Your job contains 1 sequence.
>003100
MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE
QEKQLYQARVRSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDD
GPVKSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLS
ESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRD
KAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRFKRNESSSSDDDSDIDS
EDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKL
NGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAV
VKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK
NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVL
DEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLG
SVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM
KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ
YIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI
DNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKD
IPGIRLRK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003100
(848 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2038431 - symbol:AT1G63250 species:3702 "Arabi... 1822 1.6e-228 2
TAIR|locus:2054688 - symbol:AT2G07750 species:3702 "Arabi... 1826 2.3e-188 1
TAIR|locus:2159517 - symbol:PDE340 "PIGMENT DEFECTIVE 340... 1357 1.2e-138 1
TAIR|locus:2159527 - symbol:STRS2 "STRESS RESPONSE SUPPRE... 1277 3.5e-130 1
UNIPROTKB|Q2KEF1 - symbol:MGCH7_ch7g1085 "Putative unchar... 647 2.0e-63 1
ASPGD|ASPL0000028276 - symbol:AN5623 species:162425 "Emer... 560 3.4e-54 1
UNIPROTKB|E2RC35 - symbol:DDX10 "Uncharacterized protein"... 555 4.0e-53 1
MGI|MGI:1924841 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) bo... 551 1.2e-52 1
RGD|1308990 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box po... 550 1.5e-52 1
UNIPROTKB|Q08DT0 - symbol:DDX10 "Uncharacterized protein"... 548 1.0e-51 1
UNIPROTKB|E9PIF2 - symbol:DDX10 "Probable ATP-dependent R... 545 3.0e-51 1
UNIPROTKB|Q13206 - symbol:DDX10 "Probable ATP-dependent R... 545 4.3e-51 1
POMBASE|SPAC1093.05 - symbol:SPAC1093.05 "ATP-dependent R... 530 6.8e-50 1
GENEDB_PFALCIPARUM|PF13_0037 - symbol:PF13_0037 "DEAD box... 520 7.3e-50 1
UNIPROTKB|Q8IEP2 - symbol:PF13_0037 "DEAD box helicase, p... 520 7.3e-50 1
DICTYBASE|DDB_G0284017 - symbol:ddx10 "DEAD/DEAH box heli... 528 2.1e-49 2
UNIPROTKB|F1NEQ3 - symbol:DDX18 "Uncharacterized protein"... 497 5.9e-49 2
DICTYBASE|DDB_G0282741 - symbol:ddx18 "DEAD/DEAH box heli... 512 6.4e-49 1
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 512 6.4e-49 1
UNIPROTKB|F1N533 - symbol:DDX18 "Uncharacterized protein"... 488 2.1e-48 2
UNIPROTKB|F1MSX0 - symbol:F1MSX0 "Uncharacterized protein... 488 4.8e-48 2
UNIPROTKB|F1P0I3 - symbol:DDX10 "Probable ATP-dependent R... 520 1.2e-47 1
UNIPROTKB|Q5ZJF6 - symbol:DDX10 "Probable ATP-dependent R... 520 1.2e-47 1
POMBASE|SPAC1F7.02c - symbol:has1 "ATP-dependent RNA heli... 477 6.8e-47 2
ASPGD|ASPL0000061778 - symbol:AN0589 species:162425 "Emer... 512 7.5e-47 1
MGI|MGI:1914192 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) bo... 493 9.9e-47 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 491 1.7e-46 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 491 1.9e-46 2
SGD|S000003570 - symbol:HCA4 "DEAD box RNA helicase" spec... 507 2.0e-46 1
UNIPROTKB|E2RFA3 - symbol:DDX18 "Uncharacterized protein"... 485 7.1e-46 2
FB|FBgn0025140 - symbol:pit "pitchoune" species:7227 "Dro... 493 1.1e-45 1
UNIPROTKB|Q9NVP1 - symbol:DDX18 "ATP-dependent RNA helica... 486 1.1e-45 2
TAIR|locus:2086909 - symbol:AT3G18600 species:3702 "Arabi... 479 3.7e-45 1
UNIPROTKB|I3L840 - symbol:DDX18 "Uncharacterized protein"... 485 7.1e-45 1
UNIPROTKB|F1RY13 - symbol:DDX18 "Uncharacterized protein"... 485 1.0e-44 1
CGD|CAL0003050 - symbol:HAS1 species:5476 "Candida albica... 475 1.1e-44 1
UNIPROTKB|Q5AK59 - symbol:HAS1 "ATP-dependent RNA helicas... 475 1.1e-44 1
ZFIN|ZDB-GENE-071022-2 - symbol:ddx10 "DEAD (Asp-Glu-Ala-... 495 1.2e-44 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 471 2.9e-44 1
UNIPROTKB|I3L7B7 - symbol:DDX18 "Uncharacterized protein"... 485 3.0e-44 1
SGD|S000004903 - symbol:HAS1 "ATP-dependent RNA helicase"... 470 3.8e-44 1
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 468 6.3e-44 1
UNIPROTKB|Q29S22 - symbol:DDX47 "Probable ATP-dependent R... 467 8.1e-44 1
UNIPROTKB|I3L976 - symbol:DDX47 "Uncharacterized protein"... 467 8.1e-44 1
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 467 8.1e-44 1
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 467 8.1e-44 1
UNIPROTKB|E2RN03 - symbol:DDX47 "Uncharacterized protein"... 466 1.1e-43 1
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 466 1.1e-43 1
CGD|CAL0004182 - symbol:HCA4 species:5476 "Candida albica... 483 1.5e-43 1
UNIPROTKB|A4RGU2 - symbol:DBP4 "ATP-dependent RNA helicas... 482 2.5e-43 1
SGD|S000002602 - symbol:MSS116 "DEAD-box protein involved... 465 6.5e-43 2
WB|WBGene00015232 - symbol:B0511.6 species:6239 "Caenorha... 456 1.4e-42 1
UNIPROTKB|Q0C4B9 - symbol:HNE_0695 "Putative ATP-dependen... 455 1.8e-42 1
TAIR|locus:2152099 - symbol:AT5G65900 species:3702 "Arabi... 462 1.8e-42 1
ZFIN|ZDB-GENE-050522-359 - symbol:zgc:112350 "zgc:112350"... 437 5.3e-42 2
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 448 1.0e-41 1
TAIR|locus:2087852 - symbol:PMH2 "putative mitochondrial ... 452 1.1e-41 1
UNIPROTKB|Q8ECL2 - symbol:SO_3125 "ATP-dependent RNA heli... 446 1.7e-41 1
TIGR_CMR|SO_3125 - symbol:SO_3125 "ATP-dependent RNA heli... 446 1.7e-41 1
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli... 445 2.2e-41 1
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli... 445 2.2e-41 1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he... 444 2.9e-41 1
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 440 7.9e-41 1
UNIPROTKB|Q8EDC4 - symbol:SO_2838 "ATP-dependent RNA heli... 440 7.9e-41 1
UNIPROTKB|Q9KNA4 - symbol:VC_A0061 "ATP-dependent RNA hel... 440 7.9e-41 1
TIGR_CMR|SO_2838 - symbol:SO_2838 "ATP-dependent RNA heli... 440 7.9e-41 1
TIGR_CMR|VC_A0061 - symbol:VC_A0061 "ATP-dependent RNA he... 440 7.9e-41 1
TIGR_CMR|CPS_2658 - symbol:CPS_2658 "ATP-dependent RNA he... 439 1.0e-40 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 437 1.7e-40 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 437 1.7e-40 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 437 1.7e-40 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 437 1.7e-40 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 437 1.7e-40 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 437 1.7e-40 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 437 1.7e-40 1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he... 437 1.7e-40 1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli... 437 1.7e-40 1
FB|FBgn0030855 - symbol:CG5800 species:7227 "Drosophila m... 456 2.8e-40 1
UNIPROTKB|P21693 - symbol:dbpA species:83333 "Escherichia... 434 3.6e-40 1
UNIPROTKB|Q9KS53 - symbol:VC1407 "ATP-dependent RNA helic... 434 3.6e-40 1
TIGR_CMR|VC_1407 - symbol:VC_1407 "ATP-dependent RNA heli... 434 3.6e-40 1
POMBASE|SPBC691.04 - symbol:SPBC691.04 "mitochondrial ATP... 434 3.6e-40 1
UNIPROTKB|Q9KMW4 - symbol:VC_A0204 "ATP-dependent RNA hel... 431 7.6e-40 1
TIGR_CMR|VC_A0204 - symbol:VC_A0204 "ATP-dependent RNA he... 431 7.6e-40 1
POMBASE|SPBC543.06c - symbol:dbp8 "ATP-dependent RNA heli... 431 7.6e-40 1
ASPGD|ASPL0000054998 - symbol:AN0894 species:162425 "Emer... 445 8.2e-40 1
WB|WBGene00021277 - symbol:Y23H5B.6 species:6239 "Caenorh... 447 1.7e-39 1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 427 2.1e-39 1
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he... 427 2.1e-39 1
ASPGD|ASPL0000069536 - symbol:AN7424 species:162425 "Emer... 426 2.7e-39 1
TAIR|locus:2087832 - symbol:PMH1 "putative mitochondrial ... 437 2.9e-39 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 438 3.3e-39 1
ZFIN|ZDB-GENE-031030-3 - symbol:ddx49 "DEAD (Asp-Glu-Ala-... 424 4.5e-39 1
TAIR|locus:2160225 - symbol:AT5G54910 species:3702 "Arabi... 443 5.1e-39 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 421 9.5e-39 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 421 9.5e-39 1
TIGR_CMR|CPS_1418 - symbol:CPS_1418 "ATP-dependent RNA he... 421 9.5e-39 1
UNIPROTKB|F1NA53 - symbol:DDX49 "Uncharacterized protein"... 420 1.2e-38 1
UNIPROTKB|F1NYX0 - symbol:DDX49 "Uncharacterized protein"... 420 1.2e-38 1
UNIPROTKB|Q47Z59 - symbol:CPS_3215 "Putative ATP-dependen... 419 1.6e-38 1
WARNING: Descriptions of 760 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2038431 [details] [associations]
symbol:AT1G63250 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 EMBL:AC022355 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 UniGene:At.52694 ProtClustDB:CLSN2713541
IPI:IPI00538833 PIR:C96658 RefSeq:NP_176514.1 UniGene:At.36158
ProteinModelPortal:Q9C8S9 SMR:Q9C8S9 PaxDb:Q9C8S9 PRIDE:Q9C8S9
EnsemblPlants:AT1G63250.1 GeneID:842631 KEGG:ath:AT1G63250
GeneFarm:1027 TAIR:At1g63250 InParanoid:Q9C8S9 OMA:TSSRAHI
PhylomeDB:Q9C8S9 Genevestigator:Q9C8S9 GermOnline:AT1G63250
Uniprot:Q9C8S9
Length = 798
Score = 1822 (646.4 bits), Expect = 1.6e-228, Sum P(2) = 1.6e-228
Identities = 371/635 (58%), Positives = 459/635 (72%)
Query: 218 RRAYFSGTD-KRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNREN-GDSKNMSEFMKK 275
RR + S + KRN D D DT PF+ +E S+++ ++
Sbjct: 171 RRGFSSMSRFKRNESSCDEGDDFDAKKLDT---LSPFSPKFAGTKEKVKSSRSVVGVIRN 227
Query: 276 KCFVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPL 335
K G+R+F++N K+ GW D++K GSSASLG +D+K+TKRV
Sbjct: 228 KGLFGRRKFRKNDSSTEEDSDEEGDEG---KMIGWMDMRKTGSSASLGNHDIKLTKRVN- 283
Query: 336 KSLEDEHDFEE-QVELIRKEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKAL 394
+++ DE + + +R+++S I S KRFDE ISPLT+KAL
Sbjct: 284 RNVTDEELYPPLDINTVREDLSKRKSVDNVMEEKQEPHDSIYSAKRFDESCISPLTLKAL 343
Query: 395 TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST-TQLV 453
+A+G ++MTRVQ+ATLS CL+GKDA+VKAKTGTGKS+AFLLPAIE VLKA +S V
Sbjct: 344 SASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKV 403
Query: 454 PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVA 513
PI+ LILCPTRELASQIAAE ALLK HDGIGV TL+GGTRFK+DQ+RLES+PCQIL+A
Sbjct: 404 APIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIA 463
Query: 514 TPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSA 573
TPGRLLDHIENKSGL+ RLM LK+ ++DEAD LLDLGFR+DVE I+DCLPR+RQSLLFSA
Sbjct: 464 TPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLLFSA 523
Query: 574 TMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHIL 633
T+PKEVRR+SQLVLKR+H+YIDT+GLG VET K++QSC+VAPHE HF ++ HLLKEHI
Sbjct: 524 TIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESHFHLVPHLLKEHIN 583
Query: 634 GTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 693
TPDYK+IVFCSTGMVTSL+Y LLREMK+NVRE+++RKPQL+R R+S+EF+ S RLILVT
Sbjct: 584 NTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESNRLILVT 643
Query: 694 SDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXX 753
SDVSARGM+YPDVT V+QVGIP DREQYIH +LL+APWE YF
Sbjct: 644 SDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEGLLLIAPWERYFLDELK 703
Query: 754 XXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA 813
+ ++ Q+D MAKID ++KEAAYHAWLGYYNS+RE GRDKTTL ELA
Sbjct: 704 DLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWLGYYNSVRETGRDKTTLAELA 763
Query: 814 NKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 848
N+F SIGL++PP LFR+TA+KMGLK I GI +RK
Sbjct: 764 NRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 798
Score = 406 (148.0 bits), Expect = 1.6e-228, Sum P(2) = 1.6e-228
Identities = 104/263 (39%), Positives = 135/263 (51%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXX 60
M S +L +RS +T LW NR+ +R MGGGPRTFPGGLNKWQWKRMH
Sbjct: 1 MYSLILRERSGSITGSLW-NRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLD 59
Query: 61 XXXXXXXARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLW 116
AR+R++IR K++ D +T H PMSP EH+K LADRFMK GAED W
Sbjct: 60 QEKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFW 119
Query: 117 NEDDGPVK-SEQRPRSGAEANQRPRLAGAPIDLRGLIS---D---KRXXXXXXXXXXXXX 169
NE+DGPVK S+Q RSG+++ + +PID+R L+S D K
Sbjct: 120 NENDGPVKKSDQGSRSGSDSIDST--SNSPIDVRRLVSATCDSMGKNRVFGSSRRGFSSM 177
Query: 170 XXKTRNYSVLSESKFSDRSKSASLI-FMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKR 228
RN S E D K +L F P E V SR+V+ +R G +R
Sbjct: 178 SRFKRNESSCDEGDDFDAKKLDTLSPFSPKF-AGTKEKVKSSRSVVGVIRNKGLFG--RR 234
Query: 229 NFCRNDGSSTRDKAGFDTGNKAK 251
F +ND S+ D + G++ K
Sbjct: 235 KFRKNDSSTEEDSD--EEGDEGK 255
>TAIR|locus:2054688 [details] [associations]
symbol:AT2G07750 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AC004483 IPI:IPI00546939 PIR:E84488
RefSeq:NP_178818.1 UniGene:At.52694 ProteinModelPortal:O80792
SMR:O80792 PaxDb:O80792 PRIDE:O80792 EnsemblPlants:AT2G07750.1
GeneID:815422 KEGG:ath:AT2G07750 GeneFarm:994 TAIR:At2g07750
InParanoid:O80792 OMA:FRKTALK PhylomeDB:O80792
ProtClustDB:CLSN2713541 Genevestigator:O80792 GermOnline:AT2G07750
Uniprot:O80792
Length = 845
Score = 1826 (647.8 bits), Expect = 2.3e-188, P = 2.3e-188
Identities = 372/640 (58%), Positives = 461/640 (72%)
Query: 213 VMDFVRRAYFSGTD-KRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNREN-GDSKNMS 270
V+D RR + S + KRN D D DT PF+ +E S ++
Sbjct: 213 VLDSSRRGFSSMSRFKRNESSCDEGDDVDAKKLDT---LSPFSPKFSGTKEKVKSSTSVV 269
Query: 271 EFMKKKCFVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKIT 330
++ K G+R+F++N K+ GW D++K GSSASLG +D+K+T
Sbjct: 270 GVIRNKGLFGRRKFRKNDSSTEEDSDEEGNEG---KMIGWMDLRKTGSSASLGNHDIKLT 326
Query: 331 KRVPLKSLEDEHDFEE-QVELIRKEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPL 389
KRV +++ DE + + +R+++S I S KRFDE ISPL
Sbjct: 327 KRVN-RNVTDEELYPPLDINRVREDLSKKQSVDNVMEEKQEPHDSIYSAKRFDESCISPL 385
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KAL+A+G ++MTRVQ+ATLS CL+GKDA+VKAKTGTGKS+AFLLPAIE VLKA +S
Sbjct: 386 TLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGK 445
Query: 450 -TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPC 508
V PI+VLILCPTRELASQIAAE ALLKNHDGIGV TL+GGTRF++DQ+RLES+PC
Sbjct: 446 GVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPC 505
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQS 568
QIL+ATPGRLLDHIENKSGL+ RLM LK+ ++DEAD LLDLGF++DVE I+DCLPR+RQS
Sbjct: 506 QILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLPRQRQS 565
Query: 569 LLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLL 628
LLFSAT+PKEVRR+SQLVLKR+H+YIDT+GLG VET K+KQSC+VAPHE HF ++ HLL
Sbjct: 566 LLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFHLVPHLL 625
Query: 629 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKR 688
KEHI PDYK+IVFCSTGMVTSL+Y LLREMK+NVRE+++RKPQL+R +S+EF+ S R
Sbjct: 626 KEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNR 685
Query: 689 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYF 748
LILVTSDVSARGM+YPDVT V+QVGIP DREQYIH +LL+APWE YF
Sbjct: 686 LILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKGLLLIAPWERYF 745
Query: 749 XXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT 808
+ ++ Q+D MAKID ++KEAAYHAWLGYYNS+RE GRDKTT
Sbjct: 746 LDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWLGYYNSVRETGRDKTT 805
Query: 809 LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 848
L ELAN+F SIGL++PP LFR+TA+KMGLK I GI +RK
Sbjct: 806 LAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 845
Score = 373 (136.4 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 99/256 (38%), Positives = 129/256 (50%)
Query: 10 SKPLTN--ILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXXXXXXXXX 67
SK +T+ LW NR+F+R MGGGPRTFPGGLNKWQWKRMH
Sbjct: 58 SKRITSERSLW-NRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYE 116
Query: 68 ARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPV 123
AR+R++IR K++ D +T H PMSP EH+K LADRFMK GA+DLWN++DGPV
Sbjct: 117 ARIRTEIRAKMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPV 176
Query: 124 KS-EQRPRSGAEANQRPRLAGAPIDLRGLIS---D---KRXXXXXXXXXXXXXXXKTRNY 176
K +Q RS +++ + PID+R L+S D K RN
Sbjct: 177 KKFDQGSRSCSDS-----IDSTPIDVRRLVSATCDSMGKHRVLDSSRRGFSSMSRFKRNE 231
Query: 177 SVLSESKFSDRSKSASLI-FMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDG 235
S E D K +L F P E V S +V+ +R G +R F +ND
Sbjct: 232 SSCDEGDDVDAKKLDTLSPFSPKFS-GTKEKVKSSTSVVGVIRNKGLFG--RRKFRKNDS 288
Query: 236 SSTRDKAGFDTGNKAK 251
S+ D + GN+ K
Sbjct: 289 STEEDSD--EEGNEGK 302
>TAIR|locus:2159517 [details] [associations]
symbol:PDE340 "PIGMENT DEFECTIVE 340" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010474
IPI:IPI00522710 PIR:T51747 RefSeq:NP_196478.2 UniGene:At.32551
ProteinModelPortal:Q9FNM7 SMR:Q9FNM7 STRING:Q9FNM7 PaxDb:Q9FNM7
PRIDE:Q9FNM7 EnsemblPlants:AT5G08610.1 GeneID:830762
KEGG:ath:AT5G08610 GeneFarm:949 TAIR:At5g08610 InParanoid:Q9FNM7
OMA:GRNDRNV PhylomeDB:Q9FNM7 ProtClustDB:CLSN2918084
Genevestigator:Q9FNM7 GermOnline:AT5G08610 Uniprot:Q9FNM7
Length = 850
Score = 1357 (482.7 bits), Expect = 1.2e-138, P = 1.2e-138
Identities = 306/675 (45%), Positives = 408/675 (60%)
Query: 180 SESKF---SDRSKSASLIFMPNLECN-DGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDG 235
SES F SDR+ + F + N D + RN + + F G RN + G
Sbjct: 194 SESSFRGRSDRNVDSGSSFRGRSDKNVDSGSSFRGRNDRNVDSGSSFRGRSDRNV--DSG 251
Query: 236 SSTRDKA--GFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRFKRNXXXXXX 293
SS R ++ D+G+ + G N N DS S F + + F+R
Sbjct: 252 SSFRGRSDRNVDSGSSFR------GRNDRNVDSG--SSFRGRNDRNVESGFRREPGSENN 303
Query: 294 XXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRK 353
+ E D + + LG D +P + DE D E LI+K
Sbjct: 304 RGLGKQTRGLSLEEEDSSDDDE--NRVGLGNID-----DLPSEDSSDEDD-ENDEPLIKK 355
Query: 354 EISXXXXXXXX-XXXXXXXXXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSA 412
S LS+ RFD+ +SPL++KA+ AG+ MT VQEATL
Sbjct: 356 AASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPI 415
Query: 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIA 472
L+GKD + KAKTGTGK++AFLLPAIEAV+K+ +S PPI VL++CPTRELASQ A
Sbjct: 416 ILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAA 475
Query: 473 AEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRL 532
AEA LLK H IGV ++GGT+ +QRR++++PCQILVATPGRL DHIEN SG + RL
Sbjct: 476 AEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRL 535
Query: 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHT 592
MG+K+LVLDEADHLLD+GFR+D+E I+ +P++RQ+ LFSAT+P+EVR+I + LKR+H
Sbjct: 536 MGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHE 595
Query: 593 YIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSL 652
+I+ V GS ET K+ Q ++A + HF +LH LLKEHI DYKVI+FC+T MVT L
Sbjct: 596 FINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRL 655
Query: 653 LYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 712
+ LL ++ +NVRE++SRKPQ YR R+S+EFR SK +ILVTSDVSARG+DYPDV+ VVQ+
Sbjct: 656 VADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQM 715
Query: 713 GIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQ 772
G+P DREQYIH VLLLAPWEEYF +PE +
Sbjct: 716 GLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKR 775
Query: 773 MDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKT 832
+ +++++ KEAAY AWLGYY S + I RD T LVELAN+F++S+GL PP + +
Sbjct: 776 VQKGLSQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELANEFSRSMGLDSPPAIPKNV 835
Query: 833 ALKMGLKDIPGIRLR 847
KMGLK++PG+R +
Sbjct: 836 LGKMGLKNVPGLRTK 850
>TAIR|locus:2159527 [details] [associations]
symbol:STRS2 "STRESS RESPONSE SUPPRESSOR 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009651 GO:GO:0009409 GO:GO:0009414 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010473 EMBL:AY035114
EMBL:AY142638 IPI:IPI00534387 PIR:T51348 RefSeq:NP_196479.1
UniGene:At.47465 ProteinModelPortal:Q94C75 SMR:Q94C75 STRING:Q94C75
PRIDE:Q94C75 EnsemblPlants:AT5G08620.1 GeneID:830763
KEGG:ath:AT5G08620 GeneFarm:945 TAIR:At5g08620 InParanoid:Q94C75
OMA:RELACQA PhylomeDB:Q94C75 ProtClustDB:CLSN2687472
Genevestigator:Q94C75 GermOnline:AT5G08620 Uniprot:Q94C75
Length = 563
Score = 1277 (454.6 bits), Expect = 3.5e-130, P = 3.5e-130
Identities = 267/535 (49%), Positives = 354/535 (66%)
Query: 313 VKKMGSSAS-LGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISXXXXXXXXXXXXXXX 371
VKK+ S GK +K + + E + D +E LI+K S
Sbjct: 20 VKKLTSDEDGSGKL-VKDNNKSLKRGREGKSDVDEP--LIKKPASTTPLVTQIAKTSDSY 76
Query: 372 XXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
LS+ RFD+ +SPLT+K + AG+ MT VQEATL L+GKD + KAKTGTGK++
Sbjct: 77 ----LSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTV 132
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
AFLLP+IEAV+KA +S PPI VL++CPTRELA Q AAEA LLK H IGV ++
Sbjct: 133 AFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVI 192
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GGT+ +QRRL+ PCQILVATPGRL DHI+N SG + RLMG+K+LVLDEADHLLD+GF
Sbjct: 193 GGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGF 252
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQS 611
R+++E I+ +P++RQ+ LFSAT+ EVR+I + LKR+H +++ V G+ ET K+ Q
Sbjct: 253 RREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQM 312
Query: 612 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 671
++A + HF +L+ LLK+HI YKVI+FC+T MVT L+ LL ++ +NVRE++SRK
Sbjct: 313 YMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRK 372
Query: 672 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXX 731
PQ YR R+S+EFR SK +ILVTSDVSARG+DYPDV+ VVQ+G+P DREQYIH
Sbjct: 373 PQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRK 432
Query: 732 XXXXXXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHA 791
VLLLAPWEEYF + E ++ + +++ KEAAY A
Sbjct: 433 GKEGEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQA 492
Query: 792 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 846
WLGYY S ++I RD T LVELAN+F++S+GL PP + KMGLK++PGIR+
Sbjct: 493 WLGYYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRV 547
>UNIPROTKB|Q2KEF1 [details] [associations]
symbol:MGCH7_ch7g1085 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
GO:GO:0008026 ProteinModelPortal:Q2KEF1 Uniprot:Q2KEF1
Length = 568
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 166/474 (35%), Positives = 249/474 (52%)
Query: 386 ISPLTIKALTA-AGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLK 443
+ P+ + +T + +M+ VQ AT+ + + D + +AKTGTGK+IAFLLPA++ +L+
Sbjct: 83 LDPVLLDTITQDLKFDRMSPVQAATIRHLIADRGDVLAQAKTGTGKTIAFLLPALQTLLR 142
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
SS + VL++ PTRELA QIA EA ALL+ V T +GGT +QRR+
Sbjct: 143 RPSSRGND----VSVLVISPTRELALQIAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRI 198
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
CQIL+ TPGRL+DH+E +S ++ L + VLDEAD LLD+GF ++ IV LP
Sbjct: 199 LRG-CQILIGTPGRLMDHLEEQS-VAEMLQSVDTFVLDEADRLLDMGFMPQLKKIVAALP 256
Query: 564 RR----RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
R RQ +LFSAT+ + V ++S + L ++ +I T+ G T ++ Q + P+
Sbjct: 257 NRQKVPRQGMLFSATVAEHVAKVSSIALAPDYKFISTIPKGESNTHERVPQHLIEVPNFS 316
Query: 620 HFQI-----LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM-KM-NVREMYSRKP 672
L H L E ++K IVF T + +L + M + ++SR
Sbjct: 317 DTMAALVGALRHELAESA-NQDEFKAIVFAPTAALVDFYAAVLEGLPNMPRILTLHSRMT 375
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 732
Q R R++E++R S +LV +DV ARGMD+P VT+V QVG+P D+E YIH
Sbjct: 376 QSKRTRVTEDYRKSNATVLVATDVVARGMDFPSVTNVFQVGLPMDKESYIHRLGRTARAG 435
Query: 733 XXXXXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAW 792
+++ E YF + +++ K++ K AY +W
Sbjct: 436 AEGRGTFIVSAAESYFPRKVMKDFTFIDQPADLSALGEIK--EVAPKLEPYGK--AYQSW 491
Query: 793 LGYYNSI-REIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 844
LG+Y + +G D LV ANK A + G PPL + T KMGLK + G+
Sbjct: 492 LGFYKVFTKPLGWDNEQLVREANKLALEGFGAPEVPPLNKSTVGKMGLKGVKGL 545
>ASPGD|ASPL0000028276 [details] [associations]
symbol:AN5623 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:BN001305
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268799
ProteinModelPortal:C8VFX5 EnsemblFungi:CADANIAT00003447 OMA:STIGKMG
Uniprot:C8VFX5
Length = 567
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 156/470 (33%), Positives = 238/470 (50%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL G+ M+ VQ+ L+ + D +V+AKTGTGK++AFLLPA+ +++ S
Sbjct: 23 LQALNVLGFEYMSPVQQRVLTELPTWRSDCLVQAKTGTGKTVAFLLPALHCLIQGQSQVR 82
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGT-RFKVDQRRLESDP 507
V +LI+ PTRELA QIA L + VGGT R R + DP
Sbjct: 83 RGQVA---ILIITPTRELAQQIAKSCDELTSQLSRPLECHIAVGGTARASAHSRFMNGDP 139
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR- 566
ILVATPGRL D++ ++S + +L ++ LVLDEAD +L+ GF DV+ I+ +P +
Sbjct: 140 -SILVATPGRLKDYL-SESETAEKLKDIQTLVLDEADTMLETGFLADVKQILKLIPSKST 197
Query: 567 --QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH-FQI 623
Q + FSAT+P +V+ + +VL +T I TV T ++ Q ++ P F
Sbjct: 198 GWQGMCFSATLPPKVKDVVSVVLNPGYTSISTVDKNEPPTHERVPQYYVLMPSVAETFTT 257
Query: 624 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQLYRDRISE 681
L LL + K+IVF T + +L + + V E++SR Q R R +
Sbjct: 258 LSSLLAHE--SKKNTKIIVFGVTANMVALSHSAFANGLTPLKVFEIHSRLSQSARTRTTS 315
Query: 682 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLL 741
+F+ + IL SDV RGMD+P+V VVQVG+P + EQY+H V+LL
Sbjct: 316 QFKEADAGILFASDVIGRGMDFPNVDLVVQVGLPSNAEQYVHRVGRTARAGNDGRAVILL 375
Query: 742 APWEEYFXXXXXXXXXX---XXXXXXXNP-EIQLQMDNHMAKIDNNVKEAAYHAWLGYYN 797
E +F N + M +D K+ AY +++G++
Sbjct: 376 TESESFFLKANRHLPIQPHPDASSILANATSCSPAVTQAMYAVDETTKQRAYSSYIGFFA 435
Query: 798 S---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPG 843
++++ DK LV+LAN+ A + + PPP+ +K KMGLK +PG
Sbjct: 436 GSGLMKQLRLDKPGLVQLANELAIKGMACPEPPPMDKKIVGKMGLKGVPG 485
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 555 (200.4 bits), Expect = 4.0e-53, P = 4.0e-53
Identities = 153/474 (32%), Positives = 245/474 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP++RQ+LLFSAT K V+ +++L LK YI TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YIWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 677
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 738 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 793
+L+L P EE NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQ-DKDLKERAQRCFV 474
Query: 794 GYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPPPL-FRKTALKMGLKDI 841
Y S+ +EI D +TL ++A S+GL P + F + K K++
Sbjct: 475 SYIRSVYLMKNKEIF-DVSTLP--VPEYALSLGLAVAPRVRFLQKMQKQPTKEL 525
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 551 (199.0 bits), Expect = 1.2e-52, P = 1.2e-52
Identities = 149/458 (32%), Positives = 240/458 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP++RQ+LLFSAT K V+ +++L LK + Y+ TP ++Q+ ++ EL
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKYSTPATLEQNYIIC--EL 297
Query: 620 H--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 675
H +L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+
Sbjct: 298 HQKISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMR 353
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
R + EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 354 RMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDG 413
Query: 736 XXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHA 791
+L+L P EE NPE +Q ++++ +A+ D ++KE A
Sbjct: 414 EALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQ-DQDLKERAQRC 472
Query: 792 WLGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 826
++ Y S+ + +DK + +L ++A S+GL P
Sbjct: 473 FVSYIRSVY-LMKDKEVFNVSKLPITEYALSLGLAVAP 509
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 550 (198.7 bits), Expect = 1.5e-52, P = 1.5e-52
Identities = 149/458 (32%), Positives = 240/458 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP++RQ+LLFSAT K V+ +++L LK + Y+ TP ++Q+ ++ EL
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKYSTPATLEQNYIIC--EL 297
Query: 620 H--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 675
H +L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+
Sbjct: 298 HQKISVLFSFLRSHLTK----KSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMR 353
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
R + EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 354 RMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDG 413
Query: 736 XXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHA 791
+L+L P EE NPE +Q ++++ +A+ D ++KE A
Sbjct: 414 EALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKRLESFLAQ-DQDLKERAQRC 472
Query: 792 WLGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 826
++ Y S+ + +DK + +L ++A S+GL P
Sbjct: 473 FVSYIRSVY-LMKDKEVFDVNKLPITEYALSLGLAVAP 509
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 548 (198.0 bits), Expect = 1.0e-51, P = 1.0e-51
Identities = 150/472 (31%), Positives = 242/472 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSADGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP++RQ+LLFSAT K V+ +++L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRD 677
+L+ L+ H+ K IVF S+ LY + ++ V ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQMRRM 355
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 738 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 793
+L+L P EE NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQ-DQDLKERAQRCFI 474
Query: 794 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDI 841
Y S+ + +DK + +L + +A S+GL P + F + K K++
Sbjct: 475 SYIRSVY-LMKDKEIFDVSKLPISDYALSLGLAVAPRIRFLQRMQKQPSKEL 525
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 545 (196.9 bits), Expect = 3.0e-51, P = 3.0e-51
Identities = 149/472 (31%), Positives = 246/472 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--VSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP++RQ+LLFSAT K V+ +++L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 677
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 738 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 793
+L+L P E+ NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIKI-NPEKLIDVQKKLESILAQ-DQDLKERAQRCFV 473
Query: 794 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDI 841
Y S+ + +DK + +L ++A S+GL P + F + K K++
Sbjct: 474 SYVRSVY-LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKEL 524
>UNIPROTKB|Q13206 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
Length = 875
Score = 545 (196.9 bits), Expect = 4.3e-51, P = 4.3e-51
Identities = 149/472 (31%), Positives = 246/472 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--VSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP++RQ+LLFSAT K V+ +++L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 677
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 738 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 793
+L+L P E+ NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIKI-NPEKLIDVQKKLESILAQ-DQDLKERAQRCFV 473
Query: 794 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDI 841
Y S+ + +DK + +L ++A S+GL P + F + K K++
Sbjct: 474 SYVRSVY-LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKEL 524
>POMBASE|SPAC1093.05 [details] [associations]
symbol:SPAC1093.05 "ATP-dependent RNA helicase Hca4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1093.05 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 PIR:T50068 RefSeq:NP_594652.1
ProteinModelPortal:Q9UTP9 SMR:Q9UTP9 STRING:Q9UTP9
EnsemblFungi:SPAC1093.05.1 GeneID:2541630 KEGG:spo:SPAC1093.05
NextBio:20802723 Uniprot:Q9UTP9
Length = 735
Score = 530 (191.6 bits), Expect = 6.8e-50, P = 6.8e-50
Identities = 144/456 (31%), Positives = 234/456 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E ++ T AL A +I +T +Q+ + + L+G+D + AKTG+GK++AF++P IE
Sbjct: 41 FAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIEN 100
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + +S L L++ PTRELA Q + + + H L ++GG +K ++
Sbjct: 101 LYRKKWTSLDGLG----ALVISPTRELAIQTFETLVKIGRLHSFSAGL-IIGGNNYKEEK 155
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGRLL HI+ ++ GL+ML+LDEAD +LD+GFR ++ IV
Sbjct: 156 ERLSR--MNILVCTPGRLLQHIDQ--AVNFDTSGLQMLILDEADRILDMGFRTTLDAIVS 211
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP RQ++LFSAT K V+ +++L L+ +I + TP + Q L P
Sbjct: 212 SLPVHRQTMLFSATQTKSVKDLARLSLQNPD-FISVHENDTSSTPSNLNQFYLTVPLTEK 270
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 678
IL ++ H+ +K IVF S+ +Y R M+ +++ ++ ++ Q R
Sbjct: 271 LDILFGFIRTHL----KFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTE 326
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 738
++ +F +S+ ++L +D+ ARG+D+P V V+Q+ P D + YIH +
Sbjct: 327 VTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNAL 386
Query: 739 LLLAPWEEYFXXXXXXXXXXXXXXXXXNPE---IQLQMDNHMAKIDNNVKEAAYHAWLGY 795
LLL P EE F + + I+ Q+ N K DN++K A++ Y
Sbjct: 387 LLLLPSEEAFLKRLESKKIAVERINVKDGKKTSIRNQLQNLCFK-DNDIKYIGQKAFISY 445
Query: 796 YNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 828
SI + +DK L +L FA S+GL P +
Sbjct: 446 LRSIY-LQKDKDVFQLDKLPVEAFADSLGLPGTPKI 480
>GENEDB_PFALCIPARUM|PF13_0037 [details] [associations]
symbol:PF13_0037 "DEAD box helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844509
HSSP:P10081 KO:K01509 RefSeq:XP_001349800.1
ProteinModelPortal:Q8IEP2 EnsemblProtists:PF13_0037:mRNA
GeneID:814016 KEGG:pfa:PF13_0037 EuPathDB:PlasmoDB:PF3D7_1307300
HOGENOM:HOG000280785 OMA:YKIIVFF ProtClustDB:CLSZ2433434
Uniprot:Q8IEP2
Length = 630
Score = 520 (188.1 bits), Expect = 7.3e-50, P = 7.3e-50
Identities = 143/463 (30%), Positives = 229/463 (49%)
Query: 399 YIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
Y + T VQ ++ K D +++AKTGTGK+IA+LL +I ++K S
Sbjct: 170 YKEFTDVQRIVYDNIIKEKKQNDLLIQAKTGTGKTIAYLLLSINDIIKNKILS------- 222
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
++ LI+ PTRELA+QI E LL I VLTL GG + + DQ + I++ T
Sbjct: 223 VHTLIIVPTRELANQIYNECKLLLTYKHNINVLTLTGGIKRRDDQLNIRRIKPDIIICTV 282
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDH E+ + LKML++DEAD LL G+ D+ ++ LP R+++L SAT+
Sbjct: 283 GRLLDHFESTYLFNTLFENLKMLIIDEADQLLSTGYENDIHRLLTYLPSNRRNILLSATL 342
Query: 576 PKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI-LG 634
+ I + + K ++ Y++ V S T ++ Q L IL++LL EH+ L
Sbjct: 343 GYNLDEIRKKMCKSDYIYLNCVKDISKHTSDQLIQYVLFHKAIDTTIILYNLLIEHMRLN 402
Query: 635 TPDYKVIVFCSTGMVTSLL-YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 693
YK+IVF T TS + ++K++V E++ +K +R + F IL T
Sbjct: 403 QFTYKIIVFFPTARATSFYAQFFINQLKISVYEIHRKKEMAHRQITANRFSMESVGILFT 462
Query: 694 SDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXX 753
SD+S+RG++YPD+T ++QV P REQYIH ++LL +E F
Sbjct: 463 SDISSRGLNYPDITLIIQVNTPISREQYIHRVGRTARSNKKGMAIILLNEADELFYQEIK 522
Query: 754 XXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT----- 808
+ + N+++ +N + Y A+ YY+SI + K T
Sbjct: 523 DLNIQKLNAQNYTLK-NTNLSNYLSTWMSNT-QLLYLAY-AYYSSILRFYKTKYTHLKIN 579
Query: 809 ---LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 848
+++ N S GL P + R A + +++ +++RK
Sbjct: 580 DDEIIDAVNNMLLSTGLVEQPYISRNLATTLNMQNNVKLKIRK 622
>UNIPROTKB|Q8IEP2 [details] [associations]
symbol:PF13_0037 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844509 HSSP:P10081 KO:K01509 RefSeq:XP_001349800.1
ProteinModelPortal:Q8IEP2 EnsemblProtists:PF13_0037:mRNA
GeneID:814016 KEGG:pfa:PF13_0037 EuPathDB:PlasmoDB:PF3D7_1307300
HOGENOM:HOG000280785 OMA:YKIIVFF ProtClustDB:CLSZ2433434
Uniprot:Q8IEP2
Length = 630
Score = 520 (188.1 bits), Expect = 7.3e-50, P = 7.3e-50
Identities = 143/463 (30%), Positives = 229/463 (49%)
Query: 399 YIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
Y + T VQ ++ K D +++AKTGTGK+IA+LL +I ++K S
Sbjct: 170 YKEFTDVQRIVYDNIIKEKKQNDLLIQAKTGTGKTIAYLLLSINDIIKNKILS------- 222
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
++ LI+ PTRELA+QI E LL I VLTL GG + + DQ + I++ T
Sbjct: 223 VHTLIIVPTRELANQIYNECKLLLTYKHNINVLTLTGGIKRRDDQLNIRRIKPDIIICTV 282
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDH E+ + LKML++DEAD LL G+ D+ ++ LP R+++L SAT+
Sbjct: 283 GRLLDHFESTYLFNTLFENLKMLIIDEADQLLSTGYENDIHRLLTYLPSNRRNILLSATL 342
Query: 576 PKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI-LG 634
+ I + + K ++ Y++ V S T ++ Q L IL++LL EH+ L
Sbjct: 343 GYNLDEIRKKMCKSDYIYLNCVKDISKHTSDQLIQYVLFHKAIDTTIILYNLLIEHMRLN 402
Query: 635 TPDYKVIVFCSTGMVTSLL-YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 693
YK+IVF T TS + ++K++V E++ +K +R + F IL T
Sbjct: 403 QFTYKIIVFFPTARATSFYAQFFINQLKISVYEIHRKKEMAHRQITANRFSMESVGILFT 462
Query: 694 SDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXX 753
SD+S+RG++YPD+T ++QV P REQYIH ++LL +E F
Sbjct: 463 SDISSRGLNYPDITLIIQVNTPISREQYIHRVGRTARSNKKGMAIILLNEADELFYQEIK 522
Query: 754 XXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT----- 808
+ + N+++ +N + Y A+ YY+SI + K T
Sbjct: 523 DLNIQKLNAQNYTLK-NTNLSNYLSTWMSNT-QLLYLAY-AYYSSILRFYKTKYTHLKIN 579
Query: 809 ---LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 848
+++ N S GL P + R A + +++ +++RK
Sbjct: 580 DDEIIDAVNNMLLSTGLVEQPYISRNLATTLNMQNNVKLKIRK 622
>DICTYBASE|DDB_G0284017 [details] [associations]
symbol:ddx10 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0284017 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AAFI02000059 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HSSP:P26196 RefSeq:XP_638786.1 ProteinModelPortal:Q54Q94
STRING:Q54Q94 PRIDE:Q54Q94 EnsemblProtists:DDB0234197
GeneID:8624375 KEGG:ddi:DDB_G0284017 OMA:AMNILIA Uniprot:Q54Q94
Length = 878
Score = 528 (190.9 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
Identities = 150/462 (32%), Positives = 235/462 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS LT+KALT + ++++T +Q A+L L G+D + AKTG+GK+++F+LP +E
Sbjct: 143 FKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILET 202
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + I ++L PTRELA QI A+ K H L ++GG V Q
Sbjct: 203 LWRNRWGRDDG----IGAIVLSPTRELAIQIFDVLKAVGKYHTFSAGL-IIGGRN--VQQ 255
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + + IL+ATPGRLL H++ G LK+LVLDEAD +LDLGF K + +IV+
Sbjct: 256 EKDKINAMNILIATPGRLLQHMDETYGFDCS--NLKILVLDEADRILDLGFSKCLNSIVE 313
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LPR RQ+LLFSAT K +R +++L L+ E YI TP + Q+ V P E+
Sbjct: 314 NLPRERQTLLFSATQTKSIRDLARLSLQ-EPEYISVYEKDITTTPQNLTQTLCVIPLEMK 372
Query: 621 FQILHHLLKEHILGTPDYKVIVF---CSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+L +K H+ K+IVF C + LL + ++ + Q R
Sbjct: 373 LNMLFSFIKTHLTS----KIIVFFASCKQVRFAHETFKLLNP-GTTLFPLHGKMKQWTRL 427
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+ E+F K L +D++ARG+D+P V V+QV P D E YIH
Sbjct: 428 EVFEDFCKKKAGTLFATDIAARGLDFPAVEWVIQVDCPDDIETYIHRVGRTARNDAPGQS 487
Query: 738 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKI---DNNVKEAAYHAWLG 794
+ +L P E+ NPE + +D+ ++ ++K A +++
Sbjct: 488 ITILLPSEKDGMVNLMEKQKMKFEILEPNPEKLVSIDSKLSSFLSEKTDLKYLAQKSFVS 547
Query: 795 YYNSI-REIGRDKTTLVEL-ANKFAQSIGLQRPPPL-FRKTA 833
Y S+ R+ ++ + EL N+F++S+GL P + F K +
Sbjct: 548 YLRSVYRQSNKEIFKIQELNINEFSKSLGLLGTPNIQFGKAS 589
Score = 45 (20.9 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 248 NKAKPFAR--NLGNNRENGDSKNMSEFMKKKCFVGKRRFKRN 287
+K KP + N NN+ N ++ N +E K K +F ++
Sbjct: 6 SKQKPQKKENNNNNNKNNNNNNNKTENNKTNKDFTKNKFDKD 47
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 497 (180.0 bits), Expect = 5.9e-49, Sum P(2) = 5.9e-49
Identities = 139/452 (30%), Positives = 236/452 (52%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K ++ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K
Sbjct: 173 VSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLK 232
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V+IL PTRELA Q L+ +H L ++GG+ + ++L
Sbjct: 233 FMPRNGTG----VIILSPTRELAMQTYGVLKELMNHHVHTYGL-IMGGSNRSAEAQKL-G 286
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
+ I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP+R
Sbjct: 287 NGINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEEEMKQIIKLLPKR 344
Query: 566 RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 625
RQ++LFSAT ++V ++++ LK+E Y+ T ++Q +V P E F +L
Sbjct: 345 RQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLF 404
Query: 626 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 685
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 405 TFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQFCN 460
Query: 686 SKRLILVTSDVSARGMDYPDVTSVVQVGIP--PDREQYIHXXXXXXXXXXXXXXVLLLAP 743
++ IL+ +DV+ARG+D P+V +VQ P P +++YIH LL+
Sbjct: 461 AESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKQKEYIHRVGRTARGINGRGHALLILR 520
Query: 744 WEEY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYY 796
EE + +IQ Q++ + K + + +EA Y A++ Y
Sbjct: 521 PEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEA-YKAYIRAY 579
Query: 797 NS--IREIGRDKTTLVELANKFAQSIGLQRPP 826
+S +++I ++L NK + S G + PP
Sbjct: 580 DSHSLKQIYNVGN--LDL-NKVSLSFGFKVPP 608
Score = 37 (18.1 bits), Expect = 5.9e-49, Sum P(2) = 5.9e-49
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 93 PMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQ 127
P E KA A+ + AED +D G ++E+
Sbjct: 112 PEGGTETKKAKAEEDVSVEAEDEDGQDTGEKEAEE 146
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 512 (185.3 bits), Expect = 6.4e-49, P = 6.4e-49
Identities = 122/344 (35%), Positives = 196/344 (56%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F I T K++ G+ +MT +Q ++ LEGKD + A+TG+GK++AFL+PAIE
Sbjct: 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFKVD 499
++K+ V+I+ PTRELA QI A L+K H G++ +GG K +
Sbjct: 181 LVKSNFKPRNGTG----VIIISPTRELALQIYGVARELMKYHTQTHGIV--IGGASKKPE 234
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ RLE +LVATPGRLLDH++N G + LK L++DEAD +L++GF +++ I+
Sbjct: 235 EERLEKG-VNLLVATPGRLLDHLQNTKGFITK--NLKCLIIDEADRILEVGFEEEMHQII 291
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+P+ RQ++LFSAT ++V I+++ L Y+ + T ++Q +V P E
Sbjct: 292 KKVPKTRQTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSER 351
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
F +L+ LK+++ K+IVF S+ LL + + V E++ R+ Q R
Sbjct: 352 RFLLLYTFLKKNL----SKKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNT 407
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
EF +++ IL+ +DV+ARG+D P V ++Q P D ++YIH
Sbjct: 408 FYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIH 451
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 512 (185.3 bits), Expect = 6.4e-49, P = 6.4e-49
Identities = 141/450 (31%), Positives = 235/450 (52%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q T+ LEG+D + AKTG+GK++AFL+P+IE + K
Sbjct: 168 VSENTLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLK 227
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V++L PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 228 FMPRNGTG----VIVLSPTRELAMQTYGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-A 281
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
+ ILVATPGRLLDH++N G + L+ L++DEAD +L++GF ++++ I+ LP++
Sbjct: 282 NGVNILVATPGRLLDHLQNTPGFMFK--NLQCLIIDEADRILEVGFEEELKQIIKLLPKK 339
Query: 566 RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 625
RQS+LFSAT ++V ++++ LK+E Y+ T ++Q +V P E F +L
Sbjct: 340 RQSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLLLF 399
Query: 626 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 685
