Query 003098
Match_columns 848
No_of_seqs 758 out of 3656
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 13:14:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003098.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003098hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 4.7E-23 1.6E-27 205.2 17.7 131 463-601 33-164 (169)
2 2cxk_A Camta1, calmodulin bind 99.9 1.4E-23 4.8E-28 187.5 8.8 88 293-386 4-91 (95)
3 4gpm_A Engineered protein OR26 99.9 3.8E-22 1.3E-26 198.6 15.4 130 467-604 4-134 (169)
4 1d9s_A Cyclin-dependent kinase 99.9 2.3E-21 7.8E-26 184.4 13.4 126 464-598 9-136 (136)
5 2jab_A H10-2-G3; HER2, darpin, 99.8 1.1E-20 3.9E-25 179.6 14.7 124 465-596 12-136 (136)
6 1bi7_B P16INK4A, MTS1, multipl 99.8 5.7E-21 2E-25 186.0 11.6 134 465-607 10-145 (156)
7 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.9E-20 1.3E-24 171.4 15.8 124 467-598 2-126 (126)
8 3v30_A DNA-binding protein rfx 99.8 7.7E-20 2.6E-24 180.2 16.9 132 465-604 34-166 (172)
9 3v31_A Ankyrin repeat family A 99.8 8.1E-20 2.8E-24 179.1 15.8 128 467-602 3-131 (167)
10 1ihb_A P18-INK4C(INK6), cyclin 99.8 5.9E-20 2E-24 178.8 14.2 125 465-598 36-162 (162)
11 4b93_B Ankyrin repeat domain-c 99.8 6.5E-20 2.2E-24 195.9 15.8 134 464-605 83-217 (269)
12 2y1l_E Darpin-8.4; hydrolase-i 99.8 2E-19 6.9E-24 177.2 17.7 124 465-596 45-169 (169)
13 3twr_A Tankyrase-2; ankyrin re 99.8 1.4E-19 4.7E-24 177.1 15.6 132 465-604 6-139 (165)
14 3f6q_A Integrin-linked protein 99.8 1.6E-19 5.5E-24 179.4 16.3 130 467-604 5-136 (179)
15 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.3E-19 4.3E-24 178.7 15.4 130 466-603 13-143 (169)
16 2rfm_A Putative ankyrin repeat 99.8 1E-19 3.6E-24 182.7 14.9 131 465-603 33-164 (192)
17 3v31_A Ankyrin repeat family A 99.8 2.9E-19 1E-23 175.2 17.4 128 464-599 33-161 (167)
18 2rfm_A Putative ankyrin repeat 99.8 3.3E-19 1.1E-23 179.1 17.9 140 449-596 50-190 (192)
19 1awc_B Protein (GA binding pro 99.8 1.5E-19 5E-24 175.1 14.7 123 469-600 4-127 (153)
20 1awc_B Protein (GA binding pro 99.8 7.2E-19 2.4E-23 170.2 17.9 120 465-592 32-152 (153)
21 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.7E-19 5.9E-24 159.9 12.2 93 500-598 1-93 (93)
22 3v30_A DNA-binding protein rfx 99.8 2.7E-19 9.1E-24 176.3 14.9 130 467-604 2-133 (172)
23 3twr_A Tankyrase-2; ankyrin re 99.8 1.7E-19 5.9E-24 176.4 13.4 123 466-597 41-164 (165)
24 3f6q_A Integrin-linked protein 99.8 2.2E-19 7.4E-24 178.6 13.7 131 464-602 36-167 (179)
25 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.4E-19 8.2E-24 174.5 13.4 125 466-599 4-129 (162)
26 1yyh_A HN1;, notch 1, ankyrin 99.8 1.5E-18 5E-23 182.5 19.7 122 466-595 123-245 (253)
27 2dfs_A Myosin-5A; myosin-V, in 99.8 3.7E-19 1.2E-23 221.4 17.3 142 643-831 766-915 (1080)
28 1bd8_A P19INK4D CDK4/6 inhibit 99.8 8E-19 2.7E-23 169.8 16.1 122 464-595 33-155 (156)
29 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2E-19 6.9E-24 187.9 12.1 131 466-604 36-170 (239)
30 2vge_A RELA-associated inhibit 99.8 2.1E-19 7.3E-24 187.2 12.1 131 466-604 20-154 (229)
31 1oy3_D Transcription factor in 99.8 7.9E-19 2.7E-23 185.7 16.2 110 493-608 150-260 (282)
32 3aji_A 26S proteasome non-ATPa 99.8 1.7E-18 5.8E-23 178.3 18.0 132 465-604 71-203 (231)
33 1yyh_A HN1;, notch 1, ankyrin 99.8 9.3E-19 3.2E-23 184.0 16.3 133 464-604 87-221 (253)
34 1s70_B 130 kDa myosin-binding 99.8 2.1E-18 7.2E-23 184.7 18.4 134 464-605 70-264 (299)
35 3c5r_A BARD-1, BRCA1-associate 99.8 1.5E-19 5E-24 171.7 8.2 125 465-597 8-133 (137)
36 3ehr_A Osteoclast-stimulating 99.8 1.8E-19 6.3E-24 185.4 9.5 132 465-604 71-204 (222)
37 2f8y_A Notch homolog 1, transl 99.8 3E-18 1E-22 175.4 18.2 127 465-599 90-217 (223)
38 2f8y_A Notch homolog 1, transl 99.8 2.8E-18 9.5E-23 175.7 17.8 134 465-606 56-191 (223)
39 3jxi_A Vanilloid receptor-rela 99.8 5.3E-19 1.8E-23 185.8 12.5 134 466-601 92-253 (260)
40 2dzn_A Probable 26S proteasome 99.8 2.5E-18 8.7E-23 176.4 16.8 133 465-605 70-207 (228)
41 2etb_A Transient receptor pote 99.8 7.5E-19 2.6E-23 184.5 12.7 128 465-600 88-248 (256)
42 2pnn_A Transient receptor pote 99.8 7.6E-19 2.6E-23 186.4 12.8 134 466-601 100-262 (273)
43 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.5E-18 5.3E-23 167.8 13.7 127 467-603 2-130 (156)
44 3aaa_C Myotrophin, protein V-1 99.8 1.8E-18 6.1E-23 161.2 13.5 109 466-582 6-115 (123)
45 4b93_B Ankyrin repeat domain-c 99.8 7.9E-19 2.7E-23 187.5 12.4 133 466-604 51-183 (269)
46 1ikn_D Protein (I-kappa-B-alph 99.8 2.9E-18 1E-22 177.7 16.1 143 450-600 57-211 (236)
47 3ljn_A Hypothetical protein; a 99.8 2.3E-18 7.7E-23 190.5 16.0 135 466-608 137-279 (364)
48 2rfa_A Transient receptor pote 99.8 4.7E-18 1.6E-22 175.3 17.3 132 464-603 34-188 (232)
49 2rfa_A Transient receptor pote 99.8 2.3E-18 8E-23 177.6 15.0 136 467-604 3-152 (232)
50 3c5r_A BARD-1, BRCA1-associate 99.8 1.8E-18 6.3E-23 164.1 12.9 108 491-605 1-108 (137)
51 3hra_A Ankyrin repeat family p 99.8 4.9E-18 1.7E-22 171.0 16.7 124 465-596 70-201 (201)
52 1ikn_D Protein (I-kappa-B-alph 99.8 2.1E-18 7.2E-23 178.8 14.3 133 465-605 43-183 (236)
53 3t8k_A Uncharacterized protein 99.8 7E-19 2.4E-23 177.7 10.3 132 466-603 37-184 (186)
54 1oy3_D Transcription factor in 99.8 3E-18 1E-22 181.2 15.7 132 465-604 43-223 (282)
55 1k1a_A B-cell lymphoma 3-encod 99.8 7.8E-18 2.7E-22 174.0 18.3 133 464-604 76-214 (241)
56 2etb_A Transient receptor pote 99.8 3E-18 1E-22 179.8 15.4 129 464-600 40-208 (256)
57 3b7b_A Euchromatic histone-lys 99.8 8E-18 2.7E-22 173.9 17.8 146 451-604 57-208 (237)
58 3hra_A Ankyrin repeat family p 99.8 9.6E-18 3.3E-22 168.8 17.7 132 465-604 37-176 (201)
59 2xai_A ASB-9, ankyrin repeat a 99.8 4.6E-18 1.6E-22 179.7 15.9 128 464-600 33-161 (261)
60 3deo_A Signal recognition part 99.8 5.6E-19 1.9E-23 176.7 8.4 126 466-599 43-169 (183)
61 1dcq_A PYK2-associated protein 99.8 4.7E-18 1.6E-22 182.5 16.0 126 467-599 130-264 (278)
62 3ui2_A Signal recognition part 99.8 1.7E-18 5.9E-23 181.8 12.3 126 466-599 44-186 (244)
63 3aji_A 26S proteasome non-ATPa 99.8 5.7E-18 2E-22 174.3 16.0 132 465-604 38-170 (231)
64 3utm_A Tankyrase-1; tankyrase, 99.8 1.4E-17 4.9E-22 181.2 19.6 96 465-562 56-152 (351)
65 1wdy_A 2-5A-dependent ribonucl 99.8 1.4E-17 4.9E-22 175.6 18.2 131 466-604 147-284 (285)
66 3lvq_E ARF-GAP with SH3 domain 99.8 2.7E-18 9.1E-23 199.3 13.7 130 469-605 134-272 (497)
67 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.4E-18 4.9E-23 181.4 10.3 130 466-604 4-134 (239)
68 1n11_A Ankyrin; clathrin, BAND 99.7 9.5E-18 3.3E-22 190.0 17.1 132 465-604 243-375 (437)
69 2xai_A ASB-9, ankyrin repeat a 99.7 1.6E-17 5.5E-22 175.5 17.3 133 464-606 66-199 (261)
70 1s70_B 130 kDa myosin-binding 99.7 8.1E-18 2.8E-22 180.1 15.2 137 466-604 39-230 (299)
71 4hbd_A KN motif and ankyrin re 99.7 6.8E-18 2.3E-22 180.5 14.3 100 491-596 173-273 (276)
72 2b0o_E UPLC1; arfgap, structur 99.7 7.9E-18 2.7E-22 182.8 14.7 126 467-599 151-285 (301)
73 3b7b_A Euchromatic histone-lys 99.7 2.8E-17 9.4E-22 169.9 18.0 132 465-604 42-175 (237)
74 1d9s_A Cyclin-dependent kinase 99.7 2.5E-18 8.5E-23 163.3 9.3 107 491-604 2-109 (136)
75 4g8k_A 2-5A-dependent ribonucl 99.7 1.1E-17 3.8E-22 183.0 15.3 128 464-602 199-330 (337)
76 3utm_A Tankyrase-1; tankyrase, 99.7 1.1E-17 3.8E-22 182.1 15.3 132 466-604 23-155 (351)
77 1sw6_A Regulatory protein SWI6 99.7 7.7E-18 2.6E-22 184.6 13.8 154 450-605 109-315 (327)
78 4hbd_A KN motif and ankyrin re 99.7 7.6E-18 2.6E-22 180.2 13.4 133 464-604 108-248 (276)
79 3d9h_A CDNA FLJ77766, highly s 99.7 2.5E-17 8.7E-22 176.7 16.9 126 466-600 91-217 (285)
80 3jxi_A Vanilloid receptor-rela 99.7 1.1E-17 3.9E-22 175.6 13.8 128 465-600 44-212 (260)
81 2dzn_A Probable 26S proteasome 99.7 3.3E-17 1.1E-21 168.1 16.8 133 464-604 33-172 (228)
82 3kea_A K1L; tropism, ANK repea 99.7 7.7E-18 2.6E-22 180.8 12.6 127 467-602 62-190 (285)
83 3ljn_A Hypothetical protein; a 99.7 1.7E-17 6E-22 183.4 15.3 148 449-604 64-242 (364)
84 2l6b_A NR1C; ankyrin, consensu 99.7 3.7E-18 1.3E-22 156.9 8.2 105 496-606 4-108 (115)
85 2pnn_A Transient receptor pote 99.7 1.2E-17 4.2E-22 177.1 13.3 129 465-601 52-221 (273)
86 1k1a_A B-cell lymphoma 3-encod 99.7 5.1E-17 1.7E-21 167.9 17.2 132 465-604 44-181 (241)
87 3d9h_A CDNA FLJ77766, highly s 99.7 3.9E-17 1.4E-21 175.2 16.5 146 450-605 104-254 (285)
88 3aaa_C Myotrophin, protein V-1 99.7 1.6E-17 5.4E-22 154.7 11.4 101 498-604 4-104 (123)
89 3jue_A Arfgap with coiled-coil 99.7 2.3E-17 7.7E-22 184.3 14.2 126 467-599 199-327 (368)
90 3kea_A K1L; tropism, ANK repea 99.7 1.8E-17 6.1E-22 178.0 12.1 129 466-603 94-225 (285)
91 3t8k_A Uncharacterized protein 99.7 3.6E-18 1.2E-22 172.5 5.9 129 467-604 6-152 (186)
92 2fo1_E LIN-12 protein; beta-ba 99.7 9.5E-17 3.3E-21 179.0 17.7 129 464-599 232-372 (373)
93 1wdy_A 2-5A-dependent ribonucl 99.7 1.5E-16 5.2E-21 167.6 18.2 136 466-603 38-179 (285)
94 4g8k_A 2-5A-dependent ribonucl 99.7 5.5E-17 1.9E-21 177.5 14.7 130 466-603 167-303 (337)
95 3eu9_A Huntingtin-interacting 99.7 1.2E-16 4.3E-21 164.1 15.5 128 466-601 108-238 (240)
96 1n11_A Ankyrin; clathrin, BAND 99.7 1.9E-16 6.5E-21 179.3 17.3 131 465-603 78-209 (437)
97 3eu9_A Huntingtin-interacting 99.7 2.5E-16 8.4E-21 161.9 16.2 130 466-603 8-139 (240)
98 2fo1_E LIN-12 protein; beta-ba 99.7 1E-16 3.5E-21 178.8 14.1 133 464-604 196-344 (373)
99 2jab_A H10-2-G3; HER2, darpin, 99.7 7.7E-17 2.6E-21 153.0 10.7 102 497-604 10-111 (136)
100 2zgd_A 3 repeat synthetic anky 99.7 1.3E-16 4.5E-21 146.2 10.5 93 494-592 17-109 (110)
101 2vge_A RELA-associated inhibit 99.7 1.1E-16 3.8E-21 166.6 11.1 109 489-603 6-117 (229)
102 3ehr_A Osteoclast-stimulating 99.7 1.1E-16 3.7E-21 164.6 9.6 103 497-605 69-172 (222)
103 1n0r_A 4ANK, 4 ankyrin repeats 99.7 3.6E-16 1.2E-20 144.5 12.2 98 500-603 1-98 (126)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.7 4.6E-16 1.6E-20 137.7 11.6 91 467-559 2-93 (93)
105 1bi7_B P16INK4A, MTS1, multipl 99.6 1.5E-16 5E-21 154.7 8.5 103 495-604 6-109 (156)
106 3deo_A Signal recognition part 99.6 1.6E-16 5.6E-21 158.7 8.7 101 497-604 40-141 (183)
107 3ui2_A Signal recognition part 99.6 3.4E-16 1.2E-20 164.2 8.2 101 497-604 41-142 (244)
108 2l6b_A NR1C; ankyrin, consensu 99.6 6.6E-16 2.3E-20 141.8 7.9 105 465-577 7-112 (115)
109 2dfs_A Myosin-5A; myosin-V, in 99.6 6E-15 2E-19 183.7 18.7 123 640-772 786-914 (1080)
110 1sw6_A Regulatory protein SWI6 99.6 3.9E-16 1.3E-20 171.0 6.7 120 473-599 102-231 (327)
111 2b0o_E UPLC1; arfgap, structur 99.5 8.2E-15 2.8E-19 159.0 9.9 109 464-586 187-299 (301)
112 2aja_A Ankyrin repeat family p 99.5 4.4E-15 1.5E-19 166.3 0.4 125 467-598 92-224 (376)
113 3jue_A Arfgap with coiled-coil 99.5 9E-14 3.1E-18 155.1 10.3 101 498-604 196-299 (368)
114 2aja_A Ankyrin repeat family p 99.4 5.8E-15 2E-19 165.3 -1.0 143 448-606 102-258 (376)
115 3lvq_E ARF-GAP with SH3 domain 99.4 2.7E-13 9.3E-18 157.1 12.8 97 464-562 168-268 (497)
116 1dcq_A PYK2-associated protein 99.4 3.2E-13 1.1E-17 144.8 11.7 96 465-562 167-266 (278)
117 2zgd_A 3 repeat synthetic anky 99.4 4.1E-13 1.4E-17 122.7 10.1 87 465-553 22-109 (110)
118 3muj_A Transcription factor CO 98.9 2.6E-09 8.8E-14 99.0 8.2 84 295-385 5-90 (138)
119 2ix7_C Myosin-5A; contractIle 98.8 8.3E-09 2.9E-13 83.5 8.5 49 697-745 4-52 (58)
120 1n2d_C IQ2 and IQ3 motifs from 98.6 4.9E-08 1.7E-12 75.7 6.9 42 699-740 4-47 (48)
121 3mlp_A Transcription factor CO 98.6 2.1E-07 7.2E-12 97.9 10.7 84 295-385 231-316 (402)
122 2ix7_C Myosin-5A; contractIle 98.5 4.3E-07 1.5E-11 73.4 8.2 49 720-769 4-52 (58)
123 1n2d_C IQ2 and IQ3 motifs from 98.3 8.7E-07 3E-11 68.6 6.4 42 720-761 2-45 (48)
124 1uad_C RSEC5, exocyst complex 98.0 2E-05 6.8E-10 70.8 8.3 84 295-386 7-95 (99)
125 3tc9_A Hypothetical hydrolase; 97.7 7.2E-05 2.5E-09 84.7 9.2 89 292-386 14-106 (430)
126 3kya_A Putative phosphatase; s 97.5 0.00011 3.9E-09 84.3 7.9 88 292-386 14-104 (496)
127 2uzx_B Hepatocyte growth facto 97.5 8.8E-05 3E-09 89.3 6.7 94 295-388 541-638 (727)
128 3hrp_A Uncharacterized protein 97.3 0.00042 1.4E-08 77.8 8.7 88 292-386 14-105 (409)
129 4hw6_A Hypothetical protein, I 97.2 0.00075 2.6E-08 76.4 9.8 89 292-386 16-108 (433)
130 2uzx_B Hepatocyte growth facto 97.1 7E-05 2.4E-09 90.2 0.0 73 295-372 635-708 (727)
131 2yrp_A Nuclear factor of activ 97.0 0.0015 5.1E-08 59.4 7.9 87 291-385 4-108 (114)
132 1i84_S Smooth muscle myosin he 97.0 0.0049 1.7E-07 78.3 15.5 47 643-697 790-836 (1184)
133 1wdc_A Scallop myosin; calcium 96.9 0.0022 7.5E-08 52.5 7.5 42 699-740 7-51 (64)
134 2bl0_A Major plasmodial myosin 96.9 0.0016 5.6E-08 53.1 6.2 42 699-740 5-49 (63)
135 1kk8_A Myosin heavy chain, str 96.9 0.0012 4E-08 80.3 7.7 46 697-742 778-826 (837)
136 2bl0_A Major plasmodial myosin 96.7 0.0028 9.6E-08 51.7 6.0 45 644-696 3-47 (63)
137 1wdc_A Scallop myosin; calcium 96.6 0.0051 1.7E-07 50.3 7.5 40 720-759 5-47 (64)
138 1i84_S Smooth muscle myosin he 96.6 0.016 5.5E-07 73.6 15.6 44 698-741 792-838 (1184)
139 1kk8_A Myosin heavy chain, str 95.9 0.014 4.7E-07 71.0 8.7 43 718-760 776-821 (837)
140 1ikn_C P50D, protein (NF-kappa 95.6 0.036 1.2E-06 50.8 8.3 85 296-386 4-106 (119)
141 1my7_A NF-kappab P65 (RELA) su 95.0 0.044 1.5E-06 49.8 6.6 88 296-385 4-100 (114)
142 1u36_A DNA-binding, nuclear fa 94.9 0.052 1.8E-06 48.8 7.0 84 296-385 4-105 (106)
143 1oy3_C Transcription factor P6 94.1 0.089 3.1E-06 49.0 6.6 83 296-385 4-100 (136)
144 1zk9_A Transcription factor RE 93.9 0.023 7.7E-07 51.3 2.3 89 295-385 12-109 (110)
145 2l53_B CAM, voltage-gated sodi 92.4 0.11 3.8E-06 35.8 3.3 19 678-696 5-23 (31)
146 2kxw_B Sodium channel protein 92.3 0.084 2.9E-06 35.3 2.6 17 679-695 6-22 (27)
147 3gn4_A Myosin-VI; unconvention 91.8 0.62 2.1E-05 44.1 8.9 28 720-747 44-71 (148)
148 2v2t_A RELB, transcription fac 91.7 0.34 1.2E-05 51.1 7.8 85 295-385 190-287 (288)
149 1nfk_A Protein (nuclear factor 91.6 0.45 1.6E-05 50.9 8.7 86 295-386 209-312 (325)
150 1a3q_A Protein (nuclear factor 91.3 0.4 1.4E-05 50.5 7.7 83 296-384 186-284 (285)
151 1ikn_A P65, protein (NF-kappa- 90.7 0.4 1.4E-05 50.5 7.1 86 295-386 175-273 (286)
152 1p7h_L Nuclear factor of activ 90.0 0.47 1.6E-05 49.9 6.9 88 294-385 184-285 (286)
153 2o61_A Transcription factor P6 89.9 0.34 1.2E-05 55.3 6.2 85 296-386 177-274 (540)
154 3iag_C Recombining binding pro 89.5 0.49 1.7E-05 51.5 6.7 81 296-385 328-420 (422)
155 1svc_P Protein (nuclear factor 89.5 0.56 1.9E-05 50.8 7.1 85 295-385 249-351 (365)
156 2l53_B CAM, voltage-gated sodi 89.5 0.26 8.8E-06 34.0 2.9 20 644-663 5-24 (31)
157 2kxw_B Sodium channel protein 88.7 0.3 1E-05 32.6 2.7 20 643-662 4-23 (27)
158 1imh_C NF-AT5, tonebp, nuclear 88.1 0.8 2.7E-05 48.1 7.0 88 294-385 180-280 (281)
159 1gji_A C-REL protein, C-REL pr 87.4 0.63 2.1E-05 48.7 5.7 86 294-385 177-274 (275)
160 4anj_A Unconventional myosin-V 85.3 1.3 4.3E-05 55.2 7.8 43 699-742 776-818 (1052)
161 3gn4_A Myosin-VI; unconvention 85.1 2.7 9.3E-05 39.7 8.1 66 653-731 13-78 (148)
162 3orj_A Sugar-binding protein; 84.4 1.8 6E-05 47.7 7.5 78 294-385 112-196 (439)
163 1w7j_A Myosin VA; motor protei 76.1 2.2 7.5E-05 51.5 5.3 30 718-747 765-794 (795)
164 1w7j_A Myosin VA; motor protei 74.6 2.1 7.1E-05 51.8 4.5 28 697-724 767-794 (795)
165 4anj_A Unconventional myosin-V 74.4 3.8 0.00013 50.9 6.9 37 645-693 775-811 (1052)
166 2d9z_A Protein kinase C, NU ty 68.2 2.6 8.7E-05 38.9 2.5 30 37-68 11-40 (129)
167 4dck_A Sodium channel protein 63.0 7.1 0.00024 37.8 4.7 15 680-694 131-145 (168)
168 3brd_A LIN-12 and GLP-1 phenot 55.5 17 0.00058 40.5 6.5 83 295-385 375-474 (477)
169 3oky_A Plexin-A2; transmembran 52.3 24 0.00083 41.8 7.8 71 294-370 527-609 (681)
170 4dck_A Sodium channel protein 51.2 14 0.00049 35.7 4.6 23 697-719 129-151 (168)
171 3orj_A Sugar-binding protein; 42.8 37 0.0013 37.4 6.7 69 307-385 34-111 (439)
172 2coa_A Protein kinase C, D2 ty 36.1 28 0.00094 32.0 3.7 31 36-68 10-40 (125)
173 2ycu_A Non muscle myosin 2C, a 31.7 59 0.002 40.3 6.9 45 700-744 766-810 (995)
174 1wj2_A Probable WRKY transcrip 31.0 13 0.00046 31.2 0.7 9 7-15 18-26 (78)
175 2ayd_A WRKY transcription fact 29.4 13 0.00046 31.0 0.4 8 7-14 15-22 (76)
176 2ycu_A Non muscle myosin 2C, a 21.5 3.6E+02 0.012 33.3 11.2 20 700-719 789-808 (995)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=4.7e-23 Score=205.20 Aligned_cols=131 Identities=22% Similarity=0.313 Sum_probs=115.6
Q ss_pred CcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHH
Q 003098 463 SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 463 ~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
....+.++++.++..+... ++..|++ |++++..|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|
T Consensus 33 ~d~~g~t~l~~a~~~~~~~--~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A 110 (169)
T 4gpm_A 33 SDSDGRTPLHHAAENGHKE--VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA 110 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHH--HHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHH
Confidence 3456788999998888765 4444444 999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcc
Q 003098 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l 601 (848)
+..|+.++|++|++.|++++. +|..|.|||++|+..|+.+++++|+++||+..-
T Consensus 111 ~~~g~~~~v~~Ll~~gad~~~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 111 AENGHKEVVKLLISKGADVNT------SDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHcCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 999999999999999999998 889999999999999999999999999998743
No 2
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.89 E-value=1.4e-23 Score=187.54 Aligned_cols=88 Identities=34% Similarity=0.696 Sum_probs=81.7
Q ss_pred CCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCCceeEEEEEeCCC
Q 003098 293 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGH 372 (848)
Q Consensus 293 ~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v~~~~~ 372 (848)
..++.|+||+|+|||.+|||||+|+|.|+.. ..+|.|+||+++||++++++|+|+|++|||.+|.|||+|++++.
