Query 003103
Match_columns 847
No_of_seqs 421 out of 3619
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 17:04:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003103.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003103hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 8E-143 2E-147 1189.0 57.6 818 18-846 3-966 (972)
2 KOG0205 Plasma membrane H+-tra 100.0 1E-139 3E-144 1125.9 50.0 802 9-810 8-809 (942)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 3E-134 6E-139 1207.1 87.7 752 37-808 1-754 (755)
4 PRK10517 magnesium-transportin 100.0 6E-134 1E-138 1217.4 89.4 805 17-846 47-895 (902)
5 PRK15122 magnesium-transportin 100.0 1E-132 3E-137 1207.7 89.2 811 17-846 25-895 (903)
6 TIGR01523 ATPase-IID_K-Na pota 100.0 1E-132 2E-137 1220.9 88.4 817 15-846 3-1045(1053)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 4E-132 8E-137 1203.1 91.3 804 17-846 13-860 (867)
8 COG0474 MgtA Cation transport 100.0 7E-132 2E-136 1203.0 78.9 807 16-835 20-899 (917)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-127 4E-132 1178.9 89.2 836 8-846 5-983 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-126 3E-131 1162.2 88.7 798 17-846 2-880 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 1E-125 3E-130 1159.9 89.4 816 23-846 43-939 (941)
12 KOG0204 Calcium transporting A 100.0 6E-129 1E-133 1075.8 51.6 803 24-837 103-995 (1034)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 6E-117 1E-121 1079.6 83.2 778 66-846 1-916 (917)
14 TIGR01657 P-ATPase-V P-type AT 100.0 2E-116 5E-121 1087.9 77.9 781 35-831 137-1051(1054)
15 KOG0203 Na+/K+ ATPase, alpha s 100.0 5E-119 1E-123 995.9 35.1 840 3-845 22-1004(1019)
16 TIGR01652 ATPase-Plipid phosph 100.0 1.5E-97 3E-102 923.3 66.4 712 50-774 1-971 (1057)
17 PRK14010 potassium-transportin 100.0 3.1E-97 7E-102 858.2 58.2 546 68-670 28-588 (673)
18 KOG0208 Cation transport ATPas 100.0 4.2E-96 9E-101 825.1 53.1 744 26-787 149-1054(1140)
19 PRK01122 potassium-transportin 100.0 4.4E-94 9.5E-99 832.7 61.9 536 68-659 29-581 (679)
20 PLN03190 aminophospholipid tra 100.0 7.8E-91 1.7E-95 853.2 69.2 680 48-737 85-1041(1178)
21 TIGR01497 kdpB K+-transporting 100.0 2.2E-89 4.7E-94 791.5 60.2 538 68-660 28-583 (675)
22 COG2217 ZntA Cation transport 100.0 4.2E-87 9.1E-92 773.5 57.1 508 97-668 173-682 (713)
23 PRK11033 zntA zinc/cadmium/mer 100.0 2.4E-81 5.1E-86 748.3 58.6 501 97-665 205-708 (741)
24 KOG0207 Cation transport ATPas 100.0 7.1E-83 1.5E-87 719.8 39.9 536 100-690 343-890 (951)
25 TIGR01494 ATPase_P-type ATPase 100.0 1.1E-78 2.4E-83 703.2 55.2 475 105-667 3-483 (499)
26 KOG0209 P-type ATPase [Inorgan 100.0 3.3E-78 7.1E-83 665.5 48.5 795 24-845 150-1147(1160)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 7.3E-77 1.6E-81 694.1 59.7 519 77-666 4-528 (556)
28 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.1E-77 6.6E-82 692.8 55.2 500 77-665 4-506 (536)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 1.9E-76 4E-81 688.3 58.5 506 97-679 53-560 (562)
30 PRK10671 copA copper exporting 100.0 2.3E-75 5E-80 710.9 60.6 521 98-682 285-810 (834)
31 KOG0206 P-type ATPase [General 100.0 4.6E-77 1E-81 705.7 28.2 683 46-738 28-965 (1151)
32 KOG0210 P-type ATPase [Inorgan 100.0 7.4E-75 1.6E-79 628.0 42.5 700 45-780 74-980 (1051)
33 COG2216 KdpB High-affinity K+ 100.0 1.9E-65 4.2E-70 541.7 34.5 520 69-644 29-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.4E-35 3E-40 309.5 26.0 220 104-324 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 2.9E-26 6.4E-31 236.4 12.0 211 328-605 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 3.1E-15 6.6E-20 132.6 10.3 124 483-637 20-146 (152)
37 PF00689 Cation_ATPase_C: Cati 99.4 2.8E-12 6.1E-17 128.7 14.6 166 673-845 1-182 (182)
38 PF00690 Cation_ATPase_N: Cati 99.4 5.8E-13 1.3E-17 110.4 6.9 67 19-85 1-69 (69)
39 KOG4383 Uncharacterized conser 99.2 3.5E-08 7.5E-13 109.4 29.9 209 482-690 815-1130(1354)
40 smart00831 Cation_ATPase_N Cat 99.1 3.3E-10 7.1E-15 92.5 7.0 60 30-89 2-63 (64)
41 TIGR02137 HSK-PSP phosphoserin 99.0 2.8E-09 6E-14 108.3 10.8 131 493-640 68-198 (203)
42 PRK11133 serB phosphoserine ph 98.9 6.9E-09 1.5E-13 112.6 11.2 131 493-638 181-316 (322)
43 TIGR00338 serB phosphoserine p 98.9 9.9E-09 2.2E-13 106.2 10.3 129 493-636 85-218 (219)
44 PRK01158 phosphoglycolate phos 98.8 4.3E-08 9.4E-13 102.2 13.0 153 486-638 12-226 (230)
45 TIGR01487 SPP-like sucrose-pho 98.8 2.3E-08 5E-13 103.1 10.0 144 493-636 18-214 (215)
46 PF13246 Hydrolase_like2: Puta 98.8 1.7E-08 3.6E-13 88.4 7.0 65 375-440 20-90 (91)
47 COG0561 Cof Predicted hydrolas 98.7 1.1E-07 2.3E-12 101.5 13.6 154 486-639 12-259 (264)
48 TIGR02726 phenyl_P_delta pheny 98.7 3.8E-08 8.3E-13 96.5 9.3 100 500-629 41-142 (169)
49 TIGR01670 YrbI-phosphatas 3-de 98.7 9E-08 1.9E-12 93.0 10.5 97 501-629 36-136 (154)
50 PRK10513 sugar phosphate phosp 98.7 6.9E-08 1.5E-12 103.3 10.4 66 573-638 196-265 (270)
51 PRK15126 thiamin pyrimidine py 98.7 1E-07 2.2E-12 102.2 11.6 66 573-638 188-259 (272)
52 TIGR01482 SPP-subfamily Sucros 98.6 2.3E-07 4.9E-12 96.4 12.7 146 493-638 15-222 (225)
53 PRK10976 putative hydrolase; P 98.6 1.7E-07 3.7E-12 100.1 10.9 66 573-638 190-261 (266)
54 COG0560 SerB Phosphoserine pho 98.6 1.7E-07 3.7E-12 95.7 10.1 110 492-615 76-190 (212)
55 PRK13582 thrH phosphoserine ph 98.6 4E-07 8.7E-12 93.1 11.1 127 493-637 68-195 (205)
56 PF08282 Hydrolase_3: haloacid 98.5 2.6E-07 5.5E-12 97.3 8.8 146 492-637 14-254 (254)
57 PRK09484 3-deoxy-D-manno-octul 98.5 3.1E-07 6.7E-12 92.0 8.7 110 500-641 55-172 (183)
58 PRK10530 pyridoxal phosphate ( 98.5 7.7E-07 1.7E-11 95.3 11.0 66 573-638 199-268 (272)
59 PLN02887 hydrolase family prot 98.5 6.5E-07 1.4E-11 104.1 10.6 52 587-638 525-576 (580)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 7.2E-07 1.6E-11 90.8 9.6 117 493-622 80-200 (201)
61 PRK08238 hypothetical protein; 98.4 6.4E-05 1.4E-09 86.1 25.4 101 493-618 72-172 (479)
62 TIGR00099 Cof-subfamily Cof su 98.4 1.6E-06 3.5E-11 92.0 10.8 64 573-636 188-255 (256)
63 TIGR01486 HAD-SF-IIB-MPGP mann 98.4 3.1E-06 6.7E-11 89.8 13.0 66 573-638 176-253 (256)
64 TIGR03333 salvage_mtnX 2-hydro 98.3 3E-06 6.4E-11 87.3 11.4 135 492-638 69-209 (214)
65 KOG1615 Phosphoserine phosphat 98.3 1.2E-06 2.6E-11 84.2 7.0 102 493-611 88-199 (227)
66 PF12710 HAD: haloacid dehalog 98.3 8.4E-07 1.8E-11 89.5 6.4 92 496-602 92-192 (192)
67 COG1778 Low specificity phosph 98.3 2.4E-06 5.1E-11 79.6 7.7 115 500-646 42-164 (170)
68 PRK03669 mannosyl-3-phosphogly 98.2 8.2E-06 1.8E-10 87.3 12.4 66 573-638 187-265 (271)
69 PLN02954 phosphoserine phospha 98.2 1.3E-05 2.8E-10 83.2 12.2 125 493-635 84-221 (224)
70 PRK00192 mannosyl-3-phosphogly 98.2 1.8E-05 3.8E-10 84.8 12.7 66 573-638 190-267 (273)
71 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1.3E-05 2.9E-10 80.4 9.5 113 492-609 71-186 (188)
72 TIGR01488 HAD-SF-IB Haloacid D 98.0 9.4E-06 2E-10 80.7 6.9 100 494-604 74-177 (177)
73 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2.9E-05 6.2E-10 80.3 10.1 135 493-638 74-213 (219)
74 PRK13222 phosphoglycolate phos 97.9 3E-05 6.6E-10 80.4 8.9 125 492-639 92-223 (226)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 2.9E-05 6.2E-10 79.1 8.5 108 491-611 85-197 (202)
76 COG0546 Gph Predicted phosphat 97.9 4.2E-05 9.2E-10 79.1 8.4 127 491-638 87-218 (220)
77 cd01427 HAD_like Haloacid deha 97.7 6E-05 1.3E-09 70.7 6.8 118 489-609 20-138 (139)
78 TIGR01454 AHBA_synth_RP 3-amin 97.7 0.0001 2.3E-09 75.2 8.1 124 493-637 75-203 (205)
79 TIGR02461 osmo_MPG_phos mannos 97.6 0.00028 6.2E-09 73.1 9.4 43 491-533 13-55 (225)
80 TIGR01485 SPP_plant-cyano sucr 97.6 0.00031 6.6E-09 74.2 9.4 148 491-638 19-244 (249)
81 PRK13223 phosphoglycolate phos 97.4 0.00059 1.3E-08 72.9 9.6 123 492-637 100-229 (272)
82 PRK13288 pyrophosphatase PpaX; 97.4 0.00077 1.7E-08 69.3 9.9 124 493-637 82-210 (214)
83 PRK10187 trehalose-6-phosphate 97.3 0.0018 3.9E-08 69.0 11.8 139 493-637 36-240 (266)
84 TIGR02463 MPGP_rel mannosyl-3- 97.3 0.0018 4E-08 66.9 11.1 39 495-533 18-56 (221)
85 TIGR02471 sucr_syn_bact_C sucr 97.3 0.00034 7.4E-09 73.2 5.6 67 572-638 158-232 (236)
86 TIGR01449 PGP_bact 2-phosphogl 97.2 0.00097 2.1E-08 68.4 8.5 120 493-635 85-211 (213)
87 PRK10826 2-deoxyglucose-6-phos 97.0 0.0019 4.2E-08 66.8 8.3 119 492-634 91-216 (222)
88 PRK13225 phosphoglycolate phos 97.0 0.0045 9.7E-08 66.1 10.9 118 493-637 142-267 (273)
89 TIGR01544 HAD-SF-IE haloacid d 97.0 0.0086 1.9E-07 63.3 12.6 133 492-638 120-274 (277)
90 PRK13226 phosphoglycolate phos 96.9 0.002 4.4E-08 67.0 7.4 124 493-637 95-224 (229)
91 TIGR03351 PhnX-like phosphonat 96.9 0.0041 8.8E-08 64.2 9.6 122 492-636 86-218 (220)
92 TIGR01422 phosphonatase phosph 96.9 0.0049 1.1E-07 65.2 10.0 94 493-607 99-196 (253)
93 PRK14502 bifunctional mannosyl 96.8 0.0066 1.4E-07 71.1 10.7 48 486-533 425-473 (694)
94 PRK13478 phosphonoacetaldehyde 96.8 0.008 1.7E-07 64.1 10.5 122 493-637 101-254 (267)
95 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0019 4.1E-08 65.5 5.1 94 491-604 104-197 (197)
96 COG4030 Uncharacterized protei 96.7 0.013 2.8E-07 58.2 10.4 144 493-639 83-263 (315)
97 PRK12702 mannosyl-3-phosphogly 96.7 0.011 2.5E-07 62.3 10.7 43 492-534 17-59 (302)
98 PRK11590 hypothetical protein; 96.6 0.0081 1.8E-07 61.6 9.1 107 493-612 95-203 (211)
99 PLN03243 haloacid dehalogenase 96.6 0.0091 2E-07 63.3 9.5 121 493-634 109-231 (260)
100 TIGR01545 YfhB_g-proteo haloac 96.6 0.007 1.5E-07 62.0 8.2 107 493-612 94-202 (210)
101 PRK06698 bifunctional 5'-methy 96.5 0.0074 1.6E-07 69.7 8.9 123 493-639 330-455 (459)
102 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.012 2.7E-07 59.8 9.0 39 493-531 17-55 (204)
103 PLN02382 probable sucrose-phos 96.4 0.004 8.7E-08 70.4 5.8 71 568-638 168-257 (413)
104 TIGR01672 AphA HAD superfamily 96.4 0.0059 1.3E-07 63.4 6.1 89 493-607 114-206 (237)
105 PLN02770 haloacid dehalogenase 96.3 0.018 3.8E-07 60.7 9.7 115 493-626 108-226 (248)
106 PRK06769 hypothetical protein; 96.3 0.014 3E-07 57.8 7.8 98 494-609 29-134 (173)
107 PRK14501 putative bifunctional 96.2 0.051 1.1E-06 66.5 14.2 170 449-637 481-720 (726)
108 PRK11587 putative phosphatase; 96.2 0.017 3.7E-07 59.5 8.7 111 493-625 83-197 (218)
109 PRK11009 aphA acid phosphatase 96.2 0.01 2.2E-07 61.6 6.8 87 493-607 114-206 (237)
110 TIGR02253 CTE7 HAD superfamily 96.1 0.018 3.8E-07 59.4 7.8 97 493-611 94-195 (221)
111 COG4359 Uncharacterized conser 96.0 0.011 2.4E-07 57.0 5.4 112 493-610 73-184 (220)
112 PRK08942 D,D-heptose 1,7-bisph 96.0 0.032 7E-07 55.7 9.2 128 493-638 29-177 (181)
113 PLN02779 haloacid dehalogenase 95.8 0.026 5.6E-07 60.8 8.0 119 493-633 144-268 (286)
114 PHA02530 pseT polynucleotide k 95.8 0.023 4.9E-07 61.7 7.4 108 490-608 184-292 (300)
115 PLN02575 haloacid dehalogenase 95.7 0.032 7E-07 61.8 8.2 118 493-633 216-337 (381)
116 PRK14988 GMP/IMP nucleotidase; 95.6 0.027 5.9E-07 58.3 6.9 93 493-607 93-188 (224)
117 TIGR02254 YjjG/YfnB HAD superf 95.6 0.035 7.5E-07 57.2 7.6 120 493-636 97-223 (224)
118 TIGR01428 HAD_type_II 2-haloal 95.6 0.027 5.8E-07 57.0 6.6 94 493-607 92-187 (198)
119 TIGR01662 HAD-SF-IIIA HAD-supe 95.4 0.054 1.2E-06 50.9 7.8 92 492-606 24-125 (132)
120 COG2179 Predicted hydrolase of 95.3 0.15 3.2E-06 48.9 10.1 109 452-606 20-132 (175)
121 TIGR01685 MDP-1 magnesium-depe 95.2 0.054 1.2E-06 53.5 7.0 110 485-610 37-155 (174)
122 TIGR01990 bPGM beta-phosphoglu 95.1 0.028 6.1E-07 56.0 5.0 91 493-607 87-180 (185)
123 PRK09449 dUMP phosphatase; Pro 95.0 0.048 1E-06 56.3 6.6 120 493-637 95-222 (224)
124 PF13419 HAD_2: Haloacid dehal 95.0 0.019 4.1E-07 56.2 3.2 95 492-607 76-172 (176)
125 TIGR01509 HAD-SF-IA-v3 haloaci 94.8 0.078 1.7E-06 52.6 7.2 94 493-606 85-178 (183)
126 TIGR02009 PGMB-YQAB-SF beta-ph 94.8 0.028 6E-07 56.1 3.8 92 492-607 87-181 (185)
127 smart00775 LNS2 LNS2 domain. T 94.7 0.2 4.3E-06 48.7 9.5 103 491-607 25-141 (157)
128 PF05116 S6PP: Sucrose-6F-phos 94.7 0.082 1.8E-06 55.6 7.3 45 572-616 164-212 (247)
129 PLN02940 riboflavin kinase 94.6 0.047 1E-06 61.3 5.5 111 493-625 93-210 (382)
130 PTZ00174 phosphomannomutase; P 94.5 0.026 5.6E-07 59.4 3.0 58 568-625 181-245 (247)
131 TIGR01668 YqeG_hyp_ppase HAD s 94.4 0.15 3.2E-06 50.3 8.1 85 492-607 42-131 (170)
132 PLN02580 trehalose-phosphatase 94.2 0.54 1.2E-05 52.2 12.6 68 567-638 292-374 (384)
133 TIGR00213 GmhB_yaeD D,D-heptos 94.0 0.21 4.6E-06 49.5 8.2 26 494-519 27-52 (176)
134 TIGR01549 HAD-SF-IA-v1 haloaci 93.8 0.065 1.4E-06 51.7 4.1 88 494-605 65-154 (154)
135 TIGR01533 lipo_e_P4 5'-nucleot 93.8 0.3 6.5E-06 51.6 9.1 86 491-601 116-204 (266)
136 TIGR01656 Histidinol-ppas hist 93.7 0.13 2.8E-06 49.4 5.8 96 493-607 27-140 (147)
137 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.3 0.83 1.8E-05 47.9 11.7 48 486-533 17-66 (242)
138 PF06888 Put_Phosphatase: Puta 93.3 0.21 4.5E-06 51.7 6.9 106 493-602 71-187 (234)
139 TIGR00685 T6PP trehalose-phosp 93.0 0.17 3.6E-06 53.2 5.9 67 567-637 161-239 (244)
140 TIGR02252 DREG-2 REG-2-like, H 92.8 0.22 4.8E-06 50.5 6.3 91 493-606 105-199 (203)
141 PRK05446 imidazole glycerol-ph 92.7 0.27 5.9E-06 54.2 7.2 97 492-608 29-144 (354)
142 TIGR01261 hisB_Nterm histidino 92.6 0.17 3.7E-06 49.4 4.9 97 493-609 29-144 (161)
143 smart00577 CPDc catalytic doma 92.5 0.11 2.4E-06 49.9 3.4 95 491-610 43-140 (148)
144 TIGR01691 enolase-ppase 2,3-di 92.2 0.23 5.1E-06 51.1 5.5 99 491-610 93-194 (220)
145 TIGR01675 plant-AP plant acid 91.8 0.81 1.8E-05 47.1 8.9 88 492-599 119-210 (229)
146 COG3769 Predicted hydrolase (H 91.7 1.3 2.8E-05 44.4 9.6 37 497-533 27-63 (274)
147 PLN02811 hydrolase 90.8 0.44 9.5E-06 49.1 6.0 96 493-608 78-180 (220)
148 TIGR01681 HAD-SF-IIIC HAD-supe 90.8 0.85 1.8E-05 42.6 7.3 39 493-531 29-68 (128)
149 PF09419 PGP_phosphatase: Mito 90.6 0.88 1.9E-05 44.5 7.4 102 455-600 36-152 (168)
150 TIGR01664 DNA-3'-Pase DNA 3'-p 89.9 0.81 1.8E-05 44.9 6.6 39 495-533 44-94 (166)
151 PLN02205 alpha,alpha-trehalose 89.6 1.6 3.4E-05 54.1 10.2 67 450-529 586-653 (854)
152 TIGR02247 HAD-1A3-hyp Epoxide 89.2 0.19 4E-06 51.4 1.6 89 492-607 93-191 (211)
153 PRK10563 6-phosphogluconate ph 89.0 0.24 5.3E-06 50.9 2.3 95 493-610 88-184 (221)
154 KOG3120 Predicted haloacid deh 88.9 2.4 5.2E-05 42.6 8.9 106 493-611 84-209 (256)
155 PLN02919 haloacid dehalogenase 88.6 1.6 3.4E-05 55.8 9.4 115 493-627 161-281 (1057)
156 TIGR01686 FkbH FkbH-like domai 88.1 1.3 2.8E-05 48.6 7.4 91 493-611 31-129 (320)
157 PLN03017 trehalose-phosphatase 88.0 11 0.00023 41.9 14.1 61 573-637 283-355 (366)
158 PHA02597 30.2 hypothetical pro 86.1 1.4 2.9E-05 44.5 5.8 93 493-608 74-170 (197)
159 TIGR01993 Pyr-5-nucltdase pyri 84.5 1 2.2E-05 44.8 3.9 92 493-607 84-180 (184)
160 PRK09456 ?-D-glucose-1-phospha 83.7 2.1 4.6E-05 43.1 5.9 95 493-608 84-181 (199)
161 PLN02645 phosphoglycolate phos 83.3 2.2 4.7E-05 46.6 6.1 48 486-533 37-87 (311)
162 PF13344 Hydrolase_6: Haloacid 81.4 1.1 2.3E-05 40.0 2.3 48 486-533 7-57 (101)
163 PRK10725 fructose-1-P/6-phosph 78.2 3.6 7.8E-05 40.9 5.3 88 498-607 92-181 (188)
164 PF03767 Acid_phosphat_B: HAD 76.7 6.3 0.00014 40.9 6.7 82 492-600 114-207 (229)
165 COG0241 HisB Histidinol phosph 75.2 5.8 0.00013 39.3 5.6 96 494-607 32-144 (181)
166 PRK10748 flavin mononucleotide 72.5 10 0.00022 39.5 7.1 90 493-610 113-206 (238)
167 TIGR01680 Veg_Stor_Prot vegeta 70.9 23 0.00051 37.4 9.1 42 491-533 143-188 (275)
168 TIGR01684 viral_ppase viral ph 70.4 7.5 0.00016 41.5 5.3 41 494-534 146-187 (301)
169 PF08235 LNS2: LNS2 (Lipin/Ned 68.6 26 0.00055 33.9 8.1 103 492-607 26-141 (157)
170 COG0474 MgtA Cation transport 68.6 1.1E+02 0.0025 38.6 16.2 271 18-306 41-330 (917)
171 PHA03398 viral phosphatase sup 68.4 8.3 0.00018 41.2 5.2 41 494-534 148-189 (303)
172 TIGR01458 HAD-SF-IIA-hyp3 HAD- 68.3 9.7 0.00021 40.2 5.8 118 496-636 123-253 (257)
173 PRK10444 UMP phosphatase; Prov 68.2 5.3 0.00011 42.0 3.7 45 486-530 10-54 (248)
174 PLN02151 trehalose-phosphatase 67.1 83 0.0018 34.8 12.7 61 573-637 269-341 (354)
175 TIGR01458 HAD-SF-IIA-hyp3 HAD- 66.6 6.9 0.00015 41.3 4.3 48 486-533 10-64 (257)
176 TIGR02251 HIF-SF_euk Dullard-l 65.8 4.1 8.8E-05 39.8 2.2 42 491-533 40-81 (162)
177 TIGR01457 HAD-SF-IIA-hyp2 HAD- 65.1 11 0.00024 39.5 5.5 48 486-533 10-60 (249)
178 KOG3040 Predicted sugar phosph 64.5 13 0.00028 37.3 5.2 51 483-533 13-66 (262)
179 PLN02177 glycerol-3-phosphate 64.3 22 0.00048 41.3 8.1 98 494-612 111-215 (497)
180 TIGR01517 ATPase-IIB_Ca plasma 62.5 73 0.0016 40.5 13.0 201 99-306 133-358 (941)
181 COG0637 Predicted phosphatase/ 60.8 19 0.00041 37.0 6.2 99 492-609 85-183 (221)
182 TIGR01647 ATPase-IIIA_H plasma 60.4 1.4E+02 0.0031 36.9 14.6 36 155-190 99-135 (755)
183 TIGR01493 HAD-SF-IA-v2 Haloaci 59.9 11 0.00025 36.7 4.2 84 493-604 90-175 (175)
184 COG3700 AphA Acid phosphatase 59.8 9.9 0.00021 36.9 3.4 90 494-610 115-210 (237)
185 PLN02423 phosphomannomutase 58.2 13 0.00028 38.9 4.5 40 572-612 188-232 (245)
186 TIGR01663 PNK-3'Pase polynucle 56.3 34 0.00075 40.0 7.9 40 494-533 198-249 (526)
187 PTZ00445 p36-lilke protein; Pr 55.1 26 0.00055 35.6 5.6 63 445-520 28-102 (219)
188 COG1011 Predicted hydrolase (H 53.9 36 0.00079 34.7 7.0 119 493-637 99-226 (229)
189 TIGR01689 EcbF-BcbF capsule bi 52.7 16 0.00034 34.0 3.5 31 492-522 23-53 (126)
190 PF06506 PrpR_N: Propionate ca 52.1 62 0.0013 31.9 8.0 106 497-649 65-172 (176)
191 PF13380 CoA_binding_2: CoA bi 49.8 16 0.00034 33.4 3.1 80 450-533 18-104 (116)
192 PF12368 DUF3650: Protein of u 49.7 13 0.00027 24.6 1.6 15 35-49 13-27 (28)
193 PTZ00174 phosphomannomutase; P 49.7 25 0.00053 36.8 5.0 41 486-526 14-55 (247)
194 TIGR01522 ATPase-IIA2_Ca golgi 48.2 3.1E+02 0.0067 34.7 15.1 194 109-306 94-306 (884)
195 PF03120 DNA_ligase_OB: NAD-de 47.9 15 0.00032 31.3 2.3 22 148-169 45-67 (82)
196 COG0272 Lig NAD-dependent DNA 47.1 33 0.00071 40.7 5.7 71 148-228 363-435 (667)
197 PF00389 2-Hacid_dh: D-isomer 46.4 2.3E+02 0.005 26.1 10.6 45 566-611 43-89 (133)
198 cd04728 ThiG Thiazole synthase 44.8 3.9E+02 0.0084 27.9 15.1 51 479-529 90-143 (248)
199 PRK11840 bifunctional sulfur c 44.4 3.2E+02 0.0069 29.8 12.2 52 478-529 163-217 (326)
200 COG0647 NagD Predicted sugar p 44.3 25 0.00055 37.3 3.9 47 484-530 15-61 (269)
201 CHL00200 trpA tryptophan synth 44.2 1E+02 0.0022 32.7 8.5 30 571-600 187-216 (263)
202 TIGR01524 ATPase-IIIB_Mg magne 44.1 6.8E+02 0.015 31.6 17.1 222 102-329 96-353 (867)
203 PRK00208 thiG thiazole synthas 43.7 4.1E+02 0.0088 27.8 15.8 52 478-529 89-143 (250)
204 PLN02591 tryptophan synthase 43.2 1.3E+02 0.0027 31.7 8.9 28 571-598 174-201 (250)
205 PF05822 UMPH-1: Pyrimidine 5' 42.2 73 0.0016 33.3 6.8 129 492-637 89-241 (246)
206 PRK10517 magnesium-transportin 41.9 8.3E+02 0.018 31.0 19.4 160 141-304 184-351 (902)
207 COG5547 Small integral membran 41.3 1.3E+02 0.0028 23.6 6.1 49 66-122 3-53 (62)
208 TIGR01452 PGP_euk phosphoglyco 40.7 28 0.0006 37.2 3.7 48 486-533 11-61 (279)
209 PRK11507 ribosome-associated p 40.1 34 0.00074 28.1 3.2 26 138-163 38-63 (70)
210 PRK15122 magnesium-transportin 40.0 7.3E+02 0.016 31.5 16.5 196 103-306 119-351 (903)
211 PRK14188 bifunctional 5,10-met 39.6 1.1E+02 0.0024 33.0 8.0 45 490-534 10-64 (296)
212 TIGR01494 ATPase_P-type ATPase 39.2 1.6E+02 0.0035 34.4 10.1 148 141-306 53-212 (499)
213 PF13242 Hydrolase_like: HAD-h 39.1 21 0.00046 29.5 2.0 51 579-631 15-73 (75)
214 TIGR00262 trpA tryptophan synt 38.9 1.3E+02 0.0028 31.7 8.3 41 490-530 121-163 (256)
215 PF06738 DUF1212: Protein of u 38.1 1.5E+02 0.0033 29.5 8.5 31 17-49 62-93 (193)
216 TIGR01657 P-ATPase-V P-type AT 37.4 1E+03 0.022 30.8 19.9 218 104-346 196-450 (1054)
217 PF01455 HupF_HypC: HupF/HypC 37.3 81 0.0018 25.8 5.0 32 134-165 16-50 (68)
218 PF13275 S4_2: S4 domain; PDB: 37.1 20 0.00044 29.0 1.5 24 138-161 34-57 (65)
219 PRK15424 propionate catabolism 36.8 3.3E+02 0.0072 32.2 11.9 69 497-595 95-164 (538)
220 PRK05585 yajC preprotein trans 36.6 2.1E+02 0.0046 25.7 8.0 27 115-141 35-61 (106)
221 TIGR01456 CECR5 HAD-superfamil 36.2 1.3E+02 0.0028 32.9 8.1 49 485-533 8-64 (321)
222 PRK14194 bifunctional 5,10-met 35.4 69 0.0015 34.6 5.6 45 490-534 12-65 (301)
223 PF12689 Acid_PPase: Acid Phos 35.2 65 0.0014 31.6 5.0 41 493-533 45-86 (169)
224 PF00122 E1-E2_ATPase: E1-E2 A 35.0 5E+02 0.011 26.4 12.0 20 156-175 42-61 (230)
225 TIGR01106 ATPase-IIC_X-K sodiu 34.9 9.7E+02 0.021 30.8 16.7 199 102-304 111-324 (997)
226 PF15584 Imm44: Immunity prote 34.9 18 0.00039 31.1 0.9 20 155-174 13-32 (94)
227 PF08069 Ribosomal_S13_N: Ribo 34.0 22 0.00048 28.2 1.2 47 5-51 11-59 (60)
228 PF12710 HAD: haloacid dehalog 34.0 21 0.00045 35.3 1.3 14 331-344 1-14 (192)
229 TIGR00612 ispG_gcpE 1-hydroxy- 33.2 79 0.0017 34.4 5.5 147 446-614 151-319 (346)
230 PRK14179 bifunctional 5,10-met 32.4 1.4E+02 0.0031 32.0 7.3 45 490-534 10-64 (284)
231 PRK14170 bifunctional 5,10-met 32.2 84 0.0018 33.6 5.5 45 490-534 10-63 (284)
232 TIGR00739 yajC preprotein tran 31.9 2.9E+02 0.0062 23.7 7.7 24 118-141 23-46 (84)
233 PRK01122 potassium-transportin 31.5 5.2E+02 0.011 31.5 12.7 81 100-189 64-147 (679)
234 PRK09140 2-dehydro-3-deoxy-6-p 31.2 3.9E+02 0.0085 27.1 10.1 146 445-613 21-181 (206)
235 PRK14175 bifunctional 5,10-met 31.1 87 0.0019 33.6 5.5 45 490-534 11-64 (286)
236 PRK14169 bifunctional 5,10-met 30.9 96 0.0021 33.2 5.7 45 490-534 9-62 (282)
237 PF14336 DUF4392: Domain of un 30.7 1.1E+02 0.0023 33.0 6.2 37 496-532 63-100 (291)
238 TIGR01662 HAD-SF-IIIA HAD-supe 29.5 1E+02 0.0022 28.4 5.2 40 493-533 83-126 (132)
239 TIGR01501 MthylAspMutase methy 29.3 97 0.0021 29.2 4.9 80 454-533 24-112 (134)
240 cd05017 SIS_PGI_PMI_1 The memb 29.1 87 0.0019 28.5 4.5 36 495-532 56-91 (119)
241 PRK14191 bifunctional 5,10-met 29.0 1E+02 0.0022 33.1 5.5 45 490-534 9-63 (285)
242 cd02071 MM_CoA_mut_B12_BD meth 28.9 59 0.0013 29.9 3.4 79 454-533 22-104 (122)
243 PRK14167 bifunctional 5,10-met 28.9 1E+02 0.0023 33.2 5.6 45 490-534 10-63 (297)
244 TIGR02250 FCP1_euk FCP1-like p 28.7 89 0.0019 30.2 4.7 42 491-533 56-97 (156)
245 cd00860 ThrRS_anticodon ThrRS 28.0 1.1E+02 0.0025 25.7 4.9 47 487-533 6-53 (91)
246 COG1188 Ribosome-associated he 27.6 71 0.0015 28.2 3.3 30 137-167 34-63 (100)
247 COG0078 ArgF Ornithine carbamo 27.5 5E+02 0.011 28.1 10.1 33 497-533 91-123 (310)
248 PRK14189 bifunctional 5,10-met 27.1 1.1E+02 0.0023 32.9 5.3 45 490-534 11-64 (285)
249 smart00532 LIGANc Ligase N fam 26.6 1.2E+02 0.0026 34.7 6.0 52 148-208 358-410 (441)
250 PRK14190 bifunctional 5,10-met 26.4 1.2E+02 0.0025 32.6 5.4 45 490-534 11-64 (284)
251 PRK00652 lpxK tetraacyldisacch 26.3 1.3E+02 0.0028 33.0 5.9 58 575-632 69-154 (325)
252 PRK14184 bifunctional 5,10-met 26.1 1.3E+02 0.0028 32.3 5.7 45 490-534 9-63 (286)
253 PRK04980 hypothetical protein; 26.0 76 0.0017 28.3 3.3 58 134-196 18-82 (102)
254 KOG3085 Predicted hydrolase (H 25.8 1.6E+02 0.0034 30.7 6.1 102 496-619 116-221 (237)
255 TIGR00739 yajC preprotein tran 25.8 1.2E+02 0.0026 26.0 4.4 41 108-165 10-50 (84)
256 PRK14174 bifunctional 5,10-met 25.8 1.3E+02 0.0029 32.3 5.8 45 490-534 9-63 (295)
257 COG0279 GmhA Phosphoheptose is 25.8 1.7E+02 0.0036 28.6 5.7 55 443-521 94-148 (176)
258 COG2179 Predicted hydrolase of 25.7 1.2E+02 0.0025 29.7 4.7 80 448-533 51-133 (175)
259 TIGR01459 HAD-SF-IIA-hyp4 HAD- 25.2 39 0.00085 35.1 1.7 26 495-521 140-165 (242)
260 PRK14182 bifunctional 5,10-met 25.0 1.4E+02 0.0031 31.8 5.8 45 490-534 9-62 (282)
261 PRK14178 bifunctional 5,10-met 24.9 2.5E+02 0.0055 30.0 7.6 62 565-626 130-201 (279)
262 TIGR02329 propionate_PrpR prop 24.8 7E+02 0.015 29.4 12.0 101 497-645 85-187 (526)
263 PRK05886 yajC preprotein trans 24.5 1.6E+02 0.0035 26.6 5.1 48 100-164 3-50 (109)
264 cd02067 B12-binding B12 bindin 24.3 80 0.0017 28.6 3.4 80 453-533 21-104 (119)
265 PRK14166 bifunctional 5,10-met 24.2 1.5E+02 0.0033 31.7 5.8 45 490-534 9-62 (282)
266 PRK13111 trpA tryptophan synth 23.8 8.7E+02 0.019 25.6 12.6 29 571-599 185-213 (258)
267 PF11694 DUF3290: Protein of u 23.7 2.8E+02 0.006 26.7 6.9 21 144-164 97-117 (149)
268 PRK00035 hemH ferrochelatase; 23.3 1.8E+02 0.0038 32.0 6.4 33 494-526 246-283 (333)
269 PRK14172 bifunctional 5,10-met 23.0 1.5E+02 0.0034 31.5 5.6 45 490-534 10-64 (278)
270 PF02699 YajC: Preprotein tran 23.0 1.1E+02 0.0024 26.0 3.7 12 152-163 36-47 (82)
271 cd06167 LabA_like LabA_like pr 22.7 2.5E+02 0.0054 26.3 6.6 27 576-602 114-140 (149)
272 PF06341 DUF1056: Protein of u 22.4 4.2E+02 0.0091 21.4 6.9 26 63-88 3-28 (63)
273 TIGR00575 dnlj DNA ligase, NAD 22.2 1.4E+02 0.003 36.2 5.6 52 149-209 352-404 (652)
274 PRK14176 bifunctional 5,10-met 22.2 1.4E+02 0.0031 32.0 5.1 45 489-533 15-69 (287)
275 PF02219 MTHFR: Methylenetetra 22.2 72 0.0016 34.3 3.0 39 483-521 72-111 (287)
276 PF09926 DUF2158: Uncharacteri 22.1 57 0.0012 25.3 1.6 12 154-165 2-13 (53)
277 PF06923 GutM: Glucitol operon 22.0 5.9E+02 0.013 23.0 8.6 64 104-176 8-72 (109)
278 TIGR01460 HAD-SF-IIA Haloacid 21.8 1E+02 0.0022 32.0 3.9 47 486-532 7-57 (236)
279 PRK14186 bifunctional 5,10-met 21.8 1.6E+02 0.0036 31.7 5.5 45 490-534 10-64 (297)
280 smart00306 HintN Hint (Hedgeho 21.6 98 0.0021 26.6 3.3 27 136-162 73-99 (100)
281 PRK14185 bifunctional 5,10-met 21.6 1.8E+02 0.0038 31.4 5.7 45 490-534 9-63 (293)
282 COG1862 YajC Preprotein transl 21.4 1.8E+02 0.004 25.7 4.7 47 101-164 9-55 (97)
283 cd05014 SIS_Kpsf KpsF-like pro 21.3 89 0.0019 28.5 3.1 26 496-521 61-86 (128)
284 PRK06769 hypothetical protein; 21.3 5.5E+02 0.012 24.9 8.9 38 494-533 92-132 (173)
285 PF03129 HGTP_anticodon: Antic 21.1 1.4E+02 0.0031 25.5 4.2 48 486-533 3-54 (94)
286 TIGR00677 fadh2_euk methylenet 20.7 2.4E+02 0.0053 30.1 6.6 41 481-521 59-100 (281)
287 TIGR00640 acid_CoA_mut_C methy 20.7 1.1E+02 0.0023 28.7 3.5 81 453-533 24-107 (132)
288 PRK09479 glpX fructose 1,6-bis 20.4 3E+02 0.0066 29.7 6.9 105 488-602 161-282 (319)
289 TIGR02253 CTE7 HAD superfamily 20.3 2.2E+02 0.0048 28.7 6.1 85 447-533 98-190 (221)
290 PRK05585 yajC preprotein trans 20.2 2.1E+02 0.0045 25.8 4.9 42 107-165 24-65 (106)
291 PRK14180 bifunctional 5,10-met 20.1 2E+02 0.0043 30.8 5.7 45 490-534 9-63 (282)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-143 Score=1188.96 Aligned_cols=818 Identities=28% Similarity=0.420 Sum_probs=682.4
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003103 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (847)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (847)
+.|..+.+|+++.|.++ ++|||++|+.+|+++||+|+++... .+.|+++++||.||+..+|++++++||++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 46778999999999998 6799999999999999999999755 788999999999999999999999999987
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe
Q 003103 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (847)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~ 175 (847)
.|.+++.|.+++++|+.++++|||++++++++|+++.++.++|+|+|+.+.++++||||||||.|+-||+||||.++++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCceEEEeccccCCCceeecCC--------------CCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCc
Q 003103 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (847)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~ 240 (847)
..++.||||+|||||.|+.|.. .|++|+||.|..|.++|+|+.||.+|++|++.+.++..+ +++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998775 6899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--hhhc---c-c---cchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhc
Q 003103 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (847)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~ 311 (847)
+|+.++.++..+.-.+.++++..+++ .|+. . + ..+.+.+..++++.+++||+|||++++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987652222222222222 2221 1 2 445567888999999999999999999999999999999
Q ss_pred CCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc-----------cCC------------------Ch--
Q 003103 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------KGV------------------EK-- 360 (847)
Q Consensus 312 ~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-----------~~~------------------~~-- 360 (847)
++++||+++++|+||.+++||+|||||||+|+|++.++++.... .++ ..