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 400 TFLKKN----RKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCN 455
Query: 686 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 745
+ IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ E
Sbjct: 456 ADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILRPE 515
Query: 746 EY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS 798
E F +IQ Q+D + K + + +EA Y +++ Y+S
Sbjct: 516 ELGFLRFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQEA-YKSYVRAYDS 574
Query: 799 --IREIGRDKTTLVELANKFAQSIGLQRPP 826
+++I +T ++L K A S G + PP
Sbjct: 575 HSLKQIYNVET--LDLP-KVAMSFGFKVPP 601
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 488 (176.8 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 123/357 (34%), Positives = 197/357 (55%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPR 249
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 250 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 303
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 304 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 361
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 362 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 421
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 422 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 477
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 478 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 534
Score = 59 (25.8 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 84 PDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDG---PVKSEQRPRSGAEANQRPR 140
P+SE+ + K + V K AED+ +DG P ++E R + +
Sbjct: 103 PNSESKKKKKKKKRKVVDDAGPDSKKAKAEDIGEAEDGAQAPEETENRVEKPDDEGEDSE 162
Query: 141 LAGAPIDLRGLISD 154
+ P+ L G D
Sbjct: 163 VPSLPLGLTGAFED 176
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 488 (176.8 bits), Expect = 4.8e-48, Sum P(2) = 4.8e-48
Identities = 123/357 (34%), Positives = 197/357 (55%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 194 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPR 253
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 254 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 307
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 308 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 365
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 366 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 425
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 426 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 481
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 482 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 538
Score = 59 (25.8 bits), Expect = 4.8e-48, Sum P(2) = 4.8e-48
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 84 PDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDG---PVKSEQRPRSGAEANQRPR 140
P+SE+ + K + V K AED+ +DG P ++E R + +
Sbjct: 107 PNSESKKKKKKKKRKVVDDAGPDSKKAKAEDIGEAEDGAQAPEETENRVEKPDDEGEDSE 166
Query: 141 LAGAPIDLRGLISD 154
+ P+ L G D
Sbjct: 167 VPSLPLGLTGAFED 180
>UNIPROTKB|F1P0I3 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074980 IPI:IPI00595697
OMA:ADKVIEP EMBL:AADN02005060 Ensembl:ENSGALT00000027709
Uniprot:F1P0I3
Length = 875
Score = 520 (188.1 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 143/472 (30%), Positives = 239/472 (50%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 133 ELLYRLQWTSADGLG----VLIISPTRELAFQTFKVLRKVGKNHDFSAGL-IIGGKDLKE 187
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 188 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 243
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
++ LP++RQ+LLFSAT K V+ +++L LK + Y+ TP + Q+ +V +
Sbjct: 244 IENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKFSTPATLDQNYIVCELQ 302
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 676
+L+ L+ H+ K IVF ++ L+ + +++ + V ++ ++ Q+ R
Sbjct: 303 HKINVLYSFLRSHL----KKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKR 358
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
+ F K +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 359 MEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGE 418
Query: 737 XVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAW 792
+L+L P EE NPE IQ +M +A+ D +KE A +
Sbjct: 419 ALLVLLPSEEKGMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQ-DQELKEKAQRCF 477
Query: 793 LGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPPPL--FRKTALKMGLKD 840
+ Y S+ + ++ + +L ++A S+GL P + +K ++ +K+
Sbjct: 478 VSYLRSVYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQKVQKQLSVKE 529
>UNIPROTKB|Q5ZJF6 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
EMBL:AJ720478 IPI:IPI00595697 RefSeq:NP_001073193.1
UniGene:Gga.15096 HSSP:P26196 ProteinModelPortal:Q5ZJF6 SMR:Q5ZJF6
STRING:Q5ZJF6 GeneID:418965 KEGG:gga:418965 CTD:1662
HOVERGEN:HBG102756 InParanoid:Q5ZJF6 OrthoDB:EOG4BK536
NextBio:20822084 Uniprot:Q5ZJF6
Length = 875
Score = 520 (188.1 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 143/472 (30%), Positives = 239/472 (50%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 133 ELLYRLQWTSADGLG----VLIISPTRELAFQTFKVLRKVGKNHDFSAGL-IIGGKDLKE 187
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 188 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 243
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
++ LP++RQ+LLFSAT K V+ +++L LK + Y+ TP + Q+ +V +
Sbjct: 244 IENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKFSTPATLDQNYIVCELQ 302
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 676
+L+ L+ H+ K IVF ++ L+ + +++ + V ++ ++ Q+ R
Sbjct: 303 HKINVLYSFLRSHL----KKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKR 358
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
+ F K +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 359 MEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGE 418
Query: 737 XVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAW 792
+L+L P EE NPE IQ +M +A+ D +KE A +
Sbjct: 419 ALLVLLPSEEKGMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQ-DQELKEKAQRCF 477
Query: 793 LGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPPPL--FRKTALKMGLKD 840
+ Y S+ + ++ + +L ++A S+GL P + +K ++ +K+
Sbjct: 478 VSYLRSVYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQKVQKQLSVKE 529
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 477 (173.0 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 157/524 (29%), Positives = 252/524 (48%)
Query: 324 KYDMKITKRVPLKSLEDEHDFEEQ---------VELIRKEISXXXXXXXXXXXXXXXXXP 374
K D KI + +P ED+++ EE+ VE +E+
Sbjct: 27 KNDKKIAEELPQD--EDDYEQEEENEDADQNTSVESESEELDNENEDERVQKSVNLNASS 84
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
++F + +S KA+ G+ MT +Q+ ++ L G+D + AKTG+GK++AFL
Sbjct: 85 TSDIEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFL 144
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK-NHDGIGVLTLV 491
+P IE + LK + T V+I+ PTRELA QI A LLK +H G++ +
Sbjct: 145 IPTIEMLYALKFKPRNGTG------VIIISPTRELALQIFGVAKELLKYHHQTFGIV--I 196
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG + + +L +LVATPGRLLDH++N G R L+ LV+DEAD +L++GF
Sbjct: 197 GGANRRAEADKLVKG-VNLLVATPGRLLDHLQNTKGFVFR--NLRSLVIDEADRILEIGF 253
Query: 552 RKDVENIVDCLP-RRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IK 609
++ I+ LP RQ+LLFSAT +V ++++ LK Y++ V G + V+ ++
Sbjct: 254 EDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVN-VDSGKPTSTVEGLE 312
Query: 610 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 669
Q +V + F +L LK ++ KVIVF S+ + LL + + V +++
Sbjct: 313 QGYVVVDSDKRFLLLFSFLKRNL----KKKVIVFMSSCASVKYMAELLNYIDLPVLDLHG 368
Query: 670 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXX 729
++ Q R EF +++ IL+ ++V+ARG+D P V +VQ P D YIH
Sbjct: 369 KQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTA 428
Query: 730 XXXXXXXXVLL-LAPWEEYFXXXXXXXXXXXXXXXX-XNP--EIQLQMDNHMAK---IDN 782
L+ LAP E F N +Q Q++ ++K +
Sbjct: 429 RGTKGTGKSLMFLAPSELGFLRYLKTAKVSLNEFEFPANKVANVQSQLEKLVSKNYYLQQ 488
Query: 783 NVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 826
+ K+ Y ++L Y S ++LA K A+S G PP
Sbjct: 489 SAKDG-YRSYLQAYASYSLKSIFDINKLDLA-KVAKSFGFAHPP 530
Score = 40 (19.1 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 11/67 (16%), Positives = 33/67 (49%)
Query: 71 RSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPR 130
+S+++ K + + + + KP+ D K +A+ ++ ED + +++ ++Q
Sbjct: 3 KSELKRKKHQSGNEEVKEKRQKPLKND---KKIAEELPQD--EDDYEQEEENEDADQNTS 57
Query: 131 SGAEANQ 137
+E+ +
Sbjct: 58 VESESEE 64
>ASPGD|ASPL0000061778 [details] [associations]
symbol:AN0589 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 RefSeq:XP_658193.1
ProteinModelPortal:Q5BFU1 SMR:Q5BFU1 STRING:Q5BFU1
EnsemblFungi:CADANIAT00002085 GeneID:2876356 KEGG:ani:AN0589.2
HOGENOM:HOG000268801 OMA:MFERKNQ OrthoDB:EOG4R53B0 Uniprot:Q5BFU1
Length = 812
Score = 512 (185.3 bits), Expect = 7.5e-47, P = 7.5e-47
Identities = 148/455 (32%), Positives = 228/455 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+ LT++ + +T +Q +S L+G+D + AKTG+GK++AFL+P +E
Sbjct: 50 FSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILEN 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S L LI+ PTRELA QI E + + + ++GG K +Q
Sbjct: 110 LYRKQWSDHDGLG----ALIISPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLKEEQ 164
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + L+MLVLDEAD ++D+GF+K V+ I+
Sbjct: 165 ERLGR--MNILVCTPGRMLQHLDQTAFFET--YNLQMLVLDEADRIMDMGFQKTVDAIIG 220
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP RQ+LLFSAT K+V +++L L+ + Y+ S TP K++Q +V P
Sbjct: 221 HLPPERQTLLFSATQTKKVSDLARLSLQ-DPEYVAVHEAASSATPSKLQQHYVVTPLPQK 279
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDR 678
L ++ ++ K IVF S+G +Y R M+ + ++ R+ Q R
Sbjct: 280 LDTLWSFIRSNLKS----KTIVFMSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQGGRLD 335
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 738
I+ F ++ +L ++DV+ARG+D+P V V+Q+ P D + YIH V
Sbjct: 336 ITTRFSQAQHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAV 395
Query: 739 LLLAPWEE--YFXXXXXXXXXXXXXXXXXNPE--IQLQMDNHMAKIDNNVKEAAYHAWLG 794
L L P EE N + I+ Q+ N K D +K A++
Sbjct: 396 LFLDPSEEKGMLRRLEQKRVTVERINVRANKQQSIKNQLQNMCFK-DPELKYLGQKAFIS 454
Query: 795 YYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 826
Y S+ I +DK T L EL + FA S+GL P
Sbjct: 455 YVKSVY-IQKDKETFNLKELKLDDFAASLGLPGAP 488
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 493 (178.6 bits), Expect = 9.9e-47, P = 9.9e-47
Identities = 126/357 (35%), Positives = 193/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ +MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 180 TLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPR 239
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 240 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG--IN 293
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 294 IIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTM 351
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ V T ++Q +V P E F +L LK
Sbjct: 352 LFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLK 411
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 412 KN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 467
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 468 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 524
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 491 (177.9 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 126/357 (35%), Positives = 192/357 (53%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 182 TLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPR 241
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 242 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG--IN 295
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 296 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTM 353
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ V T ++Q +V P E F +L LK
Sbjct: 354 LFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLK 413
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 414 KN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 469
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 470 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 526
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 491 (177.9 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
Identities = 126/357 (35%), Positives = 192/357 (53%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 194 TLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPR 253
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 254 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG--IN 307
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 308 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTM 365
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ V T ++Q +V P E F +L LK
Sbjct: 366 LFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLK 425
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 426 KN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 481
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 482 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 538
Score = 37 (18.1 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 119 DDGPVKSEQRPRSGAEANQRPRLAG 143
D P + + G EA + P AG
Sbjct: 121 DTEPDPKKAKTEEGTEAREEPEGAG 145
>SGD|S000003570 [details] [associations]
symbol:HCA4 "DEAD box RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0005730 "nucleolus" evidence=IEA;IC]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA;IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003570
GO:GO:0005524 GO:GO:0005730 EMBL:BK006943 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 EMBL:U72149 EMBL:Z49308 EMBL:AY693118
PIR:S56805 RefSeq:NP_012501.1 ProteinModelPortal:P20448 SMR:P20448
DIP:DIP-6819N IntAct:P20448 MINT:MINT-620511 STRING:P20448
PaxDb:P20448 PeptideAtlas:P20448 EnsemblFungi:YJL033W GeneID:853419
KEGG:sce:YJL033W CYGD:YJL033w GeneTree:ENSGT00550000074980
NextBio:973942 Genevestigator:P20448 GermOnline:YJL033W
Uniprot:P20448
Length = 770
Score = 507 (183.5 bits), Expect = 2.0e-46, P = 2.0e-46
Identities = 154/489 (31%), Positives = 243/489 (49%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + T+ + LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYR---EKWTEF-DGLGALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGL--GSVE----TPVKI 608
++ IV L RQ+LLFSAT + V +++L L ++ + T + GSV TP +
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLT-DYKTVGTHDVMDGSVNKEASTPETL 266
Query: 609 KQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVRE 666
+Q + P IL +K H+ K+IVF S+ +Y R+M+ +++
Sbjct: 267 QQFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMH 322
Query: 667 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXX 726
++ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIH
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 727 XXXXXXXXXXXVLLLAPWE-EYFXXXXXXXXXX---XXXXXXXNPEIQLQMDNHMAKIDN 782
+++L P E E F I+ Q+ + + K D
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-DP 441
Query: 783 NVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGLK 839
+K A++ Y SI + +DK EL +FA S+GL P K +K G+K
Sbjct: 442 ELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAP----KIKMK-GMK 495
Query: 840 DIPGIRLRK 848
I + RK
Sbjct: 496 TIEQAKERK 504
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 485 (175.8 bits), Expect = 7.1e-46, Sum P(2) = 7.1e-46
Identities = 123/357 (34%), Positives = 195/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 189 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPR 248
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ H L ++GG+ + ++L +
Sbjct: 249 NGTG----VLILSPTRELAMQTFGVLKELMMYHVHTYGL-IMGGSNRSAEAQKL-GNGIN 302
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 303 IIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 360
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 361 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 420
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 421 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 476
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 477 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILHPEE 533
Score = 41 (19.5 bits), Expect = 7.1e-46, Sum P(2) = 7.1e-46
Identities = 13/66 (19%), Positives = 28/66 (42%)
Query: 68 ARVRSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQ 127
++ + + + K+ D A PD++ ++ + E + G + E+D V S
Sbjct: 107 SKKKKKRKRKMVDDAGPDTKKSKTEDKGDSEEGTQAPEETENNGEKPDDEEEDSEVPSLP 166
Query: 128 RPRSGA 133
+GA
Sbjct: 167 LGLTGA 172
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 493 (178.6 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 137/450 (30%), Positives = 230/450 (51%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 194 VSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR 253
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V+I+ PTREL+ Q L+ +H L + GG+ +V+ +L
Sbjct: 254 FMPRNGTG----VIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEKLGK 308
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ LP+R
Sbjct: 309 G-INILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLLPKR 365
Query: 566 RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 625
RQ++LFSAT + +S+L LK E Y+ T ++Q +V P E +L
Sbjct: 366 RQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLF 425
Query: 626 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 685
LK++ KV+VF S+ M + L + + V ++ ++ Q R +F
Sbjct: 426 TFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCN 481
Query: 686 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 745
++ IL+ +DV+ARG+D P V +VQ P D +YIH LLL E
Sbjct: 482 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 541
Query: 746 EY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS 798
E + +IQLQ++ +AK ++ + KEA + +++ Y+S
Sbjct: 542 ELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEA-FKSYVRAYDS 600
Query: 799 --IREIGRDKTTLVELANKFAQSIGLQRPP 826
+++I T ++L A+S G PP
Sbjct: 601 HQLKQIFNVNT--LDL-QAVAKSFGFLVPP 627
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 486 (176.1 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 122/357 (34%), Positives = 196/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 249
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 250 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNGIN 303
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 304 IIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 361
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 362 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 421
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 422 KN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 477
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
L+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 478 TLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 534
Score = 38 (18.4 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 68 ARVRSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWN-EDDGPVKSE 126
++ + + + K+ + A+PD++ + + E A + + E N ED+ V S
Sbjct: 107 SKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEKPDNDEDESEVPSL 166
Query: 127 QRPRSGA 133
+GA
Sbjct: 167 PLGLTGA 173
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 479 (173.7 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 142/456 (31%), Positives = 231/456 (50%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I++ FD +S T A+ G+ MT++Q ++ LEGKD + A+TG+GK++AFL
Sbjct: 85 IMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFL 144
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+PA+E + K S V+++CPTRELA Q A LLK+H V ++GG
Sbjct: 145 IPAVELLFKERFSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHSQT-VSMVIGGN 199
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ + +R+ S +++ATPGRLLDH++N + LK LV+DEAD +L+ F +D
Sbjct: 200 NRRSEAQRIASGS-NLVIATPGRLLDHLQNTKAFIYK--HLKCLVIDEADRILEENFEED 256
Query: 555 VENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSVETPVKIKQSCL 613
+ I+ LP+ RQ+ LFSAT +V+ ++++ L H +D G V T ++Q
Sbjct: 257 MNKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDD-GRRKV-TNEGLEQGYC 314
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
V P + +L LK+++ + K++VF ST +++ ++V +++ Q
Sbjct: 315 VVPSKQRLILLISFLKKNL----NKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQ 370
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDRE-QYIHXXXXXXXXX 732
R + +F +K+ IL+ +DV+ARG+D P V ++Q PPD+ +YIH
Sbjct: 371 NRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYD-PPDKPTEYIHRVGRTARGE 429
Query: 733 XXXXXVLL-LAPWEEYFXXXXXXXXXXXXXXXXXNPE---IQLQMDNHMAKIDNNVKEA- 787
LL L P E F +Q ++ +AK N K A
Sbjct: 430 GAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQSALEKCVAKDYNLNKLAK 489
Query: 788 -AYHAWLGYYNS--IREIGR-DKTTLVELANKFAQS 819
AY A+L YNS +++I + L+ +A F S
Sbjct: 490 DAYRAYLSAYNSHSLKDIFNVHRLDLLAVAESFCFS 525
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 485 (175.8 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 122/357 (34%), Positives = 197/357 (55%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 187 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 246
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 247 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 300
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 301 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 358
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 359 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 418
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 419 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 474
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 475 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 531
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 485 (175.8 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 122/357 (34%), Positives = 197/357 (55%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 191 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 250
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 251 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 304
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 305 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 362
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 363 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 422
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 423 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 478
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 479 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 535
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 475 (172.3 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 125/347 (36%), Positives = 192/347 (55%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 169
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 170 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 221
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 222 QEATKLAKG-VNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 277
Query: 558 IVDCLPRR-RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
I+ LP RQS+LFSAT +V ++++ L+ YI+ V V T ++Q +V
Sbjct: 278 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 337
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 338 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 393
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
EF +K+ ILV +DV+ARG+D P V +VQ P D YIH
Sbjct: 394 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIH 440
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 475 (172.3 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 125/347 (36%), Positives = 192/347 (55%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 169
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 170 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 221
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 222 QEATKLAKG-VNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 277
Query: 558 IVDCLPRR-RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
I+ LP RQS+LFSAT +V ++++ L+ YI+ V V T ++Q +V
Sbjct: 278 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 337
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 338 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 393
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
EF +K+ ILV +DV+ARG+D P V +VQ P D YIH
Sbjct: 394 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIH 440
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 495 (179.3 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 136/457 (29%), Positives = 232/457 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S T+K L A Y Q T +Q T+ L+G+D + AKTG+GK++AFL+P +E
Sbjct: 71 KFSDFPLSKKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLE 130
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + ++ L LI+ PTRELA Q + KNH+ L ++GG K +
Sbjct: 131 CLYREQWTAMDGLG----ALIISPTRELAYQTFEVLRKVGKNHEFSAGL-VIGGKDLKDE 185
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++ I++ TPGRLL H++ + + L MLVLDEAD +LD+GF + IV
Sbjct: 186 SEKIHRT--NIIICTPGRLLQHMDETA--TFHASDLHMLVLDEADRILDMGFADTLNAIV 241
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP+ RQ+LLFSAT + V+ +++L LK + Y+ TP ++Q+ +V EL
Sbjct: 242 ENLPKSRQTLLFSATQTRSVKDLARLSLK-DPEYVWVHEQAKFSTPATLEQNYVVC--EL 298
Query: 620 HFQI--LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 675
H ++ L+ L+ H+ K+IVF + L+ + ++ ++V ++ ++ Q+
Sbjct: 299 HQKVNMLYSFLRSHL----QKKIIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMK 354
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
R + +F +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 355 RVEVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGG 414
Query: 736 XXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHA 791
+L+L P EE NPE +Q +++ +A+ + KE A
Sbjct: 415 EALLVLLPSEEKGMISQLQEKKVPINKIQVNPEKLMSVQQKLEAFLAQ-EKEQKERAQRC 473
Query: 792 WLGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPP 826
++ Y S+ + +D +++L ++A S+GL P
Sbjct: 474 FVSYLRSVYLMKNKDVFDVLQLKLPEYAMSLGLAVAP 510
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 471 (170.9 bits), Expect = 2.9e-44, P = 2.9e-44
Identities = 146/501 (29%), Positives = 241/501 (48%)
Query: 339 EDEHDFEE-QVELIRKEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKALTAA 397
EDE EE + + ++++ P K+F E G+S T++ +
Sbjct: 87 EDEEKKEEDEKDNVKEDSGKANVPDLPSVDAVSLPQPDGGPKKFTELGLSEKTLQGIKEM 146
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
G+ MT +Q+ T+ L G+D + AKTG+GK++AFL+PAIE +L A
Sbjct: 147 GFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE-MLSALRFKPRNGTG--- 202
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFKVDQRRLESDPCQILVATPG 516
V+++ PTRELA QI A LL H G++ +GG + + +L +L+ATPG
Sbjct: 203 VIVVSPTRELALQIFGVARELLTAHSQTYGIV--IGGANRRAEAEKLTKG-VNLLIATPG 259
Query: 517 RLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATM 575
RLLDH++N G + LK LV+DEAD +L++GF ++ I+ LP RQ++LFSAT
Sbjct: 260 RLLDHLQNTPGFVFK--NLKTLVIDEADRILEVGFEDEMRQIIKILPNEDRQTMLFSATQ 317
Query: 576 PKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGT 635
+V ++++ L+ YI+ T ++Q ++ + F +L LK ++
Sbjct: 318 TTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNL--- 374
Query: 636 PDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSD 695
K+IVF S+ LL + + V +++ ++ Q R EF +K+ +L+ +D
Sbjct: 375 -KKKIIVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTD 433
Query: 696 VSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL-LAPWEEYFXXXXXX 754
V+ARG+D P V ++Q P D YIH L+ L P E F
Sbjct: 434 VAARGLDIPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSLMFLQPSEVGFLKYLKE 493
Query: 755 XXXXXXXXXXXNPEI---QLQMDNHMAK---IDNNVKEAAYHAWLGYY--NSIREI-GRD 805
+I Q Q++ +++ ++ + K+ Y ++L Y +S+R +
Sbjct: 494 ARVPVVEFDFPAKKIVNVQSQLEKLISQNYYLNKSAKDG-YRSYLQAYASHSLRSVFDVH 552
Query: 806 KTTLVELANKFAQSIGLQRPP 826
K LV K A+S G PP
Sbjct: 553 KLDLV----KVAKSFGFSTPP 569
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 485 (175.8 bits), Expect = 3.0e-44, P = 3.0e-44
Identities = 122/357 (34%), Positives = 197/357 (55%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 216 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 275
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 276 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 329
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 330 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 387
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
LFSAT ++V ++++ LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 388 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 447
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 448 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 503
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 746
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 504 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 560
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 470 (170.5 bits), Expect = 3.8e-44, P = 3.8e-44
Identities = 120/349 (34%), Positives = 192/349 (55%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F+E +S T+KA+ G+ MT VQ T+ L G+D + AKTG+GK++AFL+PAI
Sbjct: 42 EKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 101
Query: 439 EAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTR 495
E + LK + T ++ ++ PTRELA QI A L++ H G++ +GG
Sbjct: 102 ELLHSLKFKPRNGTGII------VITPTRELALQIFGVARELMEFHSQTFGIV--IGGAN 153
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + +L +L+ATPGRLLDH++N G + LK L++DEAD +L++GF ++
Sbjct: 154 RRQEAEKLMKG-VNMLIATPGRLLDHLQNTKGFVFK--NLKALIIDEADRILEIGFEDEM 210
Query: 556 ENIVDCLPRR-RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLV 614
I+ LP RQS+LFSAT +V ++++ L+ +I+ V T ++Q +V
Sbjct: 211 RQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVV 270
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
+ F +L LK + K+IVF S+ LL + + V E++ ++ Q
Sbjct: 271 CDSDKRFLLLFSFLKRN----QKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQ 326
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R EF ++R IL+ +DV+ARG+D P V ++Q P D YIH
Sbjct: 327 KRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIH 375
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 468 (169.8 bits), Expect = 6.3e-44, P = 6.3e-44
Identities = 116/351 (33%), Positives = 189/351 (53%)
Query: 374 PILSQKR-FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
P++ + R F + G++ + +A G+ T++Q + L+G+D + A+TG+GK+ A
Sbjct: 19 PVVEEARSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGA 78
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
F LP ++A+L A ++ L+L PTRELA QI+ E L + G+ +VG
Sbjct: 79 FALPILQALLDAPQR--------LFALVLTPTRELAFQIS-EQFEALGSSIGVHSAVIVG 129
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F
Sbjct: 130 GIDSMSQSLALAKKP-HIIIATPGRLVDHLENTKGFNLR--ALKFLVMDEADRILNMDFE 186
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC 612
+V+ I+ +PR R++ LFSATM K+V+++ + LK + +T K++Q
Sbjct: 187 TEVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNP---VKCAVSSKYQTVEKLQQYY 243
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+ P + L ++L E + G ++FCST T LLLR + ++ +
Sbjct: 244 IFIPSKFKDSYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMS 299
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R +F+A R IL+ +DV++RG+D P V V+ IP + YIH
Sbjct: 300 QNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIH 350
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 467 (169.5 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 118/345 (34%), Positives = 187/345 (54%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 26 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 85
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 86 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 136
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 137 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 193
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ +PR R++ LFSATM K+V+++ + LK + +T K++Q L P +
Sbjct: 194 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNP---VKCAVSSKYQTVEKLQQYYLFIPSK 250
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 251 FKDTYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLG 306
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 307 SLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 351
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 467 (169.5 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 118/345 (34%), Positives = 187/345 (54%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 23 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 82
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 83 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 133
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 134 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 190
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ +PR R++ LFSATM K+V+++ + LK + +T K++Q L P +
Sbjct: 191 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNP---VKCAVSSKYQTVEKLQQYYLFIPSK 247
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 248 FKDTYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLG 303
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 304 SLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 348
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 467 (169.5 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 118/345 (34%), Positives = 187/345 (54%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 84 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 134
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 135 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 191
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ +PR R++ LFSATM K+V+++ + LK + +T K++Q L P +
Sbjct: 192 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNP---VKCAVSSKYQTVEKLQQYYLFIPSK 248
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 249 FKDTYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLG 304
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 305 SLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 349
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 467 (169.5 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 118/345 (34%), Positives = 187/345 (54%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 84 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 134
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 135 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 191
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ +PR R++ LFSATM K+V+++ + LK + +T K++Q L P +
Sbjct: 192 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNP---VKCAVSSKYQTVEKLQQYYLFIPSK 248
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 249 FKDTYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLG 304
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 305 SLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 349
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 466 (169.1 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 118/345 (34%), Positives = 187/345 (54%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 50 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 109
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 110 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQSAVIVGGIDSMS 160
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 161 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 217
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ +PR R++ LFSATM K+V+++ + LK + +T K++Q L P +
Sbjct: 218 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNP---VKCAVSSKYQTVEKLQQYYLFIPSK 274
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 275 FKDTYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLG 330
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 331 SLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 375
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 466 (169.1 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 119/353 (33%), Positives = 191/353 (54%)
Query: 374 PILSQ---KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
PI+ + K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+
Sbjct: 16 PIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKT 75
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
AF LP + A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +
Sbjct: 76 GAFALPILNALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQSAVI 126
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
VGG L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++
Sbjct: 127 VGGIDSMSQSLALAKKP-HIIIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMD 183
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQ 610
F +V+ I+ +PR R++ LFSATM K+V+++ + LK + +T K++Q
Sbjct: 184 FETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNP---VKCAVSSKYQTVEKLQQ 240
Query: 611 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 670
+ P + L ++L E + G ++FCST T LLLR + ++ +
Sbjct: 241 YYIFIPSKFKDTYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQ 296
Query: 671 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R +F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 297 MSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 349
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 483 (175.1 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 136/465 (29%), Positives = 232/465 (49%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + I+ T+K L A ++ +T +Q+ T+ L+G+D + A+TG+GK++AFL+P
Sbjct: 46 SVSQFSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIP 105
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE++++ + T+ + LI+ PTRELA QI E + + ++ + GG
Sbjct: 106 VIESLIR---NKITEY-DGLAALIVSPTRELAVQIF-EVLTKIGKYNTFSAGLVTGGKDV 160
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++
Sbjct: 161 QFEKERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQID 216
Query: 557 NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVE----TPVKIKQSC 612
NI+ LP RQ+LLFSAT + V +++L L T + +G+ S + TP ++Q
Sbjct: 217 NILGHLPTTRQTLLFSATQSESVNDLARLSL----TNPNKIGVSSDQEVSATPESLEQYY 272
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSR 670
+ P + +L +K H+ K++VF S+ Y R ++ +++ ++Y R
Sbjct: 273 VKVPLDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLMKLYGR 328
Query: 671 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXX 730
Q R + +F ++ L +D+ ARG+D+P + VVQV P D Y+H
Sbjct: 329 HKQTSRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSAR 388
Query: 731 XXXXXXXVLLLAPWEEYFXXXXXXXXXXX----XXXXXXNPEIQLQMDNHMAKIDNNVKE 786
+L+L P EE I+ Q+ + K D +K
Sbjct: 389 FGRKGKSLLMLLPSEEEGMLKRLKIHKIEPKLMNIKQKSKKSIRPQLQSLCFK-DPVMKN 447
Query: 787 AAYHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 828
A++ Y+ S+ I +DK + EL A +A S+GL P +
Sbjct: 448 LGQRAFIAYFKSVH-IQKDKDVFKVEELPAESYAASLGLPGAPKI 491
>UNIPROTKB|A4RGU2 [details] [associations]
symbol:DBP4 "ATP-dependent RNA helicase DBP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 OrthoDB:EOG4R53B0
RefSeq:XP_003715000.1 ProteinModelPortal:A4RGU2 STRING:A4RGU2
EnsemblFungi:MGG_08049T0 GeneID:2678339 KEGG:mgr:MGG_08049
Uniprot:A4RGU2
Length = 798
Score = 482 (174.7 bits), Expect = 2.5e-43, P = 2.5e-43
Identities = 122/370 (32%), Positives = 193/370 (52%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E +S T K + + + +T +Q + L+G+D + AKTG+GK++AFL+P +
Sbjct: 49 KAFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLL 108
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + +L L+L PTRELA Q + + + H ++GG +
Sbjct: 109 EKLYREQWTQEAKLG----ALVLSPTRELAVQ-TFQVLRKIGRHHLFSAGLVIGGKSVRE 163
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L IL+ TPGR+L H++ G V L++LVLDEAD ++DLGF++DV+ +
Sbjct: 164 EAEALSR--MNILIGTPGRILQHLDQTHGFDVD--NLQLLVLDEADRIMDLGFQRDVDAL 219
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
V LP RQ+LLFSAT K+V +++L LK + Y+ + TP ++Q +V P
Sbjct: 220 VQHLPTTRQTLLFSATQSKKVSDLARLSLK-DPEYVSVHAEATTATPSTLQQHYIVTPLP 278
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYR 676
L +K ++ K++VF S+G +Y R+M+ + M+ R+ QL R
Sbjct: 279 EKLDTLWGFIKANLKS----KMVVFLSSGKQVRFVYESFRQMQPGIPLLHMHGRQKQLAR 334
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
+++ F +SK L +DV ARG+D+ V VVQV P D + YIH
Sbjct: 335 LDVTKRFDSSKHACLFATDVIARGIDFTGVDWVVQVDAPEDTDDYIHRVGRTARYEREGK 394
Query: 737 XVLLLAPWEE 746
V+ L P EE
Sbjct: 395 AVIFLDPSEE 404
>SGD|S000002602 [details] [associations]
symbol:MSS116 "DEAD-box protein involved splicing of
mitochondrial introns" species:4932 "Saccharomyces cerevisiae"
[GO:0000373 "Group II intron splicing" evidence=IMP;IDA]
[GO:0003723 "RNA binding" evidence=IEA;IDA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA;IMP] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0000372 "Group I intron
splicing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0034337 "RNA folding" evidence=IMP] [GO:0033592
"RNA strand annealing activity" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002602
GO:GO:0005524 GO:GO:0006417 GO:GO:0005759 GO:GO:0006397
EMBL:BK006938 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:Z48784 GO:GO:0000373 GO:GO:0000372
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00700000105515 GO:GO:0033592 OrthoDB:EOG437VPN
PIR:S02116 RefSeq:NP_010480.1 PDB:3I5X PDB:3I5Y PDB:3I61 PDB:3I62
PDB:3SQW PDB:3SQX PDB:4DB2 PDB:4DB4 PDBsum:3I5X PDBsum:3I5Y
PDBsum:3I61 PDBsum:3I62 PDBsum:3SQW PDBsum:3SQX PDBsum:4DB2
PDBsum:4DB4 ProteinModelPortal:P15424 SMR:P15424 DIP:DIP-5368N
IntAct:P15424 MINT:MINT-525340 STRING:P15424 PaxDb:P15424
PeptideAtlas:P15424 EnsemblFungi:YDR194C GeneID:851775
KEGG:sce:YDR194C CYGD:YDR194c HOGENOM:HOG000113654 OMA:PEAHENI
EvolutionaryTrace:P15424 NextBio:969573 Genevestigator:P15424
GermOnline:YDR194C GO:GO:0034337 Uniprot:P15424
Length = 664
Score = 465 (168.7 bits), Expect = 6.5e-43, Sum P(2) = 6.5e-43
Identities = 139/474 (29%), Positives = 234/474 (49%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ T +
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLIN-TKFDS 177
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+V + I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 178 QYMVKAV---IVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 234
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 235 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 292
Query: 567 -------QSLLFSATMPKEVRRISQLVL-KREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
++LLFSAT+ +V++++ ++ K+E ++DTV E +I QS +++
Sbjct: 293 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 352
Query: 619 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMKMN--VREMYSRKPQ 673
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 353 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 412
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXX 733
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIH
Sbjct: 413 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 472
Query: 734 XXXXVLLLAPWE-EYFXXXXXXXXXXXXXXXXXNP--EIQLQMDNHMAKIDNNVKEAAYH 790
