++++-+.+=.+-.|.|.+|+- .|..||+.+...++..=+.-..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 667889999965 7999999999998888888999999987 6789999999988865566667
Q ss_pred cccC
Q 003098 381 FEYR 384 (848)
Q Consensus 381 Fey~ 384 (848)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 7774
No 140
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=95.59 E-value=0.015 Score=39.59 Aligned_cols=21 Identities=57% Similarity=0.868 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHH
Q 003098 721 RRQAIKIQAAFRGFQVRKQYG 741 (848)
Q Consensus 721 r~aai~IQa~~Rg~~~Rk~y~ 741 (848)
..++++||+.|||+++|+.|+
T Consensus 3 ~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 3 TRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 457788888888888888773
No 141
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=95.17 E-value=0.063 Score=67.58 Aligned_cols=92 Identities=24% Similarity=0.239 Sum_probs=60.3
Q ss_pred HHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHH--HH------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 650 RIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEV--RK------KMAAAARIQHRFRSWKVRKEFLNMR 721 (848)
Q Consensus 650 ~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~--r~------~~~aA~~IQa~~Rg~~~Rk~~~~~r 721 (848)
++|+..||+..|..+...- +-.....-....||..||+++. -+ ...-++.+|++.||+..|+.+.+..
T Consensus 540 ~~qa~~rg~~~r~~~~~~~----~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~ 615 (1401)
T KOG2128|consen 540 RIQASERGFSTRNKFRSRL----DFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKL 615 (1401)
T ss_pred hhhhhccccchHHHHHhhh----hHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 4478888888776664322 2223345566778888887763 11 1236777888888888777775544
Q ss_pred H-------HHHHHHHHHHhHHHHHHHHHHHH
Q 003098 722 R-------QAIKIQAAFRGFQVRKQYGKILW 745 (848)
Q Consensus 722 ~-------aai~IQa~~Rg~~~Rk~y~~~~~ 745 (848)
+ .+++||+++|+...|..|+.+..
T Consensus 616 q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~~ 646 (1401)
T KOG2128|consen 616 QYFKDNMTKIIKIQSKIRKFPNRKDYKLLFT 646 (1401)
T ss_pred HHHHHhhhhHHHHHHHHHhcccchHHHHHhc
Confidence 3 67778888888888877776654
No 142
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.11 E-value=0.051 Score=67.61 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=73.6
Q ss_pred CCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-ecceeeeeCCe-eeeecCCCC-CceeEEEEE
Q 003098 292 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGV-YRCFLPPHS-PGLFLLYMS 368 (848)
Q Consensus 292 ~~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~-~vpa~~~~~gv-l~C~~Pph~-~G~Vpl~v~ 368 (848)
.-+-+.|.++.|.|||..|||+|+++|+++-. .+...|++|+. +-+....+++. ++|..|+.. ++.-|+.|.
T Consensus 139 s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~ 213 (1025)
T KOG3610|consen 139 SLQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVS 213 (1025)
T ss_pred eecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEE
Confidence 35677899999999999999999999999865 57799999998 77777788887 999999986 488888888
Q ss_pred eCCCCCccc-ccccccCC
Q 003098 369 LDGHKPISQ-VLNFEYRS 385 (848)
Q Consensus 369 ~~~~~~~Se-v~~Fey~~ 385 (848)
.+... +.. ...|+|..
T Consensus 214 f~~~~-~~~~~~~f~y~~ 230 (1025)
T KOG3610|consen 214 FDRTP-QKLTPLAFNYTA 230 (1025)
T ss_pred ecccc-cccCCCCccccc
Confidence 87664 444 57788876
No 143
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=95.06 E-value=0.33 Score=61.41 Aligned_cols=146 Identities=20% Similarity=0.204 Sum_probs=87.8
Q ss_pred HHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHHHH---------HHHHHHHHHHHHHHHHHHHH
Q 003098 649 ARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMA---------AAARIQHRFRSWKVRKEFLN 719 (848)
Q Consensus 649 i~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~---------aA~~IQa~~Rg~~~Rk~~~~ 719 (848)
..-++.+|+.+.+....-+. ++..-....-...|...|+...+.... --.++|+..||+..|..|..