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999987752110 000 11
Q ss_pred -HHHHHHHHHhccc-----c------CcchHHHHHHHhcC-----ChH---H-----------HhccceEEEeecCCCCC
Q 003103 361 -EHVILLAARASRT-----E------NQDAIDAAIVGMLA-----DPK---E-----------ARAGVREVHFLPFNPVD 409 (847)
Q Consensus 361 -~~~l~~~~~~~~~-----~------~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~pf~s~~ 409 (847)
.+++..++.|... . .++|.|.|+...+. +.. . ....++...++||+++|
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 1234445544321 1 35788888876542 111 0 11223455899999999
Q ss_pred cceEEEEEcCCCc--EEEEEcCcHHHHHHhcCC------------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCC---
Q 003103 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE--- 472 (847)
Q Consensus 410 k~~~v~~~~~~g~--~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~--- 472 (847)
|+|++.+.+..++ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|||++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999866554 789999999999999953 34568899999999999999999999997663
Q ss_pred --------CCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--CCCcc
Q 003103 473 --------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL 542 (847)
Q Consensus 473 --------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~--~~~~~ 542 (847)
..+...|.+|+|+|++++.||||+|++++|+.|+++||||+|+||||..||.+|||++|+..+.. ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 12445789999999999999999999999999999999999999999999999999999975422 33455
Q ss_pred cCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhcc
Q 003103 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (847)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aa 621 (847)
+|.+. +.++++++++...+..+|+|++|++|.+||++||++|.+|||+|||+||+||||.|||||||| +|||+||+||
T Consensus 636 TG~ef-D~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEF-DDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhh-hcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 55544 578999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCccHHHHHHHHHHhhhh-hcccccCC
Q 003103 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF-MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 699 (847)
Q Consensus 622 Divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~ 699 (847)
|+||.||||++|+.|++|||.+|+|||+|+.|.++.|++.+..+ +...+..+.|++|+|+||+|+++|++ +++|++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99999999999999999999999999999999999999766554 44557788999999999999999987 89999999
Q ss_pred CCCC---CCCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc----------CCC------hh
Q 003103 700 VKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------RTR------PD 756 (847)
Q Consensus 700 ~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~------~~ 756 (847)
+++. ++|++. ....++...+..|.++++.++..|++.+... .+....+.. .+. ..
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~ 872 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDM 872 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhccc
Confidence 8764 233322 2355666677779999988887665554311 111100000 000 01
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCcccc---chHHHHHHHHHHHHHHHHhhhccccccccccccccChhhHHHHHHH
Q 003103 757 EMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSVHDFSWYLFI 833 (847)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 833 (847)
...|+.|..+++...+|.+++||...+.+.. .|.|+++++.++.+. ++..+|.++.+.+|.+.++++.+|.+++.+
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~-~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVL-HFLVLYVPPLQRIFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHh-hheEEEechhhhhheecCCcHHHHHHHHHH
Confidence 2247889999999999999999988655443 255898888877554 777889999999999999999999999988
Q ss_pred Hhhh--HHHHHHhhc
Q 003103 834 ETSS--LSEMMHLFQ 846 (847)
Q Consensus 834 ~~~~--f~~~~~~~~ 846 (847)
..+. +||..|++.
T Consensus 952 s~~V~i~dEilK~~~ 966 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIA 966 (972)
T ss_pred hhhhhhHHHHHHHHH
Confidence 8776 899999874
No 2
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-139 Score=1125.87 Aligned_cols=802 Identities=86% Similarity=1.293 Sum_probs=777.5
Q ss_pred hhhhcccCcccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 003103 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (847)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 88 (847)
++..+++..+....+.||+++.|.++..|||++|+++|+++||+|++++++.+.+++|+..||||+.|++..++++.+.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeec
Q 003103 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (847)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vP 168 (847)
..+++.+++|.++..|..++++|+.++|+||+++.++.++|++.+.++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCCCchHHHHHHH
Q 003103 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (847)
Q Consensus 169 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~ 248 (847)
||+++++|+-++||+|.|||||.|+.|++||.+|+||+|.+|++.++|++||.+|..||.++++.++.+..+|++.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCe
Q 003103 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (847)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v 328 (847)
++++++.+++.+++.+.++|+.+.+.+.....+.+.+++..+|.++|.++++.+++|+.||+++|.++|+..++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999888999888888998888888889999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCC
Q 003103 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (847)
Q Consensus 329 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~ 408 (847)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+.+++.+++|.+|.|+++.+.||++.+.+++.++++|||+.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888788899999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEe
Q 003103 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (847)
Q Consensus 409 ~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i 488 (847)
.||.+..+.+++|+++.++|||||.|++.|+.+.++++...+.+++|+++|+|.+++|++..++...+.....++|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888999999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
-+-||||.++.++|++....|++|+|+|||....++..++++|+..|.++++.+.|...++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHH
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~ 648 (847)
+.|+||+++|+.||++||.|+|+|||+||+||||.||+|||+..++|+|+.+||+|++++.++.|+.++..+|.+|+||+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 003103 649 NYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728 (847)
Q Consensus 649 ~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 728 (847)
.|..|+++..+-+++.++...+.|.+.|+|++++++.+++|++.|++++|+.+|+|.|.+|+++.+|...+++|.+++++
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhhh
Q 003103 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHL 808 (847)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (847)
+..+||....+.+|+..++.....+...+.....|+.+++.+++.+|.+|++.|+|.++|+++|+++++.+++++++++.
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988999988888777777777778889999999999999999999999999999999999999999999988
Q ss_pred cc
Q 003103 809 TN 810 (847)
Q Consensus 809 ~~ 810 (847)
|.
T Consensus 808 ya 809 (942)
T KOG0205|consen 808 YA 809 (942)
T ss_pred Hh
Confidence 75
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=2.9e-134 Score=1207.12 Aligned_cols=752 Identities=59% Similarity=0.936 Sum_probs=671.9
Q ss_pred CCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 003103 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (847)
Q Consensus 37 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~ 116 (847)
|||++|+++|+++||+|+++.++++.|+.|+++|++|++++|+++++++++++ +|.+++++++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888999999999999999999999999976 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecC
Q 003103 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (847)
Q Consensus 117 ~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~ 196 (847)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999976999999999999999999
Q ss_pred CCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccch
Q 003103 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (847)
Q Consensus 197 ~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (847)
++|.+|+||.|.+|+++++|++||.+|++|+|.+++++++ +++++|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998876 667999999999988665544433333333333256778
Q ss_pred HhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc
Q 003103 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (847)
Q Consensus 276 ~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~ 355 (847)
..++.+++++++++|||+||++++++++.+++||+|+|+++|+++++|+||++|++|||||||||+|+|+|.++.. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred cCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEEEEcCC-CcEEEEEcCcHHHH
Q 003103 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (847)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~-g~~~~~~KGa~e~i 434 (847)
.+.+.++++.+++.++....+||++.|+++++.+....+..++..+.+||++.+|+|++++++.+ |+.++++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23567778888887765566799999999987655444566888899999999999999887654 77788999999999
Q ss_pred HHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEE
Q 003103 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (847)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~m 514 (847)
+++|+...+.++++++.+++++++|+|++++|+++ .|++|+|+|+++++||+|||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766777888899999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCC
Q 003103 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (847)
Q Consensus 515 iTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG 594 (847)
+||||+.||.++|+++||..+......+....+.+.++++++++.++++++|||++|+||.++|+.||++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976433333333333445678889999999999999999999999999999999999999999
Q ss_pred cCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003103 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF 674 (847)
Q Consensus 595 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~ 674 (847)
+||+||||+||||||||+|+|+||++||+||++|||++|++++++||++|+||+|++.|.++.|+..++.++...+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777777767778
Q ss_pred CccHHHHHHHHHHhhhhhcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Q 003103 675 DFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754 (847)
Q Consensus 675 ~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (847)
+++|+|++|+|+++|++++++++|+++|+++|++|...+++..+++.|+++++.+|++|++.+...++....+. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999999999999999999999999999999999999999999999888777642222111111 113
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhhh
Q 003103 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHL 808 (847)
Q Consensus 755 ~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (847)
..+++|++|+.++++|++++|++|+++.+|+++|++++++++++..++.++++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999999999999999999999999999999998888777664
No 4
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6e-134 Score=1217.38 Aligned_cols=805 Identities=26% Similarity=0.418 Sum_probs=681.9
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003103 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (847)
...++.+.++++++++++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++
T Consensus 47 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------ 120 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120 (902)
T ss_pred HHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc------
Confidence 34678899999999999999999999999999999999998875 56788999999999999999999999875
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC------CeEEEEeCCCCCCCcEEEEcCCCeecc
Q 003103 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPA 169 (847)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiV~l~~G~~vPa 169 (847)
+|.++++|+++++++..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+|||
T Consensus 121 -~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 121 -DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 8999999999999999999999999999999999999999999999 789999999999999999999999999
Q ss_pred ceEEEeeCceEEEeccccCCCceeecCCCC-------------ccccceeeeeceEEEEEEeccchhHhhhHHHhhhcc-
Q 003103 170 DARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (847)
Q Consensus 170 D~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 235 (847)
||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++|+|+++++++
T Consensus 200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~ 279 (902)
T PRK10517 200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279 (902)
T ss_pred eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence 999999988999999999999999998874 799999999999999999999999999999999876
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCce
Q 003103 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (847)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (847)
++++++|+.+++++++++.+.++...+. ++.+...+.+|.+++..++++++++|||+||++++++++.|+.||+|+|++
T Consensus 280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v-~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~il 358 (902)
T PRK10517 280 SEPNAFQQGISRVSWLLIRFMLVMAPVV-LLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVI 358 (902)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 4679999999999877554433322222 222223345788899999999999999999999999999999999999999
Q ss_pred eccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcccc--CcchHHHHHHHhcCCh--H
Q 003103 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--K 391 (847)
Q Consensus 316 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~ai~~~~~~~--~ 391 (847)
+|+++++|++|++|++|||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++... .
T Consensus 359 Vk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~ 435 (902)
T PRK10517 359 VKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESAR 435 (902)
T ss_pred EecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchh
Confidence 999999999999999999999999999999987531 12344566777766654322 4699999999876432 2
Q ss_pred HHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCe
Q 003103 392 EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLR 461 (847)
Q Consensus 392 ~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r 461 (847)
.....++.++++||+|.+|+|+++++..++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~r 515 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLR 515 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCE
Confidence 2345678899999999999999988766677889999999999999963 234456777888999999999
Q ss_pred EEEEEeeecCCCCC---CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003103 462 SLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 538 (847)
Q Consensus 462 vl~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~ 538 (847)
++++||++++..+. ...|++++|+|+++|+||+|||++++|++||++||+|+|+||||+.||.++|+++||..
T Consensus 516 vlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---- 591 (902)
T PRK10517 516 VVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA---- 591 (902)
T ss_pred EEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----
Confidence 99999998754321 12378999999999999999999999999999999999999999999999999999952
Q ss_pred CCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh
Q 003103 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (847)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~ 618 (847)
...+.|.+. +.++++++++.++++.||||++|+||.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||
T Consensus 592 ~~v~~G~el-~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAk 670 (902)
T PRK10517 592 GEVLIGSDI-ETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670 (902)
T ss_pred cCceeHHHH-HhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHH
Confidence 244555544 4788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHHhhhhhccccc
Q 003103 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISK 697 (847)
Q Consensus 619 ~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~l~~ 697 (847)
++||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|++++++++
T Consensus 671 eaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~ 750 (902)
T PRK10517 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPF 750 (902)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcC
Confidence 9999999999999999999999999999999999999999988887777766666 699999999999999988999999
Q ss_pred CCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhh
Q 003103 698 DRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIF 775 (847)
Q Consensus 698 ~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~ 775 (847)
|++++.. +|++|+...+.+.+++.|++.+++++..|++++.. ++... .......++..|.+++++|.++++
T Consensus 751 d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~ 823 (902)
T PRK10517 751 DNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVH 823 (902)
T ss_pred CCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHH
Confidence 9998873 67778877788888888999888887766665321 11000 001123556779999999999999
Q ss_pred hhccCC-CCccccchHHHHHHHHHHHHHHHHhhhccccccccccccccC--hhhHHHHHHHHhhhHHHHHHhhc
Q 003103 776 VTRSRS-WSFIERPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVS--VHDFSWYLFIETSSLSEMMHLFQ 846 (847)
Q Consensus 776 ~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~f~~~~~~~~ 846 (847)
++|+++ ++|.+++.+..++..++.+++.+.+++. +....|++.+++ +..|.+.+.+....++|.+|.+|
T Consensus 824 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~K~~~ 895 (902)
T PRK10517 824 MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFS--PLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFY 895 (902)
T ss_pred hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHH--HHHHhhCCcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 4444334333333333333332333222 334457888888 78888888888888999999875
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.4e-132 Score=1207.70 Aligned_cols=811 Identities=26% Similarity=0.428 Sum_probs=673.3
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----
Q 003103 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG---- 91 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~---- 91 (847)
...|+.+.+|+++.++++.+|||++|+++|+++||+|+++.++ +++|+.|+++|++|+.++|+++++++++++..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4478899999999999999999999999999999999999876 55788899999999999999999999997531
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC------CeEEEEeCCCCCCCcEEEEcCCC
Q 003103 92 GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGD 165 (847)
Q Consensus 92 ~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiV~l~~G~ 165 (847)
.+...+|.++++|+++++++..++++||++++++.++|+++.+++++|+|| |++++|+++||||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 122347899999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred eeccceEEEeeCceEEEeccccCCCceeecCC-----------------------CCccccceeeeeceEEEEEEeccch
Q 003103 166 IVPADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVH 222 (847)
Q Consensus 166 ~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------~~~v~~Gt~v~~G~~~~~V~~tG~~ 222 (847)
+|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999888999999999999999975 2689999999999999999999999
Q ss_pred hHhhhHHHhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHH
Q 003103 223 TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (847)
Q Consensus 223 T~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~ 302 (847)
|++|||.+++.+.+.++++++.++++++++..+..+.+.+ +++.......+|.+++.+++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~-v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPV-VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 9999999999876667899999998887644332222221 122222234578889999999999999999999999999
Q ss_pred HHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccc--cCcchHH
Q 003103 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAID 380 (847)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~ 380 (847)
+.|+.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+.+. ..+.++++++.+++.++.. ..+||++
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 9999999999999999999999999999999999999999999988652 2233455677666654322 2469999
Q ss_pred HHHHHhcCCh--HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC----------ChHHHHHH
Q 003103 381 AAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKV 448 (847)
Q Consensus 381 ~ai~~~~~~~--~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~ 448 (847)
.|++.++... ......++.++++||++.+|+|++++++.+|++++++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 9999886432 12234678899999999999999998876788899999999999999963 23345677
Q ss_pred HHHHHHHHHccCeEEEEEeeecCCCC-----CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 003103 449 HAVIDKFAERGLRSLGVARQEIPEKT-----KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG 523 (847)
Q Consensus 449 ~~~~~~~~~~G~rvl~~a~~~~~~~~-----~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA 523 (847)
.+..++++++|+|++++||++++..+ .+..|++++|+|+++++||+|||++++|++||++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 88889999999999999999876432 1235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhh
Q 003103 524 KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK 603 (847)
Q Consensus 524 ~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~ 603 (847)
.++|+++||.. ...++|.+. +.++++++++.+++++||||++|+||.++|+.||++|++|+|+|||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el-~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEI-EAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhh-hhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 234555444 4788899999999999999999999999999999999999999999999999999
Q ss_pred cCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHH
Q 003103 604 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVL 682 (847)
Q Consensus 604 AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~l 682 (847)
||||||||+|+|+||++||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987776666555555 799999999
Q ss_pred HHHHHhhhhhcccccCCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHH
Q 003103 683 IIAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMA 760 (847)
Q Consensus 683 ~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 760 (847)
|+|+++|++++++++|++++.. +|++|..+.+-+.+++.|+..+++++..|++.+.. +. .+. . +.....+|
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t 808 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQS 808 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHH
Confidence 9999999889999999988764 67777665555555567777777776655543210 10 010 0 00113568
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhhhcccc--ccccccccccChhhHHHHHHHHhhh-
Q 003103 761 ALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHLTNLN--TTIHMGSSFVSVHDFSWYLFIETSS- 837 (847)
Q Consensus 761 ~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~- 837 (847)
..|++++++|.+++|++|+++.++++++ ++...++.+.++ .++..|.++ ....|++.++++.+|.+++.+....
T Consensus 809 ~~f~~l~~~q~~~~~~~R~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~ 885 (903)
T PRK15122 809 GWFIEGLLSQTLVVHMLRTQKIPFIQST--AALPVLLTTGLI-MAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYC 885 (903)
T ss_pred HHHHHHHHHHHHHHHhhCcCCCCcCcch--HHHHHHHHHHHH-HHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999874444444 333333333232 222333332 4456889999999998887766554
Q ss_pred -HHHHHHhhc
Q 003103 838 -LSEMMHLFQ 846 (847)
Q Consensus 838 -f~~~~~~~~ 846 (847)
..|..|+|+
T Consensus 886 ~~~e~~k~~~ 895 (903)
T PRK15122 886 LVAQGMKRFY 895 (903)
T ss_pred HHHHHHHHHH
Confidence 588887654
No 6
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1e-132 Score=1220.93 Aligned_cols=817 Identities=25% Similarity=0.364 Sum_probs=671.3
Q ss_pred cCcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Q 003103 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG 92 (847)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 92 (847)
+..+||.++.+|++++|+++ .+|||++||++|+++||+|+++.++ +++|+.|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45789999999999999998 5799999999999999999999876 577899999999999999999999999976
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceE
Q 003103 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (847)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ 172 (847)
+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCceEEEeccccCCCceeecCCC---------------CccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-
Q 003103 173 LLEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (847)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~- 236 (847)
|++++++.||||+|||||.||.|.+. |++|+||.|.+|+++++|++||.+|++|||++++.+.+
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998899999999999999999642 57899999999999999999999999999999885432
Q ss_pred -----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHH
Q 003103 237 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281 (847)
Q Consensus 237 -----------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (847)
.++|+|+.++++++++.++.++..++.+++.+. ..+...+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHH
Confidence 138999999999887544333322222221111 123466778
Q ss_pred HHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeee---c---c
Q 003103 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV---F---A 355 (847)
Q Consensus 282 ~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~---~---~ 355 (847)
+++++++++|++||++++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 899999999999999999999999999999999999999999999999999999999999999999875421 0 0
Q ss_pred --cCC---------------------------------------C---------hHHHHHHHHHhccc------------
Q 003103 356 --KGV---------------------------------------E---------KEHVILLAARASRT------------ 373 (847)
Q Consensus 356 --~~~---------------------------------------~---------~~~~l~~~~~~~~~------------ 373 (847)
.++ + ..+++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 01245555555421
Q ss_pred cCcchHHHHHHHhcCCh----------HHH-------------------hccceEEEeecCCCCCcceEEEEEcCCC-cE
Q 003103 374 ENQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NW 423 (847)
Q Consensus 374 ~~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~~~~~pf~s~~k~~~v~~~~~~g-~~ 423 (847)
..+||+|.|++.++... .+. ...+++++.+||+|+||||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12599999998875210 011 2346789999999999999999986544 47
Q ss_pred EEEEcCcHHHHHHhcCC------------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC------------CCCCC
Q 003103 424 HRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPG 479 (847)
Q Consensus 424 ~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~------------~~~~e 479 (847)
++++|||||.|+++|+. +++.++.+.+.+++|+++|+||+++|||+++..+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 89999999999999963 2344677888999999999999999999886431 23468
Q ss_pred CCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--------CCCcccCccccccC
Q 003103 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQDKDASI 551 (847)
Q Consensus 480 ~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~--------~~~~~~~~~~~~~~ 551 (847)
++|+|+|+++++||+|+|++++|++||++||+|+|+||||+.||.++|+++||..+.. ...+++|.+. +.+
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l-~~l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQF-DAL 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHh-hhc
Confidence 8999999999999999999999999999999999999999999999999999964210 1123444433 467
Q ss_pred CcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCCh
Q 003103 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 630 (847)
Q Consensus 552 ~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~ 630 (847)
+++++++++++..||||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|++|||
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 788899999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHHhhhh-hcccccCCCCCC
Q 003103 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS 703 (847)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~ 703 (847)
++|+.++++||++|+|++|++.|.++.|+..++.++++.++. ++|++|+|++|+|+++|++ ++++++|++++.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999998877776665542 3689999999999999964 899999987653
Q ss_pred -----CCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccc----cccccccCCChhHHHHHHHHHHHHH
Q 003103 704 -----PQPD--SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT---DFFSD----AFGVRSLRTRPDEMMAALYLQVSII 769 (847)
Q Consensus 704 -----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~t~~f~~~~~~ 769 (847)
|+++ +...++++..+++.|+++++.++..|++.++. +...+ +++. ......+++|++|.+++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHA--GCNDVFKARSAAFATMTFC 949 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccc--cccchhhhHHHHHHHHHHH
Confidence 2222 22235677778888999999888777654321 00000 0000 0012346789999999999
Q ss_pred HHHHhhhhccCCCCccc------------------cchHHHHHHHHHHHHHHHHhhhccccccc-cccccccChhhHHHH
Q 003103 770 SQALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVRVHFHLTNLNTTI-HMGSSFVSVHDFSWY 830 (847)
Q Consensus 770 ~~~~~~~~rs~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 830 (847)
|++++|++|+++.+.++ ..|++++++++++.++ .++.+|.++... +|++.++++ .|.++
T Consensus 950 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l-~~~~~~~p~~~~~~f~~~~l~~-~w~~~ 1027 (1053)
T TIGR01523 950 ALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVS-AFPTIYIPVINDDVFKHKPIGA-EWGLA 1027 (1053)
T ss_pred HHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHH-HHHHHhhhhhhhhhhccCCcch-HHHHH
Confidence 99999999997643221 1456888888777666 445556665654 799999996 68777
Q ss_pred HHHHhh--hHHHHHHhhc
Q 003103 831 LFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 831 l~i~~~--~f~~~~~~~~ 846 (847)
+.+.+. .++|.+|++.
T Consensus 1028 ~~~~~~~~~~~e~~K~~~ 1045 (1053)
T TIGR01523 1028 AAATIAFFFGAEIWKCGK 1045 (1053)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 665554 5899999874
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.8e-132 Score=1203.09 Aligned_cols=804 Identities=26% Similarity=0.407 Sum_probs=678.7
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003103 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (847)
...|+.+.+++++.++++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++.+
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 45779999999999999999999999999999999999998765 57889999999999999999999999875
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE------CCeEEEEeCCCCCCCcEEEEcCCCeecc
Q 003103 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPA 169 (847)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------dg~~~~I~~~~Lv~GDiV~l~~G~~vPa 169 (847)
+|.++++|+++++++..++++||+|++++.++|+++.+++++|+| ||++++|+++||||||+|.+++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ceEEEeeCceEEEeccccCCCceeecCCCC-------------ccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC
Q 003103 170 DARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 236 (847)
Q Consensus 170 D~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 236 (847)
||++++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+.+++.+.+
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999987899999999999999998864 6999999999999999999999999999999998866
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCcee
Q 003103 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (847)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (847)
+++++|+.++++++++..+.++...+. ++.+.....+|..++..++++++++|||+||++++++++.++.||+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVV-LMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHh-eehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 778999999999987654443322222 2222233457888899999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccc--cCcchHHHHHHHhcCCh--HH
Q 003103 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KE 392 (847)
Q Consensus 317 k~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~ 392 (847)
|+++++|+||++|++|||||||||+|+|+|.+... ..+.+.++++..++.++.. ..+||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 99999999999999999999999999999988642 2234456667666654432 23599999999886532 22
Q ss_pred HhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeE
Q 003103 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRS 462 (847)
Q Consensus 393 ~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rv 462 (847)
.+..++.++.+||+|.+|+|++++++.++.+++++||+||.++++|+. +++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998765666789999999999999963 2344667888889999999999
Q ss_pred EEEEeeecCCCCC---CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC
Q 003103 463 LGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539 (847)
Q Consensus 463 l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~ 539 (847)
+++||++++..+. +..|++|+|+|+++++||+|||++++|++||++||+|+|+||||+.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998765321 12478899999999999999999999999999999999999999999999999999963 2
Q ss_pred CcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhh
Q 003103 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 619 (847)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~ 619 (847)
..+.|.+. +.++++++++.+++++||||++|+||.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l-~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADI-EELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhh-hhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 34455443 46788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHHhhhhhcccccC
Q 003103 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 698 (847)
Q Consensus 620 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~l~~~ 698 (847)
+||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+|+++|++++++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999988877766665555 7999999999999999889999999
Q ss_pred CCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhhh
Q 003103 699 RVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFV 776 (847)
Q Consensus 699 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 776 (847)
++++.. +|++|..+.+.+.+++.|++.+++++..|++++...... + . ......+|..|++++++|.+++|+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~---~-~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSAN---T---V-EEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c---h-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 988763 566677777777778889888877776665543211000 0 0 012335788999999999999999
Q ss_pred hccCCCCccccchHHHHHHHHHHHHHHHHhhhcccc--cccccccccc--ChhhHHHHHHHHhhhHHHHHHhhc
Q 003103 777 TRSRSWSFIERPGLLLATAFVIAQLVRVHFHLTNLN--TTIHMGSSFV--SVHDFSWYLFIETSSLSEMMHLFQ 846 (847)
Q Consensus 777 ~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~l~i~~~~f~~~~~~~~ 846 (847)
+|+++.++++|+ +++.+++.+.++.. +..|.++ ....|++.++ ++..|.+++.+....+.|+.|+|+
T Consensus 790 ~R~~~~~~~~n~--~~~~~~~~~~~~~~-~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~ 860 (867)
T TIGR01524 790 IRTEKIPFIQSR--AAAPVMIATLLVMA-LGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYMATMQLVKTFY 860 (867)
T ss_pred hCcCCCCcCcch--HHHHHHHHHHHHHH-HHHHhchhhhhhhhccccCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999874444454 34444443333322 2233222 2456888877 556788887777778899999775
No 8
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-132 Score=1202.96 Aligned_cols=807 Identities=30% Similarity=0.485 Sum_probs=680.3
Q ss_pred CcccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 003103 16 SVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG 91 (847)
Q Consensus 16 ~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~ 91 (847)
...||..+.+ ++...+.++ .+|||++|+.+|+++||+|+++..+ .+.|..|+++|++|+.++|+++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4568888888 999999877 6799999999999999999999765 678999999999999999999999999976
Q ss_pred CCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 003103 92 GGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (847)
Q Consensus 92 ~~~~~~~----~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~v 167 (847)
.| .++..|+.++++|++++++||+|+++++++++++.+++++|+|||++++|+++||||||||++++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 55 566688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeeCceEEEeccccCCCceeecCC--------------CCccccceeeeeceEEEEEEeccchhHhhhHHHhhh
Q 003103 168 PADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233 (847)
Q Consensus 168 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 233 (847)
|||++|+++++++||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||++|++|+++.++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999888999999999999999963 478999999999999999999999999999999999
Q ss_pred cc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcC
Q 003103 234 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 312 (847)
Q Consensus 234 ~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~ 312 (847)
.. ...+++++.+++++.+++.+.+++.++.++..++..+.+|...+.++++++++++|++||+.++++++.++.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 68899999999999886655555444433333332233488999999999999999999999999999999999999
Q ss_pred CceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCC------h---HHHHHHHHHhccc--c------C
Q 003103 313 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---EHVILLAARASRT--E------N 375 (847)
Q Consensus 313 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~------~---~~~l~~~~~~~~~--~------~ 375 (847)
++++|+++++|+||++|+||+|||||||+|+|+|.+++........+ . .+++..++.|+.. . .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999988642011111 1 1245555556522 2 4
Q ss_pred cchHHHHHHHhcC------ChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-------Ch
Q 003103 376 QDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------RE 442 (847)
Q Consensus 376 ~~~~~~ai~~~~~------~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-------~~ 442 (847)
+||+|.|++.++. +.......+++++++||+|+||||++++++.+|++++++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 6999999999874 3444556667899999999999999999977777999999999999999973 45
Q ss_pred HHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC----CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC
Q 003103 443 DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518 (847)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD 518 (847)
+.++.+.+..++|+++||||+++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 678899999999999999999999998765443 5689999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCh
Q 003103 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598 (847)
Q Consensus 519 ~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~ 598 (847)
|+.||++||++||+..+......++|.+ .+.++++++.+.++++.||||+||+||.++|+.||++|++|+|||||+||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~e-l~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAE-LDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHH-hhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 9999999999999875432212444444 346778899999999999999999999999999999999999999999999
Q ss_pred hhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhc-CC
Q 003103 599 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWK-FD 675 (847)
Q Consensus 599 ~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~-~~~~-~~ 675 (847)
||||+|||||||| +|+|+||+|||+++.+|+|++|+.++++||++|.|++|++.|.++.|+..++.++++. +..+ +|
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999998 7999999999999999999999999999999999999999999999998666655554 4444 68
Q ss_pred ccHHHHHHHHHHhhhh-hcccccCCCCC------CCCCCc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 003103 676 FSPFMVLIIAILNDGT-IMTISKDRVKP------SPQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (847)
Q Consensus 676 ~~~~~~l~~~l~~~~~-~~~l~~~~~~~------~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (847)
++|+|++|+|+++|++ +++++.+++++ +++|++ |..+.++++++..|+..++..++.|.+.+...... ..