VL + E + P EI+ ++ + + ++ +
Sbjct: 473 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 532
Query: 791 AWLGYYNSIREIG-RDKTTLVELANKFAQSIG-LQRPPPLFRKTALKMGLKDIP 842
Y + I+E ++ L E+A+ + + Q P+ R+ K+GL P
Sbjct: 533 LISSYRSCIKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRRFLDKLGLSRSP 586
Score = 44 (20.5 bits), Expect = 6.5e-43, Sum P(2) = 6.5e-43
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 218 RRAYFSGT-DKRNFCRNDGSSTRDK 241
RR Y G D+RNF RN ++ ++
Sbjct: 35 RRLYNDGNRDQRNFGRNQRNNNSNR 59
Score = 38 (18.4 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 244 FDTGNKAKPFARNLGNNRENGDS 266
++ GN+ + RN G N+ N +S
Sbjct: 38 YNDGNRDQ---RNFGRNQRNNNS 57
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 456 (165.6 bits), Expect = 1.4e-42, P = 1.4e-42
Identities = 158/554 (28%), Positives = 259/554 (46%)
Query: 312 DVKKMGSSASLGK----YDMKITKRVPLKSLEDEHDFEEQVELIRKEISXXXXXXXXXXX 367
DVKK L + ++ K K V ++ +E D EE+VE +K +
Sbjct: 4 DVKKKVLKRKLKQMKDGHEKKKAKEVVVEEPMEEED-EEEVEEEQKHQTEESSETKVSEF 62
Query: 368 XXXXXXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
L K ++ +KA+ G+ MT +Q ++ LEGKD + AKTG+
Sbjct: 63 LTKTTFASLEGK------VNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGS 116
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
GK++AFLLPAIE + K V+I+ PTREL+ Q LL+ + +
Sbjct: 117 GKTLAFLLPAIELLHKLNWKQHNGTG----VIIVSPTRELSMQTYGVLSELLEGSN-LTY 171
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
++GG+ ++ +L ILVATPGRLLDH++N VR M K L++DEAD +L
Sbjct: 172 GLVMGGSNRSAEKDKLAKG-VSILVATPGRLLDHLQNTDNFLVRNM--KCLIIDEADRIL 228
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK 607
D+GF +++ ++ LP++RQS+LFSAT +V + +L L + T
Sbjct: 229 DIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEEATVEG 288
Query: 608 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM 667
++Q +VAP + +L LK++ KV+VF S+ + LL + + +
Sbjct: 289 LQQGYIVAPSDKRLLLLFTFLKKN----KTKKVMVFFSSCNSVKFHHELLNYIDIPCMSI 344
Query: 668 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXX 727
+ ++ Q R +F ++ IL+ +DV+ARG+D P V +VQ + +YIH
Sbjct: 345 HGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGR 404
Query: 728 XXXXXXXXXXVLLLAPWEEY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---I 780
LL+ EE + IQ Q++N ++K +
Sbjct: 405 TARGTNGSGKALLVLRPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYL 464
Query: 781 DNNVKEAAYHAWLGYYNS--IREIGRDKTTLVELANKFAQSIGLQRPP----PLFRKTAL 834
+ + KEA Y +L Y+S +++I D T + +L ++S G PP P+ K +
Sbjct: 465 NKSAKEA-YKCYLRAYDSHSLKDIF-DVTNM-DLT-AVSKSFGFSVPPFVDLPISNKPKV 520
Query: 835 KMGLKDIPGIRLRK 848
++ K + G RK
Sbjct: 521 EIRSK-LSGAGYRK 533
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 455 (165.2 bits), Expect = 1.8e-42, P = 1.8e-42
Identities = 118/348 (33%), Positives = 185/348 (53%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+++ F + G++ +KA+T +GY T +Q + L G D A+TGTGK+ AF+L
Sbjct: 1 MTETTFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P I+ + +T + ++ P LILCPTRELA+Q+A E + + + L+GG
Sbjct: 61 PMIQRL--STGRARARM-PRC--LILCPTRELAAQVA-ENFEKYGKYLKLTMALLIGGVS 114
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
FK +Q L +L+ATPGRL+D + L +MG++ L++DEAD +LD+GF D+
Sbjct: 115 FK-EQETLLQRGVDVLIATPGRLMDQFDRGKLL---MMGVETLIIDEADRMLDMGFIPDI 170
Query: 556 ENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
E I LP RQ+LLFSAT P +++R+++ +++ I+ +T I Q +
Sbjct: 171 EKICAKLPANRQTLLFSATFPTDIQRLAK-TFQKDPKKIEVTR--PAQTAETISQFVVKL 227
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
P + L+ I T IVFC+ + ++ L + + ++ PQ
Sbjct: 228 PTN-DGKARRTALRRVIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSV 286
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R + FR K +LV SDV+ARG+D PDV V G PP E Y+H
Sbjct: 287 RSETLQRFRDGKLKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVH 334
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 462 (167.7 bits), Expect = 1.8e-42, P = 1.8e-42
Identities = 150/471 (31%), Positives = 230/471 (48%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I++ K F+ +S T K++ G+ +MT++Q + + G+D + A+TG+GK++AFL
Sbjct: 150 IMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFL 209
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+PA+E + +K T + T VL++CPTRELA Q A LLK H V ++G
Sbjct: 210 IPAVELLYRVKFTPRNGTG------VLVICPTRELAIQSYGVAKELLKYHSQT-VGKVIG 262
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + K + L +LVATPGRLLDH+EN +G + LK LV+DEAD +L+ F
Sbjct: 263 GEKRKTEAEILAKG-VNLLVATPGRLLDHLENTNGFIFK--NLKFLVMDEADRILEQNFE 319
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVE-TPVKIKQS 611
+D++ I++ LP+ RQ+ LFSAT +V ++++ L YID V G E T ++Q
Sbjct: 320 EDLKKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSP-VYID-VDEGRKEVTNEGLEQG 377
Query: 612 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 671
V P + L LK G K++VF ST T L R +K + E+
Sbjct: 378 YCVVPSAMRLLFLLTFLKR-FQGKK--KIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGI 434
Query: 672 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXX 731
Q R +F ++ IL+ ++V+ARG+D+P V +VQ P + YIH
Sbjct: 435 DQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARG 494
Query: 732 XXXXXXVLL-LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK-IDNN--VKEA 787
LL L P E F ++ L + + I N +KE+
Sbjct: 495 EGAKGKALLVLTPQELKFIQYLKAAKIPVEEHEFEEKKL-LDVKPFVENLISENYALKES 553
Query: 788 AYHAWLGYYNSIREIG-RDKTTLVEL-ANKFAQSIGLQRPPPLFRKTALKM 836
A A+ Y + +D + +L + A S G PP K ALK+
Sbjct: 554 AKEAYKTYISGYDSHSMKDVFNVHQLNLTEVATSFGFSDPP----KVALKI 600
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 437 (158.9 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 109/343 (31%), Positives = 185/343 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF +P +++
Sbjct: 81 FKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQS 140
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++ L+L PTRELA QIA E L + G+ +VGG
Sbjct: 141 LLACAQR--------LHTLVLTPTRELAFQIA-EQFDALGSSIGVKTAVIVGGIDMMSQA 191
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P +++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I+
Sbjct: 192 LVLAKKP-HVVIATPGRLIDHMENTKGFNLR--ALKYLVMDEADRILNMDFESEVDKILK 248
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+PR R++ LFSATM K+V+++ + L+ + +V+ K++Q + P +
Sbjct: 249 VIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVD---KLQQFYIFIPSKYK 305
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
L +L E + G +VFC T T + LLLR + + ++ + Q R
Sbjct: 306 DCYLVSILNE-LAGN---SFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGAL 361
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++ R +L+ +DV++RG+D P V V+ IP + YIH
Sbjct: 362 NKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIH 404
Score = 37 (18.1 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 76 TKLFDKADPDSETNQHKPMSPDE 98
T AD + ETN H P +E
Sbjct: 35 TNTHTPADTE-ETNTHTPADTEE 56
Score = 37 (18.1 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 76 TKLFDKADPDSETNQHKPMSPDE 98
T AD + ETN H P +E
Sbjct: 24 TNTHTPADTE-ETNTHTPADTEE 45
Score = 37 (18.1 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 76 TKLFDKADPDSETNQHKPMSPDE 98
T AD + ETN H P +E
Sbjct: 13 TNTHTPADTE-ETNTHTPADTEE 34
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 448 (162.8 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 122/346 (35%), Positives = 179/346 (51%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GI +A GY T +Q + LEG+D + A+TG+GK+ AF LP +
Sbjct: 46 KSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPML 105
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+A+++A + ++ L+L PTRELA QI+ +A L + G+ +VGG
Sbjct: 106 QALMEAPQT--------LFGLVLAPTRELAYQIS-QAFETLGSTIGVRCAVIVGGMDMVA 156
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I+VATPGRLLDH+EN G S+R LK L +DEAD LLD+ F + ++ I
Sbjct: 157 QSIALGKKP-HIIVATPGRLLDHLENTKGFSLR--NLKYLAIDEADRLLDMDFGESLDKI 213
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGS-VETPVKIKQSCLVAPH 617
+ LPR R + LFSATM +V + + L V + S +T ++ S + PH
Sbjct: 214 IRILPRTRHTYLFSATMSTKVESLQRASLSNPVR----VSVSSKYQTVSTLQSSYICIPH 269
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ L +LL E G I+F +T T + +LR + ++ + Q R
Sbjct: 270 KHKNLYLVYLLNE-FAGQ---SAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARL 325
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+FR+ R ILV +DV+ARG+D P V V +P D + YIH
Sbjct: 326 GALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIH 371
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 452 (164.2 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 118/342 (34%), Positives = 185/342 (54%)
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVL 442
E GISP +KAL++ G ++ +Q+A L +EG+D + +A+TGTGK++AF +P I+ ++
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
K + P L+L PTRELA Q+ E ++ + + L GGT R+
Sbjct: 168 KYNAKHGRGRNP--LCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRQ 222
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L+ + V TPGR++D + K G ++ L ++ +VLDEAD +L +GF +DVE I++ L
Sbjct: 223 LDYG-VDVAVGTPGRVIDLM--KRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 278
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 622
P +RQS++FSATMP +R +++ L T +D VG + I ++A
Sbjct: 279 PEKRQSMMFSATMPSWIRSLTKKYLNNPLT-VDLVGDSDQKLADGITTYSIIADSYGRAS 337
Query: 623 ILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 681
I+ L+ EH G K IVF T L Y L R K ++ Q R+R
Sbjct: 338 IIGPLVTEHAKGG---KCIVFTQTKRDADRLSYALARSFKCEA--LHGDISQSQRERTLA 392
Query: 682 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
FR ILV +DV+ARG+D P+V ++ +P + E ++H
Sbjct: 393 GFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVH 434
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 446 (162.1 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 118/369 (31%), Positives = 195/369 (52%)
Query: 381 FDECGI-SPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F E GI +PL + LT GY+ T VQ AT+ A L G+D + A TG+GK+ AF LP ++
Sbjct: 11 FAELGIIAPLGNR-LTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKV 498
+ +A S+ + V + L+L PTRELA Q+A ++ + +G + ++ GG +
Sbjct: 70 RLSEAKSADKSAGV--VRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L + +LVATPGRLLD + + + ++L + VLDEAD +L LGF +++E +
Sbjct: 128 QMQSLRAG-ADVLVATPGRLLDLLASNA---LKLTQVSAFVLDEADRMLSLGFTEELEQV 183
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ LPR++Q+LLFSAT P+EVR ++ +L + Y L S E I+Q + E
Sbjct: 184 LAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEY----HLQS-EQESTIEQRVITVNRE 238
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+L HL+K+H + ++F S + L L + ++ + K Q R R
Sbjct: 239 QKTALLAHLIKQHQWS----QALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTR 294
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 738
+ + F+ + +L+ +D++ARG+D + V+ +P Y+H V
Sbjct: 295 VLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAV 354
Query: 739 LLLAPWEEY 747
L++ EEY
Sbjct: 355 TLISH-EEY 362
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 446 (162.1 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 118/369 (31%), Positives = 195/369 (52%)
Query: 381 FDECGI-SPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F E GI +PL + LT GY+ T VQ AT+ A L G+D + A TG+GK+ AF LP ++
Sbjct: 11 FAELGIIAPLGNR-LTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKV 498
+ +A S+ + V + L+L PTRELA Q+A ++ + +G + ++ GG +
Sbjct: 70 RLSEAKSADKSAGV--VRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L + +LVATPGRLLD + + + ++L + VLDEAD +L LGF +++E +
Sbjct: 128 QMQSLRAG-ADVLVATPGRLLDLLASNA---LKLTQVSAFVLDEADRMLSLGFTEELEQV 183
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ LPR++Q+LLFSAT P+EVR ++ +L + Y L S E I+Q + E
Sbjct: 184 LAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEY----HLQS-EQESTIEQRVITVNRE 238
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+L HL+K+H + ++F S + L L + ++ + K Q R R
Sbjct: 239 QKTALLAHLIKQHQWS----QALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTR 294
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 738
+ + F+ + +L+ +D++ARG+D + V+ +P Y+H V
Sbjct: 295 VLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAV 354
Query: 739 LLLAPWEEY 747
L++ EEY
Sbjct: 355 TLISH-EEY 362
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 445 (161.7 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 124/374 (33%), Positives = 190/374 (50%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+S+K F +S +ALT GY T VQ + L+ KD VVK++TG+GK+ +F +
Sbjct: 1 MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P E V + Q L+L PTRELA Q+ E I + I + G +
Sbjct: 61 PLCEMV--EWEENKPQ------ALVLTPTRELAVQVK-EDITNIGRFKRIKAAAIYGKSP 111
Query: 496 FKVDQRRLE-SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F +++LE I+V TPGR+LDHIE K LS L LK LV+DEAD +L++GF
Sbjct: 112 FA--RQKLELKQKTHIVVGTPGRVLDHIE-KGTLS--LERLKYLVIDEADEMLNMGFIDQ 166
Query: 555 VENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLV 614
VE I+D LP +R ++LFSAT+P++V R+S+ + T+I+ G T KI+ +
Sbjct: 167 VEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAP-THIEIKAAGI--TTDKIEHTLFE 223
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
E +L + + PD I+FC T +Y L + +++ Q
Sbjct: 224 VREEEKLSLLKDVTT---IENPD-SCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQE 279
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R + ++FR K LV +DV+ARG+D ++T V+ IP ++E Y+H
Sbjct: 280 DRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNS 339
Query: 735 XXXVLLLAPWEEYF 748
+ + P+E+ F
Sbjct: 340 GKAITFITPYEDRF 353
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 445 (161.7 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 124/374 (33%), Positives = 190/374 (50%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+S+K F +S +ALT GY T VQ + L+ KD VVK++TG+GK+ +F +
Sbjct: 1 MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P E V + Q L+L PTRELA Q+ E I + I + G +
Sbjct: 61 PLCEMV--EWEENKPQ------ALVLTPTRELAVQVK-EDITNIGRFKRIKAAAIYGKSP 111
Query: 496 FKVDQRRLE-SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F +++LE I+V TPGR+LDHIE K LS L LK LV+DEAD +L++GF
Sbjct: 112 FA--RQKLELKQKTHIVVGTPGRVLDHIE-KGTLS--LERLKYLVIDEADEMLNMGFIDQ 166
Query: 555 VENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLV 614
VE I+D LP +R ++LFSAT+P++V R+S+ + T+I+ G T KI+ +
Sbjct: 167 VEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAP-THIEIKAAGI--TTDKIEHTLFE 223
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
E +L + + PD I+FC T +Y L + +++ Q
Sbjct: 224 VREEEKLSLLKDVTT---IENPD-SCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQE 279
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R + ++FR K LV +DV+ARG+D ++T V+ IP ++E Y+H
Sbjct: 280 DRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNS 339
Query: 735 XXXVLLLAPWEEYF 748
+ + P+E+ F
Sbjct: 340 GKAITFITPYEDRF 353
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 444 (161.4 bits), Expect = 2.9e-41, P = 2.9e-41
Identities = 121/371 (32%), Positives = 180/371 (48%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E ++P +KA+ AGY T +Q + LEG+D + A+TGTGK+ +F LP I
Sbjct: 3 KFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMIT 62
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + + + +P L+LCPTRELA+Q+A E H + L+GG FK +
Sbjct: 63 LLARGRARAR---MPRS--LVLCPTRELAAQVA-ENFDTYTKHLKLTKALLIGGVSFK-E 115
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q L +L+ATPGRLLDH E L L G++++V+DEAD +LD+GF D+E I
Sbjct: 116 QDALIDRGVDVLIATPGRLLDHFERGKLL---LTGVQIMVVDEADRMLDMGFIPDIERIF 172
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLK---REHTYIDTVGLGSVETPVKI-KQSCLVA 615
P RQ+L FSATM E+ RI+ L R ++E V + K S
Sbjct: 173 SLTPFTRQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDR 232
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
+L L+ G I+FC+ ++ L++ + ++ Q
Sbjct: 233 EASEKRAVLRALIDAE--GEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQ 290
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
R R + FR K +LV SDV+ARG+D P V+ V +P E Y+H
Sbjct: 291 RTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDG 350
Query: 736 XXVLLLAPWEE 746
+ L P +E
Sbjct: 351 KAITLCIPRDE 361
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 440 (159.9 bits), Expect = 7.9e-41, P = 7.9e-41
Identities = 113/363 (31%), Positives = 190/363 (52%)
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVL 442
+ G++ +A + +++Q + L+GKD + A+TG+GK+ AF LP + A+L
Sbjct: 65 DLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALL 124
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ + L+L PTRELA QI E L + GI +VGG +
Sbjct: 125 ENPQR--------YFALVLTPTRELAFQIG-EQFEALGSGIGIKCCVVVGGMDMVAQGLQ 175
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L P I++ATPGRL+DH+EN G +++ +K LV+DEAD +L++ F +++ I+ L
Sbjct: 176 LAKKP-HIIIATPGRLVDHLENMKGFNLK--AIKYLVMDEADRILNMDFEVELDKILKVL 232
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 622
PR R++ LFSATM K+V+++ + LK + ++ +T +++QS L P +
Sbjct: 233 PRERRTFLFSATMTKKVKKLQRASLK-DPVKVEVSN--KYQTVEQLQQSYLFIPVKYKDV 289
Query: 623 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 682
L H+L E + G ++FCST T L+LR + + ++ + Q R +
Sbjct: 290 YLVHILNE-LAGN---SFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNK 345
Query: 683 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLA 742
F+A R IL+++DV++RG+D P V VV IP + YIH + L++
Sbjct: 346 FKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVS 405
Query: 743 PWE 745
++
Sbjct: 406 QYD 408
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 440 (159.9 bits), Expect = 7.9e-41, P = 7.9e-41
Identities = 118/373 (31%), Positives = 193/373 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + +++L G T +QE L L GKD + +KTG+GK++AFLLPA++
Sbjct: 2 QFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V+ + S P VLIL PTRELA Q+ ++ L+ N ++++GG F
Sbjct: 62 RVISTRALSKRD--PR--VLILLPTRELAHQVYSQLRLLVANTQ-YKAISVLGGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L +P +VATPGR+ DH+E K+ + L GL++L+LDEAD +LDLGF ++ I
Sbjct: 117 AKALAKEP-HFIVATPGRIADHLEQKN---LFLNGLELLILDEADRMLDLGFAPQLKAIN 172
Query: 560 DCLP-RRRQSLLFSATMP-KEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
+ +RRQ+L+FSAT+ E+ I+ +LK ++ +G E I Q + H
Sbjct: 173 EAADHKRRQTLMFSATLDHSEINEIAAALLKNP-LHV-AIGTAHAEHQ-DISQRIYLCDH 229
Query: 618 ELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
H + L +L +K VI+F +T T L L + Q R
Sbjct: 230 LDHKEAL----LSRLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAAR 285
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
++I ++F ++ ILVT+DV++RG+D +V+ V+ +P E+Y+H
Sbjct: 286 NQIMDQFARGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGD 345
Query: 737 XVLLLAP--WEEY 747
+ L+ P W+ +
Sbjct: 346 AISLVGPKDWDSF 358
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 440 (159.9 bits), Expect = 7.9e-41, P = 7.9e-41
Identities = 124/375 (33%), Positives = 189/375 (50%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + G+ +K L + Q T +Q+ + + G+D + +KTG+GK++AF+LP
Sbjct: 3 STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLP 62
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ LK + S P LIL PTRELA Q+ E ++L L + GG F
Sbjct: 63 MLHKSLKTKAFSAKD--PR--GLILVPTRELAKQVYGELRSMLGGLSYTATL-ITGGENF 117
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ L P + +VATPGRL DH++++S + L GL+ LVLDEAD +LDLGF K++
Sbjct: 118 NDQVKALARGP-RFIVATPGRLADHLDHRS---LFLEGLETLVLDEADRMLDLGFAKELR 173
Query: 557 NIVDCLP-RRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
I + RRRQ+L+FSAT+ + L E I +G+GS E I Q +
Sbjct: 174 RIHNAAKHRRRQTLMFSATLDHADVNDMAMELLNEPKRI-AIGVGSEEHK-DITQHFYLC 231
Query: 616 PHELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
H H + L + IL +Y+ VI+F +T T L L + + + Q
Sbjct: 232 DHLDHKEAL----LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQT 287
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R+ I +F + ILVT+DV++RG+D P VT V+ +P E+Y+H
Sbjct: 288 QRNTIMGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNK 347
Query: 735 XXXVLLLAP--WEEY 747
+ L+ P WE +
Sbjct: 348 GDAMSLVGPKDWESF 362
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 440 (159.9 bits), Expect = 7.9e-41, P = 7.9e-41
Identities = 118/373 (31%), Positives = 193/373 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + +++L G T +QE L L GKD + +KTG+GK++AFLLPA++
Sbjct: 2 QFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V+ + S P VLIL PTRELA Q+ ++ L+ N ++++GG F
Sbjct: 62 RVISTRALSKRD--PR--VLILLPTRELAHQVYSQLRLLVANTQ-YKAISVLGGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L +P +VATPGR+ DH+E K+ + L GL++L+LDEAD +LDLGF ++ I
Sbjct: 117 AKALAKEP-HFIVATPGRIADHLEQKN---LFLNGLELLILDEADRMLDLGFAPQLKAIN 172
Query: 560 DCLP-RRRQSLLFSATMP-KEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
+ +RRQ+L+FSAT+ E+ I+ +LK ++ +G E I Q + H
Sbjct: 173 EAADHKRRQTLMFSATLDHSEINEIAAALLKNP-LHV-AIGTAHAEHQ-DISQRIYLCDH 229
Query: 618 ELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
H + L +L +K VI+F +T T L L + Q R
Sbjct: 230 LDHKEAL----LSRLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAAR 285
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
++I ++F ++ ILVT+DV++RG+D +V+ V+ +P E+Y+H
Sbjct: 286 NQIMDQFARGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGD 345
Query: 737 XVLLLAP--WEEY 747
+ L+ P W+ +
Sbjct: 346 AISLVGPKDWDSF 358
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 440 (159.9 bits), Expect = 7.9e-41, P = 7.9e-41
Identities = 124/375 (33%), Positives = 189/375 (50%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + G+ +K L + Q T +Q+ + + G+D + +KTG+GK++AF+LP
Sbjct: 3 STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLP 62
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ LK + S P LIL PTRELA Q+ E ++L L + GG F
Sbjct: 63 MLHKSLKTKAFSAKD--PR--GLILVPTRELAKQVYGELRSMLGGLSYTATL-ITGGENF 117
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ L P + +VATPGRL DH++++S + L GL+ LVLDEAD +LDLGF K++
Sbjct: 118 NDQVKALARGP-RFIVATPGRLADHLDHRS---LFLEGLETLVLDEADRMLDLGFAKELR 173
Query: 557 NIVDCLP-RRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
I + RRRQ+L+FSAT+ + L E I +G+GS E I Q +
Sbjct: 174 RIHNAAKHRRRQTLMFSATLDHADVNDMAMELLNEPKRI-AIGVGSEEHK-DITQHFYLC 231
Query: 616 PHELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
H H + L + IL +Y+ VI+F +T T L L + + + Q
Sbjct: 232 DHLDHKEAL----LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQT 287
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R+ I +F + ILVT+DV++RG+D P VT V+ +P E+Y+H
Sbjct: 288 QRNTIMGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNK 347
Query: 735 XXXVLLLAP--WEEY 747
+ L+ P WE +
Sbjct: 348 GDAMSLVGPKDWESF 362
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 439 (159.6 bits), Expect = 1.0e-40, P = 1.0e-40
Identities = 128/339 (37%), Positives = 182/339 (53%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
I + GY Q T +Q+ + A + G D + A+TGTGK+ AF LP I K +
Sbjct: 14 IDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIIN---KFGRNKID 70
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV--GGT--RFKVDQRRLESD 506
LIL PTRELASQI + DG+G+ T V GG + +VD L D
Sbjct: 71 IKAKSTRSLILTPTRELASQIMQN---IDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLD 127
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
ILVATPGRLLD IE +G + L++ VLDEAD +LD+GF KDV++I+ LP+ R
Sbjct: 128 ---ILVATPGRLLDLIE--TG-DINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSR 181
Query: 567 QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 626
Q+LLFSATMP E+ +++ +L + T I + ET V I LV H +
Sbjct: 182 QTLLFSATMPAEIEILAEAILT-DPTKIQI----TAET-VTID---LVNQSVYHLDKSNK 232
Query: 627 L-LKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 684
+ L +IL DY KV++FC T ++ L + + ++S K Q R+ + F+
Sbjct: 233 VPLLFNILTKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFK 292
Query: 685 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
S +LV +DV+ARG+D ++T V+ +P D YIH
Sbjct: 293 DSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIH 331
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 133/438 (30%), Positives = 205/438 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P Q+LLFSATMP +RRI++ + E +I V V P I+Q L +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMT-EPQHIK-VKAKEVTMP-NIQQFYLEVQEKKK 227
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F +L LL + +P+ IVF T L L ++ Q R +
Sbjct: 228 FDVLTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVL 283
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+F+ +LV +DV+ARG+D VT V IP D E Y+H +L
Sbjct: 284 RKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLF 343
Query: 741 LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 800
+ P E P + ++ I ++ + L YY I
Sbjct: 344 VTP-RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIA 402
Query: 801 EI---GRDKTTLVELANK 815
E D T+V A K
Sbjct: 403 EEMLEENDSVTVVAAALK 420
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 133/438 (30%), Positives = 205/438 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P Q+LLFSATMP +RRI++ + E +I V V P I+Q L +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMT-EPQHIK-VKAKEVTMP-NIQQFYLEVQEKKK 227
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F +L LL + +P+ IVF T L L ++ Q R +
Sbjct: 228 FDVLTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVL 283
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+F+ +LV +DV+ARG+D VT V IP D E Y+H +L
Sbjct: 284 RKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLF 343
Query: 741 LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 800
+ P E P + ++ I ++ + L YY I
Sbjct: 344 VTP-RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIA 402
Query: 801 EI---GRDKTTLVELANK 815
E D T+V A K
Sbjct: 403 EEMLEENDSVTVVAAALK 420
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 133/438 (30%), Positives = 205/438 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P Q+LLFSATMP +RRI++ + E +I V V P I+Q L +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMT-EPQHIK-VKAKEVTMP-NIQQFYLEVQEKKK 227
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F +L LL + +P+ IVF T L L ++ Q R +
Sbjct: 228 FDVLTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVL 283
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+F+ +LV +DV+ARG+D VT V IP D E Y+H +L
Sbjct: 284 RKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLF 343
Query: 741 LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 800
+ P E P + ++ I ++ + L YY I
Sbjct: 344 VTP-RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIA 402
Query: 801 EI---GRDKTTLVELANK 815
E D T+V A K
Sbjct: 403 EEMLEENDSVTVVAAALK 420
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 133/438 (30%), Positives = 205/438 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P Q+LLFSATMP +RRI++ + E +I V V P I+Q L +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMT-EPQHIK-VKAKEVTMP-NIQQFYLEVQEKKK 227
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F +L LL + +P+ IVF T L L ++ Q R +
Sbjct: 228 FDVLTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVL 283
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+F+ +LV +DV+ARG+D VT V IP D E Y+H +L
Sbjct: 284 RKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLF 343
Query: 741 LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 800
+ P E P + ++ I ++ + L YY I
Sbjct: 344 VTP-RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQNTIENENLAYYKRIA 402
Query: 801 EI---GRDKTTLVELANK 815
E D T+V A K
Sbjct: 403 EEMLEENDSVTVVAAALK 420
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 133/438 (30%), Positives = 205/438 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P Q+LLFSATMP +RRI++ + E +I V V P I+Q L +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMT-EPQHIK-VKAKEVTMP-NIQQFYLEVQEKKK 227
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F +L LL + +P+ IVF T L L ++ Q R +
Sbjct: 228 FDVLTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVL 283
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+F+ +LV +DV+ARG+D VT V IP D E Y+H +L
Sbjct: 284 RKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLF 343
Query: 741 LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 800
+ P E P + ++ I ++ + L YY I
Sbjct: 344 VTP-RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIA 402
Query: 801 EI---GRDKTTLVELANK 815
E D T+V A K
Sbjct: 403 EEMLEENDSVTVVAAALK 420
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 133/438 (30%), Positives = 205/438 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P Q+LLFSATMP +RRI++ + E +I V V P I+Q L +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMT-EPQHIK-VKAKEVTMP-NIQQFYLEVQEKKK 227
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F +L LL + +P+ IVF T L L ++ Q R +
Sbjct: 228 FDVLTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVL 283
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+F+ +LV +DV+ARG+D VT V IP D E Y+H +L
Sbjct: 284 RKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLF 343
Query: 741 LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 800
+ P E P + ++ I ++ + L YY I
Sbjct: 344 VTP-RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIA 402
Query: 801 EI---GRDKTTLVELANK 815
E D T+V A K
Sbjct: 403 EEMLEENDSVTVVAAALK 420
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 133/438 (30%), Positives = 205/438 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P Q+LLFSATMP +RRI++ + E +I V V P I+Q L +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMT-EPQHIK-VKAKEVTMP-NIQQFYLEVQEKKK 227
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F +L LL + +P+ IVF T L L ++ Q R +
Sbjct: 228 FDVLTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVL 283
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+F+ +LV +DV+ARG+D VT V IP D E Y+H +L
Sbjct: 284 RKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLF 343
Query: 741 LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 800
+ P E P + ++ I ++ + L YY I
Sbjct: 344 VTP-RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIA 402
Query: 801 EI---GRDKTTLVELANK 815
E D T+V A K
Sbjct: 403 EEMLEENDSVTVVAAALK 420
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 121/345 (35%), Positives = 186/345 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E ++P +KA+ A GY + T VQ A + LE D + A+TGTGK+ AF+LPA++
Sbjct: 3 FAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
L + + P VL+L PTRELA Q+ +A+ + ++GG + Q
Sbjct: 63 -LSSPPQGPGR--GP-RVLVLTPTRELAQQVT-DAVRTYGAFMRVRSGAILGGMPYHA-Q 116
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL S P +VATPGRL+D ++ +S + L L++LVLDEAD +LD+GF DV+ I
Sbjct: 117 LRLLSAPVDFIVATPGRLVDLLDRRS---LDLSRLELLVLDEADRMLDMGFSDDVDRIAA 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
P RQ+LLF+ATM + R++ +L RE ID G + T I+Q VA +LH
Sbjct: 174 ASPATRQTLLFTATMDSAMARLAGRLL-REPERIDIAGTKT--THEHIEQRLHVAD-DLH 229
Query: 621 FQ--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+ +L HL+ + L + I+F +T L L L+ + ++ PQ R+R
Sbjct: 230 HKNRLLRHLITDESLR----RAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNR 285
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ + +LV +DV+ARG+D ++ V+ +P E Y+H
Sbjct: 286 TIAAMKQGRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVH 330
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 437 (158.9 bits), Expect = 1.7e-40, P = 1.7e-40
Identities = 114/346 (32%), Positives = 192/346 (55%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF+ P ++A++ GY +MT +Q+ + A G+D + A+TGTGK+ AF LP ++
Sbjct: 2 RFESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+++ S + L VLIL PTRELA+Q+A E + + VLT+ GG + +
Sbjct: 62 KMVENPSET---LKSNTRVLILTPTRELAAQVA-ENVEAYSKYLNFSVLTIYGGVKVETQ 117
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++L+ I+VATPGRLL+H+ + ++ L + LVLDEAD +LD+GF D++ I+
Sbjct: 118 AQKLKRG-ADIIVATPGRLLEHL---TACNLSLSSVDFLVLDEADRMLDMGFSADIQKIL 173
Query: 560 DCLPRRRQSLLFSATMPKEVRRIS-QLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ ++RQ+LLFSAT V++++ ++++K + D + +T + Q +V P E
Sbjct: 174 QAVNKKRQNLLFSATFSSAVKKLANEMMIKPQVISADKQNT-TADT---VSQ--VVYPVE 227
Query: 619 LHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ LL E ++G +++ V+VF +T L L + ++ K Q R
Sbjct: 228 QRRK--RELLSE-LIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRR 284
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R EF + K +LV ++V+ARG+D P + VV +P E Y+H
Sbjct: 285 RALREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVH 330
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 456 (165.6 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 126/384 (32%), Positives = 201/384 (52%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K+F + +S T KAL + ++ T+VQ ++ L+GKD + A TG+GK++AFL+P +
Sbjct: 72 KKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVL 131
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S T + +I+ PTRELA QI + K+HD L ++GG K
Sbjct: 132 EHLFMNKWSRTDG----VGAIIISPTRELAYQIFETLKKVGKHHDFSAGL-IIGGKNLKF 186
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ R+ D C IL+ TPGRLL H++ + M +MLVLDEAD LD+GF+K + +I
Sbjct: 187 ERTRM--DQCNILICTPGRLLQHMDENPLFNTSTM--EMLVLDEADRCLDMGFQKTLNSI 242
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPV----KIKQSCLV 614
++ P RQ+LLFSAT V+ +++L LK + Y+ G E P K + ++
Sbjct: 243 IENFPPVRQTLLFSATQTNTVQDLARLNLK-DPVYVGYGGATPREEPSASTKKTPNTAVL 301
Query: 615 APHEL---HFQILH-----HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--V 664
A EL + +L+ +L I K+IVF ++ LY + +++ +
Sbjct: 302 AVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPL 361
Query: 665 REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHX 724
+Y Q R I E+F +++ ++DV++RG+D+P V VVQ+ P D QYIH
Sbjct: 362 LALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHR 421
Query: 725 XXXXXXXXXXXXXVLLLAPWEEYF 748
+L+L P EE +
Sbjct: 422 AGRSARNKTRGECLLVLTPSEEEY 445
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 434 (157.8 bits), Expect = 3.6e-40, P = 3.6e-40
Identities = 123/360 (34%), Positives = 179/360 (49%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L GY+ MT VQ A L A L GKD V+AKTG+GK+ AF L ++ +
Sbjct: 10 LPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQI--DA 67
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
S TQ L+LCPTRELA Q+A E L + +LTL GG F + + L+
Sbjct: 68 SLFQTQ------ALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQH 121
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
P I+VATPGRLLDH++ G +V L L LV+DEAD +LD+GF +++++ P
Sbjct: 122 AP-HIIVATPGRLLDHLQK--G-TVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPAS 177
Query: 566 RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 625
RQ+LLFSAT P+ + IS V +R+ I+ + S + I+Q + +L
Sbjct: 178 RQTLLFSATWPEAIAAISGRV-QRDPLAIE---IDSTDALPPIEQQFYETSSKGKIPLLQ 233
Query: 626 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 685
LL H P +VFC+T + L E+ + ++ Q RD+ F
Sbjct: 234 RLLSLH---QPS-SCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFAN 289
Query: 686 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 745
+LV +DV+ARG+D + VV + D E ++H + AP E
Sbjct: 290 GSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEE 349
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 434 (157.8 bits), Expect = 3.6e-40, P = 3.6e-40
Identities = 106/343 (30%), Positives = 180/343 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+S + ++ + GY + T +Q + L+G+D + A+TGTGK+ +F+LP +E
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + TQ + LIL PTRELA Q+A E + G+ L + GG + +
Sbjct: 63 LRQGQ----TQRKKRVRALILVPTRELAMQVA-EKVEQYGKDTGLKSLAVFGGVDEQAQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL D +LVATPGRL+D ++ V ++M+VLDEAD +LD+GF + + I+D
Sbjct: 118 QRL-IDGVDVLVATPGRLMDLYGQRA---VYFEEIEMVVLDEADRMLDMGFIESINKIID 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
CLP Q LLFSAT+ ++VR +++ ++ H S I Q + +
Sbjct: 174 CLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSN---ISQWLITVDKDTK 230
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
+L HL+ E + ++F T + L L + ++ +S + Q R ++
Sbjct: 231 SALLSHLINEQQWD----QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLL 286
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
E+F++ K LV + V+ARG+D ++ VV +P ++Y+H
Sbjct: 287 EDFKSGKIKYLVATGVAARGIDIDQLSRVVNYDLPFPADEYVH 329
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 434 (157.8 bits), Expect = 3.6e-40, P = 3.6e-40
Identities = 106/343 (30%), Positives = 180/343 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+S + ++ + GY + T +Q + L+G+D + A+TGTGK+ +F+LP +E
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + TQ + LIL PTRELA Q+A E + G+ L + GG + +
Sbjct: 63 LRQGQ----TQRKKRVRALILVPTRELAMQVA-EKVEQYGKDTGLKSLAVFGGVDEQAQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL D +LVATPGRL+D ++ V ++M+VLDEAD +LD+GF + + I+D
Sbjct: 118 QRL-IDGVDVLVATPGRLMDLYGQRA---VYFEEIEMVVLDEADRMLDMGFIESINKIID 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
CLP Q LLFSAT+ ++VR +++ ++ H S I Q + +
Sbjct: 174 CLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSN---ISQWLITVDKDTK 230
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
+L HL+ E + ++F T + L L + ++ +S + Q R ++
Sbjct: 231 SALLSHLINEQQWD----QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLL 286
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
E+F++ K LV + V+ARG+D ++ VV +P ++Y+H
Sbjct: 287 EDFKSGKIKYLVATGVAARGIDIDQLSRVVNYDLPFPADEYVH 329
>POMBASE|SPBC691.04 [details] [associations]
symbol:SPBC691.04 "mitochondrial ATP-dependent RNA
helicase Mss116 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC691.04 GO:GO:0005524
GO:GO:0006417 GO:GO:0008380 GO:GO:0005759 EMBL:CU329671
GO:GO:0006397 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0032543
EMBL:AB004535 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:NP_595596.1 ProteinModelPortal:O13622 STRING:O13622
EnsemblFungi:SPBC691.04.1 GeneID:2541136 KEGG:spo:SPBC691.04
OrthoDB:EOG437VPN NextBio:20802249 Uniprot:O13622
Length = 535
Score = 434 (157.8 bits), Expect = 3.6e-40, P = 3.6e-40
Identities = 123/372 (33%), Positives = 188/372 (50%)
Query: 381 FDECGISPLTIK-ALTAAGYIQMTRVQEATLSACLEGKD-AVVKAKTGTGKSIAFLLPAI 438
F E T K +L+ AG+ +MT VQ+ L+ ++ AVV+AKTGTGK++AFLL A
Sbjct: 39 FSEVASLSSTFKNSLSRAGFEKMTPVQQRVLNEVFPNEENAVVQAKTGTGKTLAFLLVAF 98
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ VLK + I+ +IL PTRELA QI EA L GI V +GG
Sbjct: 99 KDVLKGKPRLNSS---KIHSVILSPTRELALQIFEEARKLTYG-TGIRVSYAIGGNSKMR 154
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ + +L+ATPGRL DH++N L + +LDEAD L+D+GF + + NI
Sbjct: 155 EENAIRRGNANLLIATPGRLEDHLQNPRILES--LSTDSFILDEADRLMDMGFAESILNI 212
Query: 559 VDCLPRRR-QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
+ + + + L FSATMP +V + + +L + I+ + T ++ Q +
Sbjct: 213 HEAVTTTKTRKLCFSATMPPKVSNVFRGILGTDFKLINCLDPNEPPTHERVPQFVIETKL 272
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCST-GMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ F LL++ P ++IVF T MV + +L +K+ ++S R
Sbjct: 273 DKVFSSSLSLLQQLTSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQR 332
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
I+E FR + IL +DV ARGMD+P++T VVQ+ P + + YIH
Sbjct: 333 RSITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGE 392
Query: 737 XVLLLAPWEEYF 748
L+L E+ F
Sbjct: 393 AYLILLEQEKPF 404
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 431 (156.8 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 114/345 (33%), Positives = 184/345 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S +KA+ GY + +Q + A L GKD + A+TGTGK+ F LP +E
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K Q + LIL PTRELA+QI + + L H + + GG +
Sbjct: 63 LAKGPKVRANQ----VRALILTPTRELAAQIQ-DNVMLYGRHLPLKSAVVFGGVKINPQM 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+R+ ILVATPGRL+D + N++ +V+ L++LVLDEAD +LD+GF +D+ I+
Sbjct: 118 QRM-CKGADILVATPGRLMD-LYNQN--AVKFDQLEILVLDEADRMLDMGFIRDIHKILK 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP +RQ+LLFSAT E+R +++ ++ ++ + + + + + C+ P ++
Sbjct: 174 LLPEKRQNLLFSATFSTEIRELAKGLVNNP---VE-ISVSPANSTARTVEQCIY-PADVK 228
Query: 621 FQ--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+ +L L+KE G +V+VF T + L L E + ++ K Q R R
Sbjct: 229 KKPDMLVKLVKE---GNWQ-QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTR 284
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A + ILV +D++ARG+D P + VV +P E Y+H
Sbjct: 285 ALADFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVH 329
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 431 (156.8 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 114/345 (33%), Positives = 184/345 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S +KA+ GY + +Q + A L GKD + A+TGTGK+ F LP +E
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K Q + LIL PTRELA+QI + + L H + + GG +
Sbjct: 63 LAKGPKVRANQ----VRALILTPTRELAAQIQ-DNVMLYGRHLPLKSAVVFGGVKINPQM 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+R+ ILVATPGRL+D + N++ +V+ L++LVLDEAD +LD+GF +D+ I+
Sbjct: 118 QRM-CKGADILVATPGRLMD-LYNQN--AVKFDQLEILVLDEADRMLDMGFIRDIHKILK 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP +RQ+LLFSAT E+R +++ ++ ++ + + + + + C+ P ++
Sbjct: 174 LLPEKRQNLLFSATFSTEIRELAKGLVNNP---VE-ISVSPANSTARTVEQCIY-PADVK 228
Query: 621 FQ--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+ +L L+KE G +V+VF T + L L E + ++ K Q R R
Sbjct: 229 KKPDMLVKLVKE---GNWQ-QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTR 284
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A + ILV +D++ARG+D P + VV +P E Y+H
Sbjct: 285 ALADFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVH 329
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 431 (156.8 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 123/354 (34%), Positives = 182/354 (51%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
++K F + GISP I L A + T +QE ++ LEG++ + AKTG+GK+ AF LP
Sbjct: 5 TRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALP 64
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE K S I+ LIL PTRELA QI + AL N + L +VGG
Sbjct: 65 IIEKWSKDPSG--------IFALILTPTRELAIQIDEQFAALGANLNLKHAL-IVGGMDM 115
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVR-LMGLKMLVLDEADHLLDLGFRKDV 555
L P ++VATPGRL D I + ++ L +K LV+DEAD LL F D+
Sbjct: 116 IRQSIDLSKRP-HVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDL 174
Query: 556 ENIVDCLPRR--RQSLLFSATMPKEVRRISQLVLKREHT--YIDTVGLGSVETPVKIKQS 611
++ LP RQ+LLF+AT+ +R++ K ++ V ++ P ++QS
Sbjct: 175 DDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQS 234
Query: 612 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 671
+ ++ L HLL I I+F + L+Y +LR +++ V E++S
Sbjct: 235 YIFVSSQVREAYLVHLLT--IPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEM 292
Query: 672 PQLYRDRISE--EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R+RI+ FRA ILV +DV++RG+D P V V+ +P D + YIH
Sbjct: 293 VQ--RERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIH 344
>ASPGD|ASPL0000054998 [details] [associations]
symbol:AN0894 species:162425 "Emericella nidulans"
[GO:0000373 "Group II intron splicing" evidence=IEA] [GO:0034337
"RNA folding" evidence=IEA] [GO:0000372 "Group I intron splicing"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EnsemblFungi:CADANIAT00001763
HOGENOM:HOG000204197 OMA:DDEVPTH Uniprot:C8VUS9
Length = 641
Score = 445 (161.7 bits), Expect = 8.2e-40, P = 8.2e-40
Identities = 126/361 (34%), Positives = 192/361 (53%)
Query: 380 RFDECG---ISPLT-IKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