T Consensus 481 ~k~~~~~~~~l~~~~~~~~~----ee~~~~~~~~is~q~~v~~i~~~~~l~~~~~s~~~s~~~~~qa~~rg~~~r~~~~~ 556 (1401)
T KOG2128|consen 481 MKWLAYIYGNLVREAKKWLL----EELHFEYSSLISLQALVRGIVLRSALFSLYPSLGKSEKLRIQASERGFSTRNKFRS 556 (1401)
T ss_pred hhhHHHhhhhhhhhhhcccc----HHHHHHHHHHhhHHHHhhhhHHHhhHHHHhhhhccccchhhhhhccccchHHHHHh
Confidence 45566667766665443222 222222222233555555555544211 23445888999887776654
Q ss_pred HHH-------HHHHHHHHHHhHHH---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCchhHH
Q 003098 720 MRR-------QAIKIQAAFRGFQV---RK-QYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEE 788 (848)
Q Consensus 720 ~r~-------aai~IQa~~Rg~~~---Rk-~y~~~~~aa~~IQ~~~R~~r~~r~~~r~lr~~~~~~~~~~~q~qa~~~~~ 788 (848)
... .+..||+.|||+.. +. .+......++.+|++.|+. ..|+.+
T Consensus 557 ~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~-lsrk~~------------------------ 611 (1401)
T KOG2128|consen 557 RLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGA-LSRKKY------------------------ 611 (1401)
T ss_pred hhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHH-HHHhhH------------------------
Confidence 332 67789999999884 11 1223334788899988888 333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 003098 789 DFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKL 827 (848)
Q Consensus 789 ~~~~~~R~q~~~~~~~A~irIQs~~R~~~aRr~~~~lk~ 827 (848)
.+ +.+.+.....+++.||+.+|....|..|+.+..
T Consensus 612 --~~--~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~~ 646 (1401)
T KOG2128|consen 612 --SR--KLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLFT 646 (1401)
T ss_pred --HH--HHHHHHHhhhhHHHHHHHHHhcccchHHHHHhc
Confidence 11 234445677889999999999999999888743
No 144
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=94.94 E-value=0.096 Score=47.64 Aligned_cols=82 Identities=11% Similarity=0.045 Sum_probs=59.6
Q ss_pred eeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-------ec-----ceeeeeCCeeeeecCCC------
Q 003098 297 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-------RV-----PAEFVQAGVYRCFLPPH------ 358 (848)
Q Consensus 297 ~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~-------~v-----pa~~~~~gvl~C~~Pph------ 358 (848)
.|.+++=.-|++.||.||.+++.... +-...+.|-+. +. |+.+-....+++-+||-
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~------K~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQ------KEDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccC------CCCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 69999999999999999999998653 22455555442 11 23344456699999997
Q ss_pred CCceeEEEEEeCCCCCcccccccccC
Q 003098 359 SPGLFLLYMSLDGHKPISQVLNFEYR 384 (848)
Q Consensus 359 ~~G~Vpl~v~~~~~~~~Sev~~Fey~ 384 (848)
.|=.|-+++.......+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 45566677777555579999999995
No 145
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.91 E-value=0.041 Score=36.02 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=26.3
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCc
Q 003098 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLD 528 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in 528 (848)
.|.||||+|+..|..++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998765
No 146
>PTZ00014 myosin-A; Provisional
Probab=94.83 E-value=0.066 Score=66.34 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 003098 699 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQ 739 (848)
Q Consensus 699 ~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~ 739 (848)
..++.||++||||+.|+.|++++.+++.||++||+|+.++.
T Consensus 778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE 818 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 37889999999999999999999999999999999998864
No 147
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=94.76 E-value=0.032 Score=37.92 Aligned_cols=21 Identities=33% Similarity=0.248 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHhhhHHHHHH
Q 003098 644 AAEAAARIQAAFREHSLKVQT 664 (848)
Q Consensus 644 ~~~Aai~IQ~~~R~~~~Rkr~ 664 (848)
...+|+.||++|||+++|++|
T Consensus 2 ~~~aa~~IQa~~Rg~~~r~~y 22 (26)
T smart00015 2 LTRAAIIIQAAWRGYLARKRY 22 (26)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 356788888888888888776
No 148
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.94 E-value=0.095 Score=59.46 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=42.3
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
.+..--|+||+|+..|...+|..||..|+|+...|..|.||..+++
T Consensus 426 ~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 426 NDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred cccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 4455689999999999999999999999999999999999999876
No 149
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.60 E-value=0.13 Score=62.18 Aligned_cols=87 Identities=16% Similarity=0.072 Sum_probs=62.4
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCc----------cccCCCC
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD----------FRDKYGW 535 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in----------~~D~~G~ 535 (848)
+.+.++.+.-+.+++ +.++|++ +..+ ..+|-+|...|+.++|++++.+-.... ..-.-+-
T Consensus 62 Gr~al~iai~nenle--~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~di 132 (822)
T KOG3609|consen 62 GRLALHIAIDNENLE--LQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDI 132 (822)
T ss_pred hhhceecccccccHH--HHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCc
Confidence 445555555555555 6666555 3333 357778899999999999997533221 1223478
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003098 536 TALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 536 TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
|||.+||..++.||+++||..|+.+-.