T Consensus 4 ~~~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-----gs~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~ 78 (95)
T 2cxk_A 4 GSSGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQ 78 (95)
T ss_dssp -CCSCCCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTE
T ss_pred CCcEEEEEECCCcccCCCCEEEEEEeECCCC-----CccEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCe
Confidence 4578899999999999999999999999976 56899999999999999999999999999999999999999987
Q ss_pred CCcccccccccCCC
Q 003098 373 KPISQVLNFEYRSP 386 (848)
Q Consensus 373 ~~~Sev~~Fey~~~ 386 (848)
. +|+.++|||+..
T Consensus 79 ~-~s~~~~FeY~~~ 91 (95)
T 2cxk_A 79 I-ISNSVVFEYKSG 91 (95)
T ss_dssp E-CSCCEEEEECCC
T ss_pred e-cCCceEEEEeCC
Confidence 5 699999999973
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=3.8e-22 Score=198.60 Aligned_cols=130 Identities=22% Similarity=0.300 Sum_probs=120.5
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
...+|+.||..|+.. +++.|++ |+++|..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 4 lg~~L~~Aa~~G~~~--~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 4 LGKRLIEAAENGNKD--RVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcC
Confidence 345799999999887 5555555 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 546 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 546 ~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
+.++|++|+++|+++|. +|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 82 ~~~~v~~Ll~~gadvn~------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 134 (169)
T 4gpm_A 82 HKEVVKLLISKGADVNA------KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDS 134 (169)
T ss_dssp CHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHHHCcCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 99999999999999998 889999999999999999999999999999876654
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=2.3e-21 Score=184.39 Aligned_cols=126 Identities=19% Similarity=0.219 Sum_probs=116.8
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCC-CCcHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWA 541 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~-G~TpLh~A 541 (848)
...+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+. |+.+++++|+++|++++.+|.. |+||||+|
T Consensus 9 ~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 85 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVE--TVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDA 85 (136)
T ss_dssp CCCCSCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHH
T ss_pred CCCCccHHHHHHHcCCHH--HHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHH
Confidence 345788999999998866 5555555 99999999999999999999 9999999999999999999999 99999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhh
Q 003098 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~ 598 (848)
+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 86 AREGFLDTLVVLHRAGARLDV------CDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHTCHHHHHHHHHTCCCCCC------CSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999998 889999999999999999999999999985
No 5
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=1.1e-20 Score=179.55 Aligned_cols=124 Identities=23% Similarity=0.284 Sum_probs=115.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDD--EVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp CHHHHHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHH--HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 45678899999999877 5555555 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
.|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNA------QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcC------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999988 8899999999999999999999999876
No 6
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=5.7e-21 Score=185.99 Aligned_cols=134 Identities=19% Similarity=0.217 Sum_probs=115.2
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCc-HHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT-ALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~T-pLh~Aa 542 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+ .|+.+++++|++.|++++.+|..|+| |||+|+
T Consensus 10 ~~~~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 10 EPSADWLATAAARGRVE--EVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp CCSTTHHHHHHHHTCHH--HHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHH
T ss_pred ccchHHHHHHHHcCCHH--HHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 45778999999999876 5666666 9999999999999999985 89999999999999999999999999 999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 607 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~ 607 (848)
..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+....
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 145 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARI 145 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------
T ss_pred HCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcC
Confidence 99999999999999999998 889999999999999999999999999999887765443
No 7
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.9e-20 Score=171.35 Aligned_cols=124 Identities=26% Similarity=0.356 Sum_probs=116.1
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~--~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLE--VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHH--HHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHH--HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 678999999998876 5555555 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhh
Q 003098 546 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 546 ~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~ 598 (848)
+.+++++|++.|++++. +|..|.|||++|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNA------KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999988 889999999999999999999999999985
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.83 E-value=7.7e-20 Score=180.18 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=120.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 34 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 111 (172)
T 3v30_A 34 ERGFTPLIWASAFGEIE--TVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVR 111 (172)
T ss_dssp TTSCCHHHHHHHTTCHH--HHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 45778999999888876 5555555 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++....+.
T Consensus 112 ~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~ 166 (172)
T 3v30_A 112 GNHVKCVEALLARGADLTT------EADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNL 166 (172)
T ss_dssp TTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC--
T ss_pred cCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999998 889999999999999999999999999998766554
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=8.1e-20 Score=179.14 Aligned_cols=128 Identities=18% Similarity=0.104 Sum_probs=82.5
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
+.++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|
T Consensus 3 ~~t~L~~A~~~g~~~--~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 3 NSLSVHQLAAQGEML--YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TCCCHHHHHHTTCHH--HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CcchHHHHHHCCCHH--HHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 445666666666554 3333333 6666666666666666666666666666666666666666666666666666666
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 546 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 546 ~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 81 ~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNE------YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp CHHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHCCCCCCc------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 66666666666666665 5566666666666666666666666666665443
No 10
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=5.9e-20 Score=178.80 Aligned_cols=125 Identities=21% Similarity=0.216 Sum_probs=110.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.++. ++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 36 ~~g~t~L~~A~~-~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 112 (162)
T 1ihb_A 36 GFGRTALQVMKL-GNPE--IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAK 112 (162)
T ss_dssp TTSCCHHHHCCS-SCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccCccHHHHHHc-CcHH--HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 346677877666 6554 5555555 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCC-CCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhh
Q 003098 544 YGREKMVVDLLSAGAK-PNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~-in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~ 598 (848)
.|+.+++++|++.|++ ++. +|..|.||||+|+..|+.+++++|+++||+
T Consensus 113 ~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 113 EGHLRVVEFLVKHTASNVGH------RNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTCHHHHHHHHHHSCCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cCCHHHHHHHHHccCCCCCC------cCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999998 466 789999999999999999999999999985
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.82 E-value=6.5e-20 Score=195.88 Aligned_cols=134 Identities=19% Similarity=0.156 Sum_probs=124.3
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.+||+.|+..++.. +++.|+. |++++..+..|.||||+|+..++.+++++|++.|+++|.+|..|+||||+||
T Consensus 83 d~~G~TpLh~A~~~g~~~--~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~ 160 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRAD--LIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYAC 160 (269)
T ss_dssp CTTSCCHHHHHHHTTCTT--HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHH--HHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 456789999999999876 5566665 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 161 ~~g~~~~v~~Ll~~gadvn~------~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 217 (269)
T 4b93_B 161 SGGHHELVALLLQHGASINA------SNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKR 217 (269)
T ss_dssp HTTCGGGHHHHHHTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred HCCCHHHHHHHHHCCCCCCc------cccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 99999999999999999998 8899999999999999999999999999998877653
No 12
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.82 E-value=2e-19 Score=177.23 Aligned_cols=124 Identities=26% Similarity=0.358 Sum_probs=100.8
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 45 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 122 (169)
T 2y1l_E 45 ASGWTPLHLAAFNGHLE--IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM 122 (169)
T ss_dssp TTSCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 34667788888777765 4454544 88888888888888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
.|+.+++++|+++|++++. +|..|.|||++|+..|+.+++++|++.|
T Consensus 123 ~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 123 FGHLEIVEVLLKNGADVNA------QDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 8888888888888888877 7788888888888888888888888765
No 13
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.82 E-value=1.4e-19 Score=177.14 Aligned_cols=132 Identities=17% Similarity=0.198 Sum_probs=107.3
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~--Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
..+.++++.++..++.. +++.|++ +.+++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 6 ~~~~~~l~~A~~~g~~~--~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVE--TVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp CHHHHHHHHHHHHTCHH--HHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred chhhHHHHHHHHhCCHH--HHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 34667788888888776 4555554 5566777888888888888888888888888888888888888888888888
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNV------ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcCcHHHHHHHHhCCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 88888888888888888887 778888888888888888888888888888766554
No 14
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.82 E-value=1.6e-19 Score=179.45 Aligned_cols=130 Identities=20% Similarity=0.176 Sum_probs=87.5
Q ss_pred ccchHHHHHHcCCcHHHHHHHHH-c-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 467 AKDSFFELTLKSKLKEWLLERVV-E-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~-~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
..++++.++..++.. +++.|+ . +.+++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 5 ~~~~l~~A~~~g~~~--~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 5 FMDDIFTQCREGNAV--AVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp --CCHHHHHHHTCHH--HHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHcCCHH--HHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 445667776666665 333333 3 556666777777777777777777777777777777777777777777777777
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 136 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINA------VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNK 136 (179)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCT
T ss_pred CCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhcc
Confidence 777777777777777666 666777777777777777777777777766655443
No 15
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.82 E-value=1.3e-19 Score=178.68 Aligned_cols=130 Identities=21% Similarity=0.256 Sum_probs=119.6
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
...++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..
T Consensus 13 ~~~~~l~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDD--EVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp CHHHHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccchHHHHHHcCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 3556889999998877 5555555 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+
T Consensus 91 ~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 143 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNA------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD 143 (169)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 999999999999999998 88999999999999999999999999999876554
No 16
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.81 E-value=1e-19 Score=182.75 Aligned_cols=131 Identities=21% Similarity=0.197 Sum_probs=108.8
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 33 ~~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMEN--AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSII 110 (192)
T ss_dssp TTCCCHHHHHHHHTCGG--GHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 34678888888888765 4444444 88888888888888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
.|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+
T Consensus 111 ~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 111 FGYSEMSYFLLEHGANVND------RNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp HTCHHHHHHHHHTTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred cCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 8888888888888888887 77888888888888888888888888888776554
No 17
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=2.9e-19 Score=175.16 Aligned_cols=128 Identities=20% Similarity=0.281 Sum_probs=118.6
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 33 ~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 110 (167)
T 3v31_A 33 DEEGFTPLMWAAAHGQIA--VVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAV 110 (167)
T ss_dssp CTTSCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHH--HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHH
Confidence 345778999999988865 5555555 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
..|+.+++++|+++|++++. +|..|.|||++|+..|+.+++++|++++++.
T Consensus 111 ~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 111 HGNHVKCVKMLLESGADPTI------ETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999999999999988 8899999999999999999999999998764
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.81 E-value=3.3e-19 Score=179.09 Aligned_cols=140 Identities=21% Similarity=0.276 Sum_probs=123.2
Q ss_pred CHHHHHHHhCCCCCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCC
Q 003098 449 SWAYLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSL 527 (848)
Q Consensus 449 ~~~~li~~l~~~~~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~i 527 (848)
....+++...+.......+.++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|+++
T Consensus 50 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 127 (192)
T 2rfm_A 50 AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLG--IAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV 127 (192)
T ss_dssp GHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHH--HHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHhccccccccccCccHHHHHHHcCCHH--HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 334455544443444456889999999988776 5555555 9999999999999999999999999999999999999
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 528 DFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 528 n~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
+.+|..|.||||+|+..|+.+++++|+++|++++. +|..|.|||++|+..|+.+++++|++.|
T Consensus 128 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 128 NDRNLEGETPLIVASKYGRSEIVKKLLELGADISA------RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999999999999998 8899999999999999999999999986
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.81 E-value=1.5e-19 Score=175.05 Aligned_cols=123 Identities=24% Similarity=0.245 Sum_probs=63.6
Q ss_pred chHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCH
Q 003098 469 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 547 (848)
Q Consensus 469 ~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~ 547 (848)
++|+.|+..++.. +++.|++ |++++ .|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 4 ~~L~~A~~~g~~~--~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 4 KKLLEAARAGQDD--EVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHTCHH--HHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHHHHcCCHH--HHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 3455555555443 2222322 44443 344555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003098 548 KMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 548 eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 600 (848)
+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 81 ~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 127 (153)
T 1awc_B 81 NIVEVLLKHGADVNA------KDMLKMTALHWATEHNHQEVVELLIKYGADVH 127 (153)
T ss_dssp HHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 555555555555554 44555555555555555555555555555443
No 20
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.80 E-value=7.2e-19 Score=170.18 Aligned_cols=120 Identities=21% Similarity=0.218 Sum_probs=112.5
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 32 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 32 WLGTSPLHLAAQYGHFS--TTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp TTCCCHHHHHHHHTCHH--HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 45778999999999876 5666666 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHH
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFL 592 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lL 592 (848)
.|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|
T Consensus 110 ~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 110 HNHQEVVELLIKYGADVHT------QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999998 889999999999999999999987
No 21
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=1.7e-19 Score=159.94 Aligned_cols=93 Identities=30% Similarity=0.380 Sum_probs=88.9
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 003098 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADI 579 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~l 579 (848)
+|+||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++. +|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999998 88999999999
Q ss_pred HHHcCChHHHHHHHhhhhh
Q 003098 580 ASKKGFDGLAAFLSEQALV 598 (848)
Q Consensus 580 A~~~G~~~iv~lLle~Ga~ 598 (848)
|+..|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999974
No 22
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.80 E-value=2.7e-19 Score=176.33 Aligned_cols=130 Identities=16% Similarity=0.068 Sum_probs=116.8
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCC-CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSK-TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~-in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
..++++.++..+++. +++.++. +.+ ++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~--~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELD--QLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHH--HHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHH--HHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC
Confidence 357899999999887 4444444 665 788999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 80 ~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 80 GYTDIVGLLLERDVDINI------YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp TCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 999999999999999998 889999999999999999999999999988765543
No 23
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=1.7e-19 Score=176.45 Aligned_cols=123 Identities=21% Similarity=0.266 Sum_probs=112.5
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++++.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 41 ~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 41 RQSTPLHFAAGYNRVS--VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp TCCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcChHH--HHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc
Confidence 4568999999888866 5555555 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhh
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQAL 597 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga 597 (848)
|+.+++++|+++|++++. +|..|.||||+|+. |+.+++++|+++|+
T Consensus 119 ~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 119 GKYEICKLLLQHGADPTK------KNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCHHHHHHHHHcCCCCcc------cCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999998 88999999999877 99999999999986
No 24
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.80 E-value=2.2e-19 Score=178.55 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=120.6
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 36 ~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 113 (179)
T 3f6q_A 36 DDHGFSPLHWACREGRSA--VVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYAC 113 (179)
T ss_dssp CTTSCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHH--HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 345778999999888776 5555555 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
..|+.+++++|+++|++++. +|..|.|||++|+..++.+++++|++.|++.+..
T Consensus 114 ~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 114 FWGQDQVAEDLVANGALVSI------CNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI 167 (179)
T ss_dssp HTTCHHHHHHHHHTTCCSSB------CCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCB
T ss_pred HcCCHHHHHHHHHCCCCcch------hccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccC
Confidence 99999999999999999998 8899999999999999999999999999887543
No 25
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.80 E-value=2.4e-19 Score=174.45 Aligned_cols=125 Identities=18% Similarity=0.248 Sum_probs=115.9
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
...++|+.|+..++.. +++.|++ |++++..|..|.||||+|+. |+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLE--QLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHH--HHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHH--HHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 3567899999999877 5666666 99999999999999999999 999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.
T Consensus 81 ~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNI------EDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 999999999999999998 8899999999999999999999999999873
No 26
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.80 E-value=1.5e-18 Score=182.48 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=70.5
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++++.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 123 ~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 123 DGTTPLILAARLAVEG--MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp TCCCHHHHHHHHTCSS--HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCcHHHHHHHcChHH--HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC
Confidence 3455555555555443 3333333 566666666666666666666666666666666666666666666666666666
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 595 (848)
|+.+++++|+++|++++. +|..|.|||++|+..|+.+|+++|...
T Consensus 201 ~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 201 GSYETAKVLLDHFANRDI------TDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCccc------cccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 666666666666666555 555666666666666666666665543
No 27
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.79 E-value=3.7e-19 Score=221.39 Aligned_cols=142 Identities=29% Similarity=0.428 Sum_probs=121.3
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHHH------HHHHHHHHHHHHHHHHHH
Q 003098 643 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKM------AAAARIQHRFRSWKVRKE 716 (848)
Q Consensus 643 ~~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~------~aA~~IQa~~Rg~~~Rk~ 716 (848)
....+|+.||++||||++|++|++++ .|++.||++||++++|+.+ .||+.||++||||+.|+.
T Consensus 766 ~l~~aa~~IQa~~Rg~l~Rk~~~~~r-----------~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~ 834 (1080)
T 2dfs_A 766 KLRAACIRIQKTIRGWLMRKKYMRMR-----------RAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKR 834 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhH-----------HHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHH
Confidence 35679999999999999999998877 8999999999999998754 499999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCCCCCchhHHHHHHHH
Q 003098 717 FLNMRRQAIKIQAAFRGFQVRKQYGKILW--SVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEEDFYRAS 794 (848)
Q Consensus 717 ~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~--aa~~IQ~~~R~~r~~r~~~r~lr~~~~~~~~~~~q~qa~~~~~~~~~~~ 794 (848)
|..++.+++.||++|||+.+|+.|+.++. +++.||+.||+|+. |+.+
T Consensus 835 y~~lr~aai~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~-R~~y------------------------------ 883 (1080)
T 2dfs_A 835 YQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLA-RVHY------------------------------ 883 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHH-HHHT------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH------------------------------
Confidence 99999999999999999999999988775 89999999999933 3332
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 003098 795 RKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQ 831 (848)
Q Consensus 795 R~q~~~~~~~A~irIQs~~R~~~aRr~~~~lk~~~~q 831 (848)
.+..+|++.||++||++.+|+++++++.+++.
T Consensus 884 -----~~~~~aai~iQs~~R~~laRr~~~~Lk~ear~ 915 (1080)
T 2dfs_A 884 -----HRTLKAIVYLQCCYRRMMAKRELKKLKIEARS 915 (1080)
T ss_dssp -----TTTHHHHHHHHHHHHHHHHHHHTTTC------
T ss_pred -----HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12347999999999999999999999887753
No 28
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=8e-19 Score=169.83 Aligned_cols=122 Identities=17% Similarity=0.236 Sum_probs=107.9
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.++++. +..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 33 ~~~g~t~L~~-~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (156)
T 1bd8_A 33 NRFGKTALQV-MMFGSTA--IALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAV 109 (156)
T ss_dssp CTTSCCHHHH-SCTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred CCCCCcHHHH-HHcCCHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 3456778888 7776655 4555555 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhh
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 595 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 595 (848)
..|+.+++++|++. ++++. +|..|.||||+|+..|+.+++++|+++
T Consensus 110 ~~~~~~~v~~Ll~~-~~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 110 QEGHTAVVSFLAAE-SDLHR------RDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHTCHHHHHHHHTT-SCTTC------CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HhChHHHHHHHHhc-cCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999998 88887 889999999999999999999999874
No 29
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=2e-19 Score=187.88 Aligned_cols=131 Identities=19% Similarity=0.250 Sum_probs=119.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++|+.|+..++.. +++.|++ |+++|..|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..
T Consensus 36 ~~~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFD--LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp -CHHHHHHHHHHTCHH--HHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred hhhHHHHHHHHcCCHH--HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 4568899999999876 6666666 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCC-CHHHHH--HHcCChHHHHHHHhhhhhhccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGL-NAADIA--SKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~-TpL~lA--~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+.+++++|+++|++++. .|..|. ||||+| +..|+.+++++|+++|++.+..+.
T Consensus 114 ~~~~~v~~Ll~~ga~~~~------~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 114 NNVQVCKFLVESGAAVFA------MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGG
T ss_pred CCHHHHHHHHHcCCCcce------ecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccccc
Confidence 999999999999999998 666776 999999 788999999999999999877543
No 30
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.79 E-value=2.1e-19 Score=187.20 Aligned_cols=131 Identities=17% Similarity=0.259 Sum_probs=119.8
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
++.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..
T Consensus 20 ~~~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~ 97 (229)
T 2vge_A 20 NPLVLLLDAALTGELE--VVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC 97 (229)
T ss_dssp CHHHHHHHHHHHTCHH--HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred chhHHHHHHHHcCCHH--HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 4556788899888876 5555555 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCHHHHH--HHcCChHHHHHHHhhhhhhccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIA--SKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d-~~G~TpL~lA--~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+.+++++|++.|++++. .+ ..|.||||+| +..|+.+++++|+++|++.+..+.
T Consensus 98 g~~~~v~~Ll~~ga~~~~------~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 98 NDTVICMALVQHGAAIFA------TTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNS 154 (229)
T ss_dssp TCHHHHHHHHTTTCCTTC------CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGG
T ss_pred CCHHHHHHHHHcCCCccc------ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccC
Confidence 999999999999999998 54 6999999999 999999999999999999887764
No 31
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.79 E-value=7.9e-19 Score=185.72 Aligned_cols=110 Identities=20% Similarity=0.165 Sum_probs=99.9
Q ss_pred CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 003098 493 KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP 571 (848)
Q Consensus 493 ~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~-G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~ 571 (848)
+++..|..|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.++|++|+++|++++. +|.
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~------~d~ 223 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA------RMY 223 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCT
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc------ccc
Confidence 47778999999999999999999999999999999999865 99999999999999999999999999998 889
Q ss_pred CCCCHHHHHHHcCChHHHHHHHhhhhhhccccccccc
Q 003098 572 GGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 608 (848)
Q Consensus 572 ~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~~ 608 (848)
.|.||||+|+..|+.+++++|+++|++++..+.....
T Consensus 224 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 260 (282)
T 1oy3_D 224 GGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLS 260 (282)
T ss_dssp TSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-----
T ss_pred CCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccc
Confidence 9999999999999999999999999998877654433
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.79 E-value=1.7e-18 Score=178.27 Aligned_cols=132 Identities=21% Similarity=0.199 Sum_probs=118.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 71 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 148 (231)
T 3aji_A 71 DAGWSPLHIAASAGXDE--IVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAA 148 (231)
T ss_dssp TTSCCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCHHH--HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 45778899998888765 5555555 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 149 ~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 203 (231)
T 3aji_A 149 KGNLKMVHILLFYKASTNI------QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203 (231)
T ss_dssp HTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred cCCHHHHHHHHhcCCCccc------cCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 9999999999999999988 789999999999999999999999999998766543
No 33
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.79 E-value=9.3e-19 Score=183.96 Aligned_cols=133 Identities=19% Similarity=0.167 Sum_probs=121.1
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CC-CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GS-KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga-~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
...+.++|+.|+..++.. +++.|++ |+ +++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 87 ~~~g~t~L~~A~~~~~~~--~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 87 DNMGRTPLHAAVSADAQG--VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWA 164 (253)
T ss_dssp CTTSCCHHHHHHHHTCHH--HHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 345778999999888776 5565655 65 8999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 542 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 542 a~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
+..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDM------QNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 999999999999999999998 889999999999999999999999999998876654
No 34
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.78 E-value=2.1e-18 Score=184.69 Aligned_cols=134 Identities=19% Similarity=0.194 Sum_probs=117.3
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccC----------
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK---------- 532 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~---------- 532 (848)
...+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..|.
T Consensus 70 ~~~g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 147 (299)
T 1s70_B 70 NVDGLTALHQACIDDNVD--MVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAE 147 (299)
T ss_dssp CTTCCBHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 345778899998888766 5555655 999999999999999999999999999999999998876653
Q ss_pred --------------------------------------------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 003098 533 --------------------------------------------------YGWTALHWAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 533 --------------------------------------------------~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
.|.||||+|+..|+.+++++|++.|++++.
T Consensus 148 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~ 227 (299)
T 1s70_B 148 EEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI 227 (299)
T ss_dssp SHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC
T ss_pred hcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC
Confidence 477889999999999999999999999998
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 563 VTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 563 ~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
+|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 228 ------~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 264 (299)
T 1s70_B 228 ------KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKV 264 (299)
T ss_dssp ------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ------cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCC
Confidence 8899999999999999999999999999998776543
No 35
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.78 E-value=1.5e-19 Score=171.69 Aligned_cols=125 Identities=21% Similarity=0.176 Sum_probs=95.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 8 ~~g~t~L~~A~~~~~~~--~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIP--SVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp TTCCCHHHHHHHHTCHH--HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence 45677888888777665 4444444 88888888888888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhh
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQAL 597 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga 597 (848)
.|+.+++++|+++|++++. +|..|.|||++|+..++.+++.+|.+.+.
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 86 NGHVDIVKLLLSYGASRNA------VNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp TTCHHHHHHHHHTTCCTTC------CCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred cCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 8888888888888888877 77888888888888777777777766553
No 36
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=1.8e-19 Score=185.41 Aligned_cols=132 Identities=21% Similarity=0.238 Sum_probs=109.9
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHC-CCCCccccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~-Ga~in~~D~~G~TpLh~Aa 542 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+||..|+.++|++|+.. |+++|.+|..|+||||+|+
T Consensus 71 ~~g~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLS--WLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp EEESCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccCcHH--HHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 34678999999999876 4555555 999999999999999999999999999999998 9999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
..|+.+++++|+++|++++. +|..|.|||++|+..|+.++++.|++.|+...+.+.
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDL------RNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCC------CCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred HcCCHHHHHHHHHcCCCCcc------ccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 99999999999999999998 889999999999999999999999999998876653
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.78 E-value=3e-18 Score=175.41 Aligned_cols=127 Identities=19% Similarity=0.189 Sum_probs=96.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 90 ~~g~t~L~~A~~~~~~~--~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 167 (223)
T 2f8y_A 90 HDGTTPLILAARLAVEG--MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAR 167 (223)
T ss_dssp TTCCCHHHHHHHHTCHH--HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCcHHHHHHHhCcHH--HHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHH
Confidence 44667777777777654 4444444 77777777778888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
.|+.+++++|+++|++++. +|..|.|||++|+..|+.+++++|+++|+..
T Consensus 168 ~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 168 EGSYETAKVLLDHFANRDI------TDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred cCCHHHHHHHHHcCCCCcc------ccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 8888888888888877776 6777888888888888888888888877653
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.78 E-value=2.8e-18 Score=175.68 Aligned_cols=134 Identities=19% Similarity=0.164 Sum_probs=122.5
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CC-CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GS-KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga-~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
..+.++++.|+..++.. +++.|++ +. +++..|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+
T Consensus 56 ~~g~t~L~~A~~~~~~~--~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 133 (223)
T 2f8y_A 56 NMGRTPLHAAVSADAQG--VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAA 133 (223)
T ss_dssp TTSCCHHHHHHHTTCHH--HHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHH
Confidence 45778999999888776 5555555 65 88999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l 606 (848)
..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+...