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 810 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIAN-TL 810 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc
Confidence 9999999999999985 78887775322 223444 55566666678888888888887777665322110 00
Q ss_pred cccccCC-ChhHHHHHHHHHHHHHHHHHhhhhccCCCCcccc---chHHHHHHHHHHHHHHHHhhhcccccccccccccc
Q 003103 747 GVRSLRT-RPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFV 822 (847)
Q Consensus 747 ~~~~~~~-~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (847)
+. + .....+|+.|..++++++++.+.+|+.+.++++. +++.++.++++..++..+..+.++.....|.+.++
T Consensus 811 ~~----~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~ 886 (917)
T COG0474 811 GL----DLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPL 886 (917)
T ss_pred ch----hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCC
Confidence 00 0 1456789999999999999999999987666554 57777777777766655555544444357888888
Q ss_pred ChhhHHHHHHHHh
Q 003103 823 SVHDFSWYLFIET 835 (847)
Q Consensus 823 ~~~~~~~~l~i~~ 835 (847)
++..|.+++.+..
T Consensus 887 ~~~~~~~~~~~~~ 899 (917)
T COG0474 887 SLFEWLIAIAVAL 899 (917)
T ss_pred cHHHHHHHHHHHH
Confidence 8778887776663
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.9e-127 Score=1178.87 Aligned_cols=836 Identities=22% Similarity=0.352 Sum_probs=677.1
Q ss_pred chhhhccc-CcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHH
Q 003103 8 SLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIM 84 (847)
Q Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il 84 (847)
++++.+.. ..+||.++.++++++|+++ .+|||++||++|+++||+|+++.++ .+.|+.|+++|++|++++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l 84 (997)
T TIGR01106 5 DLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAIL 84 (997)
T ss_pred hhhhhhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 44554444 4679999999999999998 6699999999999999999998765 4578899999999999999999999
Q ss_pred HHHHhc-C-----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcE
Q 003103 85 AIALAN-G-----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDV 158 (847)
Q Consensus 85 ~~~~~~-~-----~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDi 158 (847)
+++... . .....+|+++++++++++++++++++||+|+++++++++++.+++++|+|||++++|+++||||||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDi 164 (997)
T TIGR01106 85 CFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDL 164 (997)
T ss_pred HHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCE
Confidence 887532 1 1123478899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCC----------ccccceeeeeceEEEEEEeccchhHhhhH
Q 003103 159 ISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKA 228 (847)
Q Consensus 159 V~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i 228 (847)
|.|++||+|||||++++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+|++
T Consensus 165 v~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i 244 (997)
T TIGR01106 165 VEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244 (997)
T ss_pred EEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHH
Confidence 99999999999999999977899999999999999998864 69999999999999999999999999999
Q ss_pred HHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 003103 229 AHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307 (847)
Q Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~ 307 (847)
.+++++.+ +++++++.++++.+.+....++..++ +++.+...+.+|.+.+.+++++++++|||+||++++++++.+++
T Consensus 245 ~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~ 323 (997)
T TIGR01106 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 323 (997)
T ss_pred HhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHH
Confidence 99887654 67899999999888755443332222 22222334567888888999999999999999999999999999
Q ss_pred HhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeec--c-cC--------CCh-----HHHHHHHHHhc
Q 003103 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A-KG--------VEK-----EHVILLAARAS 371 (847)
Q Consensus 308 ~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~--------~~~-----~~~l~~~~~~~ 371 (847)
+|+++|+++|+++++|+||+++++|||||||||+|+|+|.+++.... . .+ .+. +.++..++.|+
T Consensus 324 ~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn 403 (997)
T TIGR01106 324 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCN 403 (997)
T ss_pred HHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999998764210 0 00 111 23555566654
Q ss_pred cc---------------cCcchHHHHHHHhcC----ChHHHhccceEEEeecCCCCCcceEEEEEcC---CCcEEEEEcC
Q 003103 372 RT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKG 429 (847)
Q Consensus 372 ~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~---~g~~~~~~KG 429 (847)
.. ..+||+|.|+++++. +..+.+..++.++.+||+|+||||++++... ++++++++||
T Consensus 404 ~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KG 483 (997)
T TIGR01106 404 RAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKG 483 (997)
T ss_pred CCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeC
Confidence 21 125899999998753 3344566788999999999999999887632 2467899999
Q ss_pred cHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC--------C---CCCCCceEEEEe
Q 003103 430 APEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------E---SPGAPWQLVGLL 488 (847)
Q Consensus 430 a~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~--------~---~~e~~l~~lG~i 488 (847)
|||.|+++|+. +++.++.+.+.+++++++|+||+++||+++++++. + ..|++|+|+|++
T Consensus 484 Ape~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli 563 (997)
T TIGR01106 484 APERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLI 563 (997)
T ss_pred ChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEE
Confidence 99999999962 23456778889999999999999999998864321 1 237899999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------------CCcccCcc
Q 003103 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQD 546 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~----------------------~~~~~~~~ 546 (847)
+++||||+|++++|++|+++||+++|+|||++.||.++|+++|+..+... ..++.|.+
T Consensus 564 ~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~ 643 (997)
T TIGR01106 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSD 643 (997)
T ss_pred eccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHH
Confidence 99999999999999999999999999999999999999999999643110 01333333
Q ss_pred ccccCCcchHHHHHHhcC--eEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccCE
Q 003103 547 KDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDI 623 (847)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDi 623 (847)
.+.++++++++.++++. ||||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||+
T Consensus 644 -l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADi 722 (997)
T TIGR01106 644 -LKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 722 (997)
T ss_pred -hhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhce
Confidence 34567788899888775 99999999999999999999999999999999999999999999999 799999999999
Q ss_pred EEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCccHHHHHHHHHHhhhh-hcccccCCCC
Q 003103 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVK 701 (847)
Q Consensus 624 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~ 701 (847)
+|+||||++|++++++||++|+|+++++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|.+ ++++++|+++
T Consensus 723 vL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~ 802 (997)
T TIGR01106 723 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAE 802 (997)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999877766665544 55689999999999999974 7999998877
Q ss_pred CC---CCCCcc-----cHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-cccccc-ccc---------cccCCC-------
Q 003103 702 PS---PQPDSW-----KLKEIF-ATGVVLGSYLAIMTVVFFWLMRKT-DFFSDA-FGV---------RSLRTR------- 754 (847)
Q Consensus 702 ~~---~~~~~~-----~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~~~---------~~~~~~------- 754 (847)
+. ++|+++ ..++++ .+.+..|+++++..++.|++.+.. ++.... +++ .+..+.
T Consensus 803 ~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (997)
T TIGR01106 803 SDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTY 882 (997)
T ss_pred cccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccch
Confidence 54 223222 123334 344566999998888777655421 211100 110 000000
Q ss_pred ------hhHHHHHHHHHHHHHHHHHhhhhccCCCCcc--ccchHHHHHHHHHHHHHHHHhhhccccccccccccccChhh
Q 003103 755 ------PDEMMAALYLQVSIISQALIFVTRSRSWSFI--ERPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSVHD 826 (847)
Q Consensus 755 ------~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (847)
..+.+|++|.+++++|.++++++|+++.+++ ..+|++++.++++.+++..++ .|.++....|++.++++.+
T Consensus 883 ~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~ 961 (997)
T TIGR01106 883 EQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTW 961 (997)
T ss_pred hcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHH
Confidence 0156899999999999999999999764432 245667777777665554444 4444445678999999999
Q ss_pred HHHHHHHHhh--hHHHHHHhhc
Q 003103 827 FSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 827 ~~~~l~i~~~--~f~~~~~~~~ 846 (847)
|.+++.+.+. .++|.+|++.
T Consensus 962 w~~~~~~~~~~~~~~~~~k~~~ 983 (997)
T TIGR01106 962 WFCAFPYSLLIFVYDEIRKLII 983 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999777654 4888888764
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.3e-126 Score=1162.19 Aligned_cols=798 Identities=27% Similarity=0.409 Sum_probs=672.8
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-cchHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 003103 17 VDLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGG 92 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~~~~il~~~~~~~~ 92 (847)
.+||.++.++++++|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|++++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 468999999999999998 56999 99999999999999999876 56788899999 9999999999999999976
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceE
Q 003103 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (847)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ 172 (847)
.|.+++.++++++++..++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCceEEEeccccCCCceeecCCCC--------------ccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-C
Q 003103 173 LLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-Q 237 (847)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~ 237 (847)
+++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+|++.+++++.+ +
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999977999999999999999998863 7999999999999999999999999999999988764 6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceec
Q 003103 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (847)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (847)
++++++.++++++++....++.+++.+++.| ..+.++..++..++++++++|||+||++++++++.+++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7899999999998755433222222222223 345678889999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeEEEEecCCCccccCceEEEEEeeeec-c---c--CC-------------------ChHHHHHHHHHhcc
Q 003103 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF-A---K--GV-------------------EKEHVILLAARASR 372 (847)
Q Consensus 318 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~---~--~~-------------------~~~~~l~~~~~~~~ 372 (847)
+++++|+||++|++|||||||||+|+|+|.+++.... . . +. ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999998764210 0 0 00 01244555555543
Q ss_pred cc--------CcchHHHHHHHhcCC--hHHHhccceEEEeecCCCCCcceEEEEEcC-CCcEEEEEcCcHHHHHHhcCC-
Q 003103 373 TE--------NQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC- 440 (847)
Q Consensus 373 ~~--------~~~~~~~ai~~~~~~--~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~- 440 (847)
.. .+||+|.|++.++.. ....+..++.++++||+|.+|||+++++.. ++++++++|||||.++.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 21 247999999988642 222344678899999999999999988753 567899999999999999963
Q ss_pred ----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC
Q 003103 441 ----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV 510 (847)
Q Consensus 441 ----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI 510 (847)
+++.++.+.+.+++++++|+|++++||+++ +.+|+|+|+++++||+|||++++|++||++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 134456778888999999999999999975 46799999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEE
Q 003103 511 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (847)
Q Consensus 511 ~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~m 590 (847)
+++|+|||++.||.++|+++||.... ...+.|.+ .+.++++++++.+++..||||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~-l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEK-LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHH-hHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997532 22344433 3467888999999999999999999999999999999999999
Q ss_pred EcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 003103 591 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI- 668 (847)
Q Consensus 591 iGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~- 668 (847)
+|||+||+|||++|||||||| +|+|+|+++||+++++|||++|++++++||++|+|+++++.|.++.|+..+..++.+
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 799999999999999999999999999999999999999999999999776655444
Q ss_pred HHhhcCCccHHHHHHHHHHhhhh-hcccccCCCCCC---CCCC----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 003103 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPD----SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTD 740 (847)
Q Consensus 669 ~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 740 (847)
++..+.|++|+|++|+|+++|++ ++++++|++++. ++|+ +...+.++..+++.|++++++.++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 44466799999999999999987 689999887653 2222 22235677788888999888877766654310
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---cchHHHHHHHHHHHHHHHHhhhccccccccc
Q 003103 741 FFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVRVHFHLTNLNTTIHM 817 (847)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (847)
+ ....+.+|+.|.+++++|++|.+++|+++.++++ ..|++++.++++..++ .++.+|.+.....|
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIG-QLLVIYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 0 0124567999999999999999999997755443 2456777777766665 44445544445678
Q ss_pred cccccChhhHHHHHHHHhh--hHHHHHHhhc
Q 003103 818 GSSFVSVHDFSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 818 ~~~~~~~~~~~~~l~i~~~--~f~~~~~~~~ 846 (847)
++.++++.+|.+++++++. .++|.+|++.
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888777665 4899999864
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.4e-125 Score=1159.90 Aligned_cols=816 Identities=21% Similarity=0.335 Sum_probs=661.0
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 003103 23 PIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANG------G 92 (847)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~------~ 92 (847)
..++++++|+++ .+||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 578899999998 56999 999999999999999998876 5678889999999999999999999987621 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccce
Q 003103 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (847)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~ 171 (847)
+...+|+++++++++++++.++++++|++++++.+++++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2334799999999999999999999999999999999764 478999999999999999999999999999999999999
Q ss_pred EEEeeCceEEEeccccCCCceeecCCCCc--cccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCCCchHHHHHHHH
Q 003103 172 RLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249 (847)
Q Consensus 172 ~ll~g~~~~Vdes~LTGEs~pv~K~~~~~--v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~ 249 (847)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|++||+.++++++++++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999789999999999999999998765 9999999999999999999999999999999887777789999999888
Q ss_pred HHHHHHHHHHHHHHHHh---hhhcc---c---------cchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCc
Q 003103 250 NFCICSIAVGIVAEIII---MYPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (847)
Q Consensus 250 ~~~~~~i~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (847)
+++...+++..++.+++ .+... + .++.+.+..++++++++|||+||++++++++.++.+|+|+|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 77543322211111111 11111 1 246677888999999999999999999999999999999999
Q ss_pred eeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc---cC----CC--hHHHHHHHHHhccc------------
Q 003103 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----VE--KEHVILLAARASRT------------ 373 (847)
Q Consensus 315 lvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~---~~----~~--~~~~l~~~~~~~~~------------ 373 (847)
++|+++++|+||++|++|||||||||+|+|++.+++..... .+ .+ ..+++..++.++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999987642110 00 00 12233333333211
Q ss_pred cCcchHHHHHHHhcC----ChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC--------
Q 003103 374 ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-------- 441 (847)
Q Consensus 374 ~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-------- 441 (847)
..+||+|.|++.++. +..+.+..++.++.+||+|++|||+++++..++++++++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125799999998763 33333455677889999999999999998766778999999999999999631
Q ss_pred --hHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC---CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEc
Q 003103 442 --EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516 (847)
Q Consensus 442 --~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~---~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miT 516 (847)
.+.++++.+.+++++++|+|++++||++++.++ .+..|++|+|+|+++++||+|+|++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 023567888899999999999999999886433 233478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcC
Q 003103 517 GDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 596 (847)
Q Consensus 517 GD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~N 596 (847)
|||+.||.++|+++||.++ +...+.|.+ ...++++++++++++..||||++|+||.++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~-~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKE-FRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHH-hhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999743 123444443 3467788999999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 003103 597 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKF 674 (847)
Q Consensus 597 D~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~-~~~~~~ 674 (847)
|+||||+|||||||| +|+|+|+++||++|++|+|++|++++++||++|+|+++++.|.+++|+..++..+++ +++.+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766655554 444667
Q ss_pred CccHHHHHHHHHHhhhh-hcccccCCCCCC---CCCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 003103 675 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (847)
Q Consensus 675 ~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (847)
|++|+|++|+|+++|.+ ++++++|++++. ++|++| ..+.++..++.+|++++++.++.|++... ++....
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~ 837 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVSG 837 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccC
Confidence 99999999999999975 799999887654 233332 23567777888899999888877665431 221000
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCC-Ccccc--chHHHHHHHHHHHHHHHHhhhccccccccccccccC
Q 003103 747 GVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSW-SFIER--PGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVS 823 (847)
Q Consensus 747 ~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~-~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (847)
+.........+.+|+.|.+++++|+++.+++|+.+. .+++. .|++++.++++..++. ++..++. ..+|++.+++
T Consensus 838 ~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~~~~--~~~f~~~~l~ 914 (941)
T TIGR01517 838 PDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQ-VIIVEFG--GSFFSTVSLS 914 (941)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHH-HHHHHHH--HHHhcccCCC
Confidence 000000123567899999999999999999999653 22211 2446666555554543 3333332 4468889999
Q ss_pred hhhHHHHHHHHhh--hHHHHHHhhc
Q 003103 824 VHDFSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 824 ~~~~~~~l~i~~~--~f~~~~~~~~ 846 (847)
+..|.++++++.. .+.|..|.+.
T Consensus 915 ~~~w~~~~~~~~~~~~~~~~~~~~~ 939 (941)
T TIGR01517 915 IEQWIGCVLLGMLSLIFGVLLRLIP 939 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998777665 5777776653
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-129 Score=1075.84 Aligned_cols=803 Identities=23% Similarity=0.362 Sum_probs=642.4
Q ss_pred HHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCccccch-HHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCCCCCch
Q 003103 24 IEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKESK-VLKFLGFMWNPLSWVMEAAAIMAIALAN-GGGRDPDW 98 (847)
Q Consensus 24 ~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~il~~~~~~-~~~~~~~~ 98 (847)
.+.++++|+++ .+||+. +|..+|++.||.|.+|+++++. |+..++.+.+.-.++|.++|++|+.+++ ..+....|
T Consensus 103 v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW 182 (1034)
T KOG0204|consen 103 VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGW 182 (1034)
T ss_pred HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCccc
Confidence 68899999998 569987 8999999999999999988655 5555899999999999999999999886 34556699
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC
Q 003103 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD 177 (847)
Q Consensus 99 ~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~-~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~ 177 (847)
++++.|++.+++..++....+|+.++..+.|.+ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|+
T Consensus 183 ~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn 262 (1034)
T KOG0204|consen 183 IEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGN 262 (1034)
T ss_pred ccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEecc
Confidence 999988766544444444444444444444432 3466889999999999999999999999999999999999999999
Q ss_pred ceEEEeccccCCCceeecCC--CCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHH--
Q 003103 178 PLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC-- 252 (847)
Q Consensus 178 ~~~Vdes~LTGEs~pv~K~~--~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~-- 252 (847)
++.+|||++||||++++|.+ ...+++||++.+|.++++|+++|.+|..|++..++.... +++|+|-.+++++..+
T Consensus 263 ~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk 342 (1034)
T KOG0204|consen 263 SLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGK 342 (1034)
T ss_pred ceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999987 457899999999999999999999999999999888775 8899998888776542
Q ss_pred -HHHHHHHHHHHHHhhhhcc-----cc---c--------hHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCce
Q 003103 253 -ICSIAVGIVAEIIIMYPVQ-----HR---K--------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (847)
Q Consensus 253 -~~~i~~~~~~~~~~~~~~~-----~~---~--------~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (847)
...++...++.++..|+.. +. . +...+..++.++++++|+|||++++++++++++||.+.+.+
T Consensus 343 ~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~L 422 (1034)
T KOG0204|consen 343 IGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNL 422 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhH
Confidence 1111121222222233221 11 1 11233344566778999999999999999999999999999
Q ss_pred eccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccC--------CChH--HHHHHH-HHhcc------------
Q 003103 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------VEKE--HVILLA-ARASR------------ 372 (847)
Q Consensus 316 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~--------~~~~--~~l~~~-~~~~~------------ 372 (847)
+|+++++|++|+.++||+|||||||+|+|+|.+.++....+. .++. +++..+ +..+.
T Consensus 423 VRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~ 502 (1034)
T KOG0204|consen 423 VRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQ 502 (1034)
T ss_pred HHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcC
Confidence 999999999999999999999999999999998765321111 1111 112111 11111
Q ss_pred -ccCcchHHHHHHHhc----CChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-------
Q 003103 373 -TENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------- 440 (847)
Q Consensus 373 -~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~------- 440 (847)
...++|.|.|++++. .+.++.+...+.++.+||+|.+|+|+++++.++|..++++|||+|.+++.|+.
T Consensus 503 ~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~ 582 (1034)
T KOG0204|consen 503 PEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGE 582 (1034)
T ss_pred ccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCC
Confidence 012489999999875 46667788888999999999999999999977776349999999999999974
Q ss_pred ----ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCC-------C-CCCCCCCceEEEEecccCCCCcchHHHHHHHHhC
Q 003103 441 ----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508 (847)
Q Consensus 441 ----~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 508 (847)
+++.++.+.+.++.|+.+|+|++++||++..+. + .+..+.+|+++|+++++||+|||++++|+.|++|
T Consensus 583 ~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~A 662 (1034)
T KOG0204|consen 583 LVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRA 662 (1034)
T ss_pred EeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHc
Confidence 345566889999999999999999999984322 1 2456789999999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEE
Q 003103 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHIC 588 (847)
Q Consensus 509 GI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V 588 (847)
||+|.|+||||..||++||.+|||.++..+...+.| .+...+++++++++..+.+|+||.+|.||.-+|+.|+++|++|
T Consensus 663 GItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG-~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VV 741 (1034)
T KOG0204|consen 663 GITVRMVTGDNINTAKAIARECGILTPGGDFLALEG-KEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVV 741 (1034)
T ss_pred CcEEEEEeCCcHHHHHHHHHHcccccCCCccceecc-hhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEE
Confidence 999999999999999999999999875443334444 4455889999999999999999999999999999999999999
Q ss_pred EEEcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 003103 589 GMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFM 666 (847)
Q Consensus 589 ~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~-~~~~~~~ 666 (847)
|++|||+||+||||+||||.||| .||++|||+||+||+||||++|++++.|||..|+||+|+++|+++.|+ ++++.+.
T Consensus 742 AVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv 821 (1034)
T KOG0204|consen 742 AVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFV 821 (1034)
T ss_pred EEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhh
Confidence 99999999999999999999999 999999999999999999999999999999999999999999999998 4555555
Q ss_pred HHHHhhcCCccHHHHHHHHHHhhhh-hcccccCCCCCC---C----CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003103 667 LIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRK 738 (847)
Q Consensus 667 ~~~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 738 (847)
.+......|+++.|+||+|+++|.+ +++|+.|++.+. + |..+...+.+|+.++.+++|+.++.|.+.+....
T Consensus 822 ~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~ 901 (1034)
T KOG0204|consen 822 SACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS 901 (1034)
T ss_pred hhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 5555666899999999999999987 799999998653 2 2344456789999999999999888866555431
Q ss_pred cccccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCC-CC----ccccchHHHHHHHHHHHHHHHHhhhccccc
Q 003103 739 TDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRS-WS----FIERPGLLLATAFVIAQLVRVHFHLTNLNT 813 (847)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 813 (847)
.|..+ + +.+..+.+..|+.|.+++++|.||-+++|+.. .. .++|+ ++.+++...++..++.+.+.+.
T Consensus 902 --if~~~-~--~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~g~ 973 (1034)
T KOG0204|consen 902 --IFGLN-G--PLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFGGA 973 (1034)
T ss_pred --hhccC-C--CCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhcCc
Confidence 22211 1 12223445569999999999999999999955 22 23343 3333333333334444444333
Q ss_pred cccccccccChhhHHHHHHHHhhh
Q 003103 814 TIHMGSSFVSVHDFSWYLFIETSS 837 (847)
Q Consensus 814 ~~~~~~~~~~~~~~~~~l~i~~~~ 837 (847)
. |.+.++++..|.+|+++++.+
T Consensus 974 ~--~st~~L~~~qWl~ci~~g~~s 995 (1034)
T KOG0204|consen 974 F--FSTTPLSLTQWLWCIFIGVLS 995 (1034)
T ss_pred c--eeeecccHHHHHHHHHHHHHH
Confidence 3 888999999999999999765
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=5.6e-117 Score=1079.65 Aligned_cols=778 Identities=27% Similarity=0.375 Sum_probs=626.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC
Q 003103 66 FLGFMWNPLSWVMEAAAIMAIALANGG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (847)
Q Consensus 66 ~~~~~~~~~~~~l~~~~il~~~~~~~~---~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd 142 (847)
+++||++|++++|+++++++++++... ....+|.++++|++++++++.++++||+|+++++++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986321 22358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC-------------Cccccceeeee
Q 003103 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (847)
Q Consensus 143 g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gt~v~~ 209 (847)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.++ |++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999875 78999999999
Q ss_pred ceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-c----cccch----HhHH
Q 003103 210 GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYP-V----QHRKY----RDGI 279 (847)
Q Consensus 210 G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~~~~~----~~~~ 279 (847)
|++.++|++||.+|++||+.+.++.++ +++++|+.+++++..+...+++.+++.+++... + .+.+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 999999999999999999999887764 689999999998877544333222222221111 0 11122 2344
Q ss_pred HHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeec-----
Q 003103 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (847)
Q Consensus 280 ~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~----- 354 (847)
..++++++++||++||++++++++.+++||+++|+++|+++++|+||++|++|||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 566788999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHhcccc------------CcchHHHHHHHhcCCh----H--
Q 003103 355 ------AKGVE-------------------KEHVILLAARASRTE------------NQDAIDAAIVGMLADP----K-- 391 (847)
Q Consensus 355 ------~~~~~-------------------~~~~l~~~~~~~~~~------------~~~~~~~ai~~~~~~~----~-- 391 (847)
..+++ .+.++..++.|+... .++|.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 123444555555321 2589999998764211 0
Q ss_pred --------------HHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-----------ChHHHH
Q 003103 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (847)
Q Consensus 392 --------------~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-----------~~~~~~ 446 (847)
..++.++.++.+||+|+||||++++++ ++++++++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123457789999999999999999875 467899999999999999963 234567
Q ss_pred HHHHHHHHHHH-ccCeEEEEEeeecCCCC----------CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 003103 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (847)
Q Consensus 447 ~~~~~~~~~~~-~G~rvl~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~mi 515 (847)
++.+.+++|++ +|+||+++|||.++.+. .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13468899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCC--CCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcC
Q 003103 516 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (847)
Q Consensus 516 TGD~~~tA~~iA~~~Gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGD 593 (847)
|||++.||.++|+++|+..+..+ ...+.|.+ .+.+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGRE-FDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHH-HhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999643211 11233333 3456677788888888999999999999999999999999999999
Q ss_pred CcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 003103 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIW 672 (847)
Q Consensus 594 G~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~-~~~ 672 (847)
|+||+||||+||||||||+|+++|+++||+++.+|||++|++++++||++|+|+++++.|.++.|+..++..+++. +.+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777666654 345
Q ss_pred cCCccHHHHHHHHHHhhhh-hcccccCCCCCC---CCC----CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 003103 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQP----DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFS 743 (847)
Q Consensus 673 ~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 743 (847)
+.|++|+|++|+|+++|.+ ++++++++++++ .+| ++...++++..+++.|+++++++++.|++.... ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999964 788988887653 122 122235677777888999998877666554321 2211
Q ss_pred ccc----cccc---c----CCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---cchHHHHHHHHHHHHHHHHhhhc
Q 003103 744 DAF----GVRS---L----RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVRVHFHLT 809 (847)
Q Consensus 744 ~~~----~~~~---~----~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 809 (847)
... +..+ . .....+++|+.|.+++++|++|.|++|+++.++++ .+|++++.+++++.++ +++..|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l-~~~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMAL-HFLILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHH-HHHHHH
Confidence 000 0000 0 00234578999999999999999999997755433 2355777777766555 444445
Q ss_pred cccccccccccccChhhHHHHHHHHhh--hHHHHHHhhc
Q 003103 810 NLNTTIHMGSSFVSVHDFSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~l~i~~~--~f~~~~~~~~ 846 (847)
.+....+|++.++++.+|.+++++.+. .++|.+|++.
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544556789999999999988777655 4899999874
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.2e-116 Score=1087.91 Aligned_cols=781 Identities=21% Similarity=0.251 Sum_probs=616.2
Q ss_pred CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 003103 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (847)
Q Consensus 35 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 114 (847)
.+|||++|+++|+++||+|+++.+++++|+.|++++++||+++++++++++++. .+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998888889999999999988887776665542 3788999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEc--CCCeeccceEEEeeCceEEEeccccCCCce
Q 003103 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (847)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~--~G~~vPaD~~ll~g~~~~Vdes~LTGEs~p 192 (847)
++++++|+.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888654 568999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------Cccccceeeee-------ceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHH
Q 003103 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLT 246 (847)
Q Consensus 193 v~K~~~------------------~~v~~Gt~v~~-------G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~ 246 (847)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+.+..++ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 789999999999999999999887654 5577888777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcC
Q 003103 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (847)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg 326 (847)
++..+++++.++++++ +++.....+.++...+..++.++++++|++||++++++++.|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7665543332222222 111222345678889999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCCccccCceEEEEEeeeecccC----------CChHHHHHHHHHhccc------cCcchHHHHHHHhcCCh
Q 003103 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASRT------ENQDAIDAAIVGMLADP 390 (847)
Q Consensus 327 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~~------~~~~~~~~ai~~~~~~~ 390 (847)
++|++|||||||||+|+|+|.++........ .....+....+.|+.. ..+||+|.|++++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211000 0112233334444321 23699999999875311
Q ss_pred ----HH--H-------------hccceEEEeecCCCCCcceEEEEEcCC-CcEEEEEcCcHHHHHHhcCCChHHHHHHHH
Q 003103 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (847)
Q Consensus 391 ----~~--~-------------~~~~~~~~~~pf~s~~k~~~v~~~~~~-g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~ 450 (847)
.+ . ...+++++.+||+|++|||+++++..+ +++++++|||||.|+++|+. ++.++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 145778899999999999999998643 56789999999999999984 345778899
Q ss_pred HHHHHHHccCeEEEEEeeecCCC--------CCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 003103 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (847)
Q Consensus 451 ~~~~~~~~G~rvl~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 522 (847)
.+++++++|+||+++|||++++. ++++.|+||+|+|+++|+||+|||++++|++||++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998632 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC-------------CC--------------------------------------cccCcccc--c
Q 003103 523 GKETGRRLGMGTNMYP-------------SS--------------------------------------SLLGQDKD--A 549 (847)
Q Consensus 523 A~~iA~~~Gi~~~~~~-------------~~--------------------------------------~~~~~~~~--~ 549 (847)
|.++|+++||.++... .. .++|...+ .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 00 00111100 0
Q ss_pred cCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 550 ~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
.++++++++++.++.||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||||++ |++ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1234567778889999999999999999999999999999999999999999999999999964 544 79999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhh-hcccccCCCCCC---CC
Q 003103 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQ 705 (847)
Q Consensus 630 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~ 705 (847)
|++|+++|++||+++.|+++.+.|.+.+++..+..++. ....+.+++++|++|+|++++.+ +++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999998866554433 33456899999999999999976 788888887653 22
Q ss_pred C-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-cCCChhHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 003103 706 P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 783 (847)
Q Consensus 706 ~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~ 783 (847)
| .+...+..+...+.+++++.++.+..|++....+|+........ -.......+|+.| .++.++++..+.+++.+.+
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 3 33334566777778888888888887777766666532111100 0112234568888 6677888888888887654
Q ss_pred cccc--chHHHHHHHHHHHHHHHHhhh-ccccccccccccccChhhHHHHH
Q 003103 784 FIER--PGLLLATAFVIAQLVRVHFHL-TNLNTTIHMGSSFVSVHDFSWYL 831 (847)
Q Consensus 784 ~~~~--~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 831 (847)
+... .|.+++.++++..++..++.+ +.+.....|++.+++. .|.+.+
T Consensus 1002 f~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~l 1051 (1054)
T TIGR01657 1002 FREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-EFRSKL 1051 (1054)
T ss_pred hhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-HHHHHH
Confidence 4332 344666666655454443333 5555555677777775 354443
No 15
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-119 Score=995.89 Aligned_cols=840 Identities=24% Similarity=0.393 Sum_probs=690.6
Q ss_pred CCcccchhhhccc-CcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHH
Q 003103 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVME 79 (847)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~ 79 (847)
.+|.+++++.|++ ..+.|++|.+|+.++++++ .+|||.+++.+++.+.|+|.+++|+ .+.|.+|++|+++.+.++++
T Consensus 22 ~~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 22 KKKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred cchhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 4567788888888 5889999999999999999 7899999999999999999998877 45699999999999999999
Q ss_pred HHHHHHHHHhc---C---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCC
Q 003103 80 AAAIMAIALAN---G---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 153 (847)
Q Consensus 80 ~~~il~~~~~~---~---~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~L 153 (847)
++++++++... . .....+.+-+.++..++++..+..++||.+..+.+++++++.|+.++|+|||+...+..+||
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eel 181 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEEL 181 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhc
Confidence 99999988432 1 11123445555566677888889999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC----------CccccceeeeeceEEEEEEeccchh
Q 003103 154 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHT 223 (847)
Q Consensus 154 v~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T 223 (847)
||||+|.++-||+||||.+++++..++||+|+|||||+|..+.+. |+.|.+|.+++|.++++|++||.+|
T Consensus 182 VvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~T 261 (1019)
T KOG0203|consen 182 VVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRT 261 (1019)
T ss_pred ccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCce
Confidence 999999999999999999999999999999999999999998763 6789999999999999999999999
Q ss_pred HhhhHHHhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHH
Q 003103 224 FFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (847)
Q Consensus 224 ~~g~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~ 302 (847)
.+|+|+.+... ...++++++.++.+..+......+ +.+.++......+..|..++.+.+.++++.+|+||+..++.++
T Consensus 262 v~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~L 340 (1019)
T KOG0203|consen 262 VMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCL 340 (1019)
T ss_pred EEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhH
Confidence 99999988765 357788888888877664322222 2222222333347788888888999999999999999999999
Q ss_pred HHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeeccc----------------CCChHHHHHH
Q 003103 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----------------GVEKEHVILL 366 (847)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~----------------~~~~~~~l~~ 366 (847)
...++||+++++++|+++++|+||+.++||+|||||||+|+|+|.+.+.+..-. ...-.++.++
T Consensus 341 tltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~ 420 (1019)
T KOG0203|consen 341 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRI 420 (1019)
T ss_pred HHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999877531100 1112345666
Q ss_pred HHHhccc---------------cCcchHHHHHHHhc----CChHHHhccceEEEeecCCCCCcceEEEEEcCC---CcEE
Q 003103 367 AARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWH 424 (847)
Q Consensus 367 ~~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~---g~~~ 424 (847)
+..|++. ..+|+.+.|++++. .+..+.++..+.+.++||+|.+|+.-.++...+ .++.