RF E G I P ++ LT ++ MT VQ T+ ++G D + +AKTGTGK++AFL
Sbjct: 78 RFAELGERNILPRNLVENLTKHMKLETMTEVQRRTILESVKGGDMLAQAKTGTGKTVAFL 137
Query: 435 LPAIE------AVLKATSSSTTQLVP-PIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
+P +E ++LK + + ++ P I +++ PTRELA QIA EA L+ G+ V
Sbjct: 138 IPVVEKLLGDRSLLKTSYRNGRKIAPIDIRAIVISPTRELAEQIAVEAKRLVAR-TGLQV 196
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
VGGT + +L+ + C ILVATPGRL D + + + VR L VLDEAD LL
Sbjct: 197 QVAVGGTMKRAALHQLQREGCHILVATPGRLKDLLTDPTS-GVRAPKLNTFVLDEADRLL 255
Query: 548 DLGFRKDVENIVDCLPRR----RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVE 603
D GF ++ I LP RQ+L+FSAT+ EV + + +KR+ ++ V V
Sbjct: 256 DEGFAPELMEIQHRLPDPAEVDRQTLMFSATVAPEVMGMVRSTMKRDFRFVKCVRDDEVP 315
Query: 604 TPVKIKQSCLVAPH-ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM 662
T + + Q ++ E L L+K+ +K IV+ + T+ + ++
Sbjct: 316 THMSVPQKAVILQGLENAMPTLLELVKKSYDPRSTFKAIVYFGSTRETNTAFEAFDQLLA 375
Query: 663 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 722
R R++ FR + IL ++DV+ARGMD+P+VT V+Q+G+P RE YI
Sbjct: 376 Q------------RTRVANWFRKCQSGILFSTDVTARGMDFPNVTHVIQIGVPKTREDYI 423
Query: 723 H 723
H
Sbjct: 424 H 424
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 447 (162.4 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 135/470 (28%), Positives = 225/470 (47%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF++ +S T++ L Y + T +Q T++ L G D V AKTG+GK++A ++P +E
Sbjct: 77 RFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLE 136
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ +A S L LI+ PTRELA Q + I + H G ++GG+ +
Sbjct: 137 ALWRAKWSPDYGLG----ALIISPTRELALQTFS-TINAVGAHHGFSCGLVIGGSDVAFE 191
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ R+ I+V TPGRLL H++ + +S L++LVLDEAD +LD+GF K + +I+
Sbjct: 192 RNRISG--INIIVCTPGRLLQHMDENAQMSCD--SLQVLVLDEADRMLDMGFSKQLNSII 247
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ LP RQ+LLFSAT + V+ + + V + ++ S TP +KQS ++ E
Sbjct: 248 NNLPAERQTLLFSATQTRNVKDLCR-VCTNDPVFVSVHENASAATPDNLKQSYVIVEEEH 306
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 677
L ++ H K +VF S+ L +++ + V ++ Q R
Sbjct: 307 KINALWSFIEAH----RKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRI 362
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+F SK +L+ +DV++RG+D+ + V+QV P + YIH
Sbjct: 363 ETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNS 422
Query: 738 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 793
+L+++P +E +P+ +++++ +A+ +KE A + +
Sbjct: 423 LLMVSPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILAE-SQELKEYAQKSIV 481
Query: 794 GYYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPPPL--FRKTALKMGLK 839
Y SI + K VE A A S GL P + K A K G K
Sbjct: 482 AYLRSIYTMKDKKVFDVEAIDAAALADSFGLVSVPRVRFLNKKAKKSGEK 531
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 427 (155.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 113/346 (32%), Positives = 189/346 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+SP ++A+ GY + T +Q+ + A LEG+D + A+TGTGK+ F LP ++
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ T + P+ LIL PTRELA+QI E + + I L + GG
Sbjct: 63 LI--TRQPHAKGRRPVRALILTPTRELAAQIG-ENVRDYSKYLNIRSLVVFGGVSINPQM 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +LVATPGRLLD +E+++ +V+L +++LVLDEAD +LD+GF D+ ++
Sbjct: 120 MKLRGG-VDVLVATPGRLLD-LEHQN--AVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP +RQ+LLFSAT +++ +++ +L H ++ +E + S V H +H
Sbjct: 176 KLPAKRQNLLFSATFSDDIKALAEKLL---HNPLE------IEVARRNTASDQVTQH-VH 225
Query: 621 F--QILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
F + L H++G +++ V+VF T + L L + + ++ K Q R
Sbjct: 226 FVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGART 285
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R +F++ +LV +D++ARG+D ++ VV +P E Y+H
Sbjct: 286 RALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVH 331
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 427 (155.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 124/382 (32%), Positives = 193/382 (50%)
Query: 382 DECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV 441
D G+S +KA+ A GY +T +Q+ + +G D + A+TGTGK+ AF LP ++A+
Sbjct: 4 DSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAI 63
Query: 442 LKAT---SSSTTQLVP-----------PIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
KA SSTT I LIL PTRELA+Q+A + I + I
Sbjct: 64 AKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVA-DNIKQFSQYLPIKS 122
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
+ GG + Q ++ +LVATPGRLL+H+ ++ V L +K LVLDEAD +L
Sbjct: 123 GVVYGGGKM-ASQTKMLKQGLDVLVATPGRLLEHLALRN---VDLSQVKFLVLDEADRML 178
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK 607
D+GF D+E ++ + + Q+L+FSAT V+ ++ +LK T +V + T K
Sbjct: 179 DMGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTI--SVSKENT-TSGK 235
Query: 608 IKQSCLVAPHELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVRE 666
IKQ+ E ++L L+ G +++ V+VF T + L L+ +
Sbjct: 236 IKQAVYWVTEERKRELLSELI-----GVNNWQQVLVFAGTKESANTLAKELKLDGIKAAL 290
Query: 667 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXX 726
+ K Q R++ E+F K +LV +DV+ARG+D PD+ VV +P E Y+H
Sbjct: 291 CHGDKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVG 350
Query: 727 XXXXXXXXXXXVLLLAPWEEYF 748
+ L++P +E F
Sbjct: 351 RTGRAGKSGTAISLVSPKDERF 372
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 426 (155.0 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 120/331 (36%), Positives = 175/331 (52%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
G+ T +Q AT G+D + A+TG+GK++AF LP ++ VL + + P+
Sbjct: 92 GFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKS--CRPLA 149
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
V+I PTRELA QI + + + D I V + GG K D++R ++VATPGR
Sbjct: 150 VVI-SPTRELAMQIYDQLVKFAEKVD-IQVACIFGGV--KKDEQREALKSAAVVVATPGR 205
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP-RRRQSLLFSATMP 576
L D ++N L L +K LVLDEAD +LD GF +D+++I+ +P +RQ+++F+AT P
Sbjct: 206 LKD-LQNDGSLD--LGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWP 262
Query: 577 KEVRRISQLVLKREHTYIDTVGLGSVETP---VKIKQSC-LVAPHELHFQILHHLLKEHI 632
VR ++ + T T+G P +IKQ +V PHE Q L +L H
Sbjct: 263 PIVRNLASTFMTSPVTV--TIGGDPSADPRANSRIKQVVEVVKPHEKE-QRLVQILNRHQ 319
Query: 633 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILV 692
GTPD KV+ FC + LLR V ++ Q R R E F++ +LV
Sbjct: 320 RGTPD-KVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLV 378
Query: 693 TSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+DV+ARG+D P V VV V P E Y+H
Sbjct: 379 ATDVAARGLDIPHVKLVVNVTFPLTVEDYVH 409
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 437 (158.9 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 118/342 (34%), Positives = 180/342 (52%)
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVL 442
+ GISP +KAL G ++ +Q+A L +EG+D + +A+TGTGK++AF +P I+ ++
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
K + P L+L PTRELA Q+ E ++ + + L GGT R
Sbjct: 180 KFNAKHGRGKNPQC--LVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRE 234
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L + V TPGR++D + K G ++ L ++ +VLDEAD +L +GF +DVE I+ L
Sbjct: 235 LNYG-IDVAVGTPGRIIDLM--KRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL 290
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 622
P +RQS++FSATMP +R +++ L T ID VG + I + A
Sbjct: 291 PAKRQSMMFSATMPSWIRSLTKKYLNNPLT-IDLVGDSDQKLADGITMYSIAADSYGRAS 349
Query: 623 ILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 681
I+ L+KEH G K IVF T L + L + K ++ Q R+R
Sbjct: 350 IIGPLVKEHGKGG---KCIVFTQTKRDADRLAFGLAKSYKCEA--LHGDISQAQRERTLA 404
Query: 682 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
FR ILV +DV+ARG+D P+V V+ +P + E ++H
Sbjct: 405 GFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVH 446
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 438 (159.2 bits), Expect = 3.3e-39, P = 3.3e-39
Identities = 123/355 (34%), Positives = 190/355 (53%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P++S F+ G P ++ + +AG+ T +Q + ++G+D V AKTG+GK++ +
Sbjct: 156 PLMS---FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGY 212
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
L+P + + + S ++ P I L+L PTRELA+QI EA+ ++ I L GG
Sbjct: 213 LIPGFLHLQRIRNDS--RMGPTI--LVLSPTRELATQIQEEAVKFGRS-SRISCTCLYGG 267
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
R LE I+VATPGRL D +E + + L + LVLDEAD +LD+GF
Sbjct: 268 APKGPQLRDLERG-ADIVVATPGRLNDILEMRR---ISLRQISYLVLDEADRMLDMGFEP 323
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPV---KIKQ 610
+ IV +P +RQ+L+++AT PK VR+I+ +L V +G+V+ V I Q
Sbjct: 324 QIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQ 379
Query: 611 SC-LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTG-MVTSLLYLLLREMKMNVREMY 668
+VAP E + L +L+ P KVI+FCST M L L R+ ++
Sbjct: 380 HIEVVAPMEKQRR-LEQILRSQ---EPGSKVIIFCSTKRMCDQLTRNLTRQF--GAAAIH 433
Query: 669 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
K Q RD + +FR+ + +LV +DV+ARG+D D+ +VV P E Y+H
Sbjct: 434 GDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 424 (154.3 bits), Expect = 4.5e-39, P = 4.5e-39
Identities = 114/346 (32%), Positives = 183/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+S I+ G + T VQE + A L+G+D + AKTG+GK+ AF+LP
Sbjct: 4 FESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
VL+ S ++ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 VLQKLSEDPYG----VFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVTQG 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P ++VATPGRL DHI +S ++ L ++ L++DEAD LL+ G F KD+E
Sbjct: 115 LELSKKP-HVVVATPGRLADHI--RSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEV 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I+ +P +RQ+LLFSAT+ ++++ + + R + V+T ++ Q ++ P
Sbjct: 172 ILSAVPAKRQTLLFSATLTDTLQQLQSIAMNRPFFWEHK---SDVQTVEELDQRFILTPE 228
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
++ L HL++ D+ +I+F +T +L ++LRE ++S Q R
Sbjct: 229 KVKDAYLVHLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRF 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+++ IL+ +DV+ARG+D P V V+ P + YIH
Sbjct: 289 ANLAKFKSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 334
>TAIR|locus:2160225 [details] [associations]
symbol:AT5G54910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AB005232 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
IPI:IPI00527032 RefSeq:NP_200302.1 UniGene:At.29471
ProteinModelPortal:Q9FFT9 SMR:Q9FFT9 STRING:Q9FFT9 PaxDb:Q9FFT9
PRIDE:Q9FFT9 EnsemblPlants:AT5G54910.1 GeneID:835582
KEGG:ath:AT5G54910 GeneFarm:988 TAIR:At5g54910 InParanoid:Q9FFT9
OMA:PEDGVGC PhylomeDB:Q9FFT9 ProtClustDB:CLSN2686959
Genevestigator:Q9FFT9 GermOnline:AT5G54910 Uniprot:Q9FFT9
Length = 739
Score = 443 (161.0 bits), Expect = 5.1e-39, P = 5.1e-39
Identities = 137/472 (29%), Positives = 228/472 (48%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F + IS T + L A Y+ MT VQ A + L G+D + A+TG+GK++AF++P +
Sbjct: 71 RKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPIL 130
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + S + +I+ PTRELA+Q + K H L L+GG R V
Sbjct: 131 EKLHRERWSPEDG----VGCIIISPTRELAAQTFGVLNKVGKFHKFSAGL-LIGG-REGV 184
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
D + ILV PGRLL H++ L++L+LDEAD +LD F+ ++ I
Sbjct: 185 DVEKERVHEMNILVCAPGRLLQHMDETPNFECPQ--LQILILDEADRVLDSAFKGQLDPI 242
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ LP+ RQ+LLFSAT K+V+ +++L L R+ YI TP + Q+ ++ P E
Sbjct: 243 ISQLPKHRQTLLFSATQTKKVKDLARLSL-RDPEYISVHAEAVTATPTSLMQTVMIVPVE 301
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYR 676
+L +K H+ + +++VF ST ++ +++ + + ++ + Q R
Sbjct: 302 KKLDMLWSFIKTHL----NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKR 357
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTS-VVQVGIPPDREQYIHXXXXXXXXXXXX 735
+ +F ++ +L +DV ARG+D+ VVQV P D YIH
Sbjct: 358 MGVYSQF-IERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQG 416
Query: 736 XXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKI---DNNVKEAAYHAW 792
+L L P EE N ++Q ++ +A + +++ A A+
Sbjct: 417 KSLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKLQ-EVSRLLAALLVKYPDLQGVAQRAF 475
Query: 793 LGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPLFRKTALKMGLKDI 841
+ Y SI + RDK + +L+ F+ S+GL P + R T LK K +
Sbjct: 476 ITYLRSIHK-RRDKEIFDVSKLSIENFSASLGLPMTPRI-RFTNLKTKKKGV 525
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 421 (153.3 bits), Expect = 9.5e-39, P = 9.5e-39
Identities = 117/346 (33%), Positives = 184/346 (53%)
Query: 379 KRFDECG-ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+ F + G I+PL +KA+ G+ T +Q+ + LEG + V +A TGTGK+ A+LLP
Sbjct: 2 EEFKKLGLITPL-LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
++ + + + VLI+ PTRELA Q+A E +A L + + L + GG +
Sbjct: 61 LQRIQRGKKAQ---------VLIVTPTRELALQVADE-VAKLGKYLKVRALAVYGGQAIE 110
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
R L +++V TPGR+LDHI K+ + + K+++LDEAD +LD+GF D+E
Sbjct: 111 RQIRGLRQG-VEVIVGTPGRILDHIGRKTFPAAEI---KIVILDEADEMLDMGFIDDIEA 166
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I++ L R+Q+LLFSAT+P ++ I + L T + VG +T I+Q P
Sbjct: 167 ILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKT-VKLVG--REKTVPAIRQVYYELPE 223
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ L +L + P + IVFC T + L + ++ Q R
Sbjct: 224 TEKIEGLVSILNSEL---P-IQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERT 279
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ + F+A K +LV +DV+ARG+D PDV+ V+ IP + E YIH
Sbjct: 280 QTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIH 325
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 421 (153.3 bits), Expect = 9.5e-39, P = 9.5e-39
Identities = 117/346 (33%), Positives = 184/346 (53%)
Query: 379 KRFDECG-ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+ F + G I+PL +KA+ G+ T +Q+ + LEG + V +A TGTGK+ A+LLP
Sbjct: 2 EEFKKLGLITPL-LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
++ + + + VLI+ PTRELA Q+A E +A L + + L + GG +
Sbjct: 61 LQRIQRGKKAQ---------VLIVTPTRELALQVADE-VAKLGKYLKVRALAVYGGQAIE 110
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
R L +++V TPGR+LDHI K+ + + K+++LDEAD +LD+GF D+E
Sbjct: 111 RQIRGLRQG-VEVIVGTPGRILDHIGRKTFPAAEI---KIVILDEADEMLDMGFIDDIEA 166
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I++ L R+Q+LLFSAT+P ++ I + L T + VG +T I+Q P
Sbjct: 167 ILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKT-VKLVG--REKTVPAIRQVYYELPE 223
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ L +L + P + IVFC T + L + ++ Q R
Sbjct: 224 TEKIEGLVSILNSEL---P-IQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERT 279
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ + F+A K +LV +DV+ARG+D PDV+ V+ IP + E YIH
Sbjct: 280 QTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIH 325
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 421 (153.3 bits), Expect = 9.5e-39, P = 9.5e-39
Identities = 114/346 (32%), Positives = 183/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +S + A+ GY + T +Q+ + L GKD + A+TGTGK+ +F+LP +E
Sbjct: 3 FSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQ 62
Query: 441 VLKATSSSTTQL-VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +L I LIL PTRELA Q+ A K D I + + GG +
Sbjct: 63 LNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLD-ISSMAMYGGVDAQEQ 121
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++RL ILVATPGRLLD + + L MLVLDEAD +LD+GF D+ I+
Sbjct: 122 KQRLIWG-VDILVATPGRLLDMTHQRV---LHFDELDMLVLDEADRMLDMGFIDDINKII 177
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYID-TVGLGSVETPVKIKQSCLVAPHE 618
+ LP RQ+LLFSATM +EVR +++ + H ++ ++G P KI+Q LV +
Sbjct: 178 ERLPEHRQNLLFSATMSEEVRGLAKRTI---HKPVEISIGADKASKP-KIEQ-WLVTVDK 232
Query: 619 LHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ L HI+ T +++ ++F T + L L + + ++S + Q R+
Sbjct: 233 AN----KSALLSHIITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIRE 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+I +F++ K LV + ++ARG+D +++ V+ +P + YIH
Sbjct: 289 KILNDFKSGKIKFLVATAIAARGLDIGELSRVINYDLPAQVDDYIH 334
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 420 (152.9 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 115/346 (33%), Positives = 178/346 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++P ++ G + T VQ + + L+G+D + AKTG+GK+ AF+LP ++
Sbjct: 4 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQ- 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
VL I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 63 VLSEDPYG-------IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCVVVGGLDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ LK LVLDEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSLKK--LKFLVLDEADRLLEQGCADFTADLEV 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I++ +P RRQ+LLFSAT+ + + L + R + V T ++ Q L+ P
Sbjct: 172 ILEAVPARRQTLLFSATLTDTLNELKSLAMNRPFFW---EAASEVRTVDELDQRYLLVPE 228
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ L HL++ D+ +I+F T +L ++LR+ ++S Q R
Sbjct: 229 AVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRF 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++S IL+ +DV+ARG+D P V V+ P + YIH
Sbjct: 289 AALAKFKSSIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 420 (152.9 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 115/346 (33%), Positives = 178/346 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++P ++ G + T VQ + + L+G+D + AKTG+GK+ AF+LP ++
Sbjct: 7 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQ- 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
VL I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 66 VLSEDPYG-------IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCVVVGGLDMVAQA 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ LK LVLDEAD LL+ G F D+E
Sbjct: 118 LELSRKP-HVVIATPGRLADHLRSSNTFSLKK--LKFLVLDEADRLLEQGCADFTADLEV 174
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I++ +P RRQ+LLFSAT+ + + L + R + V T ++ Q L+ P
Sbjct: 175 ILEAVPARRQTLLFSATLTDTLNELKSLAMNRPFFW---EAASEVRTVDELDQRYLLVPE 231
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ L HL++ D+ +I+F T +L ++LR+ ++S Q R
Sbjct: 232 AVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRF 291
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++S IL+ +DV+ARG+D P V V+ P + YIH
Sbjct: 292 AALAKFKSSIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 337
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 419 (152.6 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 114/367 (31%), Positives = 192/367 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+ + + G+ + T++Q+ + A + G D + +KTG+GK++AF++PA++
Sbjct: 2 QFSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ K + S P V+IL PTRELA Q+ ++ N VL L GG F
Sbjct: 62 RLSKNRALSKRD--PR--VVILTPTRELAKQVFSQLRLFTANTQYKAVLIL-GGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ +P + +VATPGRL DH+ G L GL++L+LDEAD +LDLGF K++ I
Sbjct: 117 VKVLQKEP-EFIVATPGRLADHLTQ--G-HFHLNGLELLILDEADRMLDLGFSKELTQIN 172
Query: 560 DCLP-RRRQSLLFSATMPK-EVRRIS-QLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
R+RQ+LLFSAT+ +V + +L+ K + I+ G E V I + +A
Sbjct: 173 KAADHRKRQTLLFSATLDHAQVNEFATELLTKPKRIAINA---GHSEH-VDIAKRFYLAD 228
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ + L L+ ++ ++I+F +T T L LL E +N + Q R
Sbjct: 229 NLTQKEAL---LQHFLVTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQR 285
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
++I E F + ILVT+D+++RG+D +V+ V+ +P E+++H
Sbjct: 286 NQIMESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRAGTKGD 345
Query: 737 XVLLLAP 743
+ L+ P
Sbjct: 346 AISLVGP 352
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 419 (152.6 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 114/367 (31%), Positives = 192/367 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+ + + G+ + T++Q+ + A + G D + +KTG+GK++AF++PA++
Sbjct: 2 QFSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ K + S P V+IL PTRELA Q+ ++ N VL L GG F
Sbjct: 62 RLSKNRALSKRD--PR--VVILTPTRELAKQVFSQLRLFTANTQYKAVLIL-GGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ +P + +VATPGRL DH+ G L GL++L+LDEAD +LDLGF K++ I
Sbjct: 117 VKVLQKEP-EFIVATPGRLADHLTQ--G-HFHLNGLELLILDEADRMLDLGFSKELTQIN 172
Query: 560 DCLP-RRRQSLLFSATMPK-EVRRIS-QLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
R+RQ+LLFSAT+ +V + +L+ K + I+ G E V I + +A
Sbjct: 173 KAADHRKRQTLLFSATLDHAQVNEFATELLTKPKRIAINA---GHSEH-VDIAKRFYLAD 228
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ + L L+ ++ ++I+F +T T L LL E +N + Q R
Sbjct: 229 NLTQKEAL---LQHFLVTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQR 285
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
++I E F + ILVT+D+++RG+D +V+ V+ +P E+++H
Sbjct: 286 NQIMESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRAGTKGD 345
Query: 737 XVLLLAP 743
+ L+ P
Sbjct: 346 AISLVGP 352
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 418 (152.2 bits), Expect = 2.0e-38, P = 2.0e-38
Identities = 119/345 (34%), Positives = 178/345 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S +KA+ G+ + T +Q T+ L+ KD + +A+TGTGK+ AF +P +E
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEA--IALLKNHDGIGVLTLVGGTRFKV 498
V S+ + L++ PTRELA Q++ E I +K + VL + GG +
Sbjct: 64 VNVKNSA--------VQALVVAPTRELAIQVSEELYKIGAVKR---VRVLPIYGGQDIER 112
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ P ++V TPGR++DHI N+ L RL + +VLDEAD +L++GF +D+E I
Sbjct: 113 QIRALKKHP-HVIVGTPGRIIDHI-NRGTL--RLEHVHTVVLDEADEMLNMGFIEDIEAI 168
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ +P RQ+LLFSATMP +RRI++ + + V + P I+Q L +
Sbjct: 169 LSHVPAERQTLLFSATMPDPIRRIAERFMNEPE--LVKVKAKEMTVP-NIQQYYLEVHEK 225
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
F IL LL + P+ IVF T L L ++ Q R
Sbjct: 226 KKFDILTRLLD---IQAPEL-AIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLS 281
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ +F+ ILV +DV+ARG+D VT V IP D E Y+H
Sbjct: 282 VLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVH 326
>FB|FBgn0037561 [details] [associations]
symbol:CG9630 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P10081 KO:K14809
GeneTree:ENSGT00550000074969 EMBL:AY051513 RefSeq:NP_649777.1
UniGene:Dm.1101 ProteinModelPortal:Q9VHU1 SMR:Q9VHU1 IntAct:Q9VHU1
STRING:Q9VHU1 PaxDb:Q9VHU1 PRIDE:Q9VHU1 EnsemblMetazoa:FBtr0081866
GeneID:40974 KEGG:dme:Dmel_CG9630 UCSC:CG9630-RA
FlyBase:FBgn0037561 InParanoid:Q9VHU1 OMA:CACVEYW OrthoDB:EOG4TDZ1Q
PhylomeDB:Q9VHU1 GenomeRNAi:40974 NextBio:821545 Bgee:Q9VHU1
GermOnline:CG9630 Uniprot:Q9VHU1
Length = 613
Score = 430 (156.4 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 127/388 (32%), Positives = 193/388 (49%)
Query: 376 LSQKRFDECGISPLT---IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
+S+K++ PL+ ++ + + G+ QMT VQ A + L KD +A TG+GK++A
Sbjct: 1 MSRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLA 60
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--- 489
FL+P +E +L+ T I L++ PTRELA QI+ E +A H+ + L
Sbjct: 61 FLVPMLE-ILQRRHKETPWGPKEIGALVISPTRELARQIS-EVLAQFLEHEDLEHLNQQL 118
Query: 490 LVGGTRFKVDQRRLESD-PCQILVATPGRLLDHIENKS---GLSVRLMGLKMLVLDEADH 545
+VGG + D L + PC ILV TPGRL D + K L+ ++ L+ LVLDEAD
Sbjct: 119 IVGGNSIEEDIATLRRETPC-ILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADR 177
Query: 546 LLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETP 605
LLDLGF+ V NI+ LPR+R++ LFSAT EV + + L R + SV TP
Sbjct: 178 LLDLGFKTSVNNILGYLPRQRRTGLFSATQTTEVTDLIRAGL-RNPVLVSVKEKASVNTP 236
Query: 606 VKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVF-----CSTGMVTSLLYLLLREM 660
+++ + EL F L L T KV+VF C +L LL +
Sbjct: 237 ARLQNFYRIVEPELKFVALLEFLSSP--ATVIGKVMVFFPTCACVEYWAEALPPLLPKRT 294
Query: 661 KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 720
+ + K R + E+FR + + +L+ +DV ARG+D P++ VVQ P
Sbjct: 295 VLGIHGKMKNK----RANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASS 350
Query: 721 YIHXXXXXXXXXXXXXXVLLLAPWEEYF 748
++H ++ L P E+ +
Sbjct: 351 FVHRVGRTARQGNEGNALVFLLPSEDAY 378
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 416 (151.5 bits), Expect = 3.3e-38, P = 3.3e-38
Identities = 119/375 (31%), Positives = 187/375 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E G+ +KA G+ +++Q L LEGKD + A+TG+GK+ AF +P +
Sbjct: 9 KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPIL 68
Query: 439 EAVLKATSSSTTQLV----PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+A+L+ S + P + +L PTRELA QIA E L + LVGG
Sbjct: 69 QALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA-EQFEALGADISLRCAVLVGGI 127
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
L P ++VATPGRL DH+ + G S++ LK LVLDEAD LL+ F K
Sbjct: 128 DRMQQTIALGKRP-HVIVATPGRLWDHMSDTKGFSLK--SLKYLVLDEADRLLNEDFEKS 184
Query: 555 VENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLV 614
+ I++ +P R++ LFSATM K+VR++ + L R I+ S +K + +
Sbjct: 185 LNQILEEIPLERKTFLFSATMTKKVRKLQRACL-RNPVKIEAASKYSTVDTLKQQYRFVA 243
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
A ++ + + ++L E P+ ++F T T L L+LR + + + Q
Sbjct: 244 AKYKDCYLV--YILSE----MPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQS 297
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R +F+A + ILV +DV++RG+D P V V+ IP + + YIH
Sbjct: 298 KRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRS 357
Query: 735 XXXVLLLAPWE-EYF 748
+ L+ +E E++
Sbjct: 358 GVGISLVNQYELEWY 372
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 415 (151.1 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 119/349 (34%), Positives = 184/349 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE G + + A G+ + T +Q L G+D V A+TG+GK++++ LPAI
Sbjct: 142 FDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVH 201
Query: 441 VLKATSSSTTQLVP---PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ ++ L P PI VLIL PTRELA QI AE I+ I + GG K
Sbjct: 202 I-----NAQPLLAPGDGPI-VLILAPTRELAVQIQAE-ISKFGKSSRIRNTCVYGGVP-K 253
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
Q R S ++ +ATPGRL+D +E +G + L + LVLDEAD +LD+GF +
Sbjct: 254 GPQIRDLSRGVEVCIATPGRLIDMLE--AGRT-NLRRVTYLVLDEADRMLDMGFEPQIRK 310
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPV--KIKQSC-LV 614
I+ + RQ+ ++SAT PKEVR+++ L + YI V +GS++ +I Q ++
Sbjct: 311 IISQIRPDRQTCMWSATWPKEVRQLASDFL---NNYIQ-VNIGSMDLSANHRITQIVEVI 366
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
+ E +++ HL E I+ K +VF T + + LR+ ++ K Q
Sbjct: 367 SEFEKRDRMIKHL--EKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQ 424
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
RD + EF+ K I+V +DV++RG+D D+T V+ P + E Y+H
Sbjct: 425 ERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVH 473
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 415 (151.1 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 114/346 (32%), Positives = 180/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSIKK--IRFLVMDEADRLLEQGCTDFTVDLEA 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I+ +P RRQ+LLFSAT+ +R + L + + + +VE ++ Q L+ P
Sbjct: 172 ILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVE---QLDQRYLLVPE 228
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
++ L HL++ D+ +I+F +T +L ++LR+ ++S Q R
Sbjct: 229 KVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERF 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 289 AALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 415 (151.1 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 114/346 (32%), Positives = 180/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSIKK--IRFLVMDEADRLLEQGCTDFTVDLEA 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I+ +P RRQ+LLFSAT+ +R + L + + + +VE ++ Q L+ P
Sbjct: 172 ILAAVPARRQTLLFSATLTDTLRELQSLATNQPFFWEAQAPVRTVE---QLDQRYLLVPE 228
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
++ L HL++ D+ +I+F +T +L ++LR+ ++S Q R
Sbjct: 229 KVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERF 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 289 AALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 415 (151.1 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 119/373 (31%), Positives = 175/373 (46%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P S F + I P ++A+ GY T +Q AT+ A + G D V A+TGTGK+ AF
Sbjct: 8 PAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAF 67
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVG 492
+P + + T VP L+L PTRELA Q+A EA + + VL + G
Sbjct: 68 AIPMLSKI------DITSKVPQ--ALVLVPTRELALQVA-EAFGRYGAYLSQLNVLPIYG 118
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G+ + V L Q++V TPGR++DH+E + + L + LVLDEAD +L +GF
Sbjct: 119 GSSYAVQLAGLRRG-AQVVVGTPGRMIDHLERAT---LDLSRVDFLVLDEADEMLTMGFA 174
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC 612
DVE I+ P +Q LFSATMP +R++S L H + I QS
Sbjct: 175 DDVERILSETPEYKQVALFSATMPPAIRKLSAKYL---HDPFEVTCKAKTAVAENISQSY 231
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+ ++ L +L+ P +IVF T T + LR + + P
Sbjct: 232 IQVARKM--DALTRVLEVE----PFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVP 285
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 732
Q R+R R ILV +DV+ARG+D ++ V+ IP D E Y+H
Sbjct: 286 QAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAG 345
Query: 733 XXXXXVLLLAPWE 745
++ ++P E
Sbjct: 346 RSGAALIFVSPRE 358
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 415 (151.1 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 117/344 (34%), Positives = 178/344 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ +P + + A GY + T +Q + LEG D + A+TGTGK+ A+ LP I+
Sbjct: 3 FESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQK 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ST + + L+L PTRELA QIA E+ L I ++ GG
Sbjct: 63 ML-----STPR--GRVRTLVLAPTRELACQIA-ESFRSLGQRARIRECSIYGGVNMDQQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RRL S ++VA PGRLLDHI G ++ + G++ L++DEAD + D+GF+ D+++I+
Sbjct: 115 RRLRSG-VDVVVACPGRLLDHIWR--G-TIDICGVETLIIDEADRMFDMGFQPDIQSILK 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
CL + Q+LLFSATMP EVR+ L L+ + + T+ +G+ + S V P + H
Sbjct: 171 CLVQPHQTLLFSATMPPEVRK---LTLETQTNPV-TIQIGTQAPASSVSHS--VYPVKNH 224
Query: 621 FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
+ LL E IL T + K V++F T L + + Q R +
Sbjct: 225 QKT--PLLIE-ILKTTETKSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAV 281
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
E FR ILV +D++ARG+D ++ V+ +P E Y H
Sbjct: 282 MEGFRRGNFKILVATDIAARGLDIDHISHVINYDMPDTPEDYTH 325
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 412 (150.1 bits), Expect = 9.1e-38, P = 9.1e-38
Identities = 117/349 (33%), Positives = 177/349 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ G++ ++L A T +Q A + A L+G D + AKTG+GK+IAF P +
Sbjct: 3 FNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPML-- 60
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
T S I+ LIL PTRELA QIA + AL N + I V +VGG F
Sbjct: 61 ----TQWSEDPF--GIFGLILTPTRELALQIAEQFAALGANMN-IKVAVVVGGEDFVQQT 113
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVR-LMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ P ++ATPGRL DHI N ++ L +K LVLDEAD LL F D++
Sbjct: 114 LALQRKP-HFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCF 172
Query: 560 DCLPR--RRQSLLFSATMPKEVRRISQL--VLKREHTYIDTVG-LGSVETPVKIKQSCLV 614
D LP +RQ+LLF+AT+ VR + + + ++ V + V P ++ S +
Sbjct: 173 DVLPTSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVF 232
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
P + L+ +L H+ D ++F + +L +LR++ V ++S PQ
Sbjct: 233 VPSYVKEAYLNSIL--HLEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQS 290
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R F+A IL+ +DV++RG+D P V V+ IP D + +IH
Sbjct: 291 ERTNSLHRFKAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIH 339
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 412 (150.1 bits), Expect = 9.1e-38, P = 9.1e-38
Identities = 119/401 (29%), Positives = 190/401 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + A+ A GY + + +Q+ ++ L G D + +A+TGTGK+ AF LP + +
Sbjct: 13 LHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRI---- 68
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
++ P LIL PTRELA Q+A K G+ V+ + GG + + +
Sbjct: 69 --DPSKREPQ--ALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRN 124
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
QI+VATPGRL DH+ + L + LVLDEAD +L LGF D+E I +P
Sbjct: 125 G-AQIVVATPGRLCDHLRRDEKV---LATVNHLVLDEADEMLKLGFMDDLEVIFKAMPET 180
Query: 566 RQSLLFSATMPKEVRRISQLVLKR-EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 624
RQ++LFSAT+P+ +R I++ LK +H I + +T I+Q+ L+ + +
Sbjct: 181 RQTVLFSATLPQSIRAIAERHLKDPKHVKIQS----KTQTVTAIEQAHLLVHADQKTSAV 236
Query: 625 HHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 683
LL+ D+ +I+F T T L L + Q R+R+ +
Sbjct: 237 LSLLE-----VEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSL 291
Query: 684 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 743
+ + I+V +DV+ARG+D P +T V V +P D E Y+H +LL+ P
Sbjct: 292 KDGRLDIVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTP 351
Query: 744 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNV 784
E P+ Q +D + K+ N++
Sbjct: 352 RERRMLQVIERVTGQKVAEVRL-PDAQAVLDARIKKLTNSL 391
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 426 (155.0 bits), Expect = 9.4e-38, P = 9.4e-38
Identities = 119/394 (30%), Positives = 208/394 (52%)
Query: 336 KSLEDEHDFEEQVELIR-KEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKAL 394
K E+E + EE+VE+ KE+ P + F +S +K +
Sbjct: 86 KQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKGI 145
Query: 395 TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP 454
+ + T +Q A++ L GKD V A+TG+GK+ A+++P IE +L S+ST
Sbjct: 146 AELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTK---- 201
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
V+IL PTRELA Q+ L + + + + VGG + + +L++ P I++AT
Sbjct: 202 ---VIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRP-DIVIAT 257
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR-RRQSLLFSA 573
PGRL+DHI N SV+ +++LV+DEAD +L+ GF+ ++ I+ +P+ +RQ+LLFSA
Sbjct: 258 PGRLIDHIRNSPSFSVQ--DIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSA 315
Query: 574 TMPKEVRRISQLVLKRE-HTYID---TVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
TM ++ + QL L++ ID +V ++ V+I++ + P +L+ LLK
Sbjct: 316 TMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKP-----ALLYQLLK 370
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
G +V+VF + L ++L + + V E++ Q R + + F++ +
Sbjct: 371 ----GVSS-RVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVP 425
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+L+ +D++ARG+D P + V+ +P E Y+H
Sbjct: 426 VLICTDLAARGLDIPKIELVINYDMPKTFEIYLH 459
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 426 (155.0 bits), Expect = 9.4e-38, P = 9.4e-38
Identities = 119/394 (30%), Positives = 208/394 (52%)
Query: 336 KSLEDEHDFEEQVELIR-KEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKAL 394
K E+E + EE+VE+ KE+ P + F +S +K +
Sbjct: 86 KQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKGI 145
Query: 395 TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP 454
+ + T +Q A++ L GKD V A+TG+GK+ A+++P IE +L S+ST
Sbjct: 146 AELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTK---- 201
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
V+IL PTRELA Q+ L + + + + VGG + + +L++ P I++AT
Sbjct: 202 ---VIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRP-DIVIAT 257
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR-RRQSLLFSA 573
PGRL+DHI N SV+ +++LV+DEAD +L+ GF+ ++ I+ +P+ +RQ+LLFSA
Sbjct: 258 PGRLIDHIRNSPSFSVQ--DIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSA 315
Query: 574 TMPKEVRRISQLVLKRE-HTYID---TVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 629
TM ++ + QL L++ ID +V ++ V+I++ + P +L+ LLK
Sbjct: 316 TMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIRKRDQLKP-----ALLYQLLK 370
Query: 630 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 689
G +V+VF + L ++L + + V E++ Q R + + F++ +
Sbjct: 371 ----GVSS-RVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVP 425
Query: 690 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+L+ +D++ARG+D P + V+ +P E Y+H
Sbjct: 426 VLICTDLAARGLDIPKIELVINYDMPKTFEIYLH 459
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 436 (158.5 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 119/344 (34%), Positives = 180/344 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+ P ++ L +AG+ T +Q T L+ +D V AKTG+GK++ +L+PA
Sbjct: 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF-- 494
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L + ++ P VLIL PTRELA+QI EA+ ++ I L GG
Sbjct: 495 ILLRHCRNDSRNGPT--VLILAPTRELATQIQDEALRFGRS-SRISCTCLYGGAPKGPQL 551
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ LE I+VATPGRL D +E K + + +LVLDEAD +LD+GF + IV+
Sbjct: 552 KELERG-ADIVVATPGRLNDILEMKM---IDFQQVSLLVLDEADRMLDMGFEPQIRKIVN 607
Query: 561 CLPRRRQSLLFSATMPKEVRRI-SQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+P RRQ+L+++AT PKEVR+I S L++ I V + I Q V P
Sbjct: 608 EIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVD--ELAANKAITQYVEVVPQME 665
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
+ L +L+ G+ KVI+FCST + L + ++ K Q RD +
Sbjct: 666 KERRLEQILRSQERGS---KVIIFCSTKRLCDHLARSVGR-HFGAVVIHGDKTQGERDWV 721
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+FR+ K +L+ +DV+ARG+D D+ V+ P E Y+H
Sbjct: 722 LNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVH 765
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 410 (149.4 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 113/346 (32%), Positives = 180/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSIKK--IRFLVMDEADRLLEQGCTDFTVDLEA 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I+ +P RRQ+LLFSAT+ ++ + L + + + +VE ++ Q L+ P
Sbjct: 172 ILAAVPTRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAPVRTVE---QLDQRYLLVPE 228
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
++ L HL++ D+ +I+F +T +L ++LR+ ++S Q R
Sbjct: 229 KVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERF 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 289 AALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 409 (149.0 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 123/372 (33%), Positives = 179/372 (48%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S F + +K L++ GY QMT +Q TL L+GKD + +AKTG+GK+ AF L
Sbjct: 8 SSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGL- 66
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
A+L + I +++CPTRELA Q+A E L + I +LTL GGT F
Sbjct: 67 ---ALLNKLEVKKFR----IQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPF 119
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
LE ++V TPGRL +H+ G +++L L +LVLDEAD +L++GF+ ++
Sbjct: 120 GPQIGSLEHG-AHVIVGTPGRLEEHVIK--G-TLQLDNLNLLVLDEADRMLEMGFQAALD 175
Query: 557 NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL-VA 615
NIV P RQ+LLFSAT P +++ IS+ ++ T V + S E I Q V
Sbjct: 176 NIVGRTPLDRQTLLFSATFPDQIKSISESIM----TDPVMVKIASSEDQSTISQKFFKVG 231
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
+ L LL LG +FC+T T + L +V ++ Q
Sbjct: 232 NDDDRLDALRLLL----LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRD 287
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
RD+ F ILV +DV+ARG+D + V+ I D E ++H
Sbjct: 288 RDQTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTG 347
Query: 736 XXVLLLAPWEEY 747
L + E Y
Sbjct: 348 IAYSLFSDKESY 359
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 409 (149.0 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 123/372 (33%), Positives = 179/372 (48%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S F + +K L++ GY QMT +Q TL L+GKD + +AKTG+GK+ AF L
Sbjct: 8 SSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGL- 66
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
A+L + I +++CPTRELA Q+A E L + I +LTL GGT F
Sbjct: 67 ---ALLNKLEVKKFR----IQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPF 119
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
LE ++V TPGRL +H+ G +++L L +LVLDEAD +L++GF+ ++
Sbjct: 120 GPQIGSLEHG-AHVIVGTPGRLEEHVIK--G-TLQLDNLNLLVLDEADRMLEMGFQAALD 175
Query: 557 NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL-VA 615
NIV P RQ+LLFSAT P +++ IS+ ++ T V + S E I Q V
Sbjct: 176 NIVGRTPLDRQTLLFSATFPDQIKSISESIM----TDPVMVKIASSEDQSTISQKFFKVG 231
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
+ L LL LG +FC+T T + L +V ++ Q
Sbjct: 232 NDDDRLDALRLLL----LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRD 287
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
RD+ F ILV +DV+ARG+D + V+ I D E ++H
Sbjct: 288 RDQTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTG 347
Query: 736 XXVLLLAPWEEY 747
L + E Y
Sbjct: 348 IAYSLFSDKESY 359
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 409 (149.0 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 114/345 (33%), Positives = 174/345 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G P + AAGY T +Q + A + G+D + A+TGTGK+ AF LP +
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L++ PTRELA QI ++ L + +T+ GG
Sbjct: 63 LQQGERGR-------VRALVIAPTRELAEQIN-DSFVTLGRQTRLRSVTVYGGVGVNPQV 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L++ +++VA PGRLLDHI G ++ L L++LVLDEAD + D+GF D+ ++
Sbjct: 115 QKLKAG-AEVVVACPGRLLDHIAQ--G-TIDLSRLEVLVLDEADQMFDMGFLPDIRRVLK 170
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYID--TVGLGSVETPVKIKQSCLVAPHE 618
LP RRQ+LLFSATMP ++R ++Q +L +D TV +G+V V + + + P E
Sbjct: 171 HLPPRRQTLLFSATMPIDIRTLAQDIL------VDPVTVQVGTVAPAVTVAHA--LYPVE 222
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
H + LL E + T V++F T L L + + Q R
Sbjct: 223 QHLKT--PLLLELLRHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQA 280
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ FR ILV +D++ARG+D V+ V+ IP E YIH
Sbjct: 281 ALDGFRDGTFQILVATDIAARGIDVSQVSHVINYDIPDTAEAYIH 325
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 420 (152.9 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 105/348 (30%), Positives = 191/348 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI-E 439
F+E + K + +GY+++T +Q+ ++ + G+D + A+TG+GK+ AFLLP +
Sbjct: 288 FEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAH 347
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++K SS Q + +I+ PTREL +QI +A + + + GGT+
Sbjct: 348 LMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDA-RKFSYGTCVRPVVIYGGTQMFHS 406
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+++ S+ C IL ATPGRLLD I + + L L+ LVLDEAD +LD+GFR+D+EN++
Sbjct: 407 LKQI-SEGCNILCATPGRLLDVIRKEK---IGLTKLRYLVLDEADRMLDMGFREDIENLL 462
Query: 560 DC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
+P + RQ+L+FSAT P ++ +++ +LK ++ ++ +G + V+ Q +
Sbjct: 463 KSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVE--QMVIEV 520
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
L +L+E +G+ + +VF T + L + K+ ++ + Q
Sbjct: 521 DEFGKKDKLMEILQE--IGSE--RTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKE 576
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ +FR + ++V + V+ARG+D +V+ V+ IP D ++Y+H
Sbjct: 577 RETALRDFRTGQCPVIVATSVAARGLDIENVSYVINFDIPDDIDEYVH 624