T Consensus 133 tPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 133 TPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred cHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 999999999999999999999999876
No 150
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=89.61 E-value=28 Score=42.10 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=28.8
Q ss_pred HHHHHhhhHHHHHHHHhhcCCh------HHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 003098 651 IQAAFREHSLKVQTKAIRFSSP------EEEAQNIIAALKIQHAFRNFEVRKKMA 699 (848)
Q Consensus 651 IQ~~~R~~~~Rkr~~~~r~~~~------~~~~~~~~Aa~~IQ~~~R~~~~r~~~~ 699 (848)
|=+-+.-|+.+.|..+.+++.. ..-+-+..+++++|+..|||++|++++
T Consensus 779 lv~kVn~WLv~sRWkk~q~~a~sVIKLkNkI~yRae~v~k~Q~~~Rg~L~rkr~~ 833 (1259)
T KOG0163|consen 779 LVAKVNKWLVRSRWKKSQYGALSVIKLKNKIIYRAECVLKAQRIARGYLARKRHR 833 (1259)
T ss_pred HHHHHHHHHHHhHHHHhhhhhhheeehhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3344677888888888776542 222233345556666666666666543
No 151
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=83.56 E-value=2.9 Score=43.52 Aligned_cols=95 Identities=14% Similarity=0.065 Sum_probs=65.8
Q ss_pred CCchHHHHHHcCCHHHHHHHHHCCCCCccccC----CCCcHHHHHHHc--CCHHHHHHHHHcC-CCCCCCCCCCCCCCCC
Q 003098 501 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK----YGWTALHWAAYY--GREKMVVDLLSAG-AKPNLVTDPTSQNPGG 573 (848)
Q Consensus 501 G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~----~G~TpLh~Aa~~--G~~eiv~~LL~~G-A~in~~td~~~~d~~G 573 (848)
-.++|-+|..++...++.+|+.+ .+....|. .+.--+-++... -...+.+.+|..| +++|. +..+-..|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~---~F~~~NSG 254 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNK---KFQKVNSG 254 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccch---hhhccCCc
Confidence 35788888888888888888853 11111111 122234444333 4567888888887 44554 34466789
Q ss_pred CCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 574 LNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 574 ~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
.|-|+-|..++..+++.+|+++||..
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999999999854
No 152
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=74.44 E-value=4.2 Score=48.58 Aligned_cols=65 Identities=26% Similarity=0.389 Sum_probs=44.0
Q ss_pred cccccCccccccCCCcchHHhhhhhccCCee--eE---EEeeeccCCCCCcceeeeeeccCCC---------CceEEEEe
Q 003098 4 NFRKDGHNWKKKKDGKTVKEAHEHLKVGNEE--RI---HVYYAHGEDSPTFVRRCYWLLDKTL---------ENIVLVHY 69 (848)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 69 (848)
+|-.|||.|-- -|.=....|.|.. +. ++|+-=+|.....-||.|.|+-... ++.+||||
T Consensus 78 ~fasDGy~wad-------~E~~y~~~~~G~~lEi~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY 150 (669)
T PF08549_consen 78 NFASDGYVWAD-------PEQAYTHEVNGYTLEIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHY 150 (669)
T ss_pred cCCCCcceecC-------hhheeeecCCCeEEEEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEe
Confidence 58899999975 2444445554432 22 1344435677789999999996544 67899999
Q ss_pred eecCCC
Q 003098 70 RETHEG 75 (848)
Q Consensus 70 ~~~~~~ 75 (848)
..-...
T Consensus 151 ~~a~~~ 156 (669)
T PF08549_consen 151 GPAPPQ 156 (669)
T ss_pred cCCCcc
Confidence 877653
No 153
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=71.46 E-value=11 Score=45.20 Aligned_cols=45 Identities=29% Similarity=0.444 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 003098 698 MAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILW 745 (848)
Q Consensus 698 ~~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~ 745 (848)
...|.+||+.||.+.+|++|.++|.-+.++ .-|.+.|++|.-.|.