T Consensus 421 ~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~ 500 (1019)
T KOG0203|consen 421 ATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFL 500 (1019)
T ss_pred HHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccce
Confidence 6666542 23588999999885 345667888889999999999999988887544 5778
Q ss_pred EEEcCcHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC-----------CCCCCCce
Q 003103 425 RASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQ 483 (847)
Q Consensus 425 ~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~-----------~~~e~~l~ 483 (847)
+.+|||||.++++|+. ++...+.+++...++...|-||++++++.+++++. +....+|.
T Consensus 501 l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~ 580 (1019)
T KOG0203|consen 501 LVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLR 580 (1019)
T ss_pred eeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcc
Confidence 8999999999999973 45677888999999999999999999999875431 23456799
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC------------CC----------Cc
Q 003103 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY------------PS----------SS 541 (847)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~------------~~----------~~ 541 (847)
|+|++++.||||..+|+++..||.|||||+|+||||+.||+++|+++||..... +. .+
T Consensus 581 FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 581 FLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred ccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 999999999999999999999999999999999999999999999999754211 00 01
Q ss_pred ccCccccccCCcchHHHHHHhcC--eEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHh
Q 003103 542 LLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAAR 618 (847)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~ 618 (847)
+.|. +...++.+++++++++.. ||||.||+||+.||+.+|++|.+|+++|||+||+||||+|||||||| .|+|++|
T Consensus 661 ihG~-eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsK 739 (1019)
T KOG0203|consen 661 IHGS-ELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 739 (1019)
T ss_pred Eecc-cccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHH
Confidence 2222 334678889999998765 99999999999999999999999999999999999999999999999 9999999
Q ss_pred hccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCccHHHHHHHHHHhhhh-hcccc
Q 003103 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTIS 696 (847)
Q Consensus 619 ~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~l~ 696 (847)
+|||+||+||||++|+..+++||-+|+|+||.+.|.+++|++.+..++.+ ++..|+|+.++++|.+.+.+|++ +++|+
T Consensus 740 qAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLA 819 (1019)
T KOG0203|consen 740 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLA 819 (1019)
T ss_pred hhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHh
Confidence 99999999999999999999999999999999999999999877766555 45688999999999999999985 89999
Q ss_pred cCCCCCC---CCC-----CcccHHHHHHHHH-HHHHHHHHHHHHHHHHHH-hccccccc-cc---------ccccCCC--
Q 003103 697 KDRVKPS---PQP-----DSWKLKEIFATGV-VLGSYLAIMTVVFFWLMR-KTDFFSDA-FG---------VRSLRTR-- 754 (847)
Q Consensus 697 ~~~~~~~---~~~-----~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~-~~~~~~~~-~~---------~~~~~~~-- 754 (847)
||.++.. ++| ++....+++.++. ..|+++++..|+.|++.+ ..+|+|.. .+ +.+++++
T Consensus 820 YE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyG 899 (1019)
T KOG0203|consen 820 YEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYG 899 (1019)
T ss_pred ccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhcc
Confidence 9987643 122 2233456666654 559999999997665554 45666632 11 1122222
Q ss_pred -----------hhHHHHHHHHHHHHHHHHHhhhhccCCCCccc--cchHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 003103 755 -----------PDEMMAALYLQVSIISQALIFVTRSRSWSFIE--RPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSF 821 (847)
Q Consensus 755 -----------~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (847)
+.+++|.+|+++++.|.+.++++.+++.+.+. ..|+.++++++.-.++.+++++ .++....+++.+
T Consensus 900 QeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y-~pg~~~~l~~~p 978 (1019)
T KOG0203|consen 900 QEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCY-CPGVLYALGMYP 978 (1019)
T ss_pred ccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhc-CccHHHHhccCC
Confidence 12357889999999999999999998866544 4688999999888777666654 444555677788
Q ss_pred cChhhHHH--HHHHHhhhHHHHHHhh
Q 003103 822 VSVHDFSW--YLFIETSSLSEMMHLF 845 (847)
Q Consensus 822 ~~~~~~~~--~l~i~~~~f~~~~~~~ 845 (847)
+.+.+|.. -..+....|||-||.+
T Consensus 979 l~~~~wl~a~P~~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 979 LKFQWWLVAFPFGILIFVYDEVRKLF 1004 (1019)
T ss_pred CCcEEEEecccceeeeeeHHHHHhHh
Confidence 88865533 3344556699999875
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.5e-97 Score=923.29 Aligned_cols=712 Identities=18% Similarity=0.233 Sum_probs=536.8
Q ss_pred cCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (847)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~ 125 (847)
|..|.+...|++.| +.+++||.+|++++|+++++++++...... ..+...++++++++++.+.+.+++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 778999999999999999999988543221 123344455666678888999999999888
Q ss_pred HHHHhhcCCCeEEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCc----eEEEeccccCCCceeecCCC--
Q 003103 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-- 198 (847)
Q Consensus 126 ~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~~-- 198 (847)
.++ .++++++|+|| |++++++++||+|||+|.|++||+||||++++++++ +.||||+|||||+|+.|.+.
T Consensus 79 d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 754 35689999997 899999999999999999999999999999998544 89999999999999998641
Q ss_pred ----------------------------------------------Cccccceeeee-ceEEEEEEeccchhHhhhHHHh
Q 003103 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (847)
Q Consensus 199 ----------------------------------------------~~v~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~~ 231 (847)
|.+++||.+.+ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 45789999998 89999999999999887632
Q ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc----cch---------------HhHHHHHHHHHHHhhcC
Q 003103 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (847)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~ll~~~iP~ 292 (847)
.....+.+++++.++++..+++++.++.+++..++...+.. ..| ...+..++.++..++|+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 22234678999999999877554433323332222111111 011 12566788899999999
Q ss_pred chhHHHHHHHHHHH------HHhhcC----CceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccC-----
Q 003103 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----- 357 (847)
Q Consensus 293 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----- 357 (847)
+||+.+++++..++ .+|.++ ++.+|+.+++|+||+|++||+|||||||+|+|+++++.+....++
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 788864 599999999999999999999999999999999999865311000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccc-------c-------CcchH
Q 003103 358 --------V--------------------E----------------KEHVILLAARASRT-------E-------NQDAI 379 (847)
Q Consensus 358 --------~--------------------~----------------~~~~l~~~~~~~~~-------~-------~~~~~ 379 (847)
. + ..+.+..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01233444445421 1 25899
Q ss_pred HHHHHHhcCCh---------H---------HHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-
Q 003103 380 DAAIVGMLADP---------K---------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (847)
Q Consensus 380 ~~ai~~~~~~~---------~---------~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~- 440 (847)
|.|+++++... . .....++.++.+||+|+||||++++++++|++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999875321 0 0124578889999999999999999988888899999999999999984
Q ss_pred ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC-------------------------CCCCCCCceEEEEecccCCCC
Q 003103 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPR 495 (847)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr 495 (847)
+++.++++.+.+++++++|+||+++|+|.+++++ .+.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 3456778899999999999999999999987532 134689999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCC-----------------------------------
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~----------------------------------- 540 (847)
+|++++|+.||+|||++||+|||+++||.++|++||+.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975321100
Q ss_pred ----cccCccccccCCc---chHHHHHHhcC--eEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCChhhhhhcCcceec
Q 003103 541 ----SLLGQDKDASIAA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 541 ----~~~~~~~~~~~~~---~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.+.|...+..+++ +++.+++.+++ ||||++|+||.++|+.+|+. |++|+|+|||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1112111111111 12334555555 99999999999999999998 99999999999999999999999988
Q ss_pred -ccccHHHhhccCEEEcCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CccHHHHHHH
Q 003103 611 -ADATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF----DFSPFMVLII 684 (847)
Q Consensus 611 -g~g~~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~----~~~~~~~l~~ 684 (847)
|.....|+.+||+++. +|+.+.+++ .+||++|+|+++++.|.++.|+..++..+++.++..+ ++.+++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 4222257789999996 499999998 7799999999999999999999887777776655332 5788999999
Q ss_pred HHHhhhh-hccccc-CCCCCC----CCC--------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 003103 685 AILNDGT-IMTISK-DRVKPS----PQP--------DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS 750 (847)
Q Consensus 685 ~l~~~~~-~~~l~~-~~~~~~----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (847)
|++++.+ +++++. |+..++ ..| ++....+.+..+++.|++++++.+++.++.+....... .|.
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~-~g~-- 948 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVS-SGS-- 948 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc-CCc--
Confidence 9999875 677754 332111 111 11222344555667899999888765444442211111 110
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHh
Q 003103 751 LRTRPDEMMAALYLQVSIISQALI 774 (847)
Q Consensus 751 ~~~~~~~~~t~~f~~~~~~~~~~~ 774 (847)
..+.....+..|..+++...+.+
T Consensus 949 -~~~~~~~~~~~~~~~~~~~~~~~ 971 (1057)
T TIGR01652 949 -LDDFSSVGVIVFTALVVIVNLKI 971 (1057)
T ss_pred -ccchhhHHHHHHHHHHHHHHHHH
Confidence 01223445666666665555543
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.1e-97 Score=858.22 Aligned_cols=546 Identities=22% Similarity=0.341 Sum_probs=450.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC-C--C-CCCchhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-eEE
Q 003103 68 GFMWNPLSWVMEAAAIMAIALANG-G--G-RDPDWQDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK 138 (847)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~-~--~-~~~~~~~~~~i~~~i~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 138 (847)
.+++||+.|+++++++++++++.. . + ....+++++.|.++++++..++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 468999999999999999987631 1 0 0011245666777777777777776 78999999999998886 776
Q ss_pred -EEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC---CccccceeeeeceEEE
Q 003103 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (847)
Q Consensus 139 -V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~ 214 (847)
|.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 77999999999999999999999999999999999999 569999999999999999999 8899999999999999
Q ss_pred EEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCc
Q 003103 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (847)
Q Consensus 215 ~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~ 293 (847)
+|+++|.+|++||+.+++++++ +++++|.....+...+.+. ++ +++.++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii-~l-~~~~~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTII-FL-VVILTMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHH-HH-HHHHHHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998875 6788886655543322211 11 111111111 111234446677788888999999
Q ss_pred hhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccc
Q 003103 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (847)
Q Consensus 294 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~ 373 (847)
||..++++.+.|+.||+|+|+++|+++++|++|++|++|||||||||+|++.+.++.. ..+.+.++++..++.++..
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIA 340 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998877766432 2234556677777777655
Q ss_pred cCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC-hHHHHHHHHHH
Q 003103 374 ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVI 452 (847)
Q Consensus 374 ~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~ 452 (847)
+ .||++.|++.++..... .......+++||++++|+|++.+ +|+ .+.||+||.++++|+.. ...+..+++..
T Consensus 341 s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 341 D-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred C-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 4 49999999987642110 00011235689999999999864 243 45699999999999742 12234466777
Q ss_pred HHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003103 453 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (847)
Q Consensus 453 ~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi 532 (847)
++++++|+|+++++. |++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 414 ~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 889999999998864 3489999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
. ++|||++||||.++|+.+|++|++|+|+|||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 4 2799999999999999999999999999999999999999999999999
Q ss_pred ccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 670 (847)
Q Consensus 613 g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 670 (847)
|+|+||++||+||+||||++|++++++||++|.|+++++.|.++.|++..+..+.+.|
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999977665555444
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-96 Score=825.07 Aligned_cols=744 Identities=22% Similarity=0.325 Sum_probs=554.4
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 003103 26 EVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGII 105 (847)
Q Consensus 26 ~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~ 105 (847)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..||| +++.+.+++.|.. +.+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~------d~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLA------DSYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhc------ccchhhhhHHH
Confidence 4444555557899999999999999999999999999999999999999 5555555544443 23556666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcC-CCeeccceEEEeeCceEEEec
Q 003103 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQS 184 (847)
Q Consensus 106 ~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~-G~~vPaD~~ll~g~~~~Vdes 184 (847)
++.+.+..++.+++++..+.++++-+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 78888888899999999888877654 5578999999999999999999999999988 9999999999999 6899999
Q ss_pred cccCCCceeecCCC-------------------Cccccceeeee------ceEEEEEEeccchhHhhhHHHhhhccCCCC
Q 003103 185 ALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (847)
Q Consensus 185 ~LTGEs~pv~K~~~-------------------~~v~~Gt~v~~------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 239 (847)
+|||||+|+.|.+. +.+|+||.+++ |.+.++|++||.+|..|++.+.+-.++..
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~- 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV- 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc-
Confidence 99999999999874 36899999986 55899999999999999998877766532
Q ss_pred chHHHHHHHHHH--HHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceec
Q 003103 240 HFQKVLTAIGNF--CICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (847)
Q Consensus 240 ~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (847)
+++-.-+.+..+ +.++..++.+. .++.+...+.+....+.+++.++...+|+|||+++++...++.+||.|+||+|-
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy-~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIY-TAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 233333333222 22222222222 122233457788899999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc---c--------------------C-CCh-HHHHHHHHHhcc
Q 003103 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---K--------------------G-VEK-EHVILLAARASR 372 (847)
Q Consensus 318 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~---~--------------------~-~~~-~~~l~~~~~~~~ 372 (847)
+++.+...|++|++|||||||||++.+.+..+....-+ . + ..+ ..+....+.|+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999998766541100 0 0 001 122333333332
Q ss_pred c------cCcchHHHHHHHhcC------------------------ChHH--------Hh-ccceEEEeecCCCCCcceE
Q 003103 373 T------ENQDAIDAAIVGMLA------------------------DPKE--------AR-AGVREVHFLPFNPVDKRTA 413 (847)
Q Consensus 373 ~------~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~~~~~pf~s~~k~~~ 413 (847)
. -.+||+|..+.+.-+ +|.+ .. ..+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 1 124676654433210 0100 01 1467889999999999999
Q ss_pred EEEEcC-CCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCC--------CCCCCCCCceE
Q 003103 414 LTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQL 484 (847)
Q Consensus 414 v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~--------~~~~~e~~l~~ 484 (847)
|++.++ +.+.++|+|||||.|.++|+. +.+++.+++.++.|+.+|+|++|+|+|+++.. +++..|++|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999865 467899999999999999984 67889999999999999999999999999865 36788999999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC---------CCC---------------
Q 003103 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---------PSS--------------- 540 (847)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~---------~~~--------------- 540 (847)
+|++.||+++|++++++|++|++|+||++|+||||..||..+||+||+..... ++.
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 99999999999999999999999999999999999999999999999964210 000
Q ss_pred cccCc-cc-------c------------ccC-----------CcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEE
Q 003103 541 SLLGQ-DK-------D------------ASI-----------AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICG 589 (847)
Q Consensus 541 ~~~~~-~~-------~------------~~~-----------~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~ 589 (847)
...+. +. . -.+ ..+.+++++.+..|||||+|+||.++|+.||+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 00000 00 0 001 12346667788999999999999999999999999999
Q ss_pred EEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 590 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669 (847)
Q Consensus 590 miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 669 (847)
|||||+|||.|||+|||||+++++. |.-||.+.-.-.+.+++++.|++||+.+-.--..+.|...+.+..++..+ .+
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~-~L 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV-FL 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh-ee
Confidence 9999999999999999999999643 45577887777899999999999999876666666666555543332221 11
Q ss_pred HhhcCCccHHHHHHHHHHhhhh-hcccc----cCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 003103 670 LIWKFDFSPFMVLIIAILNDGT-IMTIS----KDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (847)
Q Consensus 670 ~~~~~~~~~~~~l~~~l~~~~~-~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (847)
...+..++.+|.+++.++-..+ +..++ +++..+.|+|.+...++.+.-.+.+-+++.+.-+..+++....+|+..
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~p 1013 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEP 1013 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccceec
Confidence 2234578889999999887654 44443 334444555555554555554444455555555555666666677642
Q ss_pred c-ccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCcccc
Q 003103 745 A-FGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787 (847)
Q Consensus 745 ~-~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~ 787 (847)
. .+. .++......|..|+ ++.+|++.+....|.+.+++++
T Consensus 1014 p~~~~--~~nt~s~~~T~lF~-vS~fqYi~~a~v~S~g~pfr~p 1054 (1140)
T KOG0208|consen 1014 PNPQV--DDNTQSSDNTSLFF-VSSFQYIFIALVLSKGSPFRRP 1054 (1140)
T ss_pred CCCCc--CcccccceeeEeee-hhHHHHHHhheeeccCCcccCc
Confidence 1 111 11122233455554 4667777766667776555443
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.4e-94 Score=832.73 Aligned_cols=536 Identities=24% Similarity=0.321 Sum_probs=450.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----CC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEE
Q 003103 68 GFMWNPLSWVMEAAAIMAIALANGG----GR---DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKV 139 (847)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~~----~~---~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 139 (847)
.||+||+.++++++++++++++... +. ...|...+.+++.+++...++.++|+|+++.+++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4899999999999999999876311 11 12344445555666777778889999999999999998875 7999
Q ss_pred EECCe-EEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCc---cccceeeeeceEEEE
Q 003103 140 LRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 215 (847)
Q Consensus 140 ~rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~~~ 215 (847)
+|||+ +++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++|+. +|+||.|.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 89999999999999999999999999999999 58999999999999999999988 999999999999999
Q ss_pred EEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCch
Q 003103 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (847)
Q Consensus 216 V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L 294 (847)
|+++|.+|.+||+.+++++++ ++++++...+.+...+...+++.++..+.+.+ +.+.. .++..++++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~-~~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA-YSGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhCch--HHHHHHHHHHHHcccchh
Confidence 999999999999999998875 67888887776654433222221221111112 12222 367888999999999999
Q ss_pred hHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcccc
Q 003103 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (847)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (847)
+..++.+...|+.||+|+|+++|+++++|++|++|++|||||||||+|+|.+.++.. ..+.+.++++..++.++..+
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988753 23456677788777777665
Q ss_pred CcchHHHHHHHhcCCh---HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC-hHHHHHHHH
Q 003103 375 NQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHA 450 (847)
Q Consensus 375 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~ 450 (847)
. ||.+.+++.++... ......++..+++||++.++++++.+ +| ..+.||++|.+++.|+.. .+.++++++
T Consensus 342 ~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 E-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred C-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 5 89999998876431 11111244567899999988887643 34 578999999999999532 234567788
Q ss_pred HHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003103 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (847)
Q Consensus 451 ~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~ 530 (847)
.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 889999999999999974 3899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 531 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
||++ +|||++||||.++|+.+|++|++|+|+|||+||+|||++|||||||
T Consensus 483 GId~------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVDD------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCcE------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 9942 7999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (847)
Q Consensus 611 g~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~ 659 (847)
|+|+|+||++||+|++||||++|++++++||++.-.--....|++..-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998444445666665444
No 20
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=7.8e-91 Score=853.15 Aligned_cols=680 Identities=16% Similarity=0.163 Sum_probs=511.8
Q ss_pred hhcCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (847)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~ 123 (847)
.+|..|.+.+.|++.| +.+++||..+.+++|++.++++++..... ...+...+.+++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688999999999875 67789999999999999999998754322 12445566777788888888888888888
Q ss_pred HHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC----ceEEEeccccCCCceeecCCC-
Q 003103 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (847)
Q Consensus 124 ~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~~- 198 (847)
++.++. ++..++|+|+|+++++++++|+|||+|.|++||+||||+++++++ .++||||+|||||+|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 876553 567899999999999999999999999999999999999999843 489999999999999999753
Q ss_pred --------------------------------------------Cccccceeeeec-eEEEEEEeccchhHhhhHHHhhh
Q 003103 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (847)
Q Consensus 199 --------------------------------------------~~v~~Gt~v~~G-~~~~~V~~tG~~T~~g~i~~~~~ 233 (847)
|.+++||.+.+. .+.|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 234556666655 49999999999998432 2222
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh--hhhccc-c------------------------ch----HhHHHHH
Q 003103 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQH-R------------------------KY----RDGIDNL 282 (847)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~-~------------------------~~----~~~~~~~ 282 (847)
...+.+++++.++++..+++++.++.+++..++ .|.... . .+ ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 224778999999998876544433322222222 111100 0 00 1112233
Q ss_pred HHHHHHhhcCchhHHHHHHHHHHHHHhhcCC----------ceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeee
Q 003103 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (847)
Q Consensus 283 ~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 352 (847)
+.++..+||++|++.+++++...+..+.++. +.+|+.+..|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 4566689999999999999987777776654 789999999999999999999999999999999998752
Q ss_pred ecccC-----------------------------------------CC-h-----HHHHHHHHHhccc-----c------
Q 003103 353 VFAKG-----------------------------------------VE-K-----EHVILLAARASRT-----E------ 374 (847)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~~~~~~~~~-----~------ 374 (847)
...++ .+ + .+.+...+.|+.. +
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 00 0 1234444555422 0
Q ss_pred -------CcchHHHHHHHhcCCh----------------HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcH
Q 003103 375 -------NQDAIDAAIVGMLADP----------------KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (847)
Q Consensus 375 -------~~~~~~~ai~~~~~~~----------------~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~ 431 (847)
..+|.|.|++.++.+. ...+..++.++.+||+|+||||++++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 1268999999876321 22356788999999999999999999988888999999999
Q ss_pred HHHHHhcCCC--hHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC-------------------------CCCCCCceE
Q 003103 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (847)
Q Consensus 432 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~-------------------------~~~e~~l~~ 484 (847)
|.|+++|+.. .+.++++.+.+++|+++|+|||++|||.+++++. +.+|+||++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3567788899999999999999999999875321 346899999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcc----------------------
Q 003103 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL---------------------- 542 (847)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~---------------------- 542 (847)
+|+++++|+||++++++|++|+++||++||+|||+++||.+||++|||.++....-.+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999996542110000
Q ss_pred -------------------------cCccccccCC---cchHHHHHHhcC--eEEEeChhhHHHHHHHHhhc-CCEEEEE
Q 003103 543 -------------------------LGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (847)
Q Consensus 543 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~-g~~V~mi 591 (847)
.|......++ .+.+.++..++. ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 0000000001 123445555665 79999999999999999998 5899999
Q ss_pred cCCcCChhhhhhcCcceec-c-cccHHHhhccCEEEcCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 592 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668 (847)
Q Consensus 592 GDG~ND~~aLk~AdVGIam-g-~g~~~a~~aaDivl~~~~~~~i~~~i~-~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (847)
|||+||+||||+|||||++ | +|.+ |..+||+.+ ..|..+.+++. +||+.|+|+.+.+.|.+++|+.+.+..+++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~q-A~~aSDfaI--~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQ-AVMASDFAM--GQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHH-HHHhhccch--hhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 5 5555 555999999 56888888875 699999999999999999999988888888
Q ss_pred HHhhcCC----ccHHHHHHHHHHhh-hhhccc-ccCCCCCC----CCC--------CcccHHHHHHHHHHHHHHHHHHHH
Q 003103 669 ALIWKFD----FSPFMVLIIAILND-GTIMTI-SKDRVKPS----PQP--------DSWKLKEIFATGVVLGSYLAIMTV 730 (847)
Q Consensus 669 ~~~~~~~----~~~~~~l~~~l~~~-~~~~~l-~~~~~~~~----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~ 730 (847)
.++.+|. +.++.+.+.|++.. ++.+.+ .+|+.-+. ..| ++....+.+..+++.|++++++.|
T Consensus 955 ~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 955 VLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHH
Confidence 8777663 45666777776655 455555 34443221 011 111223455556777999998888
Q ss_pred HHHHHHH
Q 003103 731 VFFWLMR 737 (847)
Q Consensus 731 ~~~~~~~ 737 (847)
++.++.+
T Consensus 1035 f~~~~~~ 1041 (1178)
T PLN03190 1035 FVPLFAY 1041 (1178)
T ss_pred HHHHHHh
Confidence 6555444
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.2e-89 Score=791.54 Aligned_cols=538 Identities=22% Similarity=0.320 Sum_probs=450.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC----C--CCCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eE
Q 003103 68 GFMWNPLSWVMEAAAIMAIALANG----G--GRDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (847)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~----~--~~~~~~~~~---~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 137 (847)
.||.||+.++++++++++++++.. . +....|++. +.+++.+++..+++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 478999999999999999997531 1 111236654 3344456777888889999999999999998876 48
Q ss_pred EEEE-CCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCc---cccceeeeeceEE
Q 003103 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (847)
Q Consensus 138 ~V~r-dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~ 213 (847)
+|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+. +|+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 68999999999999999999975 8999999999999
Q ss_pred EEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcC
Q 003103 214 AVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (847)
Q Consensus 214 ~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 292 (847)
++|+++|.+|.+||+.+++++++ +++|+|...+.+..++.+++++..+. +..+.... .....+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 99999999999999999998875 67899987777665433222221111 11111111 1223567778999999999
Q ss_pred chhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 003103 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (847)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (847)
+++...+.....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 88877777777899999999999999999999999999999999999999999988753 234566778888877776
Q ss_pred ccCcchHHHHHHHhcCChHH--HhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC-hHHHHHHH
Q 003103 373 TENQDAIDAAIVGMLADPKE--ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (847)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~ 449 (847)
.++ ||.+.+++.++.+... ....++..+..||++.++++++.+. +| ..+.||+||.+++.|+.. ...+++++
T Consensus 341 ~s~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 ADD-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CCC-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 654 8999999887642111 0112344678999999877765443 45 468999999999888532 23345678
Q ss_pred HHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 003103 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (847)
Q Consensus 450 ~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~ 529 (847)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++|++++|+||||+.+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999853 89999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee
Q 003103 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 530 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
+|+.+ ++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~~------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVDD------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCCE------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 99942 699999999999999999999999999999999999999999999
Q ss_pred cccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (847)
Q Consensus 610 mg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~ 660 (847)
|++|+++|+++||++++||||++|++++++||+++-+......|+++.+++
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999999999999999999999998887764
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-87 Score=773.53 Aligned_cols=508 Identities=28% Similarity=0.386 Sum_probs=440.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE-CCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~ 175 (847)
+|.+++.+++++.+...++.+...|+++++++|.++.|+++++++ ||++++||.++|+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 336777788889999999999999999999999999999998877 5559999999999999999999999999999999
Q ss_pred eCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHH
Q 003103 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (847)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (847)
| ...||||++||||.|+.|.+||.|++||.+.+|..+..|+++|.+|.+++|.+++++++ ++++.|+..|+++.++..
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 46899999999999999999999999999999999999999999999999999999886 788999999999998877
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEec
Q 003103 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (847)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~D 334 (847)
.+++..++.++++++..+.+|..++..++++++++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 55444444444444444468889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEE
Q 003103 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (847)
Q Consensus 335 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v 414 (847)
||||||+|+|+|.++.. . .+ ++++++.+++..+..++ ||+..|+++++.+.. ....+..+.+|-. .-.+
T Consensus 412 KTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G~---Gv~~- 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPGR---GVEA- 480 (713)
T ss_pred CCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeeccC---cEEE-
Confidence 99999999999998763 2 23 77889999988877776 999999999664322 1122223333311 1111
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCC
Q 003103 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (847)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (847)
..+| ..+..|+++.+.+.-. +... ..+..+.+.++|..++.++.+. +++|+++++|++
T Consensus 481 ---~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 ---EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred ---EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1245 4566799998765221 1111 4556678888999888888865 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhH
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 574 (847)
|||++++|++||+.|+++.|+||||..+|+++|+++||++ ++|.+.||||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999942 7999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 003103 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (847)
Q Consensus 575 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (847)
.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|++|+++.++++++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003103 655 VSITIRIVLGFMLI 668 (847)
Q Consensus 655 ~~~n~~~~~~~~~~ 668 (847)
+.+|...++...+.
T Consensus 669 ~~yn~~~iplA~~g 682 (713)
T COG2217 669 FGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHh
Confidence 99998766554443
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.4e-81 Score=748.30 Aligned_cols=501 Identities=26% Similarity=0.359 Sum_probs=435.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEee
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g 176 (847)
.|.+++.++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
...||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+|||.+++++++ +++++|+.++++++++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999998875 6799999999999987665
Q ss_pred HHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecC
Q 003103 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (847)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DK 335 (847)
+++..++.+++++...+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+++++|+++++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 55544443443334456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEE
Q 003103 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (847)
Q Consensus 336 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~ 415 (847)
|||||+|+|+|.++.. ..+.++++++.+++..+..+ .||++.|+++++.+. +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s-~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGS-THPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999998753 23456777787777665444 499999999876421 11 24666665554311
Q ss_pred -EE-cCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCC
Q 003103 416 -YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (847)
Q Consensus 416 -~~-~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (847)
++ ..+|+. +..|+++.+.+ ..+.+.+.++++.++|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 224543 34589988754 12334455678899999999999854 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
+|||++++|++||++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 367889999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (847)
Q Consensus 574 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (847)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+++++++||++++++++..+++++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003103 654 AVSITIRIVLGF 665 (847)
Q Consensus 654 ~~~~n~~~~~~~ 665 (847)
++.+|...+...
T Consensus 697 a~~~n~~~i~~a 708 (741)
T PRK11033 697 ALGLKAIFLVTT 708 (741)
T ss_pred HHHHHHHHHHHH
Confidence 999997655433
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-83 Score=719.75 Aligned_cols=536 Identities=24% Similarity=0.328 Sum_probs=451.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCe-EEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCc
Q 003103 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (847)
Q Consensus 100 ~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~ 178 (847)
...+++.++.+...++.....|+..++..|+.+.+.++.++.+|+ .++||.+.|++||+|.+.||++||+||++++| +
T Consensus 343 t~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G-s 421 (951)
T KOG0207|consen 343 TSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG-S 421 (951)
T ss_pred ccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC-c
Confidence 334455567777777878888888899999999999999999996 89999999999999999999999999999999 5
Q ss_pred eEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHH
Q 003103 179 LKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIA 257 (847)
Q Consensus 179 ~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~ 257 (847)
++||||++|||++||.|++|+.|.+||.+.+|.....++++|.+|.+++|.+++++++ .+.|.|+.+|+++.++...++
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi 501 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVI 501 (951)
T ss_pred eeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhh
Confidence 7999999999999999999999999999999999999999999999999999999986 788999999999998766555
Q ss_pred HHHHHHHHhhhhccc----------cchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCC
Q 003103 258 VGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (847)
Q Consensus 258 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~ 327 (847)
+..++.++++.+... ..+..++..++++++++|||+|.+++|++...|....+++|+++|..+.+|.+.+
T Consensus 502 ~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hk 581 (951)
T KOG0207|consen 502 VLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHK 581 (951)
T ss_pred HHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhc
Confidence 544443333332222 3456678888999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCC
Q 003103 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (847)
Q Consensus 328 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s 407 (847)
+++++||||||||+|++.|.++.. .....+..+++.+++..+..+ .||+..|+++++.+............+..|..
T Consensus 582 v~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 582 VKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPG 658 (951)
T ss_pred CCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccceeecccC
Confidence 999999999999999999998764 332355666777666655544 49999999999864331111111122222222
Q ss_pred CCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 003103 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (847)
Q Consensus 408 ~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~ 487 (847)
+.....+. .+|+. .+-|.-+.+...-. ...+++++.+++....|..+.+++... +++|+
T Consensus 659 ~g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv 717 (951)
T KOG0207|consen 659 EGIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG-------------QLVGV 717 (951)
T ss_pred CCcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEE
Confidence 22221111 13433 66799888765322 234557777888889999999999987 89999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
+.++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++||. +|||
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~a 767 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYA 767 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEe
Confidence 9999999999999999999999999999999999999999999974 3899
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHH
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i 647 (847)
.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+||+.+|+..++.+++.+|++.+|+
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhh
Q 003103 648 KNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDG 690 (847)
Q Consensus 648 ~~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 690 (847)
|.|+.|++.+|+..++...+.++.+++.++|+.-.....++..
T Consensus 848 k~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSv 890 (951)
T KOG0207|consen 848 KLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSV 890 (951)
T ss_pred HHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhH
Confidence 9999999999998888777777777777888876666655554
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.1e-78 Score=703.17 Aligned_cols=475 Identities=36% Similarity=0.539 Sum_probs=415.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEE
Q 003103 105 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182 (847)
Q Consensus 105 ~~~i~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vd 182 (847)
+++++++.+++.++++++++..+.+.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||++++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345678888899999999999999988 788899999999 99999999999999999999999999999999 68999
Q ss_pred eccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCC-CCchHHHHHHHH-HHHHHHHHHHH
Q 003103 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-VGHFQKVLTAIG-NFCICSIAVGI 260 (847)
Q Consensus 183 es~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~-~~~~~~~~~~~~-~~~~~~i~~~~ 260 (847)
||+|||||.|+.|.+++.+++||.+.+|+..+.|+++|.+|..+++..++.+... ++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987654 678899999988 45443333322
Q ss_pred HHHHHhhhhcccc--chHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCc
Q 003103 261 VAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 338 (847)
Q Consensus 261 ~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGT 338 (847)
++.++.++..... +|..++.+++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222222211112 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEEEEc
Q 003103 339 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYID 418 (847)
Q Consensus 339 LT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~ 418 (847)
||+|+|++.++... . . ....+||++.|+++++.. +.+...||++.+++++++++.