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 191 (223)
T 2f8y_A 134 AVNNVDAAVVLLKNGANKDM------QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 191 (223)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred HcCCHHHHHHHHHcCCCCCC------cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccC
Confidence 99999999999999999998 88999999999999999999999999999999886543
No 39
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.78 E-value=5.3e-19 Score=185.84 Aligned_cols=134 Identities=20% Similarity=0.136 Sum_probs=118.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCcccc--------------CCCCchHHHHHHcCCHHHHHHHHH---CCCCC
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD--------------VHGQGVIHLCAMLGYTWAILLFSW---SGLSL 527 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D--------------~~G~T~LH~Aa~~G~~~~v~~LL~---~Ga~i 527 (848)
.+.++|+.|+..++.. +++.|++ |++++..| ..|.||||+|+..|+.+++++|++ .|+++
T Consensus 92 ~g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~ 169 (260)
T 3jxi_A 92 RGQTALHIAIERRCKH--YVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL 169 (260)
T ss_dssp ESBCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred CCCCHHHHHHHcCCHH--HHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC
Confidence 6789999999998876 5666666 99999988 689999999999999999999999 99999
Q ss_pred ccccCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCCCCCC-CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhh
Q 003098 528 DFRDKYGWTALHWAAYYGR---------EKMVVDLLSAGAKPNLVT-DPTSQNPGGLNAADIASKKGFDGLAAFLSEQAL 597 (848)
Q Consensus 528 n~~D~~G~TpLh~Aa~~G~---------~eiv~~LL~~GA~in~~t-d~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga 597 (848)
+.+|..|+||||+|+..|+ .+++++|+++|++++... ..+.+|..|.||||+|+..|+.+++++|+++|.
T Consensus 170 ~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 170 RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999888 799999999999984210 002288999999999999999999999999998
Q ss_pred hhcc
Q 003098 598 VAQF 601 (848)
Q Consensus 598 ~~~l 601 (848)
+...
T Consensus 250 ~~~~ 253 (260)
T 3jxi_A 250 ADAA 253 (260)
T ss_dssp HHHC
T ss_pred Cccc
Confidence 8643
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.78 E-value=2.5e-18 Score=176.38 Aligned_cols=133 Identities=19% Similarity=0.194 Sum_probs=122.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-C--CCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-G--SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-G--a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
..+.++++.++..++.. +++.|++ | ++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 70 ~~g~t~L~~A~~~~~~~--~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 70 DSGWTPFHIACSVGNLE--VVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp TTSCCHHHHHHHHCCHH--HHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 45778999999988876 6666666 7 88999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH-hhhhhhcccccc
Q 003098 542 AYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS-EQALVAQFNDMT 605 (848)
Q Consensus 542 a~~G~~eiv~~LL~~G-A~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl-e~Ga~~~l~~~~ 605 (848)
+..|+.+++++|++.| ++++. +|..|.||||+|+..|+.+++++|+ +.|++.+..+..
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~~~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~ 207 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSAVNW------QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNK 207 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTT
T ss_pred HHcCCHHHHHHHHhcCcccccC------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCC
Confidence 9999999999999999 98888 8899999999999999999999999 899998776643
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.77 E-value=7.5e-19 Score=184.46 Aligned_cols=128 Identities=20% Similarity=0.197 Sum_probs=117.3
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCC-------------CCchHHHHHHcCCHHHHHHHHH---CCCCC
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVH-------------GQGVIHLCAMLGYTWAILLFSW---SGLSL 527 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~-------------G~T~LH~Aa~~G~~~~v~~LL~---~Ga~i 527 (848)
..+.++|+.|+..++.. +++.|++ |++++..|.. |.||||+|+..|+.+++++|++ .|+++
T Consensus 88 ~~g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~ 165 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQ--CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL 165 (256)
T ss_dssp TTTCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred ccCCCHHHHHHHcCCHH--HHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence 35789999999998876 5666665 9999998886 9999999999999999999999 99999
Q ss_pred ccccCCCCcHHHHHHH--cCCHH-------HHHHHHHcCCCC-------CCCCCCCCCCCCCCCHHHHHHHcCChHHHHH
Q 003098 528 DFRDKYGWTALHWAAY--YGREK-------MVVDLLSAGAKP-------NLVTDPTSQNPGGLNAADIASKKGFDGLAAF 591 (848)
Q Consensus 528 n~~D~~G~TpLh~Aa~--~G~~e-------iv~~LL~~GA~i-------n~~td~~~~d~~G~TpL~lA~~~G~~~iv~l 591 (848)
|.+|..|+||||+|+. .|+.+ ++++|+++|+++ +. +|..|.||||+|+..|+.+++++
T Consensus 166 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~------~d~~g~tpL~~A~~~g~~~~v~~ 239 (256)
T 2etb_A 166 EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEI------SNHQGLTPLKLAAKEGKIEIFRH 239 (256)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGC------CCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccc------cCCCCCCHHHHHHHhCCHHHHHH
Confidence 9999999999999999 78888 999999999999 66 88999999999999999999999
Q ss_pred HHhhhhhhc
Q 003098 592 LSEQALVAQ 600 (848)
Q Consensus 592 Lle~Ga~~~ 600 (848)
|+++|.+..
T Consensus 240 Ll~~g~~~~ 248 (256)
T 2etb_A 240 ILQREFSGA 248 (256)
T ss_dssp HHHHHHHHH
T ss_pred HHhCCCCCC
Confidence 999998764
No 42
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.77 E-value=7.6e-19 Score=186.42 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=116.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccC--------------CCCchHHHHHHcCCHHHHHHHHH---CCCCC
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDV--------------HGQGVIHLCAMLGYTWAILLFSW---SGLSL 527 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~--------------~G~T~LH~Aa~~G~~~~v~~LL~---~Ga~i 527 (848)
.+.++|+.|+..++.. +++.|++ |++++..|. .|.||||+|+..|+.+++++|++ .|+++
T Consensus 100 ~g~tpL~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~ 177 (273)
T 2pnn_A 100 KGQTALHIAIERRNMT--LVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI 177 (273)
T ss_dssp TTCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred CCCCHHHHHHHcCCHH--HHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc
Confidence 5789999999988776 5666666 999999887 79999999999999999999999 99999
Q ss_pred ccccCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCCCCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHhhhh
Q 003098 528 DFRDKYGWTALHWAAYYGR---------EKMVVDLLSAGAKPNLVTD-PTSQNPGGLNAADIASKKGFDGLAAFLSEQAL 597 (848)
Q Consensus 528 n~~D~~G~TpLh~Aa~~G~---------~eiv~~LL~~GA~in~~td-~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga 597 (848)
+.+|..|+||||+|+..|+ .+++++|+++|++++...+ .+.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 178 ~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 178 SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 9999999999999999998 8999999999999873110 01278999999999999999999999999999
Q ss_pred -hhcc
Q 003098 598 -VAQF 601 (848)
Q Consensus 598 -~~~l 601 (848)
++..
T Consensus 258 ~dp~~ 262 (273)
T 2pnn_A 258 HEPEC 262 (273)
T ss_dssp C----
T ss_pred CCchh
Confidence 5443
No 43
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.77 E-value=1.5e-18 Score=167.81 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=114.3
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc--CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~--Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
+.++++.|+..++.. +++.|++ +.+++..|..|.||||+ +..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~--~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQ--EVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHH--HHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHH--HHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 357899999999877 4444444 55899999999999999 999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++. ++.+..+
T Consensus 79 ~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~ 130 (156)
T 1bd8_A 79 GFLDTLKVLVEHGADVNV------PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRD 130 (156)
T ss_dssp TCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCC
T ss_pred CcHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcC
Confidence 999999999999999998 889999999999999999999999998 6665544
No 44
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.77 E-value=1.8e-18 Score=161.21 Aligned_cols=109 Identities=24% Similarity=0.265 Sum_probs=97.4
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++++.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 6 ~~~~~l~~A~~~~~~~--~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLD--EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp -CHHHHHHHHHTTCHH--HHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHH--HHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 3567888888888776 4444444 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 582 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~ 582 (848)
|+.+++++|+++|++++. +|..|.||||+|..
T Consensus 84 ~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTV------KGPDGLTAFEATDN 115 (123)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHCCC
T ss_pred CCHHHHHHHHHcCCCCCC------cCCCCCCHHHHhCC
Confidence 999999999999999988 88999999999943
No 45
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.77 E-value=7.9e-19 Score=187.48 Aligned_cols=133 Identities=21% Similarity=0.193 Sum_probs=105.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
.+.++++.++..+.....+..++..|+++|..|..|+||||+||..|+.++|++|+..|++++.++..|.||||+|+..+
T Consensus 51 ~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~ 130 (269)
T 4b93_B 51 EFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQG 130 (269)
T ss_dssp ------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccC
Confidence 45678888887776554333334449999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 546 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 546 ~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 131 ~~~~~~~Ll~~g~~~n~------~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~ 183 (269)
T 4b93_B 131 HFQVVKCLLDSNAKPNK------KDLSGNTPLIYACSGGHHELVALLLQHGASINASNN 183 (269)
T ss_dssp CHHHHHHHHHTTCCSCC------CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT
T ss_pred hHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc
Confidence 99999999999999998 889999999999999999999999999999877654
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.77 E-value=2.9e-18 Score=177.71 Aligned_cols=143 Identities=16% Similarity=0.152 Sum_probs=96.3
Q ss_pred HHHHHHHhCCCCCC----cccccchHHHHHHcCCcHHHHHHHHHc-CCC------CccccCCCCchHHHHHHcCCHHHHH
Q 003098 450 WAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLKEWLLERVVE-GSK------TTEYDVHGQGVIHLCAMLGYTWAIL 518 (848)
Q Consensus 450 ~~~li~~l~~~~~~----~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~------in~~D~~G~T~LH~Aa~~G~~~~v~ 518 (848)
...+++.+...+.+ ...+.++|+.|+..++.. +++.|+. |++ ++..|..|.||||+|+..|+.++++
T Consensus 57 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 134 (236)
T 1ikn_D 57 QPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLA--SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVE 134 (236)
T ss_dssp CHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHH--HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH--HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHH
Confidence 34555655544432 234566777777766654 4444444 543 3456667777777777777777777
Q ss_pred HHHHCCCCCccccC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhh
Q 003098 519 LFSWSGLSLDFRDK-YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQAL 597 (848)
Q Consensus 519 ~LL~~Ga~in~~D~-~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga 597 (848)
+|++.|++++.+|. .|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|+
T Consensus 135 ~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 135 LLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR------VTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC------CCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------ccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 77777777777776 777777777777777777777777777776 66777777777777777777777777777
Q ss_pred hhc
Q 003098 598 VAQ 600 (848)
Q Consensus 598 ~~~ 600 (848)
+..
T Consensus 209 ~~~ 211 (236)
T 1ikn_D 209 ENL 211 (236)
T ss_dssp GGG
T ss_pred hhh
Confidence 654
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.77 E-value=2.3e-18 Score=190.54 Aligned_cols=135 Identities=16% Similarity=0.175 Sum_probs=122.9
Q ss_pred cccchHHHHHHcC--CcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCC-----CccccCCCCcH
Q 003098 466 EAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS-----LDFRDKYGWTA 537 (848)
Q Consensus 466 ~~~~~ll~aa~~~--~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~-----in~~D~~G~Tp 537 (848)
.+.++|+.|+..+ +.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++ +|..|..|+||
T Consensus 137 ~g~t~L~~A~~~g~~~~~--~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~ 214 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLE--MIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH 214 (364)
T ss_dssp SCCCHHHHHHHSCGGGHH--HHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCT
T ss_pred CCCCHHHHHHHcCCchHH--HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcH
Confidence 4778999999988 554 5555655 999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccccc
Q 003098 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 608 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l~~ 608 (848)
||+|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++....+.....
T Consensus 215 L~~A~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 279 (364)
T 3ljn_A 215 LHWAILINWEDVAMRFVEMGIDVNM------EDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHN 279 (364)
T ss_dssp THHHHTTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccC
Confidence 9999999999999999999999998 8899999999999999999999999999998776655443
No 48
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.77 E-value=4.7e-18 Score=175.29 Aligned_cols=132 Identities=20% Similarity=0.172 Sum_probs=114.8
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCC-----ccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccC-----
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKT-----TEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK----- 532 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~i-----n~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~----- 532 (848)
...+.++|+.|+..++.. +++.|++ |+++ +..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 34 ~~~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 111 (232)
T 2rfa_A 34 GAMGETALHIAALYDNLE--AAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFH 111 (232)
T ss_dssp CTTSCCHHHHHHHTTCHH--HHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCccee
Confidence 345778999999888766 5555555 8776 66788999999999999999999999999999998866
Q ss_pred --------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHH----HHHHhhhhhhc
Q 003098 533 --------YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLA----AFLSEQALVAQ 600 (848)
Q Consensus 533 --------~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv----~lLle~Ga~~~ 600 (848)
.|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++ ++|++.|++..
T Consensus 112 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 112 YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA------QDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred ecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 799999999999999999999999999988 889999999999999999988 99999998775
Q ss_pred ccc
Q 003098 601 FND 603 (848)
Q Consensus 601 l~~ 603 (848)
...
T Consensus 186 ~~~ 188 (232)
T 2rfa_A 186 LKS 188 (232)
T ss_dssp SCC
T ss_pred hhh
Confidence 443
No 49
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.77 E-value=2.3e-18 Score=177.56 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=119.0
Q ss_pred ccchHHHHHHcCCcHHHHHHHHH-c-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCC-----ccccCCCCcHHH
Q 003098 467 AKDSFFELTLKSKLKEWLLERVV-E-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSL-----DFRDKYGWTALH 539 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~-~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~i-----n~~D~~G~TpLh 539 (848)
+.++|+.|+..++.. +++.|+ . |++++..|..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||
T Consensus 3 g~t~L~~A~~~g~~~--~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 3 WESPLLLAAKENDVQ--ALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp TTCHHHHHHHTTCHH--HHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCHHHHHHHcCCHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 678999999999876 444444 4 9999999999999999999999999999999999987 677889999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC-------CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVT-------DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~t-------d~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
+|+..|+.+++++|+++|++++... +++..|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 152 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS 152 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 9999999999999999999998832 1222345899999999999999999999999999877654
No 50
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=1.8e-18 Score=164.10 Aligned_cols=108 Identities=21% Similarity=0.236 Sum_probs=100.0
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
|+|+ ..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~ 73 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------TG 73 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC------cC
Confidence 5667 7899999999999999999999999999999999999999999999999999999999999999988 88
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
..|.||||+|+..|+.+++++|+++|++.+..+..
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 108 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIF 108 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999999999999999999998776553
No 51
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.77 E-value=4.9e-18 Score=170.99 Aligned_cols=124 Identities=19% Similarity=0.314 Sum_probs=88.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHH-c-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCC-CCCccccCCCCcHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVV-E-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWA 541 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~-~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G-a~in~~D~~G~TpLh~A 541 (848)
..+.++++.++..++.. +++.|+ . +.+++..|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|
T Consensus 70 ~~g~t~l~~A~~~~~~~--~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 70 SISDSPYLYAGAQGRTE--ILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp TTSCCHHHHHHHTTCHH--HHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 34566777777666654 444444 3 5677777777777777777777777777777777 77777777777777777
Q ss_pred HHcCC-----HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 542 AYYGR-----EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 542 a~~G~-----~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
+..|. .+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 148 ~~~~~~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 148 VGLREGNQLYQDIVKLLMENGADQSI------KDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHSSCCSHHHHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHhccchhhHHHHHHHHHHCCCCCCc------cCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 77776 7777777777777776 6677777777777777777777777665
No 52
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.77 E-value=2.1e-18 Score=178.79 Aligned_cols=133 Identities=21% Similarity=0.220 Sum_probs=121.4
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCC------CccccCCCCcH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS------LDFRDKYGWTA 537 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~------in~~D~~G~Tp 537 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+..|++ ++..|..|+||
T Consensus 43 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 120 (236)
T 1ikn_D 43 NLQQTPLHLAVITNQPE--IAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC 120 (236)
T ss_dssp TTCCCHHHHHHHTTCHH--HHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCH
Confidence 45788999999998876 6666666 999999999999999999999999999999999976 57788899999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~-~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
||+|+..|+.+++++|++.|++++. +|. .|.||||+|+..|+.+++++|+++|++.+..+..
T Consensus 121 L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 183 (236)
T 1ikn_D 121 LHLASIHGYLGIVELLVSLGADVNA------QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 183 (236)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTC------CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999999998 676 9999999999999999999999999998877643
No 53
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.77 E-value=7e-19 Score=177.66 Aligned_cols=132 Identities=10% Similarity=0.020 Sum_probs=114.4
Q ss_pred cccchHHHHHHcCCcHH--HHHHHHHc-CCCCccccCCCCchHHHHHHcCC------HHHHHHHHHCCCCCccccCCCC-
Q 003098 466 EAKDSFFELTLKSKLKE--WLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY------TWAILLFSWSGLSLDFRDKYGW- 535 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e--~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~------~~~v~~LL~~Ga~in~~D~~G~- 535 (848)
.+.+|||.|+..++... -+++.|++ |+++|.+|..|+||||+|+..|+ .+++++|+++|+++|.+|..|+
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 116 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTB
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCc
Confidence 47789999888876431 14555555 99999999999999999999987 5789999999999999999999
Q ss_pred cHHHHHHHcC-----CHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 536 TALHWAAYYG-----REKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 536 TpLh~Aa~~G-----~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
||||+|+..| +.+++++|++ +|++++. +|..|.||||+|+..|+.+++++|++.....++++
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~------~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI------KDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC------CCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc------cCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 9999999954 4579999999 9999999 89999999999999999999999999876655543
No 54
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.77 E-value=3e-18 Score=181.24 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=118.5
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCC-----------------
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS----------------- 526 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~----------------- 526 (848)
..+.+||+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++
T Consensus 43 ~~g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 120 (282)
T 1oy3_D 43 DLGQTALHLAAILGEAS--TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120 (282)
T ss_dssp TTSCCHHHHHHHHTCHH--HHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccC
Confidence 45789999999999876 5565555 999999999999999999999999999999988765
Q ss_pred ------------------------------CccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCC
Q 003098 527 ------------------------------LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLN 575 (848)
Q Consensus 527 ------------------------------in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~-~G~T 575 (848)
++.+|..|+||||+|+..|+.+++++|+++|++++. .+. .|.|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~~g~t 194 (282)
T 1oy3_D 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK------PEPTCGRT 194 (282)
T ss_dssp -----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------CCTTTCCC
T ss_pred cchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCcC
Confidence 778899999999999999999999999999999998 554 5999
Q ss_pred HHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 576 AADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 576 pL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|||+|+..|+.+++++|+++|++++..+.
T Consensus 195 pL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 195 PLHLAVEAQAASVLELLLKAGADPTARMY 223 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 99999999999999999999999887764
No 55
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.77 E-value=7.8e-18 Score=174.03 Aligned_cols=133 Identities=20% Similarity=0.157 Sum_probs=119.8
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CC----CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcccc-CCCCcH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GS----KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTA 537 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga----~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D-~~G~Tp 537 (848)
...+.++++.++..++.. +++.|++ +. +++..|..|.||||+|+..|+.+++++|++.|++++..| ..|.||
T Consensus 76 ~~~g~t~l~~A~~~~~~~--~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 153 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSPT--CLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSP 153 (241)
T ss_dssp CTTSCCHHHHHHHTTCHH--HHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCH
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcH
Confidence 345778999998888765 4555554 66 888899999999999999999999999999999999999 889999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 154 L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 154 LIHAVENNSLSMVQLLLQHGANVNA------QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC 214 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCC
Confidence 9999999999999999999999998 889999999999999999999999999999876654
No 56
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.76 E-value=3e-18 Score=179.81 Aligned_cols=129 Identities=13% Similarity=0.050 Sum_probs=113.0
Q ss_pred cccccchHHHHHHc---CCcHHHHHHHHHc-CCCCcc-----------ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCc
Q 003098 464 LPEAKDSFFELTLK---SKLKEWLLERVVE-GSKTTE-----------YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD 528 (848)
Q Consensus 464 ~~~~~~~ll~aa~~---~~l~e~Ll~~L~~-Ga~in~-----------~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in 528 (848)
...+.++|+.|+.. ++.. +++.|++ |++++. .|..|.||||+|+..|+.+++++|+++|++++
T Consensus 40 d~~g~t~L~~A~~~~~~g~~~--~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 117 (256)
T 2etb_A 40 GSTGKTCLMKAVLNLQDGVNA--CIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH 117 (256)
T ss_dssp TTTTBCHHHHHHHTCBTTBCT--THHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCHHHHHHHccccchHH--HHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 34678999999988 7654 4444444 666553 34789999999999999999999999999999
Q ss_pred cccCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCCCCCCHHHHHHH--cCChH---
Q 003098 529 FRDKY-------------GWTALHWAAYYGREKMVVDLLS---AGAKPNLVTDPTSQNPGGLNAADIASK--KGFDG--- 587 (848)
Q Consensus 529 ~~D~~-------------G~TpLh~Aa~~G~~eiv~~LL~---~GA~in~~td~~~~d~~G~TpL~lA~~--~G~~~--- 587 (848)
.+|.. |+||||+|+..|+.+++++|++ .|++++. +|..|.||||+|+. .++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~------~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA------TDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc------cCCCCCCHHHHHHHcccCCchhhH
Confidence 99986 9999999999999999999999 9999998 88999999999999 78888
Q ss_pred ----HHHHHHhhhhhhc
Q 003098 588 ----LAAFLSEQALVAQ 600 (848)
Q Consensus 588 ----iv~lLle~Ga~~~ 600 (848)
++++|+++|++..
T Consensus 192 ~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 192 LVIHMYDGLLQMGARLC 208 (256)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCcc
Confidence 9999999999983
No 57
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.76 E-value=8e-18 Score=173.93 Aligned_cols=146 Identities=16% Similarity=0.139 Sum_probs=126.7
Q ss_pred HHHHHHhCCCCC----CcccccchHHHHHHcCCcHHHHHHHHHc-C-CCCccccCCCCchHHHHHHcCCHHHHHHHHHCC
Q 003098 451 AYLFKSVGDKRT----SLPEAKDSFFELTLKSKLKEWLLERVVE-G-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG 524 (848)
Q Consensus 451 ~~li~~l~~~~~----~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-G-a~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G 524 (848)
.++++.+...+. ....+.++++.++..++.. +++.|++ | .+++..|..|.||||+|+..|+.+++++|++.|
T Consensus 57 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~--~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 134 (237)
T 3b7b_A 57 LEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYE--VVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG 134 (237)
T ss_dssp HHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHH--HHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH--HHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 445555544332 2345678899998888766 6666666 6 789999999999999999999999999999999
Q ss_pred CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 525 LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 525 a~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
++++.+|..|.||||+|+..|+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 135 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~ 208 (237)
T 3b7b_A 135 SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA------VNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK 208 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCC
Confidence 99999999999999999999999999999999999988 789999999999999999999999999998876654
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.76 E-value=9.6e-18 Score=168.80 Aligned_cols=132 Identities=18% Similarity=0.149 Sum_probs=117.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHH-HCCCCCccccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFS-WSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL-~~Ga~in~~D~~G~TpLh~Aa 542 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+ ..+++++..|..|.||||+|+
T Consensus 37 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~ 114 (201)
T 3hra_A 37 TEGNTPLNIAVHNNDIE--IAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAA 114 (201)
T ss_dssp TTSCCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHH
Confidence 45778999999888866 5555555 9999999999999999999999999999999 677899999999999999999
Q ss_pred HcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCC-----hHHHHHHHhhhhhhccccc
Q 003098 543 YYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGF-----DGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 543 ~~G~~eiv~~LL~~G-A~in~~td~~~~d~~G~TpL~lA~~~G~-----~~iv~lLle~Ga~~~l~~~ 604 (848)
..|+.+++++|++.| ++++. +|..|.||||+|+..+. .+++++|+++|++++..+.
T Consensus 115 ~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~ 176 (201)
T 3hra_A 115 EKGHIDNVKLLLEDGREDIDF------QNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176 (201)
T ss_dssp HTTCHHHHHHHHHHCCCCTTC------CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT
T ss_pred HcCCHHHHHHHHHcCCCCcCC------CCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC
Confidence 999999999999999 88888 88999999999999887 8999999999998876553
No 59
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.76 E-value=4.6e-18 Score=179.69 Aligned_cols=128 Identities=14% Similarity=0.076 Sum_probs=103.7
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+
T Consensus 33 ~~~g~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~ 109 (261)
T 2xai_A 33 TADHVSPLHEACLGGHLS--CVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAA 109 (261)
T ss_dssp CTTCCCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHH
Confidence 345777888888887765 4555554 888888888888888888888888888888888888875 445888888888
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 600 (848)
..|+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 110 RRGHVECVNSLIAYGGNIDH------KISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HcCcHHHHHHHHHcCCCCCc------CCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 88888888888888888877 77888888888888888888888888888775
No 60
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.76 E-value=5.6e-19 Score=176.66 Aligned_cols=126 Identities=25% Similarity=0.303 Sum_probs=111.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcccc-CCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D-~~G~TpLh~Aa~~ 544 (848)
.+.++|+.++..++.. +++.|++|++++..|..|.||||+|+..|+.+++++|+++|+++|.+| ..|+||||+|+..
T Consensus 43 ~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 43 EYETPWWTAARKADEQ--ALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHTTCHH--HHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHH--HHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 4678899999988876 566666699999999999999999999999999999999999999998 8999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
|+.+++++|+++|++++. +|..|.||||+|+..++.+....++..++..
T Consensus 121 ~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~ 169 (183)
T 3deo_A 121 VRPEVVEALVELGADIEV------EDERGLTALELAREILKTTPKGNPMQFGRRI 169 (183)
T ss_dssp TCHHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHHHHTCCCCSHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCcC------CCCCCCCHHHHHHHhccCcccccHHHHHHHc
Confidence 999999999999999998 8899999999999886665555555555443
No 61
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=4.7e-18 Score=182.50 Aligned_cols=126 Identities=19% Similarity=0.178 Sum_probs=112.4
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCc------cccCCCCchHHHHHHc---CCHHHHHHHHHCCCCCccccCCCCcH
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVEGSKTT------EYDVHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWTA 537 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in------~~D~~G~T~LH~Aa~~---G~~~~v~~LL~~Ga~in~~D~~G~Tp 537 (848)
...+++.++..+++.. +...+..|.+++ ..|..|.||||+|+.. |+.+++++|+++|+++|.+|..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~-~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFG-LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHH-HHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHH-HHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCH
Confidence 3456788887787764 444555588854 4588999999999999 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
||+|+..|+.++|++|+++||+++. +|..|.||||+|+..|+.+++++|+++|+..