T Consensus 696 d~~A~~IQkAWRrfv~rrky~k~ree~t~l---l~gKKeRRr~Si~R~ 740 (1106)
T KOG0162|consen 696 DGMARRIQKAWRRFVARRKYEKMREEATKL---LLGKKERRRYSINRN 740 (1106)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHHH
Confidence 348899999999999999999999866654 336677777755543
No 154
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=71.06 E-value=6.5 Score=48.32 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 003098 798 AEERVERSVVRVQSMFRSKKAQEEYRRMKLAH 829 (848)
Q Consensus 798 ~~~~~~~A~irIQs~~R~~~aRr~~~~lk~~~ 829 (848)
.+++.+++++.||++||++.+|++.+.+-+++
T Consensus 24 e~rk~e~~av~vQs~~Rg~~~r~~~~~~~R~~ 55 (1001)
T KOG0942|consen 24 EERKQEKNAVKVQSFWRGFRVRHNQKLLFREE 55 (1001)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678899999999999999999887776554
No 155
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=69.09 E-value=15 Score=44.27 Aligned_cols=35 Identities=43% Similarity=0.526 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 003098 694 VRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGF 734 (848)
Q Consensus 694 ~r~~~~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~ 734 (848)
+|++.+||..||+.+|||..|++|+ +.||.-|+..
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk~~------~~I~~e~d~~ 60 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKKAQ------IEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHh
Confidence 3455678888888888888887753 5566655543
No 156
>KOG0165 consensus Microtubule-associated protein Asp [Cytoskeleton]
Probab=67.89 E-value=2.8e+02 Score=34.27 Aligned_cols=140 Identities=23% Similarity=0.233 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHhhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 003098 678 NIIAALKIQHAFRNFEVRKK---MAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAI 754 (848)
Q Consensus 678 ~~~Aa~~IQ~~~R~~~~r~~---~~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~ 754 (848)
+..++.++|..+.....+.. -.++..+|..-..+..+..|-....++..+|++.+.|+.+..|.-...++...|+..
T Consensus 147 q~~~~~~~~k~~~~~~~~~~~v~k~~~~~~~~~~~~~~~~~DfG~q~~a~~tl~Sy~~~WL~~~L~~IF~~~~~~~~khl 226 (1023)
T KOG0165|consen 147 QSRAAVTIQKAFCRMVTRKLETQKCAALRIQFFLQMAVYRRDFGQQKRAAITLQSYFRTWLTRKLFLIFRKAAVVLQKHL 226 (1023)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHhhhHHHhhhchhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhccchhcCcHHH
Confidence 33455566655443333221 226777777777777888888888899999999999999988877666666555442
Q ss_pred HHHHHHHHHHhhhhhhh--------hhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 003098 755 LRWRLKRKGFRGLQVDR--------VEVEAVSDPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRM 825 (848)
Q Consensus 755 R~~r~~r~~~r~lr~~~--------~~~~~~~~q~qa~~~~~~~~~~~R~q~~~~~~~A~irIQs~~R~~~aRr~~~~l 825 (848)
-.. .+.-....+.... ...+...++ .+++.+.-+....+...-+..||.+|+.+.+-..|.-.
T Consensus 227 M~k-L~~f~s~~~FS~ptmlk~y~~~~s~~~ii~-------~~~kEAL~k~~L~~i~~L~~~I~~A~~~~~~~~~~~I~ 297 (1023)
T KOG0165|consen 227 MHK-LRAFLSAKHFSQPTMLKVYLQIRSSVIIIQ-------ARSKEALQKRKLQEIKNLTIKIQAAWRRYRAKKYLCIV 297 (1023)
T ss_pred HHH-HHHHHHHHHhcCchHHHHHHHhccCceeec-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 111 1110111111000 000000011 11122222233345667888999999988877666543
No 157
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=67.18 E-value=7.6 Score=45.90 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=36.0
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCc
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT 536 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~T 536 (848)
|..++..|..|.+|+|+++..|...++..++..-.+++.....|.+
T Consensus 419 ~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 419 GAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred cCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 6778888999999999999999999999887665555544444443
No 158
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=67.04 E-value=10 Score=39.66 Aligned_cols=48 Identities=25% Similarity=0.215 Sum_probs=40.5
Q ss_pred CHHHHHHHHHCC-CCCcc---ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 003098 513 YTWAILLFSWSG-LSLDF---RDKYGWTALHWAAYYGREKMVVDLLSAGAKP 560 (848)
Q Consensus 513 ~~~~v~~LL~~G-a~in~---~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~i 560 (848)
...+++..|.+| +++|. +-..|.|-|.-|..+++.+++.+||++||-.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 467788888888 67775 3457999999999999999999999999954
No 159
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=66.99 E-value=66 Score=43.92 Aligned_cols=38 Identities=29% Similarity=0.505 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHH---HHHHHHHHHHHH
Q 003098 720 MRRQAIKIQAAFRGFQVRKQYGKILW---SVGVLEKAILRW 757 (848)
Q Consensus 720 ~r~aai~IQa~~Rg~~~Rk~y~~~~~---aa~~IQ~~~R~~ 757 (848)
+..-++.+|+.+|||.+|+.|.+... ++.+||+.+|.|
T Consensus 772 ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~ 812 (1930)
T KOG0161|consen 772 LSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAY 812 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456667777777777777755543 666777776666
No 160
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=66.23 E-value=5.1e+02 Score=35.95 Aligned_cols=45 Identities=22% Similarity=0.129 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHH
Q 003098 643 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVR 695 (848)
Q Consensus 643 ~~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r 695 (848)
....-++.+|+.+|||++|+.|.+. ..+..|+..||+..|.|...