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987641 1 0 123459999999987642 123567999999999988875
Q ss_pred CCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcch
Q 003103 419 SDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDS 498 (847)
Q Consensus 419 ~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 498 (847)
.++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 323 4689999999988742 2334556788999999999876 7999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHH
Q 003103 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIV 578 (847)
Q Consensus 499 ~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV 578 (847)
+++|+.|+++|++++|+|||++.+|..+|+++|| ++|++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 658 (847)
Q Consensus 579 ~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 658 (847)
+.+|++|+.|+|+|||+||+|||++|||||+|+ |+++||++|+++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003103 659 IRIVLGFML 667 (847)
Q Consensus 659 ~~~~~~~~~ 667 (847)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 876555443
No 26
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-78 Score=665.49 Aligned_cols=795 Identities=21% Similarity=0.247 Sum_probs=523.3
Q ss_pred HHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHH
Q 003103 24 IEEVFEQLKCSREGLTS-DEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFV 102 (847)
Q Consensus 24 ~~~~~~~l~~~~~GLs~-~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~ 102 (847)
.++.+..++. .+|+.. .|++.-.++||.|....+.+++-..|.+....||+ +|++..+..|.+. .+|++.+
T Consensus 150 ~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfF-VFQVFcvgLWCLD------eyWYySl 221 (1160)
T KOG0209|consen 150 TDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFF-VFQVFCVGLWCLD------EYWYYSL 221 (1160)
T ss_pred cCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCcee-eHhHHhHHHHHhH------HHHHHHH
Confidence 3443333332 357764 34444455699999999999998889999999995 4555555555553 5888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcC---CCeeccceEEEeeCce
Q 003103 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGDPL 179 (847)
Q Consensus 103 ~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~---G~~vPaD~~ll~g~~~ 179 (847)
+-+++++....--..|+.++-+.++. +...+..+.|+|+++|+.+.++||.|||+|.+.. ...||||.++++| +|
T Consensus 222 FtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G-sc 299 (1160)
T KOG0209|consen 222 FTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG-SC 299 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-ce
Confidence 87776666555445566665544443 3345668899999999999999999999999976 6689999999999 68
Q ss_pred EEEeccccCCCceeecCCC-----------------Cccccceeeee-------------ceEEEEEEeccchhHhhhHH
Q 003103 180 KIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGKAA 229 (847)
Q Consensus 180 ~Vdes~LTGEs~pv~K~~~-----------------~~v~~Gt~v~~-------------G~~~~~V~~tG~~T~~g~i~ 229 (847)
.|||+||||||.|..|.+- ..+|.||.+++ |-+.+.|++||.+|..|++.
T Consensus 300 iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLv 379 (1160)
T KOG0209|consen 300 IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLV 379 (1160)
T ss_pred eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCcee
Confidence 9999999999999999762 36899999986 55999999999999999988
Q ss_pred Hhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc------cchHhHHHHHHHHHHHhhcCchhHHHHHHH
Q 003103 230 HLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (847)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~ 302 (847)
+.+-. +++.+.-.+. .+ +++.+++++.++ ...|.+.. ++-...+..+..++...+|+.||+-++++.
T Consensus 380 Rtilf~aervTaNn~E--tf--~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAV 453 (1160)
T KOG0209|consen 380 RTILFSAERVTANNRE--TF--IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAV 453 (1160)
T ss_pred eeEEecceeeeeccHH--HH--HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHH
Confidence 76544 3333321111 11 111111111111 12232221 223344566777888999999999999999
Q ss_pred HHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeeccc-------CCChHHHHHHHHHhc----
Q 003103 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK-------GVEKEHVILLAARAS---- 371 (847)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~-------~~~~~~~l~~~~~~~---- 371 (847)
-.+...|+|.+++|..|-.+.-.|+||+.|||||||||+..|.|..+.-..... ..+.+.+..+|+..+
T Consensus 454 NsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~l 533 (1160)
T KOG0209|consen 454 NSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLL 533 (1160)
T ss_pred HHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998754210000 112223333333222
Q ss_pred -cccCcchHHHHHHHhcCChHHH----------hccceEEEeecCCCCCcceEEEEEcCC----CcEEEEEcCcHHHHHH
Q 003103 372 -RTENQDAIDAAIVGMLADPKEA----------RAGVREVHFLPFNPVDKRTALTYIDSD----GNWHRASKGAPEQILA 436 (847)
Q Consensus 372 -~~~~~~~~~~ai~~~~~~~~~~----------~~~~~~~~~~pf~s~~k~~~v~~~~~~----g~~~~~~KGa~e~i~~ 436 (847)
..-.+||++.|.++..+...+. ....++.+.+.|+|.-|||+++..... -+++..+|||||.|.+
T Consensus 534 e~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ 613 (1160)
T KOG0209|consen 534 EDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQE 613 (1160)
T ss_pred cCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHH
Confidence 1224699999999887422111 124667888999999999999875321 3688899999999998
Q ss_pred hcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCC--------CCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhC
Q 003103 437 LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508 (847)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 508 (847)
+.. +.++.+++...+++++|.||+|++||+++. -.+++.|++|+|.|++.|..|+|+|++++|++|+++
T Consensus 614 ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~S 690 (1160)
T KOG0209|consen 614 MLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNS 690 (1160)
T ss_pred HHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhcc
Confidence 765 568889999999999999999999999873 236789999999999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------------------Cc-c-------------------cCccccc
Q 003103 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPS-------------------SS-L-------------------LGQDKDA 549 (847)
Q Consensus 509 GI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~-------------------~~-~-------------------~~~~~~~ 549 (847)
+++++||||||+.||.++|+++||..+..+. .. + +|...+.
T Consensus 691 SH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~ 770 (1160)
T KOG0209|consen 691 SHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDH 770 (1160)
T ss_pred CceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHH
Confidence 9999999999999999999999996531100 00 0 0111110
Q ss_pred cCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHH------------
Q 003103 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA------------ 617 (847)
Q Consensus 550 ~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a------------ 617 (847)
....+.+.+++.++.||||+.|.||..++..||+.|+.++|||||.||++|||+||||||+=+++.-+
T Consensus 771 l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~ 850 (1160)
T KOG0209|consen 771 LQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKL 850 (1160)
T ss_pred HhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhcc
Confidence 11122445566778899999999999999999999999999999999999999999999984322200
Q ss_pred -----------------------------------------------------------hhccCEEEcCCChhhHHHHHH
Q 003103 618 -----------------------------------------------------------RSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 618 -----------------------------------------------------------~~aaDivl~~~~~~~i~~~i~ 638 (847)
.-||.+.-.-.+.+++-+.|+
T Consensus 851 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIr 930 (1160)
T KOG0209|consen 851 KLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIR 930 (1160)
T ss_pred ccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHH
Confidence 001111112235778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhhhcccccCCCCC-----CCCCCcccHHH
Q 003103 639 TSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKP-----SPQPDSWKLKE 713 (847)
Q Consensus 639 ~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~-----~~~~~~~~~~~ 713 (847)
.||++.-+.-+.... +.-|-.+..........-+.-|...|...-.++.....+.++-.++-. +|.|+-.+.-
T Consensus 931 QGRctLVtTlQMfKI-LALN~LisAYslSvlyldGVKfgD~QaTisGlLla~cFlfISrskPLetLSkeRP~~nIFN~Y- 1008 (1160)
T KOG0209|consen 931 QGRCTLVTTLQMFKI-LALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAACFLFISRSKPLETLSKERPLPNIFNVY- 1008 (1160)
T ss_pred hcchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHHHhheecCCchhhHhhcCCCCCcchHH-
Confidence 999987765554332 223322211222222233456777787777776655444443333211 2223222111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccC--CChhHHHHHHHHHHHHHHHHHhhhhccCCCCc----ccc
Q 003103 714 IFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLR--TRPDEMMAALYLQVSIISQALIFVTRSRSWSF----IER 787 (847)
Q Consensus 714 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~----~~~ 787 (847)
++. + +.+-+..-+..++|........-+...+. +.+ =.+.-..|..| .+++.++...|.+...+.++ ++|
T Consensus 1009 ~i~-s-vl~QFaVH~~tLvYi~~~a~~~~p~~~~v-dl~~~F~PsllNt~vy-iisl~~QvsTFAVNY~G~PF~Esl~eN 1084 (1160)
T KOG0209|consen 1009 IIL-S-VLLQFAVHIATLVYITGEAYKLEPPEEKV-DLEEKFSPSLLNTTVY-IISLAQQVSTFAVNYQGRPFRESLREN 1084 (1160)
T ss_pred HHH-H-HHHHHHHHHHHhhhhHHHHHhcCCccccc-ChhcccChhhhhhHHH-HHHHHHHHHHhhhhccCcchhhhhhhc
Confidence 111 1 11112222222333322211111110000 000 01223456665 45778888888888877544 334
Q ss_pred chHHHHHHHHHHHHHHHHhhhc-cccccccccccccC------hhhHHHHHHHHhhhHHHHHHhh
Q 003103 788 PGLLLATAFVIAQLVRVHFHLT-NLNTTIHMGSSFVS------VHDFSWYLFIETSSLSEMMHLF 845 (847)
Q Consensus 788 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~l~i~~~~f~~~~~~~ 845 (847)
+ .++.+++.+..+.+.+..- .+.....|+..+++ +..|..+=+++.-..|+.++++
T Consensus 1085 K--~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~ 1147 (1160)
T KOG0209|consen 1085 K--GLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFF 1147 (1160)
T ss_pred c--chHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4555555544443333332 22222234434443 2233333344444578888775
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=7.3e-77 Score=694.12 Aligned_cols=519 Identities=26% Similarity=0.366 Sum_probs=433.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECC-eEEEEeCCCCCC
Q 003103 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVP 155 (847)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg-~~~~I~~~~Lv~ 155 (847)
++.++++++++.+ .|.++..++++++++..++.++++|+++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3445556666665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhcc
Q 003103 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (847)
Q Consensus 156 GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 235 (847)
||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999988776
Q ss_pred C-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCc
Q 003103 236 N-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (847)
Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (847)
+ +++++++.+++++.++...++++.++.+++++. .... .++..++++++++|||+||+++++++..+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 4 678999999999888665544433333333222 2222 77889999999999999999999999999999999999
Q ss_pred eeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCC--hHHHHHHHHHhccccCcchHHHHHHHhcCChHH
Q 003103 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKE 392 (847)
Q Consensus 315 lvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~ 392 (847)
++|+++++|++|++|++|||||||||+|+|+|.++... .+.+ +++++.+++.++... .||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQSS-SHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987631 2222 567777776665544 49999999988643211
Q ss_pred Hhccce-EEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecC
Q 003103 393 ARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIP 471 (847)
Q Consensus 393 ~~~~~~-~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~ 471 (847)
.... + ..+++| . +..... .+|. ..+..|+++.+ + ... .+ .+..++.++.+.++|+|+++++.+.
T Consensus 309 ~~~~-~~~~~~~~---~-~gi~~~---~~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP---G-KGVEAT---VDGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec---C-CeEEEE---ECCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111221 1 111111 1342 24557888876 2 111 11 1223455667888999999999754
Q ss_pred CCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCcccccc
Q 003103 472 EKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (847)
Q Consensus 472 ~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~ 550 (847)
+++|.+.++|++|||++++|++|+++| +++.|+|||+..++.++++++|+..
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------- 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------- 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------
Confidence 899999999999999999999999999 9999999999999999999999842
Q ss_pred CCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCCh
Q 003103 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 630 (847)
Q Consensus 551 ~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~ 630 (847)
+|+++.|++|.++++.+|+.++.|+|+|||.||++|+++||||+++|++++.+++.||+++.++++
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666 (847)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (847)
+.+++++++||++++|+++++.|++.+|+..++..+
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654443
No 28
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.1e-77 Score=692.82 Aligned_cols=500 Identities=30% Similarity=0.410 Sum_probs=425.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCC
Q 003103 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (847)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~G 156 (847)
++.++++++++.+ +|.++.+++++++++..++.++++|+++.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4556677777765 789999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC
Q 003103 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 236 (847)
Q Consensus 157 DiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 236 (847)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 57999999999999999999999999999999999999999999999999999888764
Q ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCce
Q 003103 237 -QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (847)
Q Consensus 237 -~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (847)
+++++++.+++++.++...++++.++.+++++... .+..++.+++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 67899999999998866555443443333333222 233378889999999999999999999999999999999999
Q ss_pred eccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhc
Q 003103 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (847)
Q Consensus 316 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (847)
+|+++++|++|++|++|||||||||+|+|++.++.. .+++.+++..+. ...||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999988642 256666665444 345999999998764321
Q ss_pred cceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC
Q 003103 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (847)
Q Consensus 396 ~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~ 475 (847)
.....+.+|. + .... ..+|+. +..|+++.+.+.. .+.+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g---~-gi~~---~~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG---E-GVRA---VVDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC---C-eEEE---EECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 1222222221 1 1111 124543 3468887654311 014566788888776543
Q ss_pred CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcc
Q 003103 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (847)
Q Consensus 476 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~ 554 (847)
.+.|.+.++|++|||++++|++|+++|+ ++.|+|||+..+|..+++++|+..
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------- 404 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------------- 404 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------
Confidence 8999999999999999999999999999 999999999999999999999842
Q ss_pred hHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhH
Q 003103 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 555 ~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i 633 (847)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+||++| +|++.++++||+++.+++++.+
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 58899999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665 (847)
Q Consensus 634 ~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 665 (847)
.+++.+||++++|+++++.|++.+|+..++..
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 506 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLA 506 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997655443
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.9e-76 Score=688.34 Aligned_cols=506 Identities=26% Similarity=0.377 Sum_probs=423.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~ 175 (847)
+|.....+++++.++..++.+.++|+++.+++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4445555677788888999999999999999999999999999985 677999999999999999999999999999999
Q ss_pred eCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHH
Q 003103 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (847)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (847)
| .+.||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+||+.+++++++ +++++++..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 57899999999999999999999999999999999999999999999999999998764 678999999999988765
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEec
Q 003103 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (847)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~D 334 (847)
.+++..++. ++.| ..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~-~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALIT-FVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHH-HHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 544433322 2222 24788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEE
Q 003103 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (847)
Q Consensus 335 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v 414 (847)
||||||+|+|++.++.. ..+.++++++.+++..+..++ ||++.|+++++.............+.+|- +....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~g----~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIPG----IGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEECC----ceEEE
Confidence 99999999999998753 224556778888777665554 99999999876422110111122222221 11111
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCC
Q 003103 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (847)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (847)
. .+| ..+..|+++.+.+... + +.++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 244 3456799998654211 1 112346899999887654 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhH
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 574 (847)
|||++++|++||+.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 003103 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (847)
Q Consensus 575 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (847)
.++++.+|++++.|+|+|||.||+||+++||+||+||.|++.++++||+++.+++++.+++++++||+++++|++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccHH
Q 003103 655 VSITIRIVLGFMLIALIWKFDFSPF 679 (847)
Q Consensus 655 ~~~n~~~~~~~~~~~~~~~~~~~~~ 679 (847)
+.+|+..++..+.....+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876665555544444445553
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.3e-75 Score=710.90 Aligned_cols=521 Identities=24% Similarity=0.303 Sum_probs=435.7
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEee
Q 003103 98 WQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (847)
Q Consensus 98 ~~~-~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g 176 (847)
|++ +..+++++.++..++.+.+.|+.+.+++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 444 5667888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
...||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+|+|.+++++++ +++++++..++++.+++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999998774 6788999999999886655
Q ss_pred HHHHHHHHHHhhhhcccc--chHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEe
Q 003103 256 IAVGIVAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 333 (847)
Q Consensus 256 i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~ 333 (847)
++++.++.++ .|...+. .+...+..++++++++|||+|++++|+++..+..+++|+|+++|+++++|+++++|++||
T Consensus 444 v~~~a~~~~~-~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAA-IWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHH-HHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 4443333222 2322222 255678889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceE
Q 003103 334 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 413 (847)
Q Consensus 334 DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~ 413 (847)
|||||||+|+|+|.+... ..+.++++++.+++..+..++ ||++.|+++++.+.. .... .+|.....+ .
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-G 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGL-G 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecce-E
Confidence 999999999999987652 224566777777776665544 999999988754210 0111 122222111 1
Q ss_pred EEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCC
Q 003103 414 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (847)
Q Consensus 414 v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (847)
+... .+|+ .+.+|+++.+.+.... .+.+.+.++++.++|.+++.++++. .++|++.++|+
T Consensus 591 v~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 1111 2453 3567999987542211 2345566778889999999999865 79999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
+||+++++|++|++.|+++.|+|||+..+|..+++++||.. +|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHH
Confidence 99999999999999999999999999999999999999842 689999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (847)
Q Consensus 574 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (847)
|.++++.+|++|+.|+|+|||.||+|||++||+||+||+|++.++++||+++++++++.|.+++++||++++||++|+.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCccHHHHH
Q 003103 654 AVSITIRIVLGFMLIALI-WKFDFSPFMVL 682 (847)
Q Consensus 654 ~~~~n~~~~~~~~~~~~~-~~~~~~~~~~l 682 (847)
++.+|+..++..++.+.. .++.++|+.-.
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~ 810 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVVAG 810 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHHHH
Confidence 999998766544432221 23346776543
No 31
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=4.6e-77 Score=705.67 Aligned_cols=683 Identities=18% Similarity=0.227 Sum_probs=512.5
Q ss_pred HHhhcCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (847)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~ 121 (847)
+.++|-.|.+.+.|++.+ +.+++||.++.+++|++.++++++.. . +...|...+.+++++.++++-+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~-~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPL-S--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcc-c--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998764 78899999999999999999998862 2 3345667777888889999999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEECCe-EEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC----ceEEEeccccCCCceeecC
Q 003103 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (847)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~ 196 (847)
+++...+ .+..++.|.|++. +++..|++|++||+|++..++.+|||.++++++ .|+|++++|+||++.+.|+
T Consensus 105 R~~~D~~---iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKE---VNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHH---hhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 8877644 4678899998644 899999999999999999999999999999764 4999999999999999885
Q ss_pred CC-----------------------------------------------Cccccceeeeece-EEEEEEeccchhHhhhH
Q 003103 197 PY-----------------------------------------------DEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (847)
Q Consensus 197 ~~-----------------------------------------------~~v~~Gt~v~~G~-~~~~V~~tG~~T~~g~i 228 (847)
.- ++++.|+++.+++ +.++|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 31 2467788888775 89999999999987653
Q ss_pred HHhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh--hhhcc---c--------c-----chHhHHHHHHHHHHHhh
Q 003103 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (847)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~---~--------~-----~~~~~~~~~~~ll~~~i 290 (847)
. -..+.+++.+++.++.....+++..+..+++..+. .|... . . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 22334777888888887655433332222221111 11110 0 0 01123455667778899
Q ss_pred cCchhHHHHHHHHHHHHHh------h----cCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCCh
Q 003103 291 PIAMPTVLSVTMAIGSHRL------S----QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (847)
Q Consensus 291 P~~L~~~~~~~~~~~~~~l------~----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~ 360 (847)
|.+|++.+.+.....+.-. . ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 9999999999988776322 2 34688999999999999999999999999999999999876432221110
Q ss_pred --------------------------------------------HHHHHHHHHhccc-------------cCcchHHHHH
Q 003103 361 --------------------------------------------EHVILLAARASRT-------------ENQDAIDAAI 383 (847)
Q Consensus 361 --------------------------------------------~~~l~~~~~~~~~-------------~~~~~~~~ai 383 (847)
.+.....+.|+.. ....|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 1122333333211 1135778888
Q ss_pred HHhcCCh----------------HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcC-CChHHHH
Q 003103 384 VGMLADP----------------KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (847)
Q Consensus 384 ~~~~~~~----------------~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~-~~~~~~~ 446 (847)
+..+.+. ......++.++.++|+|.||||||+++.++|+..++||||+.+|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7765321 0014578899999999999999999999999999999999999999998 4556778
Q ss_pred HHHHHHHHHHHccCeEEEEEeeecCCCC-------------------------CCCCCCCceEEEEecccCCCCcchHHH
Q 003103 447 KVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPRHDSAET 501 (847)
Q Consensus 447 ~~~~~~~~~~~~G~rvl~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~ 501 (847)
+..+++++|+.+|+|+|++|||++++++ .+.+|+||+++|.+++||+++++|+++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 8888999999999999999999998653 235799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcc---------------------------------------
Q 003103 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--------------------------------------- 542 (847)
Q Consensus 502 I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~--------------------------------------- 542 (847)
|+.|++||||+||+|||+.+||.+||.+|++..+....-.+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997542211000
Q ss_pred ------cCccccccCCcchHHHH---HH--hcCeEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCChhhhhhcCcceec
Q 003103 543 ------LGQDKDASIAALPVDEL---IE--KADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 543 ------~~~~~~~~~~~~~~~~~---~~--~~~v~ar~sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.|......+++++.... .. +..++||++|.||+.+|+..++. +.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 00000001111111111 11 34589999999999999999854 89999999999999999999999999
Q ss_pred c--cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----ccHHHHHHH
Q 003103 611 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFD----FSPFMVLII 684 (847)
Q Consensus 611 g--~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~~----~~~~~~l~~ 684 (847)
+ +|.+++ .+||+.+.+.+|..-..+ .+||+.|.|+.+++.|.+++|+...+..+++.++.+|. +.++++.+.
T Consensus 820 sG~EGmQAv-msSD~AIaqFrfL~rLLL-VHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAV-MSSDFAIAQFRFLERLLL-VHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhh-hcccchHHHHHHHhhhhe-eecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 566555 499999977655554433 45999999999999999999999988888888887764 455666666
Q ss_pred HHHh-hhhhcccccCCCCCC-------CC-----C-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003103 685 AILN-DGTIMTISKDRVKPS-------PQ-----P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRK 738 (847)
Q Consensus 685 ~l~~-~~~~~~l~~~~~~~~-------~~-----~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 738 (847)
|++. ..+.+.++.-..+.+ |. + +.....+.++.++..|+++++++|++.+..+.
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~ 965 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFE 965 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhhe
Confidence 6654 445566654332221 11 1 11223455666677799999999876666653
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-75 Score=628.01 Aligned_cols=700 Identities=20% Similarity=0.252 Sum_probs=494.3
Q ss_pred HHHhhcCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC-CchhhHHHHHHHHHHHHHHHHHHH
Q 003103 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRD-PDWQDFVGIIVLLVINSTISFIEE 119 (847)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~-~~~~~~~~i~~~i~~~~~~~~~~e 119 (847)
.++++|-+|.+...|++.+ ..+++||..++++++++.++.++......+.. .+|...++++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999998887643 45567888888888877777766643333322 245555556666666667777776
Q ss_pred HHHHHHHHHHhhcCCCeEEEE-ECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC----ceEEEeccccCCCceee
Q 003103 120 NNAGNAAAALMANLAPKTKVL-RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (847)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V~-rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~----~~~Vdes~LTGEs~pv~ 194 (847)
+++.+.. +....+++ |||...+ |++++++||+|.++.+++||||.++++.+ +|+|.+..|+||++.+.
T Consensus 154 ~~rd~~~------Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDREL------NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhh------hhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 6665433 33444554 6776555 99999999999999999999999999542 68999999999999887
Q ss_pred cCC-----------------------------------------------CCccccceeeeeceEEEEEEeccchhHhhh
Q 003103 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (847)
Q Consensus 195 K~~-----------------------------------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 227 (847)
|-| .|+++++|.+.+|.+.|+|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 744 1579999999999999999999999963
Q ss_pred HHHhhhcc---CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 003103 228 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (847)
Q Consensus 228 i~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~ 304 (847)
.++.. .+.+.++..+|.+.+++.+.+++..++ ++.....+..|...+.+++.++...||.+|-+.+.++..+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 33333 255667888888888766554442222 2222234677888899999999999999999999999998
Q ss_pred HHHHhhcC----CceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCCh--------------------
Q 003103 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (847)
Q Consensus 305 ~~~~l~~~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~-------------------- 360 (847)
.+....+. |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 88777664 678999999999999999999999999999999999876432211111
Q ss_pred --------------HHHHHHHHHhcccc----C--------cchHHHHHHHhcC-----------------ChHHHhccc
Q 003103 361 --------------EHVILLAARASRTE----N--------QDAIDAAIVGMLA-----------------DPKEARAGV 397 (847)
Q Consensus 361 --------------~~~l~~~~~~~~~~----~--------~~~~~~ai~~~~~-----------------~~~~~~~~~ 397 (847)
.+.....+.|+... + ..|.+.|++++-+ .+......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 11122223332211 0 1344444443311 111123478
Q ss_pred eEEEeecCCCCCcceEEEEEcC-CCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC-
Q 003103 398 REVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK- 475 (847)
Q Consensus 398 ~~~~~~pf~s~~k~~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~- 475 (847)
++++.+||+|+.|||+++++++ .|+...+.|||+-+|....+. .+++++...+|+++|+|++.+|.|.+++++.
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999986 589999999999998876653 5688888999999999999999999986531
Q ss_pred -------------------------CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003103 476 -------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (847)
Q Consensus 476 -------------------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~ 530 (847)
..+|.||+++|+.|.||+++++++.+++.||+|||++||+|||+.+||+.||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 1368999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccc----------------Cccc-cccCCc-----------chHHHHHHh--cCeEEEeChhhHHHHHHH
Q 003103 531 GMGTNMYPSSSLL----------------GQDK-DASIAA-----------LPVDELIEK--ADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 531 Gi~~~~~~~~~~~----------------~~~~-~~~~~~-----------~~~~~~~~~--~~v~ar~sP~qK~~iV~~ 580 (847)
++.+......++. ++.. .--+++ +|+-++..+ ..|+||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 9965322111110 0000 001122 233443333 358999999999999999
Q ss_pred Hhhc-CCEEEEEcCCcCChhhhhhcCcceec-c-cccHHHhhccCEEEcCCChhhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 003103 581 LQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYAVS 656 (847)
Q Consensus 581 lq~~-g~~V~miGDG~ND~~aLk~AdVGIam-g-~g~~~a~~aaDivl~~~~~~~i~~~i~~-gR~~~~~i~~~i~~~~~ 656 (847)
+|+. |..|+++|||.||+.|+++||+||++ | +|.+ |.-|||+.+ ..|+.+-+++.+ ||..|+|-.+..+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQ-ASLAADfSI--tqF~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQ-ASLAADFSI--TQFSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccc-cchhccccH--HHHHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 89999999999999999999999999 6 5555 556999999 459999988866 99999999998888765
Q ss_pred HHHHHHHHHHHHH-HhhcCCccHHH----HHHHHHHhhhhhcccccCCCCCC----CCC---------CcccHHHHHHHH
Q 003103 657 ITIRIVLGFMLIA-LIWKFDFSPFM----VLIIAILNDGTIMTISKDRVKPS----PQP---------DSWKLKEIFATG 718 (847)
Q Consensus 657 ~n~~~~~~~~~~~-~~~~~~~~~~~----~l~~~l~~~~~~~~l~~~~~~~~----~~~---------~~~~~~~~~~~~ 718 (847)
....+......+. .++-.|....| +.+..+-+-.+.+++-.|+.-.+ ..| +....+ -|..+
T Consensus 853 RGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYK-tF~iw 931 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYK-TFFIW 931 (1051)
T ss_pred hhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchh-hhhhh
Confidence 5543332222221 12212333233 22333333344566666653221 011 112223 34444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHh-hhhccC
Q 003103 719 VVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALI-FVTRSR 780 (847)
Q Consensus 719 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~-~~~rs~ 780 (847)
++..++++.+....+++.+...++ ...++.|.++++..++.+ +-++++
T Consensus 932 vLISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~tw 980 (1051)
T KOG0210|consen 932 VLISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRTW 980 (1051)
T ss_pred hhHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhhh
Confidence 555777776665544444332221 223567888887777764 333443
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-65 Score=541.74 Aligned_cols=520 Identities=25% Similarity=0.368 Sum_probs=402.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEE
Q 003103 69 FMWNPLSWVMEAAAIMAIALA----NGGGRDPDWQDFVGIIVL----LVINSTISFIEENNAGNAAAALMANL-APKTKV 139 (847)
Q Consensus 69 ~~~~~~~~~l~~~~il~~~~~----~~~~~~~~~~~~~~i~~~----i~~~~~~~~~~e~~~~~~~~~l~~~~-~~~~~V 139 (847)
+.+||..++.++.++++.++. ..++...++.....+.++ +++..+-+.+.|-|.+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 456887777666666665322 111111222222223333 33334445566666666666666533 336677
Q ss_pred EEC-CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC---CccccceeeeeceEEEE
Q 003103 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (847)
Q Consensus 140 ~rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~~ 215 (847)
+++ |.++.+++.+|+.||+|.+++||+||+||.+++| ..+||||.+||||-||.|.+| +.+-.||.+++..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 8999999999999999999999999999999999 679999999999999999998 67999999999999999
Q ss_pred EEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--ccchHhHHHHHHHHHHHhhcC
Q 003103 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ--HRKYRDGIDNLLVLLIGGIPI 292 (847)
Q Consensus 216 V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~iP~ 292 (847)
+++...+|.+.|+..+++.++ +++|-+--++.+..-+. ++++++ ..-.|++. ...-...+...++++++.+|-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---liFL~~-~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LIFLLA-VATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HHHHHH-HHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998875 56664443333211111 110111 11111111 101112355678899999999
Q ss_pred chhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 003103 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (847)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (847)
.+.-.++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|+-.-.++.+ ..+.+.+++...+..++.
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhh
Confidence 98888877777789999999999999999999999999999999999999876666653 457888888877777665
Q ss_pred ccCcchHHHHHHHhcCChH-HH-hccce-EEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCCh-HHHHHH
Q 003103 373 TENQDAIDAAIVGMLADPK-EA-RAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKV 448 (847)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~-~~-~~~~~-~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~ 448 (847)
... .|-..+++..+.+.. +. .+... ..++.||+.+.+++.+-.. ++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 443 555566665543211 11 11111 3578999988776665322 23 5677999999998776433 367888
Q ss_pred HHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 003103 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (847)
Q Consensus 449 ~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~ 528 (847)
+...++-++.|-..++++... +++|.+.++|-+||+.+|-+.+||+.|||++|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999998765 8999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce
Q 003103 529 RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 529 ~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
+.|.++ ..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999853 47899999999999999999999999999999999999999999
Q ss_pred ecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHH
Q 003103 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644 (847)
Q Consensus 609 amg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~ 644 (847)
||.+|+++||||+++|=+|+|-..+.+.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999863
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.4e-35 Score=309.46 Aligned_cols=220 Identities=36% Similarity=0.527 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe-eCceEE
Q 003103 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKI 181 (847)
Q Consensus 104 i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~-g~~~~V 181 (847)
++++++++.++++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||++||||++++ | .+.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-cccc
Confidence 567788899999999999999999999888887 999999999999999999999999999999999999999 6 7999
Q ss_pred EeccccCCCceeecC-----CCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 182 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 182 des~LTGEs~pv~K~-----~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+.....+ +++++++.++++..++...
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887765 4589999999998886655
Q ss_pred HHHHHHHHHHhhhh-ccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhh
Q 003103 256 IAVGIVAEIIIMYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (847)
Q Consensus 256 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 324 (847)
+++..++.+++.+. ....++...+..++++++.++|++||+++++++..++++|.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 44433333322222 2567788899999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=2.9e-26 Score=236.37 Aligned_cols=211 Identities=32% Similarity=0.410 Sum_probs=151.1
Q ss_pred eEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCC
Q 003103 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (847)
Q Consensus 328 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s 407 (847)
|++||||||||||+|++.+ . . .+.+.++..+...+..+ .||+..++..+....... ..... |..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s-~~p~~~~~~~~~~~~~~~-~~~~~-----~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGS-EHPIGKAIVEFAKNHQWS-KSLES-----FSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTS-TSHHHHHHHHHHHHHHHH-SCCEE-----EEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcC-CCcchhhhhhhhhhccch-hhhhh-----hee
Confidence 6899999999999999999 1 1 34555565555444444 499999988876532221 11111 111
Q ss_pred CCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 003103 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (847)
Q Consensus 408 ~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~ 487 (847)
...+...... ++. +. |+++.+.+..... ............+|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1111111111 122 22 8888877654311 1111222233455666666664 3489999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
+.+.|++||+++++|+.|+++|++++|+|||+..+|.++|+++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred Ee--ChhhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcC
Q 003103 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (847)
Q Consensus 568 r~--sP~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad 605 (847)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.61 E-value=3.1e-15 Score=132.65 Aligned_cols=124 Identities=25% Similarity=0.383 Sum_probs=107.5
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHh
Q 003103 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (847)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (847)
...+.++---++=++++++|++|++. +++++.|||...+-...|.-+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777778889999999999999 99999999999999999999998532
Q ss_pred cCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec-c--cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 563 ~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam-g--~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
++||..-|+.|.++++.|++++++|.|+|||.||.+||++||+||.. + +.++-+.++||+++. +...+++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl~ 146 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDLL 146 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHHh
Confidence 47999999999999999999999999999999999999999999986 5 456677899999984 344544443
No 37
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.41 E-value=2.8e-12 Score=128.65 Aligned_cols=166 Identities=15% Similarity=0.196 Sum_probs=114.6
Q ss_pred cCCccHHHHHHHHHHhhhh-hcccccCCCCCC-----CCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 003103 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQPD--SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (847)
Q Consensus 673 ~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~-----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (847)
|.|++|+|++|+|+++|.+ ++++++|+++++ |+++ +...++++..++..|+.+++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5689999999999999987 899999998764 2222 22346788888999999999999888877641
Q ss_pred cccccc--cCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc----cchHHHHHHHHHHHHHHHHhhhcccccccccc
Q 003103 745 AFGVRS--LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE----RPGLLLATAFVIAQLVRVHFHLTNLNTTIHMG 818 (847)
Q Consensus 745 ~~~~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (847)
++... .+....+++|++|.+++++|.++.+++|+++.+.++ +.|++++.+++++.++. ++..|.+.....|+
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQ-ILIVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHH-HHHHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHH-HHHhcchhhHhhhc
Confidence 11100 001234689999999999999999999996643222 24668888887776664 44445555555699
Q ss_pred ccccChhhHHHHHHHHhhh--HHHHHHhh
Q 003103 819 SSFVSVHDFSWYLFIETSS--LSEMMHLF 845 (847)
Q Consensus 819 ~~~~~~~~~~~~l~i~~~~--f~~~~~~~ 845 (847)
+.++++.+|.+++++.... .+|..|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999998887766655 89999875
No 38
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.40 E-value=5.8e-13 Score=110.41 Aligned_cols=67 Identities=36% Similarity=0.534 Sum_probs=60.7
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-ccchHHHHHHHHHhHHHHHHHHHHHHH
Q 003103 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIMA 85 (847)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~~~~il~ 85 (847)
||+++.++++++|+++ .+|||++||++|+++||+|.++.+ +++.|+.|+++|.+|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999966 889999999999999999999655 567789999999999999999999886
No 39
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.16 E-value=3.5e-08 Score=109.42 Aligned_cols=209 Identities=17% Similarity=0.195 Sum_probs=142.7
Q ss_pred ceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-----------CCCCcc-------c
Q 003103 482 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM-----------YPSSSL-------L 543 (847)
Q Consensus 482 l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~-----------~~~~~~-------~ 543 (847)
-.|.|++....+.|++....|+.|-++-||.+-.|-.+....+-.|.++||.... .|.... .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 4689999999999999999999999999999999999999999999999995411 111100 0
Q ss_pred Cc-------------ccc--ccCC-----------------------cchHHH-----------------HHHhcCeEEE
Q 003103 544 GQ-------------DKD--ASIA-----------------------ALPVDE-----------------LIEKADGFAG 568 (847)
Q Consensus 544 ~~-------------~~~--~~~~-----------------------~~~~~~-----------------~~~~~~v~ar 568 (847)
++ ++. ..++ +....+ +-.-+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 00 000 0000 000000 0001235889
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCh--hhhhhcCcceeccc--c-----------cHH-HhhccC----------
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDA--PALKKADIGIAVAD--A-----------TDA-ARSASD---------- 622 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~--~aLk~AdVGIamg~--g-----------~~~-a~~aaD---------- 622 (847)
++|+.--++++.+|++|++|+.+|...|-. --.-+||++|++.. . +.. ..++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 999999999999999999999999998843 34468999998741 1 111 011233
Q ss_pred -------EEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhcCCccHHHHHHHHHHhhh
Q 003103 623 -------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM-LIALIWKFDFSPFMVLIIAILNDG 690 (847)
Q Consensus 623 -------ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 690 (847)
+-+....+-++..+|+-+|....-+|+.++|.+.......+..+ ..++++|..++.-+++|...+.-.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~P 1130 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIP 1130 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHH
Confidence 22222234466788888999999999999999888775544443 345566777777888888877553
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.07 E-value=3.3e-10 Score=92.50 Aligned_cols=60 Identities=43% Similarity=0.708 Sum_probs=53.2
Q ss_pred HcCCCCC-CCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 003103 30 QLKCSRE-GLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (847)
Q Consensus 30 ~l~~~~~-GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~ 89 (847)
.++++.+ |||++||++|+++||+|+++.++ +++|+.++++|++|+.++|+++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4667744 99999999999999999999876 778899999999999999999999998753
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.97 E-value=2.8e-09 Score=108.31 Aligned_cols=131 Identities=15% Similarity=0.117 Sum_probs=96.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.|+.+|+.| ++.++||-....+..+++++|+.... ......... ..+++. .-..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~-an~l~~~~~--g~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDS--DRVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhh-ceeeEEecC--CeeECe------------eecCcc
Confidence 57999999999999975 99999999999999999999996321 111000000 000000 014578
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~g 640 (847)
+|...++.+++.|..+.|+|||.||.+|++.||+||++.....+.+++-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998655555555555333 4577777777654
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.90 E-value=6.9e-09 Score=112.56 Aligned_cols=131 Identities=18% Similarity=0.256 Sum_probs=97.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE-EeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-r~sP 571 (847)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.......-.+..+ .++.. +.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~----------v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGN----------VLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeE----------ecCccCCc
Confidence 47899999999999999999999999988888899999985311100000000 00000 000 0234
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..+..++.