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999998 8899999999999999999999999999864
No 62
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=1.7e-18 Score=181.78 Aligned_cols=126 Identities=28% Similarity=0.408 Sum_probs=114.7
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcccc-CCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D-~~G~TpLh~Aa~~ 544 (848)
.+.++|+.|+..++.. +++.|+.|+++|..|..|.||||+||..|+.++|++|+++|+++|.+| ..|+||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQ--ALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHH--HHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHH--HHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 4678899999888876 666666699999999999999999999999999999999999999999 8899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH----------------HcCChHHHHHHHhhhhhh
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS----------------KKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~----------------~~G~~~iv~lLle~Ga~~ 599 (848)
|+.+++++|+++|++++. +|..|.||||+|+ ..|+.+++++|++.+.+.
T Consensus 122 g~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEV------EDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEY 186 (244)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcccc
Confidence 999999999999999998 7889999988887 668999999999987654
No 63
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.76 E-value=5.7e-18 Score=174.31 Aligned_cols=132 Identities=20% Similarity=0.269 Sum_probs=121.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 38 ~~g~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 115 (231)
T 3aji_A 38 QDSRTALHWACSAGHTE--IVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAAS 115 (231)
T ss_dssp TTSCCHHHHHHHHTCHH--HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCcHH--HHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 45788999999999876 5555555 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.|+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 116 ~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 170 (231)
T 3aji_A 116 KNRHEIAVMLLEGGANPDA------KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT 170 (231)
T ss_dssp TTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred cCCHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC
Confidence 9999999999999999988 789999999999999999999999999998876554
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.76 E-value=1.4e-17 Score=181.24 Aligned_cols=96 Identities=22% Similarity=0.253 Sum_probs=76.5
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+.
T Consensus 56 ~~g~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVR--IVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAAS 133 (351)
T ss_dssp TTCCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 34667888888777765 4555555 88888888888888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCC
Q 003098 544 YGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~ 562 (848)
.|+.+++++|+++|++++.
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 134 KNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp TTCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCcc
Confidence 8888888888888887654
No 65
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=1.4e-17 Score=175.56 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=120.9
Q ss_pred cccchHHHHHHcCCcHHHHHHHHH-c-CCCCccccCCCCchHHHHHHcCC----HHHHHHHHHCCCCCccccCCCCcHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVV-E-GSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDKYGWTALH 539 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~-~-Ga~in~~D~~G~T~LH~Aa~~G~----~~~v~~LL~~Ga~in~~D~~G~TpLh 539 (848)
.+.++++.++..++.. +++.|+ . |++++..|..|.||||+|+..|+ .+++++|++.|++++.+|..|.||||
T Consensus 147 ~g~t~L~~A~~~~~~~--~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 147 GGATALMDAAEKGHVE--VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224 (285)
T ss_dssp CCCCHHHHHHHHTCHH--HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHH--HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 4668899999988876 555555 4 99999999999999999999999 99999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 540 WAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
+|+..|+.+++++|++ .|++++. +|..|.||||+|+..|+.+++++|+++|++++..++
T Consensus 225 ~A~~~~~~~~v~~Ll~~~g~~~~~------~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 225 LAVEKKHLGLVQRLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHHTTCHHHHHHHHHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HHHHcCCHHHHHHHHhccCCCccc------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9999999999999999 8999998 889999999999999999999999999999988764
No 66
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=2.7e-18 Score=199.30 Aligned_cols=130 Identities=23% Similarity=0.212 Sum_probs=112.7
Q ss_pred chHHHHHHcCCcHHHHHHHHHcCCCCccc------cCCCCchHHHHHH---cCCHHHHHHHHHCCCCCccccCCCCcHHH
Q 003098 469 DSFFELTLKSKLKEWLLERVVEGSKTTEY------DVHGQGVIHLCAM---LGYTWAILLFSWSGLSLDFRDKYGWTALH 539 (848)
Q Consensus 469 ~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~------D~~G~T~LH~Aa~---~G~~~~v~~LL~~Ga~in~~D~~G~TpLh 539 (848)
+.|+.|+..+++.. +..+|..|+++|.. |..|.||||+|+. .|+.++|++|+++|+++|.+|..|+||||
T Consensus 134 ~~L~~A~~~g~~~~-v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLS-VLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHH-HHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHH-HHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 56899998888773 44444559999987 8899999999966 89999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
+|+..|+.++|++|+++||+++. +|..|.||||+|+..|+.+++++|+++|++.+...+.
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h 272 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLH 272 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSC------CCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcce
Confidence 99999999999999999999999 8899999999999999999999999999998775443
No 67
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.75 E-value=1.4e-18 Score=181.42 Aligned_cols=130 Identities=15% Similarity=0.064 Sum_probs=94.6
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++|+.++..+... .++.|++ |++++. +..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..
T Consensus 4 ~g~t~L~~a~~~~~~~--~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRK--TGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHH--HHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3677888887776554 4444444 999986 47899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 81 g~~~~v~~Ll~~ga~~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 134 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNA------ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 134 (239)
T ss_dssp TCHHHHHHHHHHTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCS
T ss_pred CCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecC
Confidence 999999999999999998 889999999999999999999999999999877663
No 68
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=9.5e-18 Score=190.03 Aligned_cols=132 Identities=18% Similarity=0.210 Sum_probs=104.5
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++++.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.
T Consensus 243 ~~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 320 (437)
T 1n11_A 243 VQGVTPLHLAAQEGHAE--MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASH 320 (437)
T ss_dssp TTCCCHHHHHHHTTCHH--HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHH--HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHH
Confidence 45667777777777655 5555555 88888888888888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 321 ~g~~~~v~~Ll~~gad~n~------~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 321 YGNIKLVKFLLQHQADVNA------KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 375 (437)
T ss_dssp SSCSHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred cCcHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence 8888888888888888877 777888888888888888888888888887766554
No 69
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.75 E-value=1.6e-17 Score=175.50 Aligned_cols=133 Identities=17% Similarity=0.129 Sum_probs=119.1
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa 542 (848)
...+.++++.|+..++.. +++.|++ |++++. +..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+
T Consensus 66 ~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 142 (261)
T 2xai_A 66 TADWHTPLFNACVSGSWD--CVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 142 (261)
T ss_dssp CTTSCCHHHHHHHHTCHH--HHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 456788999999998876 5566665 998885 456999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l 606 (848)
..|+.+++++|++.|++++. |..|.||||+|+..|+.+++++|+++|++.+..+..-
T Consensus 143 ~~~~~~~v~~Ll~~g~~~~~-------~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g 199 (261)
T 2xai_A 143 ENQQRACVKKLLESGADVNQ-------GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEG 199 (261)
T ss_dssp HTTCHHHHHHHHHHTCCTTC-------CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HhCCHHHHHHHHHcCCCCCC-------CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 99999999999999999884 5789999999999999999999999999988776543
No 70
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.75 E-value=8.1e-18 Score=180.13 Aligned_cols=137 Identities=20% Similarity=0.298 Sum_probs=119.8
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++++.||..+++. +++.|++ |+++|..|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 39 ~~~t~l~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 39 DDGAVFLAACSSGDTE--EVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp CHHHHHHHHHHHTCHH--HHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccHHHHHHHcCCHH--HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 4567899999998876 4555555 999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCC------------------------------------------------------CCCCC
Q 003098 545 GREKMVVDLLSAGAKPNLVTD------------------------------------------------------PTSQN 570 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td------------------------------------------------------~~~~d 570 (848)
|+.+++++|+++|++++..+. ....+
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhc
Confidence 999999999999999987431 01134
Q ss_pred CCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 571 PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 571 ~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 6788999999999999999999999999877664
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.74 E-value=6.8e-18 Score=180.51 Aligned_cols=100 Identities=21% Similarity=0.221 Sum_probs=61.6
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQ 569 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~-~GA~in~~td~~~~ 569 (848)
|.+++..|..|.||||+|+..|+.++|++|++.|+++|.+|..|+||||+|+..|+.+++++|++ .|++++. +
T Consensus 173 g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~------~ 246 (276)
T 4hbd_A 173 GNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL------T 246 (276)
T ss_dssp SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC------C
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC------c
Confidence 55555555556666666666666666666666666666666666666666666666666666666 5666655 5
Q ss_pred CCCCCCHHHHHHHcCChHHHHHHHhhh
Q 003098 570 NPGGLNAADIASKKGFDGLAAFLSEQA 596 (848)
Q Consensus 570 d~~G~TpL~lA~~~G~~~iv~lLle~G 596 (848)
|..|.||||+|+..|+.+++++|++++
T Consensus 247 d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 247 DRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 566666666666666666666666543
No 72
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.74 E-value=7.9e-18 Score=182.85 Aligned_cols=126 Identities=24% Similarity=0.245 Sum_probs=114.8
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCcc------ccCCCCchHHHHHHc---CCHHHHHHHHHCCCCCccccCCCCcH
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVEGSKTTE------YDVHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWTA 537 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~------~D~~G~T~LH~Aa~~---G~~~~v~~LL~~Ga~in~~D~~G~Tp 537 (848)
..++|+.|+..+++.. +..++..|++++. .|..|.||||+|+.. |+.+++++|+++|+++|.+|..|+||
T Consensus 151 ~~~~L~~A~~~g~~~~-v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLS-VLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHH-HHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHH-HHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 3456888888888763 4445555999998 689999999999997 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
||+|+..|+.++|++|+++||+++. +|..|.||||+|+..|+.+++++|+++|++.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~------~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSC------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 9999999999999999999999998 8899999999999999999999999999884
No 73
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.74 E-value=2.8e-17 Score=169.86 Aligned_cols=132 Identities=20% Similarity=0.326 Sum_probs=120.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCC-CCCccccCCCCcHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAA 542 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G-a~in~~D~~G~TpLh~Aa 542 (848)
..+.++++.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.| ++++..|..|+||||+|+
T Consensus 42 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~ 119 (237)
T 3b7b_A 42 EDQRTPLMEAAENNHLE--AVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT 119 (237)
T ss_dssp TTCCCHHHHHHHTTCHH--HHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHhCCHH--HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHH
Confidence 45778999999888776 5666666 9999999999999999999999999999999998 899999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++.|++.+..+.
T Consensus 120 ~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 175 (237)
T 3b7b_A 120 EYKHVDLVKLLLSKGSDINI------RDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNI 175 (237)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCT
T ss_pred HcCCHHHHHHHHHCCCCCCc------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999988 789999999999999999999999999998876653
No 74
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.74 E-value=2.5e-18 Score=163.31 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=101.2
Q ss_pred CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 003098 491 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 570 (848)
Q Consensus 491 Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d 570 (848)
+++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++. +|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------~~ 74 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC------AD 74 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC------CB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC------cC
Confidence 56889999999999999999999999999999999999999999999999999 999999999999999998 78
Q ss_pred CC-CCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 571 PG-GLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 571 ~~-G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.. |.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA 109 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 88 99999999999999999999999988766543
No 75
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.74 E-value=1.1e-17 Score=183.00 Aligned_cols=128 Identities=16% Similarity=0.082 Sum_probs=106.1
Q ss_pred cccccchHHHHHHcCCc--HHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHH-CCCCCccccCCCCcHHH
Q 003098 464 LPEAKDSFFELTLKSKL--KEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALH 539 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l--~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~-~Ga~in~~D~~G~TpLh 539 (848)
...+.++++.++..+.. .+.+++.|++ |+++|.+|..|.||||+|+..|+.++++.|+. .|+++|.+|..|+||||
T Consensus 199 d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~ 278 (337)
T 4g8k_A 199 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALL 278 (337)
T ss_dssp CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHH
T ss_pred CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHH
Confidence 34567788887765532 2335565555 99999999999999999999999999999987 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
+|+..|+.++|++||++||+++. .|||++|+..|+.+++++|+++||++++.
T Consensus 279 ~A~~~g~~~iv~~Ll~~GAd~n~-----------~~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 279 LAVELKLKKIAELLCKRGASTDC-----------GDLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HHHHTTCHHHHHHHHTTSCSSTT-----------CCHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred HHHHcCCHHHHHHHHHCCCCCCC-----------CCHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 99999999999999999998776 35999999999999999999999998764
No 76
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.74 E-value=1.1e-17 Score=182.10 Aligned_cols=132 Identities=20% Similarity=0.185 Sum_probs=120.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++|+.++..++... +...|.. +.+++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 23 ~~~~~L~~A~~~g~~~~-v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 23 YKKDELLEAARSGNEEK-LMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHHTCHHH-HHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred ccchhHHHHHHcCCHHH-HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 35678999999998873 4444444 889999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 102 g~~~iv~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 155 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNA------MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNC 155 (351)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 999999999999999998 789999999999999999999999999998876553
No 77
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.74 E-value=7.7e-18 Score=184.56 Aligned_cols=154 Identities=16% Similarity=0.087 Sum_probs=124.1
Q ss_pred HHHHHHHhCCCCC-----CcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC---HHHHHHH
Q 003098 450 WAYLFKSVGDKRT-----SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY---TWAILLF 520 (848)
Q Consensus 450 ~~~li~~l~~~~~-----~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~---~~~v~~L 520 (848)
...+++.+...+. ....+.+|||.|+..++.. +++.|++ |++++..|..|.||||+|+..|+ .++++.|
T Consensus 109 ~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~--~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~l 186 (327)
T 1sw6_A 109 LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLE--LVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186 (327)
T ss_dssp HHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHH--HHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHH--HHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHH
Confidence 3455555554443 3356889999999999876 5666666 99999999999999999999998 6778888
Q ss_pred HHCC-CCCccccCCCCcHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCC-----------
Q 003098 521 SWSG-LSLDFRDKYGWTALHWAAY----YGREKMVVDLLSA--------------------GAKPNLVT----------- 564 (848)
Q Consensus 521 L~~G-a~in~~D~~G~TpLh~Aa~----~G~~eiv~~LL~~--------------------GA~in~~t----------- 564 (848)
++.+ ++++.+|..|+||||+|+. .|+.+++++|++. |++++..+
T Consensus 187 l~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~ 266 (327)
T 1sw6_A 187 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL 266 (327)
T ss_dssp HHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHC
T ss_pred HHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHH
Confidence 8776 7899999999999999999 8999999999987 55555432
Q ss_pred --------CCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 565 --------DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 565 --------d~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
+++.+|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 267 ~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 315 (327)
T 1sw6_A 267 DLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKS 315 (327)
T ss_dssp SHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 35668999999999999999999999999999998877654
No 78
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.74 E-value=7.6e-18 Score=180.15 Aligned_cols=133 Identities=21% Similarity=0.210 Sum_probs=120.9
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CC-CCccccCCCCchHHHHH-----HcCCHHHHHHHHHCCCCCccccCCCCc
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-GS-KTTEYDVHGQGVIHLCA-----MLGYTWAILLFSWSGLSLDFRDKYGWT 536 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga-~in~~D~~G~T~LH~Aa-----~~G~~~~v~~LL~~Ga~in~~D~~G~T 536 (848)
...+.++|+.|+..++.. +++.|++ |+ +++..|..|.||||+|+ ..+..+++++|+..|++++..|..|+|
T Consensus 108 d~~g~T~Lh~A~~~g~~~--~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 185 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFP--VVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQT 185 (276)
T ss_dssp CTTSCCHHHHHHHTTCHH--HHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCC
T ss_pred CCCCCCHHHHHHHCCCHH--HHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCC
Confidence 345889999999998876 5666665 87 99999999999999999 568899999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHh-hhhhhccccc
Q 003098 537 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE-QALVAQFNDM 604 (848)
Q Consensus 537 pLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle-~Ga~~~l~~~ 604 (848)
|||+|+..|+.++|++|++.|++++. +|..|.||||+|+..|+.+++++|++ .|++.+..+.
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~ 248 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNV------QDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDR 248 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCC
Confidence 99999999999999999999999998 88999999999999999999999999 8998876554
No 79
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.73 E-value=2.5e-17 Score=176.66 Aligned_cols=126 Identities=14% Similarity=0.075 Sum_probs=85.7
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++..+ .|.||||+|+..
T Consensus 91 ~g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~ 167 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLS--CVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARR 167 (285)
T ss_dssp TCCCHHHHHHHTTCHH--HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHH
T ss_pred CCCCHHHHHHHCCcHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHc
Confidence 4556666666666554 4444444 67777777777777777777777777777777777766433 367777777777
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 600 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 600 (848)
|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|++.|++.+
T Consensus 168 g~~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 168 GHVECVNSLIAYGGNIDH------KISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp TCHHHHHHHHHTTCCTTC------CBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC
Confidence 777777777777776666 66777777777777777777777777776654
No 80
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.73 E-value=1.1e-17 Score=175.65 Aligned_cols=128 Identities=13% Similarity=0.086 Sum_probs=109.9
Q ss_pred ccccchHHHHHH---cCCcHHHHHHHHHc-CC-----------CCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcc
Q 003098 465 PEAKDSFFELTL---KSKLKEWLLERVVE-GS-----------KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 529 (848)
Q Consensus 465 ~~~~~~ll~aa~---~~~l~e~Ll~~L~~-Ga-----------~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~ 529 (848)
..+.++|+.|+. .++.. +++.|++ |+ +++..|..|.||||+|+..|+.++|++|++.|++++.
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~--~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 121 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRND--TIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA 121 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCT--HHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCcHHHHHHHHhhcCCHH--HHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc
Confidence 347889999884 35443 3444443 43 3445666999999999999999999999999999999
Q ss_pred cc--------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCCCCCCHHHHHHHcCC-------
Q 003098 530 RD--------------KYGWTALHWAAYYGREKMVVDLLS---AGAKPNLVTDPTSQNPGGLNAADIASKKGF------- 585 (848)
Q Consensus 530 ~D--------------~~G~TpLh~Aa~~G~~eiv~~LL~---~GA~in~~td~~~~d~~G~TpL~lA~~~G~------- 585 (848)
+| ..|+||||+|+..|+.++|++|++ .|++++. +|..|.||||+|+..|+
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~------~d~~g~TpLh~A~~~~~~~~~~~~ 195 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR------QDSRGNTVLHALVAIADNTRENTK 195 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHCCSSHHHHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc------cCCCCCcHHHHHHHhccCchhHHH
Confidence 99 689999999999999999999999 9999998 88999999999999888
Q ss_pred --hHHHHHHHhhhhhhc
Q 003098 586 --DGLAAFLSEQALVAQ 600 (848)
Q Consensus 586 --~~iv~lLle~Ga~~~ 600 (848)
.+++++|+++|++.+
T Consensus 196 ~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 196 FVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcccc
Confidence 799999999999984
No 81
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.73 E-value=3.3e-17 Score=168.06 Aligned_cols=133 Identities=14% Similarity=0.033 Sum_probs=118.5
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-C--CCCcc-ccCCCCchHHHHHHcCCHHHHHHHHHCC--CCCccccCCCCcH
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-G--SKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSG--LSLDFRDKYGWTA 537 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-G--a~in~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~G--a~in~~D~~G~Tp 537 (848)
...+.++|+.|+..++.. +++.|++ | .+++. .|..|.||||+|+..|+.+++++|++.| ++++..|..|.||
T Consensus 33 ~~~g~t~L~~A~~~~~~~--~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~ 110 (228)
T 2dzn_A 33 DQDGRIPLHWSVSFQAHE--ITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTC 110 (228)
T ss_dssp CTTSCCHHHHHHHTTCHH--HHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCH
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCH
Confidence 345778999999888766 5555555 7 56666 8899999999999999999999999999 8999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhh-hhhccccc
Q 003098 538 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA-LVAQFNDM 604 (848)
Q Consensus 538 Lh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G-a~~~l~~~ 604 (848)
||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.| ++.+..+.
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRI------KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK 172 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCT
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCC
Confidence 9999999999999999999999998 8899999999999999999999999999 77766553
No 82
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.73 E-value=7.7e-18 Score=180.82 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=60.3
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCC-CcHHHHHHHc
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYG-WTALHWAAYY 544 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G-~TpLh~Aa~~ 544 (848)
+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..| .||||+|+..
T Consensus 62 g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 62 NEFPLHQAATLEDTK--IVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp TCCHHHHHTTSSSCH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CCCHHHHHHHcCCHH--HHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 344444444444433 2333333 44555445555555555555555555555555555555555444 3555555555
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 602 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 602 (848)
|+.+++++|+++|+++.- ...|.||||+|+..|+.+++++|+++|++++..
T Consensus 140 ~~~~~v~~Ll~~g~~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~ 190 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFD-------LAILLSCIHITIKNGHVDMMILLLDYMTSTNTN 190 (285)
T ss_dssp TCHHHHHHHHTTSCTTCC-------CSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTT
T ss_pred CCHHHHHHHHhCCCcccc-------ccCCccHHHHHHHcChHHHHHHHHHcCCCCCcc
Confidence 555555555554444321 014455555555555555555555555544433
No 83
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.73 E-value=1.7e-17 Score=183.41 Aligned_cols=148 Identities=20% Similarity=0.196 Sum_probs=125.4
Q ss_pred CHHHHHHHhCCCCC--CcccccchHHHHHHcCCcHHHHHHHHHc-----CCCCcc-----------------ccCCCCch
Q 003098 449 SWAYLFKSVGDKRT--SLPEAKDSFFELTLKSKLKEWLLERVVE-----GSKTTE-----------------YDVHGQGV 504 (848)
Q Consensus 449 ~~~~li~~l~~~~~--~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-----Ga~in~-----------------~D~~G~T~ 504 (848)
+..++++.+...+. ....+.++|+.|+..++.. +++.|++ |++++. .|..|.||
T Consensus 64 g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 141 (364)
T 3ljn_A 64 GCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTD--LVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTA 141 (364)
T ss_dssp CCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHH--HHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCH
T ss_pred CCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHH--HHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCH
Confidence 34455555533332 3346788999999988765 3333333 777776 88999999
Q ss_pred HHHHHHcC--CHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCCCCCCCHH
Q 003098 505 IHLCAMLG--YTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAK-----PNLVTDPTSQNPGGLNAA 577 (848)
Q Consensus 505 LH~Aa~~G--~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~-----in~~td~~~~d~~G~TpL 577 (848)
||+|+..| +.++|++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++ ++. .|..|.|||
T Consensus 142 L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~------~~~~g~t~L 215 (364)
T 3ljn_A 142 LHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY------ANKQGNSHL 215 (364)
T ss_dssp HHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC------CCTTCCCTT
T ss_pred HHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc------cCCCCCcHH
Confidence 99999999 99999999999999999999999999999999999999999999999 666 889999999
Q ss_pred HHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 578 DIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 578 ~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+|+..|+.+++++|+++|++++..+.
T Consensus 216 ~~A~~~g~~~~v~~Ll~~gad~~~~d~ 242 (364)
T 3ljn_A 216 HWAILINWEDVAMRFVEMGIDVNMEDN 242 (364)
T ss_dssp HHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999877664
No 84
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.73 E-value=3.7e-18 Score=156.92 Aligned_cols=105 Identities=24% Similarity=0.247 Sum_probs=99.2
Q ss_pred cccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 003098 496 EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLN 575 (848)
Q Consensus 496 ~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~T 575 (848)
..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++. +|..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA------RSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC------CCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCC
Confidence 4688999999999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHHcCChHHHHHHHhhhhhhccccccc
Q 003098 576 AADIASKKGFDGLAAFLSEQALVAQFNDMTL 606 (848)
Q Consensus 576 pL~lA~~~G~~~iv~lLle~Ga~~~l~~~~l 606 (848)
|||+|+..|+.+++++|+++|++.+..+...
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~ 108 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGADVNARSWGS 108 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSSHHHHSCCC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCcCCccc
Confidence 9999999999999999999999987766543
No 85
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.73 E-value=1.2e-17 Score=177.12 Aligned_cols=129 Identities=14% Similarity=0.101 Sum_probs=112.4
Q ss_pred ccccchHHHHHHc---CCcHHHHHHHHHc-CCCC-------c----cccCCCCchHHHHHHcCCHHHHHHHHHCCCCCcc
Q 003098 465 PEAKDSFFELTLK---SKLKEWLLERVVE-GSKT-------T----EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 529 (848)
Q Consensus 465 ~~~~~~ll~aa~~---~~l~e~Ll~~L~~-Ga~i-------n----~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~ 529 (848)
..+.++|+.|+.. ++.. +++.|++ |+++ + ..|..|.||||+|+..|+.++|++|+++|++++.
T Consensus 52 ~~g~tpL~~A~~~~~~g~~~--~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 52 ETGKTCLLKAMLNLHNGQND--TIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTCCCHHHHHHHSCBTTBCH--HHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCHHHHHHHHHhcCChH--HHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 4578899999975 6554 4444544 5442 2 2567899999999999999999999999999999
Q ss_pred ccC--------------CCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCCCCCCHHHHHHHcCC-------
Q 003098 530 RDK--------------YGWTALHWAAYYGREKMVVDLLS---AGAKPNLVTDPTSQNPGGLNAADIASKKGF------- 585 (848)
Q Consensus 530 ~D~--------------~G~TpLh~Aa~~G~~eiv~~LL~---~GA~in~~td~~~~d~~G~TpL~lA~~~G~------- 585 (848)
+|. .|+||||+|+..|+.+++++|++ .|++++. +|..|.||||+|+..|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~------~d~~g~tpLh~A~~~~~~~~~~~~ 203 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA------RDSVGNTVLHALVEVADNTVDNTK 203 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee------eCCCCCcHHHHHHHccCcchhHHH
Confidence 997 79999999999999999999999 9999998 88999999999999998
Q ss_pred --hHHHHHHHhhhhhhcc
Q 003098 586 --DGLAAFLSEQALVAQF 601 (848)
Q Consensus 586 --~~iv~lLle~Ga~~~l 601 (848)
.+++++|+++|++.+.