T Consensus 771 ~ls~ii~~fQA~~Rg~l~r~~~~kr--------~~~~~ai~~iQ~N~r~~~~l 815 (1930)
T KOG0161|consen 771 KLSQIITLFQAAIRGYLARKEFKKR--------LQQLDAIKVIQRNIRAYLKL 815 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHhh
Confidence 3566788889999999999888653 46778889999888776543
No 161
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=63.91 E-value=13 Score=45.76 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 694 VRKKMAAAARIQHRFRSWKVRKEFLNMRR 722 (848)
Q Consensus 694 ~r~~~~aA~~IQa~~Rg~~~Rk~~~~~r~ 722 (848)
.|++.++|+.+|+.|||++.|++++..-+
T Consensus 25 ~rk~e~~av~vQs~~Rg~~~r~~~~~~~R 53 (1001)
T KOG0942|consen 25 ERKQEKNAVKVQSFWRGFRVRHNQKLLFR 53 (1001)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 45566788888888888888877665443
No 162
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=63.24 E-value=8.3 Score=48.77 Aligned_cols=76 Identities=21% Similarity=0.187 Sum_probs=51.7
Q ss_pred CCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC--eecceeeeeCCeeeeecCCCC--CceeEEEEE
Q 003098 293 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE--VRVPAEFVQAGVYRCFLPPHS--PGLFLLYMS 368 (848)
Q Consensus 293 ~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~--~~vpa~~~~~gvl~C~~Pph~--~G~Vpl~v~ 368 (848)
-+.++|++++|.-++.+||+.++|.|.++...-+....+..+ =|- .+++.+..-..-+.|..-++. ||.|.+.|-
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~V-a~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~ 125 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKV-AGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVG 125 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceE-eeeecCCCccccccccceeeccCCCCCCCCceeEEec
Confidence 457779999999999999999999999986532211112111 111 224444555566888888775 788888887
Q ss_pred e
Q 003098 369 L 369 (848)
Q Consensus 369 ~ 369 (848)
.
T Consensus 126 ~ 126 (1025)
T KOG3610|consen 126 V 126 (1025)
T ss_pred c
Confidence 3
No 163
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=62.11 E-value=20 Score=43.27 Aligned_cols=35 Identities=40% Similarity=0.457 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 003098 676 AQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWK 712 (848)
Q Consensus 676 ~~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQa~~Rg~~ 712 (848)
.|+++||..||+.||+|..|++ ++..||.-|+...
T Consensus 27 rrr~~aa~~iq~~lrsyl~Rkk--~~~~I~~e~d~~f 61 (1096)
T KOG4427|consen 27 RRREAAALFIQRVLRSYLVRKK--AQIEIQEEFDNLF 61 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhh
Confidence 5678999999999999999985 6778887777653
No 164
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=61.76 E-value=3.9e+02 Score=33.02 Aligned_cols=24 Identities=17% Similarity=0.105 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHH
Q 003098 643 TAAEAAARIQAAFREHSLKVQTKA 666 (848)
Q Consensus 643 ~~~~Aai~IQ~~~R~~~~Rkr~~~ 666 (848)
-...+++++|++.|||++|+|+..
T Consensus 811 yRae~v~k~Q~~~Rg~L~rkr~~~ 834 (1259)
T KOG0163|consen 811 YRAECVLKAQRIARGYLARKRHRP 834 (1259)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhch
Confidence 356789999999999999998853
No 165
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=54.18 E-value=25 Score=42.47 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 003098 790 FYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQ 831 (848)
Q Consensus 790 ~~~~~R~q~~~~~~~A~irIQs~~R~~~aRr~~~~lk~~~~q 831 (848)
.+.++|.+.+. --+.+||..||.+.+|++|.++|.++-.