Score = 52 (23.4 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 23/87 (26%), Positives = 32/87 (36%)
Query: 202 NDGETVIPSRNVMDFVRRAYFSG-TDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLG-N 259
+D T+ +R F RR F+ T R G ++ G + GN+ F N G N
Sbjct: 120 DDNRTIDDNRRRGGFQRRGGFNDETSGRGRRGVRGGTSFSGFGREDGNEQSGFTSNDGFN 179
Query: 260 NRENGDSKNMSEFMKKKCFVGKRRFKR 286
N +G F G R R
Sbjct: 180 NETSGFGSGRRGSRGDSSFSGDRESDR 206
Score = 42 (19.8 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 228 RNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENG 264
+NF ++ + +AG D + R GN R G
Sbjct: 61 QNFEFSERGFGKQRAGSDANQNFESSERGFGNRRGKG 97
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 408 (148.7 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 115/371 (30%), Positives = 181/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA Q+ K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---IITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKE 132
Query: 506 DPCQILVATPGRLLDHIENK-SGLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 QGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENYYMVCKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 677
F L H L+ H K ++F ST L + +V+ M K + R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKHKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR + ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 407 (148.3 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 113/370 (30%), Positives = 180/370 (48%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++ K F + ++ L + GY +MT +Q +L L GKD + +AKTG+GK+ AF +
Sbjct: 1 MNPKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+ L A S + L+LCPTRELA Q+ E L + D I +LT+ GG
Sbjct: 61 GLLSR-LDALSFR-------VQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVP 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
F LE +++ TPGRLLDH+ + G S+ L L+ LVLDEAD +LD+GF+ D+
Sbjct: 113 FGPQLGSLEHG-AHVVIGTPGRLLDHL--RRG-SLDLSALRTLVLDEADRMLDMGFQDDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
++ P +RQ+LLFSAT P + +S V +RE V + V I+Q
Sbjct: 169 SALIAAAPPKRQTLLFSATYPDSIAAMSAGV-QREPV---EVSVDEVHGEGAIEQVFYEV 224
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
+ + +L + P+ ++FC+T + + L ++ Q
Sbjct: 225 DSGQRIEAVERILGHY---RPE-SALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRE 280
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
RDR+ F +LV +DV+ARG+D ++++V+ + + E + H
Sbjct: 281 RDRVLVRFANRSASVLVATDVAARGLDIKELSAVINYELTRNPEVHTHRIGRTGRAGERG 340
Query: 736 XXVLLLAPWE 745
V L+ P E
Sbjct: 341 LAVSLVTPRE 350
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 422 (153.6 bits), Expect = 3.7e-37, P = 3.7e-37
Identities = 118/348 (33%), Positives = 185/348 (53%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
++ F E G+S ++AL GY + T +Q A++ + GKD + +A+TGTGK+ AF LP
Sbjct: 5 ERTFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPL 64
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ K TS +T Q +L+L PTRELA Q+A + K VL + GG +
Sbjct: 65 LN---KVTSQTTPQ------ILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQ 115
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
L+ P Q++V TPGR++DH+ + G +++L L+ LVLDEAD +L +GF D+E
Sbjct: 116 QQLNALKRGP-QVIVGTPGRVMDHM--RRG-TLKLETLQALVLDEADEMLKMGFIDDIEW 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPV-KIKQSCL-VA 615
I++ P +RQ LFSATMP++++R++ LK + + + T V I+Q + V+
Sbjct: 172 ILEHTPPQRQLALFSATMPEQIKRVANKHLKNA----TNISIAASHTTVDSIEQRFVQVS 227
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
H ++ L E+ G +I+F T L L ++ Q
Sbjct: 228 QHNKLEALVRVLEVENTEG-----IIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQA 282
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+R E+ + K IL+ +DV+ARG+D + VV IP D E Y+H
Sbjct: 283 RERAVEQLKNGKLDILIATDVAARGLDVERIGHVVNYDIPYDTEAYVH 330
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 406 (148.0 bits), Expect = 4.1e-37, P = 4.1e-37
Identities = 118/371 (31%), Positives = 179/371 (48%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ +SP + L + GY QMT +Q +L L+G D + +AKTG+GK+ AF + +
Sbjct: 8 FNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNP 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ L++CPTRELA Q+A E L + D I VLTL GG F
Sbjct: 68 INPRYFGCQA--------LVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQI 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
LE I+V TPGR+ H+ + G S+ L GL LVLDEAD +LD+GF +E+I++
Sbjct: 120 ASLEHG-AHIIVGTPGRIQQHL--RKG-SLVLDGLNTLVLDEADRMLDMGFYDAIEDIIE 175
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHEL 619
P RRQ+LLFSAT P +++++ ++ T V + +I+Q ++P E
Sbjct: 176 KTPSRRQTLLFSATYPVGIKQLASKFMRDPQT----VKAEAFHDDTQIEQRFYEISPEER 231
Query: 620 HF---QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
++LHH P + FC T L ++ ++ Q R
Sbjct: 232 MSAVTKVLHHF-------RPA-SCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDR 283
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
D++ F +LV +DV+ARG+D + V+ V + D E +IH
Sbjct: 284 DQVLAMFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGI 343
Query: 737 XVLLLAPWEEY 747
V L+AP E +
Sbjct: 344 AVSLVAPSEAH 354
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 426 (155.0 bits), Expect = 4.7e-37, P = 4.7e-37
Identities = 108/350 (30%), Positives = 194/350 (55%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+ F+ +S +K L + GY++ + +Q AT+ L GKD + A TG+GK+ AF++P I
Sbjct: 231 ENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPII 290
Query: 439 EAVL-KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
E +L K ++T+ V++L PTRELA Q+A + + GI VGG +
Sbjct: 291 ERLLYKPAKIASTR------VIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLR 344
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
++ L+S P I++ATPGR +DHI N + +V +++LV+DEAD +L+ GF+ ++
Sbjct: 345 QQEQMLKSRP-DIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADRMLEEGFQDELNE 401
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSVETPVKIKQSCLVAP 616
I+ LP RQ+LLFSATM +++ + L LK+ ID + K+ Q +
Sbjct: 402 IMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDP----PKKAATKLTQEFVRIR 457
Query: 617 HELHFQ--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
H + +L +L+++ + T +++VF + L +++ + M+V E++ Q
Sbjct: 458 KRDHLKPALLFNLIRK-LDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQE 516
Query: 675 YR-DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R D +++ F+ + +L+ +D+++RG+D P + V+ +P E Y+H
Sbjct: 517 QRLDSVNK-FKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLH 565
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 423 (154.0 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 124/361 (34%), Positives = 189/361 (52%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+ F+E G P ++ + +GY + T VQ+ ++ L +D + A+TG+GK+ AFLLP I
Sbjct: 139 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 198
Query: 439 EAVLKATSSSTTQLVPPIYV----------LILCPTRELASQIAAEAIALLKNHDGIGVL 488
+ +L + + PP + L+L PTRELA QI EA I
Sbjct: 199 QHIL---AGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTA 254
Query: 489 TLVGGTRFKVDQ-RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
L GG DQ RL + IL+ATPGRL+D IE G + L G + LVLDEAD +L
Sbjct: 255 ILYGGRENYRDQVNRLRAGT-HILIATPGRLIDIIEQ--GF-IGLAGCRYLVLDEADRML 310
Query: 548 DLGFRKDVENIV-DCLPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVET 604
D+GF + IV +P + R + +FSAT PKE++ +++ LK + ++ +GS T
Sbjct: 311 DMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGS--T 368
Query: 605 PVKIKQSCL-VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKM 662
I+Q L V E ++ L+ EH + V+VF T L Y L R+
Sbjct: 369 SENIEQRLLWVNEMEKRSNLMEILMNEH----SENLVLVFVETKRGANELAYFLNRQQIR 424
Query: 663 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 722
+V ++ Q+ R+R E FR+ + ILV + V+ARG+D P+V V+ +P D ++Y+
Sbjct: 425 SV-SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYV 483
Query: 723 H 723
H
Sbjct: 484 H 484
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 404 (147.3 bits), Expect = 6.8e-37, P = 6.8e-37
Identities = 114/355 (32%), Positives = 190/355 (53%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P+L+ F+E + K ++ GY ++T VQ+ ++ G+D + A+TG+GK+ AF
Sbjct: 165 PLLA---FEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAF 221
Query: 434 LLPAIEAVLK-ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
LLP ++ ++K ++S Q +I+ PTREL +QI EA + I + + G
Sbjct: 222 LLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYG-TCIRPVVIYG 280
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GT+ R++ C IL ATPGRLLD IE K +S L+ +K LVLDEAD +LD+GF
Sbjct: 281 GTQTGHSIRQIMQG-CNILCATPGRLLDIIE-KGKIS--LVEVKYLVLDEADRMLDMGFG 336
Query: 553 KDVENIVDC--LPR--RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKI 608
D++ ++ +P RRQ+L+FSAT P+EV+R++ LK ++ ++ +G + +
Sbjct: 337 LDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFL-VIG-NTCGACSDV 394
Query: 609 KQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMY 668
+Q+ L P L +L+ T + +VF T L L + + ++
Sbjct: 395 QQNILQVPRLSKRDKLIEILQS----TGGERTMVFVDTKKKADYLAAFLCQENLPSTSIH 450
Query: 669 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ Q R+ +FR+ K ILV + V++RG+D +V V+ +P E Y+H
Sbjct: 451 GDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVH 505
>ZFIN|ZDB-GENE-021212-1 [details] [associations]
symbol:ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
55" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021212-1 GO:GO:0007275 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AF506203 EMBL:BC059534 IPI:IPI00493927 RefSeq:NP_775336.1
UniGene:Dr.16883 ProteinModelPortal:Q8JHJ2 STRING:Q8JHJ2
GeneID:286745 KEGG:dre:286745 InParanoid:Q8JHJ2 NextBio:20806420
ArrayExpress:Q8JHJ2 Uniprot:Q8JHJ2
Length = 593
Score = 416 (151.5 bits), Expect = 9.7e-37, P = 9.7e-37
Identities = 117/366 (31%), Positives = 180/366 (49%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++ L G+ MT VQ A + + KD +A TG+GK++AF++PA+E +LK
Sbjct: 21 LQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKLKK 80
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
V LI+ PTRELA QI+ L+ + L+GG+ D +L++ I
Sbjct: 81 MQVG---ALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANI 137
Query: 511 LVATPGRLLDHIENKSG---LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
++ATPGRL D K+ L+ + L +LVLDEAD LLD+GF + I+ LP++R+
Sbjct: 138 IIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRR 197
Query: 568 SLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLG--SVE-TPVKIKQSCLVAPHELHFQI 623
+ LFSAT +E+ ++ + L+ + G+ SV+ TP K+ + E F
Sbjct: 198 TGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPAKLSNYYTMCRAEEKFNT 257
Query: 624 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR-EMYSRKPQLYRDRISEE 682
L L++H K +VF ST L + NV K + R++I +
Sbjct: 258 LVAFLRQH----KHEKQLVFFSTCACVEYFGKALEVLVKNVSIHCIHGKMKHKRNKIFAD 313
Query: 683 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLA 742
FRA K ILV +DV ARG+D P+V V+Q P ++H ++ L
Sbjct: 314 FRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLL 373
Query: 743 PWEEYF 748
P EE +
Sbjct: 374 PMEESY 379
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 402 (146.6 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 112/346 (32%), Positives = 177/346 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + +++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFNMKK--IQFLVMDEADRLLEQGCTDFTTDLET 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I+ +P RRQ+LLFSAT+ ++ + L + +V T ++ Q L+ P
Sbjct: 172 ILAAVPARRQTLLFSATLTDTLKELQGLATNEPFFW---EAQATVRTVEQLDQRYLLVPE 228
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
++ L HL++ D +I+F +T +L ++LR+ ++S Q R
Sbjct: 229 KVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERF 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 289 AALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 420 (152.9 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 111/350 (31%), Positives = 190/350 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 264 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 323
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 324 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 381
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 382 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 437
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+LLFSAT P+E++R++ LK + + V +G V + ++QS L
Sbjct: 438 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLF---VAVGQVGGACRDVQQSIL 494
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 495 QVGQYSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 550
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 551 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 600
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 401 (146.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 114/367 (31%), Positives = 179/367 (48%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S +KA+ G+ + T +Q T+ L KD + +A+TGTGK+ AF +P +E
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE- 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K S P I +++ PTRELA Q++ E + ++ VL + GG
Sbjct: 64 --KINPES-----PNIQAIVIAPTRELAIQVSEELYKIGQDKRA-KVLPIYGGQDIGRQI 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ +P I+V TPGRLLDHI ++ +RL + +V+DEAD +L++GF D+E+I+
Sbjct: 116 RALKKNP-NIIVGTPGRLLDHINRRT---IRLNNVNTVVMDEADEMLNMGFIDDIESILS 171
Query: 561 CLPRRRQSLLFSATMPKEVRRISQ-LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+P Q+LLFSATMP ++RI++ + + EH + + T I+Q L
Sbjct: 172 NVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEM----TVSNIQQFYLEVQERK 227
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
F L LL + +P+ IVF T L L ++ Q R
Sbjct: 228 KFDTLTRLLD---IQSPEL-AIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVA 283
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 739
+F+ +LV +DV+ARG+D VT V +P D E Y+H +
Sbjct: 284 LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMT 343
Query: 740 LLAPWEE 746
+ P E+
Sbjct: 344 FITPREK 350
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 401 (146.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 112/346 (32%), Positives = 176/346 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVTQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + +++ ++ LVLDEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFNMKK--IRFLVLDEADRLLEQGCTDFTADLET 171
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
I+ +P RRQ+LLFSAT+ ++ + L + + +V T ++ Q L+ P
Sbjct: 172 ILSAVPARRQTLLFSATLTDTLKELQGLATNQPFFW---EAQATVRTVEQLDQRYLLVPE 228
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
++ L HL++ D +I+F +T +L ++LR+ ++S Q R
Sbjct: 229 KVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERF 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 289 AALARFKSSTYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 409 (149.0 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 109/350 (31%), Positives = 189/350 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 291 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 350
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 351 MMHDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQLGY 408
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I K + +R + K LVLDEAD +LD+GF +++ +
Sbjct: 409 SIRQIVQG-CNILCATPGRLMDII-GKEKIGLRQV--KYLVLDEADRMLDMGFGPEMKKL 464
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+L+FSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 465 ISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLF---VAVGQVGGACRDVQQTIL 521
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 522 QVGQYSKREKLVEILRS--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 577
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 578 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 627
Score = 57 (25.1 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 49/197 (24%), Positives = 70/197 (35%)
Query: 83 DPDSETNQHKPMSPDEHVKALA-DRFMKEGAEDLWNE--------DDGPVKSEQRPRSGA 133
D D E KP P +V DR+ D +N +DGP + + R G
Sbjct: 3 DEDWEAEIIKPHMPS-YVPVFEKDRYSSGANGDTFNRTTASSSEMNDGPSRRDHFMRGGF 61
Query: 134 EANQRPRLAGAPIDLRGL-ISDKRXXXXXXXXXXXXXXXKTRNYSVLSESKFSDRSKSAS 192
L+G + R S+KR R +S +KF + S+
Sbjct: 62 -------LSGRSMGNRDAGESNKRENTSTMGGFGVGKSFGNRGFS----NKFEE-GDSSG 109
Query: 193 LIFMPNLECNDGETVIPSRNVMDFVRRAYFS-GTDKR--NFCRNDG-SSTRD-KAGFDTG 247
N +C D +T RN F +R F G D R G S R + GF G
Sbjct: 110 FWRESNNDCEDNQT----RN-RGFSKRGGFQDGNDSEASGSSRRGGRGSFRGCRGGFGLG 164
Query: 248 NKAKPFARNLGNNRENG 264
N + + ++ G R G
Sbjct: 165 NPNREYEQDEGTQRTGG 181
>UNIPROTKB|Q5ZLN8 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AJ719696 IPI:IPI00590534 RefSeq:NP_001006185.1
UniGene:Gga.42731 ProteinModelPortal:Q5ZLN8 STRING:Q5ZLN8
PRIDE:Q5ZLN8 GeneID:416820 KEGG:gga:416820 InParanoid:Q5ZLN8
NextBio:20820225 Uniprot:Q5ZLN8
Length = 591
Score = 414 (150.8 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 117/371 (31%), Positives = 182/371 (49%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+SP ++AL G+ +MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LSPGVLRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K+ + L+GG D + +
Sbjct: 76 EKLKKMQVGAI---IITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I+ L
Sbjct: 133 HGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATNTQKTPTRLENYYMICKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 677
F L H L++H K +VF ST L + V+ M K + R+
Sbjct: 253 EKFNQLVHFLRQH----KQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKHKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 399 (145.5 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 115/337 (34%), Positives = 179/337 (53%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++ L++ GY +MT +Q +L A L G+D + + KTG+GK+ AF L +L
Sbjct: 13 LENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGL----GLLNKLDVKRF 68
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
+ I L+LCPTRELA Q+A E L + + VLTL GG LE I
Sbjct: 69 R----IQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG-AHI 123
Query: 511 LVATPGRLLDHIE-NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
+V TPGR++DH++ N+ LS L MLVLDEAD +L++GF+ ++ I++ PR RQ+L
Sbjct: 124 IVGTPGRIVDHLDRNRLDLS----NLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTL 179
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK--IKQSCL-VAPHELHFQILHH 626
LFSAT P++++ I++ ++ Y + V + + T K I+Q + + Q L
Sbjct: 180 LFSATFPEQIQSIAKQIM-----Y-NPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQL 233
Query: 627 LLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRAS 686
LL EH P+ +VFC+T T + L + +V ++ Q RD +F
Sbjct: 234 LLLEH---KPE-SAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANK 289
Query: 687 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+LV +DV+ARG+D + +V + D E +IH
Sbjct: 290 SACVLVATDVAARGLDIDALDAVFNYHVAYDTEVHIH 326
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 399 (145.5 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 115/350 (32%), Positives = 182/350 (52%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS ++F + + P +AL G+ T +Q +L L+ KD +A+TGTGK++AFL+
Sbjct: 6 LSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ QL P +I+ PTRELA QIA +AI L K H + V + GG
Sbjct: 66 ATFNHLLSSSIPEGRQLNQP-RAIIMAPTRELAIQIAKDAILLAK-HTRLKVGIVYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ V QR++ IL+ T GR++D++ + G+ + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDV-QRKVLDQGVDILIGTTGRIIDYV--RQGI-INLNAIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLPR--RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL 613
+ +P +R ++LFSAT+ +V+ +L + + +T IK+
Sbjct: 180 RFLFRRMPNADQRLNMLFSATLSMKVQ---ELAYDHMNDPVKVEIAPEEKTSKNIKEEIF 236
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
E ++L L++E P+ K IVF +T L+ L V + PQ
Sbjct: 237 YPSQEDKMRLLLTLIEED---WPE-KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQ 292
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R RI E+F + ILV +DV+ARG+ DV+ V +P D E Y+H
Sbjct: 293 KKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVH 342
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 399 (145.5 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 115/350 (32%), Positives = 182/350 (52%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS ++F + + P +AL G+ T +Q +L L+ KD +A+TGTGK++AFL+
Sbjct: 6 LSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ QL P +I+ PTRELA QIA +AI L K H + V + GG
Sbjct: 66 ATFNHLLSSSIPEGRQLNQP-RAIIMAPTRELAIQIAKDAILLAK-HTRLKVGIVYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ V QR++ IL+ T GR++D++ + G+ + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDV-QRKVLDQGVDILIGTTGRIIDYV--RQGI-INLNAIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLPR--RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL 613
+ +P +R ++LFSAT+ +V+ +L + + +T IK+
Sbjct: 180 RFLFRRMPNADQRLNMLFSATLSMKVQ---ELAYDHMNDPVKVEIAPEEKTSKNIKEEIF 236
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
E ++L L++E P+ K IVF +T L+ L V + PQ
Sbjct: 237 YPSQEDKMRLLLTLIEED---WPE-KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQ 292
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R RI E+F + ILV +DV+ARG+ DV+ V +P D E Y+H
Sbjct: 293 KKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVH 342
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 399 (145.5 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 115/337 (34%), Positives = 179/337 (53%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++ L++ GY +MT +Q +L A L G+D + + KTG+GK+ AF L +L
Sbjct: 13 LENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGL----GLLNKLDVKRF 68
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
+ I L+LCPTRELA Q+A E L + + VLTL GG LE I
Sbjct: 69 R----IQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG-AHI 123
Query: 511 LVATPGRLLDHIE-NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
+V TPGR++DH++ N+ LS L MLVLDEAD +L++GF+ ++ I++ PR RQ+L
Sbjct: 124 IVGTPGRIVDHLDRNRLDLS----NLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTL 179
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK--IKQSCL-VAPHELHFQILHH 626
LFSAT P++++ I++ ++ Y + V + + T K I+Q + + Q L
Sbjct: 180 LFSATFPEQIQSIAKQIM-----Y-NPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQL 233
Query: 627 LLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRAS 686
LL EH P+ +VFC+T T + L + +V ++ Q RD +F
Sbjct: 234 LLLEH---KPE-SAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANK 289
Query: 687 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+LV +DV+ARG+D + +V + D E +IH
Sbjct: 290 SACVLVATDVAARGLDIDALDAVFNYHVAYDTEVHIH 326
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 386 (140.9 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 115/352 (32%), Positives = 185/352 (52%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P+LS FD + +I+A + + + T +Q L GKD V A+TG+GK+ AF
Sbjct: 112 PLLS---FDYLSLDS-SIQA-EISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAF 166
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+PAI ++ Q I VL++ PTRELASQI I +L + G+ + GG
Sbjct: 167 GVPAISHLMN------DQKKRGIQVLVISPTRELASQIYDNLI-VLTDKVGMQCCCVYGG 219
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
D++R++ Q++VATPGRLLD ++ G SV L + LVLDEAD +L+ GF +
Sbjct: 220 V--PKDEQRIQLKKSQVVVATPGRLLDLLQE--G-SVDLSQVNYLVLDEADRMLEKGFEE 274
Query: 554 DVENIV-DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC 612
D++NI+ + +RQ+L+F+AT PKEVR ++ + + + +I Q
Sbjct: 275 DIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNP-IKVSIGNTDQLTANKRITQIV 333
Query: 613 -LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 671
+V P ++L L K H + KV++F + + L+ NV ++
Sbjct: 334 EVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDL 393
Query: 672 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R + EF++ K +L+ +DV+ARG+D P+V +V+ + P E Y+H
Sbjct: 394 SQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVH 445
Score = 37 (18.1 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 314 KKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKE 354
KK K D K K K + E E++VE+ KE
Sbjct: 21 KKKSKKHKKDKKDKKEKKDKKHKKHKKEKKGEKEVEVPEKE 61
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 415 (151.1 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 119/345 (34%), Positives = 177/345 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ ++AL GY + + +Q + L G+D + A+TG+GK+ AF LP ++
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ +L P +L+L PTRELA Q+A K+ G+ V+ L GG R+ V
Sbjct: 68 L-------DPELKAP-QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L P QI+V TPGRLLDH+ K G ++ L L LVLDEAD +L +GF +DVE I+
Sbjct: 120 RALRQGP-QIVVGTPGRLLDHL--KRG-TLDLSKLSGLVLDEADEMLRMGFIEDVETIMA 175
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKR-EHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+P Q+ LFSATMP+ +RRI++ +K + I + SV T I QS
Sbjct: 176 QIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQS----SVTTRPDISQSYWTVWGMR 231
Query: 620 HFQILHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+ L L+ D+ I+F T T + L N + Q R++
Sbjct: 232 KNEALVRFLEAE-----DFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQ 286
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
E + + IL+ +DV+ARG+D ++ VV IP D E Y+H
Sbjct: 287 TLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVH 331
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 418 (152.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 111/350 (31%), Positives = 190/350 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 275 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 334
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 335 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 392
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 393 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 448
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+LLFSAT P+E++R++ LK + + V +G V + ++QS L
Sbjct: 449 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLF---VAVGQVGGACRDVQQSIL 505
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 506 QVGPVFKKRKLVEILRN--IG--DERPMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 561
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 562 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVH 611
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 418 (152.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 111/350 (31%), Positives = 190/350 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 275 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 334
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 335 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 392
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 393 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 448
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+LLFSAT P+E++R++ LK + + V +G V + ++QS L
Sbjct: 449 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLF---VAVGQVGGACRDVQQSIL 505
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 506 QVGPVFKKRKLVEILRN--IG--DERPMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 561
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 562 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVH 611
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 398 (145.2 bits), Expect = 3.1e-36, P = 3.1e-36
Identities = 106/345 (30%), Positives = 178/345 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+S +KA+ GY + +Q + A + G+D + A+TGTGK+ F LP ++
Sbjct: 7 KFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQ 66
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + + + + LIL PTRELA+QI+ E+I + + + + + GG +
Sbjct: 67 RLSSSKGNKVSS--NNVRALILTPTRELAAQIS-ESIEVYGKYLNLHSMVVFGGVKINPQ 123
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
RL +LVATPGRLLD + N+ +V+ L++ +LDEAD +LD+GF +D++ ++
Sbjct: 124 IARLRQG-VDVLVATPGRLLD-LYNQR--AVKFSQLEVFILDEADRMLDMGFIRDIKKLM 179
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQ-LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
LP+ RQ+LLFSAT E+R +++ +V +D T K+ Q +
Sbjct: 180 TALPKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAEN----STAEKVTQWLTAVDKK 235
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+L HL+KE+ +V+VF T + L L + ++ K Q R +
Sbjct: 236 RKPAVLTHLIKENNW----QQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTK 291
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
F+ ILV +D++ARG+D + VV +P E Y+H
Sbjct: 292 ALAAFKDGSVKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVH 336
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 417 (151.9 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 110/350 (31%), Positives = 190/350 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 263 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 322
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 323 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 380
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 381 SVRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 436
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+LLFSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 437 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLF---VAVGQVGGACRDVQQTIL 493
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 494 QVGQYSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 549
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 550 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 599
>UNIPROTKB|Q8NHQ9 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
OMA:CACVEYW EMBL:AC055713 EMBL:AC117503 EMBL:BC030020 EMBL:AL833756
EMBL:AB046815 IPI:IPI00185361 RefSeq:NP_065987.1 UniGene:Hs.286173
ProteinModelPortal:Q8NHQ9 SMR:Q8NHQ9 STRING:Q8NHQ9
PhosphoSite:Q8NHQ9 DMDM:296439376 PaxDb:Q8NHQ9 PRIDE:Q8NHQ9
Ensembl:ENST00000238146 GeneID:57696 KEGG:hsa:57696 UCSC:uc001ufi.3
GeneCards:GC12P124086 HGNC:HGNC:20085 neXtProt:NX_Q8NHQ9
PharmGKB:PA134984021 InParanoid:Q8NHQ9 ChiTaRS:DDX55
GenomeRNAi:57696 NextBio:64547 ArrayExpress:Q8NHQ9 Bgee:Q8NHQ9
CleanEx:HS_DDX55 Genevestigator:Q8NHQ9 GermOnline:ENSG00000111364
Uniprot:Q8NHQ9
Length = 600
Score = 412 (150.1 bits), Expect = 3.7e-36, P = 3.7e-36
Identities = 117/371 (31%), Positives = 179/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K+ + +GG D R +
Sbjct: 76 EKLKKSQVGAI---IITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQ 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 QGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 677
F L H L+ H K +VF ST L + V+ M Y R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>RGD|2324094 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:2324094
GO:GO:0005524 GO:GO:0003723 EMBL:CH473973 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 CTD:57696 KO:K14809
OrthoDB:EOG4WH8KN GeneTree:ENSGT00550000074969 IPI:IPI00370890
RefSeq:NP_001258255.1 UniGene:Rn.209289 Ensembl:ENSRNOT00000001387
GeneID:100362764 KEGG:rno:100362764 UCSC:RGD:2324094 Uniprot:D3ZX56
Length = 600
Score = 412 (150.1 bits), Expect = 3.7e-36, P = 3.7e-36
Identities = 114/371 (30%), Positives = 180/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ PL + AL G++ MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I ++ PTRELA QI K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---VITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQ 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 HGGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMICKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 677
F L H L+ K +VF ST L + V+ + Y R+
Sbjct: 253 EKFNQLVHFLRSR----QQEKHLVFFSTCACVEYYGKALEALVQRVKILCIHGKMKYKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEEAY 379
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 397 (144.8 bits), Expect = 3.9e-36, P = 3.9e-36
Identities = 116/361 (32%), Positives = 177/361 (49%)
Query: 387 SPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATS 446
S LT KA+ G+ + T +Q T+ L KD + +A+TGTGK+ AF +P +E K
Sbjct: 12 SDLT-KAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE---KINP 67
Query: 447 SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESD 506
S P I +++ PTRELA Q++ E + ++ VL + GG R L+ +
Sbjct: 68 ES-----PNIQAIVIAPTRELAIQVSEELYKIGQDKRA-RVLPIYGGQDIGRQIRALKKN 121
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
P I+V TPGRLLDHI ++ +RL + +VLDEAD +L++GF +D+E+I+ +P
Sbjct: 122 P-HIIVGTPGRLLDHINRRT---MRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEH 177
Query: 567 QSLLFSATMPKEVRRISQLVLKR-EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 625
Q+LLFSATMP ++RI++ + EH + + T I+Q L F L
Sbjct: 178 QTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEM----TVSNIQQFYLEVHERKKFDTLT 233
Query: 626 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 685
LL + +P+ IVF T L L ++ Q R +F+
Sbjct: 234 RLLD---IQSPEL-AIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQ 289
Query: 686 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 745
+LV +DV+ARG+D VT V +P D E Y+H + + P E
Sbjct: 290 GAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPRE 349
Query: 746 E 746
+
Sbjct: 350 K 350
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 418 (152.2 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 114/347 (32%), Positives = 179/347 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E +S +KA+ G+ Q T +Q + L GKD + A TG+GK+ AFLLP +E
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S I VLIL PTRELA Q + + L I +VGG K +
Sbjct: 252 LLFRDSEYRA-----IRVLILLPTRELALQCQS-VMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P +++ATPGRL+DH+ N G+ L L++L+LDEAD LLD+GF+ ++ IV+
Sbjct: 306 VELRKSP-DVVIATPGRLIDHLLNAHGIG--LDDLEILILDEADRLLDMGFKDEINKIVE 362
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVG--LGSVETP-VKIKQSCLVAP 616
P RQ++LFSAT+ EV+ +++L L++ +D + ++E VKIK L
Sbjct: 363 SCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQHLSDR 422
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ + + + GT I+FC + L ++ + E++ Q R
Sbjct: 423 PAILLSLCTRVFNQG--GT-----IIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQR 475
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
++FR + L+ SDV++RG+D V +V+ +P + YIH
Sbjct: 476 FDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIH 522
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 422 (153.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 118/348 (33%), Positives = 186/348 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ + P + + +AG+ + +Q + ++ +D V AKTG+GK++ +L+P
Sbjct: 231 FNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH 290
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + S ++ P I L+L PTRELA+QI EA+ K+ I L GG
Sbjct: 291 LQRIHNDS--RMGPTI--LVLSPTRELATQIQVEALKFGKSSK-ISCACLYGGAPKGPQL 345
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ +E I+VATPGRL D +E K + L + LVLDEAD +LD+GF + IV+
Sbjct: 346 KEIERG-VDIVVATPGRLNDILEMKR---ISLHQVSYLVLDEADRMLDMGFEPQIRKIVN 401
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPV---KIKQSC-LVAP 616
+P +RQ+L+++AT PKEVR+I+ +L V +G+V+ V I Q+ ++AP
Sbjct: 402 EVPTKRQTLMYTATWPKEVRKIAADLLVNPAQ----VNIGNVDELVANKSITQTIEVLAP 457
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTG-MVTSLLYLLLREMKMNVREMYSRKPQLY 675
E H + L +L+ P K+I+FCST M L L R ++ K Q
Sbjct: 458 MEKHSR-LEQILRSQ---EPGSKIIIFCSTKRMCDQLARNLTRTF--GAAAIHGDKSQAE 511
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
RD + +FR+ + +LV +DV+ARG+D D+ VV P E Y+H
Sbjct: 512 RDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVH 559
Score = 37 (18.1 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 223 SGTDKRNFCR-NDGSSTRDKAGFDTGNKAKPFARN-----LGNNRENGDS 266
SG + + R +DG + + F+ + P + N LGN G S
Sbjct: 76 SGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLGNASSGGSS 125
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 396 (144.5 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 108/344 (31%), Positives = 174/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+S ++A+ GY++ T VQ + L+ +D +V A+TGTGK+ F LP ++
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + P I LIL PTRELA Q+ E + + + + GG K
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVF-ECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L ILVATPGRLLD + N+ L+ L ++ VLDEAD +LD+GF D+ I+
Sbjct: 131 NHLRRG-VDILVATPGRLLDLV-NQGVLN--LSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP RQ+LLFSAT KE++ ++ +L I+ + + + +V H +
Sbjct: 187 LLPESRQNLLFSATFSKEIKELTDKLL-HSPALIEVARRNTAAARI----THVV--HPVD 239
Query: 621 FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
Q LL ++G+ +++ V+VF T + L L ++ ++ K Q R R
Sbjct: 240 RQRKRELLS-FMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRA 298
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+ K +LV +DV+ARG+D + V+ +P + Y+H
Sbjct: 299 LTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVH 342
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 396 (144.5 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 103/343 (30%), Positives = 179/343 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ +KA+T GY T +Q + + L GK+ + A+TGTGK+ +F+LP +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
A + + +IL PTRELA Q+ + I + + + + GG +
Sbjct: 63 FADAPKIRPKR----VRSIILTPTRELALQVE-QNINQYAKYLPLTAMAMYGGVDAAPQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL + +LVATPGRLLD ++ +R + +LVLDEAD +LD+GF +D+ NI++
Sbjct: 118 KRL-IEGVDLLVATPGRLLDMYTQRA---IRFDEVSVLVLDEADRMLDMGFIEDINNIIE 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP +RQ+LLFSAT+ K+V+ +++ + + I+ + T +I Q +
Sbjct: 174 KLPEQRQNLLFSATLSKQVKALAKTAIP-DAIEIEISRKNAAST--QIDQWLTTVDKDRK 230
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
+L HL+KE+ + ++F T + L L + + +S + Q R+++
Sbjct: 231 SALLSHLIKENNWA----QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLL 286
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A K LV + V +RG+D + V+ +P + + YIH
Sbjct: 287 IDFKAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIH 329
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 396 (144.5 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 108/344 (31%), Positives = 174/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+S ++A+ GY++ T VQ + L+ +D +V A+TGTGK+ F LP ++
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + P I LIL PTRELA Q+ E + + + + GG K
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVF-ECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L ILVATPGRLLD + N+ L+ L ++ VLDEAD +LD+GF D+ I+
Sbjct: 131 NHLRRG-VDILVATPGRLLDLV-NQGVLN--LSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP RQ+LLFSAT KE++ ++ +L I+ + + + +V H +
Sbjct: 187 LLPESRQNLLFSATFSKEIKELTDKLL-HSPALIEVARRNTAAARI----THVV--HPVD 239
Query: 621 FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
Q LL ++G+ +++ V+VF T + L L ++ ++ K Q R R
Sbjct: 240 RQRKRELLS-FMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRA 298
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+ K +LV +DV+ARG+D + V+ +P + Y+H
Sbjct: 299 LTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVH 342
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 396 (144.5 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 103/343 (30%), Positives = 179/343 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ +KA+T GY T +Q + + L GK+ + A+TGTGK+ +F+LP +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
A + + +IL PTRELA Q+ + I + + + + GG +
Sbjct: 63 FADAPKIRPKR----VRSIILTPTRELALQVE-QNINQYAKYLPLTAMAMYGGVDAAPQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL + +LVATPGRLLD ++ +R + +LVLDEAD +LD+GF +D+ NI++
Sbjct: 118 KRL-IEGVDLLVATPGRLLDMYTQRA---IRFDEVSVLVLDEADRMLDMGFIEDINNIIE 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP +RQ+LLFSAT+ K+V+ +++ + + I+ + T +I Q +
Sbjct: 174 KLPEQRQNLLFSATLSKQVKALAKTAIP-DAIEIEISRKNAAST--QIDQWLTTVDKDRK 230
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
+L HL+KE+ + ++F T + L L + + +S + Q R+++
Sbjct: 231 SALLSHLIKENNWA----QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLL 286
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+A K LV + V +RG+D + V+ +P + + YIH
Sbjct: 287 IDFKAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIH 329
>UNIPROTKB|F1NJA0 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969 IPI:IPI00590534
OMA:CACVEYW EMBL:AADN02034882 Ensembl:ENSGALT00000005224
Uniprot:F1NJA0
Length = 591
Score = 410 (149.4 bits), Expect = 5.3e-36, P = 5.3e-36
Identities = 117/371 (31%), Positives = 181/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+SP + AL G+ +MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LSPGVLLALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K+ + L+GG D + +
Sbjct: 76 EKLKKMQVGAI---IITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I+ L
Sbjct: 133 HGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATNTQKTPTRLENYYMICKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 677
F L H L++H K +VF ST L + V+ M K + R+
Sbjct: 253 EKFNQLVHFLRQH----KQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKHKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 416 (151.5 bits), Expect = 6.4e-36, P = 6.4e-36
Identities = 111/348 (31%), Positives = 180/348 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +S +K L+ G+ T++Q+ T+ L GKD V A TG+GK+ AF++P +E
Sbjct: 261 FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILER 320
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L VP VLILCPTRELA Q + A + D I V +GG K+ +
Sbjct: 321 LLYRPKK-----VPTTRVLILCPTRELAMQCHSVATKIASFTD-IMVCLCIGGLSLKLQE 374
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L P I++ATPGR +DH+ N G +V ++++V+DEAD +L+ GF ++ I+
Sbjct: 375 QELRKRP-DIVIATPGRFIDHMRNSQGFTVE--NIEIMVMDEADRMLEDGFADELNEIIQ 431
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSVETPVKI--KQSCLVAPH 617
P+ RQ++LFSATM +V + +L L R ++D + +T K+ ++ V P
Sbjct: 432 ACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVD-----NKKTTAKLLTQEFVRVRPQ 486
Query: 618 E--LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
L +L +L KE + I+F + + ++ + +N E++ Q
Sbjct: 487 RELLRPAMLIYLCKELF----HRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQ 542
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R R E+FR K L+ +DV++RG+D + V+ P E Y+H
Sbjct: 543 RVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLH 590
>ASPGD|ASPL0000072637 [details] [associations]
symbol:AN4903 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BN001303 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000084 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 RefSeq:XP_662507.1 ProteinModelPortal:Q5B3H7
EnsemblFungi:CADANIAT00005498 GeneID:2872706 KEGG:ani:AN4903.2
HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW Uniprot:Q5B3H7
Length = 525
Score = 395 (144.1 bits), Expect = 6.5e-36, P = 6.5e-36
Identities = 117/357 (32%), Positives = 179/357 (50%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+ F ++P + +LT + T +Q A + L+G+D + ++TG+GK+IAF +P
Sbjct: 94 ENSFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPI 153
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
++ + I+ +IL PTRELA QI E I + + + + GGT +
Sbjct: 154 LQKWAEDPFG--------IFAVILTPTRELALQIF-EQIKAISAPQSMKPVLITGGTDMR 204
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK---MLVLDEADHLLDLG---F 551
L P ++VATPGRL DHI N SG + GLK M+VLDEAD LL G