T Consensus 204 ~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 204 FVTSMYNEILILGAKLHP 221 (273)
T ss_dssp HHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhhhhccc
Confidence 7999999999999753
No 86
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.73 E-value=5.1e-17 Score=167.89 Aligned_cols=132 Identities=19% Similarity=0.151 Sum_probs=118.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCC----CCccccCCCCcHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGL----SLDFRDKYGWTALH 539 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga----~in~~D~~G~TpLh 539 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+..|+ +++..|..|+||||
T Consensus 44 ~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~ 121 (241)
T 1k1a_A 44 NLRQTPLHLAVITTLPS--VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121 (241)
T ss_dssp TTSCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHH
T ss_pred ccCCCHHHHHHHcCCHH--HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHH
Confidence 45778999998888766 5555555 99999999999999999999999999999999887 88999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d-~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
+|+..|+.+++++|++.|++++. .+ ..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 122 ~A~~~~~~~~~~~Ll~~g~~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (241)
T 1k1a_A 122 VAVNTECQETVQLLLERGADIDA------VDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 181 (241)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHHHcCCHHHHHHHHHcCCCccc------ccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999988 56 7899999999999999999999999998876653
No 87
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.72 E-value=3.9e-17 Score=175.17 Aligned_cols=146 Identities=16% Similarity=0.095 Sum_probs=124.2
Q ss_pred HHHHHHHhCCCC----CCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCC
Q 003098 450 WAYLFKSVGDKR----TSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG 524 (848)
Q Consensus 450 ~~~li~~l~~~~----~~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G 524 (848)
..++++.+...+ .....+.++++.|+..++.. +++.|++ |++++..+ .|.||||+|+..|+.+++++|++.|
T Consensus 104 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~--~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g 180 (285)
T 3d9h_A 104 HLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD--CVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYG 180 (285)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHH--HHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHH--HHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 345555553333 23456788999999998876 5666665 88887644 5999999999999999999999999
Q ss_pred CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 525 LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 525 a~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
++++.+|..|+||||+|+..|+.+++++|++.|++++. |..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 181 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~ 253 (285)
T 3d9h_A 181 GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-------GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNA 253 (285)
T ss_dssp CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 99999999999999999999999999999999999884 57899999999999999999999999999877665
Q ss_pred c
Q 003098 605 T 605 (848)
Q Consensus 605 ~ 605 (848)
.
T Consensus 254 ~ 254 (285)
T 3d9h_A 254 E 254 (285)
T ss_dssp T
T ss_pred C
Confidence 3
No 88
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.72 E-value=1.6e-17 Score=154.75 Aligned_cols=101 Identities=16% Similarity=0.065 Sum_probs=94.1
Q ss_pred cCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 003098 498 DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAA 577 (848)
Q Consensus 498 D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL 577 (848)
+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++. +|..|.|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------PDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCHH
Confidence 45788999999999999999999999999999999999999999999999999999999999998 889999999
Q ss_pred HHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 578 DIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 578 ~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|+|+..|+.+++++|+++|++.+..+.
T Consensus 78 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 104 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKGADKTVKGP 104 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999998776654
No 89
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.72 E-value=2.3e-17 Score=184.26 Aligned_cols=126 Identities=14% Similarity=0.175 Sum_probs=111.8
Q ss_pred ccchHHHHHHc-CCcHHHHHHHHHcCCCCcccc--CCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 467 AKDSFFELTLK-SKLKEWLLERVVEGSKTTEYD--VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 467 ~~~~ll~aa~~-~~l~e~Ll~~L~~Ga~in~~D--~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..++|+.|+.. +++. .+..+|..|+++|..| ..|.||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+.
T Consensus 199 ~~t~L~~Aa~~~g~~~-~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 199 PGALLFRASGHPPSLP-TMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHHTSSSCCHH-HHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHccCCHH-HHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 44577777777 6654 3444444599999988 899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
.|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+..+...
T Consensus 278 ~g~~~~v~~LL~~Gad~~~------~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGA------RDSEGRDPLTIAMETANADIVTLLRLAKMRE 327 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred cCcHHHHHHHHHCcCCCCC------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 9999999999999999998 8899999999999999999999999988543
No 90
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.71 E-value=1.8e-17 Score=177.97 Aligned_cols=129 Identities=12% Similarity=0.018 Sum_probs=77.6
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCC-CchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG-QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G-~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
.+.+||+.|+..++.. +++.|++ |++++..|..| .||||+|+..|+.+++++|++.|+++... ..|+||||+|+.
T Consensus 94 ~g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~ 170 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQ--TVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIK 170 (285)
T ss_dssp TSCCHHHHHHHTTCHH--HHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHH--HHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHH
Confidence 3555666666655544 3444443 66666666666 56666666666666666666666555221 156666666666
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH-HHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA-ADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~Tp-L~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
.|+.+++++|+++|++++. +|..|.|| ||+|+..|+.+++++|+++|++++..+
T Consensus 171 ~g~~~~v~~Ll~~gad~n~------~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 171 NGHVDMMILLLDYMTSTNT------NNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp TTCHHHHHHHHHHHHHTCT------TCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred cChHHHHHHHHHcCCCCCc------ccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 6666666666666666665 55666665 666666666666666666666655554
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.71 E-value=3.6e-18 Score=172.46 Aligned_cols=129 Identities=12% Similarity=0.003 Sum_probs=110.7
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCcccc-CCCCchHHHHHHcCCH----HHHHHHHHCCCCCccccCCCCcHHHHH
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYT----WAILLFSWSGLSLDFRDKYGWTALHWA 541 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~Ga~in~~D-~~G~T~LH~Aa~~G~~----~~v~~LL~~Ga~in~~D~~G~TpLh~A 541 (848)
...+++.++..|++.+ +...+..+ ++..+ ..|+||||+|+..|+. +++++||+.|+++|.+|..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~-~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYED-FLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHH-HHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHH-HHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 4568999999999885 33333334 45555 7899999999999985 489999999999999999999999999
Q ss_pred HHcCC------HHHHHHHHHcCCCCCCCCCCCCCCCCCC-CHHHHHHHcCC-----hHHHHHHHh-hhhhhccccc
Q 003098 542 AYYGR------EKMVVDLLSAGAKPNLVTDPTSQNPGGL-NAADIASKKGF-----DGLAAFLSE-QALVAQFNDM 604 (848)
Q Consensus 542 a~~G~------~eiv~~LL~~GA~in~~td~~~~d~~G~-TpL~lA~~~G~-----~~iv~lLle-~Ga~~~l~~~ 604 (848)
+..|+ .+++++|+++||++|. +|..|. ||||+|+..++ .+++++|++ +|++.+..+.
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~ 152 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITA------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK 152 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSS------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCT
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCc------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCC
Confidence 99997 6889999999999999 889999 99999999554 569999999 9999887765
No 92
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.71 E-value=9.5e-17 Score=179.00 Aligned_cols=129 Identities=16% Similarity=0.151 Sum_probs=112.3
Q ss_pred cccccchHHHHHHcCC--cHHHHHHHHHc-CCCCcc--------ccCCCCchHHHHHHcCCHHHHHHHHHCC-CCCcccc
Q 003098 464 LPEAKDSFFELTLKSK--LKEWLLERVVE-GSKTTE--------YDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRD 531 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~--l~e~Ll~~L~~-Ga~in~--------~D~~G~T~LH~Aa~~G~~~~v~~LL~~G-a~in~~D 531 (848)
...+.++|+.++..+. ..+ +++.|++ |++++. .|..|.||||+|+..|+.++|++|++.| +++|.+|
T Consensus 232 d~~g~t~L~~A~~~~~~~~~~-~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d 310 (373)
T 2fo1_E 232 DRNGMTALMIVAHNEGRDQVA-SAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD 310 (373)
T ss_dssp CTTSCCHHHHHHHSCSTTHHH-HHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCC
T ss_pred CCCCCCHHHHHHHhCCcchHH-HHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcC
Confidence 4567889999988874 334 4555555 999886 5778999999999999999999999775 9999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhh
Q 003098 532 KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 599 (848)
Q Consensus 532 ~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 599 (848)
..|+||||+|+..|+.++|++|+++|++++. +|..|.||||+|+.+|+.+++++|+++|++.
T Consensus 311 ~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~------~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 311 EDGKTPIMLAAQEGRIEVVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccC------CCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 9999999999999999999999999999998 8899999999999999999999999998763
No 93
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.71 E-value=1.5e-16 Score=167.64 Aligned_cols=136 Identities=24% Similarity=0.268 Sum_probs=98.2
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHc
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 544 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~ 544 (848)
.+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..
T Consensus 38 ~g~t~L~~A~~~g~~~--~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 38 GGWTPLHNAVQMSRED--IVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115 (285)
T ss_dssp TCCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHH--HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence 3556777777777655 4444444 778877788888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHcCCCCCCCCCC----CCCCCCCCCHHHHHHHcCChHHHHHHHhh-hhhhcccc
Q 003098 545 GREKMVVDLLSAGAKPNLVTDP----TSQNPGGLNAADIASKKGFDGLAAFLSEQ-ALVAQFND 603 (848)
Q Consensus 545 G~~eiv~~LL~~GA~in~~td~----~~~d~~G~TpL~lA~~~G~~~iv~lLle~-Ga~~~l~~ 603 (848)
|+.+++++|++.|++++..... ...+..|.||||+|+..|+.+++++|++. |++.+..+
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 179 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 179 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC
T ss_pred CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 8888888888888877762100 00156777888888888888888888876 76665543
No 94
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.70 E-value=5.5e-17 Score=177.46 Aligned_cols=130 Identities=18% Similarity=0.201 Sum_probs=116.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHH-c-CCCCccccCCCCchHHHHHHcCC----HHHHHHHHHCCCCCccccCCCCcHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVV-E-GSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDKYGWTALH 539 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~-~-Ga~in~~D~~G~T~LH~Aa~~G~----~~~v~~LL~~Ga~in~~D~~G~TpLh 539 (848)
.+.++|+.|+..++.. +++.|+ . |+++|..|..|.|+||+++..+. ..++++|+++|+++|.+|..|+||||
T Consensus 167 ~g~T~L~~A~~~g~~~--~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~ 244 (337)
T 4g8k_A 167 GGATALMDAAEKGHVE--VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 244 (337)
T ss_dssp CSCCHHHHHHHHTCHH--HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CCCcHHHHHHHCCCHH--HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 4678999999999876 566665 3 99999999999999999887654 46889999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 540 WAAYYGREKMVVDLLSA-GAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~-GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
+|+..|+.++++.|+.. |++++. +|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 245 ~a~~~~~~~~v~~Ll~~~~~~vn~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 245 LAVEKKHLGLVQRLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp HHHHTTCHHHHHHHHTSTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred HHHHhhhhHHHHHHHHhcCCcccC------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 99999999999999984 899988 88999999999999999999999999999886553
No 95
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.70 E-value=1.2e-16 Score=164.13 Aligned_cols=128 Identities=23% Similarity=0.238 Sum_probs=86.8
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCC-HHHHHHHHHCCCCCccccC-CCCcHHHHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-TWAILLFSWSGLSLDFRDK-YGWTALHWAA 542 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~-~~~v~~LL~~Ga~in~~D~-~G~TpLh~Aa 542 (848)
.+.++++.++..++.. +++.|++ |++++..|..|.||||+|+..++ ..++++|+..|++++..+. .|.||||+|+
T Consensus 108 ~g~t~l~~A~~~~~~~--~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~ 185 (240)
T 3eu9_A 108 EGCSCIHLAAQFGHTS--IVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAV 185 (240)
T ss_dssp TSCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHH
T ss_pred CCCCHHHHHHHcCHHH--HHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHH
Confidence 4556666666666554 4444444 77777777777777777776555 6677777777777777775 6777777777
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcc
Q 003098 543 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 601 (848)
Q Consensus 543 ~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l 601 (848)
..|+.+++++|+++|++++. +|..|.|||++|+..|+.+++++|+++++...+
T Consensus 186 ~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 186 LAGNTTVISLLLEAGANVDA------QNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238 (240)
T ss_dssp HHTCHHHHHHHHHHTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHHC-----
T ss_pred HcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCc
Confidence 77777777777777777766 667777777777777777777777777766543
No 96
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.69 E-value=1.9e-16 Score=179.35 Aligned_cols=131 Identities=19% Similarity=0.225 Sum_probs=91.8
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+..|++++..+..|+||||+|+.
T Consensus 78 ~~g~t~L~~A~~~g~~~--~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~ 155 (437)
T 1n11_A 78 KDDQTPLHCAARIGHTN--MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAK 155 (437)
T ss_dssp TTSCCHHHHHHHHTCHH--HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHH--HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHH
Confidence 44566777777666654 4444444 77777777777777777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
.|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 156 ~g~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 209 (437)
T 1n11_A 156 YGKVRVAELLLERDAHPNA------AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA 209 (437)
T ss_dssp TTCHHHHHHHHHTTCCTTC------CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCC
T ss_pred cCCHHHHHHHHhCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcC
Confidence 7777777777777777666 56677777777777777777777777776655443
No 97
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.69 E-value=2.5e-16 Score=161.90 Aligned_cols=130 Identities=22% Similarity=0.285 Sum_probs=89.5
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccC-CCCcHHHHHHH
Q 003098 466 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAY 543 (848)
Q Consensus 466 ~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~-~G~TpLh~Aa~ 543 (848)
.+.++++.|+..+++. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+.
T Consensus 8 ~~~~~l~~A~~~g~~~--~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYE--RCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp GGGCCHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred ccchHHHHHHHcCChH--HHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 3456677776666655 3344443 777777777777777777777777777777777777665443 37777777777
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
.|+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++.+..+
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 139 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSL------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD 139 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC
Confidence 7777777777777777766 56777777777777777777777777776655444
No 98
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.69 E-value=1e-16 Score=178.76 Aligned_cols=133 Identities=17% Similarity=0.226 Sum_probs=117.6
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-C---CCCccccCCCCchHHHHHHcC---CHHHHHHHHHCCCCCcc-------
Q 003098 464 LPEAKDSFFELTLKSKLKEWLLERVVE-G---SKTTEYDVHGQGVIHLCAMLG---YTWAILLFSWSGLSLDF------- 529 (848)
Q Consensus 464 ~~~~~~~ll~aa~~~~l~e~Ll~~L~~-G---a~in~~D~~G~T~LH~Aa~~G---~~~~v~~LL~~Ga~in~------- 529 (848)
...+.++|+.|+..++.. +++.|++ | ++++..|..|.||||+|+..| +.+++++|++.|++++.
T Consensus 196 ~~~g~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 273 (373)
T 2fo1_E 196 NKSERSALHQAAANRDFG--MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273 (373)
T ss_dssp CTTCCCHHHHHHHTTCHH--HHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS
T ss_pred CCCCCCHHHHHHHCCCHH--HHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccC
Confidence 345778999999888776 6666666 5 799999999999999999998 89999999999999986
Q ss_pred -ccCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 530 -RDKYGWTALHWAAYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 530 -~D~~G~TpLh~Aa~~G~~eiv~~LL~~G-A~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
.|..|+||||+|+..|+.++|++|++.| ++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~------~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK------QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 6778999999999999999999999876 99888 889999999999999999999999999998876654
No 99
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.68 E-value=7.7e-17 Score=152.97 Aligned_cols=102 Identities=22% Similarity=0.204 Sum_probs=94.6
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 003098 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA 576 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~Tp 576 (848)
....|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++. +|..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA------VDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCH
Confidence 345678999999999999999999999999999999999999999999999999999999999998 88999999
Q ss_pred HHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 577 ADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 577 L~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
||+|+..|+.+++++|+++|++.+..+.
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 111 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADVNAQDK 111 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcCcCC
Confidence 9999999999999999999988765543
No 100
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=1.3e-16 Score=146.19 Aligned_cols=93 Identities=29% Similarity=0.272 Sum_probs=86.0
Q ss_pred CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 003098 494 TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGG 573 (848)
Q Consensus 494 in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G 573 (848)
+...|.+|.|+||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++. +|..|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g 90 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA------QDKFG 90 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTS
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cccCC
Confidence 445788999999999999999999999999999999999999999999999999999999999999998 88999
Q ss_pred CCHHHHHHHcCChHHHHHH
Q 003098 574 LNAADIASKKGFDGLAAFL 592 (848)
Q Consensus 574 ~TpL~lA~~~G~~~iv~lL 592 (848)
.||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999987
No 101
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=166.60 Aligned_cols=109 Identities=16% Similarity=0.031 Sum_probs=97.9
Q ss_pred HcCCCCcc---ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 003098 489 VEGSKTTE---YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTD 565 (848)
Q Consensus 489 ~~Ga~in~---~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td 565 (848)
..|++++. .+..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~--- 82 (229)
T 2vge_A 6 RKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS--- 82 (229)
T ss_dssp ----CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---
T ss_pred ccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---
Confidence 34777665 456678889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCHHHHHHHcCChHHHHHHHhhhhhhcccc
Q 003098 566 PTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 566 ~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
+|..|.||||+|+..|+.+++++|+++|++.+..+
T Consensus 83 ---~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 83 ---PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp ---CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 88999999999999999999999999999887653
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.66 E-value=1.1e-16 Score=164.58 Aligned_cols=103 Identities=22% Similarity=0.196 Sum_probs=97.5
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCC
Q 003098 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSA-GAKPNLVTDPTSQNPGGLN 575 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~-GA~in~~td~~~~d~~G~T 575 (848)
.|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+||..|+.++|++|++. |++++. +|..|.|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------~d~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------QNKLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------CCTTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------cCCCCCC
Confidence 467899999999999999999999999999999999999999999999999999999998 999998 8899999
Q ss_pred HHHHHHHcCChHHHHHHHhhhhhhcccccc
Q 003098 576 AADIASKKGFDGLAAFLSEQALVAQFNDMT 605 (848)
Q Consensus 576 pL~lA~~~G~~~iv~lLle~Ga~~~l~~~~ 605 (848)
|||+|+..|+.+++++|+++|++.+..+..
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 172 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGARTDLRNIE 172 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSCCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCC
Confidence 999999999999999999999998776653
No 103
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.66 E-value=3.6e-16 Score=144.46 Aligned_cols=98 Identities=30% Similarity=0.368 Sum_probs=93.3
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 003098 500 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADI 579 (848)
Q Consensus 500 ~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~l 579 (848)
+|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++.|++++. +|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCcHHHH
Confidence 589999999999999999999999999999999999999999999999999999999999988 78999999999
Q ss_pred HHHcCChHHHHHHHhhhhhhcccc
Q 003098 580 ASKKGFDGLAAFLSEQALVAQFND 603 (848)
Q Consensus 580 A~~~G~~~iv~lLle~Ga~~~l~~ 603 (848)
|+..|+.+++++|+++|++.+..+
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~~~~~ 98 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADVNAKD 98 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcChHHHHHHHHHcCCCCcccC
Confidence 999999999999999998876544
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.66 E-value=4.6e-16 Score=137.70 Aligned_cols=91 Identities=29% Similarity=0.376 Sum_probs=84.1
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcC
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 545 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G 545 (848)
+.++|+.++..++.. +++.|++ |+++|..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~--~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLE--VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHH--HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 678999999998876 5555555 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCC
Q 003098 546 REKMVVDLLSAGAK 559 (848)
Q Consensus 546 ~~eiv~~LL~~GA~ 559 (848)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999985
No 105
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.65 E-value=1.5e-16 Score=154.68 Aligned_cols=103 Identities=18% Similarity=0.213 Sum_probs=94.2
Q ss_pred ccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCC
Q 003098 495 TEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGL 574 (848)
Q Consensus 495 n~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~ 574 (848)
+..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+ .|+.+++++|+++|++++. +|..|.
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~------~d~~g~ 78 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------ADPATL 78 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC------CCTTTC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC------cCCCCC
Confidence 446788999999999999999999999999999999999999999985 9999999999999999998 889999
Q ss_pred C-HHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 575 N-AADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 575 T-pL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
| |||+|+..|+.+++++|+++|++.+..+.
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAGARLDVRDA 109 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT
T ss_pred cHHHHHHHHCCCHHHHHHHHHcCCCCcccCC
Confidence 9 99999999999999999999998876653
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.65 E-value=1.6e-16 Score=158.67 Aligned_cols=101 Identities=24% Similarity=0.137 Sum_probs=94.9
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCC
Q 003098 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLN 575 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d-~~G~T 575 (848)
.+..|.||||+|+..|+.++++.|+. |+++|.+|..|+||||+|+..|+.+++++|+++|++++. +| ..|.|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~~g~t 112 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------RDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCSSSSCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCC
Confidence 45678999999999999999999999 999999999999999999999999999999999999988 66 88999
Q ss_pred HHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 576 AADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 576 pL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|||+|+..|+.+++++|+++|++.+..+.
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 141 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIEVEDE 141 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcCCCC
Confidence 99999999999999999999999876654
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.62 E-value=3.4e-16 Score=164.23 Aligned_cols=101 Identities=24% Similarity=0.137 Sum_probs=94.6
Q ss_pred ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCC
Q 003098 497 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLN 575 (848)
Q Consensus 497 ~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d-~~G~T 575 (848)
.+..|.||||+|+..|+.++++.|+. |+++|.+|..|+||||+||..|+.++|++|+++|++++. +| ..|.|
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~g~t 113 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------RDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCSSSCCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------CCCCCCCC
Confidence 34578999999999999999999999 999999999999999999999999999999999999998 56 78999
Q ss_pred HHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 576 AADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 576 pL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
|||+|+..|+.+++++|+++|++.+..+.
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~ 142 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEVEDE 142 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 99999999999999999999999876654
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.61 E-value=6.6e-16 Score=141.79 Aligned_cols=105 Identities=20% Similarity=0.247 Sum_probs=94.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
..+.++|+.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 7 ~~g~t~L~~A~~~~~~~--~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAE--EVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSSCCHHHHHHHHTCHH--HHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 45788999999999876 5666666 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 003098 544 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAA 577 (848)
Q Consensus 544 ~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL 577 (848)
.|+.+++++|+++|++++. ++..|.||-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~------~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNA------RSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHH------HSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCc------CCccccccc
Confidence 9999999999999999998 778888874
No 109
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.61 E-value=6e-15 Score=183.72 Aligned_cols=123 Identities=27% Similarity=0.383 Sum_probs=106.9
Q ss_pred HHhhhHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHHHH----HHHHHHHHHHHHHHHH
Q 003098 640 AYRTAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMA----AAARIQHRFRSWKVRK 715 (848)
Q Consensus 640 a~r~~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~----aA~~IQa~~Rg~~~Rk 715 (848)
.|++...|++.||++|||+++|+++..+ ++..||++||++||+|..|+.+. +++.||++|||+.+|+
T Consensus 786 ~~~~~r~aai~IQ~~~Rg~~aR~~~~~l---------r~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr 856 (1080)
T 2dfs_A 786 KYMRMRRAAITIQRYVRGHQARCYATFL---------RRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRN 856 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHHhhccccc---------ccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3666788999999999999999988543 46789999999999999998765 8999999999999999
Q ss_pred HHHHHHH--HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 003098 716 EFLNMRR--QAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRV 772 (848)
Q Consensus 716 ~~~~~r~--aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~r~~r~~~r~lr~~~~ 772 (848)
.|..++. +++.||++|||+.+|+.|++.+.+++.||+.||++ .+|+.++.++.++.
T Consensus 857 ~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~R~~-laRr~~~~Lk~ear 914 (1080)
T 2dfs_A 857 KYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRM-MAKRELKKLKIEAR 914 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHHHHH-HHHHHTTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 9988775 89999999999999999999999999999999999 77888888876653
No 110
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.60 E-value=3.9e-16 Score=170.99 Aligned_cols=120 Identities=14% Similarity=0.052 Sum_probs=103.3
Q ss_pred HHHHcCCcHHHHHHHHHc-CCCCcc-ccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHHcCC---H
Q 003098 473 ELTLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR---E 547 (848)
Q Consensus 473 ~aa~~~~l~e~Ll~~L~~-Ga~in~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~~G~---~ 547 (848)
+.+..+.+.+ +++.|.. |+++|. .|..|.||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+ .
T Consensus 102 ~~a~~~~~~~-~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 102 HVSFDSLLQE-VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp --CHHHHHHH-HHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HHHHHhhHHH-HHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 3344444443 5555555 999999 89999999999999999999999999999999999999999999999999 6
Q ss_pred HHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHH----cCChHHHHHHHhhhhhh
Q 003098 548 KMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASK----KGFDGLAAFLSEQALVA 599 (848)
Q Consensus 548 eiv~~LL~~G-A~in~~td~~~~d~~G~TpL~lA~~----~G~~~iv~lLle~Ga~~ 599 (848)
+++..|++.+ ++++. +|..|.||||+|+. .|+.+++++|++.++..
T Consensus 181 ~~~~~ll~~~~~~~~~------~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~ 231 (327)
T 1sw6_A 181 GTFEALLDYLYPCLIL------EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 231 (327)
T ss_dssp TCHHHHHHHHGGGGGE------ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccC------CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence 8888888876 66776 88999999999999 89999999999997643
No 111
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.54 E-value=8.2e-15 Score=159.01 Aligned_cols=109 Identities=14% Similarity=0.035 Sum_probs=90.3
Q ss_pred cccccchHHHHHHc---CCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHH
Q 003098 464 LPEAKDSFFELTLK---SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 539 (848)
Q Consensus 464 ~~~~~~~ll~aa~~---~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh 539 (848)
...+.++|+.|+.. ++.. +++.|++ |+++|..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~--iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLP--LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 264 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHH--HHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHH
T ss_pred CCCCccHHHHHHHhcccCcHH--HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 34577899999886 4443 5566665 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCh
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD 586 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~ 586 (848)
+|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 265 ~A~~~~~~~iv~~Ll~~ga~------------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 265 IARKKHHKECEELLEQAQAG------------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTCHHHHHHHHHHHHH------------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHhcCC------------CCCChhHHHHhcCCc
Confidence 99999999999999999876 478999999999874
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.47 E-value=4.4e-15 Score=166.26 Aligned_cols=125 Identities=12% Similarity=0.077 Sum_probs=99.4
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCC---CccccCCCCchHHHHHHcCCHHHHHHHHHCCCCC---ccccCCCCcHHH
Q 003098 467 AKDSFFELTLKSKLKEWLLERVVE-GSK---TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSL---DFRDKYGWTALH 539 (848)
Q Consensus 467 ~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~---in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~i---n~~D~~G~TpLh 539 (848)
..++|+.|+..|+.. +++.|++ |+. .+..|..|.||||+||..|+.++|++|+++|+++ +..+.+ +||||
T Consensus 92 ~~T~Lh~Aa~~G~~e--~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 92 SEVICFVAAITGCSS--ALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp HHHHHHHHHHHCCHH--HHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred cCCHHHHHHHcCCHH--HHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence 458999999999887 6666666 662 2235567889999999999999999999999762 333333 99999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH-HcCChHHHHHHHhhhhh
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS-KKGFDGLAAFLSEQALV 598 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~-~~G~~~iv~lLle~Ga~ 598 (848)
+||..|+.++|++|+++|++++.. ..|..|.||||+|+ ..|+.+++++|++.|+.