T Consensus 686 ~LEemRer~~d---~~A~~IQkAWRrfv~rrky~k~ree~t~ 724 (1106)
T KOG0162|consen 686 LLEEMRERKWD---GMARRIQKAWRRFVARRKYEKMREEATK 724 (1106)
T ss_pred HHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555443 4578999999999999999999987654
No 166
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=48.80 E-value=27 Score=35.51 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=32.8
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHh
Q 003098 537 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 594 (848)
Q Consensus 537 pLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle 594 (848)
-|.+|+..|-...+--.+++|.+++. ++|..|+.++|..|+.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------------HHHHHHHHhhHHHHHHHhhc
Confidence 45677777777777777777777774 36777777777777777653
No 167
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=47.71 E-value=45 Score=29.43 Aligned_cols=64 Identities=20% Similarity=0.148 Sum_probs=39.5
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC-eecceee-eeCCeeee--ecCCC-CCceeEEEEE
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVPAEF-VQAGVYRC--FLPPH-SPGLFLLYMS 368 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~-~~vpa~~-~~~gvl~C--~~Pph-~~G~Vpl~v~ 368 (848)
..|.-++|.---..++++|+|.|.+|.. .+.||. ++|.... -.++-++- .++.. .||..++.+-
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred CeEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 4689999999999999999999999944 256665 5554432 23333222 33333 4677777663
No 168
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=47.26 E-value=21 Score=40.59 Aligned_cols=23 Identities=26% Similarity=0.302 Sum_probs=18.1
Q ss_pred hhhHHHHHHHHHHHhhhHHHHHH
Q 003098 642 RTAAEAAARIQAAFREHSLKVQT 664 (848)
Q Consensus 642 r~~~~Aai~IQ~~~R~~~~Rkr~ 664 (848)
..+-+||+.||+|||++.+|...
T Consensus 14 ~raikaAilIQkWYRr~~ARle~ 36 (631)
T KOG0377|consen 14 TRAIKAAILIQKWYRRYEARLEA 36 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467899999999999988654
No 169
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=46.13 E-value=26 Score=39.90 Aligned_cols=20 Identities=35% Similarity=0.476 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003098 698 MAAAARIQHRFRSWKVRKEF 717 (848)
Q Consensus 698 ~~aA~~IQa~~Rg~~~Rk~~ 717 (848)
.+||+.||+|||+|.+|.+.
T Consensus 17 ikaAilIQkWYRr~~ARle~ 36 (631)
T KOG0377|consen 17 IKAAILIQKWYRRYEARLEA 36 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34666666666666666543
No 170
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=45.91 E-value=29 Score=29.81 Aligned_cols=47 Identities=13% Similarity=0.027 Sum_probs=28.0
Q ss_pred chHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003098 503 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSA 556 (848)
Q Consensus 503 T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~ 556 (848)
..|..|...|+.++++.+++.+ .++ ...|..|...-+-++++.|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4456666666666666666543 221 2456666666666666666653
No 171
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=41.46 E-value=73 Score=31.18 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=51.0
Q ss_pred eccCCccCCCCeEEEEECc-CCCCcccCCCcceEEEcCC----e-ecceeeeeCCeeeeecCCC---CCceeEEEEEeCC
Q 003098 301 VSPAWAFSNEKTKILVTGF-FHKDCLHLSKSNMFCVCGE----V-RVPAEFVQAGVYRCFLPPH---SPGLFLLYMSLDG 371 (848)
Q Consensus 301 ~sP~w~~~~gg~kVlV~G~-~~~~~~~~~~~~~~c~FG~----~-~vpa~~~~~gvl~C~~Pph---~~G~Vpl~v~~~~ 371 (848)
+-|.--.++.. ||.|+=. .+.. ...+.+.|-. + .+++.+|.+-|++..+|.. -+|.|.+.|.|++
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~l~~-----~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g 76 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDPLDE-----EDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDG 76 (142)
T ss_pred ecCceeecCCC-EEEEEEeCCCCC-----CCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECC
Confidence 45777788888 8877654 2221 2356777655 3 5888899999999999999 8999999999987
Q ss_pred CC
Q 003098 372 HK 373 (848)
Q Consensus 372 ~~ 373 (848)
-.
T Consensus 77 ~~ 78 (142)
T PF14545_consen 77 VS 78 (142)
T ss_pred EE
Confidence 54
No 172
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=39.83 E-value=45 Score=28.64 Aligned_cols=46 Identities=24% Similarity=0.304 Sum_probs=30.6
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003098 537 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 537 pLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 595 (848)
-|..|...|+.++++.+++.+ .++. ..+..|....+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~~------------~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPDN------------DCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccHH------------HHHHHHHHHhhHHHHHHHHHh
Confidence 466777777777777777655 2221 246777777777777777765
No 173
>KOG0165 consensus Microtubule-associated protein Asp [Cytoskeleton]
Probab=37.45 E-value=6e+02 Score=31.58 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=53.2
Q ss_pred HhhhHHHHHHHHHHHhhhHHHHHHHHhhcCC---hHHHHHHHHHHHHHHHHHhhHHHHHHHH---HHHHHHHHHHHHHHH
Q 003098 641 YRTAAEAAARIQAAFREHSLKVQTKAIRFSS---PEEEAQNIIAALKIQHAFRNFEVRKKMA---AAARIQHRFRSWKVR 714 (848)
Q Consensus 641 ~r~~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~---~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~---aA~~IQa~~Rg~~~R 714 (848)
+--...|+..+|++++.|+.+.-|.--+... .+..+..+.+...-|.+----+.+..+. ....||..+.--+..