Sbjct: 205 SQAIELAGRP-HVVVATPGRLADHI-NTSGTDT-VAGLKRVRMVVLDEADRLLSPGPGSM 261
Query: 552 RKDVENIVDCLP--RRRQSLLFSATMPKEVRRISQLVLK--REHTYIDTVGLGSVET-PV 606
DVE + LP +RQ+LLF+AT+ EVR + + + ++ + + +T P
Sbjct: 262 LPDVETCLSFLPGPSQRQTLLFTATLTPEVRALKSMPQTPGKPPIFVTEISTEAKDTVPP 321
Query: 607 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 666
++ + + P LH LL T IVF +T LL LLR + V
Sbjct: 322 TLRTTYVQVPLTHREAFLHVLLSTESNITKS--AIVFTNTTKSADLLERLLRSLGHRVTS 379
Query: 667 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
++S PQ R+ FRAS +LV +DV++RG+D P V+ VV +P + + Y+H
Sbjct: 380 LHSLLPQSERNSNLARFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVH 436
>TIGR_CMR|CPS_0174 [details] [associations]
symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
Length = 428
Score = 395 (144.1 bits), Expect = 6.5e-36, P = 6.5e-36
Identities = 113/350 (32%), Positives = 183/350 (52%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L++ +F + ++P + L A G+ T +Q +L L+G D +A+TG GK+IAFL
Sbjct: 6 LTETKFADLNLAPQVVTGLEAMGFDYCTSIQAKSLPVLLQGTDLAGQAQTGEGKTIAFLA 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L+ + + Q P LI+ PTRELA QI +A + K+ G+ + + GG
Sbjct: 66 ATFHHLLQKEAPTHNQ---P-RALIMAPTRELAIQIHRDATEMAKS-TGLRLGVVYGGEG 120
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++ + LE+ IL+ T GRL+D++ K G+ L ++++VLDEAD + DLGF KD+
Sbjct: 121 YESQRLELEAG-VDILIGTCGRLIDYM--KQGI-YNLKNIEVIVLDEADRMFDLGFIKDI 176
Query: 556 ENIVDCLP--RRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL 613
+ D +P R S+LFSAT+ V+ ++ + T ++ +T +I +
Sbjct: 177 RYMFDKMPPATERLSMLFSATLSFRVKELA-FDHMNDPTSVEVEP--EQKTNSRISEELF 233
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+E +L L++E P+ K IVF +T V ++ L K+ V + PQ
Sbjct: 234 YPSNEDKMTLLQTLIEED---WPE-KAIVFANTKHVCEKVFDHLNADKIRVGLLTGDVPQ 289
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R +I EEF ILV +DV+ARG+ P VT V +P D + Y+H
Sbjct: 290 KKRLKILEEFTDGTVDILVATDVAARGLHIPSVTHVFNYDLPDDCQDYVH 339
>UNIPROTKB|F8WAJ0 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AL160165 HGNC:HGNC:16715
IPI:IPI01010837 ProteinModelPortal:F8WAJ0 SMR:F8WAJ0
Ensembl:ENST00000438527 ArrayExpress:F8WAJ0 Bgee:F8WAJ0
Uniprot:F8WAJ0
Length = 722
Score = 339 (124.4 bits), Expect = 7.3e-36, Sum P(3) = 7.3e-36
Identities = 95/283 (33%), Positives = 150/283 (53%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ + F E G+ P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 97 VFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 156
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A S + P Y L+L PTRELA Q LLK I L+GG
Sbjct: 157 CIPVVQS-LQAMESKIQRSDGP-YALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 214
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ L+ LV DEAD +LDLGF K
Sbjct: 215 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFSRLRWLVFDEADRILDLGFEK 271
Query: 554 DVE---NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQ 610
D+ N V+ ++RQ++L SAT+ + V R++ + L + I + + K K
Sbjct: 272 DITVILNAVNAECQKRQNVLLSATLTEGVTRLADISL-HDPVSISVLDKSHDQLNPKDKA 330
Query: 611 SCLVAP----HELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 649
V P +L + LK+H+ P K+ + C +
Sbjct: 331 VQEVCPPPAGDKLDSFAIPESLKQHVTVVPS-KLRLVCLAAFI 372
Score = 131 (51.2 bits), Expect = 7.3e-36, Sum P(3) = 7.3e-36
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 660 MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDRE 719
M++ ++ Q R + +EF S+R +L+ +DV+ARG+D P VT +VQ P
Sbjct: 422 MRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPA 481
Query: 720 QYIHXXXXXXXXXXXXXXVLLLAPWE-EY 747
+YIH +L+LAP E EY
Sbjct: 482 EYIHRIGRTARIGCHGSSLLILAPSEAEY 510
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 599 LGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 656
L S P +KQ V P +L L + + D K++VF S+ + Y L
Sbjct: 343 LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSL 400
Score = 38 (18.4 bits), Expect = 7.3e-36, Sum P(3) = 7.3e-36
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 89 NQHKPMSPDEHVKALADRFMKE 110
N K SP +H + +DR +E
Sbjct: 45 NAQKMFSPKKHSVSTSDRNQEE 66
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 415 (151.1 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 115/345 (33%), Positives = 179/345 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S +KA+TA G+ Q T +Q+A + L GKD A TGTGK+ AF+LP +E
Sbjct: 182 FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER 241
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ + P VL+L PTREL Q+ + L + VGG K +
Sbjct: 242 LIYKPRQA-----PITRVLVLVPTRELGIQVHS-VTKQLAQFSSVTTCLAVGGLDVKTQE 295
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L S P IL+ATPGRL+DH+ N S L +++L+LDEAD +LD F + ++ I+
Sbjct: 296 AALRSGP-DILIATPGRLIDHLHNCP--SFHLSSVEVLILDEADRMLDEYFEEQMKEIIR 352
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
R RQ++LFSATM +EV+ ++ + LK T I V + P ++ + P+
Sbjct: 353 LCSRHRQTMLFSATMTEEVKDLASVSLKNP-TRI-FVNSNTDVAPFLRQEFIRIRPNREG 410
Query: 621 FQ--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+ I+ LL PD+ V++F T +++LL M + V E++ Q R
Sbjct: 411 DREAIVSALLTRTF---PDH-VMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLE 466
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
F+ + ILV +DV+ARG+D V +V+ +P + Y+H
Sbjct: 467 ALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVH 511
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 400 (145.9 bits), Expect = 9.3e-36, P = 9.3e-36
Identities = 119/351 (33%), Positives = 184/351 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE G + + A G+ T +Q L G+D V A+TG+GK++ + LPAI
Sbjct: 127 FDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVH 186
Query: 441 VLKATSSSTTQLVP---PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ ++ L P PI VLIL PTRELA QI AE I+ I + GG K
Sbjct: 187 I-----NAQPLLAPGDGPI-VLILAPTRELAVQIQAE-ISKFGKSSRIRNTCVYGGVP-K 238
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
Q R S ++ +ATPGRL+D +E SG L + LVLDEAD +LD+GF +
Sbjct: 239 GPQIRDLSRGVEVCIATPGRLIDMLE--SG-KTNLRRVTYLVLDEADRMLDMGFEPQIRK 295
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPV--KIKQSC-LV 614
I+ + RQ+L++SAT PKEVR ++ L+ +I V +GS++ +I Q +V
Sbjct: 296 IIGQIRPDRQTLMWSATWPKEVRNMAADFLQ---DFIQ-VNIGSLDLSANHRITQIVEVV 351
Query: 615 APHELHFQILHHLLKEHILGTPDYK--VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+ E +++ H+ E ++ D K +++F T V + LR+ ++ K
Sbjct: 352 SESEKRDRMIRHM--EKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQ 409
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q RD + ++F+ K I+V +DV++RG+D ++T V+ P + E YIH
Sbjct: 410 QNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIH 460
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 414 (150.8 bits), Expect = 9.8e-36, P = 9.8e-36
Identities = 111/347 (31%), Positives = 184/347 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ +S +KA + AGY T +Q+A + L GKD A TGTGK+ AF+LP +E
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 441 VL-KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + +S T+ VL+L PTRELA Q+ + L + V GG K
Sbjct: 210 MIYRPKGASCTR------VLVLVPTRELAIQVF-QVFRKLSTFIQLEVCLCAGGLDLKAQ 262
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L S P ++VATPGRL+DH+ N S L +++LVLDEAD +L+ FR + ++
Sbjct: 263 EAALRSGP-DVVVATPGRLIDHLHNSP--SFNLSNIEVLVLDEADRMLEEAFRDQMNELI 319
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSVETPVKIKQSCLV--AP 616
+ RQ+LLFSATM +E+ ++ + L++ +I+ + +T +K++Q + A
Sbjct: 320 RLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINE----NTDTALKLRQEFIRIRAG 375
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
E + + L T IVF T + +LL + + V +M S Q R
Sbjct: 376 RETDREAMVAALVTRTFQT---NTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQR 432
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+ ++ +LV++D+++RG+D V +V+ + +P +QYIH
Sbjct: 433 IESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIH 479
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 393 (143.4 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 115/344 (33%), Positives = 176/344 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G++ + +LT AGY T +QE + ++G+D V A+TGTGK++AF P ++
Sbjct: 9 FQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDR 68
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S + V VL+L PTRELA QIA + + V+ + GG +
Sbjct: 69 LSRNASPAP---VRGTRVLVLAPTRELAGQIAT-SFGTYGAGLNLRVVMVCGGAKIGGQI 124
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+LE ILVATPGRL+D +E ++ V L ++ L+LDEAD +LDLGF + I
Sbjct: 125 RQLERG-AHILVATPGRLIDLMEQRA---VSLDKVETLILDEADQMLDLGFIHALRAIAK 180
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQS-CLVAPHEL 619
+P +RQ+L FSATMPK V ++ L R + + T +I+Q C V E
Sbjct: 181 NVPSKRQTLFFSATMPKAVESLAATFL-RNPAEVSVAPPAT--TAGRIEQRVCFVEQPEK 237
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
LL E I IVF T + L + ++ ++ K Q R++
Sbjct: 238 A-----SLLIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKA 292
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
E F+A + ILV +D++ARG+ +T V+ +P EQ++H
Sbjct: 293 LEAFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVH 336
>UNIPROTKB|F1P8J6 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
Length = 599
Score = 408 (148.7 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 115/371 (30%), Positives = 181/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA Q+ K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---IITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKE 132
Query: 506 DPCQILVATPGRLLDHIENK-SGLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 QGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENYYMVCKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 677
F L H L+ H K ++F ST L + +V+ M K + R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKHKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR + ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>UNIPROTKB|F1MW45 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 IPI:IPI00726158 UniGene:Bt.74315
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:DAAA02045235
Ensembl:ENSBTAT00000009556 Uniprot:F1MW45
Length = 601
Score = 408 (148.7 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 116/371 (31%), Positives = 179/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIVEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K + +GG D R +
Sbjct: 76 EKFKKSQVGAI---IITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 LGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMVCKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 677
F L H L+ H K +VF ST L + V+ M Y R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKYKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 404 (147.3 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 114/355 (32%), Positives = 190/355 (53%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P+L+ F+E + K ++ GY ++T VQ+ ++ G+D + A+TG+GK+ AF
Sbjct: 165 PLLA---FEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAF 221
Query: 434 LLPAIEAVLK-ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
LLP ++ ++K ++S Q +I+ PTREL +QI EA + I + + G
Sbjct: 222 LLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYG-TCIRPVVIYG 280
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GT+ R++ C IL ATPGRLLD IE K +S L+ +K LVLDEAD +LD+GF
Sbjct: 281 GTQTGHSIRQIMQG-CNILCATPGRLLDIIE-KGKIS--LVEVKYLVLDEADRMLDMGFG 336
Query: 553 KDVENIVDC--LPR--RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKI 608
D++ ++ +P RRQ+L+FSAT P+EV+R++ LK ++ ++ +G + +
Sbjct: 337 LDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFL-VIG-NTCGACSDV 394
Query: 609 KQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMY 668
+Q+ L P L +L+ T + +VF T L L + + ++
Sbjct: 395 QQNILQVPRLSKRDKLIEILQS----TGGERTMVFVDTKKKADYLAAFLCQENLPSTSIH 450
Query: 669 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ Q R+ +FR+ K ILV + V++RG+D +V V+ +P E Y+H
Sbjct: 451 GDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVH 505
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 392 (143.0 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 111/345 (32%), Positives = 175/345 (50%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G ++ + AG+ + T +Q ++G+D + A+TG+GK++++LLPAI
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
V + PI VL+L PTRELA QI EA + + I + GG
Sbjct: 159 VHVNAQPMLAHGD--GPI-VLVLAPTRELAVQIQQEA-SKFGSSSKIKTTCIYGGVPKGP 214
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ +I++ATPGRL+D +E+ + L + LVLDEAD +LD+GF + I
Sbjct: 215 QVRDLQKG-VEIVIATPGRLIDMMESNN---TNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
V + RQ+L +SAT PKEV ++S+ L + I +G ++ I+Q V
Sbjct: 271 VSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVI--IGSSDLKANRAIRQIVDVISES 328
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+ L LL++ + G+ +++VF T + LR ++ K Q RD
Sbjct: 329 QKYNKLVKLLEDIMDGS---RILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ EFR+ K I+ +DV+ARG+D DV V+ P E Y+H
Sbjct: 386 VLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 405 (147.6 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 110/350 (31%), Positives = 188/350 (53%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S+ +F+E I K L ++ +T +Q + L GKD + AKTG+GK++AFL+P
Sbjct: 146 SELKFEELNICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVP 205
Query: 437 AIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+I + +K + T VLI+ PTREL QI L K + ++GG
Sbjct: 206 SINILYNIKFLPKNGTG------VLIISPTRELCLQIYQVCKDLCKYIPQTNGI-IIGGM 258
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
++++ IL+ATPGRLLDH++N + L L++DEAD LL +GF ++
Sbjct: 259 SRNEEKKKFIHG-INILIATPGRLLDHMQNTKEFIYK--NLICLIIDEADRLLQIGFEEE 315
Query: 555 VENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYID-TVGLGSVETPVKIKQSCL 613
+ I+ LP++RQ+ LFSAT +V + +L L++ +I+ T + +VE +++Q
Sbjct: 316 INLIIKRLPKKRQTALFSATQTTKVESLIRLSLQKP-IFIEVTTKIATVE---RLQQGYA 371
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ + F +L LK+++ K++VF + M LL + + ++ +K Q
Sbjct: 372 LVDEDKRFLLLFTFLKKNM----SKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQ 427
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R + +F A+K IL+ ++V+ARG+D P+V ++Q P D ++YIH
Sbjct: 428 NKRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIH 477
Score = 42 (19.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 16/96 (16%), Positives = 40/96 (41%)
Query: 175 NYSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSR--NVMDFVRRAYFSGTDKRNFCR 232
+Y+ + S ++ K+ + + + ++ ++ N+ + Y S ++ +
Sbjct: 7 DYNTMKNSNDNNLKKTKKNSIIKKKKKKKKKEILENKDSNIDNLKNENYRSESEAESEST 66
Query: 233 NDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKN 268
ND S + + N+ + N NN + D+KN
Sbjct: 67 NDSVSLNN---IEEDNELNENSENNENNENDEDNKN 99
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 405 (147.6 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 110/350 (31%), Positives = 188/350 (53%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S+ +F+E I K L ++ +T +Q + L GKD + AKTG+GK++AFL+P
Sbjct: 146 SELKFEELNICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVP 205
Query: 437 AIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+I + +K + T VLI+ PTREL QI L K + ++GG
Sbjct: 206 SINILYNIKFLPKNGTG------VLIISPTRELCLQIYQVCKDLCKYIPQTNGI-IIGGM 258
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
++++ IL+ATPGRLLDH++N + L L++DEAD LL +GF ++
Sbjct: 259 SRNEEKKKFIHG-INILIATPGRLLDHMQNTKEFIYK--NLICLIIDEADRLLQIGFEEE 315
Query: 555 VENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYID-TVGLGSVETPVKIKQSCL 613
+ I+ LP++RQ+ LFSAT +V + +L L++ +I+ T + +VE +++Q
Sbjct: 316 INLIIKRLPKKRQTALFSATQTTKVESLIRLSLQKP-IFIEVTTKIATVE---RLQQGYA 371
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ + F +L LK+++ K++VF + M LL + + ++ +K Q
Sbjct: 372 LVDEDKRFLLLFTFLKKNM----SKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQ 427
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R + +F A+K IL+ ++V+ARG+D P+V ++Q P D ++YIH
Sbjct: 428 NKRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIH 477
Score = 42 (19.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 16/96 (16%), Positives = 40/96 (41%)
Query: 175 NYSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSR--NVMDFVRRAYFSGTDKRNFCR 232
+Y+ + S ++ K+ + + + ++ ++ N+ + Y S ++ +
Sbjct: 7 DYNTMKNSNDNNLKKTKKNSIIKKKKKKKKKEILENKDSNIDNLKNENYRSESEAESEST 66
Query: 233 NDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKN 268
ND S + + N+ + N NN + D+KN
Sbjct: 67 NDSVSLNN---IEEDNELNENSENNENNENDEDNKN 99
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 391 (142.7 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 111/349 (31%), Positives = 187/349 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + + P+ ++A+ G+ + T+VQ + L+G+D + A TGTGK+ AF++PA+
Sbjct: 3 KTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPAL 62
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +L + P +LIL PTRELA Q+A +A AL KN + + T+ GG +++
Sbjct: 63 QYLL----DFPRRKAGPARILILTPTRELAMQVAEQAQALAKN-TRLNIFTITGGVQYQ- 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ + + I+VATPGRLL++I+ + R ++ L+LDEAD +LD+GF V+ +
Sbjct: 117 EHADILATTQDIVVATPGRLLEYIDAER-FDCR--AIEWLILDEADRMLDMGFGPTVDRL 173
Query: 559 -VDCLPRRRQSLLFSATMP-KEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
+C R+Q+LLFSAT+ + V + +LK + ++D E P + ++
Sbjct: 174 STECR-WRKQTLLFSATLEGRGVEGFTADLLK-DPAHVDA------EPPRRERKKISQWY 225
Query: 617 HELHFQILH--HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
H + H LLK+ IL + IVF T + L L + ++ + PQ
Sbjct: 226 HRAD-DMPHKVELLKK-ILTEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQD 283
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ FR IL+ +DV+ARG+D PD++ V+ +P + Y+H
Sbjct: 284 RRNNAISRFREGDVNILLATDVAARGIDVPDISHVINFDLPRSADVYLH 332
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 391 (142.7 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 111/349 (31%), Positives = 187/349 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + + P+ ++A+ G+ + T+VQ + L+G+D + A TGTGK+ AF++PA+
Sbjct: 3 KTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPAL 62
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +L + P +LIL PTRELA Q+A +A AL KN + + T+ GG +++
Sbjct: 63 QYLL----DFPRRKAGPARILILTPTRELAMQVAEQAQALAKN-TRLNIFTITGGVQYQ- 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ + + I+VATPGRLL++I+ + R ++ L+LDEAD +LD+GF V+ +
Sbjct: 117 EHADILATTQDIVVATPGRLLEYIDAER-FDCR--AIEWLILDEADRMLDMGFGPTVDRL 173
Query: 559 -VDCLPRRRQSLLFSATMP-KEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
+C R+Q+LLFSAT+ + V + +LK + ++D E P + ++
Sbjct: 174 STECR-WRKQTLLFSATLEGRGVEGFTADLLK-DPAHVDA------EPPRRERKKISQWY 225
Query: 617 HELHFQILH--HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
H + H LLK+ IL + IVF T + L L + ++ + PQ
Sbjct: 226 HRAD-DMPHKVELLKK-ILTEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQD 283
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ FR IL+ +DV+ARG+D PD++ V+ +P + Y+H
Sbjct: 284 RRNNAISRFREGDVNILLATDVAARGIDVPDISHVINFDLPRSADVYLH 332
>SGD|S000001212 [details] [associations]
symbol:DBP8 "ATPase, putative RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001212 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:U00027 GO:GO:0030686
GO:GO:0004004 GO:GO:0000447 GO:GO:0000472 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
OrthoDB:EOG4PP1RW PIR:S48908 RefSeq:NP_012039.1
ProteinModelPortal:P38719 SMR:P38719 DIP:DIP-5628N IntAct:P38719
MINT:MINT-485349 STRING:P38719 PaxDb:P38719 PeptideAtlas:P38719
EnsemblFungi:YHR169W GeneID:856574 KEGG:sce:YHR169W CYGD:YHR169w
GeneTree:ENSGT00700000105515 OMA:FRNLCAI NextBio:982426
Genevestigator:P38719 GermOnline:YHR169W GO:GO:0000480
Uniprot:P38719
Length = 431
Score = 391 (142.7 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 115/351 (32%), Positives = 181/351 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S ++L A Q T +Q+A + LEG+D + AKTG+GK+IAF P
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S + + + ++L PTRELA QIA + AL + + I V +VGG
Sbjct: 60 MLTKWSEDPSGM----FGVVLTPTRELAMQIAEQFTALGSSMN-IRVSVIVGGESIVQQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVR-LMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ P ++ATPGRL HI + +V LM K LVLDEAD LL F + +
Sbjct: 115 LDLQRKP-HFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCI 173
Query: 560 DCLPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVET---PVKIKQSCLV 614
LP + RQ+LLF+AT+ +V+ + +++ + + SV+ P +K ++
Sbjct: 174 SALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYIL 233
Query: 615 APHELHFQILHHLL--KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
P + L+ LL +E+ T I+F + M +L L+++++ V ++S+ P
Sbjct: 234 VPEHVKEAYLYQLLTCEEYENKT----AIIFVNRTMTAEILRRTLKQLEVRVASLHSQMP 289
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R FRA+ IL+ +DV++RG+D P V VV IP D + +IH
Sbjct: 290 QQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIH 340
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 393 (143.4 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 106/343 (30%), Positives = 178/343 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S KA++ GY + +Q + A L GKD + A+TGTGK+ F LP +E
Sbjct: 3 FSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + + Q L+L PTRELA+Q+ E++ + + + GG
Sbjct: 63 LAKGHKAKSGQT----RALVLTPTRELAAQVG-ESVETYGKYLPLRSAVVFGGVPINPQI 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +LVATPGRLLD ++ + V+ L++LVLDEAD +LD+GF +D++ I+
Sbjct: 118 NKLRHG-VDVLVATPGRLLDLVQQNA---VKFNQLEILVLDEADRMLDMGFIRDIKKILA 173
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
LP +RQ+L+FSAT E+R +++ ++ I + T VK + C V +
Sbjct: 174 LLPAKRQNLMFSATFSDEIRELAKGLVNHP-VEISVTPRNAAATTVK-QWICPVDKTQKS 231
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
+L L+K+ +V+VF T + L L + +++ ++ K Q R +
Sbjct: 232 -ALLIQLIKQENW----QQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKAL 286
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++ + +LV +D++ARG+D + VV +P E Y+H
Sbjct: 287 ADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVH 329
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 410 (149.4 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 116/353 (32%), Positives = 191/353 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + + AGY+++T VQ+ ++ + G+D + A+TG+GK+ AFLLP +
Sbjct: 276 FEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSY 335
Query: 441 VLKA--TSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV--GGTRF 496
++ T+S QL P +I+ PTREL +QI +A K G V +V GG +
Sbjct: 336 MMNEGITASQYLQLQEP-EAIIIAPTRELINQIYLDA---RKFSYGTCVRPVVVYGGIQP 391
Query: 497 KVDQRRLESDPCQILVATPGRLLDHI-ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
R +E C IL ATPGRLLD + + K GLS L+ LVLDEAD +LD+GF ++
Sbjct: 392 VHAMRDVEKG-CNILCATPGRLLDIVSKEKIGLSK----LRYLVLDEADRMLDMGFAPEI 446
Query: 556 ENIVDC--LP--RRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGL-GSVETPVKIKQ 610
E ++ +P +RQ+L+FSAT P+E+RR++ LK EH ++ VGL G + V Q
Sbjct: 447 EKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFV-VVGLVGGACSDVA--Q 503
Query: 611 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 670
+ L + L +LK + + ++F +T + L + K + ++
Sbjct: 504 TVLEMRENGKMEKLLEILKS----SEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGD 559
Query: 671 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ Q R+ +FR K ++V + V+ARG+D +V V+ +P + ++Y+H
Sbjct: 560 REQYQRESALWDFRTGKCTVIVCTAVAARGLDIENVQHVINYDVPKEVDEYVH 612
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 390 (142.3 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 130/406 (32%), Positives = 190/406 (46%)
Query: 321 SLGKYDMKITKRVPL-KSLEDEHDFEEQVELIRKEISXXXXXXXXXXXXXXXX-XPILSQ 378
+L D K VP K+ EH E+ +L KE+ P++S
Sbjct: 58 NLAPIDWKTINLVPFEKNFYKEH--EDISKLSTKEVKEIRDKHKITILEGENVPKPVVS- 114
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++ G IK+L + T +Q L GKD + KA+TG+GK++AF+LPA
Sbjct: 115 --INKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+L + PI VL+L PTRELA QI E I I GG K
Sbjct: 173 VHILAQPNLKYGD--GPI-VLVLAPTRELAEQIRQECIKF-STESKIRNTCAYGGVP-KS 227
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
Q IL+A PGRL+D +E LM + LVLDEAD +LD+GF + I
Sbjct: 228 GQIYALKQGVHILIACPGRLIDLLEQNV---TNLMRVTYLVLDEADKMLDMGFELQIRKI 284
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC-LVAPH 617
VD + RQ+L++SAT PKEV+ +++ + K + ++ VG ++ IKQ L+ H
Sbjct: 285 VDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTACRSIKQEIYLLEEH 343
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
E L LL + I D ++IVF T + LR M ++ K Q R
Sbjct: 344 E-KIGNLKSLL-QRIFKDND-RIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERR 400
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ EF+ K I++ +DV++RG+D +V V+ P E Y+H
Sbjct: 401 WVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVH 446
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 390 (142.3 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 130/406 (32%), Positives = 190/406 (46%)
Query: 321 SLGKYDMKITKRVPL-KSLEDEHDFEEQVELIRKEISXXXXXXXXXXXXXXXX-XPILSQ 378
+L D K VP K+ EH E+ +L KE+ P++S
Sbjct: 58 NLAPIDWKTINLVPFEKNFYKEH--EDISKLSTKEVKEIRDKHKITILEGENVPKPVVS- 114
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++ G IK+L + T +Q L GKD + KA+TG+GK++AF+LPA
Sbjct: 115 --INKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+L + PI VL+L PTRELA QI E I I GG K
Sbjct: 173 VHILAQPNLKYGD--GPI-VLVLAPTRELAEQIRQECIKF-STESKIRNTCAYGGVP-KS 227
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
Q IL+A PGRL+D +E LM + LVLDEAD +LD+GF + I
Sbjct: 228 GQIYALKQGVHILIACPGRLIDLLEQNV---TNLMRVTYLVLDEADKMLDMGFELQIRKI 284
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC-LVAPH 617
VD + RQ+L++SAT PKEV+ +++ + K + ++ VG ++ IKQ L+ H
Sbjct: 285 VDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVN-VGSLTLTACRSIKQEIYLLEEH 343
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
E L LL + I D ++IVF T + LR M ++ K Q R
Sbjct: 344 E-KIGNLKSLL-QRIFKDND-RIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERR 400
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ EF+ K I++ +DV++RG+D +V V+ P E Y+H
Sbjct: 401 WVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVH 446
>UNIPROTKB|Q9H8H2 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
EMBL:AF427339 EMBL:AF335567 EMBL:AF335568 EMBL:AF335569
EMBL:AK023695 EMBL:AK027002 EMBL:AK027484 EMBL:AL160165
EMBL:BC012726 IPI:IPI00043990 IPI:IPI00291296 IPI:IPI00552374
IPI:IPI00552716 RefSeq:NP_073616.6 RefSeq:NP_619526.1
UniGene:Hs.660767 ProteinModelPortal:Q9H8H2 SMR:Q9H8H2
IntAct:Q9H8H2 PhosphoSite:Q9H8H2 DMDM:71153334 SWISS-2DPAGE:Q9H8H2
PaxDb:Q9H8H2 PRIDE:Q9H8H2 DNASU:64794 Ensembl:ENST00000310532
Ensembl:ENST00000372153 Ensembl:ENST00000372155
Ensembl:ENST00000372159 GeneID:64794 KEGG:hsa:64794 UCSC:uc004cbq.1
UCSC:uc004cbs.2 UCSC:uc010mzu.1 CTD:64794 GeneCards:GC09M135468
HGNC:HGNC:16715 HPA:HPA020891 neXtProt:NX_Q9H8H2 PharmGKB:PA27218
HOVERGEN:HBG103793 InParanoid:Q9H8H2 OMA:ARIGCHG OrthoDB:EOG42V8FK
PhylomeDB:Q9H8H2 GenomeRNAi:64794 NextBio:66862 ArrayExpress:Q9H8H2
Bgee:Q9H8H2 CleanEx:HS_DDX31 Genevestigator:Q9H8H2
GermOnline:ENSG00000125485 Uniprot:Q9H8H2
Length = 851
Score = 339 (124.4 bits), Expect = 2.4e-35, Sum P(3) = 2.4e-35
Identities = 95/283 (33%), Positives = 150/283 (53%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ + F E G+ P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 226 VFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 285
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A S + P Y L+L PTRELA Q LLK I L+GG
Sbjct: 286 CIPVVQS-LQAMESKIQRSDGP-YALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 343
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ L+ LV DEAD +LDLGF K
Sbjct: 344 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFSRLRWLVFDEADRILDLGFEK 400
Query: 554 DVE---NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQ 610
D+ N V+ ++RQ++L SAT+ + V R++ + L + I + + K K
Sbjct: 401 DITVILNAVNAECQKRQNVLLSATLTEGVTRLADISL-HDPVSISVLDKSHDQLNPKDKA 459
Query: 611 SCLVAP----HELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 649
V P +L + LK+H+ P K+ + C +
Sbjct: 460 VQEVCPPPAGDKLDSFAIPESLKQHVTVVPS-KLRLVCLAAFI 501
Score = 131 (51.2 bits), Expect = 2.4e-35, Sum P(3) = 2.4e-35
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 660 MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDRE 719
M++ ++ Q R + +EF S+R +L+ +DV+ARG+D P VT +VQ P
Sbjct: 551 MRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPA 610
Query: 720 QYIHXXXXXXXXXXXXXXVLLLAPWE-EY 747
+YIH +L+LAP E EY
Sbjct: 611 EYIHRIGRTARIGCHGSSLLILAPSEAEY 639
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 599 LGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 656
L S P +KQ V P +L L + + D K++VF S+ + Y L
Sbjct: 472 LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSL 529
Score = 38 (18.4 bits), Expect = 2.4e-35, Sum P(3) = 2.4e-35
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 89 NQHKPMSPDEHVKALADRFMKE 110
N K SP +H + +DR +E
Sbjct: 174 NAQKMFSPKKHSVSTSDRNQEE 195
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 389 (142.0 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 118/347 (34%), Positives = 184/347 (53%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F++ + P +++L A G++ T +Q+ TL LE +D + +A TGTGK+ +FLLPA++
Sbjct: 2 QFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + Q VLIL PTRELASQI A L + G+ + + GG +
Sbjct: 62 HLIDFPRRYSGQA----RVLILTPTRELASQIHRYACHLATDQ-GLNIAIITGGVPYAPQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ + ILVATPGRL+++++ K S + +L++DEAD +LD+GF V+ I
Sbjct: 117 EEALKGN-IDILVATPGRLMEYLD-KGKFSAE--SVDILIIDEADRMLDMGFSAVVKAIA 172
Query: 560 DCLPRRRQSLLFSATMPKE-VRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
R+Q++LFSAT+ V R ++ VL + ID V E KI Q +A +
Sbjct: 173 LEAQGRKQNMLFSATLEGSGVIRFAREVLN-DPIEID-VDAPRKEK-AKIHQWIHLADDK 229
Query: 619 LH-FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
H F +L HLLK+ D K IVF T V S L L + + M Q R
Sbjct: 230 DHKFALLCHLLKQE-----DVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKR 284
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ F + +L+ +DV+ARG+D D++ V+ +P + YIH
Sbjct: 285 FQALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIH 331
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 389 (142.0 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 111/367 (30%), Positives = 183/367 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ + L+ G T +Q+ + L+GKD + A+TGTGK+ AF LP I+
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ I L+L PTRELA Q+ A K + + ++ + GGT KV
Sbjct: 68 FIEQPWQREANS-KEIRALVLVPTRELAQQVLDSLQAYAKGTE-LKIVAVYGGTSMKVQL 125
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L IL+ATPGRLLDH KS + L +++LVLDEAD +LD+GF D++ ++
Sbjct: 126 NHLRGG-VDILIATPGRLLDHAHVKS---LFLGKVEVLVLDEADRMLDMGFMPDLQRVLR 181
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
L RQ+L FSAT +++ ++ +++ T + ET ++Q +V P +
Sbjct: 182 RLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAET---VQQ--MVYPVDKK 236
Query: 621 FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
+ LL +++G+ +++ V+VF T + L L+ + + K Q R +
Sbjct: 237 RK--RELLS-YLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKA 293
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 739
++F+A K L+ +DV+ARG+D + VV +P E Y+H V
Sbjct: 294 LDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVS 353
Query: 740 LLAPWEE 746
LL+ E+
Sbjct: 354 LLSHDEQ 360
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 389 (142.0 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 118/347 (34%), Positives = 184/347 (53%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F++ + P +++L A G++ T +Q+ TL LE +D + +A TGTGK+ +FLLPA++
Sbjct: 2 QFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + Q VLIL PTRELASQI A L + G+ + + GG +
Sbjct: 62 HLIDFPRRYSGQA----RVLILTPTRELASQIHRYACHLATDQ-GLNIAIITGGVPYAPQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ + ILVATPGRL+++++ K S + +L++DEAD +LD+GF V+ I
Sbjct: 117 EEALKGN-IDILVATPGRLMEYLD-KGKFSAE--SVDILIIDEADRMLDMGFSAVVKAIA 172
Query: 560 DCLPRRRQSLLFSATMPKE-VRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
R+Q++LFSAT+ V R ++ VL + ID V E KI Q +A +
Sbjct: 173 LEAQGRKQNMLFSATLEGSGVIRFAREVLN-DPIEID-VDAPRKEK-AKIHQWIHLADDK 229
Query: 619 LH-FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
H F +L HLLK+ D K IVF T V S L L + + M Q R
Sbjct: 230 DHKFALLCHLLKQE-----DVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKR 284
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ F + +L+ +DV+ARG+D D++ V+ +P + YIH
Sbjct: 285 FQALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIH 331
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 389 (142.0 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 119/355 (33%), Positives = 179/355 (50%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++ F + P + L G+ MT +Q +L A L+G+D + + KTG+GK+ AF L
Sbjct: 1 MNANSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
VL + + + L+LCPTRELA Q+A + L + I VLTL GG
Sbjct: 61 ----GVLSNLNVKRFR----VQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMP 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
LE ILV TPGR+LDH+ + L L LVLDEAD +L++GF++ +
Sbjct: 113 MGPQIGSLEHG-AHILVGTPGRILDHLSKDR---IDLSELNTLVLDEADRMLEMGFQEAL 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKEVRRISQ------LVLKREHTYIDTVGLGSVETPVKIK 609
E I+ P RQ+LLFSAT P + +I+Q L++K E T+ DT + K++
Sbjct: 169 EAIIAAAPAERQTLLFSATYPASIEQIAQSVTRNALMIKVEATH-DTSSIRQYF--YKVE 225
Query: 610 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 669
S L +LHH P V VFC+T + L + +V E++
Sbjct: 226 GSA-ARDEALETLLLHH--------QPTSSV-VFCNTKREVQNVADALHQSGFSVIELHG 275
Query: 670 RKPQLYRDRISEEFRASKRL-ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q RD+ +F A+K + ILV +DV+ARG+D ++ +V + D E ++H
Sbjct: 276 DMEQRERDQALVQF-ANKSISILVATDVAARGLDVDNLDAVFNYDLSRDPEVHVH 329
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 389 (142.0 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 111/367 (30%), Positives = 183/367 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ + L+ G T +Q+ + L+GKD + A+TGTGK+ AF LP I+
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ I L+L PTRELA Q+ A K + + ++ + GGT KV
Sbjct: 68 FIEQPWQREANS-KEIRALVLVPTRELAQQVLDSLQAYAKGTE-LKIVAVYGGTSMKVQL 125
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L IL+ATPGRLLDH KS + L +++LVLDEAD +LD+GF D++ ++
Sbjct: 126 NHLRGG-VDILIATPGRLLDHAHVKS---LFLGKVEVLVLDEADRMLDMGFMPDLQRVLR 181
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
L RQ+L FSAT +++ ++ +++ T + ET ++Q +V P +
Sbjct: 182 RLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAET---VQQ--MVYPVDKK 236
Query: 621 FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
+ LL +++G+ +++ V+VF T + L L+ + + K Q R +
Sbjct: 237 RK--RELLS-YLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKA 293
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 739
++F+A K L+ +DV+ARG+D + VV +P E Y+H V
Sbjct: 294 LDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVS 353
Query: 740 LLAPWEE 746
LL+ E+
Sbjct: 354 LLSHDEQ 360
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 403 (146.9 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 108/350 (30%), Positives = 189/350 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ G+D + A+TG+GK+ AFLLP +
Sbjct: 292 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAH 351
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 352 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQLGH 409
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I K + +R + K LVLDEAD +LD+GF +++ +
Sbjct: 410 SIRQIVQG-CNILCATPGRLMDVI-GKEKIGLRQV--KYLVLDEADRMLDMGFGPEMKKL 465
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+L+FSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 466 ISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLF---VAVGQVGGACRDVQQTIL 522
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 523 QVGQYSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 578
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 579 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 628
Score = 51 (23.0 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 24/90 (26%), Positives = 37/90 (41%)
Query: 180 SESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRA-YFSGTDKRNF--CRNDG- 235
S +KF + S+ +++C D +T RN F +R Y G D R G
Sbjct: 99 SNNKFEE-GDSSGFWRESSIDCEDNQT----RN-RGFSKRGGYQDGNDSEALGSSRRGGR 152
Query: 236 SSTRD-KAGFDTGNKAKPFARNLGNNRENG 264
S R + GF G+ + ++ G R G
Sbjct: 153 GSFRGCRGGFGRGSPNSDYEQDEGTQRSGG 182
Score = 38 (18.4 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 240 DKAGFDTGNKAKPFARNLGNNRENGD-SKNMSEFMK 274
+K + +G F R ++ E GD S FM+
Sbjct: 23 EKDRYSSGANGDTFNRTPASSSEMGDGSSRRDHFMR 58
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 403 (146.9 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 108/350 (30%), Positives = 189/350 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ G+D + A+TG+GK+ AFLLP +
Sbjct: 292 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAH 351
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 352 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQLGH 409
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I K + +R + K LVLDEAD +LD+GF +++ +
Sbjct: 410 SIRQIVQG-CNILCATPGRLMDVI-GKEKIGLRQV--KYLVLDEADRMLDMGFGPEMKKL 465
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+L+FSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 466 ISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLF---VAVGQVGGACRDVQQTIL 522
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 523 QVGQYSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 578
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 579 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 628
Score = 51 (23.0 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 24/90 (26%), Positives = 37/90 (41%)
Query: 180 SESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRA-YFSGTDKRNF--CRNDG- 235
S +KF + S+ +++C D +T RN F +R Y G D R G
Sbjct: 99 SNNKFEE-GDSSGFWRESSIDCEDNQT----RN-RGFSKRGGYQDGNDSEALGSSRRGGR 152
Query: 236 SSTRD-KAGFDTGNKAKPFARNLGNNRENG 264
S R + GF G+ + ++ G R G
Sbjct: 153 GSFRGCRGGFGRGSPNSDYEQDEGTQRSGG 182
Score = 38 (18.4 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 240 DKAGFDTGNKAKPFARNLGNNRENGD-SKNMSEFMK 274
+K + +G F R ++ E GD S FM+
Sbjct: 23 EKDRYSSGANGDTFNRTPASSSEMGDGSSRRDHFMR 58
>UNIPROTKB|F1RFL5 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969 OMA:CACVEYW
EMBL:CU468658 RefSeq:XP_001927747.2 UniGene:Ssc.4554
UniGene:Ssc.95961 Ensembl:ENSSSCT00000010713 GeneID:100157342
KEGG:ssc:100157342 Uniprot:F1RFL5
Length = 600
Score = 404 (147.3 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 118/372 (31%), Positives = 177/372 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPRVLDVLQELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K + +GG D R +
Sbjct: 76 EKLKKSQVGAI---IITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 HGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSV-----ETPVKIKQSCLVAPH 617
P++R++ LFSAT +EV + + L R I G+ +TP +++ +V
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGL-RNPVRISVKEKGAAASSTQKTPSRLENYYMVCKA 251
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-R 676
+ F L H L+ H K +VF ST L + +V+ M Y R
Sbjct: 252 DEKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALEALVRSVKIMCIHGKMKYKR 307
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
++I EFR + ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 308 NKIFMEFRQLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGS 367
Query: 737 XVLLLAPWEEYF 748
++ L P EE +
Sbjct: 368 ALVFLLPMEESY 379
>ZFIN|ZDB-GENE-031113-10 [details] [associations]
symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
Uniprot:B1H1J4
Length = 759
Score = 409 (149.0 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 107/348 (30%), Positives = 181/348 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F ISP TIK L A G + +Q T +A +GKD + +A+TGTGK+ +F +P +E
Sbjct: 168 FSNFRISPNTIKLLQARGVSYLFDIQVKTFNAVYDGKDLIGQARTGTGKTFSFAVPLVEK 227
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
L++ + PP VL+L PTRELA Q+ + + + + V GG+ +
Sbjct: 228 -LQSGDQERRRGRPP-KVLVLAPTRELAIQVTKDFKDITRK---LSVTCFYGGSSYNPQI 282
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ S +LV TPGR+ DH++N + L L+ +VLDE D +LD+GF + VE I+
Sbjct: 283 DAIRSG-IDVLVGTPGRIRDHLQNNK---LDLSQLQHVVLDEVDQMLDMGFAEQVEEILS 338
Query: 561 C-----LPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
++ Q+LLFSAT P V +++ ++ + ++D +G + + ++ +
Sbjct: 339 ASYKKDAEQKPQTLLFSATCPSWVYDVAKKYMRSQFIHVDLIGKKTQKAATTVEHLAIAC 398
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
++ +++ + G+ + IVFC T + L L +K + + ++ PQ
Sbjct: 399 HWSQRASVIGDVIQVYS-GSHG-RTIVFCETKKEATELSLNT-SIKQSAQSLHGDIPQKQ 455
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 456 REVTLKGFRNGSFEVLVATNVAARGLDIPEVDLVIQSSPPNDVESYIH 503
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 399 (145.5 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 112/344 (32%), Positives = 179/344 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + P I L + + T +Q + + G+D + AKTG+GK++AF+LPA+
Sbjct: 132 FNEAPL-PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVH 190
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + P VL+L PTRELA Q+ +I + G+ + L GG
Sbjct: 191 ITKQAHRQRGE--GPA-VLVLLPTRELAQQVQEVSIDFCHSL-GLKMTCLFGGASKGPQA 246
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R LE I+VATPGRLLD ++N G + + LVLDEAD +LD+GF ++ I+
Sbjct: 247 RDLERG-VDIVVATPGRLLDFLDN--G-TTNMKKCSYLVLDEADRMLDMGFEPQIKKIIG 302
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+ RQ+L+FSAT PKEVR ++ +++ +++ +GS+E + +V E H
Sbjct: 303 QIRPDRQTLMFSATWPKEVRALAS-DFQKDAAFLN---VGSLELAANHNITQVVDILEEH 358
Query: 621 FQILHHL-LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
+ + L HI+ + K I+F T L +R ++ K Q RD +
Sbjct: 359 AKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWV 418
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+EF+A K I++ +DV+ARG+D D+ V+ P + E Y+H
Sbjct: 419 LQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVH 462
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 387 (141.3 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 99/276 (35%), Positives = 152/276 (55%)
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
+ LI+ PTRELA QI E +L + I VL + GG R+L+ + I+VATP
Sbjct: 74 VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNT-HIVVATP 132
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDHI ++ + L L +VLDEAD +L GF D+E+I+D P +Q++LFSAT+
Sbjct: 133 GRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATI 189
Query: 576 PKEVRRIS-------QLV-LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 627
PK++++++ Q++ ++ E +DT+ +ET + K P L F ++
Sbjct: 190 PKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK------PDALRF-VMDR- 241
Query: 628 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 687
P + ++FC T + S LY L+ + N E++ PQ R+R+ + FR +K
Sbjct: 242 ------DQP-FLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAK 294
Query: 688 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
L+ +DV+ARG+D VT V IP D E YIH
Sbjct: 295 IQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIH 330