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6889888888654 3 5688999999999999999999999 788889999999998888988876653
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.86 E-value=9.9e-09 Score=106.15 Aligned_cols=129 Identities=21% Similarity=0.275 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE-eCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 571 (847)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.... ....... +..... .+.++ ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~-~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF-ANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-eeEEEEE---CCEEEE----------EecCcccCC
Confidence 57999999999999999999999999999999999999985311 1000000 000000 00111 123
Q ss_pred hhHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 572 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 572 ~qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
..|..+++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||+++.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665543 34789999999999999999999986 467788899999999999887654
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.80 E-value=4.3e-08 Score=102.17 Aligned_cols=153 Identities=24% Similarity=0.313 Sum_probs=104.8
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc-----Ccc------------
Q 003103 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-----GQD------------ 546 (847)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~~~-----~~~------------ 546 (847)
|.+.-.|. +.+.+.++|+++++.|+++++.||.....+..+++++|+..... .+..+. +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999853211 000000 000
Q ss_pred -----------------ccc-----------cCCcchHHHHHHhcC--e-------EEEeChhh--HHHHHHHHhhc-C-
Q 003103 547 -----------------KDA-----------SIAALPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQER-K- 585 (847)
Q Consensus 547 -----------------~~~-----------~~~~~~~~~~~~~~~--v-------~ar~sP~q--K~~iV~~lq~~-g- 585 (847)
... ....+++.+.+++.. + +....|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 000 000012222222211 1 12344443 77777777654 2
Q ss_pred --CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 586 --HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 586 --~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..+.++||+.||.+|++.|++|+||+++.+.+|++||+|..+++-.++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 35899999999999999999999999999999999999998888888887775
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.78 E-value=2.3e-08 Score=103.14 Aligned_cols=144 Identities=19% Similarity=0.250 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc-C--------ccccc-------------
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-G--------QDKDA------------- 549 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~~~-~--------~~~~~------------- 549 (847)
++.+++.++|++|++.|+++.+.||.+...+..+++++++..... ....+. . .....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999863211 000000 0 00000
Q ss_pred --------------cCCc---chHHHHHHhcCe-------EEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCcCChh
Q 003103 550 --------------SIAA---LPVDELIEKADG-------FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAP 599 (847)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~v-------~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ND~~ 599 (847)
..+. +.+.+.+.+..+ +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 112222222111 112333 4788888877654 3 34899999999999
Q ss_pred hhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 600 aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
|++.|+.|+||+++.+.+|+.||+|..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999977666666543
No 46
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.76 E-value=1.7e-08 Score=88.42 Aligned_cols=65 Identities=32% Similarity=0.470 Sum_probs=53.8
Q ss_pred CcchHHHHHHHhcC------ChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC
Q 003103 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 440 (847)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~ 440 (847)
.++|.|.|++.++. +....+..+++++.+||+|++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 45889999988763 23456788999999999999999999998 3345677999999999999973
No 47
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.73 E-value=1.1e-07 Score=101.45 Aligned_cols=154 Identities=22% Similarity=0.221 Sum_probs=107.3
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC---------CCCcc-------------
Q 003103 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---------PSSSL------------- 542 (847)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~---------~~~~~------------- 542 (847)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 88999999999999999999999999999999999999964110 00000
Q ss_pred --------------cCcc-----------c-------------------------cccCCcchHHHHH---Hh-----cC
Q 003103 543 --------------LGQD-----------K-------------------------DASIAALPVDELI---EK-----AD 564 (847)
Q Consensus 543 --------------~~~~-----------~-------------------------~~~~~~~~~~~~~---~~-----~~ 564 (847)
.... . ......+...+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0 0000011112211 11 11
Q ss_pred eE-------EEeCh--hhHHHHHHHHhhc-CCE---EEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChh
Q 003103 565 GF-------AGVFP--EHKYEIVKRLQER-KHI---CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (847)
Q Consensus 565 v~-------ar~sP--~qK~~iV~~lq~~-g~~---V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~ 631 (847)
.+ -.+.| .+|..-++.+.+. |-. |+++||+.||.+||+.|+.|||||++.+.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 23333 3788888877763 543 99999999999999999999999999999999999888888888
Q ss_pred hHHHHHHH
Q 003103 632 VIISAVLT 639 (847)
Q Consensus 632 ~i~~~i~~ 639 (847)
++.++++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 98888864
No 48
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.73 E-value=3.8e-08 Score=96.49 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=79.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe--ChhhHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 577 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--sP~qK~~i 577 (847)
.+|+.|++.|+++.++|+.+...+....+++|+.. .|... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 57999999999999999999999999999999852 11111 23333444
Q ss_pred HHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 578 V~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
.+.++-....++|+||+.||.+|++.|++++||+++.+..++.||+|..+++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444333456999999999999999999999999999999999999986544
No 49
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.70 E-value=9e-08 Score=93.02 Aligned_cols=97 Identities=28% Similarity=0.403 Sum_probs=77.9
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 580 (847)
+|++|++.|+++.++||+....+..+.++.|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998531 1111 234444444
Q ss_pred Hhh----cCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 581 lq~----~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
+.+ ....+.|+||+.||.+|++.|++++++.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 432 2356999999999999999999999999888889999999997553
No 50
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.69 E-value=6.9e-08 Score=103.30 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=54.6
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|.+.+|++||+|..+++-.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555544433 2 35899999999999999999999999999999999999998888888887775
No 51
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.68 E-value=1e-07 Score=102.16 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCE--EEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi--vl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|++||. |..+++-.++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 466666666544 3 35899999999999999999999999999999999996 666777778877774
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.65 E-value=2.3e-07 Score=96.36 Aligned_cols=146 Identities=23% Similarity=0.306 Sum_probs=99.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCc-c-------------cCc------------
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-L-------------LGQ------------ 545 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~-~-------------~~~------------ 545 (847)
.+.+.+.++|+++++.|+++++.||.+...+..+.+++|+..... .... + ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643110 0000 0 000
Q ss_pred --c-------cc----c---cCCcchHHHHHHhcC---------eEEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCC
Q 003103 546 --D-------KD----A---SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (847)
Q Consensus 546 --~-------~~----~---~~~~~~~~~~~~~~~---------v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG 594 (847)
. .. . ..+.+...++.++.. .+..+.| ..|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00 0 000111222222211 1223334 3788878777654 3 468999999
Q ss_pred cCChhhhhhcCcceecccccHHHhhccCEEEcCCChhh----HHHHHH
Q 003103 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 638 (847)
Q Consensus 595 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~----i~~~i~ 638 (847)
.||.+|++.|++|+||+++.+..|+.||.|..+++-.. +...++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999987777667 555443
No 53
>PRK10976 putative hydrolase; Provisional
Probab=98.62 E-value=1.7e-07 Score=100.07 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=53.0
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC--EEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD--ivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|.+.+|+.|| .|..+++-.++..+|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555554433 2 3489999999999999999999999999999999988 6777777778877775
No 54
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.61 E-value=1.7e-07 Score=95.69 Aligned_cols=110 Identities=19% Similarity=0.181 Sum_probs=82.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe-C
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-F 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~-s 570 (847)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+.......-....+ .++ -.+.... .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~lt----------G~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLT----------GRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEe----------ceeeeeecC
Confidence 678999999999999999999999999999999999999996532111000000 000 1134433 4
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEEcCCcCChhhhhhcCcceecccccH
Q 003103 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATD 615 (847)
Q Consensus 571 P~qK~~iV~~lq~~-g~---~V~miGDG~ND~~aLk~AdVGIamg~g~~ 615 (847)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.++++.....
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence 47899888666553 55 48899999999999999999999985433
No 55
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.55 E-value=4e-07 Score=93.08 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.... .. .+...+.. .... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~-~~~~~~~~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CH-SLEVDEDG-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cc-eEEECCCC-eEEC------------ccccccc
Confidence 4589999999999999 999999999999999999999985311 10 00000000 0000 0012478
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCE-EEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi-vl~~~~~~~i~~~i 637 (847)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887544444445665 44 5566665544
No 56
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.52 E-value=2.6e-07 Score=97.26 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=100.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc---------------------------
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 543 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~~~--------------------------- 543 (847)
..+.+++.+++++++++|+++.+.||..+..+..+..++++..... ..+.+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4567899999999999999999999999999999999999862110 000000
Q ss_pred ---------------Ccc---c-----------------------------cccCCcchHHHHH-------HhcCe----
Q 003103 544 ---------------GQD---K-----------------------------DASIAALPVDELI-------EKADG---- 565 (847)
Q Consensus 544 ---------------~~~---~-----------------------------~~~~~~~~~~~~~-------~~~~v---- 565 (847)
... . ....+.+.++++. .....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 0 0000111111111 11101
Q ss_pred ---EEEeCh--hhHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 566 ---FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 566 ---~ar~sP--~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
+-.++| ..|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..++.||.+....+=.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 223444 5788888877753 3568899999999999999999999999999999999999987665777665
Q ss_pred H
Q 003103 637 V 637 (847)
Q Consensus 637 i 637 (847)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 57
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.51 E-value=3.1e-07 Score=92.00 Aligned_cols=110 Identities=23% Similarity=0.300 Sum_probs=83.3
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 579 (847)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998421 11 1234555444
Q ss_pred HH-hhcC---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCC----ChhhHHHHHHHHH
Q 003103 580 RL-QERK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP----GLSVIISAVLTSR 641 (847)
Q Consensus 580 ~l-q~~g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~----~~~~i~~~i~~gR 641 (847)
.+ ++.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++..+ .+..+.+.+...|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 44 3333 4699999999999999999999999888888888999998533 2344455454333
No 58
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.47 E-value=7.7e-07 Score=95.27 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|++||++.+..++.||+|..+++-.++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 455555544332 3 35899999999999999999999999988889999999998888888888775
No 59
>PLN02887 hydrolase family protein
Probab=98.45 E-value=6.5e-07 Score=104.08 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=48.5
Q ss_pred EEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 587 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 587 ~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|+++|||.||.+||+.|+.|||||+|.+.+|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888888888775
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.44 E-value=7.2e-07 Score=90.75 Aligned_cols=117 Identities=26% Similarity=0.376 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+... ........... .. .-..+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~g--~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDEKG--FI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcCCC--eE----------ecceeeEEccc
Confidence 5799999999999999999999999999999999999997431 11000000000 00 00012234567
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD 622 (847)
.|...++.+.++ | ..+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788777776544 2 3589999999999999999999999755555666665
No 61
>PRK08238 hypothetical protein; Validated
Probab=98.41 E-value=6.4e-05 Score=86.09 Aligned_cols=101 Identities=16% Similarity=0.215 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
|++|++.+.++++++.|+++.++|+-+...+..+++++|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111110 1135677
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~ 618 (847)
.|.+.++.....+ -+.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 7766554322222 25689999999999999999999985544433
No 62
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.38 E-value=1.6e-06 Score=91.98 Aligned_cols=64 Identities=25% Similarity=0.292 Sum_probs=53.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
.|..-++.+.+. | ..++++||+.||.+|++.|+.|+||+++++..++.||++..+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 477777777654 2 468999999999999999999999999999999999999987776666543
No 63
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.38 E-value=3.1e-06 Score=89.79 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=51.3
Q ss_pred hHHHHHHHHhhc------CCEEEEEcCCcCChhhhhhcCcceeccccc---HHHhhc--c-CEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGIamg~g~---~~a~~a--a-Divl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|..+++-.++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 455555555433 346999999999999999999999999887 467876 4 58877888888887775
No 64
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.35 E-value=3e-06 Score=87.32 Aligned_cols=135 Identities=13% Similarity=0.058 Sum_probs=87.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccC-ccccccCCcchHHHHHHhcCeE--E-
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG-QDKDASIAALPVDELIEKADGF--A- 567 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~--a- 567 (847)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.......+....+ ......... -..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 46899999999999999999999999999888888888754322211111111 100000000 0000 0
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh--hccCEEEcCCChhhHHHHHH
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~--~aaDivl~~~~~~~i~~~i~ 638 (847)
++ ...|..+++.++.....+.|+|||.||..|++.||+.++-+.-.+-.+ ..+.+.. ++|..+...+.
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11 347999999998888888999999999999999999877552111111 1222222 56777776664
No 65
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.32 E-value=1.2e-06 Score=84.19 Aligned_cols=102 Identities=23% Similarity=0.259 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCc--------ccCccccccCCcchHHHHHHhcC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS--------LLGQDKDASIAALPVDELIEKAD 564 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 564 (847)
.+-|++++.++.|++.|.+|.++||--..-+..+|.++||+...+-... ..|.+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 3468999999999999999999999999999999999999742111111 11111100
Q ss_pred eEEEeChhhHHHHHHHHhhc--CCEEEEEcCCcCChhhhhhcCcceecc
Q 003103 565 GFAGVFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 565 v~ar~sP~qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
.-+...-|.++++.+++. -..++|+|||.||.+|+..||-=|+.+
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 011234799999999885 357899999999999999977776665
No 66
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.32 E-value=8.4e-07 Score=89.49 Aligned_cols=92 Identities=24% Similarity=0.292 Sum_probs=70.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh-h-
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 573 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~-q- 573 (847)
+++.+.|+.++++|++++++||+....+..+++.+|++... +.+..... + .+....+|.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~----~------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD----N------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC----T------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee----c------ccceeeeeECCCCCC
Confidence 78889999999999999999999999999999999996421 11111000 0 012246777766 5
Q ss_pred -HHHHHHHH------hhcCCEEEEEcCCcCChhhhh
Q 003103 574 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (847)
Q Consensus 574 -K~~iV~~l------q~~g~~V~miGDG~ND~~aLk 602 (847)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
No 67
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.27 E-value=2.4e-06 Score=79.59 Aligned_cols=115 Identities=23% Similarity=0.383 Sum_probs=88.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 579 (847)
-.|+.|.++||++.+|||.+...+..-|+++||..- |- =-++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~q--G~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------YQ--GISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------ee--chHhHHHHHH
Confidence 368999999999999999999999999999999521 11 1256666665
Q ss_pred HHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC----hhhHHHHHHHHHHHHHH
Q 003103 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQR 646 (847)
Q Consensus 580 ~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----~~~i~~~i~~gR~~~~~ 646 (847)
.|.++ -.-|+++||..||.|+|++..+++|..++..-.++.||+|+.... +..+.+.|..++..++-
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 55443 346899999999999999999999999999999999999987543 44445555555544443
No 68
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.24 E-value=8.2e-06 Score=87.31 Aligned_cols=66 Identities=21% Similarity=0.162 Sum_probs=49.3
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCcCChhhhhhcCcceeccccc-HH-----HhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~-------~g~~V~miGDG~ND~~aLk~AdVGIamg~g~-~~-----a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+ ....|.++|||.||.+||+.|++|||||++. +. .+..+|++....+-.++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56555555543 2346899999999999999999999998544 21 3447889988877778887775
No 69
>PLN02954 phosphoserine phosphatase
Probab=98.19 E-value=1.3e-05 Score=83.18 Aligned_cols=125 Identities=20% Similarity=0.274 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCcccCccccccCCcchHHHHHHhcCeEEE---
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 568 (847)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+ ..+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 368999999999999999999999999999999999999853 111100000000 000000
Q ss_pred ---eChhhHHHHHHHHhhc-C-CEEEEEcCCcCChhhhhh--cCcceecccc--cHHHhhccCEEEcCCChhhHHH
Q 003103 569 ---VFPEHKYEIVKRLQER-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 569 ---~sP~qK~~iV~~lq~~-g-~~V~miGDG~ND~~aLk~--AdVGIamg~g--~~~a~~aaDivl~~~~~~~i~~ 635 (847)
..+..|.+.++.+.++ | ..+.|+||+.||..|.+. ++++++.+.. .+.....+|+++ +++..+.+
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 1124477777777654 2 468899999999999777 5666666532 233445689988 45666654
No 70
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.16 E-value=1.8e-05 Score=84.83 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=51.2
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCcCChhhhhhcCcceecccccHHHh----hcc-CEEE--cCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~----~g-~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~----~aa-Divl--~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56665655543 24 789999999999999999999999999999988 666 6766 4455667766664
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.09 E-value=1.3e-05 Score=80.44 Aligned_cols=113 Identities=16% Similarity=0.088 Sum_probs=75.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchH-HHHHHhcCeEEE-e
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV-DELIEKADGFAG-V 569 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ar-~ 569 (847)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..+.+.+... ++... .-...++.++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF---IEIYSNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe---eEEeccCceE--CCCCcEEEecCCCCccCcCC
Confidence 478999999999999999999999999999999999998885321 0111111000 00000 000000111111 1
Q ss_pred ChhhHHHHHHHHhhc-CCEEEEEcCCcCChhhhhhcCccee
Q 003103 570 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 570 sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
....|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
No 72
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.03 E-value=9.4e-06 Score=80.71 Aligned_cols=100 Identities=23% Similarity=0.266 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
++|++.+.++.+++.|+++.++||.....+..+++.+|+... .... +... .+..+... ...-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~-~~~~-~~g~~~g~--------~~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANR-LEFD-DNGLLTGP--------IEGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeee-EEEC-CCCEEeCc--------cCCcccCCcch
Confidence 589999999999999999999999999999999999998531 1100 0000 00000000 00001245688
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCcCChhhhhhc
Q 003103 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (847)
Q Consensus 574 K~~iV~~lq~~----g~~V~miGDG~ND~~aLk~A 604 (847)
|...++.++++ ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34689999999999999875
No 73
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.00 E-value=2.9e-05 Score=80.32 Aligned_cols=135 Identities=11% Similarity=0.046 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCC-cccCccccccCCcchHHHHHHhcCeE-EEe
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSS-SLLGQDKDASIAALPVDELIEKADGF-AGV 569 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~-ar~ 569 (847)
+++|++.+.++.|++.|+++.++||-....+..+.++. +..... ... .+.+.............+ + .++
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~-------~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEH-------CQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcccc-------ccccC
Confidence 67999999999999999999999999998899888887 643111 000 011100000000000000 0 000
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh--hccCEEEcCCChhhHHHHHH
Q 003103 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 570 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~--~aaDivl~~~~~~~i~~~i~ 638 (847)
...|..+++.++.....+.|+|||.||.+|.++||+.++-+.-.+.++ ..+.+.+ ++|..+...++
T Consensus 146 -~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 146 -GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred -CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 124888899888777789999999999999999999777432112222 2243433 56777766653
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.93 E-value=3e-05 Score=80.38 Aligned_cols=125 Identities=17% Similarity=0.181 Sum_probs=87.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|+++.++||........+.++.|+.... . .+.+.+ -+.+..|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~------------------~~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-S--VVIGGD------------------SLPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-c--EEEcCC------------------CCCCCCc
Confidence 457899999999999999999999999999999999999985321 1 111100 0111222
Q ss_pred --hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceeccc----ccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 572 --~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~----g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
+--..+.+.++.....+.|+||+.||+.|.+.|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 22234444554445678999999999999999998 555532 2344455788888 778888887754
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.93 E-value=2.9e-05 Score=79.14 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=76.6
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeE-EEe
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF-AGV 569 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-ar~ 569 (847)
..++++++.+.++.+++.|++++++||.....+..+++.+|+..-. ........+ ...+++ +. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~-~~~l~~~~~--g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI-GTRLEESED--GIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE-ecceEEcCC--CEEeCC----------ccCCCC
Confidence 3568999999999999999999999999999999999999985311 110000000 000000 00 123
Q ss_pred ChhhHHHHHHHHhh-cCC---EEEEEcCCcCChhhhhhcCcceecc
Q 003103 570 FPEHKYEIVKRLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 570 sP~qK~~iV~~lq~-~g~---~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
.++.|...++.+.+ .+. .+.++||+.||.|+++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 46788887776654 342 5889999999999999999999886
No 76
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.86 E-value=4.2e-05 Score=79.08 Aligned_cols=127 Identities=18% Similarity=0.194 Sum_probs=92.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
...+-|+++++++.|+++|++..++|++....+..+.+..|+..... .+.+.+.. -..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCC----------------CCCCcC
Confidence 45678999999999999999999999999999999999999864221 11110000 011224
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcC---cceeccc--ccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad---VGIamg~--g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
|+......+.+.-..+.+.||||..+|..|=|+|+ ||+..|. +.......+|+++ +++..+...+.
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 55555666666555447999999999999999998 6666763 4566777799999 66777766553
No 77
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.75 E-value=6e-05 Score=70.67 Aligned_cols=118 Identities=15% Similarity=0.070 Sum_probs=76.1
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
.-..++++++.+.+++|++.|++++++||.....+....++.|+.... ...+......... .............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAIYY-PKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhhhc-ccccccccccccccCC
Confidence 345688999999999999999999999999999999999999873210 0011000000000 0000000011112345
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhh-cCccee
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 609 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~-AdVGIa 609 (847)
-.|+.+..+.+.+......+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56666777777776666789999999999999998 444443
No 78
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.69 E-value=0.0001 Score=75.21 Aligned_cols=124 Identities=18% Similarity=0.180 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+++++|++.|+++.++||.+...+...-+..|+.... + ..+ +.+. . ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~-~~~~---------------~-~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVI-GSDE---------------V-PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEE-ecCc---------------C-CCCCCChH
Confidence 67899999999999999999999999988888888888884311 0 000 0000 0 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-c--c--cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-m--g--~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
-=..+.+.++-....+.|+||+.+|..|-++|++... + | +..+..++.+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2233334444334669999999999999999998543 2 3 23344567899988 6666665544
No 79
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.58 E-value=0.00028 Score=73.09 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.6
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.+..-+++.++|++|++.|++++++||..+..+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555668999999999999999999999999999999999984
No 80
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.55 E-value=0.00031 Score=74.18 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=93.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--CC-CCCc-c-cCc--------------------
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN--MY-PSSS-L-LGQ-------------------- 545 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~--~~-~~~~-~-~~~-------------------- 545 (847)
..+..|+..++++++++.|+.++..||......+.+.+++++..+ .+ .++. + ...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345678899999999999999999999999999999998887542 00 0100 0 000
Q ss_pred --------------c-ccc-------cCCcch----H---HHHHHhc--Ce---EE-----EeCh--hhHHHHHHHHhhc
Q 003103 546 --------------D-KDA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER 584 (847)
Q Consensus 546 --------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~a-----r~sP--~qK~~iV~~lq~~ 584 (847)
. ... ....+. + .+.+... .+ ++ .+.| ..|..-++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 000 000001 1 1111111 11 11 3344 4788888887664
Q ss_pred ----CCEEEEEcCCcCChhhhhh-cCcceecccccHHHhhccC-------EEEcCCChhhHHHHHH
Q 003103 585 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (847)
Q Consensus 585 ----g~~V~miGDG~ND~~aLk~-AdVGIamg~g~~~a~~aaD-------ivl~~~~~~~i~~~i~ 638 (847)
...|.++||+.||.+|++. ++.|++|+++.+..++.++ ++.....-+.+.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 6799999998888776443 4443444556666554
No 81
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.41 E-value=0.00059 Score=72.93 Aligned_cols=123 Identities=16% Similarity=0.210 Sum_probs=79.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.++++.|++.|+++.++||.....+..+.++.|+.... + .+.+.+. ..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~--~i~~~d~------------------~~~~Kp 158 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R--WIIGGDT------------------LPQKKP 158 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e--EEEecCC------------------CCCCCC
Confidence 467899999999999999999999999988888888888874311 0 0100000 000112
Q ss_pred h--hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceec--c--cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 572 E--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 572 ~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam--g--~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+ -=..+.+.+.-....+.|+||+.||..|.++|++ .+++ | ...+.....+|.++ +++..+..++
T Consensus 159 ~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 159 DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 1 1122223332234568899999999999999997 3444 3 22333455789988 5677766543
No 82
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.40 E-value=0.00077 Score=69.33 Aligned_cols=124 Identities=18% Similarity=0.141 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+.... ..+.+.+.. -..+-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF---DVVITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce---eEEEecCcC----------------CCCCCCcH
Confidence 36799999999999999999999999999998888999985311 001110000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc---eecccc--cHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG---IAVADA--TDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG---Iamg~g--~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
-=.++.+.+.-....+.|+||..+|..|-++|++- +.-|.+ .+.....+|+++ +++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 22334444433345688999999999999999984 333422 223445688887 6677776654
No 83
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.32 E-value=0.0018 Score=68.96 Aligned_cols=139 Identities=12% Similarity=0.120 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCC--C-CC---C--CCC----ccc----------------
Q 003103 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-NM---Y--PSS----SLL---------------- 543 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~iA~~~Gi~--~-~~---~--~~~----~~~---------------- 543 (847)
.+-+++.++|++|++ .|++++++||..........+.+++. . +. . ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445789999999998 79999999999999988888776642 0 00 0 000 000
Q ss_pred ---Ccccc----------ccCC--cchHHHHH----HhcC--------eEEEeCh--hhHHHHHHHHhhc----CCEEEE
Q 003103 544 ---GQDKD----------ASIA--ALPVDELI----EKAD--------GFAGVFP--EHKYEIVKRLQER----KHICGM 590 (847)
Q Consensus 544 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------v~ar~sP--~qK~~iV~~lq~~----g~~V~m 590 (847)
|...+ ...+ .+.+.++. +... -+-.+.| .+|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0001 11111111 1111 1223344 3788777766544 356889
Q ss_pred EcCCcCChhhhhhc----CcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 591 iGDG~ND~~aLk~A----dVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+||+.||.+|++.+ +.||+||++. ..|++.|. +-..+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999764 35778774 444554444
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.28 E-value=0.0018 Score=66.88 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=35.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
-+.+.++|+.|++.|++++++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999985
No 85
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.27 E-value=0.00034 Score=73.16 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=55.2
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC----EEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD----ivl~~~~~~~i~~~i~ 638 (847)
..|..-++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=.++.++|.
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3678878877654 3 2478999999999999999999999999999999999 7766666667777775
No 86
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.24 E-value=0.00097 Score=68.39 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=77.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... + .+.+.+. ..+..|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S--VLIGGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c--EEEecCC------------------CCCCCCC
Confidence 57899999999999999999999999998999999999985321 1 1111100 0111222
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-c--ccc--cHHHhhccCEEEcCCChhhHHH
Q 003103 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 573 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-m--g~g--~~~a~~aaDivl~~~~~~~i~~ 635 (847)
-=....+.+.-....+.|+||..||..|.++|++-.. + |.+ .+.....+|.++ +++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 1122223332233568899999999999999998654 3 322 123334688887 55666543
No 87
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.04 E-value=0.0019 Score=66.79 Aligned_cols=119 Identities=14% Similarity=0.142 Sum_probs=77.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
-++.|++.++++.|++.|+++.++|+........+.++.|+..... ..+.+ +. .....|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~-~~------------------~~~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASA-EK------------------LPYSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEc-cc------------------CCCCCC
Confidence 4678999999999999999999999999998999999999854211 01100 00 001112
Q ss_pred hhHHHHHHHHhhcC---CEEEEEcCCcCChhhhhhcCcceec-ccc---cHHHhhccCEEEcCCChhhHH
Q 003103 572 EHKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 572 ~qK~~iV~~lq~~g---~~V~miGDG~ND~~aLk~AdVGIam-g~g---~~~a~~aaDivl~~~~~~~i~ 634 (847)
+-. -+-+.+++.| ..+.|+||..||+.|-++|++.... ..+ .+.-...+|.++ .++..+.
T Consensus 150 ~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 150 HPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred CHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 221 2334444443 4588999999999999999986544 222 222223577777 5566554
No 88
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.00 E-value=0.0045 Score=66.08 Aligned_cols=118 Identities=11% Similarity=0.078 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+.+...+..+-+..|+..... ..+. +...+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~-----------------------~~~~~~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQA-----------------------GTPILS 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEe-----------------------cCCCCC
Confidence 567999999999999999999999999999999999999853210 0000 000011
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCccee-cccc--c--HHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIGIA-VADA--T--DAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVGIa-mg~g--~--~~a~~aaDivl~~~~~~~i~~~i 637 (847)
.+.-+.+.+++. ...++|+||+.+|..|-++|++-.. +..| + +.....+|+++ +++..+.+.+
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 122222333332 3468999999999999999988533 2222 2 23344689988 6787777655
No 89
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.98 E-value=0.0086 Score=63.26 Aligned_cols=133 Identities=12% Similarity=0.086 Sum_probs=82.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE---
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 568 (847)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..... .+..+.... +++ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f--~~d---------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDF--DED---------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEE--CCC---------CeEeCCCC
Confidence 4679999999999999999999999999999999999999853210 110000000 000 00111
Q ss_pred --eChhhHHHHHHH-----Hh--hcCCEEEEEcCCcCChhhhhhc---Ccceecc--cc-c----HHHhhccCEEEcCCC
Q 003103 569 --VFPEHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-T----DAARSASDIVLTEPG 629 (847)
Q Consensus 569 --~sP~qK~~iV~~-----lq--~~g~~V~miGDG~ND~~aLk~A---dVGIamg--~g-~----~~a~~aaDivl~~~~ 629 (847)
+....|.+.+.. ++ .....|.++|||.||++|..-. +--+.+| +. . +.=+++=|+||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011345554432 22 1235688999999999996543 2233444 22 1 234568899999887
Q ss_pred hhhHHHHHH
Q 003103 630 LSVIISAVL 638 (847)
Q Consensus 630 ~~~i~~~i~ 638 (847)
=-.++.+|.
T Consensus 266 t~~v~~~il 274 (277)
T TIGR01544 266 TLEVANSIL 274 (277)
T ss_pred CchHHHHHH
Confidence 656665553
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.93 E-value=0.002 Score=67.04 Aligned_cols=124 Identities=15% Similarity=0.126 Sum_probs=80.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. -..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 56899999999999999999999999988888887888874321 011110000 01112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-c--ccc--c-HHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--T-DAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-m--g~g--~-~~a~~aaDivl~~~~~~~i~~~i 637 (847)
-=..+.+.+.-....+.|+||+.||..|-++|++... + |.. . ......+|+++ +++..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 2234444454445669999999999999999998643 3 321 1 12234689988 6676665544
No 91
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.93 E-value=0.0041 Score=64.19 Aligned_cols=122 Identities=19% Similarity=0.204 Sum_probs=79.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
.++.||+.+.++.|++.|+++.++||-....+..+.+..|+.. +..+ ..+...+ ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~-------------------~~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSD-------------------VAAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCc-------------------CCCCC
Confidence 4789999999999999999999999999999999989898851 1111 1111100 00112
Q ss_pred hhhHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCccee--ccccc----HHHhhccCEEEcCCChhhHHHH
Q 003103 571 PEHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIA--VADAT----DAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 571 P~qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdVGIa--mg~g~----~~a~~aaDivl~~~~~~~i~~~ 636 (847)
|+.. .+-+.+++.| ..+.|+||+.+|..|-++|++..+ +..|. ......+|.++ ++++.+...