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~----~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATA----MIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHH----HHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchh----ccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 999999999999999999986530 03567999999999 99999999999998864
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.46 E-value=9e-14 Score=155.11 Aligned_cols=101 Identities=17% Similarity=0.086 Sum_probs=94.3
Q ss_pred cCCCCchHHHHHHc-CCHHHHHHHHHCCCCCcccc--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCC
Q 003098 498 DVHGQGVIHLCAML-GYTWAILLFSWSGLSLDFRD--KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGL 574 (848)
Q Consensus 498 D~~G~T~LH~Aa~~-G~~~~v~~LL~~Ga~in~~D--~~G~TpLh~Aa~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~ 574 (848)
+..+.|+||+|+.. |+.++++.|+..|+++|..| ..|+||||+|+..|+.++|++|+++|++++. .|..|.
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~------~d~~G~ 269 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ------ADSAGR 269 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSC
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------CCCCCC
Confidence 34567999999999 99999999999999999998 8999999999999999999999999999998 889999
Q ss_pred CHHHHHHHcCChHHHHHHHhhhhhhccccc
Q 003098 575 NAADIASKKGFDGLAAFLSEQALVAQFNDM 604 (848)
Q Consensus 575 TpL~lA~~~G~~~iv~lLle~Ga~~~l~~~ 604 (848)
||||+|+..|+.+++++|+++|++.+..+.
T Consensus 270 TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~ 299 (368)
T 3jue_A 270 GPLHHATILGHTGLACLFLKRGADLGARDS 299 (368)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHcCcHHHHHHHHHCcCCCCCcCC
Confidence 999999999999999999999999876654
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.44 E-value=5.8e-15 Score=165.25 Aligned_cols=143 Identities=14% Similarity=0.043 Sum_probs=114.2
Q ss_pred CCHHHHHHHhCCCCC-------CcccccchHHHHHHcCCcHHHHHHHHHc-CCCC---ccccCCCCchHHHHHHcCCHHH
Q 003098 448 NSWAYLFKSVGDKRT-------SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKT---TEYDVHGQGVIHLCAMLGYTWA 516 (848)
Q Consensus 448 ~~~~~li~~l~~~~~-------~~~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~i---n~~D~~G~T~LH~Aa~~G~~~~ 516 (848)
.+..++++.+...+. ....+.+||+.||..|+.. +++.|++ |+++ +..+.+ .||||+||..|+.++
T Consensus 102 ~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~e--iv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~ei 178 (376)
T 2aja_A 102 TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLH--VLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHV 178 (376)
T ss_dssp HCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHH--HHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHH--HHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHH
Confidence 344566666654433 1234567999999999877 6666666 8653 222223 899999999999999
Q ss_pred HHHHHHCCCCCcc--ccCCCCcHHHHHH-HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Q 003098 517 ILLFSWSGLSLDF--RDKYGWTALHWAA-YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 593 (848)
Q Consensus 517 v~~LL~~Ga~in~--~D~~G~TpLh~Aa-~~G~~eiv~~LL~~GA~in~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 593 (848)
|++|+++|++++. .|..|+||||+|+ ..|+.++|++|++.|+ .|.|||++|+..|+.+++++|+
T Consensus 179 v~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------------~~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 179 LNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------------MLAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp HHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------------HHHHHHHCTTTTTTTTHHHHHH
T ss_pred HHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------------ccchHHHHHHHCCCHHHHHHHH
Confidence 9999999999988 8999999999999 9999999999998763 2789999999999999999999
Q ss_pred hhhhhhccccccc
Q 003098 594 EQALVAQFNDMTL 606 (848)
Q Consensus 594 e~Ga~~~l~~~~l 606 (848)
++|++.+..+..+
T Consensus 246 ~~ga~~~~~~~~l 258 (376)
T 2aja_A 246 RHVNRLKEMHDAF 258 (376)
T ss_dssp HHHHHHHHHHTTT
T ss_pred hcCcccccccHHH
Confidence 9999887665544
No 115
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.44 E-value=2.7e-13 Score=157.13 Aligned_cols=97 Identities=15% Similarity=0.089 Sum_probs=84.2
Q ss_pred cccccchHHHHHH---cCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHH
Q 003098 464 LPEAKDSFFELTL---KSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 539 (848)
Q Consensus 464 ~~~~~~~ll~aa~---~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh 539 (848)
...+.++||.|+. .++.. +++.|++ |+++|..|..|+||||+||..|+.++|++||++|+++|.+|..|+||||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~--~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 245 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLP--LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 245 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHH--HHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHH
T ss_pred ccccchHHHHHHHhcccccHH--HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 3467889999976 55554 5566665 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Q 003098 540 WAAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 540 ~Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
+|+..|+.+++++|+++||+++.
T Consensus 246 ~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 246 IARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHcCCHHHHHHHHHhCCCCCC
Confidence 99999999999999999999876
No 116
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.43 E-value=3.2e-13 Score=144.78 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=86.5
Q ss_pred ccccchHHHHHHc---CCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHH
Q 003098 465 PEAKDSFFELTLK---SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 540 (848)
Q Consensus 465 ~~~~~~ll~aa~~---~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~ 540 (848)
..+.++||.|+.. ++.. +++.|++ |+++|..|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+
T Consensus 167 ~~g~t~Lh~A~~~~~~~~~~--~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 167 EPDETALHLAVRSVDRTSLH--IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp STTCBHHHHHHHHCCTTTHH--HHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cCCCCcchHHHHhcccchHH--HHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 4578999999998 4444 5566665 99999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCC
Q 003098 541 AAYYGREKMVVDLLSAGAKPNL 562 (848)
Q Consensus 541 Aa~~G~~eiv~~LL~~GA~in~ 562 (848)
|+..|+.+++++|+++|++...
T Consensus 245 A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 245 AKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp HHHTTCHHHHHHHHHHHTTCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999987543
No 117
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.42 E-value=4.1e-13 Score=122.75 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=79.2
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCccccCCCCchHHHHHHcCCHHHHHHHHHCCCCCccccCCCCcHHHHHHH
Q 003098 465 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 543 (848)
Q Consensus 465 ~~~~~~ll~aa~~~~l~e~Ll~~L~~-Ga~in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Ga~in~~D~~G~TpLh~Aa~ 543 (848)
.++.++|+.++..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 22 ~~g~t~L~~A~~~g~~~--~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDD--EVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp CCHHHHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CccchHHHHHHHcCCHH--HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 34778899999988876 4555555 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHH
Q 003098 544 YGREKMVVDL 553 (848)
Q Consensus 544 ~G~~eiv~~L 553 (848)
.|+.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 9999999987
No 118
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=98.90 E-value=2.6e-09 Score=99.02 Aligned_cols=84 Identities=20% Similarity=0.310 Sum_probs=73.2
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC-CCceeEEEEEeCCCC
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHK 373 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-~~G~Vpl~v~~~~~~ 373 (848)
...|+.++|+.|+..||+.|+|.|.+|.+ ++.|+||+..+-.++|....++|.+||+ .||.|+|++...+..
T Consensus 5 ~P~I~~i~P~eG~~~GG~~V~I~G~nF~~-------GlqV~FG~t~~w~e~itphairv~~PP~~~pG~V~VTl~~k~kq 77 (138)
T 3muj_A 5 TPCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 77 (138)
T ss_dssp CCEEEEEESSEEETTCCCEEEEEEESCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CCceeEecCCCCCccCCeEEEEeCCCccc-------CCEEEECCeeeeeeeecccceEEECCCCCCCCceEEEEeecCcc
Confidence 35899999999999999999999998855 7999999999988999999999999999 599999999887776
Q ss_pred Ccccc-cccccCC
Q 003098 374 PISQV-LNFEYRS 385 (848)
Q Consensus 374 ~~Sev-~~Fey~~ 385 (848)
.|... ..|.|..
T Consensus 78 f~~g~p~~F~Y~~ 90 (138)
T 3muj_A 78 FCKGAPGRFVYTA 90 (138)
T ss_dssp ECTTSCEEEEEEC
T ss_pred cccCCCceEEEec
Confidence 66543 5677754
No 119
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.84 E-value=8.3e-09 Score=83.53 Aligned_cols=49 Identities=39% Similarity=0.544 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 003098 697 KMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILW 745 (848)
Q Consensus 697 ~~~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~ 745 (848)
...+|+.||+.||||..|+.|..++.+++.||++|||+.+|+.|..++.
T Consensus 4 ~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~ 52 (58)
T 2ix7_C 4 LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999988765
No 120
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.65 E-value=4.9e-08 Score=75.75 Aligned_cols=42 Identities=24% Similarity=0.405 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhHHHHHHH
Q 003098 699 AAAARIQHRFRSWKVRKEFLNMRR--QAIKIQAAFRGFQVRKQY 740 (848)
Q Consensus 699 ~aA~~IQa~~Rg~~~Rk~~~~~r~--aai~IQa~~Rg~~~Rk~y 740 (848)
.+++.||+.|||++.|+.|..++. ++++||++|||+.+|+.|
T Consensus 4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 478888899999999999888887 899999999999999877
No 121
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=98.56 E-value=2.1e-07 Score=97.93 Aligned_cols=84 Identities=19% Similarity=0.298 Sum_probs=73.6
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC-CCceeEEEEEeCCCC
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHK 373 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-~~G~Vpl~v~~~~~~ 373 (848)
.+.|+-++|..|+..||+.|+|.|.+|.+ ++.|+||...+-.++|.+..|+|++||+ .||.|.+++...+..
T Consensus 231 tP~IkaIsPnEG~~tGG~tV~IiGenFf~-------GLQVvFGtt~vWselITphAIRV~tPPr~~PGvVdVTLs~ksKq 303 (402)
T 3mlp_A 231 TPCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 303 (402)
T ss_dssp CCEEEECSSCEECTTCCCEEEEEEECCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CcceEEecCCCCCccCCeEEEEeCCCccc-------CCEEEEccEeeeeEEecccceEEECCCCCCCCceEEEEEecCcc
Confidence 45899999999999999999999998855 7999999999999999999999999999 599999999998777
Q ss_pred Cccc-ccccccCC
Q 003098 374 PISQ-VLNFEYRS 385 (848)
Q Consensus 374 ~~Se-v~~Fey~~ 385 (848)
.|-. ...|.|..
T Consensus 304 f~kg~pgrF~YtA 316 (402)
T 3mlp_A 304 FCKGTPGRFIYTA 316 (402)
T ss_dssp ESTTSCEEEEEC-
T ss_pred cccCCCCceeeec
Confidence 6653 45677765
No 122
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.47 E-value=4.3e-07 Score=73.39 Aligned_cols=49 Identities=22% Similarity=0.311 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 003098 720 MRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQV 769 (848)
Q Consensus 720 ~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R~~r~~r~~~r~lr~ 769 (848)
+..++++||++||||.+|+.|..++.+++.||++||++ ..|+.++.++.
T Consensus 4 ~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~-~aR~~~~~~r~ 52 (58)
T 2ix7_C 4 LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGY-QARCYAKFLRR 52 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 45799999999999999999999999999999999999 66666655543
No 123
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.33 E-value=8.7e-07 Score=68.65 Aligned_cols=42 Identities=14% Similarity=0.277 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Q 003098 720 MRRQAIKIQAAFRGFQVRKQYGKILW--SVGVLEKAILRWRLKR 761 (848)
Q Consensus 720 ~r~aai~IQa~~Rg~~~Rk~y~~~~~--aa~~IQ~~~R~~r~~r 761 (848)
++.+++.||++|||+++|+.|..++. ++++||+.||+|..++
T Consensus 2 ~r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk 45 (48)
T 1n2d_C 2 ISQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRA 45 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46789999999999999999999888 9999999999994433
No 124
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=97.95 E-value=2e-05 Score=70.76 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=60.0
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcc-eEEEcCCeecc--eeeeeCCeeeeecCCCC--CceeEEEEEe
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSN-MFCVCGEVRVP--AEFVQAGVYRCFLPPHS--PGLFLLYMSL 369 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~-~~c~FG~~~vp--a~~~~~gvl~C~~Pph~--~G~Vpl~v~~ 369 (848)
...|++|+|..|+. ||+|+|.|.+|-.. ... ..+.+|+++-. ++...+..|+|.++|+. .|.|.|.|..
T Consensus 7 ~P~It~i~P~~Gp~--GT~vTI~G~nlg~~----~sdv~~V~vgg~~C~~~~~~~s~~~IvC~~~~~~~~~g~V~V~v~~ 80 (99)
T 1uad_C 7 PPLVTGISPNEGIP--WTKVTIRGENLGTG----PTDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKS 80 (99)
T ss_dssp CCEEEEEESSEEST--TCEEEEEEECSCSS----GGGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETT
T ss_pred CCEEEEEECCCcCC--CCEEEEEEEeCCCC----cccceEEEECCEEceEeeceeecCEEEEEeCCCCCcceeEEEEECC
Confidence 56899999999988 79999999999552 223 36999997632 35678889999999885 5666666521
Q ss_pred CCCCCcccccccccCCC
Q 003098 370 DGHKPISQVLNFEYRSP 386 (848)
Q Consensus 370 ~~~~~~Sev~~Fey~~~ 386 (848)
++...|. ..|+|.++
T Consensus 81 -~~~~~s~-~~F~y~~P 95 (99)
T 1uad_C 81 -GGRGTST-VSFKLLKP 95 (99)
T ss_dssp -TEECEES-SCCEECCC
T ss_pred -CCcEEec-ceEEEeCc
Confidence 2223343 37888754
No 125
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=7.2e-05 Score=84.72 Aligned_cols=89 Identities=18% Similarity=0.165 Sum_probs=72.8
Q ss_pred CCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCC-ceeEEEEEeC
Q 003098 292 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP-GLFLLYMSLD 370 (848)
Q Consensus 292 ~~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~-G~Vpl~v~~~ 370 (848)
+.+...|++|+|..|. .|++|+|.|++|-.. .....++||+.+.....+.+..|.|.+|++.+ |.++|.|...
T Consensus 14 ~~~p~~i~~~~P~~g~--~~~~~~i~G~nfg~~----~~~~~v~~~~~~~~v~~~~~~~i~~~vp~~~~~g~~~v~~~~~ 87 (430)
T 3tc9_A 14 PNKPVVISEFSPKEGG--LGTRMLLYGENFGSD----ISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILND 87 (430)
T ss_dssp TTSCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEEECT
T ss_pred CCCCCEEEEEcCCCCC--CCCEEEEEEEcCCCC----ccceEEEECCEEEEEEEECCCEEEEEeCCCCCCccEEEEEecC
Confidence 3555689999999997 799999999999662 56789999999888778999999999999987 9999999876
Q ss_pred CCC---CcccccccccCCC
Q 003098 371 GHK---PISQVLNFEYRSP 386 (848)
Q Consensus 371 ~~~---~~Sev~~Fey~~~ 386 (848)
+.. ...-...|+|..+
T Consensus 88 ~~~~~~~~~~~~~F~y~~~ 106 (430)
T 3tc9_A 88 EGEEIANTEANEKFVYQKK 106 (430)
T ss_dssp TSCEEEEEECSSCCEECCC
T ss_pred CcceeeEEEEeeEEEEEEE
Confidence 632 0122478999774
No 126
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.53 E-value=0.00011 Score=84.33 Aligned_cols=88 Identities=18% Similarity=0.216 Sum_probs=70.9
Q ss_pred CCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCC-ceeEEEEEeC
Q 003098 292 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP-GLFLLYMSLD 370 (848)
Q Consensus 292 ~~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~-G~Vpl~v~~~ 370 (848)
+.+...|++|+|..|.. |++|+|.|++|... .+...|.||+++....-+.+..|.|.+|.+.. |.++|.|...
T Consensus 14 p~~p~~i~~~~P~~G~~--~t~~~I~G~nFg~d----~~~i~V~~~~~~a~v~~~~~~~i~~~vp~~~~~G~~~v~v~~~ 87 (496)
T 3kya_A 14 PSKPVAISDFTPKEGGA--YQKLLIYGENFGTD----VSKVKVKIGGKDAIVINVKSTYVYCFVPSGAFSGEIEITVGEG 87 (496)
T ss_dssp TTSCCEEEEEECSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEESCG
T ss_pred CCCCcEEEEEcCCCCCC--CCEEEEEeecCCCC----cceeEEEECCEEEEEEEECCCEEEEEECCCCCCCcEEEEEEec
Confidence 45566899999999977 89999999999762 56899999998877667889999999999975 9999999765
Q ss_pred CC--CCcccccccccCCC
Q 003098 371 GH--KPISQVLNFEYRSP 386 (848)
Q Consensus 371 ~~--~~~Sev~~Fey~~~ 386 (848)
.+ .+.+ ...|+|..+
T Consensus 88 ~~~~~~~~-~~~F~Y~~~ 104 (496)
T 3kya_A 88 ENAVTTTA-STTFSYEKK 104 (496)
T ss_dssp GGCEEEEC-SSCCEECCC
T ss_pred CCceEEEe-cceEEEEEE
Confidence 42 1222 368998763
No 127
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.49 E-value=8.8e-05 Score=89.32 Aligned_cols=94 Identities=16% Similarity=0.183 Sum_probs=61.0
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCccc--CCCcceEEEcCCeecce--eeeeCCeeeeecCCCCCceeEEEEEeC
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLH--LSKSNMFCVCGEVRVPA--EFVQAGVYRCFLPPHSPGLFLLYMSLD 370 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~--~~~~~~~c~FG~~~vpa--~~~~~gvl~C~~Pph~~G~Vpl~v~~~ 370 (848)
.+.|+.|+|..||..|||.|||+|.+|..... .......|.||+++... ..+.+..|+|.+||..+|.+++.|...
T Consensus 541 ~P~ItsI~P~~Gp~~GGT~vTI~G~nf~~~~~~~~~~~~~~V~igg~~C~~~~~~~s~t~I~C~tp~~~~~~~~v~V~v~ 620 (727)
T 2uzx_B 541 LPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGPAMNKHFNMSIIIS 620 (727)
T ss_dssp CCEEEEEESSBCCSSCCCEEEEEEECCCEEETTEEESTTCEEEETTEECEECGGGCCSSEEEEECCC-----CCCEEEEE
T ss_pred CCEEeccCCCcccCCCCEEEEEEEecCCCCcccccCCcccEEEECCCccceeeeeccCCEEEEEeCCCCCCCccEEEEEe
Confidence 57899999999999999999999999864100 00135789999975433 245678899999998655444444433
Q ss_pred CCCCcccccccccCCCCC
Q 003098 371 GHKPISQVLNFEYRSPQL 388 (848)
Q Consensus 371 ~~~~~Sev~~Fey~~~~~ 388 (848)
++...+....|+|..|.+
T Consensus 621 ~~~~~~~~~~FtY~~P~I 638 (727)
T 2uzx_B 621 NGHGTTQYSTFSYVDPVI 638 (727)
T ss_dssp CSSCEEEEECCBCCCC--
T ss_pred CCcceeccccccccccee
Confidence 333234456799975443
No 128
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.29 E-value=0.00042 Score=77.75 Aligned_cols=88 Identities=17% Similarity=0.228 Sum_probs=71.5
Q ss_pred CCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC----eecceeeeeCCeeeeecCCCCCceeEEEE
Q 003098 292 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE----VRVPAEFVQAGVYRCFLPPHSPGLFLLYM 367 (848)
Q Consensus 292 ~~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~----~~vpa~~~~~gvl~C~~Pph~~G~Vpl~v 367 (848)
+.+...|++|+|..|. .|++|+|.|++|-.. .+...|+||+ .+.....+.+..|.|++|.+.+|.+++.|
T Consensus 14 ~~~~~~~~~~~p~~g~--~~~~~~i~g~nfg~~----~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~vp~~~~g~~~i~v 87 (409)
T 3hrp_A 14 PNQPVTVESFMPVEGK--LREKVIVKGSNFGTD----KSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKV 87 (409)
T ss_dssp TTSCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEEECSSCEEEEEEEEEETTEEEEECCSCCSEEEEEEE
T ss_pred CCCCcEEEEEcCCCCC--CCcEEEEEeEcCCCC----ccceEEEECCcccceEEEEEEECCCEEEEEECCCCCCcEEEEE
Confidence 4556689999999986 799999999999762 5688999999 76666678899999999999999999999
Q ss_pred EeCCCCCcccccccccCCC
Q 003098 368 SLDGHKPISQVLNFEYRSP 386 (848)
Q Consensus 368 ~~~~~~~~Sev~~Fey~~~ 386 (848)
.-.+..+ .-...|.|..+
T Consensus 88 ~~~~~~~-~~~~~F~y~~~ 105 (409)
T 3hrp_A 88 IVDGKEV-TTDGTFKYEQA 105 (409)
T ss_dssp EETTEEE-ECSSCEEECCC
T ss_pred EECCeeE-EEeeeEEEecc
Confidence 8876532 23456888663
No 129
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.22 E-value=0.00075 Score=76.45 Aligned_cols=89 Identities=16% Similarity=0.155 Sum_probs=70.2
Q ss_pred CCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCCC-ceeEEEEEeC
Q 003098 292 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP-GLFLLYMSLD 370 (848)
Q Consensus 292 ~~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~~-G~Vpl~v~~~ 370 (848)
+.+...|++|+|.+|.. |++|+|.|.||... .....+.||+.+....-+.+..|.|.+|+... |.+.|.|...
T Consensus 16 ~~~p~~i~~~~P~~g~~--~~~~~i~G~nfg~~----~~~~~v~~~~~~a~v~~~~~~~i~~~vp~~~~~g~~~v~v~~~ 89 (433)
T 4hw6_A 16 PKEEIVVEKFLPTEGRK--GTRVVVYGRNFGND----VSKVKVTIGGYPAKVINVKGESLLCICPSKAYEGDVKVSVVGD 89 (433)
T ss_dssp TTSCCEEEEEESSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEEEEEEECSSEEEEECCTTCTTCCEEEEEECT
T ss_pred CCCCCEEEEECCCCCCC--CCEEEEEeECCCCC----cceeEEEECCEEEEEEEeCCCEEEEEeCCCCCCCCEEEEEecC
Confidence 45566899999999965 99999999999762 56899999998877667888999999999964 9999998776
Q ss_pred CCC---CcccccccccCCC
Q 003098 371 GHK---PISQVLNFEYRSP 386 (848)
Q Consensus 371 ~~~---~~Sev~~Fey~~~ 386 (848)
+.. ...-...|+|..+
T Consensus 90 ~~~~~~~~~~~~~F~y~~~ 108 (433)
T 4hw6_A 90 DEAELKSGVCEAKFDYQYN 108 (433)
T ss_dssp TSCEEEEEECSSCCEECCC
T ss_pred CcceeeEEEeeeEEEEEee
Confidence 531 1222467888764
No 130
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.12 E-value=7e-05 Score=90.18 Aligned_cols=73 Identities=18% Similarity=0.272 Sum_probs=1.3
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCCC-CceeEEEEEeCCC
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGH 372 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph~-~G~Vpl~v~~~~~ 372 (848)
.+.|+.|+|.+|+..||+.|+|+|.+|.. .....|.||+.+.....+++..|+|.+||.. +|.++|.|.-++.
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~-----~~~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg~ 708 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNS-----GNSRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDLA 708 (727)
T ss_dssp CC-----------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCC-----CCceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECCE
Confidence 67799999999999999999999999965 3457899999766556688899999999995 8999999988765
No 131
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.04 E-value=0.0015 Score=59.36 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=64.9
Q ss_pred CCCCcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC------------eecceeeeeCCeeeeecCCC
Q 003098 291 VPEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE------------VRVPAEFVQAGVYRCFLPPH 358 (848)
Q Consensus 291 ~~~~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~------------~~vpa~~~~~gvl~C~~Pph 358 (848)
+...++.|.++|-.-++..||-+|.|+|.++.. ...+.|=+ ....++..+...|+|.+||-
T Consensus 4 ~a~~~P~I~k~s~~s~~v~GG~Ev~Ll~~k~~k-------d~kV~F~E~~~dG~~~WE~~a~f~~d~~~q~aivf~tPpY 76 (114)
T 2yrp_A 4 GSSGLPQVEAYSPSACSVRGGEELVLTGSNFLP-------DSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEY 76 (114)
T ss_dssp CCCSCCEEEEEESSCEETTCCSEEEEEEESCCT-------TCEEEEECBCTTSCBCCCCBCCBCTTTCBTTEEEEECCCC
T ss_pred CCCCCCEEEEecCcccccCCCCEEEEEecccCC-------CCEEEEEEECCCCCcceEEeeEEChHHcccccEEEecCCC
Confidence 345689999999999999999999999988753 23454422 11224556778899999998
Q ss_pred ------CCceeEEEEEeCCCCCcccccccccCC
Q 003098 359 ------SPGLFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 359 ------~~G~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
.|=.|.|++ +.+...+|+...|+|..
T Consensus 77 ~~~~I~~pV~V~~~l-~~~~rk~Se~~~FtY~P 108 (114)
T 2yrp_A 77 SNKRVSRPVQVYFYV-SNGRRKRSPTQSFRFLP 108 (114)
T ss_dssp SCCSCSSCEEEEEEE-ECSSSCBCCCEEEEEEC
T ss_pred CCCccCCCeEEEEEE-CCCCCcccCCcCcEEec
Confidence 466677777 44434689999999976
No 132
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.02 E-value=0.0049 Score=78.33 Aligned_cols=47 Identities=17% Similarity=0.105 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHH
Q 003098 643 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKK 697 (848)
Q Consensus 643 ~~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~ 697 (848)
....+++.||++||||++|++|.+++ .+..|++.||+.||+|..++.