T Consensus 189 fG~q~~a~~tl~Sy~~~WL~~~L~~IF~~~~~~~~khlM~kL~~f~s~~~FS~ptmlk~y~~~~s~~~ii~~~~kEAL~k 268 (1023)
T KOG0165|consen 189 FGQQKRAAITLQSYFRTWLTRKLFLIFRKAAVVLQKHLMHKLRAFLSAKHFSQPTMLKVYLQIRSSVIIIQARSKEALQK 268 (1023)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHhccchhcCcHHHHHHHHHHHHHHHhcCchHHHHHHHhccCceeeccchHHHHHH
Confidence 3345778999999999999887664322111 1333333333333332211111222111 233445544444444
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 003098 715 KEFLNMRRQAIKIQAAFRGFQVRKQYGK 742 (848)
Q Consensus 715 k~~~~~r~aai~IQa~~Rg~~~Rk~y~~ 742 (848)
.....+..-.++||+.|+.+..-..|.-
T Consensus 269 ~~L~~i~~L~~~I~~A~~~~~~~~~~~I 296 (1023)
T KOG0165|consen 269 RKLQEIKNLTIKIQAAWRRYRAKKYLCI 296 (1023)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 4455555667777777777766555533
No 174
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=33.07 E-value=16 Score=30.19 Aligned_cols=9 Identities=44% Similarity=1.032 Sum_probs=5.5
Q ss_pred ccCcccccc
Q 003098 7 KDGHNWKKK 15 (848)
Q Consensus 7 ~~~~~~~~~ 15 (848)
.|||.|||=
T Consensus 2 ~Dgy~WRKY 10 (60)
T PF03106_consen 2 DDGYRWRKY 10 (60)
T ss_dssp -SSS-EEEE
T ss_pred CCCCchhhc
Confidence 488888864
No 175
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=31.28 E-value=65 Score=32.86 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=28.4
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHH
Q 003098 505 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLL 554 (848)
Q Consensus 505 LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL 554 (848)
|.+|+..|....+.-.+++|-+++. ++|..|+.++|..++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 4556666666666666666665553 6666666666666666654
No 176
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=30.32 E-value=20 Score=29.64 Aligned_cols=9 Identities=44% Similarity=1.047 Sum_probs=7.1
Q ss_pred ccCcccccc
Q 003098 7 KDGHNWKKK 15 (848)
Q Consensus 7 ~~~~~~~~~ 15 (848)
.|||.|||=
T Consensus 2 ~DGy~WRKY 10 (59)
T smart00774 2 DDGYQWRKY 10 (59)
T ss_pred CCccccccc
Confidence 589999864
No 177
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=29.65 E-value=40 Score=35.31 Aligned_cols=49 Identities=22% Similarity=0.198 Sum_probs=38.1
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccccc
Q 003098 553 LLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 553 LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~ 607 (848)
|++.||--|. .|....||=++|...|+..+-+.|++.|+...+--..+.
T Consensus 1 lle~ga~wn~------id~~n~t~gd~a~ern~~rly~~lv~~gv~Selll~~l~ 49 (271)
T KOG1709|consen 1 LLEYGAGWNF------IDYENKTVGDLALERNQSRLYRRLVEAGVPSELLLFALG 49 (271)
T ss_pred CcccCCCccc------cChhhCCchHHHHHccHHHHHHHHHHcCCchhhhhhccc
Confidence 4567777777 678889999999999999999999998887655444443
No 178
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=29.55 E-value=61 Score=37.93 Aligned_cols=69 Identities=16% Similarity=0.252 Sum_probs=48.0
Q ss_pred CCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCC---------ce--eEEEEEeCCCCCcccc
Q 003098 310 EKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP---------GL--FLLYMSLDGHKPISQV 378 (848)
Q Consensus 310 gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~---------G~--Vpl~v~~~~~~~~Sev 378 (848)
.-+-+.+.|.+|.+ ++.+-||++++++.+=..-+|.|.+|+-.+ |+ ||+......+..-+--
T Consensus 506 d~amlel~g~nf~p-------~l~vwfg~~e~et~~r~~~sl~c~Vp~vs~f~~~w~~~~~P~~~~islvr~dg~vy~~~ 578 (622)
T KOG3743|consen 506 DVAMLELHGQNFVP-------NLQVWFGDVEAETYYRSGESLQCVVPDVSAFRQEWLWTRGPTFVPISLVRTDGTVYASG 578 (622)
T ss_pred ceeEEEecCCCCCC-------CceeeccccCchhhhcccceEEEEeCChhhcccchhcccCceeeeeeheeccceEEecc
Confidence 33567788999866 799999999999998777799999998732 22 5555544444333334
Q ss_pred cccccCC
Q 003098 379 LNFEYRS 385 (848)
Q Consensus 379 ~~Fey~~ 385 (848)
..|.|..