Score = 370 (135.3 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 93/243 (38%), Positives = 137/243 (56%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + SS Q LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKI--DPESSDVQ------ALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGNT-HIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEVRRIS-------QLV-LKREHTYIDTVGLGSVETPVKIKQ 610
+D P +Q++LFSAT+PK++++++ Q++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKP 232
Query: 611 SCL 613
L
Sbjct: 233 DAL 235
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 387 (141.3 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 99/276 (35%), Positives = 152/276 (55%)
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
+ LI+ PTRELA QI E +L + I VL + GG R+L+ + I+VATP
Sbjct: 74 VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNT-HIVVATP 132
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDHI ++ + L L +VLDEAD +L GF D+E+I+D P +Q++LFSAT+
Sbjct: 133 GRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATI 189
Query: 576 PKEVRRIS-------QLV-LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 627
PK++++++ Q++ ++ E +DT+ +ET + K P L F ++
Sbjct: 190 PKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK------PDALRF-VMDR- 241
Query: 628 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 687
P + ++FC T + S LY L+ + N E++ PQ R+R+ + FR +K
Sbjct: 242 ------DQP-FLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAK 294
Query: 688 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
L+ +DV+ARG+D VT V IP D E YIH
Sbjct: 295 IQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIH 330
Score = 370 (135.3 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 93/243 (38%), Positives = 137/243 (56%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + SS Q LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKI--DPESSDVQ------ALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGNT-HIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEVRRIS-------QLV-LKREHTYIDTVGLGSVETPVKIKQ 610
+D P +Q++LFSAT+PK++++++ Q++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKP 232
Query: 611 SCL 613
L
Sbjct: 233 DAL 235
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 408 (148.7 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 114/351 (32%), Positives = 183/351 (52%)
Query: 382 DECGISPLTI-----KALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+E IS L++ ++L G + +Q A L L+G+D + +AKTGTGK++AF +P
Sbjct: 100 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 159
Query: 437 AIEAVLKATSSST----TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I+ + + T + +P L+L PTRELA Q+ E + ++ + + + G
Sbjct: 160 IIKRLTEEAGDYTAFRRSGRLPKF--LVLAPTRELAKQVEKE---IKESAPYLSTVCVYG 214
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + + Q L ++V TPGR++D IE G S++L ++ LVLDEAD +L +GF
Sbjct: 215 GVSYTIQQSALTRG-VDVVVGTPGRIIDLIE---GRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC 612
+ VE+I++ LP +RQS+LFSATMP V+++++ L ID VG + IK
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLN-IDLVGDQDEKLAEGIKLYA 329
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+ IL L+ + G K IVF T + L L + ++
Sbjct: 330 IATTSTSKRTILSDLITVYAKGG---KTIVFTQTKRDADEVSLALSN-SIATEALHGDIS 385
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R+R FR K +LV +DV++RG+D P+V V+ +P D E ++H
Sbjct: 386 QHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 404 (147.3 bits), Expect = 5.0e-35, P = 5.0e-35
Identities = 120/368 (32%), Positives = 186/368 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S + A+ AAGY Q T VQ+ + A L+G+D +V A+TGTGK+ F LP +E
Sbjct: 3 FASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 441 VLKATSSSTTQLVPPIY--VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +Q P VL+L PTRELA+Q+ ++ L + GG
Sbjct: 63 LFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVH-DSFKLYARDLKFVSACIFGGVGMN- 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
Q + + +LVA PGRLLD + + SV L +++LVLDEAD +LD+GF DV+ +
Sbjct: 121 PQVQAMARGVDVLVACPGRLLD-LAGQG--SVDLSHVEILVLDEADRMLDMGFVHDVKKV 177
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ LP +RQ+LLFSAT K++ ++ +L T +VE +I+Q P
Sbjct: 178 LARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVE---RIEQRVFRLPAS 234
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+L HL+ G + +V+VF T + L L + ++ ++ K Q R +
Sbjct: 235 HKRALLAHLITA---GAWE-QVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTK 290
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 738
+F+A + ILV +D++ARG+D + VV +P E Y+H +
Sbjct: 291 ALADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAI 350
Query: 739 LLLAPWEE 746
L+AP EE
Sbjct: 351 SLVAPDEE 358
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 406 (148.0 bits), Expect = 6.3e-35, P = 6.3e-35
Identities = 108/350 (30%), Positives = 188/350 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 270 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 329
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 330 MMHDGITASRFKELQEP-ECIIVAPTRELVNQIYLEA-RKFSFGTCVRAVVIYGGTQLGH 387
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 388 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRMLDMGFGPEMKKL 443
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+L+FSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 444 ISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLF---VAVGQVGGACRDVQQTVL 500
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 501 QVGQFSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 556
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 557 REREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 606
>UNIPROTKB|Q2NL08 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:BC111255 IPI:IPI00726158
RefSeq:NP_001039472.1 UniGene:Bt.74315 PRIDE:Q2NL08 GeneID:508581
KEGG:bta:508581 CTD:57696 HOGENOM:HOG000268803 HOVERGEN:HBG107796
InParanoid:Q2NL08 KO:K14809 OrthoDB:EOG4WH8KN NextBio:20868584
Uniprot:Q2NL08
Length = 601
Score = 402 (146.6 bits), Expect = 6.3e-35, P = 6.3e-35
Identities = 116/371 (31%), Positives = 178/371 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L G+ MT VQ AT+ ++ KD +A TG+GK++AF++P E +L+
Sbjct: 16 LHPKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIEEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K + +GG D R +
Sbjct: 76 EKFKKSQVGAI---IITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 LGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMVCKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 677
F L H L+ H K +VF ST L + V+ M Y R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKYKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 406 (148.0 bits), Expect = 7.0e-35, P = 7.0e-35
Identities = 109/351 (31%), Positives = 191/351 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 288 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 347
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 348 MMHDGITASRFKELQEP-ECIIVAPTRELVNQIYLEA-RKFSFGTCVRAVVIYGGTQLGH 405
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 406 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRMLDMGFGPEMKKL 461
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+L+FSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 462 ISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLF---VAVGQVGGACRDVQQADL 518
Query: 614 -VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
V + ++L +L+ +G D + +VF T + L + K++ ++ +
Sbjct: 519 QVGQYSKREKLLE-ILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDRE 573
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 574 QREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 624
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 406 (148.0 bits), Expect = 7.1e-35, P = 7.1e-35
Identities = 108/350 (30%), Positives = 188/350 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 349
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 350 MMHDGITASRFKELQEP-ECIIVAPTRELVNQIYLEA-RKFSFGTCVRAVVIYGGTQLGH 407
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 408 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRMLDMGFGPEMKKL 463
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+L+FSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 464 ISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLF---VAVGQVGGACRDVQQTVL 520
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 521 QVGQFSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 576
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 577 REREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 626
>UNIPROTKB|A4FV23 [details] [associations]
symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
Length = 784
Score = 407 (148.3 bits), Expect = 7.4e-35, P = 7.4e-35
Identities = 114/373 (30%), Positives = 183/373 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L A G + +Q T GKD + +A+TGTGK+ +F +P +E
Sbjct: 189 FSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLVEK 248
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L P VL+L PTRELASQ++ + + K + V GGT +
Sbjct: 249 LLGELQDRKRGRAPQ--VLVLAPTRELASQVSRDFSDITKK---LAVACFYGGTPYGGQI 303
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+++ ILV TPGR+ DH++N G + L LK +VLDE D +LD+GF VE I+
Sbjct: 304 ERMKNG-IDILVGTPGRIKDHLQN--G-KLDLTKLKHVVLDEVDQMLDMGFADQVEEIL- 358
Query: 561 CLPRRR------QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLV 614
C+ ++ Q+LLFSAT P V +++ +K + +D +G + +T + ++ +
Sbjct: 359 CVAYKKDSEDNPQTLLFSATCPYWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIK 418
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
++ +++ + G + I+FC T L + ++ + + ++ PQ
Sbjct: 419 CHWTQRAAVIGDVIRVYS-GFQG-RTIIFCETKKEAQELSQNVA-VRQDAQSLHGDIPQK 475
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R+ + FR +LV ++V+ARG+D P+V VVQ P D E YIH
Sbjct: 476 QREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRT 535
Query: 735 XXXVLLLAPWEEY 747
+ EEY
Sbjct: 536 GVCICFYQHKEEY 548
>MGI|MGI:1915098 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915098 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:AK129402
EMBL:AK033741 EMBL:AK154422 EMBL:BC117786 EMBL:BC117787
IPI:IPI00453808 RefSeq:NP_080685.2 UniGene:Mm.281601
ProteinModelPortal:Q6ZPL9 SMR:Q6ZPL9 IntAct:Q6ZPL9 STRING:Q6ZPL9
PRIDE:Q6ZPL9 Ensembl:ENSMUST00000071057 GeneID:67848 KEGG:mmu:67848
UCSC:uc008zqc.2 InParanoid:Q6ZPL9 NextBio:325707 Bgee:Q6ZPL9
CleanEx:MM_DDX55 Genevestigator:Q6ZPL9
GermOnline:ENSMUSG00000029389 Uniprot:Q6ZPL9
Length = 600
Score = 401 (146.2 bits), Expect = 8.1e-35, P = 8.1e-35
Identities = 113/371 (30%), Positives = 179/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I ++ PTRELA QI K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---VITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQ 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 HGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 618
P++R++ LFSAT +EV + + L+ + G+ + +TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMICKAD 252
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 677
F L H L+ K +VF ST L + V+ + Y R+
Sbjct: 253 EKFNQLVHFLRSR----QQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKYKRN 308
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 737
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 738 VLLLAPWEEYF 748
++ L P EE +
Sbjct: 369 LVFLLPMEEAY 379
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 381 (139.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 114/347 (32%), Positives = 171/347 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPH 617
VD + RQ+++FSAT P+ + +++ +L + I+ VG SV ++Q +V
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKP---IEVQVGGRSVVCS-DVEQQVIVIEE 602
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYR 676
E F L LL + VI+F LL L+R ++ Q R
Sbjct: 603 EKKFLKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDR 658
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
D I +F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 659 DSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 79 (32.9 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K A N ++E DS S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-AENRSRSKEKTDSGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 381 (139.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 114/347 (32%), Positives = 171/347 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPH 617
VD + RQ+++FSAT P+ + +++ +L + I+ VG SV ++Q +V
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKP---IEVQVGGRSVVCS-DVEQQVIVIEE 602
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYR 676
E F L LL + VI+F LL L+R ++ Q R
Sbjct: 603 EKKFLKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDR 658
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
D I +F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 659 DSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 79 (32.9 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K A N ++E DS S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-AENRSRSKEKTDSGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 381 (139.2 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 114/347 (32%), Positives = 171/347 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPH 617
VD + RQ+++FSAT P+ + +++ +L + I+ VG SV ++Q +V
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKP---IEVQVGGRSVVCS-DVEQQVIVIEE 602
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYR 676
E F L LL + VI+F LL L+R ++ Q R
Sbjct: 603 EKKFLKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDR 658
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
D I +F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 659 DSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 79 (32.9 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K A N ++E DS S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-AENRSRSKEKTDSGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|G4MSR4 [details] [associations]
symbol:MGG_07099 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_003715292.1 EnsemblFungi:MGG_07099T0
GeneID:2682984 KEGG:mgr:MGG_07099 Uniprot:G4MSR4
Length = 717
Score = 391 (142.7 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 100/244 (40%), Positives = 144/244 (59%)
Query: 383 ECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV 441
+ I IKA+T Y MT VQ TL+ L+GKD V +AKTGTGK++AFL+P I+ +
Sbjct: 81 KANIDESIIKAITVDMRYEDMTDVQSMTLAPALKGKDLVAQAKTGTGKTLAFLIPVIQKI 140
Query: 442 LKATSS--STTQLVP-------PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
L A S ++ P I +I+ PTRELA QI EA L + + G+ V T VG
Sbjct: 141 LDADPSLKEVSRGRPRRFAQRQSIKAIIISPTRELAEQIGKEATRLCQRN-GVTVQTAVG 199
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKMLVLDEADHLLDLGF 551
GT + RR+ + C +LV TPGRL D + ++ SG+ ++ LVLDEAD +LD+GF
Sbjct: 200 GTGKRESLRRIHMEGCHLLVGTPGRLNDLLSDELSGIDAS--NVQALVLDEADRMLDVGF 257
Query: 552 RKDVENIVDCLPRR----RQSLLFSATMPKEVRRISQ-LVLKREHTYIDTVGLGSVETPV 606
++ +IVD LP R RQ+LLFSAT+PK V +++ V K+ ++ TV ++T
Sbjct: 258 ENELRSIVDMLPDRQQVPRQTLLFSATLPKNVVGLARWYVDKQNFEFVQTVRADEIQTHE 317
Query: 607 KIKQ 610
++ Q
Sbjct: 318 RVPQ 321
Score = 254 (94.5 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 87/287 (30%), Positives = 143/287 (49%)
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG-GTRFKVDQRRLESDPCQI-LVA 513
I +I+ PTRELA QI EA L + + + G G R + + +E +
Sbjct: 164 IKAIIISPTRELAEQIGKEATRLCQRNGVTVQTAVGGTGKRESLRRIHMEGCHLLVGTPG 223
Query: 514 TPGRLLDHIENKSGLSV-RLMGLKMLVLDEA-DHLLDLGFRKDVENIVDCLPRRRQSLLF 571
LL + SG+ + L + D D + R V+ + D RQ+LLF
Sbjct: 224 RLNDLLS--DELSGIDASNVQALVLDEADRMLDVGFENELRSIVDMLPDRQQVPRQTLLF 281
Query: 572 SATMPKEVRRISQ-LVLKREHTYIDTVGLGSVETPVKIKQSCL-------VAPHELHFQI 623
SAT+PK V +++ V K+ ++ TV ++T ++ Q + + P L +
Sbjct: 282 SATLPKNVVGLARWYVDKQNFEFVQTVRADEIQTHERVPQFIVPTSSFENLLPAALELML 341
Query: 624 LHHLLKEHILGTPDYKVIVFCS-TGMVTSLLYLLLREMKMNVREM------YSRKPQLYR 676
++ P +K IVF T MV ++ L RE+ + + ++ +++ Q R
Sbjct: 342 REIRAAKNDPSQPPFKAIVFFPFTNMV-AMAGELFRELAVQIPDLPEVFHIHAQLSQNQR 400
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ ++ FR SK IL+++DV+ARGMD+P+VT V+QVG+PPD+EQYIH
Sbjct: 401 TKAADYFRKSKSGILISTDVTARGMDFPNVTHVIQVGLPPDQEQYIH 447
Score = 60 (26.2 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 807 TTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 846
T L EL + G +PP A K+GL ++PG+ +
Sbjct: 540 TLLKELTSMTKNLWGWDKPPAFSPDRAAKLGLYNVPGVNI 579
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 406 (148.0 bits), Expect = 8.6e-35, P = 8.6e-35
Identities = 115/346 (33%), Positives = 179/346 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT-GKSIAFLLPAIE 439
F + +S +KA+TA G+ Q T +Q+A + L GKD A TGT GK+ AF+LP +E
Sbjct: 182 FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTVGKTAAFILPVLE 241
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + P VL+L PTREL Q+ + L + VGG K
Sbjct: 242 RLIYKPRQA-----PITRVLVLVPTRELGIQVHS-VTKQLAQFSSVTTCLAVGGLDVKTQ 295
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L S P IL+ATPGRL+DH+ N S L +++L+LDEAD +LD F + ++ I+
Sbjct: 296 EAALRSGP-DILIATPGRLIDHLHNCP--SFHLSSVEVLILDEADRMLDEYFEEQMKEII 352
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
R RQ++LFSATM +EV+ ++ + LK T I V + P ++ + P+
Sbjct: 353 RLCSRHRQTMLFSATMTEEVKDLASVSLKNP-TRI-FVNSNTDVAPFLRQEFIRIRPNRE 410
Query: 620 HFQ--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ I+ LL PD+ V++F T +++LL M + V E++ Q R
Sbjct: 411 GDREAIVSALLTRTF---PDH-VMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRL 466
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
F+ + ILV +DV+ARG+D V +V+ +P + Y+H
Sbjct: 467 EALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVH 512
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 402 (146.6 bits), Expect = 9.0e-35, P = 9.0e-35
Identities = 120/368 (32%), Positives = 187/368 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S ++A+ AAGY Q T VQ+ + A L+G+D +V A+TGTGK+ F LP +E
Sbjct: 3 FASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 441 VLKATSSSTTQLVPPIY--VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +Q P VL+L PTRELA+Q+ E+ L + GG
Sbjct: 63 LFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVH-ESFKLYARDLKFVSACIFGGVGMN- 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
Q + S +LVA PGRLLD + + SV L +++LVLDEAD +LD+GF DV+ +
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLD-LAGQG--SVDLSHVEILVLDEADRMLDMGFVHDVKKV 177
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 618
+ LP +RQ+LLFSAT ++ ++ +L T +VE ++ + L A H+
Sbjct: 178 LARLPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVER-IEQRVFRLAANHK 236
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
+L HL+ +G + +V+VF T + L L + + ++ K Q R +
Sbjct: 237 R--SLLAHLIT---VGAWE-QVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTK 290
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 738
+F+A I+V +D++ARG+D + VV +P E Y+H +
Sbjct: 291 ALADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAI 350
Query: 739 LLLAPWEE 746
L+AP EE
Sbjct: 351 SLVAPDEE 358
>TAIR|locus:2825324 [details] [associations]
symbol:AT1G71370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0003723 EMBL:AC016163 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AK118294 IPI:IPI00527105
RefSeq:NP_177293.1 UniGene:At.70349 ProteinModelPortal:Q8GXD6
SMR:Q8GXD6 PRIDE:Q8GXD6 EnsemblPlants:AT1G71370.1 GeneID:843478
KEGG:ath:AT1G71370 GeneFarm:1028 TAIR:At1g71370 InParanoid:Q8GXD6
OMA:EYLKCEA PhylomeDB:Q8GXD6 ProtClustDB:CLSN2914591
Genevestigator:Q8GXD6 GermOnline:AT1G71370 Uniprot:Q8GXD6
Length = 558
Score = 396 (144.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 126/430 (29%), Positives = 200/430 (46%)
Query: 380 RFDECGISPLT---IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
RF E PL+ I+AL +G+ T VQ T+ KD VV A TG+GK++AFLLP
Sbjct: 15 RFSELK-PPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLP 73
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE + + S+S + +I+ PTREL++QI A + + + LVGG
Sbjct: 74 FIEIIRR--SNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREV 131
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ D LE + +L+ TPGRL D ++ L R L++L+LDEAD LLD+GF+K V
Sbjct: 132 EADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFR--NLEILILDEADRLLDMGFQKQVN 189
Query: 557 NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
I+ LP++R++ LFSAT + V +++ L+ I S +T + L
Sbjct: 190 YIISRLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKS-KTSSGLYCEYLKCE 248
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM----KMNVREMYSRKP 672
+ L HLL E+ + K++VF T L+L ++ ++ + +
Sbjct: 249 ADQKSSQLVHLLIEN----KNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMD 304
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 732
Q RD F + +L+ +DV+ARG+D P + VVQ P D + +IH
Sbjct: 305 QKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARME 364
Query: 733 XXXXXVLLLAPWE-EYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHA 791
++ L P E +Y N + + +A D V E A
Sbjct: 365 RQGRAIVFLMPKETDYVEFMRIRRVPLQERKCSENASDVIPIIRSLAIKDRAVLEKGLQA 424
Query: 792 WLGYYNSIRE 801
++ + + +E
Sbjct: 425 FVSFVRAYKE 434
>TAIR|locus:2153564 [details] [associations]
symbol:AT5G05450 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB010692 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AJ010469 IPI:IPI00516547
PIR:T51344 RefSeq:NP_196164.1 UniGene:At.23004
ProteinModelPortal:Q9FLB0 SMR:Q9FLB0 PaxDb:Q9FLB0 PRIDE:Q9FLB0
EnsemblPlants:AT5G05450.1 GeneID:830428 KEGG:ath:AT5G05450
GeneFarm:935 TAIR:At5g05450 InParanoid:Q9FLB0 OMA:MDSSANI
PhylomeDB:Q9FLB0 ProtClustDB:CLSN2679231 Genevestigator:Q9FLB0
GermOnline:AT5G05450 Uniprot:Q9FLB0
Length = 593
Score = 399 (145.5 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 117/388 (30%), Positives = 195/388 (50%)
Query: 376 LSQKRFDECGISPLT---IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
L++ RF + PL+ I+AL + + T VQ AT+ KD V A TG+GK++A
Sbjct: 11 LTETRFSDLE-PPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLA 69
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
F++P +E + ++TS + +I+ PTREL++QI A + + + LVG
Sbjct: 70 FVVPLVEILRRSTSFPPKP--HQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVG 127
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G K D + +E + C +L+ TPGRL D +E L R L++L+LDEAD LL++GF+
Sbjct: 128 GREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFR--NLEILILDEADRLLEMGFQ 185
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC 612
+ V I+ LP++R++ LFSAT + V +++ L R ++ E+ ++ S
Sbjct: 186 RQVNYIISRLPKQRRTGLFSATQTEGVEELAKAGL-RNPVRVEVRAKSKSESSQQLTNS- 243
Query: 613 LVAPHELHFQILH-------HLLKEHILGTPDYKVIVF---CSTGMVTSLLYLLLREMK- 661
P LH + + L + ++ D K+IVF C++ L+ + +K
Sbjct: 244 -KTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKS 302
Query: 662 MNVREMYSRKPQLYRDRISEEF-RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 720
+++ ++ Q RD+ F +AS +L T DV+ARG+D P + VVQ P D
Sbjct: 303 ISLIPIHGDMKQNARDKALASFTKASSGALLCT-DVAARGLDIPGIDYVVQYDPPQDPNM 361
Query: 721 YIHXXXXXXXXXXXXXXVLLLAPWEEYF 748
+ H ++ L P EE +
Sbjct: 362 FNHRAGRTARLGRQGRAIVFLLPKEEAY 389
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 394 (143.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 129/412 (31%), Positives = 195/412 (47%)
Query: 317 GSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRK----EISXXXXXXXXXXXXXXXX 372
G A+L K D K +P + DF ++ E +R E++
Sbjct: 64 GPGANLVKKDWKNETLIPFQK-----DFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVP 118
Query: 373 XPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
P+ + F+E G +K + G+ T +Q+ + G+D V + TG+GK+++
Sbjct: 119 KPVTT---FEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLS 175
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+ LPAI + S PI VL+L PTRELA QI E K+ I + G
Sbjct: 176 YCLPAIVHINAQPLLSPGD--GPI-VLVLAPTRELAVQIQQECTKFGKS-SRIRNTCVYG 231
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G R L +I +ATPGRLLD +++ L + LVLDEAD +LD+GF
Sbjct: 232 GVPRGPQIRDLIRG-VEICIATPGRLLDMLDSNK---TNLRRVTYLVLDEADRMLDMGFE 287
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYID-TVGLGSVETPVKIKQS 611
+ IVD + RQ+++FSAT PKEV+R+++ L + YI TVG + IKQ
Sbjct: 288 PQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYL---NDYIQVTVGSLDLAASHNIKQI 344
Query: 612 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 671
V + L ++E +L D KV++F T V + LR+ ++ K
Sbjct: 345 VEVVDNADKRARLGKDIEE-VLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDK 403
Query: 672 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q RD + EFR K I+V +DV++RG+D +T V P + E Y+H
Sbjct: 404 AQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVH 455
>MGI|MGI:2182303 [details] [associations]
symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
CleanEx:MM_DDX50 Genevestigator:Q99MJ9
GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
Length = 734
Score = 404 (147.3 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 109/349 (31%), Positives = 180/349 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L G + +Q T EGKD + +A+TGTGK+ +F +P IE
Sbjct: 136 FSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIER 195
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + P VL+L PTRELA+Q+A + + + + V GGT ++
Sbjct: 196 LQRNQETIKKSRSPK--VLVLAPTRELANQVAKDFKDITRK---LSVACFYGGTSYQSQI 250
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++ + ILV TPGR+ DH++ SG + L L+ +VLDE D +LDLGF + VE+I+
Sbjct: 251 NQIRNG-IDILVGTPGRIKDHLQ--SG-RLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIH 306
Query: 561 CLPR-----RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
+ Q+LLFSAT P+ V ++++ +K + +D VG + + ++ +
Sbjct: 307 ESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQC 366
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQL 674
++ +L+ + + + I+FC T VT + + +K N + ++ Q
Sbjct: 367 HWSQRPAVIGDVLQ--VYSGSEGRAIIFCETKKNVTEMA--MNPHIKQNAQCLHGDIAQS 422
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 423 QREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 471
>UNIPROTKB|E1BW15 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0043330 GeneTree:ENSGT00680000100003 OMA:EILCVAY
EMBL:AADN02028009 IPI:IPI00582179 Ensembl:ENSGALT00000006591
Uniprot:E1BW15
Length = 693
Score = 403 (146.9 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 114/349 (32%), Positives = 182/349 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TI+ L A G + VQ T + GKD + +A+TGTGK+ +F +P IE
Sbjct: 115 FSNFPISKGTIQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQARTGTGKTFSFAIPLIEK 174
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
L+A S + P VL+L PTRELA+Q+A + + + + V GGT + Q
Sbjct: 175 -LQADSQERRRGRSP-KVLVLAPTRELANQVAKDFKDITRK---LTVACFYGGTPYN-GQ 228
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L ILV TPGR+ DH++N G + L +K +VLDE D +LD+GF + VE+I+
Sbjct: 229 IDLIRSGIDILVGTPGRIKDHLQN--G-KLDLTKVKHVVLDEVDQMLDMGFAEQVEDILR 285
Query: 561 CLPRRR-----QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
++ Q+LLFSAT P V +++ +K ++ +D +G + + ++ +
Sbjct: 286 VAYKKDSEDNPQTLLFSATCPNWVYDVAKKYMKSKYEQVDLIGRKTQKAATTVEHLAIEC 345
Query: 616 PHELHFQILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
++ +++ + + Y + IVFC T + L L +K + + ++ PQ
Sbjct: 346 HWSQRAAVIGDVIQVY---SGSYGRTIVFCETKKDANEL-ALNASIKQDCQSLHGDIPQK 401
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V VVQ P D E YIH
Sbjct: 402 QREITLKGFRNGAFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIH 450
>UNIPROTKB|F1SUG8 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
Length = 737
Score = 404 (147.3 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 110/349 (31%), Positives = 179/349 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L G + +Q T EGKD + +A+TGTGK+ +F +P IE
Sbjct: 139 FSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIER 198
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + P VL+L PTRELA+Q+A + + K + V GGT ++
Sbjct: 199 LQRNQETIKKSRSPK--VLVLAPTRELANQVAKDFKDITKK---LSVACFYGGTSYQSQI 253
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + ILV TPGR+ DH++ SG + L L+ +VLDE D +LDLGF + VE+I+
Sbjct: 254 NHIRNG-IDILVGTPGRIKDHLQ--SG-RLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIH 309
Query: 561 CLPR-----RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
+ Q+LLFSAT P+ V ++++ +K + +D VG + + ++ +
Sbjct: 310 ESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQC 369
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQL 674
++ +L+ + + + I+FC T VT + + +K N + ++ Q
Sbjct: 370 HWSQRPAVIGDVLQ--VYSGSEGRAIIFCETKKNVTEMA--MNPHIKQNAQCLHGDIAQS 425
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 426 QREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 474
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 388 (141.6 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 100/343 (29%), Positives = 173/343 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+ P I A G+ + +Q ++ L+G+D + A+TG+GK+ AF++P ++
Sbjct: 121 FESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQK 180
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+A ++ L L PTRELA QIA + A+ + G+ LVGG
Sbjct: 181 LLEAPQG--------LFCLALAPTRELAYQIADQFNAI-GSTIGVKTCVLVGGIDSMSQS 231
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P ++V +PGR+L H+E+ G ++R +K ++DEAD L F ++V NI+
Sbjct: 232 LALAKKP-HVVVGSPGRVLHHLEHTKGFNLR--SIKYFIMDEADRLFSADFEEEVNNILK 288
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P+ R + LFSATM +V ++ + L + +T + Q L P +
Sbjct: 289 VIPKERNTYLFSATMTSKVAKLQRASLVNP---VKVQVASKYQTVDTLLQQYLFVPFKYK 345
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
L ++L E + G I+F ST ++ + ++LR + + Q R
Sbjct: 346 DCYLAYILNE-LAGN---LTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASL 401
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F+ + ILV +DV+ARG+D P V V+ +P + ++Y+H
Sbjct: 402 NKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVH 444
Score = 42 (19.8 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 320 ASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEI 355
++L + +I K+V +K E++ EE+ E +++EI
Sbjct: 35 STLTEKPKQIVKKV-IKKQEEKEVKEEEEEEVKEEI 69
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 408 (148.7 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 108/350 (30%), Positives = 188/350 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 291 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 350
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 351 MMHDGITASCFKELQEP-ECIIVAPTRELVNQIYLEA-RKFSFGTCVRAVVIYGGTQLGH 408
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 409 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRMLDMGFGPEMKKL 464
Query: 559 VDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVK-IKQSCL 613
+ C +P + RQ+L+FSAT P+E++R++ LK + + V +G V + ++Q+ L
Sbjct: 465 ISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLF---VAVGQVGGACRDVQQTVL 521
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 522 QVGQFSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 577
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 578 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 627
Score = 38 (18.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 240 DKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRF 284
+K + +G F R ++ E D + + K F R F
Sbjct: 22 EKDRYSSGENGDNFNRTPTSSSEMDDGPSRRDHFMKSGFASGRNF 66
>RGD|1304895 [details] [associations]
symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 31"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304895
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000075041
EMBL:CH474001 UniGene:Rn.63648 Ensembl:ENSRNOT00000064323
Uniprot:G3V9V8
Length = 682
Score = 341 (125.1 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 98/300 (32%), Positives = 160/300 (53%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ S + F E + P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 99 VFSPEAFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 158
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A +S + P Y L+L PTRELA Q LLK I L+GG
Sbjct: 159 CIPVVQS-LQALTSKIQRSDGP-YALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 216
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ ++ LV+DEAD +LDLGF K
Sbjct: 217 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFNRVRWLVVDEADRILDLGFEK 273
Query: 554 DVE---NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKR-------EHTY-------IDT 596
DV N V+ ++RQ++L SAT+ + V R++ + L + ++ + +
Sbjct: 274 DVTVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHNPVSISVLDKSWDQPNPKEVAS 333
Query: 597 VGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 656
+ L S P + Q ++ P +L L + + D K+IVF S+ + Y L
Sbjct: 334 IQLDSFAIPESLDQYVVLVPSKLRLVCLAAFILKKCKFEKDQKMIVFFSSCELVEFHYNL 393
Score = 110 (43.8 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 667 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXX 726
++ Q R + EF S +L+ +DV++RG+D P VT +VQ P +YIH
Sbjct: 422 LHGNMKQEERTSVFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEYIHRIG 481
Query: 727 XXXXXXXXXXXVLLLAPWE-EY 747
+L+LAP E EY
Sbjct: 482 RTARIGCHGSSLLILAPSEAEY 503
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 381 (139.2 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 104/343 (30%), Positives = 173/343 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F ++ + L GY Q T +Q + A L +D + A+TGTGK+ AF LP ++
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L A + S I L+L PTRELA Q+ + K D I V GG + Q
Sbjct: 62 LLMADNQSD-HAAKAIRALVLVPTRELALQVQQSFVKYAKGTD-IRVGIAYGGVSIEAQQ 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ +L+ATPGRLLDH+ + G ++ L L LV DEAD +LD+GF +++ ++
Sbjct: 120 AVFNAG-IDVLIATPGRLLDHL--RQG-ALNLNQLNTLVFDEADRMLDMGFMDEIQAVLK 175
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P +RQ+LLFSAT+ + S+ +L R+ I+ + T +I+Q +
Sbjct: 176 QVPAQRQTLLFSATLDDSIFSFSKNLL-RDPKRIEVAKPNT--TAAQIEQRVYAIDSDRK 232
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
+ + HL++ +V++F T L L ++ + + + Q R+++
Sbjct: 233 TEFVSHLVRSKNW----QQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVL 288
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+EF+ +LV +DV+ARG+D ++ V+ +P E YIH
Sbjct: 289 QEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIH 331
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 381 (139.2 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 104/343 (30%), Positives = 173/343 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F ++ + L GY Q T +Q + A L +D + A+TGTGK+ AF LP ++
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L A + S I L+L PTRELA Q+ + K D I V GG + Q
Sbjct: 62 LLMADNQSD-HAAKAIRALVLVPTRELALQVQQSFVKYAKGTD-IRVGIAYGGVSIEAQQ 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ +L+ATPGRLLDH+ + G ++ L L LV DEAD +LD+GF +++ ++
Sbjct: 120 AVFNAG-IDVLIATPGRLLDHL--RQG-ALNLNQLNTLVFDEADRMLDMGFMDEIQAVLK 175
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+P +RQ+LLFSAT+ + S+ +L R+ I+ + T +I+Q +
Sbjct: 176 QVPAQRQTLLFSATLDDSIFSFSKNLL-RDPKRIEVAKPNT--TAAQIEQRVYAIDSDRK 232
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
+ + HL++ +V++F T L L ++ + + + Q R+++
Sbjct: 233 TEFVSHLVRSKNW----QQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVL 288
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+EF+ +LV +DV+ARG+D ++ V+ +P E YIH
Sbjct: 289 QEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIH 331
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 402 (146.6 bits), Expect = 2.4e-34, P = 2.4e-34
Identities = 116/347 (33%), Positives = 179/347 (51%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F++CG S + A+ Y + T +Q L L G+D + AKTG+GK+ AF+LP I
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ + PI V I PTRELA QI EA K + G+ V + GG
Sbjct: 288 VHIMDQPELQRDE--GPIGV-ICAPTRELAHQIFLEAKKFSKAY-GLRVSAVYGGMSKHE 343
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L++ C+I+VATPGRL+D ++ K+ + +M LVLDEAD + DLGF V +I
Sbjct: 344 QFKELKAG-CEIVVATPGRLIDMLKMKA---LTMMRASYLVLDEADRMFDLGFEPQVRSI 399
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSVETPVKIKQSCLVAPH 617
V + RQ+LLFSATMP +V ++++ +L + VG+ + + I Q V P
Sbjct: 400 VGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANED----ITQVVNVIPS 455
Query: 618 ELHFQILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ + L LL E + G D V+VF S + L V ++ K Q R
Sbjct: 456 DA--EKLPWLL-EKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASR 512
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
++F++ +L+ +DV+ARG+D + +VV I D + ++H
Sbjct: 513 METLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVH 559
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 396 (144.5 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 130/420 (30%), Positives = 201/420 (47%)
Query: 312 DVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKE---ISXXXXXXXXXXXX 368
D + S S+ K K+ KS + D EE+V+ KE +S
Sbjct: 43 DSEVESKSKSIKKSSKSEEKKSEKKSSSSKEDKEEEVKEETKEDIVLSPTEWRKKHNVLI 102
Query: 369 XXXXXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTG 428
P QK F + P + + G+ T +Q + L G D V A TG+G
Sbjct: 103 EGKSQPNPFQK-FTDYEF-PRMFQHIFQ-GFTAPTVIQGQSWPIILGGNDLVGLAATGSG 159
Query: 429 KSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
K++AFLLPA+ ++ + P VL++ PTRELA QI ++ I L
Sbjct: 160 KTLAFLLPALLKIISLPKRPSYGATP--LVLVMAPTRELAQQIEEVCKTSIRG-TSIRQL 216
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
GG K+DQ R+ + I++ TPGRL D + K LS ++ LVLDEAD +LD
Sbjct: 217 CAYGGLG-KIDQSRILRNGVDIVIGTPGRLNDLLR-KHHLS----SVQYLVLDEADRMLD 270
Query: 549 LGFRKDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKI 608
+GF +E+++D +P+ RQ+L+FSAT PKEV+ ++ LK + I TVG + + +
Sbjct: 271 MGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLK-DPIKI-TVGSQELTGSINV 328
Query: 609 KQSCLVAPHELHFQ---ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR 665
Q + Q +++ + + + P VIVFC+ L K NV+
Sbjct: 329 TQHIVNIDDLSDLQSDDLIYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLSTQK-NVK 387
Query: 666 E--MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
++S K Q R+ + FR + IL+ +DV+ARG+D P V +V +P + E Y+H
Sbjct: 388 SIVLHSGKDQRMRESGLKLFRDHRIRILIATDVAARGLDIPSVKAVFNYRLPGNIEDYVH 447
>UNIPROTKB|E2RPT4 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
EMBL:AAEX03002786 Ensembl:ENSCAFT00000038045 Uniprot:E2RPT4
Length = 687
Score = 400 (145.9 bits), Expect = 2.7e-34, P = 2.7e-34
Identities = 109/349 (31%), Positives = 179/349 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L G + +Q T EGKD + +A+TGTGK+ +F +P IE
Sbjct: 141 FSNFPISEETIKLLKGRGVSYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIER 200
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + P VL+L PTRELA+Q+A + + + + V GGT ++
Sbjct: 201 LQRNQETIKKSRSPK--VLVLAPTRELANQVAKDFKDITRK---LSVACFYGGTSYQSQI 255
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + ILV TPGR+ DH++ SG + L L+ +VLDE D +LDLGF + VE+I+
Sbjct: 256 NHIRNG-IDILVGTPGRIKDHLQ--SG-RLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIH 311
Query: 561 CLPR-----RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
+ Q+LLFSAT P+ V ++++ +K + +D VG + + ++ +
Sbjct: 312 ESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQC 371
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQL 674
++ +L+ + + + I+FC T VT + + +K N + ++ Q
Sbjct: 372 HWSQRPAVIGDVLQ--VYSGSEGRAIIFCETKKNVTEMA--MNPHIKQNAQCLHGDIAQS 427
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 428 QREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 476
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 380 (138.8 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 94/269 (34%), Positives = 149/269 (55%)
Query: 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLT--LVGGTRFKVDQRRLESDPCQILVAT 514
+ L+L PTRELA QI + AL GIG++ +VGG L P I+VAT
Sbjct: 114 FCLVLTPTRELAFQIGQQFEAL---GSGIGLIAAVIVGGVDMAAQAMALARRP-HIIVAT 169
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSAT 574
PGRL+DH+EN G +++ LK L++DEAD +L++ F +++ I+ +PR R++ LFSAT
Sbjct: 170 PGRLVDHLENTKGFNLK--ALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSAT 227
Query: 575 MPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILG 634
M K+V ++ + L R+ + +T +KQ + P++ L +LL EH G
Sbjct: 228 MTKKVSKLERASL-RDPARVSVSS--RYKTVDNLKQHYIFVPNKYKETYLVYLLNEHA-G 283
Query: 635 TPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTS 694
IVFC+T T + ++LR++ M ++ + Q R +F++ R ILV +
Sbjct: 284 N---SAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCT 340
Query: 695 DVSARGMDYPDVTSVVQVGIPPDREQYIH 723
DV+ARG+D P V V+ +P + Y+H
Sbjct: 341 DVAARGLDIPHVDMVINYDMPSQSKDYVH 369
Score = 364 (133.2 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 95/301 (31%), Positives = 161/301 (53%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ +K F E G+S A G+++ +++Q+A L L+GKD + A+TG+GK+ AF +
Sbjct: 41 VKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAI 100
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--LVGG 493
P ++++L + + L+L PTRELA QI + AL GIG++ +VGG
Sbjct: 101 PVLQSLLDHPQA--------FFCLVLTPTRELAFQIGQQFEAL---GSGIGLIAAVIVGG 149
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
L P I+VATPGRL+DH+EN G +++ LK L++DEAD +L++ F
Sbjct: 150 VDMAAQAMALARRP-HIIVATPGRLVDHLENTKGFNLK--ALKFLIMDEADRILNMDFEV 206
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL 613
+++ I+ +PR R++ LFSATM K+V ++ + L R+ + +T +KQ +
Sbjct: 207 ELDKILKVIPRERRTYLFSATMTKKVSKLERASL-RDPARVSVSS--RYKTVDNLKQHYI 263
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
P++ L +LL EH G C+T M +++ L + + S++ +
Sbjct: 264 FVPNKYKETYLVYLLNEHA-GNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKR 322
Query: 674 L 674
L
Sbjct: 323 L 323
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 380 (138.8 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 106/351 (30%), Positives = 175/351 (49%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+++ +F + G+ P I L G++ T +Q L L G+D +A+TGTGK++AFL
Sbjct: 6 ITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLT 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ P +I+ PTRELA QI +A LL + G+ GG
Sbjct: 66 ATFNHLLTTPAAEGRAETQP-RAIIMAPTRELAIQIFNDAEPLLAS-TGLKAALAYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ +L+S IL+ T GR++D + + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDKQLAKLQSG-VDILIGTTGRIIDFYKQRV---FNLNHIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLP--RRRQSLLFSATMPKEVRRIS-QLVLKREHTYIDTVGLGSVETPVKIKQSC 612
+ +P + R ++LFSAT+ V+ ++ + + EH ++ +T +I++
Sbjct: 180 RFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEP----EQKTGHRIQEEL 235
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+E +L L++E PD + I+F +T ++ L V + P
Sbjct: 236 FYPSNEHKMALLQTLIEEE---WPD-RAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVP 291
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R+RI E+F ILV +DV+ARG+ P VT V +P D E Y+H
Sbjct: 292 QKKRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVH 342
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 380 (138.8 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 106/351 (30%), Positives = 175/351 (49%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+++ +F + G+ P I L G++ T +Q L L G+D +A+TGTGK++AFL
Sbjct: 6 ITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLT 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ P +I+ PTRELA QI +A LL + G+ GG