T Consensus 790 ~l~~~~~~iQ~~~Rg~l~R~~~~k~~--------~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 790 KITDVIIAFQAQCRGYLARKAFAKRQ--------QQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhh
Confidence 45678999999999999999997654 344677777877777776654
No 133
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.94 E-value=0.0022 Score=52.51 Aligned_cols=42 Identities=21% Similarity=0.353 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHH
Q 003098 699 AAAARIQHRFRSWKVRKEFLNM---RRQAIKIQAAFRGFQVRKQY 740 (848)
Q Consensus 699 ~aA~~IQa~~Rg~~~Rk~~~~~---r~aai~IQa~~Rg~~~Rk~y 740 (848)
..++.||+..||+.+|+.|.++ +.|+..||..+|+|..++.+
T Consensus 7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w 51 (64)
T 1wdc_A 7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 51 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4677788888888888888777 55777888888888777654
No 134
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.89 E-value=0.0016 Score=53.13 Aligned_cols=42 Identities=26% Similarity=0.338 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHH
Q 003098 699 AAAARIQHRFRSWKVRKEFLNM---RRQAIKIQAAFRGFQVRKQY 740 (848)
Q Consensus 699 ~aA~~IQa~~Rg~~~Rk~~~~~---r~aai~IQa~~Rg~~~Rk~y 740 (848)
..++.||+..||+.+|+.|.++ +.|+..||..+|+|..++.+
T Consensus 5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3567778788888888877776 55777788888877776644
No 135
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.88 E-value=0.0012 Score=80.26 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHHHH
Q 003098 697 KMAAAARIQHRFRSWKVRKEFLNM---RRQAIKIQAAFRGFQVRKQYGK 742 (848)
Q Consensus 697 ~~~aA~~IQa~~Rg~~~Rk~~~~~---r~aai~IQa~~Rg~~~Rk~y~~ 742 (848)
....++.||++||||++|++|+++ |.|+++||+.||+|.+||.|..
T Consensus 778 l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~w 826 (837)
T 1kk8_A 778 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQW 826 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHH
Confidence 344788888888888888888877 5678888888888888877643
No 136
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.66 E-value=0.0028 Score=51.72 Aligned_cols=45 Identities=24% Similarity=0.223 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHH
Q 003098 644 AAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK 696 (848)
Q Consensus 644 ~~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~ 696 (848)
....++.||+..||+++|+.|+++. .+..|+..||+.+|.|...+
T Consensus 3 l~~i~t~~Qa~~RG~l~R~~~~k~~--------~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 3 IGEIVKVVQAAARGWVERKHFRQAR--------EKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHhhc
Confidence 4567899999999999999997654 33456667777777666544
No 137
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.65 E-value=0.0051 Score=50.30 Aligned_cols=40 Identities=28% Similarity=0.594 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 003098 720 MRRQAIKIQAAFRGFQVRKQYGKI---LWSVGVLEKAILRWRL 759 (848)
Q Consensus 720 ~r~aai~IQa~~Rg~~~Rk~y~~~---~~aa~~IQ~~~R~~r~ 759 (848)
+...++.||+.+||+.+|+.|.++ +.++.+||+.+|.|..
T Consensus 5 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~ 47 (64)
T 1wdc_A 5 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLV 47 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456789999999999999999998 5588899999999933
No 138
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.62 E-value=0.016 Score=73.65 Aligned_cols=44 Identities=20% Similarity=0.261 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhHHHHHHHH
Q 003098 698 MAAAARIQHRFRSWKVRKEFLNMR---RQAIKIQAAFRGFQVRKQYG 741 (848)
Q Consensus 698 ~~aA~~IQa~~Rg~~~Rk~~~~~r---~aai~IQa~~Rg~~~Rk~y~ 741 (848)
...++.||++||||+.|+.|.+++ .+++.||+.||+|..|+.|.
T Consensus 792 ~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~~ 838 (1184)
T 1i84_S 792 TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWP 838 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 348899999999999999998875 58889999999999988754
No 139
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=95.87 E-value=0.014 Score=70.99 Aligned_cols=43 Identities=26% Similarity=0.517 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 003098 718 LNMRRQAIKIQAAFRGFQVRKQYGKI---LWSVGVLEKAILRWRLK 760 (848)
Q Consensus 718 ~~~r~aai~IQa~~Rg~~~Rk~y~~~---~~aa~~IQ~~~R~~r~~ 760 (848)
..+...++.||++||||++|++|+++ +.++++||+.||+|..+
T Consensus 776 ~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~ 821 (837)
T 1kk8_A 776 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 821 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556899999999999999999988 56899999999999443
No 140
>1ikn_C P50D, protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1
Probab=95.61 E-value=0.036 Score=50.78 Aligned_cols=85 Identities=11% Similarity=0.049 Sum_probs=61.3
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-------e----c-ceeeeeCCeeeeecCCC-----
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-------R----V-PAEFVQAGVYRCFLPPH----- 358 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~-------~----v-pa~~~~~gvl~C~~Pph----- 358 (848)
..|.++|=.-+++.||.||.++|.++.. ....+.|=+. + + ++.+.....|+|.+||-
T Consensus 4 l~I~r~s~~s~~v~GG~Ev~Llc~kv~K------~dikV~F~e~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I 77 (119)
T 1ikn_C 4 LKIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNI 77 (119)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCT------TSEEEEEEEECTTSCEEEEECCCCGGGEETTTEEEEECCCCSCTTC
T ss_pred CEEEEeeCCccccCCCCEEEEEeccccC------CCCEEEEEEeCCCCCceEEeEEeChhhccccceEEEECCCCCCCCc
Confidence 5699999999999999999999987742 1244444221 1 1 34455578899999998
Q ss_pred -CCceeEEEEEeCCCCCcccccccccCCC
Q 003098 359 -SPGLFLLYMSLDGHKPISQVLNFEYRSP 386 (848)
Q Consensus 359 -~~G~Vpl~v~~~~~~~~Sev~~Fey~~~ 386 (848)
.|=.|.|++.......+|+...|+|...
T Consensus 78 ~~pV~V~i~L~r~sd~~~Sep~~FtY~P~ 106 (119)
T 1ikn_C 78 TKPASVFVQLRRKSDLETSEPKPFLYYPE 106 (119)
T ss_dssp SSCEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCCccCCcccEeecC
Confidence 3555666666643447999999999873
No 141
>1my7_A NF-kappab P65 (RELA) subunit; immunoglobulin, IG, beta-sandwich, beta-sheet, homodimerdna- binding, transcription regulation, activator; 1.49A {Mus musculus} SCOP: b.1.18.1 PDB: 1my5_A 1bft_A
Probab=94.96 E-value=0.044 Score=49.77 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=61.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCC-cccC--CCcceEEEcCCeecceeeeeCCeeeeecCCC------CCceeEEE
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKD-CLHL--SKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH------SPGLFLLY 366 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~-~~~~--~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph------~~G~Vpl~ 366 (848)
..|.++|=.-|++.||.||.++|.++.. .-.+ -...|. +||++. |+++.....|+|.+||- .|=.|.++
T Consensus 4 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~VrF~e~~WE-~~g~f~-~~Dvh~Q~aIvfktPpY~~~~I~~pV~V~i~ 81 (114)
T 1my7_A 4 LKICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 81 (114)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTEE-EECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEE
T ss_pred cEEEEecCCceecCCCcEEEEEecccccCCCEEEEEccCeE-EecccC-hhhcccceeEEEECCCCCCCccCCCEEEEEE
Confidence 5799999999999999999999987642 0000 001232 233332 35677788999999998 34556666
Q ss_pred EEeCCCCCcccccccccCC
Q 003098 367 MSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 367 v~~~~~~~~Sev~~Fey~~ 385 (848)
+...+...+|+...|+|..
T Consensus 82 L~r~sd~~~Sep~~FtY~P 100 (114)
T 1my7_A 82 LRRPSDRELSEPMEFQYLP 100 (114)
T ss_dssp EEETTTTEECCCEEEEEEC
T ss_pred EEeCCCCCcCCCcccEEec
Confidence 6653444789999999987
No 142
>1u36_A DNA-binding, nuclear factor NF-kappa-B P105 subunit; transcription factor, NF-KB, dimerization domain, intertwined folding; 1.89A {Mus musculus} SCOP: b.1.18.1 PDB: 1u3z_A 1u3y_A 3jv4_B 1bfs_A 1u3j_A 1u42_A 1u41_A 1nfi_B
Probab=94.94 E-value=0.052 Score=48.78 Aligned_cols=84 Identities=11% Similarity=0.035 Sum_probs=59.2
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-------ec-----ceeeeeCCeeeeecCCC-----
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-------RV-----PAEFVQAGVYRCFLPPH----- 358 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~-------~v-----pa~~~~~gvl~C~~Pph----- 358 (848)
..|.+.|=.-+++.||.||.++|.++.. ....+.|=+. +. ++.+-....|+|.+||-
T Consensus 4 l~I~r~s~~s~~v~GG~Ev~Llc~kv~K------~dikV~F~E~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I 77 (106)
T 1u36_A 4 LKIVRMDRTAGCVTGGEEIWLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAICFKTPKYKDVNI 77 (106)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCT------TSCEEEEEECC----CEEEECBCCGGGEETTTEEEEECCCCSCTTC
T ss_pred CEEEEeeCCccccCCCCEEEEEeccccC------CCCEEEEEEeCCCCCceEEeeecCHHHcccceEEEEECCCCCCCcc
Confidence 5699999999999999999999987752 1233444321 11 23445568899999998
Q ss_pred -CCceeEEEEEeCCCCCcccccccccCC
Q 003098 359 -SPGLFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 359 -~~G~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
.|=.|.|++.......+|+...|+|..
T Consensus 78 ~~pV~V~~~l~r~sd~~~Sep~~FtY~P 105 (106)
T 1u36_A 78 TKPASVFVQLRRKSDLETSEPKPFLYYP 105 (106)
T ss_dssp SSCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred CCCEEEEEEEEcCCCCCccCCcCcEEcC
Confidence 344555666554344789999999964
No 143
>1oy3_C Transcription factor P65; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: b.1.18.1 PDB: 1k3z_A
Probab=94.06 E-value=0.089 Score=49.03 Aligned_cols=83 Identities=13% Similarity=0.141 Sum_probs=61.5
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEE--------cCCeecceeeeeCCeeeeecCCC------CCc
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCV--------CGEVRVPAEFVQAGVYRCFLPPH------SPG 361 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~--------FG~~~vpa~~~~~gvl~C~~Pph------~~G 361 (848)
..|.++|=.-|++.||.||.++|..+.- ....+. ||++. |+++.....|+|-+||- .|=
T Consensus 4 L~I~r~s~~sg~v~GG~Ev~LLceKv~K------~Di~VrF~e~~WE~~g~f~-~~dVh~Q~AIvfkTPpY~~~~I~~pV 76 (136)
T 1oy3_C 4 LKICRVNRNSGSCLGGDEIFLLCDKVQK------EDIEVYFTGPGWEARGSFS-QADVHRQVAIVFRTPPYADPSLQAPV 76 (136)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCT------TSCEEEEEETTEEEECBCC-GGGBCTTSEEEEECCCCSCTTCCSCE
T ss_pred cEEEEecCCccccCCCcEEEEEcccccc------CCCEEEEEccCeEEecccC-hhheecceEEEEECCCCCCccCCCCe
Confidence 5799999999999999999999987642 123332 23222 35666778899999998 455
Q ss_pred eeEEEEEeCCCCCcccccccccCC
Q 003098 362 LFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 362 ~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
.|-+++...+...+|+...|+|..
T Consensus 77 ~V~iqL~rpsd~~~Sep~~F~Y~P 100 (136)
T 1oy3_C 77 RVSMQLRRPSDRELSEPMEFQYLP 100 (136)
T ss_dssp EEEEEEEETTTTEECCCEEEEEEC
T ss_pred EEEEEEEeCCCCCccCCcceEEec
Confidence 666677664445799999999976
No 144
>1zk9_A Transcription factor RELB; NF-KB, transcription factors, intertwined dimer; 2.18A {Mus musculus} PDB: 1zka_A 3jv6_A 3jv4_A 3jss_A 3juz_A 3jv0_A
Probab=93.92 E-value=0.023 Score=51.30 Aligned_cols=89 Identities=10% Similarity=0.040 Sum_probs=60.4
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCC-cccCC--CcceEEEcCCeecceeeeeCCeeeeecCCC------CCceeEE
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKD-CLHLS--KSNMFCVCGEVRVPAEFVQAGVYRCFLPPH------SPGLFLL 365 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~-~~~~~--~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph------~~G~Vpl 365 (848)
-..|.++|=.-|++.||.||.++|.++.. .-.+. ...|.. ||++ .++++.....|+|.+||- .|=.|.|
T Consensus 12 ~L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~V~F~e~~WE~-~~~f-~~~Dvh~Q~aIvf~tPpY~~~~I~~pV~V~i 89 (110)
T 1zk9_A 12 ELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWEG-RADF-SQADVHRQIAIVFKTPPYEDLEISEPVTVNV 89 (110)
T ss_dssp TSCEEEESCSCCCTTCCCCCCEEESCCCTTSCCCEEEETTEEE-ECCC-CGGGCCCCCCCCCCCCCCSCTTCSSCEEEEE
T ss_pred CCEEEEecCCccccCCCCEEEEEecccccCCcEEEEechheee-cccc-CcccccccceEEEECCCCCCcccCCCeEEEE
Confidence 56799999999999999999999987643 10000 012322 3432 245667778899999997 3344445
Q ss_pred EEEeCCCCCcccccccccCC
Q 003098 366 YMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 366 ~v~~~~~~~~Sev~~Fey~~ 385 (848)
++...+...+|+...|+|..
T Consensus 90 ~L~r~sd~~~Sep~~FtY~P 109 (110)
T 1zk9_A 90 FLQRLTDGVCSEPLPFTYLP 109 (110)
T ss_dssp CCBCTTTCCBCCCEEEEECC
T ss_pred EEEeCCCCCccCCcCcEEcC
Confidence 55443445799999999964
No 145
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=92.36 E-value=0.11 Score=35.80 Aligned_cols=19 Identities=32% Similarity=0.539 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHhhHHHHH
Q 003098 678 NIIAALKIQHAFRNFEVRK 696 (848)
Q Consensus 678 ~~~Aa~~IQ~~~R~~~~r~ 696 (848)
...||+.||++||+|+.++
T Consensus 5 Ee~aA~vIQrA~R~yl~rr 23 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQR 23 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3455555565555555543
No 146
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=92.34 E-value=0.084 Score=35.29 Aligned_cols=17 Identities=29% Similarity=0.620 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHhhHHHH
Q 003098 679 IIAALKIQHAFRNFEVR 695 (848)
Q Consensus 679 ~~Aa~~IQ~~~R~~~~r 695 (848)
..||+.||++||+|+.+
T Consensus 6 e~aA~vIQrA~R~yl~~ 22 (27)
T 2kxw_B 6 EVSAIVIQRAYRRYLLK 22 (27)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555555555543
No 147
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=91.85 E-value=0.62 Score=44.12 Aligned_cols=28 Identities=14% Similarity=0.188 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 003098 720 MRRQAIKIQAAFRGFQVRKQYGKILWSV 747 (848)
Q Consensus 720 ~r~aai~IQa~~Rg~~~Rk~y~~~~~aa 747 (848)
.+.++++||+.+|||++|++++......
T Consensus 44 R~~~~i~iQktvR~~L~rkkhkPRi~g~ 71 (148)
T 3gn4_A 44 RAEACIKMQKTIRMWLCKRRHKPRIDGL 71 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 3446777777777777777776655433
No 148
>2v2t_A RELB, transcription factor RELB; 4-diphosphocytidyl-2C-methyl-D-erythritol, aquifex aeolicus, nucleotide-binding, isoprene biosynthesis; 3.05A {Mus musculus} PDB: 3do7_A
Probab=91.74 E-value=0.34 Score=51.05 Aligned_cols=85 Identities=12% Similarity=0.068 Sum_probs=63.2
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe--ec-----ceeeeeCCeeeeecCCC------CCc
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV--RV-----PAEFVQAGVYRCFLPPH------SPG 361 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~--~v-----pa~~~~~gvl~C~~Pph------~~G 361 (848)
-..|.++|-.-|++.||-||.++|.++.- ....+.|=+. +. ++.+.....|+|.+||- .|=
T Consensus 190 eL~I~r~s~~sgsv~GG~Ev~LLc~kv~K------~dikV~F~e~~WE~~~~f~~~Dvh~Q~aIvf~tPpY~~~~I~~pV 263 (288)
T 2v2t_A 190 ELRICRINKESGPCTGGEELYLLCDKVQK------EDISVVFSTASWEGRADFSQADVHRQIAIVFKTPPYEDLEISEPV 263 (288)
T ss_dssp CCCBCCCSCSCCCSSCCCEEEEEBSSCCT------TSEEEEEECSSCEEECCCCGGGEETTTEEEEECCCCTTCCCSSCC
T ss_pred CCeEEEeeCCccccCCCCEEEEEeccccc------CCCEEEEEecceEEeeEeChhhccceeEEEEECCCCCCCCcCCCe
Confidence 34799999999999999999999987642 2455655441 11 34455667899999998 456
Q ss_pred eeEEEEEeCCCCCcccccccccCC
Q 003098 362 LFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 362 ~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
.|-|++.......+|+...|+|..
T Consensus 264 ~V~iqL~r~sd~~~Sep~~FtY~P 287 (288)
T 2v2t_A 264 TVNVFLQRLTDGVCSEPLPFTYLP 287 (288)
T ss_dssp BCCEEEEETTTCCBCCCBCCBCCC
T ss_pred EEEEEEEeCCCCCcCCCcCcEEcC
Confidence 677777774444799999999964
No 149
>1nfk_A Protein (nuclear factor kappa-B (NF-KB)); NF-KB P50, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 2v2t_B 1ooa_A 1lei_B* 1le9_B 1le5_B* 2i9t_B 1vkx_B* 3gut_B 2o61_B
Probab=91.62 E-value=0.45 Score=50.90 Aligned_cols=86 Identities=10% Similarity=0.034 Sum_probs=61.8
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC-------ee----c-ceeeeeCCeeeeecCCC----
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-------VR----V-PAEFVQAGVYRCFLPPH---- 358 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~-------~~----v-pa~~~~~gvl~C~~Pph---- 358 (848)
-..|.+++-.-|++.||.||.++|..+.- ....+.|=+ -+ + ++.+-....|+|.+||-
T Consensus 209 eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K------~Di~VrF~E~~~~g~~WE~~g~f~~~Dvh~Q~AIvfkTPpY~~~~ 282 (325)
T 1nfk_A 209 NLKIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVN 282 (325)
T ss_dssp CCCEEEESCSCEESSCCCEEEEEESCCCT------TTEEEEEEECCCSSCCEEEECBCCGGGBCTTSEEEEECCCTTSSC
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEEEeCCCCCeeEEeeeeCHHHccceeEEEEECCCCCCCC
Confidence 34899999999999999999999987642 134444322 11 1 33445567899999998
Q ss_pred --CCceeEEEEEeCCCCCcccccccccCCC
Q 003098 359 --SPGLFLLYMSLDGHKPISQVLNFEYRSP 386 (848)
Q Consensus 359 --~~G~Vpl~v~~~~~~~~Sev~~Fey~~~ 386 (848)
.|=.|-|++.......+|+...|+|...
T Consensus 283 I~~pV~V~iqL~r~sd~~~Sep~~FtY~P~ 312 (325)
T 1nfk_A 283 ITKPASVFVQLRRKSDLETSEPKPFLYYPE 312 (325)
T ss_dssp CCSSEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred cCCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 4555666666544457999999999873
No 150
>1a3q_A Protein (nuclear factor kappa-B P52); transcription factor, immune response, DNA-protein complex, transcription/DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 3do7_B 3jv6_B 3jv5_A
Probab=91.30 E-value=0.4 Score=50.49 Aligned_cols=83 Identities=12% Similarity=0.104 Sum_probs=59.8
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC-----eec-----ceeeeeCCeeeeecCCC------C
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-----VRV-----PAEFVQAGVYRCFLPPH------S 359 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~-----~~v-----pa~~~~~gvl~C~~Pph------~ 359 (848)
..|.++|-.-|++.||.||.++|.++.. ....+.|=+ -+. ++.+-....|+|.+||- .
T Consensus 186 L~I~r~s~~sg~v~GG~Ev~Llc~kv~K------~Di~V~F~E~~~~gWE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~~ 259 (285)
T 1a3q_A 186 LKISRMDKTAGSVRGGDEVYLLCDKVQK------DDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIER 259 (285)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCCT------TTEEEEEEECSSSCEEEECBCCGGGEETTTEEEEECCCCSCTTCSS
T ss_pred CeEEEecCCccccCCCCEEEEEeccccC------CCCEEEEEecCCCCCEEeeEeCHHHccceeeEEEECCCCCCCCCCC
Confidence 4799999999999999999999987642 124444422 121 23344477899999998 4
Q ss_pred CceeEEEEEeCCCCCcccccccccC
Q 003098 360 PGLFLLYMSLDGHKPISQVLNFEYR 384 (848)
Q Consensus 360 ~G~Vpl~v~~~~~~~~Sev~~Fey~ 384 (848)
|=.|.|++.......+|+...|+|.
T Consensus 260 pV~V~iqL~r~sd~~~Sep~~FtY~ 284 (285)
T 1a3q_A 260 PVTVFLQLKRKRGGDVSDSKQFTYY 284 (285)
T ss_dssp CEEEEEEEEETTTCCBCCCEEEEEE
T ss_pred CeEEEEEEEeCCCCCccCCCCceeC
Confidence 5566666766444579999999995
No 151
>1ikn_A P65, protein (NF-kappa-B P65 subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 1nfi_A 2ram_A* 1ram_A* 2i9t_A 1lei_A* 1le9_A 1le5_A* 1vkx_A* 3gut_A
Probab=90.71 E-value=0.4 Score=50.47 Aligned_cols=86 Identities=12% Similarity=0.087 Sum_probs=60.4
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC--eec-----ceeeeeCCeeeeecCCC------CCc
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE--VRV-----PAEFVQAGVYRCFLPPH------SPG 361 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~--~~v-----pa~~~~~gvl~C~~Pph------~~G 361 (848)
-..|.++|-.-|+++||.||.++|.++.. ....+.|=+ -+. ++.+-....|+|.+||- .|=
T Consensus 175 eL~I~r~s~~sg~v~GG~Ev~Llc~kv~K------~di~V~F~e~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~~pV 248 (286)
T 1ikn_A 175 ELKICRVNRNSGSCLGGDEIFLLCDKVQK------EDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPV 248 (286)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESCCCT------TSCEEEEEETTEEEECBCCGGGBCTTSEEEEECCCCSCTTCSSCE
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEeccceEEeeecCHHHhccceeEEEECCCCCCCCcCCCE
Confidence 44899999999999999999999987742 123333322 111 23444567899999998 344
Q ss_pred eeEEEEEeCCCCCcccccccccCCC
Q 003098 362 LFLLYMSLDGHKPISQVLNFEYRSP 386 (848)
Q Consensus 362 ~Vpl~v~~~~~~~~Sev~~Fey~~~ 386 (848)
.|-|++.......+|+...|+|...
T Consensus 249 ~V~i~L~r~sd~~~Sep~~FtY~P~ 273 (286)
T 1ikn_A 249 RVSMQLRRPSDRELSEPMEFQYLPD 273 (286)
T ss_dssp EEEEEEECTTTCCBCCCEEEEEECC
T ss_pred EEEEEEEeCCCCCcCCCcCcEEecC
Confidence 5556665533457999999999873
No 152
>1p7h_L Nuclear factor of activated T-cells, cytoplasmic 2; DNA binding protein, transcription regulation, activator, transcription/DNA complex; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 2o93_L 1a02_N* 1pzu_B 1owr_M 2as5_N 1s9k_C 3qrf_N 1nfa_A 1a66_A*
Probab=90.04 E-value=0.47 Score=49.94 Aligned_cols=88 Identities=14% Similarity=0.120 Sum_probs=61.3
Q ss_pred CcceeEEeccCCccCCCCeEEEEECcCCCCcccC------CC--cceEEEcCCeecceeeeeCCeeeeecCCC------C
Q 003098 294 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHL------SK--SNMFCVCGEVRVPAEFVQAGVYRCFLPPH------S 359 (848)
Q Consensus 294 ~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~------~~--~~~~c~FG~~~vpa~~~~~gvl~C~~Pph------~ 359 (848)
.+..|.+++-.-++..||-||.++|.++...-.+ .. ..| -+||++. .++.....|+|.+||- .
T Consensus 184 ~~l~I~r~s~~sg~v~GG~Ei~Llc~kv~KDikVrF~E~~~dg~~~W-e~~g~f~--~dvh~Q~AIvfkTPpY~~~~I~~ 260 (286)
T 1p7h_L 184 ELPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIW-EMEATVD--KDKSQPNMLFVEIPEYRNKHIRT 260 (286)
T ss_dssp CCCEEEEESCSEEETTCCCEEEEEEESCCSSCEEEEEEECSSSCEEE-EEEECBC--TTTCBTTEEEEECCCCSCTTCSS
T ss_pred CCCeEEEeccccccccCCcEEEEEecccCCCcEEEEEEECCCCCcce-EEeEEeC--ccccccceEEEECCCCccCccCC
Confidence 4689999999999999999999999877421000 00 112 1333332 3456678899999998 4
Q ss_pred CceeEEEEEeCCCCCcccccccccCC
Q 003098 360 PGLFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 360 ~G~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
|=.|.|++...+ ..+|+...|+|..