T Consensus 146 P~p~-~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 146 PAPD-LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred CCHH-HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 3221 2223333332 468999999999999999999863 32322 12234578777 556665543
No 92
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.89 E-value=0.0049 Score=65.19 Aligned_cols=94 Identities=17% Similarity=0.130 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.+.++.|++.|+++.++||.....+..+-++.|+..... ..+.+.+. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~--d~ii~~~~------------------~~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP--DYNVTTDD------------------VPAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC--ceEEcccc------------------CCCCCCC
Confidence 457899999999999999999999999999888888888754211 11111110 0011232
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdVG 607 (847)
...+.+.+++.| ..+.|+||..+|..|-+.|++-
T Consensus 159 -p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 -PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444443 3489999999999999999974
No 93
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.79 E-value=0.0066 Score=71.11 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=40.0
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
|.+.-.|. .-+.+.++|+.|+++|+.+++.||.....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55554443 4457899999999999999999999999999999999974
No 94
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.76 E-value=0.008 Score=64.12 Aligned_cols=122 Identities=13% Similarity=0.113 Sum_probs=78.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++-|++.++++.|++.|+++.++||.....+..+-+..|+..... ..+.+.+. ..+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~------------------~~~~KP~ 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDD------------------VPAGRPY 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCc------------------CCCCCCC
Confidence 567899999999999999999999999888777777776642110 11111100 0111232
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCc---ceecccc-------------------------cHHHhhc
Q 003103 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI---GIAVADA-------------------------TDAARSA 620 (847)
Q Consensus 573 qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdV---GIamg~g-------------------------~~~a~~a 620 (847)
..-+.+.+++.| ..+.||||..+|..|-+.|++ |+.-|.+ .+....-
T Consensus 161 -p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 239 (267)
T PRK13478 161 -PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAG 239 (267)
T ss_pred -hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 122344444443 458999999999999999997 3333422 1223445
Q ss_pred cCEEEcCCChhhHHHHH
Q 003103 621 SDIVLTEPGLSVIISAV 637 (847)
Q Consensus 621 aDivl~~~~~~~i~~~i 637 (847)
+|+++ +++..+...+
T Consensus 240 a~~vi--~~~~~l~~~l 254 (267)
T PRK13478 240 AHYVI--DTIADLPAVI 254 (267)
T ss_pred CCeeh--hhHHHHHHHH
Confidence 88888 6677776655
No 95
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.73 E-value=0.0019 Score=65.52 Aligned_cols=94 Identities=19% Similarity=0.115 Sum_probs=65.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
.+++.+++.++++.|++.|+++.++||-....+..+-+..|+..-. + .+.+.+ .+..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-~--~~~~~~-----------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-P--VQIWME-----------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-C--EEEeec-----------------CCCCCcC
Confidence 4556778899999999999999999999999999999999985321 0 110000 0111334
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhc
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~A 604 (847)
|+--....+.+.-....+.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444445555554556789999999999887764
No 96
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.71 E-value=0.013 Score=58.17 Aligned_cols=144 Identities=17% Similarity=0.187 Sum_probs=95.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCc----------------cccccCCcchH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ----------------DKDASIAALPV 556 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~----------------~~~~~~~~~~~ 556 (847)
++-|++.++++.|++. ...+++|---.+-++++|..+|++........+.-. ...+.++++++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4568999999998875 566777777778899999999995321111111000 00111222222
Q ss_pred HHHHHhcCeEEEeChhhHHHHHHHHhhc------------------CCEEEEEcCCcCChhhhhhcCc--ceecc-cccH
Q 003103 557 DELIEKADGFAGVFPEHKYEIVKRLQER------------------KHICGMTGDGVNDAPALKKADI--GIAVA-DATD 615 (847)
Q Consensus 557 ~~~~~~~~v~ar~sP~qK~~iV~~lq~~------------------g~~V~miGDG~ND~~aLk~AdV--GIamg-~g~~ 615 (847)
-+-++ .+|.|..|.+-.+|++..+.- ....+++||.+.|+.||+.+.= |+|+. +|.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 22111 258888887665665555532 2346889999999999998853 47777 7888
Q ss_pred HHhhccCEEEcCCChhhHHHHHHH
Q 003103 616 AARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 616 ~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
=|..-||+.+..++..+....|+.
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 888899999998888888777753
No 97
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.69 E-value=0.011 Score=62.30 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~ 534 (847)
+..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
No 98
>PRK11590 hypothetical protein; Provisional
Probab=96.63 E-value=0.0081 Score=61.62 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=73.7
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+-..+...++. . .=..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 57888999999999999999999999999621 0011111111000000 0 0123567
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 572 ~qK~~iV~~l-q~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
++|.+-++.. .......-+-||..||.|+|+.|+-+++++.
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8898877654 3333445688999999999999999999974
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.61 E-value=0.0091 Score=63.28 Aligned_cols=121 Identities=18% Similarity=0.103 Sum_probs=76.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... ...+.+.+.. ..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999888889885311 0111111000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce-ec-ccccHHHhhccCEEEcCCChhhHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-am-g~g~~~a~~aaDivl~~~~~~~i~ 634 (847)
-=....+.+.-....+.|+||..+|+.|-++|++-. ++ |.........+|.++ ++++.+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 112223333333456899999999999999999843 33 322222333578877 5565543
No 100
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.60 E-value=0.007 Score=61.99 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=73.3
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..|+... ..+.+-+.+.. ++ .. ..=..+.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~g---g~-----~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NG---GW-----VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CC---ce-----EcCccCCC
Confidence 46899999996 78989999999999999999999998665221 01111111100 00 00 01123567
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 572 ~qK~~iV~~l-q~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
++|.+-++.. .......-+-||..||.|||+.||-.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3223345688999999999999999999973
No 101
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.53 E-value=0.0074 Score=69.70 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..... ..+.+.+ +-.+-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~--~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT--ETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc--eeEecCC------------------CCCCCCcH
Confidence 678999999999999999999999999999999999999853210 0111100 00011232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecc--cccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg--~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
-=....+.++ ...+.|+||..+|+.|-+.|++ .|++. .+.+.....+|+++ ++++.+.+.+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1111222221 3468999999999999999998 34443 22222234588888 667777776643
No 102
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.45 E-value=0.012 Score=59.81 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~G 531 (847)
++.+++.+++++|++.|+++.++||.....+....++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
No 103
>PLN02382 probable sucrose-phosphatase
Probab=96.44 E-value=0.004 Score=70.41 Aligned_cols=71 Identities=25% Similarity=0.269 Sum_probs=51.0
Q ss_pred EeChh--hHHHHHHHHhhc----C---CEEEEEcCCcCChhhhhhcC-cceecccccHHHhhcc--------CEEEc-CC
Q 003103 568 GVFPE--HKYEIVKRLQER----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EP 628 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~----g---~~V~miGDG~ND~~aLk~Ad-VGIamg~g~~~a~~aa--------Divl~-~~ 628 (847)
.+.|. .|..-++.|.++ | ..|.++||+.||.+||+.|+ .||+|+++.+..++.+ +++.. +.
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 34443 488777777654 3 37899999999999999999 6999999998888643 55543 33
Q ss_pred ChhhHHHHHH
Q 003103 629 GLSVIISAVL 638 (847)
Q Consensus 629 ~~~~i~~~i~ 638 (847)
+-.+|.+++.
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 4455555554
No 104
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.37 E-value=0.0059 Score=63.39 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
.+.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..+.+.+.. ..
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQ 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CC
Confidence 34555999999999999999999997 667899999999995311 111111110 00
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
-.| +|. ..+++.| .+.|+||..||..|-++|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 3445555 478999999999999999873
No 105
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.34 E-value=0.018 Score=60.73 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=74.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+-....+...-+..|+.... + ..+.+.+.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F-d-~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF-Q-AVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC-c-EEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999988999985321 0 111111000 1112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-cccc---cHHHhhccCEEEc
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLT 626 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-mg~g---~~~a~~aaDivl~ 626 (847)
-=....+.+.-....+.|+||..+|..|-++|++-.. +..| .+.....+|.++.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 2233334444344568999999999999999988432 2222 1222346888883
No 106
>PRK06769 hypothetical protein; Validated
Probab=96.25 E-value=0.014 Score=57.83 Aligned_cols=98 Identities=9% Similarity=-0.038 Sum_probs=56.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCe
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 565 (847)
+.||+++++++|++.|+++.++|+.... .....-+..|+..-... .....+.. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC--PHKHGDGC----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC--cCCCCCCC----------------C
Confidence 6799999999999999999999987631 12222334555321000 00000000 0
Q ss_pred EEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee
Q 003103 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 566 ~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
..+-.|+-=....+.+.-.-+.+.|+||..+|..|-++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 01112222233334443333568999999999999999998544
No 107
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.23 E-value=0.051 Score=66.54 Aligned_cols=170 Identities=19% Similarity=0.186 Sum_probs=97.9
Q ss_pred HHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecc--cCCCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHH
Q 003103 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKE 525 (847)
Q Consensus 449 ~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 525 (847)
+...+.|...-.|.+++-+.. +++....- ...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344455555566777776643 33322110 12356899999999999 699999999999988877
Q ss_pred HHHHcCCCC---CCC----CCCc---ccC----------------------cccc---cc------CCcch--------H
Q 003103 526 TGRRLGMGT---NMY----PSSS---LLG----------------------QDKD---AS------IAALP--------V 556 (847)
Q Consensus 526 iA~~~Gi~~---~~~----~~~~---~~~----------------------~~~~---~~------~~~~~--------~ 556 (847)
.....++.- +.. +... ... ...+ .. ..+.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 665555310 000 0000 000 0000 00 00111 1
Q ss_pred HHHHHh----c--Ce-----EEEeCh--hhHHHHHHHHhhc--CCEEEEEcCCcCChhhhhhc---CcceecccccHHHh
Q 003103 557 DELIEK----A--DG-----FAGVFP--EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 618 (847)
Q Consensus 557 ~~~~~~----~--~v-----~ar~sP--~qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~A---dVGIamg~g~~~a~ 618 (847)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 11 113334 4788888888874 24799999999999999987 578888864 4
Q ss_pred hccCEEEcCCChhhHHHHH
Q 003103 619 SASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 619 ~aaDivl~~~~~~~i~~~i 637 (847)
.+|++.+.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788888543 4444444
No 108
>PRK11587 putative phosphatase; Provisional
Probab=96.23 E-value=0.017 Score=59.55 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. .. .+.+.+. ..+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~-~i~~~~~------------------~~~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PE-VFVTAER------------------VKRGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---cc-EEEEHHH------------------hcCCCCC
Confidence 568999999999999999999999987766655555666631 00 1111000 1112232
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eeccccc-HHHhhccCEEE
Q 003103 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVL 625 (847)
Q Consensus 573 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~-~~a~~aaDivl 625 (847)
-=....+.+.-....+.|+||..+|+.|-++|++- |++..+. ......+|+++
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 22222233332346789999999999999999984 5554332 22334577776
No 109
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.22 E-value=0.01 Score=61.64 Aligned_cols=87 Identities=23% Similarity=0.278 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
.|.+++.+.++.+++.|+++.++||. ...++..+.+..|++....- .. +++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-~v-----------------------il~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-PV-----------------------IFAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-eE-----------------------EEcC
Confidence 46788999999999999999999995 36688999988999421100 01 1221
Q ss_pred eCh--hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 569 VFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 569 ~sP--~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
-++ .+|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 111 34544 444555 478999999999999999884
No 110
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.05 E-value=0.018 Score=59.39 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+-+...+...-+.+|+.... + ..+.+.+ ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-D-AVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-c-EEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998887777777888874311 0 0110000 1122332
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhhcCc-ceecc
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdV-GIamg 611 (847)
.. .+-+.+++. ...+.|+||.. +|+.+-++|++ .|.+.
T Consensus 153 ~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22 233444444 35689999998 99999999987 44444
No 111
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.03 E-value=0.011 Score=56.96 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
.++|+-++.++.+++.+++++++|+--.--...+-.+++=.......... .+.. .......-.++... -..--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~-sn~~--~ih~dg~h~i~~~~---ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIV-SNND--YIHIDGQHSIKYTD---DSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEe-ecCc--eEcCCCceeeecCC---ccccCC
Confidence 46899999999999999999999876654444444444310000000000 0000 00000000000000 011235
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
+|...|+.+++..+.+-|||||+.|..|-+.+|+=.|=
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 89999999999999999999999999998888876653
No 112
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.01 E-value=0.032 Score=55.66 Aligned_cols=128 Identities=20% Similarity=0.087 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---------------tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
.+.||+.+++++|++.|+++.++|+.+.. ....+-++.|+.- . ..+..... ..++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~-~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---D-GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---c-eEEECCCC----CCCC--
Confidence 35799999999999999999999987621 1111223344410 0 00000000 0000
Q ss_pred HHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce-ecccccH---HHhhcc--CEEEcCCChh
Q 003103 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 631 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-amg~g~~---~a~~aa--Divl~~~~~~ 631 (847)
.-..+-.|+--....+.+.-..+.+.|+||..+|+.+-++|++.. .+..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001112233223334444434467899999999999999999742 2223321 112235 7777 5677
Q ss_pred hHHHHHH
Q 003103 632 VIISAVL 638 (847)
Q Consensus 632 ~i~~~i~ 638 (847)
.+.+.+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 7666553
No 113
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.82 E-value=0.026 Score=60.81 Aligned_cols=119 Identities=18% Similarity=0.148 Sum_probs=70.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-CcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.|+++.++|+-+......+-+..+.... ... ..+ +.+ -+.+..|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~-~~~~~~v-~~~------------------~~~~~KP 203 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPER-AQGLDVF-AGD------------------DVPKKKP 203 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccc-cCceEEE-ecc------------------ccCCCCC
Confidence 5689999999999999999999999887766655444432110 000 001 000 0111122
Q ss_pred hh--HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-ccc--HHHhhccCEEEcCCChhhH
Q 003103 572 EH--KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DAT--DAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 572 ~q--K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~--~~a~~aaDivl~~~~~~~i 633 (847)
+- =..+.+.+.-....+.||||+.+|+.|-++|++....- .|. .-....+|+++ +++..+
T Consensus 204 ~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 21 12233333333456899999999999999999865442 322 11123578887 444443
No 114
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.76 E-value=0.023 Score=61.74 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=74.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe
Q 003103 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (847)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... ..+.+.+. ....+.... -.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCCC
Confidence 568899999999999999999999999999999999999998753111 11111110 000000000 1234
Q ss_pred ChhhHHHHHHHHhh-cCCEEEEEcCCcCChhhhhhcCcce
Q 003103 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 570 sP~qK~~iV~~lq~-~g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
.|+-+....+.+-. .-..+.|+||..+|+.|-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46667766666533 2367899999999999999998864
No 115
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.70 E-value=0.032 Score=61.81 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=77.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..... .+.+.+. +.+-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd---~Iv~sdd------------------v~~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS---VIVAAED------------------VYRGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce---EEEecCc------------------CCCCCCC
Confidence 467999999999999999999999999999999888899853110 0111000 0111232
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-cccccHHH-hhccCEEEcCCChhhH
Q 003103 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADATDAA-RSASDIVLTEPGLSVI 633 (847)
Q Consensus 573 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-mg~g~~~a-~~aaDivl~~~~~~~i 633 (847)
-=....+.+.-....+.|+||..+|+.|-+.|++-.. +..+.+.. ...||+++ +++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2123334444345679999999999999999998433 23332222 23588887 556555
No 116
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.59 E-value=0.027 Score=58.33 Aligned_cols=93 Identities=11% Similarity=-0.027 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+-+...+...-+..|+.... + ..+.+.+ +.+-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-D-LLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-C-EEEEeee-------------------CCCCCCC
Confidence 56899999999999999999999998888877776777774211 0 0110000 1111222
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
- .-+.+.+++. ...+.|+||..+|+.|-++|++.
T Consensus 152 p-~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 152 Q-RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred H-HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 1 1122223333 34589999999999999999996
No 117
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.57 E-value=0.035 Score=57.24 Aligned_cols=120 Identities=12% Similarity=0.085 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++. +++.++|+-....+..+-++.|+.... + ..+...+ ..+..|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-d-~i~~~~~-------------------~~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-D-DIFVSED-------------------AGIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-C-EEEEcCc-------------------cCCCCCC
Confidence 5689999999999999 999999998888888888888885321 0 0110000 0011232
Q ss_pred hH--HHHHHHH-hhcCCEEEEEcCCc-CChhhhhhcCcc-eec--ccccHHHhhccCEEEcCCChhhHHHH
Q 003103 573 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADIG-IAV--ADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 573 qK--~~iV~~l-q~~g~~V~miGDG~-ND~~aLk~AdVG-Iam--g~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
.. ....+.+ .-....+.|+||.. +|..+-+++++- |.. +..+......+|.++ ++++.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 22 2222333 22234589999998 899999999973 333 222212223566666 556665543
No 118
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.56 E-value=0.027 Score=57.00 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... + ..+...+ ..+..|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-D-AVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-h-eeEehhh-------------------cCCCCCC
Confidence 46899999999999999999999998888888888888874211 0 0110000 1112233
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
.. ..+.+.+.-....+.|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 21 122233332345688999999999999988875
No 119
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.44 E-value=0.054 Score=50.85 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=60.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhc
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (847)
-++.|++.++++.|+++|+++.++|+.. ........+++|+..... ...+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL---YACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE---EECC-C-----------------
Confidence 3678999999999999999999999988 667777888888742100 0000 0
Q ss_pred CeEEEeChhhHHHHHHHHh-hcCCEEEEEcC-CcCChhhhhhcCc
Q 003103 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADI 606 (847)
Q Consensus 564 ~v~ar~sP~qK~~iV~~lq-~~g~~V~miGD-G~ND~~aLk~AdV 606 (847)
..+-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111121123334442 33466999999 5899999998876
No 120
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.34 E-value=0.15 Score=48.85 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=75.8
Q ss_pred HHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003103 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (847)
Q Consensus 452 ~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~G 531 (847)
.+.+.++|.|.+.+-... +++..= ....-|++++-+++++.+|+++.++|.-++..+..+++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 467888999998775432 333221 23345788889999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcC---CEEEEEcCCc-CChhhhhhcCc
Q 003103 532 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERK---HICGMTGDGV-NDAPALKKADI 606 (847)
Q Consensus 532 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g---~~V~miGDG~-ND~~aLk~AdV 606 (847)
++- ++--..|-- ..+-+++++.+ +.|+|+||-. .|+-+=+.|++
T Consensus 85 v~f------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 852 111122333 24556666653 5699999986 57765555544
No 121
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.16 E-value=0.054 Score=53.49 Aligned_cols=110 Identities=6% Similarity=-0.037 Sum_probs=68.7
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhc
Q 003103 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (847)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (847)
.....-+-++.|++.++++.|+++|+++.++|+- ....+..+-..+|+.... .. ..+....+ .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~---~~------------~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG---KT------------VPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC---Cc------------ccHHHhce-e
Confidence 3344445577899999999999999999999965 888888888888874100 00 00000000 0
Q ss_pred CeEEEeChhhH--HHHHHHHhhc------CCEEEEEcCCcCChhhhhhcCcceec
Q 003103 564 DGFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 564 ~v~ar~sP~qK--~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.+.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 2334544432 25689999999999999988885544
No 122
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.11 E-value=0.028 Score=56.00 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=57.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|+++|+++.++|+... +...-+..|+.... + ..+.+.+ ..+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f-~-~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF-D-AIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC-c-EEEehhh-------------------cCCCCCC
Confidence 5689999999999999999999997532 34566777774311 0 0010000 1112232
Q ss_pred hHHHHHHHHhhcC---CEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~g---~~V~miGDG~ND~~aLk~AdVG 607 (847)
...+-+.+++.| ..+.|+||..+|+.|-++|++-
T Consensus 144 -p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 -PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222223344333 4588999999999999999873
No 123
>PRK09449 dUMP phosphatase; Provisional
Probab=95.01 E-value=0.048 Score=56.34 Aligned_cols=120 Identities=15% Similarity=0.119 Sum_probs=73.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|+ .|+++.++|+.....+...-++.|+.... + ..+.+.+ .....|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~-------------------~~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQ-------------------VGVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECc-------------------cCCCCCC
Confidence 46899999999999 68999999998888777777777874211 0 0000000 0011232
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCc-CChhhhhhcCcc-eecc-cccH-HHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERK----HICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g----~~V~miGDG~-ND~~aLk~AdVG-Iamg-~g~~-~a~~aaDivl~~~~~~~i~~~i 637 (847)
. .-+-+.+++.| ..+.||||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+.+.+
T Consensus 153 p-~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 V-AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred H-HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 1 22233344333 4689999998 799999999985 3333 2221 1112478877 5577666544
No 124
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=94.96 E-value=0.019 Score=56.23 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=65.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|++++++|+-.........++.|+... . ...+...+. ....|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f-~~i~~~~~~-------------------~~~Kp 134 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-F-DEIISSDDV-------------------GSRKP 134 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-C-SEEEEGGGS-------------------SSSTT
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-c-ccccccchh-------------------hhhhh
Confidence 45689999999999999999999999999999999999998521 1 111111100 00112
Q ss_pred h--hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 572 E--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 572 ~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
+ -=..+.+.+.-....+.|+||..+|..+-++|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 2 11233444433456689999999999999988764
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.80 E-value=0.078 Score=52.58 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=59.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... + ..+.+.+. ...+-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF-D-VVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC-C-EEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557774211 0 00100000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV 606 (847)
-=..+.+.+.-....+.|+||...|+.|-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2223333333345678899999999998888876
No 126
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.76 E-value=0.028 Score=56.08 Aligned_cols=92 Identities=12% Similarity=0.124 Sum_probs=58.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
-++.||+.++++.|++.|+++.++|+- ..+..+-+..|+..-. + ..+ +.+. ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-~-~v~-~~~~------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-D-AIV-DADE------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-C-Eee-ehhh------------------CCCCCC
Confidence 367899999999999999999999986 4566677778874211 0 000 0000 011223
Q ss_pred hhHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 572 EHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 572 ~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
... .+-+.+++. ...+.|+||..+|+.+-++|++.
T Consensus 144 ~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 221 122333333 34578999999999999998874
No 127
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.69 E-value=0.2 Score=48.71 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=65.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCCcccCccccccCCcchHHHHHHh
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~iA~~~---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (847)
+|.+.++++++++++++.|+++..+||.....+. ....++ | ++. ..+..... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-----g~li~~~g------~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-----GPVLLSPD------RLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-----ceEEEcCC------cchhh-hhc
Confidence 4788999999999999999999999999987764 444442 3 321 11110000 00000 000
Q ss_pred cCeEEEeChh-hHHHHHHHHhh-----cCCEEEEEcCCcCChhhhhhcCcc
Q 003103 563 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 563 ~~v~ar~sP~-qK~~iV~~lq~-----~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
.+. .-.|+ .|...++.+++ ....++..||+.+|+.|-++++|-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 112 22343 48888887776 356788899999999998876654
No 128
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.66 E-value=0.082 Score=55.61 Aligned_cols=45 Identities=29% Similarity=0.347 Sum_probs=35.7
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 616 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~ 616 (847)
..|..-|+.|+++ | +.|..+||+.||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4799988888876 2 3467799999999999999999999987666
No 129
>PLN02940 riboflavin kinase
Probab=94.59 E-value=0.047 Score=61.33 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=68.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~-~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+.... + .+.+.+. ..+..|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F-d--~ii~~d~------------------v~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF-S--VIVGGDE------------------VEKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC-C--EEEehhh------------------cCCCCC
Confidence 457999999999999999999999998877766554 56763211 0 0000000 111223
Q ss_pred hhHHHHHHHHhh---cCCEEEEEcCCcCChhhhhhcCccee-cccc--cHHHhhccCEEE
Q 003103 572 EHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARSASDIVL 625 (847)
Q Consensus 572 ~qK~~iV~~lq~---~g~~V~miGDG~ND~~aLk~AdVGIa-mg~g--~~~a~~aaDivl 625 (847)
+. ..+.+.+++ ..+.+.|+||..+|+.|-++|++... +..+ .......+|.++
T Consensus 152 ~p-~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 152 SP-DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred CH-HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 21 222333333 34568999999999999999998633 3332 222334566665
No 130
>PTZ00174 phosphomannomutase; Provisional
Probab=94.48 E-value=0.026 Score=59.44 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=48.3
Q ss_pred EeCh--hhHHHHHHHHhhcCCEEEEEcC----CcCChhhhhhc-CcceecccccHHHhhccCEEE
Q 003103 568 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 625 (847)
Q Consensus 568 r~sP--~qK~~iV~~lq~~g~~V~miGD----G~ND~~aLk~A-dVGIamg~g~~~a~~aaDivl 625 (847)
.+.| -+|..-++.|.+....|+++|| |.||.+||+.| -.|++++++++..|..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4899999999887788999999 99999999987 688888899999988776543
No 131
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.42 E-value=0.15 Score=50.31 Aligned_cols=85 Identities=13% Similarity=0.108 Sum_probs=59.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
..+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... +....
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3577999999999999999999999987 5667777777776310 00112
Q ss_pred hhhHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhhcCcc
Q 003103 571 PEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADIG 607 (847)
Q Consensus 571 P~qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdVG 607 (847)
|... .+-..+++. ...+.|+||.. .|..+-++|++-
T Consensus 92 P~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 3211 222333333 34589999998 799999999883
No 132
>PLN02580 trehalose-phosphatase
Probab=94.21 E-value=0.54 Score=52.23 Aligned_cols=68 Identities=25% Similarity=0.200 Sum_probs=47.8
Q ss_pred EEeChh---hHHHHHHHHhhc-C-----C-EEEEEcCCcCChhhhhh-----cCcceecccccHHHhhccCEEEcCCChh
Q 003103 567 AGVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 631 (847)
Q Consensus 567 ar~sP~---qK~~iV~~lq~~-g-----~-~V~miGDG~ND~~aLk~-----AdVGIamg~g~~~a~~aaDivl~~~~~~ 631 (847)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|++|... ..|++-| ++-.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L--~dp~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSL--RDPS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEc--CCHH
Confidence 355664 898888877654 2 1 35899999999999996 6899999876542 2577887 4455
Q ss_pred hHHHHHH
Q 003103 632 VIISAVL 638 (847)
Q Consensus 632 ~i~~~i~ 638 (847)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 5555443
No 133
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.96 E-value=0.21 Score=49.49 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQ 519 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~ 519 (847)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 56899999999999999999999765
No 134
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.81 E-value=0.065 Score=51.69 Aligned_cols=88 Identities=23% Similarity=0.340 Sum_probs=54.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
..+++.+.++.|++.|+++.++|+-....+....+.. +... .. .+.+.+ . .. ..|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~--~i~~~~-----------------~-~~-~Kp~- 120 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FD--LILGSD-----------------E-FG-AKPE- 120 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-Cc--EEEecC-----------------C-CC-CCcC-
Confidence 3479999999999999999999999888887776664 3211 00 010000 0 01 1221
Q ss_pred HHHHHHHHhhcCC--EEEEEcCCcCChhhhhhcC
Q 003103 574 KYEIVKRLQERKH--ICGMTGDGVNDAPALKKAD 605 (847)
Q Consensus 574 K~~iV~~lq~~g~--~V~miGDG~ND~~aLk~Ad 605 (847)
...+.+.+++.|. .+.|+||..+|..|-++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 1222233333222 6899999999998887764
No 135
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.75 E-value=0.3 Score=51.64 Aligned_cols=86 Identities=14% Similarity=0.107 Sum_probs=57.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
..++-|++.+.++.+++.|+++.++|+-... .+...-++.|+.... .. .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EE-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cc-----------------------eEEe
Confidence 3557899999999999999999999997633 333455667875311 00 1233
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhh
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aL 601 (847)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 3222345555556666667899999999998644
No 136
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.67 E-value=0.13 Score=49.43 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=57.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
++.|++.++++.|++.|+++.++|+.+. .....+.+.+|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4689999999999999999999998652 34455667777641000000 0000000
Q ss_pred HHHHhcCeEEEeChhhHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 558 ELIEKADGFAGVFPEHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
... ..|+-+ .+-+.+++. .+.+.||||...|..+-+.|++-
T Consensus 97 -------~~~-~KP~~~-~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSC-RKPKPG-LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCC-CCCCHH-HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000 123221 222333333 35689999999999998888774
No 137
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.30 E-value=0.83 Score=47.85 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=37.6
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~iA~~~Gi~ 533 (847)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555666788999999999999999999999985544333 455778874
No 138
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.29 E-value=0.21 Score=51.69 Aligned_cols=106 Identities=21% Similarity=0.191 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 493 ~lr~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
|+.|+.++.++.+ ++.|+.+.++|.-|..--..+=+.-|+..... ...+.....+.-....+.... ..-+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPYH--SHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCcc--CCCCCcCC
Confidence 5678999999999 56899999999999888888888888753210 011000000000000000000 01244665
Q ss_pred hh-hHHHHHHHHhhc----C---CEEEEEcCCcCCh-hhhh
Q 003103 571 PE-HKYEIVKRLQER----K---HICGMTGDGVNDA-PALK 602 (847)
Q Consensus 571 P~-qK~~iV~~lq~~----g---~~V~miGDG~ND~-~aLk 602 (847)
|. =|..+++.+++. | ..|.++|||.||- |+++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 53 799999988875 4 6899999999996 4443
No 139
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=93.04 E-value=0.17 Score=53.19 Aligned_cols=67 Identities=19% Similarity=0.183 Sum_probs=48.0
Q ss_pred EEeChhhHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhc--------CcceecccccHHHhhccCEEEcCCChhhHH
Q 003103 567 AGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 567 ar~sP~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~A--------dVGIamg~g~~~a~~aaDivl~~~~~~~i~ 634 (847)
.+..+.+|...++.+.++ ...+.|+||+.||.+|++.+ ..||+++.|. .+..|++++ ++...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~--~~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHL--TGPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeC--CCHHHHH
Confidence 344566888877776554 34689999999999999999 4778885443 356788988 4566655
Q ss_pred HHH
Q 003103 635 SAV 637 (847)
Q Consensus 635 ~~i 637 (847)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 554
No 140
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.84 E-value=0.22 Score=50.50 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=56.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++-|++.++++.|++.|+++.++|+-... .....+..|+.... + ..+...+ +....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-d-~i~~s~~-------------------~~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-D-FVVTSYE-------------------VGAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-c-eEEeecc-------------------cCCCCCC
Confidence 56799999999999999999999976543 45666777773211 0 0000000 0001222
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhhcCc
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI 606 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdV 606 (847)
- .-+-+.+++. ...+.||||+. +|+.+-++|++
T Consensus 163 ~-~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 P-KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred H-HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 1 2223334433 35689999997 89998888775
No 141
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.73 E-value=0.27 Score=54.18 Aligned_cols=97 Identities=12% Similarity=0.064 Sum_probs=57.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchH
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (847)
-++.|++.+++++|++.|+++.++|+- ....+..+.+..|+.-+ ..+.+.... ++
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~---sd--- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP---ED--- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC---cc---
Confidence 467899999999999999999999982 12234455566665310 000000000 00
Q ss_pred HHHHHhcCeEEEeChhhHHHHHHHH-hhc---CCEEEEEcCCcCChhhhhhcCcce
Q 003103 557 DELIEKADGFAGVFPEHKYEIVKRL-QER---KHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 557 ~~~~~~~~v~ar~sP~qK~~iV~~l-q~~---g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
...+| .|+ ..++..+ ++. ...+.||||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00011 232 2333332 222 367899999999999999988853
No 142
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.57 E-value=0.17 Score=49.40 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=56.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~---------------~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
++-|++.+++++|++.|+++.++|.-. ......+.++.|+.- . ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 456899999999999999999999742 334555666677631 0 000000000 00
Q ss_pred HHHHhcCeEEEeChhhHHHHHH-HHhhcC---CEEEEEcCCcCChhhhhhcCccee
Q 003103 558 ELIEKADGFAGVFPEHKYEIVK-RLQERK---HICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~-~lq~~g---~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
. .....|. ..+++ .+++.| ..+.|+||+.+|..+-++|++-..
T Consensus 98 ------~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 0001232 22222 223232 458899999999999999888543
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.45 E-value=0.11 Score=49.92 Aligned_cols=95 Identities=17% Similarity=0.007 Sum_probs=64.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
.-++||++.+.++.|+ .++++.+.|.-+...+..+-+.+|+..... ..+.+.+. +.+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f--~~i~~~~d------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG--YRRLFRDE------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe--eeEEECcc------------------ccccC
Confidence 3457999999999999 579999999999999999988888742110 11111100 11112
Q ss_pred hhhHHHHHHHHhh---cCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 571 PEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 571 P~qK~~iV~~lq~---~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
|. +.+.+++ ....+.|+||..+|..|-++|.|-|..
T Consensus 102 P~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 32 4444443 346789999999999988877666543
No 144
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.16 E-value=0.23 Score=51.08 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=61.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC---CCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~G---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +... ++.... ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--------------------f~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--------------------FSGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--------------------cceEEE-eCccc
Confidence 45789999999999999999999999988766655544432 2110 000000 00111
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1112211233333333335689999999999999999986543
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.83 E-value=0.81 Score=47.10 Aligned_cols=88 Identities=18% Similarity=0.222 Sum_probs=54.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
-|.-|++.++++.+++.|++|+++||..... +..--++.|+... ..+.-.... +. .+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~LiLR~~~----d~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KHLILRGLE----DS------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----CeeeecCCC----CC------------Cc
Confidence 4778999999999999999999999998754 2222345676421 111000000 00 00
Q ss_pred eChhhHHHHHHHHhhcCC-EEEEEcCCcCChh
Q 003103 569 VFPEHKYEIVKRLQERKH-ICGMTGDGVNDAP 599 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~-~V~miGDG~ND~~ 599 (847)
..-+-|.+.=+.+.+.|+ +++.+||-.+|..
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 001226666667776764 6788999988863
No 146
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.65 E-value=1.3 Score=44.41 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=31.7
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.+.+.+.+|+++|++|+.+|.-....-...-+++|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778999999999999999988777777777788875
No 147
>PLN02811 hydrolase
Probab=90.84 E-value=0.44 Score=49.09 Aligned_cols=96 Identities=14% Similarity=0.057 Sum_probs=55.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~-iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.|+++.++||-+...... ..+..|+..- .. ..+.+.+. -+.+..|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-f~-~i~~~~~~-----------------~~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-MH-HVVTGDDP-----------------EVKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-CC-EEEECChh-----------------hccCCCC
Confidence 568999999999999999999999977543322 2222233110 00 00000000 0111122
Q ss_pred hhHHHHHHHHhhc------CCEEEEEcCCcCChhhhhhcCcce
Q 003103 572 EHKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 572 ~qK~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
+- .-+.+++++. ...+.||||...|+.|-++|++-.