T Consensus 579 ~~fty~p 585 (622)
T KOG3743|consen 579 LTFTYTP 585 (622)
T ss_pred ceEEecc
Confidence 5566644
No 179
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=28.66 E-value=2.1e+02 Score=30.08 Aligned_cols=64 Identities=16% Similarity=0.203 Sum_probs=49.5
Q ss_pred CCCeEEEEECcCCCCccc--------CCCcceEEEcCCeecceeeeeCCeeeeecCCC-CCceeEEEEEeCCC
Q 003098 309 NEKTKILVTGFFHKDCLH--------LSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGH 372 (848)
Q Consensus 309 ~gg~kVlV~G~~~~~~~~--------~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-~~G~Vpl~v~~~~~ 372 (848)
.-|.=|+|.|.+|..... ..-.+.++.|+++.+|-.+++++=+.+.+|.. .+|.+.+.|...+.
T Consensus 3 APG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~ 75 (215)
T TIGR03437 3 APGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGG 75 (215)
T ss_pred CCCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCc
Confidence 346678888888864110 01246789999999999999999999999987 58999999987654
No 180
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=27.91 E-value=75 Score=23.44 Aligned_cols=17 Identities=53% Similarity=0.655 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 003098 700 AAARIQHRFRSWKVRKE 716 (848)
Q Consensus 700 aA~~IQa~~Rg~~~Rk~ 716 (848)
|+..||-+||.++.|+.
T Consensus 11 At~lI~dyfr~~K~rk~ 27 (35)
T PF08763_consen 11 ATLLIQDYFRQFKKRKE 27 (35)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67777777777777765
No 181
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility]
Probab=25.45 E-value=46 Score=42.72 Aligned_cols=82 Identities=18% Similarity=0.090 Sum_probs=64.2
Q ss_pred HHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 648 AARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK-------KMAAAARIQHRFRSWKVRKEFLNM 720 (848)
Q Consensus 648 ai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~-------~~~aA~~IQa~~Rg~~~Rk~~~~~ 720 (848)
+...|++++....++.+.++. .+.+.+| |+.+..++ ...+++-+|..|+.+..+..+...
T Consensus 922 ~~~k~~~~~~~~~~~~~~~~~-----------~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1062)
T KOG4229|consen 922 SFFKQKWFRLTLERKGLLRLS-----------EGSVLIQ--RLELLGRRTCPVAGAPAVAAASLQNAWPVYRELSGRLGL 988 (1062)
T ss_pred HHHHHHHHHhhhccccchhhc-----------chhHHHH--HHHHhcccCCcchhhhhhhhhhccccchhhhhhhhhHHH
Confidence 566788888888887776666 7777788 77766665 234788889899999998889888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHH
Q 003098 721 RRQAIKIQAAFRGFQVRKQYGK 742 (848)
Q Consensus 721 r~aai~IQa~~Rg~~~Rk~y~~ 742 (848)
+.+++.+|..+++...++.+-.
T Consensus 989 ~~s~~~~~~~~~~~~~~~~~~~ 1010 (1062)
T KOG4229|consen 989 RRSFIADQSPRSRPAYTMIFAA 1010 (1062)
T ss_pred hhhhcchhcccccchhhhhHHH
Confidence 9998999999888887776644
No 182
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=22.48 E-value=85 Score=32.69 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=35.6
Q ss_pred CCcceEEEcCCeeccee---eeeCCeeeeecCCCCCceeEEEEEeCCC
Q 003098 328 SKSNMFCVCGEVRVPAE---FVQAGVYRCFLPPHSPGLFLLYMSLDGH 372 (848)
Q Consensus 328 ~~~~~~c~FG~~~vpa~---~~~~gvl~C~~Pph~~G~Vpl~v~~~~~ 372 (848)
.-.++++.||++.+.-. .+.+|-|||.+-|+-+|...+.=...+.
T Consensus 7 ~~~~vsVsF~GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGK 54 (249)
T COG4674 7 YLDGVSVSFGGFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGK 54 (249)
T ss_pred EEeceEEEEcceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeeccc
Confidence 34578999999876555 3889999999999999998876555443
Done!