Sbjct: 66 ATFNHLLTTPAAEGRAETQP-RAIIMAPTRELAIQIFNDAEPLLAS-TGLKAALAYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ +L+S IL+ T GR++D + + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDKQLAKLQSG-VDILIGTTGRIIDFYKQRV---FNLNHIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLP--RRRQSLLFSATMPKEVRRIS-QLVLKREHTYIDTVGLGSVETPVKIKQSC 612
+ +P + R ++LFSAT+ V+ ++ + + EH ++ +T +I++
Sbjct: 180 RFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEP----EQKTGHRIQEEL 235
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+E +L L++E PD + I+F +T ++ L V + P
Sbjct: 236 FYPSNEHKMALLQTLIEEE---WPD-RAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVP 291
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R+RI E+F ILV +DV+ARG+ P VT V +P D E Y+H
Sbjct: 292 QKKRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVH 342
>UNIPROTKB|Q9BQ39 [details] [associations]
symbol:DDX50 "ATP-dependent RNA helicase DDX50"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
Length = 737
Score = 401 (146.2 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 109/349 (31%), Positives = 179/349 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L G + +Q T EGKD + +A+TGTGK+ +F +P IE
Sbjct: 139 FSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIER 198
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + P VL+L PTRELA+Q+A + + + + V GGT ++
Sbjct: 199 LQRNQETIKKSRSPK--VLVLAPTRELANQVAKDFKDITRK---LSVACFYGGTSYQSQI 253
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + ILV TPGR+ DH++ SG + L L+ +VLDE D +LDLGF + VE+I+
Sbjct: 254 NHIRNG-IDILVGTPGRIKDHLQ--SG-RLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIH 309
Query: 561 CLPR-----RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
+ Q+LLFSAT P+ V ++++ +K + +D VG + + ++ +
Sbjct: 310 ESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQC 369
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQL 674
++ +L+ + + + I+FC T VT + + +K N + ++ Q
Sbjct: 370 HWSQRPAVIGDVLQ--VYSGSEGRAIIFCETKKNVTEMA--MNPHIKQNAQCLHGDIAQS 425
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 426 QREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 474
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 379 (138.5 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 113/350 (32%), Positives = 188/350 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++ KAL TRVQ+ + A L G+D + ++TG+GK+ AF LP ++
Sbjct: 19 FAELGLNAALRKALPTR-LKHPTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLLQI 77
Query: 441 VLKATSSSTT-QLVP---PIYVLILCPTRELASQI--AAEAIAL-LKNHDGIGVLTLVGG 493
+ + + TT + VP P+ L+L PTRELA Q+ A A+A L + + L GG
Sbjct: 78 LWQQIAVQTTAKSVPAAKPL-ALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGG 136
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ L + P Q++VATPGRLLD + +S +S L +K LVLDEAD LL++GF
Sbjct: 137 VALEQQLADLSAKP-QLVVATPGRLLD-LCTQSHIS--LDAIKHLVLDEADRLLEMGFWP 192
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL 613
D++ ++ +P+R+Q+LLFSAT+P+ + ++ +L + ++ +V ++ +Q L
Sbjct: 193 DMQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIE-EQLYL 251
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
V Q L LLK++ P +V+VF S + L + +N ++ K Q
Sbjct: 252 VNKGS-KAQALIALLKQY--QWP--QVLVFISARDDADAIAKRLVKAGINAAALHGEKDQ 306
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R + +F+A + +LV +D+ ARG+ + V+ + +P Y+H
Sbjct: 307 TVRSQTLADFKADRIQVLVATDLMARGIHVDALPVVINLDLPTSAPVYVH 356
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 379 (138.5 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 113/350 (32%), Positives = 188/350 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++ KAL TRVQ+ + A L G+D + ++TG+GK+ AF LP ++
Sbjct: 19 FAELGLNAALRKALPTR-LKHPTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLLQI 77
Query: 441 VLKATSSSTT-QLVP---PIYVLILCPTRELASQI--AAEAIAL-LKNHDGIGVLTLVGG 493
+ + + TT + VP P+ L+L PTRELA Q+ A A+A L + + L GG
Sbjct: 78 LWQQIAVQTTAKSVPAAKPL-ALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGG 136
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ L + P Q++VATPGRLLD + +S +S L +K LVLDEAD LL++GF
Sbjct: 137 VALEQQLADLSAKP-QLVVATPGRLLD-LCTQSHIS--LDAIKHLVLDEADRLLEMGFWP 192
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL 613
D++ ++ +P+R+Q+LLFSAT+P+ + ++ +L + ++ +V ++ +Q L
Sbjct: 193 DMQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIE-EQLYL 251
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
V Q L LLK++ P +V+VF S + L + +N ++ K Q
Sbjct: 252 VNKGS-KAQALIALLKQY--QWP--QVLVFISARDDADAIAKRLVKAGINAAALHGEKDQ 306
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R + +F+A + +LV +D+ ARG+ + V+ + +P Y+H
Sbjct: 307 TVRSQTLADFKADRIQVLVATDLMARGIHVDALPVVINLDLPTSAPVYVH 356
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 379 (138.5 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 105/347 (30%), Positives = 171/347 (49%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S F+ G++ ++ G + T VQ + L G+D + A+TG+GK+ AF LP
Sbjct: 56 SATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALP 115
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ + + ++ L++ PTRELA Q+A E L + + +VGG
Sbjct: 116 ILHRLAEDPYG--------VFALVVTPTRELAFQLA-EQFKALGSCLNLRCSVIVGGMDM 166
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
L S P I++ TPGR+ +EN + K LVLDEAD +LD+GF+ ++
Sbjct: 167 LTQTMSLVSRP-HIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELR 225
Query: 557 NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 616
I CLP+ RQ+LLFSATM ++ + + + + Y GL +V+T + Q +
Sbjct: 226 TIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDT---LTQQFIFED 282
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
+ L H+L + + ++F ST L L+L E+++ M+S Q R
Sbjct: 283 KDAKELYLVHILSQ-MEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMR 341
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+F++ K IL+ +DV++RG+D P V V+ IP D Y+H
Sbjct: 342 LSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVH 388
>UNIPROTKB|E2QTT0 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
Length = 738
Score = 400 (145.9 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 109/349 (31%), Positives = 179/349 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L G + +Q T EGKD + +A+TGTGK+ +F +P IE
Sbjct: 140 FSNFPISEETIKLLKGRGVSYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIER 199
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + P VL+L PTRELA+Q+A + + + + V GGT ++
Sbjct: 200 LQRNQETIKKSRSPK--VLVLAPTRELANQVAKDFKDITRK---LSVACFYGGTSYQSQI 254
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + ILV TPGR+ DH++ SG + L L+ +VLDE D +LDLGF + VE+I+
Sbjct: 255 NHIRNG-IDILVGTPGRIKDHLQ--SG-RLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIH 310
Query: 561 CLPR-----RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
+ Q+LLFSAT P+ V ++++ +K + +D VG + + ++ +
Sbjct: 311 ESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQC 370
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQL 674
++ +L+ + + + I+FC T VT + + +K N + ++ Q
Sbjct: 371 HWSQRPAVIGDVLQ--VYSGSEGRAIIFCETKKNVTEMA--MNPHIKQNAQCLHGDIAQS 426
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 427 QREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 475
>UNIPROTKB|F1SUG7 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
OMA:EILCVAY EMBL:CT737244 EMBL:CU468175 Ensembl:ENSSSCT00000011217
Uniprot:F1SUG7
Length = 855
Score = 401 (146.2 bits), Expect = 4.5e-34, P = 4.5e-34
Identities = 114/375 (30%), Positives = 181/375 (48%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L A G + +Q T GKD + +A+TGTGK+ +F +P IE
Sbjct: 260 FSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEK 319
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF--KV 498
+ P VL+L PTRELASQ++ + + K + V GGT + ++
Sbjct: 320 LQGELQDRKRGRAPQ--VLVLAPTRELASQVSRDFSDITKK---LAVACFYGGTPYGGQI 374
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
D+ R D ILV TPGR+ DH++N + L LK +VLDE D +LD+GF VE I
Sbjct: 375 DRMRNGID---ILVGTPGRIKDHLQNNK---LDLTKLKHVVLDEVDQMLDMGFADQVEEI 428
Query: 559 VDCLPRRR------QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC 612
+ C+ ++ Q+LLFSAT P V +++ +K + +D +G + +T + ++
Sbjct: 429 L-CVAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLA 487
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+ ++ +++ + + I+FC T L ++ + + ++ P
Sbjct: 488 IKCHWTQRAAVIGDVIR--VYSGYQGRTIIFCETKKEAQELSQNAA-VRQDAQSLHGDIP 544
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 732
Q R+ + FR +LV ++V+ARG+D P+V VVQ P D E YIH
Sbjct: 545 QKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAG 604
Query: 733 XXXXXVLLLAPWEEY 747
+ EEY
Sbjct: 605 RTGICICFYQHKEEY 619
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 378 (138.1 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 109/374 (29%), Positives = 194/374 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +KA+T + Y + T +Q+ ++ L D + +A+TGTGK+ AF LP ++
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG--TRFKV 498
++ S P + L+L PTRELA Q+ ++ + + GG T+ ++
Sbjct: 67 LI-----SVQPCKPELRALVLTPTRELAQQVH-KSFCHYGQFTDVTIGIAYGGVSTKKQI 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ ++ D IL+ATPGRLLD + +S V L ++ LV DEAD +LD+GF+++++ I
Sbjct: 121 SELKVGVD---ILIATPGRLLDLLRTES---VSLSNIETLVFDEADRMLDMGFKEEIDQI 174
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVL-KREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
LP+ +Q+LLFSAT ++ ++S+ +L + + ID + + ++Q LV
Sbjct: 175 TQYLPKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADD----VEQ--LVYGV 228
Query: 618 ELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREM-KMNVREM--YSRKPQ 673
+ + L ++G+ ++K V+VF T L +EM K V+ + + K Q
Sbjct: 229 DADRK---RELTSFLIGSRNWKQVLVFTRTKQCADDL---AKEMTKDGVKSLAIHGDKSQ 282
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXX 733
R++ EF+ K L+ +DV+ARG+D ++ V+ +P + E Y+H
Sbjct: 283 GAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGN 342
Query: 734 XXXXVLLLAPWEEY 747
V L++P EE+
Sbjct: 343 SGLAVSLVSPGEEW 356
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 378 (138.1 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 109/374 (29%), Positives = 194/374 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +KA+T + Y + T +Q+ ++ L D + +A+TGTGK+ AF LP ++
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG--TRFKV 498
++ S P + L+L PTRELA Q+ ++ + + GG T+ ++
Sbjct: 67 LI-----SVQPCKPELRALVLTPTRELAQQVH-KSFCHYGQFTDVTIGIAYGGVSTKKQI 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ ++ D IL+ATPGRLLD + +S V L ++ LV DEAD +LD+GF+++++ I
Sbjct: 121 SELKVGVD---ILIATPGRLLDLLRTES---VSLSNIETLVFDEADRMLDMGFKEEIDQI 174
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVL-KREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
LP+ +Q+LLFSAT ++ ++S+ +L + + ID + + ++Q LV
Sbjct: 175 TQYLPKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADD----VEQ--LVYGV 228
Query: 618 ELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREM-KMNVREM--YSRKPQ 673
+ + L ++G+ ++K V+VF T L +EM K V+ + + K Q
Sbjct: 229 DADRK---RELTSFLIGSRNWKQVLVFTRTKQCADDL---AKEMTKDGVKSLAIHGDKSQ 282
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXX 733
R++ EF+ K L+ +DV+ARG+D ++ V+ +P + E Y+H
Sbjct: 283 GAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGN 342
Query: 734 XXXXVLLLAPWEEY 747
V L++P EE+
Sbjct: 343 SGLAVSLVSPGEEW 356
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 400 (145.9 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 113/366 (30%), Positives = 181/366 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +S ++ LT+ G+ + T +Q T+ L GKD V A TG+GK+ AF++P +E
Sbjct: 257 FQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILER 316
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L VP V+IL PTRELA Q A A L +H I VGG KV +
Sbjct: 317 LLYRPKK-----VPTSRVVILAPTRELAIQCHAVATKLA-SHTDIKFCLAVGGLSLKVQE 370
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P +++ATPGR +DH+ N + +V + ++LVLDEAD +L+ GF ++ I+
Sbjct: 371 SELRLRP-DVIIATPGRFIDHMRNSASFAVDTV--EILVLDEADRMLEDGFADELNEILT 427
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSVETPVKIKQSCL-VAP-- 616
LP+ RQ++LFSATM V + ++ L + +D+ +T V + Q + + P
Sbjct: 428 TLPKSRQTMLFSATMTSSVDNLIRVGLNKPVRLMVDS----QKKTVVTLTQEFVRLRPGR 483
Query: 617 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 676
E L +L K L T +VI+F + ++ + ++ E++ Q+ R
Sbjct: 484 EEKRMGYLVYLCKN--LYTE--RVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQIQR 539
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 736
+ E FR K L+ +D+++RG+D V +V+ P E Y+H
Sbjct: 540 IQSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGT 599
Query: 737 XVLLLA 742
+ L A
Sbjct: 600 AITLAA 605
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 394 (143.8 bits), Expect = 4.7e-34, P = 4.7e-34
Identities = 114/346 (32%), Positives = 178/346 (51%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + ++A+ G+ + T +Q L+G+D + A+TG+GK++A+LLPA+
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIAL-LKNHDGIGVLTLVGGTRFK 497
V + Q PI VLIL PTRELA QI E+ L++ G+ + GG K
Sbjct: 225 VHV--SAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKFGLRS--GVRSTCIYGGAP-K 278
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
Q R +I++ATPGRL+D +E + L + LVLDEAD +LD+GF +
Sbjct: 279 GPQIRDLRRGVEIVIATPGRLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRK 335
Query: 558 IVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 617
IV + RQ+LL+SAT P+EV +++ L+ + I +G ++ I Q + P
Sbjct: 336 IVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAI--IGSTDLKANQSINQVIEIVPT 393
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
+ L LLK+ + G+ K+++F T + LR ++ K Q RD
Sbjct: 394 PEKYNRLLTLLKQLMDGS---KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERD 450
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ EF++ + I+ +DV+ARG+D D+ VV P E YIH
Sbjct: 451 RVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIH 496
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 396 (144.5 bits), Expect = 4.9e-34, P = 4.9e-34
Identities = 113/332 (34%), Positives = 171/332 (51%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458
Y++ T VQ + LEG+D + A+TG+GK+ AF P I ++K + +Y
Sbjct: 179 YVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYP 238
Query: 459 L--ILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPG 516
L IL PTRELASQI EA G+ V+ GGT R LE ILVATPG
Sbjct: 239 LAVILSPTRELASQIHDEA-KKFSYQTGVKVVVAYGGTPINQQLRELERG-VDILVATPG 296
Query: 517 RLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV---DCLPRR-RQSLLFS 572
RL D +E ++ +S+++ ++ L LDEAD +LD+GF + IV D PR RQ+LLFS
Sbjct: 297 RLNDLLE-RARVSMQM--IRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFS 353
Query: 573 ATMPKEVRRISQLVLKREHTYIDTVGLGS-VETPVKIKQSCLVAPHELHFQILHHLLKEH 631
AT P+E++R++ L + ++ +GS + V+ + L + H L H +E+
Sbjct: 354 ATFPREIQRLAADFLAN-YIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQREN 412
Query: 632 ILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLIL 691
+ +VF T L L ++ + Q R+ + F++ + IL
Sbjct: 413 GIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPIL 472
Query: 692 VTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
V +DV+ARG+D P V VV +P D + Y+H
Sbjct: 473 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 504
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 391 (142.7 bits), Expect = 5.5e-34, P = 5.5e-34
Identities = 111/344 (32%), Positives = 176/344 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE G ++ + G+ + T +Q L G+D + A TG+GK++++ LP+I
Sbjct: 129 FDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVH 188
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + Q VL+L PTRELA QI E K+ I + GG K Q
Sbjct: 189 I---NAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKS-SRIRNTCVYGGAP-KGPQ 243
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R + +I +ATPGRL+D +E +G L + LVLDEAD +LD+GF + IVD
Sbjct: 244 IRDLARGVEICIATPGRLIDMLE--AG-KTNLKRVTYLVLDEADRMLDMGFEPQIRKIVD 300
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKRE-HTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
+ RQ+L++SAT PKEV+++++ L I ++ L + T ++ + ++
Sbjct: 301 QIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVE--VIDEFSK 358
Query: 620 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 679
+++ HL E L D K++VF ST + LR ++ K Q RD +
Sbjct: 359 RDRLVKHL--ESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWV 416
Query: 680 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+EFR K I+V +DV+ARG+D +T V+ +P + E Y+H
Sbjct: 417 LDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVH 460
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 381 (139.2 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 114/347 (32%), Positives = 171/347 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPH 617
VD + RQ+++FSAT P+ + +++ +L + I+ VG SV ++Q +V
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKP---IEVQVGGRSVVCS-DVEQQVIVIEE 602
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYR 676
E F L LL + VI+F LL L+R ++ Q R
Sbjct: 603 EKKFLKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDR 658
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
D I +F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 659 DSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 71 (30.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 32/139 (23%), Positives = 57/139 (41%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K N ++E D S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-TENRSRSKEKTDGGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|F1MMK3 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
Uniprot:F1MMK3
Length = 737
Score = 398 (145.2 bits), Expect = 6.0e-34, P = 6.0e-34
Identities = 109/349 (31%), Positives = 179/349 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L G + +Q T EGKD + +A+TGTGK+ +F +P IE
Sbjct: 139 FSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIER 198
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + P VL+L PTRELA+Q+A + + + + V GGT ++
Sbjct: 199 LQRNQETIKKSRSPK--VLVLAPTRELANQVAKDFKDVTRK---LSVACFYGGTSYQSQI 253
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + ILV TPGR+ DH++ SG + L L+ +VLDE D +LDLGF + VE+I+
Sbjct: 254 NHIRNG-IDILVGTPGRIKDHLQ--SG-RLDLSKLRHVVLDEVDQMLDLGFAEQVEDILH 309
Query: 561 CLPR-----RRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
+ Q+LLFSAT P+ V ++++ +K + +D VG + + ++ +
Sbjct: 310 ESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQC 369
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQL 674
++ +L+ + + + I+FC T VT + + +K N + ++ Q
Sbjct: 370 HWSQRPAVIGDVLQ--VYSGSEGRAIIFCETKKNVTEMA--MNPHIKQNAQCLHGDIAQS 425
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 426 QREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIH 474
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 394 (143.8 bits), Expect = 6.1e-34, P = 6.1e-34
Identities = 114/339 (33%), Positives = 181/339 (53%)
Query: 388 PLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSS 447
P ++++ AG+ + T +Q + L+G D + A+TGTGK++++L+P + S
Sbjct: 210 PEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQPVS 269
Query: 448 STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ P + L+L PTRELA Q+ AE L + G+ + + GG K Q + +
Sbjct: 270 RKQRNGPGM--LVLTPTRELALQVEAECSKYL--YKGLKSVCIYGGGNRK-GQIQDVTKG 324
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV-DCLPRRR 566
I++ATPGRL D N V L + LVLDEAD +LDLGF + I+ D P R
Sbjct: 325 VDIIIATPGRLNDLQMNNF---VNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDR- 380
Query: 567 QSLLFSATMPKEVRRISQLVLKREH-TYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 625
Q+++ +A+ P RR++Q LK+ Y+ T+ L +V T +KQ+ +V E
Sbjct: 381 QTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNT---VKQNIIVTTEEEK----R 433
Query: 626 HLLKEHILG-TPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 684
L+KE + +P KVIVF S +V L L + V+ ++ + Q RD+ E+FR
Sbjct: 434 SLVKEFLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFR 493
Query: 685 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ IL+ +D++ARG+D DVT V P + E+Y+H
Sbjct: 494 TGRVKILIATDLAARGLDVSDVTHVYNYNFPRNIEEYVH 532
>UNIPROTKB|F1SV16 [details] [associations]
symbol:F1SV16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074980 EMBL:CU930036
Ensembl:ENSSSCT00000016375 OMA:SAREVPM Uniprot:F1SV16
Length = 301
Score = 376 (137.4 bits), Expect = 7.5e-34, P = 7.5e-34
Identities = 89/216 (41%), Positives = 132/216 (61%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDLPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEVRRISQLVLKR-EHTYI 594
+ LP++RQ+LLFSAT K V+ +++L LK E+ ++
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWV 276
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 377 (137.8 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 107/351 (30%), Positives = 177/351 (50%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++ K+F + G+ + L T VQ A + LEG D + A+TGTGK++AF +
Sbjct: 86 MTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAI 145
Query: 436 PAIEAVLKATSSSTTQLVPP--IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
P +L+ S V P IY LIL PTRELA QIA + AL K + +VGG
Sbjct: 146 P----ILQKLS------VDPYGIYALILTPTRELAFQIAEQFTALGKPIT-LKCSVIVGG 194
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMG-LKMLVLDEADHLLDLGFR 552
R + Q R S+ ++VATPGRL D IE+ ++ ++ VLDEAD +L+ +
Sbjct: 195 -RSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYN 253
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSC 612
++ I + + +RQ+LL SAT+ + + ++ ++ + + D G T +++Q
Sbjct: 254 DQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKPYFFEDK-GKDDESTVDRLEQKY 312
Query: 613 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 672
+V P + L +++K + P V++F T L + + V ++S+ P
Sbjct: 313 VVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIP 372
Query: 673 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
Q R FR+ +++ +DV++RG+D P V VV +P + YIH
Sbjct: 373 QKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIH 423
Score = 54 (24.1 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 80 DKADPDSETNQHKPMSPDEHVKALADRFMK-EGAEDLWNEDDGPVKSEQRPRSGAEANQ 137
D D + + Q KP + + VK + F + E ED+ +E+D ++ G E ++
Sbjct: 12 DDDDLEMDEEQEKPSTSSKSVKN--EEFEEFEDGEDVEDEEDEASDEDEEESEGEEGDE 68
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 381 (139.2 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 114/347 (32%), Positives = 171/347 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPH 617
VD + RQ+++FSAT P+ + +++ +L + I+ VG SV ++Q +V
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKP---IEVQVGGRSVVCS-DVEQQVIVIEE 602
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYR 676
E F L LL + VI+F LL L+R ++ Q R
Sbjct: 603 EKKFLKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDR 658
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
D I +F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 659 DSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 69 (29.3 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + G+K+K A N ++E + + S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGSKSKK-AENRSRSKEKAEGGDSSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 381 (139.2 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 114/347 (32%), Positives = 171/347 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPH 617
VD + RQ+++FSAT P+ + +++ +L + I+ VG SV ++Q +V
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKP---IEVQVGGRSVVCS-DVEQQVIVIEE 602
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYR 676
E F L LL + VI+F LL L+R ++ Q R
Sbjct: 603 EKKFLKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDR 658
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
D I +F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 659 DSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 69 (29.3 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + G+K+K A N ++E + + S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGSKSKK-AENRSRSKEKAEGGDSSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 375 (137.1 bits), Expect = 9.6e-34, P = 9.6e-34
Identities = 112/346 (32%), Positives = 181/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E + ++AL G+ + T +Q A + L+G+D + A TGTGK+ A+LLPA++
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L + PP +LIL PTRELA Q++ A L K H + + T+ GG + ++
Sbjct: 66 LLDFPRKKSG---PP-RILILTPTRELAMQVSDHARELAK-HTHLDIATITGGVAY-MNH 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ S+ I+VAT GRLL +I+ ++ R ++ L+LDEAD +LD+GF +D+E+I
Sbjct: 120 AEVFSENQDIVVATTGRLLQYIKEEN-FDCR--AVETLILDEADRMLDMGFAQDIEHIAG 176
Query: 561 CLPRRRQSLLFSATMPKE-VRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 619
R+Q+LLFSAT+ + ++ ++ +L+ ++ S KI Q A
Sbjct: 177 ETRWRKQTLLFSATLEGDAIQDFAERLLEDP---VEVSANPSTRERKKIHQWYYRADDLE 233
Query: 620 H-FQILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 677
H +L HLLK+ P+ + IVF L LRE +N + Q R+
Sbjct: 234 HKTALLVHLLKQ-----PEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRN 288
Query: 678 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ + +LV +DV+ARG+D PDV+ V +P + Y+H
Sbjct: 289 EAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH 334
>UNIPROTKB|F1N5H8 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:DAAA02032283
IPI:IPI00837660 UniGene:Bt.35580 ProteinModelPortal:F1N5H8
PRIDE:F1N5H8 Ensembl:ENSBTAT00000042916 Uniprot:F1N5H8
Length = 736
Score = 327 (120.2 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 93/282 (32%), Positives = 153/282 (54%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ + F + P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 128 VFTSDAFQALDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 187
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A S + P Y LIL PTRELA Q LLK I L+GG
Sbjct: 188 CIPVVQS-LQAMQSKIQRGDGP-YALILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 245
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ ++ L+LDEAD +LDLGF K
Sbjct: 246 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFRQIRWLILDEADRILDLGFEK 302
Query: 554 DVE---NIVDCLPRRRQSLLFSATMPKEVRRISQLVLKR--EHTYID-TVGLGSVETPVK 607
D+ N V+ + RQ++L SAT+ + V R++ + L + +D + + S E+
Sbjct: 303 DLTVILNAVNAECQERQNVLLSATLTEGVARLADISLHDPVSISVLDESHDVSSPESEAF 362
Query: 608 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 649
++ S A EL + L++H++ P K+ + C +
Sbjct: 363 LEASPPQATDELDGFAIPAGLEQHVVVVPS-KLRLVCLAAFI 403
Score = 120 (47.3 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 667 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXX 726
++S Q R + ++F SK IL +D++ARG+D P VT +VQ P +YIH
Sbjct: 460 LHSALEQEERTAVFQDFTHSKTGILFCTDIAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 519
Query: 727 XXXXXXXXXXXVLLLAPWE-EY 747
+L+LAP E EY
Sbjct: 520 RTARIGCHGSSLLVLAPSEAEY 541
Score = 50 (22.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 605 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 656
P ++Q +V P +L L + + D KVIVF S+ + Y L
Sbjct: 380 PAGLEQHVVVVPSKLRLVCLAAFILQKCKFERDQKVIVFFSSCELVEFHYTL 431
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 394 (143.8 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 117/354 (33%), Positives = 184/354 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E I I L G + + +Q L L G+D + A TG+GK++ F LP +
Sbjct: 224 FKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPMVLF 283
Query: 441 VLKATSS-STTQLVPPIYVLILCPTRELASQ----IAAEAIALLKN--HDGIGVLTLVGG 493
L+ Q P + LILCP+RELA Q + + AL KN H + L +GG
Sbjct: 284 ALEEECKLPIIQGEGP-FGLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIGG 342
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ +Q + +++ATPGRLLD + NK ++ +L K L LDEAD L+DLGF
Sbjct: 343 IDLR-EQEHIFKKGVHMIIATPGRLLDLL-NKKKINFKLC--KYLGLDEADRLIDLGFED 398
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEVRRI--SQLVLKREHTYIDTVGLGSVETPVKIKQS 611
D+ +++D +RQ+LLFSATMPK+++ S LVL E + G ++ +++
Sbjct: 399 DIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVE-VNVGRAGAANLNVTQEVE-- 455
Query: 612 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLL-YLLLREMKMNVREMYS 669
V P +L L K TP V++FC V + YLLL++++ ++
Sbjct: 456 -FVKPEAKIVYLLECLQK-----TPP-PVLIFCENKKDVDDIYEYLLLKQVE--AVSIHG 506
Query: 670 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
K Q R+ + FR K+ +LV +DV+++G+D+P++ V+ +P + E YIH
Sbjct: 507 DKSQDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIH 560
>UNIPROTKB|P0A8J8 [details] [associations]
symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
Uniprot:P0A8J8
Length = 421
Score = 374 (136.7 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 114/374 (30%), Positives = 183/374 (48%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L++++F + + P ++AL G+ T +Q L L G+D +A+TGTGK++AFL
Sbjct: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L + + ++ P LI+ PTRELA QI A+A L + G+ + GG
Sbjct: 66 STFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGDG 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + LES IL+ T GRL+D+ + + L ++++VLDEAD + DLGF KD+
Sbjct: 124 YDKQLKVLESG-VDILIGTTGRLIDYAKQNH---INLGAIQVVVLDEADRMYDLGFIKDI 179
Query: 556 ENIVDCLP--RRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCL 613
+ +P +R ++LFSAT+ VR ++ + YI+ +T +IK+
Sbjct: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAE-YIEVEP--EQKTGHRIKEELF 236
Query: 614 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 673
+E ++L L++E PD + I+F +T ++ L V + Q
Sbjct: 237 YPSNEEKMRLLQTLIEEE---WPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQ 292
Query: 674 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXX 733
R RI +EF ILV +DV+ARG+ P VT V +P D E Y+H
Sbjct: 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352
Query: 734 XXXXVLLLAPWEEY 747
+ L EEY
Sbjct: 353 SGHSISLAC--EEY 364
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 374 (136.7 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 112/345 (32%), Positives = 173/345 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +C + AL + + T +Q L G+D V A+TG+GK++A+LLPAI
Sbjct: 92 FHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVH 151
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ PI L+L PTRELA Q+ A K + + GG
Sbjct: 152 INHQPYLERGD--GPI-CLVLAPTRELAQQVQQVADDYGKC-SRLKSTCIYGGAPKGPQI 207
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R LE +I +ATPGRL+D +E +G L LVLDEAD +LD+GF + IVD
Sbjct: 208 RDLERG-VEICIATPGRLIDFLE--AG-KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 263
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT--VGLGSVETPVKIKQSCLVAPHE 618
+ RQ+L++SAT PKEVR++++ L+ ++ I+ + L + ++I C+ + +
Sbjct: 264 QIRPDRQTLMWSATWPKEVRQLAEDFLQ-DYVQINVGNLELSANHNILQIVDVCMESEKD 322
Query: 619 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 678
H +++ L E I+ + K I+F T L +R ++ K Q RD
Sbjct: 323 -H-KLIQ--LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDW 378
Query: 679 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ EFR+ K IL+ +DV++RG+D DV V+ P E Y+H
Sbjct: 379 VLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVH 423
>UNIPROTKB|Q9NR30 [details] [associations]
symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
Length = 783
Score = 396 (144.5 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 111/372 (29%), Positives = 176/372 (47%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L G + +Q T GKD + +A+TGTGK+ +F +P IE
Sbjct: 188 FSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEK 247
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ P VL+L PTRELA+Q++ + + K + V GGT +
Sbjct: 248 LHGELQDRKRGRAPQ--VLVLAPTRELANQVSKDFSDITKK---LSVACFYGGTPYGGQF 302
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ + ILV TPGR+ DHI+N G + L LK +VLDE D +LD+GF VE I+
Sbjct: 303 ERMRNG-IDILVGTPGRIKDHIQN--G-KLDLTKLKHVVLDEVDQMLDMGFADQVEEILS 358
Query: 561 CLPRRR-----QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVA 615
++ Q+LLFSAT P V +++ +K + +D +G + +T + ++ +
Sbjct: 359 VAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKC 418
Query: 616 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 675
++ +++ + + I+FC T L +K + + ++ PQ
Sbjct: 419 HWTQRAAVIGDVIR--VYSGHQGRTIIFCETKKEAQELSQN-SAIKQDAQSLHGDIPQKQ 475
Query: 676 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 735
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 476 REITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTG 535
Query: 736 XXVLLLAPWEEY 747
+ EEY
Sbjct: 536 VCICFYQHKEEY 547
>UNIPROTKB|F1LX16 [details] [associations]
symbol:F1LX16 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
Length = 659
Score = 392 (143.0 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 112/373 (30%), Positives = 178/373 (47%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS T+K L A G + +Q T GKD + +A+TGTGK+ +F +P IE
Sbjct: 68 FSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEK 127
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ P VL+L PTRELA+Q++ + + K + V GGT +
Sbjct: 128 LQGGLQERKRGRAPQ--VLVLAPTRELANQVSKDFSDITKK---LSVACFYGGTPYGGQI 182
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ S ILV TPGR+ DH++N G + L LK +VLDE D +LD+GF VE I+
Sbjct: 183 ERMRSG-IDILVGTPGRIKDHLQN--G-KLDLTKLKHVVLDEVDQMLDMGFADQVEEIL- 237
Query: 561 CLPRRR------QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLV 614
C+ ++ Q+LLFSAT P V +++ +K + +D +G + + + ++ +
Sbjct: 238 CVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYKQVDLIGKKTQKAAITVEHLAIK 297
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
++ +++ + + I+FC T L +K + + ++ PQ
Sbjct: 298 CHWTERAAVIGDVIR--VYSGHQGRTIIFCETKKDAQELSQNTC-IKQDAQSLHGDIPQK 354
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R+ + FR +LV ++V+ARG+D P+V VVQ P D E YIH
Sbjct: 355 QREITLKGFRNDNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRT 414
Query: 735 XXXVLLLAPWEEY 747
+ EEY
Sbjct: 415 GVCICFYQHKEEY 427
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 407 (148.3 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 117/368 (31%), Positives = 172/368 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
+ +CG+S TI + + GY + T +Q + A G+D + AKTG+GK+IAFLLP
Sbjct: 420 WSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRH 479
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ T + PI +I+ PTRELA QI E LK + I GG K DQ
Sbjct: 480 IKDQRPLKTGE--GPI-AIIMTPTRELAVQIFRECKPFLKLLN-IRACCAYGGAPIK-DQ 534
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+I+V TPGR++D + +G L LVLDEAD + DLGF V I++
Sbjct: 535 IADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIIN 594
Query: 561 CLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 620
+ RQ++LFSAT P+ + +++ VLK+ TVG SV +++Q V P E
Sbjct: 595 NIRPDRQTVLFSATFPRAMEALARKVLKKPVEI--TVGGRSVVAS-EVEQIVEVRPEESK 651
Query: 621 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 680
F L LL E D + +VF L L + ++ K Q RD
Sbjct: 652 FSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTI 711
Query: 681 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 740
+++A +L+ + V ARG+D + VV P E Y+H V
Sbjct: 712 SDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTF 771
Query: 741 LAPWEEYF 748
+ P +E +
Sbjct: 772 ITPEQEKY 779
Score = 38 (18.4 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 106 RFMKEGAEDLWNEDD-GPVKSEQ 127
R E ++LW+++D G + +EQ
Sbjct: 271 RMNLEDYQELWDQEDRGMLGNEQ 293
>TAIR|locus:2167903 [details] [associations]
symbol:PRH75 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
GO:GO:0003723 GO:GO:0016070 GO:GO:0017151 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB019235 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 EMBL:X99938 EMBL:AY039576 EMBL:AY056137
EMBL:BT008581 IPI:IPI00520493 RefSeq:NP_201025.1 UniGene:At.22598
ProteinModelPortal:Q39189 SMR:Q39189 IntAct:Q39189 STRING:Q39189
PaxDb:Q39189 PRIDE:Q39189 EnsemblPlants:AT5G62190.1 GeneID:836340
KEGG:ath:AT5G62190 GeneFarm:918 TAIR:At5g62190 InParanoid:Q39189
OMA:QCEPPRE PhylomeDB:Q39189 ProtClustDB:CLSN2687322
Genevestigator:Q39189 GermOnline:AT5G62190 Uniprot:Q39189
Length = 671
Score = 392 (143.0 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 115/342 (33%), Positives = 180/342 (52%)
Query: 387 SPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATS 446
+PL K L A G + +Q +T L+G D V +A+TG GK++AF+LP +E+++ +
Sbjct: 105 APLREK-LKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPA 163
Query: 447 SSTTQLV---PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
S ++ P VL+L PTRELA Q+AA+ A G+ L GG + V + +L
Sbjct: 164 KSKRKMGYGRSPS-VLVLLPTRELAKQVAADFDAY-GGSLGLSSCCLYGGDSYPVQEGKL 221
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ I+V TPGR+ DHIE ++ + L+ VLDEAD +L +GF +DVE I+ +
Sbjct: 222 KRG-VDIVVGTPGRIKDHIERQN---LDFSYLQFRVLDEADEMLRMGFVEDVELILGKVE 277
Query: 564 --RRRQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 621
+ Q+LLFSAT+P V+ IS LKR+ ID VG ++ ++ +
Sbjct: 278 DSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMA 337
Query: 622 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 681
+++ ++ + G + I+F T + S L LL R ++ PQ R+
Sbjct: 338 RLIPDIISCYSSGG---QTIIFAETKVQVSELSGLLD----GSRALHGEIPQSQREVTLA 390
Query: 682 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
FR K LV ++V+ARG+D DV ++Q P + E YIH
Sbjct: 391 GFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIH 432
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 392 (143.0 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 114/353 (32%), Positives = 188/353 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + ++ +GY++ T VQ+ L G+D + A+TG+GK+ AFLLP ++
Sbjct: 183 FEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQ 242
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV--GGTRF 496
++ +S +++ P V++ PTREL +QI EA K G V +V GG
Sbjct: 243 LMADGVAASRFSEIQEPEAVIV-APTRELINQIYQEA---RKFSFGTCVRPVVVYGGVNT 298
Query: 497 KVDQRRLESDPCQILVATPGRLLDHI-ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
R +E C +L TPGRLLD I K GLS ++ LVLDEAD +LD+GF D+
Sbjct: 299 GYQMREIEKG-CNVLCGTPGRLLDMIGRGKVGLSK----VRHLVLDEADRMLDMGFEPDM 353
Query: 556 ENIVDC--LPRR--RQSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQS 611
+V +P + RQ+L+FSAT P++++R++ LK ++ ++ +G T V+ Q+
Sbjct: 354 RRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACTDVE--QT 411
Query: 612 CL-VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 670
L V Q+L LL+ +G+ + +VF T + L + K+ ++
Sbjct: 412 FLQVTKFNKREQLLD-LLRT--IGSE--RTMVFVETKRQADFIAAFLCQEKVPTTSIHGD 466
Query: 671 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+ Q R++ +FR+ K +LV + V++RG+D PDV VV +P + Y+H
Sbjct: 467 REQREREKALADFRSGKCPVLVATSVASRGLDIPDVQHVVNFDLPNTIDDYVH 519
Score = 39 (18.8 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 235 GSSTRDKAGFDTGNKAKPFARNLGNNRENGDS 266
G R + G G FA G EN D+
Sbjct: 98 GGGERGRGGGYRGRDEDVFAAGDGRGAENSDA 129
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 376 (137.4 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 110/339 (32%), Positives = 176/339 (51%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
TIK + + + T VQ L G D + +KTG+GK+++F+LPAIE +L S
Sbjct: 150 TIKNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILAQPRQS- 208
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
P VL++ PTRELA+QI EA L+ + I + T+ GG + Q +L P +
Sbjct: 209 --YYPGPSVLVVAPTRELANQINQEAEQYLRLVN-IEIATIYGGAPRRSQQLQLSRRP-K 264
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+V TPGR++D +E SG + L + LV+DEAD L+++GF + ++ I + + RQ L
Sbjct: 265 IVVGTPGRIIDFME--SG-DLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVL 321
Query: 570 LFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPHELH-FQILHHL 627
+SAT PK+V ++ K T I +G + I Q + P + L
Sbjct: 322 YWSATWPKKVSSFAE---KHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVDALMDT 378
Query: 628 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDRISEEFRA 685
L E + ++F T L ++ NVR ++ Q R+RI ++F+
Sbjct: 379 LGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQDFK- 437
Query: 686 SKRL-ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
+KRL I+V +DV++RG+D ++ V+ +P D E Y+H
Sbjct: 438 NKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVH 476
Score = 53 (23.7 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 223 SGTDKRNFCRNDGSSTRDKAGFDT-GNKAK 251
+ + +F NDG +++ GFD GNK +
Sbjct: 58 NNNNNNSFMNNDGYNSKSNNGFDNFGNKKR 87
Score = 38 (18.4 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 256 NLGNNRENGDSKNMSEFMKKKCFVGK 281
N NN N ++ N + FM + K
Sbjct: 49 NYQNNYNNNNNNNNNSFMNNDGYNSK 74
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 381 (139.2 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 114/347 (32%), Positives = 171/347 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPKEVRRISQLVLKREHTYIDT-VGLGSVETPVKIKQSCLVAPH 617
VD + RQ+++FSAT P+ + +++ +L + I+ VG SV ++Q +V
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKP---IEVQVGGRSVVCS-DVEQQVIVIEE 602
Query: 618 ELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYR 676
E F L LL + VI+F LL L+R ++ Q R
Sbjct: 603 EKKFLKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDR 658
Query: 677 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 723
D I +F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 659 DSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 64 (27.6 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 30/139 (21%), Positives = 57/139 (41%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + G+K K N ++E + + S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGSKTKK-TENRSRSKEKAEGGDSSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>RGD|1307306 [details] [associations]
symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
Uniprot:Q3B8Q1
Length = 782
Score = 392 (143.0 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 112/373 (30%), Positives = 178/373 (47%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS T+K L A G + +Q T GKD + +A+TGTGK+ +F +P IE
Sbjct: 184 FSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEK 243
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ P VL+L PTRELA+Q++ + + K + V GGT +
Sbjct: 244 LQGGLQERKRGRAPQ--VLVLAPTRELANQVSKDFSDITKK---LSVACFYGGTPYGGQI 298
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ S ILV TPGR+ DH++N G + L LK +VLDE D +LD+GF VE I+
Sbjct: 299 ERMRSG-IDILVGTPGRIKDHLQN--G-KLDLTKLKHVVLDEVDQMLDMGFADQVEEIL- 353
Query: 561 CLPRRR------QSLLFSATMPKEVRRISQLVLKREHTYIDTVGLGSVETPVKIKQSCLV 614
C+ ++ Q+LLFSAT P V +++ +K + +D +G + + + ++ +
Sbjct: 354 CVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIK 413
Query: 615 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 674
++ +++ + + I+FC T L +K + + ++ PQ
Sbjct: 414 CHWTERAAVIGDVIR--VYSGHQGRTIIFCETKKDAQELSQNTC-IKQDAQSLHGDIPQK 470
Query: 675 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 734
R+ + FR +LV ++V+ARG+D P+V VVQ P D E YIH
Sbjct: 471 QREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRT 530
Query: 735 XXXVLLLAPWEEY 747
+ EEY
Sbjct: 531 GVCICFYQHKEEY 543
WARNING: HSPs involving 610 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 848 747 0.00089 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 860
No. of states in DFA: 622 (66 KB)
Total size of DFA: 367 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.15u 0.10s 58.25t Elapsed: 00:00:02
Total cpu time: 58.21u 0.10s 58.31t Elapsed: 00:00:03
Start: Fri May 10 19:38:43 2013 End: Fri May 10 19:38:46 2013
WARNINGS ISSUED: 2