T Consensus 261 pV~V~~~l~r~d-~~~Sep~~FtY~P 285 (286)
T 1p7h_L 261 PVKVNFYVINGK-RKRSQPQHFTYHP 285 (286)
T ss_dssp CEEEEEEEEETT-TEECCCEEEEEEC
T ss_pred CeEEEEEEeCCC-CCcCCCcCceEec
Confidence 556666666653 3699999999964
No 153
>2o61_A Transcription factor P65/interferon regulatory FA 7/interferon regulatory factor...; protein-DNA complex, transcription-DNA complex; 2.80A {Homo sapiens}
Probab=89.92 E-value=0.34 Score=55.27 Aligned_cols=85 Identities=12% Similarity=0.094 Sum_probs=61.6
Q ss_pred ceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC------eec-ceeeeeCCeeeeecCCC------CCce
Q 003098 296 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE------VRV-PAEFVQAGVYRCFLPPH------SPGL 362 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~------~~v-pa~~~~~gvl~C~~Pph------~~G~ 362 (848)
..|.++|-.-|+++||.||.|+|.++.. ....|.|=+ ..+ ++++.....|+|.+||- .|=.
T Consensus 177 L~I~r~s~~sgsv~GG~Ev~LLc~kv~K------~DikVrF~e~~WE~~a~f~~~Dvh~Q~AIvfkTPpY~~~~I~~pV~ 250 (540)
T 2o61_A 177 LKICRVNRNSGSCLGGDEIFLLCDKVQK------EDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVR 250 (540)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCBT------TBCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSSCCSSCEE
T ss_pred CeEEEecCCccccCCCCeEEEEeccccc------CCcEEEEecccceeccccChhhhcceeeEEEeCCCCCCCCCCCCeE
Confidence 3799999999999999999999987642 134444432 012 35566778899999998 3445
Q ss_pred eEEEEEeCCCCCcccccccccCCC
Q 003098 363 FLLYMSLDGHKPISQVLNFEYRSP 386 (848)
Q Consensus 363 Vpl~v~~~~~~~~Sev~~Fey~~~ 386 (848)
|.|++.......+|+...|+|...
T Consensus 251 V~iqL~r~sd~~~Sep~~FtY~P~ 274 (540)
T 2o61_A 251 VSMQLRRPSDRELSEPMEFQYLPD 274 (540)
T ss_dssp EEEEEECGGGCCBCCCEEEEEECC
T ss_pred EEEEEEeCCCCCcCCCcCcEEecC
Confidence 666665533447899999999884
No 154
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=89.53 E-value=0.49 Score=51.54 Aligned_cols=81 Identities=15% Similarity=0.190 Sum_probs=62.9
Q ss_pred ceeEEeccCCccCCCC-eEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC-----------CCcee
Q 003098 296 FSITDVSPAWAFSNEK-TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-----------SPGLF 363 (848)
Q Consensus 296 ~~I~d~sP~w~~~~gg-~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph-----------~~G~V 363 (848)
+.|.+..+--| .|. .-|-|.|.+|.+ ++.+=||++++-+.+-.+-.|.|..|+- .|-.|
T Consensus 328 vP~v~~l~l~g--~g~~amlEl~G~nF~~-------~L~VWFG~v~aeT~yR~~e~l~c~vP~~~~~~~~w~~~~~~~~V 398 (422)
T 3iag_C 328 VPVVESLQLNG--GGDVAMLELTGQNFTP-------NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQV 398 (422)
T ss_dssp CCEEEEEEECC--CSSSCEEEEEEESCCT-------TEEEEETTEECCEEEEETTEEEEECCCGGGTSTTCSSCCSCEEE
T ss_pred CCeEEEEEecC--CCceeEEEEEccCCCC-------CceEEECCCCceeEEeccceEEEeCCCHHHhccCccccCCceEE
Confidence 34555555322 222 568899999965 7999999999999999999999999983 57889
Q ss_pred EEEEEeCCCCCcccccccccCC
Q 003098 364 LLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 364 pl~v~~~~~~~~Sev~~Fey~~ 385 (848)
|+.+.-.++..-+--..|+|..
T Consensus 399 pi~LVR~DGviy~t~~tfty~p 420 (422)
T 3iag_C 399 PVTLVRNDGVIYSTSLTFTYTP 420 (422)
T ss_dssp EEEEEETTSEEEEEEEEEEECC
T ss_pred EEEEEecCCEEeeCCccEEecC
Confidence 9999998887656667788865
No 155
>1svc_P Protein (nuclear factor kappa-B (NF-KB)); DNA-binding, transcription regulation, activator, nuclear protein, phosphorylation, repeat, DNA; HET: DNA; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=89.49 E-value=0.56 Score=50.85 Aligned_cols=85 Identities=11% Similarity=0.039 Sum_probs=61.1
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCe-------e----c-ceeeeeCCeeeeecCCC----
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-------R----V-PAEFVQAGVYRCFLPPH---- 358 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~-------~----v-pa~~~~~gvl~C~~Pph---- 358 (848)
-..|.+++-..|++.||.||.++|..+.- ....+.|=+. + + ++.+-....|+|.+||-
T Consensus 249 eL~I~R~s~~sgsv~GG~Ev~LLc~Kv~K------~DikVrF~E~~~~g~~WE~~g~f~~~DVH~Q~AIvfkTPpY~~~~ 322 (365)
T 1svc_P 249 NLKIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDIN 322 (365)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESSCCG------GGCEEEEEEEETTTEEEEEECBCCGGGEETTTEEEEECCCCSCSC
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEEEeCCCCCeeEEeeeeChHHhcceeeEEEECCCCCCCC
Confidence 34899999999999999999999987642 1344444331 1 1 34455567899999998
Q ss_pred --CCceeEEEEEeCCCCCcccccccccCC
Q 003098 359 --SPGLFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 359 --~~G~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
.|=.|-|++.......+|+...|+|..
T Consensus 323 I~~pV~V~iqL~R~sd~~~Sep~~FtY~P 351 (365)
T 1svc_P 323 ITKPASVFVQLRRKSDLETSEPKPFLYYP 351 (365)
T ss_dssp CSSCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred cCCCeEEEEEEEcCCCCCccCCccceeec
Confidence 355566666554444799999999987
No 156
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=89.45 E-value=0.26 Score=34.02 Aligned_cols=20 Identities=40% Similarity=0.453 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHHhhhHHHHH
Q 003098 644 AAEAAARIQAAFREHSLKVQ 663 (848)
Q Consensus 644 ~~~Aai~IQ~~~R~~~~Rkr 663 (848)
-.-+|+.||.+||+|+.|+.
T Consensus 5 Ee~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 35689999999999999854
No 157
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=88.68 E-value=0.3 Score=32.64 Aligned_cols=20 Identities=35% Similarity=0.316 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHhhhHHHH
Q 003098 643 TAAEAAARIQAAFREHSLKV 662 (848)
Q Consensus 643 ~~~~Aai~IQ~~~R~~~~Rk 662 (848)
....||+.||.+||+|+.++
T Consensus 4 ~Ee~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 4 QEEVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34579999999999999873
No 158
>1imh_C NF-AT5, tonebp, nuclear factor of activated T cells 5; beta barrel, protein-DNA complex, double helix, DNA encirclement, transcription/DNA complex; 2.86A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=88.09 E-value=0.8 Score=48.09 Aligned_cols=88 Identities=14% Similarity=0.116 Sum_probs=60.3
Q ss_pred CcceeEEeccCCccCCCCeEEEEECcCCCCcccC-------CCcceEEEcCCeecceeeeeCCeeeeecCCC------CC
Q 003098 294 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHL-------SKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH------SP 360 (848)
Q Consensus 294 ~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~-------~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph------~~ 360 (848)
....|.++|-.-|++.||-||.++|.++...-.+ ....|.- ||++. + +.+....|+|.+||- .|
T Consensus 180 ~~l~I~r~s~~sg~v~GG~Ev~Llc~kv~KdikVrF~E~~~d~~~WE~-~~~f~-~-~dvhQ~aIvf~tPpY~~~~I~~p 256 (281)
T 1imh_C 180 GVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKS-EAEID-M-ELFHQNHLIVKVPPYHDQHITLP 256 (281)
T ss_dssp CCCEEEEESCCEEETTCCCEEEEEEECCCTTCEEEEESSSCTTCSCEE-EECBC-G-GGCCSSEEEEECCCCSCTTCSSC
T ss_pred CCCeEEEEecCccccCCCcEEEEEeeccCCCcEEEEEEeCCCCCceEE-eEEeC-h-hhcccceEEEECCCCccCccCCC
Confidence 5788999999999999999999999876431000 0112322 33332 2 233478899999998 45
Q ss_pred ceeEEEEEeCCCCCcccccccccCC
Q 003098 361 GLFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 361 G~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
=.|.|++.. +....|+...|+|..
T Consensus 257 V~V~iqL~r-sd~~~S~p~~FtY~P 280 (281)
T 1imh_C 257 VSVGIYVVT-NAGRSHDVQPFTYTP 280 (281)
T ss_dssp EEEEEEEEE-TTEECCSCEEEEEEC
T ss_pred eEEEEEEEe-CCCCccCCcCceecC
Confidence 566677665 334689999999964
No 159
>1gji_A C-REL protein, C-REL proto-oncogene protein; NF-KB/DNA complex, transcription factor, C-REL homodimer, transcription/DNA complex; 2.85A {Gallus gallus} SCOP: b.1.18.1 b.2.5.3
Probab=87.37 E-value=0.63 Score=48.73 Aligned_cols=86 Identities=12% Similarity=0.092 Sum_probs=60.8
Q ss_pred CcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC--ee----c-ceeeeeCCeeeeecCCC-----CCc
Q 003098 294 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE--VR----V-PAEFVQAGVYRCFLPPH-----SPG 361 (848)
Q Consensus 294 ~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~--~~----v-pa~~~~~gvl~C~~Pph-----~~G 361 (848)
.-..|.++|=.-|++.||.||.++|..+.- ....+.|=+ -+ + ++.+.....|+|.+||- .|=
T Consensus 177 ~eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K------~di~VrF~e~~We~~~~f~~~Dvh~Q~AIvf~TPpY~~~I~~pV 250 (275)
T 1gji_A 177 AELRICRVNKNCGSVKGGDEIFILCDKVQK------DDIEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPPFLRDITEPI 250 (275)
T ss_dssp SCCCEEEESCSEEETTCCCEEEEEESCCCG------GGCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSCCSSCE
T ss_pred CCCEEEEeeCCccccCCCCEEEEEeccccc------CCCEEEEEccceeeccccChhhhcceeeEEEeCCCCCcCCCCCE
Confidence 345799999999999999999999987642 123443322 11 1 34556678899999998 344
Q ss_pred eeEEEEEeCCCCCcccccccccCC
Q 003098 362 LFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 362 ~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
.|.+++.......+|+...|+|..
T Consensus 251 ~V~iqL~r~sd~~~Sep~~FtY~P 274 (275)
T 1gji_A 251 TVKMQLRRPSDQEVSEPMDFRYLP 274 (275)
T ss_dssp EEEEEEEEGGGTEECCCEEEEEEC
T ss_pred EEEEEEEcCCCCCccCCcCcEEcC
Confidence 555666653334699999999964
No 160
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=85.32 E-value=1.3 Score=55.17 Aligned_cols=43 Identities=9% Similarity=0.189 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 003098 699 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGK 742 (848)
Q Consensus 699 ~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~ 742 (848)
.+|+.|| .+|||..|++|++++.+++.||..+|+++.|+.+..
T Consensus 776 ~~~~~iq-~~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~~~ 818 (1052)
T 4anj_A 776 HLAELVK-RVNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEAVS 818 (1052)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 3666666 579999999999999999999999998877665543
No 161
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=85.06 E-value=2.7 Score=39.74 Aligned_cols=66 Identities=12% Similarity=0.271 Sum_probs=44.0
Q ss_pred HHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 653 AAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAF 731 (848)
Q Consensus 653 ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~~r~~~~aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~ 731 (848)
+-+..|+.+.|..+.+++. .++++++.-.. =+..+++.||+.+|||++|+.++..-....++.+..
T Consensus 13 ~kV~~WLi~sRWrK~q~~~--------lsvIKLknKI~-----yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~ 78 (148)
T 3gn4_A 13 KRVNHWLICSRWKKVQWCS--------LSVIKLKNKIK-----YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK 78 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3456788888887777333 44555554210 012489999999999999999987666655555443
No 162
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=84.43 E-value=1.8 Score=47.67 Aligned_cols=78 Identities=17% Similarity=0.078 Sum_probs=55.3
Q ss_pred CcceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCC-eecc-eeee--eCCeeeeecCCCC---CceeEEE
Q 003098 294 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVP-AEFV--QAGVYRCFLPPHS---PGLFLLY 366 (848)
Q Consensus 294 ~~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~-~~vp-a~~~--~~gvl~C~~Pph~---~G~Vpl~ 366 (848)
..+.|+.+||+.+ ..|..|+|.|.+|.. .-.+.||+ +++. ...+ ++..|+-.+|.-. +|.+ .
T Consensus 112 PaPtITSISpe~~--~aGd~VTItGsNF~~-------iskV~FgG~veaT~~~svs~S~T~ItVtVPaGA~~~sG~I--t 180 (439)
T 3orj_A 112 AAPSITKISNCMP--NVGEPIIVYGSGLTE-------IAKVVFPGNVVVTEGIISDLDGEYFMVDMPAGVSEEGGSI--F 180 (439)
T ss_dssp SCCEEEEESCSSC--CTTCEEEEEEECCTT-------CCEEEETTTEEECSSCEECTTSSEEEEECCTTCCTTCBCC--E
T ss_pred CCCEEEEeCCCCC--CCCCEEEEEccCCCc-------eeEEEECCCeeEEEEEEecCCCCEEEEEecCCCcCCCceE--E
Confidence 3578999999875 689999999999966 37899986 6554 2233 6678999999874 4655 4
Q ss_pred EEeCCCCCcccccccccCC
Q 003098 367 MSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 367 v~~~~~~~~Sev~~Fey~~ 385 (848)
|...++.. ...|-|++
T Consensus 181 VvT~~GtA---~S~~~f~d 196 (439)
T 3orj_A 181 VEGSNGGA---YSPAYFNY 196 (439)
T ss_dssp EEETTEEE---ECCSCBTC
T ss_pred EEeCCCcE---eeeEEEcc
Confidence 44555433 23455555
No 163
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=76.12 E-value=2.2 Score=51.53 Aligned_cols=30 Identities=30% Similarity=0.513 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 003098 718 LNMRRQAIKIQAAFRGFQVRKQYGKILWSV 747 (848)
Q Consensus 718 ~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa 747 (848)
..+..+++.||++||||++|++|++++.++
T Consensus 765 ~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 765 DKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344557888999999999999998877653
No 164
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=74.60 E-value=2.1 Score=51.75 Aligned_cols=28 Identities=43% Similarity=0.738 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003098 697 KMAAAARIQHRFRSWKVRKEFLNMRRQA 724 (848)
Q Consensus 697 ~~~aA~~IQa~~Rg~~~Rk~~~~~r~aa 724 (848)
...+|+.||+.||||++|++|+++|+++
T Consensus 767 l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 767 LRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4458999999999999999999999865
No 165
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=74.45 E-value=3.8 Score=50.93 Aligned_cols=37 Identities=8% Similarity=0.092 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhHH
Q 003098 645 AEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFE 693 (848)
Q Consensus 645 ~~Aai~IQ~~~R~~~~Rkr~~~~r~~~~~~~~~~~~Aa~~IQ~~~R~~~ 693 (848)
..+|+.|| .+|||++|++|++++ .+|+.||..+|+++
T Consensus 775 ~~~~~~iq-~~r~~l~r~~~~k~~-----------~~a~~i~~~~r~~~ 811 (1052)
T 4anj_A 775 DHLAELVK-RVNHWLICSRWKKVQ-----------WCSLSVIKLKNKIK 811 (1052)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHH
Confidence 45566566 579999999998777 66777776655543
No 166
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.15 E-value=2.6 Score=38.94 Aligned_cols=30 Identities=23% Similarity=0.504 Sum_probs=24.4
Q ss_pred EEeeeccCCCCCcceeeeeeccCCCCceEEEE
Q 003098 37 HVYYAHGEDSPTFVRRCYWLLDKTLENIVLVH 68 (848)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (848)
-+|-+|--..-+-.+|-||.||. ..|.|.+
T Consensus 11 eGWmVH~t~~d~~rKRHYWrLD~--K~Itlf~ 40 (129)
T 2d9z_A 11 EGWMVHYTSRDNLRKRHYWRLDS--KCLTLFQ 40 (129)
T ss_dssp EEEEEEEESSCCCCEEEEEEEES--SCEEEES
T ss_pred cceEEEEccCCccccceeeEecC--CeEEEEe
Confidence 37888877666779999999999 7888864
No 167
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=62.97 E-value=7.1 Score=37.84 Aligned_cols=15 Identities=40% Similarity=0.629 Sum_probs=6.1
Q ss_pred HHHHHHHHHHhhHHH
Q 003098 680 IAALKIQHAFRNFEV 694 (848)
Q Consensus 680 ~Aa~~IQ~~~R~~~~ 694 (848)
.||+.||++||.|+.
T Consensus 131 ~aA~~IQra~R~~~~ 145 (168)
T 4dck_A 131 VSAMVIQRAFRRHLL 145 (168)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444333
No 168
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=55.51 E-value=17 Score=40.46 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=61.5
Q ss_pred cceeEEeccCCccCCCCeEEEEECcCCCCcccCCCcceEEEcCCeecceeeeeCCeeeeecCCC----C-----------
Q 003098 295 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH----S----------- 359 (848)
Q Consensus 295 ~~~I~d~sP~w~~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~vpa~~~~~gvl~C~~Pph----~----------- 359 (848)
.+.|.+..|.-|- ..-.-+-|.|.+|.+ ++.+=||++++-+.+=.+-.|.|.+|+- .
T Consensus 375 PvP~V~~~~~~g~-g~~~mlel~G~nF~~-------~l~VWfG~~~aeT~~r~~e~l~c~vP~~s~~~~~~~~w~~~~~~ 446 (477)
T 3brd_A 375 PCPVVGSLEVDGH-GEASRVELHGRDFKP-------NLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRT 446 (477)
T ss_dssp SCCEEEEEEEECS-GGGCEEEEEEECCCT-------TEEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHBCTT
T ss_pred CCCeeeEEeecCC-CceeEEEEEcccCCC-------CCeEEECCccceeeEEccceeeccCCCHHHhCcccccccccccc
Confidence 4557777776431 113667889998855 7999999998888877777899999976 1
Q ss_pred --CceeEEEEEeCCCCCcccccccccCC
Q 003098 360 --PGLFLLYMSLDGHKPISQVLNFEYRS 385 (848)
Q Consensus 360 --~G~Vpl~v~~~~~~~~Sev~~Fey~~ 385 (848)
+=.|||.+...++..-.--..|+|..
T Consensus 447 ~~~~~vPl~LVr~dGviy~t~~tf~y~p 474 (477)
T 3brd_A 447 TGDVEVPISLVRDDGVVYSSGLTFSYKS 474 (477)
T ss_dssp TCCBEEEEEEEETTSEEEEEEEEEETTC
T ss_pred CCceEeeEEEEecCCEEEecCceEEecc
Confidence 33499988888886656667788864
No 169
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=52.30 E-value=24 Score=41.76 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=47.5
Q ss_pred CcceeEEeccCCccCC-CCeEEEEECcCCCCcccCCCcceEEEcCCe-ecceeeeeCCeeeeecCCC------CCc----
Q 003098 294 HLFSITDVSPAWAFSN-EKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGVYRCFLPPH------SPG---- 361 (848)
Q Consensus 294 ~~~~I~d~sP~w~~~~-gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~-~vpa~~~~~gvl~C~~Pph------~~G---- 361 (848)
|=..|+ +.|.--+.+ ..++|++...++.. |. .+|.|.||+. +.++. +..+.+.|..|+- .+|
T Consensus 527 qC~~i~-~~P~~~s~~~~~~~v~l~v~~lP~---l~-~~~~C~fg~~~~~~a~-~~~~~v~C~sP~~~~~p~~p~g~d~~ 600 (681)
T 3oky_A 527 QCMSLE-VHPNSISVSDHSRLLSLVVNDAPN---LS-EGIACAFGNLTEVEGQ-VSGSQVICISPGPKDVPVIPLDQDWF 600 (681)
T ss_dssp GCCEEE-EESSEEETTSCSCEEEEEEETCCC---CT-TCEEEEETTTEEEECE-EETTEEEEECCCTTTSCCCC--CCEE
T ss_pred ccceee-ecCccccccccccEEEEeccCCCC---CC-CCCEEEcCCcccccce-ecCCeeEeCCCCHHhCCCCCCCceEE
Confidence 444664 899877764 46788887777743 33 3599999995 56665 4677789987764 344
Q ss_pred eeEEEEEeC
Q 003098 362 LFLLYMSLD 370 (848)
Q Consensus 362 ~Vpl~v~~~ 370 (848)
.|+|.+...
T Consensus 601 ~v~l~l~~~ 609 (681)
T 3oky_A 601 GLELQLRSK 609 (681)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEec
Confidence 256777654
No 170
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=51.18 E-value=14 Score=35.65 Aligned_cols=23 Identities=22% Similarity=0.330 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 003098 697 KMAAAARIQHRFRSWKVRKEFLN 719 (848)
Q Consensus 697 ~~~aA~~IQa~~Rg~~~Rk~~~~ 719 (848)
...||+.||++||.|+.|+.+..
T Consensus 129 e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 129 EEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 34577888888888777665543
No 171
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=42.81 E-value=37 Score=37.35 Aligned_cols=69 Identities=14% Similarity=0.113 Sum_probs=50.5
Q ss_pred cCCCCeEEEEECcCCCCcccCCCcceEEEcCCeec--ceeeeeCCeeeeecCCCC-Cc------eeEEEEEeCCCCCccc
Q 003098 307 FSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRV--PAEFVQAGVYRCFLPPHS-PG------LFLLYMSLDGHKPISQ 377 (848)
Q Consensus 307 ~~~gg~kVlV~G~~~~~~~~~~~~~~~c~FG~~~v--pa~~~~~gvl~C~~Pph~-~G------~Vpl~v~~~~~~~~Se 377 (848)
....|..|+|.|.+|.. ...+.||++++ ...++.+..|.-.+|... +| ...++|...++. -
T Consensus 34 ~a~pGd~ItItGsNL~~-------vtkV~FNdvea~fnstyiTdtsI~VtIPs~aP~G~vd~~VtnkI~VvTdgGt---~ 103 (439)
T 3orj_A 34 FARLGQLIRIEGEGFNG-------LKKVYINGYNCYFNPVFVSNKSFLVSVNSKVPTTEADENVRNTIRLVKDGGE---Y 103 (439)
T ss_dssp EEETTCEEEEEEECCTT-------CCEEEETTEECCBCGGGCCSSEEEEECCTTCCSTTSCTTTTTEEEEEETTEE---E
T ss_pred cccCCCEEEEEeeCCCC-------eeEEEECCEEeeeccccccCCEEEEEcCCCCCCccccccccceEEEEECCCE---E
Confidence 45679999999999966 46899999987 456789999999999874 34 346777775542 2
Q ss_pred ccccccCC
Q 003098 378 VLNFEYRS 385 (848)
Q Consensus 378 v~~Fey~~ 385 (848)
...|.+..
T Consensus 104 ty~FtVla 111 (439)
T 3orj_A 104 VYDFQIRA 111 (439)
T ss_dssp EEECEEEC
T ss_pred eeeeEEec
Confidence 23455544
No 172
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=36.12 E-value=28 Score=31.96 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=25.5
Q ss_pred EEEeeeccCCCCCcceeeeeeccCCCCceEEEE
Q 003098 36 IHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVH 68 (848)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (848)
--+|-+|--..-+-.||-||.||. ..|.|.+
T Consensus 10 keGW~VH~t~~d~~rKRHYWrLD~--K~Itlf~ 40 (125)
T 2coa_A 10 REGWVVHYSNKDTLRKRHYWRLDC--KCITLFQ 40 (125)
T ss_dssp EEEEEEECCSSSCCCEEEEEEECS--SEEEEES
T ss_pred ecceEEEEccCCccccceeeEecC--CeEEEEe
Confidence 347889988887888999999999 7787754
No 173
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=31.70 E-value=59 Score=40.30 Aligned_cols=45 Identities=11% Similarity=0.027 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 003098 700 AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKIL 744 (848)
Q Consensus 700 aA~~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~ 744 (848)
-|..++.|+|+...+..++..+.+++.||+.||++..++.+.+..
T Consensus 766 ~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp 810 (995)
T 2ycu_A 766 RANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPP 810 (995)
T ss_dssp HHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccc
Confidence 344567777777777777777788888888888887777665543
No 174
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=30.97 E-value=13 Score=31.18 Aligned_cols=9 Identities=44% Similarity=1.032 Sum_probs=7.7
Q ss_pred ccCcccccc
Q 003098 7 KDGHNWKKK 15 (848)
Q Consensus 7 ~~~~~~~~~ 15 (848)
.|||.|||=
T Consensus 18 dDGy~WRKY 26 (78)
T 1wj2_A 18 DDGYRWRKY 26 (78)
T ss_dssp CSSSCBCCC
T ss_pred CCCchhhhC
Confidence 699999975
No 175
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=29.38 E-value=13 Score=31.04 Aligned_cols=8 Identities=50% Similarity=1.261 Sum_probs=7.2
Q ss_pred ccCccccc
Q 003098 7 KDGHNWKK 14 (848)
Q Consensus 7 ~~~~~~~~ 14 (848)
.|||.|||
T Consensus 15 ~DGy~WRK 22 (76)
T 2ayd_A 15 NDGYRWRK 22 (76)
T ss_dssp CCSSCEEE
T ss_pred CCCchhhh
Confidence 59999998
No 176
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=21.47 E-value=3.6e+02 Score=33.32 Aligned_cols=20 Identities=15% Similarity=0.076 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003098 700 AAARIQHRFRSWKVRKEFLN 719 (848)
Q Consensus 700 aA~~IQa~~Rg~~~Rk~~~~ 719 (848)
+++.||+.+|+++.++...+
T Consensus 789 sl~~IQ~~ir~f~~fr~~ek 808 (995)
T 2ycu_A 789 SIESVQSFMNAHKEYKKTEK 808 (995)
T ss_dssp HHHHHHHHHHHHTTHHHHTH
T ss_pred hHHHHHHHHHHHHHHHHHhc
Confidence 45555555555554444433
Done!