T Consensus 139 ~p-~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 139 AP-DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred Cc-HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 21 1222333333 356999999999999999999854
No 148
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=90.76 E-value=0.85 Score=42.60 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 531 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~iA~~~G 531 (847)
++.+++.+.++.|++.|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777766666665
No 149
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=90.61 E-value=0.88 Score=44.49 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=71.5
Q ss_pred HHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCe--EEEEcCC-------CHHHHHH
Q 003103 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 525 (847)
Q Consensus 455 ~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 525 (847)
+.+.|.|.+.+-... ++ ..-=++.+-|+..+.+++|++.+.. |.++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667788888764432 10 0123577889999999999999874 9999986 4788999
Q ss_pred HHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhc-----CCEEEEEcCCc-CChh
Q 003103 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 599 (847)
Q Consensus 526 iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~-----g~~V~miGDG~-ND~~ 599 (847)
+++.+|++- + .+..-.|.-..++.+.++.+ -+.++|+||-. -|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 0 12234676666777877765 55699999974 4554
Q ss_pred h
Q 003103 600 A 600 (847)
Q Consensus 600 a 600 (847)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 4
No 150
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=89.86 E-value=0.81 Score=44.89 Aligned_cols=39 Identities=8% Similarity=0.014 Sum_probs=30.7
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcCCC
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 533 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~------------tA~~iA~~~Gi~ 533 (847)
-||+.++++.|+++|+++.++|.-... ....+-+.+|+.
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999975431 345566777763
No 151
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=89.62 E-value=1.6 Score=54.12 Aligned_cols=67 Identities=7% Similarity=0.063 Sum_probs=44.5
Q ss_pred HHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHH
Q 003103 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGR 528 (847)
Q Consensus 450 ~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~iA~ 528 (847)
...+.|.....|.+++-|.. +++-.....-.+-+++.+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34445555566777665543 23211111235567899999997 77899999999999988777654
Q ss_pred H
Q 003103 529 R 529 (847)
Q Consensus 529 ~ 529 (847)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.24 E-value=0.19 Score=51.41 Aligned_cols=89 Identities=12% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE-
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG- 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar- 568 (847)
-++.|++.+.++.|++.|+++.++|+..... ........++... .+. +++.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~------------------------fd~--v~~s~ 146 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL------------------------FDA--VVESC 146 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh------------------------CCE--EEEee
Confidence 4578999999999999999999999865432 2222222333110 000 1110
Q ss_pred ----eChhhHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 569 ----VFPEHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 569 ----~sP~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
..|+-. -+-..+++. ...+.|+||...|+.+=++|++-
T Consensus 147 ~~~~~KP~p~-~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 147 LEGLRKPDPR-IYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred ecCCCCCCHH-HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 123321 122333333 35588999999999999998884
No 153
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=89.01 E-value=0.24 Score=50.93 Aligned_cols=95 Identities=12% Similarity=0.128 Sum_probs=58.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh-
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 571 (847)
++.|++.++++.| ++++.++|+.....+...=+..|+..... ...+.+.+ ..+-.|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~-~~v~~~~~-------------------~~~~KP~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP-DKLFSGYD-------------------IQRWKPD 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc-ceEeeHHh-------------------cCCCCCC
Confidence 4568999999988 48999999998877777667777743210 00111000 001112
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 572 -~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
+-=....+.+.-....++|+||..+|..+=++|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 111122222222234589999999999999999987653
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=88.90 E-value=2.4 Score=42.63 Aligned_cols=106 Identities=20% Similarity=0.202 Sum_probs=65.4
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCC-------CCC---CCCcccCccccccCCcchHHHHHH
Q 003103 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT-------NMY---PSSSLLGQDKDASIAALPVDELIE 561 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~iA~~~Gi~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 561 (847)
|+-|+..++|+.+++.|- .++++|--|..--..+-+..|+.+ |.. ..+.+.-. ...
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~----pyH--------- 150 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVR----PYH--------- 150 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEee----cCC---------
Confidence 567899999999999997 999999888776666767777632 110 00000000 000
Q ss_pred hcCeEEEeChh-hHHHHHHHHhhcC-------CEEEEEcCCcCCh-hhhhhcCcceecc
Q 003103 562 KADGFAGVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAVA 611 (847)
Q Consensus 562 ~~~v~ar~sP~-qK~~iV~~lq~~g-------~~V~miGDG~ND~-~aLk~AdVGIamg 611 (847)
.-.-+.|+.|. =|..++..++..+ ..+.++|||.||. |.++...--+||-
T Consensus 151 ~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 151 TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 00123444332 3666666555432 2788999999994 7877776667774
No 155
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=88.60 E-value=1.6 Score=55.75 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
.+-||+.+.++.|+++|+++.++|+-....+...-++.|+.....+ ..+... -+.+..|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~-------------------~~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSAD-------------------AFENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECc-------------------ccccCCCC
Confidence 3578999999999999999999999988888888888888411111 011000 01122333
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccc---cHHHhhccCEEEcC
Q 003103 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTE 627 (847)
Q Consensus 573 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g---~~~a~~aaDivl~~ 627 (847)
.. ....+.+.-....+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++.+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22 22233333334568999999999999999998 3334322 23344577888833
No 156
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=88.09 E-value=1.3 Score=48.55 Aligned_cols=91 Identities=11% Similarity=0.065 Sum_probs=66.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~----~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... .+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6653210 0112
Q ss_pred eChhhHHHHHHHH-hhc---CCEEEEEcCCcCChhhhhhcCcceecc
Q 003103 569 VFPEHKYEIVKRL-QER---KHICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 569 ~sP~qK~~iV~~l-q~~---g~~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
..++-|...++.+ ++. -..+.|+||...|..+.+++...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2244455544443 322 367899999999999999998887553
No 157
>PLN03017 trehalose-phosphatase
Probab=88.00 E-value=11 Score=41.86 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=42.1
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCcCChhhhhhc-----CcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~-------g~~V~miGDG~ND~~aLk~A-----dVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+|-..|+.+.+. +..+.++||...|-.|++.. ++||.+|.... ...|++.| ++-+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 888888877653 33688999999999999865 46666774221 24678887 4555665544
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.14 E-value=1.4 Score=44.45 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=53.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+++++|++.+ +.+++|.-+..+....-+.+|+.... +. .. + ..+.++..+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 46889999999999875 56667764444333344555553110 00 00 0 0011221111
Q ss_pred hHHHHH-HHHhhcC-CEEEEEcCCcCChhhhhhc--Ccce
Q 003103 573 HKYEIV-KRLQERK-HICGMTGDGVNDAPALKKA--DIGI 608 (847)
Q Consensus 573 qK~~iV-~~lq~~g-~~V~miGDG~ND~~aLk~A--dVGI 608 (847)
|.+++ ..+++.| ..+.|+||..+|+.|-++| ++-.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 22333 3334344 4577999999999999999 8853
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.54 E-value=1 Score=44.81 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE---e
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---V 569 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar---~ 569 (847)
++.+++.+++++|+ .++.++|+-+...+....++.|+.... + ..+... .+-.+ .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~------------------~~~~~~~~~ 140 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFD------------------TANPDYLLP 140 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEee------------------cccCccCCC
Confidence 36789999999997 479999998888888888888884311 0 000000 00001 1
Q ss_pred ChhhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 570 FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 570 sP~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
.|+.. ..+.+.+......+.|+||...|+.+=++|++-
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 33221 233333433446688999999999988888764
No 160
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=83.68 E-value=2.1 Score=43.15 Aligned_cols=95 Identities=11% Similarity=0.026 Sum_probs=54.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.++++.|++.|+++.++|.-+.......- +..++.... + ..+... -+....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-d-~v~~s~-------------------~~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-D-HIYLSQ-------------------DLGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-C-EEEEec-------------------ccCCCCC
Confidence 46899999999999999999999987655433221 112321100 0 000000 0001123
Q ss_pred hhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce
Q 003103 572 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 572 ~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
+-. ....+.+.-....+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 211 1222333323356889999999999999888843
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=83.26 E-value=2.2 Score=46.59 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=38.9
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA---~~~Gi~ 533 (847)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999977666666 456763
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=81.42 E-value=1.1 Score=40.01 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=35.7
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA---~~~Gi~ 533 (847)
|.+.-.+.+=|++.++|+.|+++|++++.+|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555567788899999999999999999999998755544444 556774
No 163
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.20 E-value=3.6 Score=40.88 Aligned_cols=88 Identities=15% Similarity=0.134 Sum_probs=55.5
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh--HH
Q 003103 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH--KY 575 (847)
Q Consensus 498 ~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q--K~ 575 (847)
..+.++.|++. ++..++||.....+...-++.|+.... + .+.+.+. ..+-.|+. =.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f-d--~i~~~~~------------------~~~~KP~p~~~~ 149 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF-D--AVVAADD------------------VQHHKPAPDTFL 149 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc-e--EEEehhh------------------ccCCCCChHHHH
Confidence 46899999875 899999999999998888888885311 0 1111100 00112222 12
Q ss_pred HHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 576 ~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
...+.++-....+.|+||..+|+.+-++|++-
T Consensus 150 ~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 150 RCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 22333332334578999999999999998874
No 164
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=76.75 E-value=6.3 Score=40.86 Aligned_cols=82 Identities=22% Similarity=0.198 Sum_probs=54.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
++.=|++.+.++.+++.|++|..|||.+.. ....=-++.|.... .. ++-|
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~~-----------------------l~lr 166 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW----DH-----------------------LILR 166 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB----SC-----------------------GEEE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc----ch-----------------------hccc
Confidence 345578999999999999999999997643 22233355675321 11 1222
Q ss_pred e--------ChhhHHHHHHHHhhcC-CEEEEEcCCcCChhh
Q 003103 569 V--------FPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (847)
Q Consensus 569 ~--------sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~a 600 (847)
- ..+-|...-+.+++.| ++++++||-.+|...
T Consensus 167 ~~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 167 PDKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp EESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1 1234777788888885 578889999999875
No 165
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=75.20 E-value=5.8 Score=39.26 Aligned_cols=96 Identities=15% Similarity=0.202 Sum_probs=57.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhc------CeEE
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA------DGFA 567 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~a 567 (847)
+.+++.+++..|+++|.+++|+|.- .||.....+...+. .++ +-+.+.++.. ..+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~------~~~-~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFD------KLH-NKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHH------HHH-HHHHHHHHHcCCccceEEEC
Confidence 4689999999999999999999952 34433222211110 000 0011111111 1244
Q ss_pred EeChhh--------HHHHHHHHhhcC---CEEEEEcCCcCChhhhhhcCcc
Q 003103 568 GVFPEH--------KYEIVKRLQERK---HICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 568 r~sP~q--------K~~iV~~lq~~g---~~V~miGDG~ND~~aLk~AdVG 607 (847)
.-.|++ ...+.+.+++.+ ....||||-..|..+-..|+++
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 444443 345666666655 5678999999999998888887
No 166
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=72.50 E-value=10 Score=39.48 Aligned_cols=90 Identities=11% Similarity=0.065 Sum_probs=52.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++-||+.++++.|++. +++.++|.-+... +..|+.... + .+.+.+ -+.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d--~i~~~~------------------~~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E--FVLRAG------------------PHGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c--eeEecc------------------cCCcCCCc
Confidence 4568999999999975 8999999865431 445653210 0 000000 01112232
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCC-cCChhhhhhcCcceec
Q 003103 573 HKYEIVKRLQER---KHICGMTGDG-VNDAPALKKADIGIAV 610 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG-~ND~~aLk~AdVGIam 610 (847)
-. -+-+.+++. ...+.||||. ..|+.+=++|++-...
T Consensus 166 p~-~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SD-MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HH-HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 21 122233333 3568999999 5999999999875543
No 167
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=70.95 E-value=23 Score=37.38 Aligned_cols=42 Identities=12% Similarity=0.292 Sum_probs=31.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~iA~~~Gi~ 533 (847)
+.|.=|++.+..+.+++.|++|..+||.... |.... ++.|..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCC
Confidence 3566789999999999999999999999853 33333 345664
No 168
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=70.40 E-value=7.5 Score=41.48 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.3
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003103 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (847)
Q Consensus 494 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~ 534 (847)
+| |++.+++++|+++|+++.++|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999888888888889999964
No 169
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=68.63 E-value=26 Score=33.93 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=66.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHc-----CCCCCCCCCCcccCccccccCCcchHHHHHHhc
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~---iA~~~-----Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (847)
|..++++.+..+.+++.|.+++-+|+....-|.. --++. +++. ..+.- +...+-..+. -
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~-----Gpv~~-------sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD-----GPVLL-------SPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC-----CCEEE-------CCcchhhhhh-c
Confidence 7899999999999999999999999998644332 22222 3322 11110 0000111110 1
Q ss_pred CeEEEeChhhHHHHHHHHhhc-----CCEEEEEcCCcCChhhhhhcCcc
Q 003103 564 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 564 ~v~ar~sP~qK~~iV~~lq~~-----g~~V~miGDG~ND~~aLk~AdVG 607 (847)
.+..+-.-+.|....+.++.. ...++..|...+|+.|-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 134454557899999988864 45677888888999999877664
No 170
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=68.60 E-value=1.1e+02 Score=38.61 Aligned_cols=271 Identities=16% Similarity=0.095 Sum_probs=148.8
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 003103 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (847)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~ 96 (847)
..+-++.+|..+++... .+.+..++-.....+ ++.+|..-+...+...-.+...+....... .
T Consensus 41 ~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~ 104 (917)
T COG0474 41 PTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKK------------FLRQFKDPFIILLLVAALLSAFVGDWVDAG----V 104 (917)
T ss_pred cccCCCHHHHHHHHhhcCCccccccccCcHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcccccC----c
Confidence 35567778888888743 444544333333333 333344333333333333334443332110 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC------eEEE----EECCeEEEEeCCCCCCCcEEEEcCCCe
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP------KTKV----LRDGRWSEQDASILVPGDVISIKLGDI 166 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~------~~~V----~rdg~~~~I~~~~Lv~GDiV~l~~G~~ 166 (847)
++...+.++++..+......++..++-++++++...... ...+ +.-|....+...|.+|-|...++..+
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~- 183 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD- 183 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-
Confidence 344444455555555588888888888888777654432 2222 24588899999999999999999877
Q ss_pred eccceEEEeeCceEEEeccc--cCCCceee---c---CCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCC
Q 003103 167 VPADARLLEGDPLKIDQSAL--TGESLPVT---K---NPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238 (847)
Q Consensus 167 vPaD~~ll~g~~~~Vdes~L--TGEs~pv~---K---~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 238 (847)
.=+|=-.|.|++.-|+-... ++|..|.. + -.|..+.+|+-..--..+|.-+.-|..+..-+-.+.. .+.-.
T Consensus 184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~-~t~l~ 262 (917)
T COG0474 184 LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEV-KTPLQ 262 (917)
T ss_pred ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcccccc-CCcHH
Confidence 45555556665433332211 22333332 3 3577788887544444555566667666543322112 22212
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 003103 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (847)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~ 306 (847)
..+.+....+..+.++..++..+...+.........+..++..+++++--+.|..+-+++.++...-+
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 23455555555554444333333333321221234566777778888888888888888888766533
No 171
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=68.40 E-value=8.3 Score=41.16 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.1
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003103 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (847)
Q Consensus 494 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~ 534 (847)
+| |++.+++++|+++|+++.++|+-+...+....++.|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999777777788999999963
No 172
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=68.33 E-value=9.7 Score=40.23 Aligned_cols=118 Identities=15% Similarity=0.162 Sum_probs=64.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHH---h--cCeEEEeC
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE---K--ADGFAGVF 570 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~v~ar~s 570 (847)
++..++++.|++.+....+.|+.............|+. .+-..+. . ..++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 57788999999999999999886643222211111110 0111111 0 01122223
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcc-eeccccc---H---HHhhccCEEEcCCChhhHHHH
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVADAT---D---AARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVG-Iamg~g~---~---~a~~aaDivl~~~~~~~i~~~ 636 (847)
|+-=....+.+.-....+.|+||.. +|..+-+.+++- +.+..|. + .....+|+++ +++..+.+.
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3322233344433346799999996 899999988874 3333332 1 1223467777 567666654
No 173
>PRK10444 UMP phosphatase; Provisional
Probab=68.19 E-value=5.3 Score=42.01 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=39.7
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~ 530 (847)
|.+.-.+.+-|++.++++.|++.|++++.+||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999988887777765
No 174
>PLN02151 trehalose-phosphatase
Probab=67.09 E-value=83 Score=34.83 Aligned_cols=61 Identities=20% Similarity=0.196 Sum_probs=41.7
Q ss_pred hHHHHHHHHhhc-C------CEEEEEcCCcCChhhhhhc-----CcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~-g------~~V~miGDG~ND~~aLk~A-----dVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+|-..|+.+.+. + ..+.++||-..|-.|++.. ++||-+|.+.. ...|++.| ++-+.+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L--~dp~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSL--QEPDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeC--CCHHHHHHHH
Confidence 888888877654 2 2489999999999998853 56677764321 23678888 4455555544
No 175
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=66.63 E-value=6.9 Score=41.34 Aligned_cols=48 Identities=27% Similarity=0.368 Sum_probs=36.6
Q ss_pred EEecccCC----CCcchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHHcCCC
Q 003103 486 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIG---KETGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D~----lr~~~~~~I~~l~~aGI~v~miTGD~~~tA---~~iA~~~Gi~ 533 (847)
|.+.-.+. +=|++.++|++|++.|+++.++||....+. ....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555565 788999999999999999999999776653 3334556763
No 176
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=65.83 E-value=4.1 Score=39.76 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=37.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.=..||++.+.+++|++. .++++.|-.....|..+.+.++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 335799999999999987 999999999999999999988863
No 177
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=65.14 E-value=11 Score=39.52 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=38.5
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~iA~~~Gi~ 533 (847)
|.+.-.+.+=+++.++|++|++.|++++++|| ..+.......+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555667778999999999999999999997 5566666677778874
No 178
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=64.53 E-value=13 Score=37.27 Aligned_cols=51 Identities=25% Similarity=0.370 Sum_probs=42.7
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HcCCC
Q 003103 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMG 533 (847)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~---~~Gi~ 533 (847)
.+-|.+.++|..-|++.++++.||+++.+|.-+|.-..+.-+.+.+ ++|+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 5679999999999999999999999999999999877666555554 45663
No 179
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=64.28 E-value=22 Score=41.28 Aligned_cols=98 Identities=16% Similarity=0.054 Sum_probs=61.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCC------CCcccCccccccCCcchHHHHHHhcCeE
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYP------SSSLLGQDKDASIAALPVDELIEKADGF 566 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~-~Gi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (847)
+++++.+ .+++.|. ++++|+=....+..+|++ +|++.-... .+.++|.-.. .
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----~------------ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----P------------ 169 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----C------------
Confidence 5666555 4456775 499999999999999987 898531110 0111111000 0
Q ss_pred EEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 567 ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
..+.=++|.+-++..........+-||..||.|+|+.||-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0123456877776433211223689999999999999999999985
No 180
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=62.53 E-value=73 Score=40.48 Aligned_cols=201 Identities=13% Similarity=0.101 Sum_probs=95.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCe-EEE----EECCeEEEEeCCCCCCCcEEEEcCCCeec
Q 003103 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMANL-----APK-TKV----LRDGRWSEQDASILVPGDVISIKLGDIVP 168 (847)
Q Consensus 99 ~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~-----~~~-~~V----~rdg~~~~I~~~~Lv~GDiV~l~~G~~vP 168 (847)
...+++++.++++.+-++.++++.++..+...+.. ..+ ..+ +.-|....+...|.+|.|.+.++. +..=
T Consensus 133 ~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g-~~l~ 211 (941)
T TIGR01517 133 AILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG-LSLE 211 (941)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc-CcEE
Confidence 33445556667777777777766665443332211 111 222 235888999999999999999864 3344
Q ss_pred cceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCCCchHHHHHHH
Q 003103 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (847)
Q Consensus 169 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~ 248 (847)
+|=-.+.|++.-|+-. .|+..- -..|..+..|+-..-=...|.=+.-|.-... +...-..+.-...+.+..+.+
T Consensus 212 VdES~LTGES~pv~K~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~ 285 (941)
T TIGR01517 212 IDESSITGESDPIKKG--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLI 285 (941)
T ss_pred EEecccCCCCCccccc--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHH
Confidence 5555555544333221 122221 2345556666532221222222222321111 001011111112233333344
Q ss_pred HHHHH---HHHHHHHHHHHHhh------------hhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 003103 249 GNFCI---CSIAVGIVAEIIIM------------YPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (847)
Q Consensus 249 ~~~~~---~~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~ 306 (847)
..+.+ +++++..++.+++. .......+..++...++.+-.++|.+.++++..+....+
T Consensus 286 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 286 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 33321 11111111111110 011233455666677777788888888888888875544
No 181
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=60.81 E-value=19 Score=37.05 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=67.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|+.+.+.|+-....+..+.+..|+..... ..+.+.+. .-.+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~--~~v~~~dv-----------------~~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD--VIVTADDV-----------------ARGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc--hhccHHHH-----------------hcCCCCC
Confidence 4778999999999999999999999999888999999999854211 01111100 0012223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
+-=..-.+.|.-....+..+.|..|.+.|-++|+.-+-
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 33233333333345568899999999999999987543
No 182
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=60.41 E-value=1.4e+02 Score=36.92 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=22.2
Q ss_pred CCcEEEEcCCCeeccceEEEe-eCceEEEeccccCCC
Q 003103 155 PGDVISIKLGDIVPADARLLE-GDPLKIDQSALTGES 190 (847)
Q Consensus 155 ~GDiV~l~~G~~vPaD~~ll~-g~~~~Vdes~LTGEs 190 (847)
-|....+...|.+|-|.++++ |+.+-+|=-.+.|+.
T Consensus 99 dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~ 135 (755)
T TIGR01647 99 DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY 135 (755)
T ss_pred CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc
Confidence 366667777777777777774 333445555555553
No 183
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=59.88 E-value=11 Score=36.74 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=49.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.++++ ++.++|.-+.......-++.|+... ++.++.... .....|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~--------------------fd~v~~~~~-~~~~KP~ 141 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWY--------------------FDRAFSVDT-VRAYKPD 141 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHH--------------------HhhhccHhh-cCCCCCC
Confidence 57889999998 3678898888877777888887421 111100000 1111233
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhc
Q 003103 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (847)
Q Consensus 573 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~A 604 (847)
-. ....+.+.-....+.||||...|+.+-+++
T Consensus 142 p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 22 233333333345689999999998876653
No 184
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=59.84 E-value=9.9 Score=36.93 Aligned_cols=90 Identities=26% Similarity=0.362 Sum_probs=61.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (847)
|++-+++.|..-++.|=++..+||..+. ++...|+...|.. ..+ .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~-m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITN-MNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCC-Ccc-------------------------eeeccC
Confidence 5667788999999999999999998763 4556666666632 111 134444
Q ss_pred Chh-hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceec
Q 003103 570 FPE-HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (847)
Q Consensus 570 sP~-qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam 610 (847)
.|. .+..-...+|+++-. ..-||.-||..|-|+|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~~~-IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKNIR-IHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcCce-EEecCCchhhhHHHhcCccceeE
Confidence 331 112234566767644 488999999999999987 6654
No 185
>PLN02423 phosphomannomutase
Probab=58.21 E-value=13 Score=38.95 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=34.1
Q ss_pred hhHHHHHHHHhhcCCEEEEEcC----CcCChhhhhh-cCcceeccc
Q 003103 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKK-ADIGIAVAD 612 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGD----G~ND~~aLk~-AdVGIamg~ 612 (847)
-+|..-++.|+ ...-|++.|| |.||.+||+. -=.|+.+.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 47999999999 6678899999 8999999997 666888854
No 186
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=56.32 E-value=34 Score=39.99 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=31.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcCCC
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 533 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~iA~~~Gi~ 533 (847)
+-|+++++++.|++.|++++++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999997433 3456667777763
No 187
>PTZ00445 p36-lilke protein; Provisional
Probab=55.15 E-value=26 Score=35.59 Aligned_cols=63 Identities=13% Similarity=0.141 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEE--EecccC----------CCCcchHHHHHHHHhCCCeE
Q 003103 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG--LLPLFD----------PPRHDSAETIRRALNLGVNV 512 (847)
Q Consensus 445 ~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG--~i~~~D----------~lr~~~~~~I~~l~~aGI~v 512 (847)
.+..+..++.+.+.|.|++++-... ++++ .=|.-+ .++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3445556677889999999875532 3332 001222 37999999999999999999
Q ss_pred EEEcCCCH
Q 003103 513 KMITGDQL 520 (847)
Q Consensus 513 ~miTGD~~ 520 (847)
.++|=-..
T Consensus 95 ~VVTfSd~ 102 (219)
T PTZ00445 95 SVVTFSDK 102 (219)
T ss_pred EEEEccch
Confidence 99995443
No 188
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=53.88 E-value=36 Score=34.67 Aligned_cols=119 Identities=14% Similarity=0.191 Sum_probs=68.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++-+++.++++.+++. .++.++|.-....+....+++|+.... +.-... .-+....|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~F-d~v~~s--------------------~~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYF-DAVFIS--------------------EDVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhh-heEEEe--------------------cccccCCCC
Confidence 4567888999999888 899999987777778888899974311 100000 012233443
Q ss_pred hHHHHHHHHhhcC---CEEEEEcCCc-CChhhhhhcCc-ceecc-ccc---HHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERK---HICGMTGDGV-NDAPALKKADI-GIAVA-DAT---DAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g---~~V~miGDG~-ND~~aLk~AdV-GIamg-~g~---~~a~~aaDivl~~~~~~~i~~~i 637 (847)
. .-.-..+++.| ..+.||||.. ||+.+-++++. +|-+. .+. +.. ...|..+ .++..+...+
T Consensus 157 ~-~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 157 P-EIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEI--SSLAELLDLL 226 (229)
T ss_pred c-HHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEE--cCHHHHHHHH
Confidence 3 33344455444 4699999975 78444445544 33343 221 122 4556555 4455555544
No 189
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=52.68 E-value=16 Score=34.01 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 522 (847)
+++.+++.++++++++.|++++.+||.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6688999999999999999999999998654
No 190
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=52.12 E-value=62 Score=31.88 Aligned_cols=106 Identities=18% Similarity=0.139 Sum_probs=65.1
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHH-HHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHH
Q 003103 497 DSAETIRRALNLGVNVKMITGDQLAI-GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (847)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~t-A~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~ 575 (847)
|.-++++++++.|-++.+++=.+... ...+.+-+|+. ...+.=-+|++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 44555666665666666666555432 44444545442 2245555788888
Q ss_pred HHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh-hccCEEEcCCChhhHHHHHHHHHHHHHHHHH
Q 003103 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-SASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649 (847)
Q Consensus 576 ~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~-~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~ 649 (847)
..++.+++.|.. +.+|++. ..+.|+ .--..++...+-.++..++.+++++.+..++
T Consensus 116 ~~i~~~~~~G~~-viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGVD-VIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCc-EEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 889999999954 4777752 123333 2344678888899999999999999887764
No 191
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=49.81 E-value=16 Score=33.45 Aligned_cols=80 Identities=20% Similarity=0.199 Sum_probs=45.4
Q ss_pred HHHHHHHHccCeEEEEEeeecC--CC-CC---CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCe-EEEEcCCCHHH
Q 003103 450 AVIDKFAERGLRSLGVARQEIP--EK-TK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLAI 522 (847)
Q Consensus 450 ~~~~~~~~~G~rvl~~a~~~~~--~~-~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~-v~miTGD~~~t 522 (847)
..++.+.+.|+++..+.-+.-+ .. .. ++...+..++=+ --+.+.+.+.+++|.+.|++ +|+.+|.....
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv----~~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~ 93 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVV----CVPPDKVPEIVDEAAALGVKAVWLQPGAESEE 93 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-----S-HHHHHHHHHHHHHHT-SEEEE-TTS--HH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEE----EcCHHHHHHHHHHHHHcCCCEEEEEcchHHHH
Confidence 3456666689998887544311 00 00 101111121111 12345788999999999997 99999999999
Q ss_pred HHHHHHHcCCC
Q 003103 523 GKETGRRLGMG 533 (847)
Q Consensus 523 A~~iA~~~Gi~ 533 (847)
+...|++.|+.
T Consensus 94 ~~~~a~~~gi~ 104 (116)
T PF13380_consen 94 LIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHTT-E
T ss_pred HHHHHHHcCCE
Confidence 99999999873
No 192
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=49.73 E-value=13 Score=24.59 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=13.3
Q ss_pred CCCCCHHHHHHHHhh
Q 003103 35 REGLTSDEGAHRLHV 49 (847)
Q Consensus 35 ~~GLs~~e~~~r~~~ 49 (847)
++|||.+|+.+|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 679999999999975
No 193
>PTZ00174 phosphomannomutase; Provisional
Probab=49.68 E-value=25 Score=36.85 Aligned_cols=41 Identities=20% Similarity=0.305 Sum_probs=32.4
Q ss_pred EEecccC-CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 003103 486 GLLPLFD-PPRHDSAETIRRALNLGVNVKMITGDQLAIGKET 526 (847)
Q Consensus 486 G~i~~~D-~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i 526 (847)
|.+.=.| ++.+.+.++|+++++.|+++++.||.+.......
T Consensus 14 GTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~ 55 (247)
T PTZ00174 14 GTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQ 55 (247)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 3343343 4788999999999999999999999998755443
No 194
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=48.24 E-value=3.1e+02 Score=34.67 Aligned_cols=194 Identities=12% Similarity=0.007 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC-----CeEEEE-----ECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCc
Q 003103 109 VINSTISFIEENNAGNAAAALMANLA-----PKTKVL-----RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (847)
Q Consensus 109 ~~~~~~~~~~e~~~~~~~~~l~~~~~-----~~~~V~-----rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~ 178 (847)
.+...+..+...++-+++.++..... .+...+ .-|....+..-|.+|-|.+.++..+ .=+|=-.+.|++
T Consensus 94 ~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~LTGES 172 (884)
T TIGR01522 94 VTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD-LSIDESNLTGET 172 (884)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc-eEEEcccccCCC
Confidence 33444445566667667776643222 122222 2478889999999999999987532 335555555554
Q ss_pred eEEEeccc--cCCC-ce--e---ecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhc-cCCCCchHHHHHHHH
Q 003103 179 LKIDQSAL--TGES-LP--V---TKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIG 249 (847)
Q Consensus 179 ~~Vdes~L--TGEs-~p--v---~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~-~~~~~~~~~~~~~~~ 249 (847)
.-|+-..- .++. .+ - .-..|..+.+|+-..-=...|.=+.-|.-... +.+.... +.-...+++....+.
T Consensus 173 ~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~~~~~kt~lq~~l~~l~~~~~ 250 (884)
T TIGR01522 173 TPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM--MQAIEKPKTPLQKSMDLLGKQLS 250 (884)
T ss_pred cceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH--hccCCCCCCcHHHHHHHHHHHHH
Confidence 33332211 1110 00 0 12356677777643322223333333432111 1111111 221223455555555
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 003103 250 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (847)
Q Consensus 250 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~ 306 (847)
...+.++++.+++.++... .....+..++...++.+-.++|.++++++..+....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 251 LVSFGVIGVICLVGWFQGK-DWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 4433222222233233221 1223445566677777888999999999998876544
No 195
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=47.88 E-value=15 Score=31.35 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=16.9
Q ss_pred EeCCCCCCCcEEEE-cCCCeecc
Q 003103 148 QDASILVPGDVISI-KLGDIVPA 169 (847)
Q Consensus 148 I~~~~Lv~GDiV~l-~~G~~vPa 169 (847)
+.-.+|.+||.|.+ ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 44578999999999 79999996
No 196
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=47.11 E-value=33 Score=40.70 Aligned_cols=71 Identities=24% Similarity=0.289 Sum_probs=47.1
Q ss_pred EeCCCCCCCcEEEE-cCCCeecc-ceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHh
Q 003103 148 QDASILVPGDVISI-KLGDIVPA-DARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF 225 (847)
Q Consensus 148 I~~~~Lv~GDiV~l-~~G~~vPa-D~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~ 225 (847)
|.-.+|.+||-|.| ++||+||- ++++.+ -=+|+..|.. -|..+..+||.+...+..+..-.++..+.-
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e---------~R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~~C~ 432 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLE---------KRPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGLNCP 432 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeecc---------cCCCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCCCCh
Confidence 44588999999999 79999995 333333 3355555544 566667889999986655555556644333
Q ss_pred hhH
Q 003103 226 GKA 228 (847)
Q Consensus 226 g~i 228 (847)
++.
T Consensus 433 aq~ 435 (667)
T COG0272 433 AQL 435 (667)
T ss_pred HHH
Confidence 433
No 197
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=46.43 E-value=2.3e+02 Score=26.13 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=28.2
Q ss_pred EEEeChhhHHHHHHHHhhcCCEEEEEcCCcC--ChhhhhhcCcceecc
Q 003103 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVA 611 (847)
Q Consensus 566 ~ar~sP~qK~~iV~~lq~~g~~V~miGDG~N--D~~aLk~AdVGIamg 611 (847)
+++..+.=-.++++.+. +=+.+...|-|.| |..++++-+|-++-.
T Consensus 43 i~~~~~~~~~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 43 IVGSGTPLTAEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EESTTSTBSHHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEcCCCCcCHHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 34444422244556663 3357889999998 788888888888764
No 198
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=44.84 E-value=3.9e+02 Score=27.94 Aligned_cols=51 Identities=22% Similarity=0.227 Sum_probs=41.6
Q ss_pred CCCceEEEEecccCCCCcchHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHH
Q 003103 479 GAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (847)
Q Consensus 479 e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~iA~~ 529 (847)
..++.=+=+++=.+.+-||..++++.++.. |..|+-.+-|++..|++++.-
T Consensus 90 ~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 90 GTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 445555666776777899999999999999 999997778889999888754
No 199
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=44.37 E-value=3.2e+02 Score=29.82 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=42.3
Q ss_pred CCCCceEEEEecccCCCCcchHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHH
Q 003103 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (847)
Q Consensus 478 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~iA~~ 529 (847)
...++.=+=+++=...+-||..++++.++.. |..|...+-|++.+|++++.-
T Consensus 163 ~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 163 GGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred cCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 3455666667776677889999999999999 999988888999999888753
No 200
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=44.27 E-value=25 Score=37.26 Aligned_cols=47 Identities=23% Similarity=0.235 Sum_probs=39.7
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003103 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (847)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~ 530 (847)
+=|.+.--+.+=|++.++|+.|+++|++++.+|.-...+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34788888899999999999999999999999998877776555543
No 201
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=44.23 E-value=1e+02 Score=32.68 Aligned_cols=30 Identities=7% Similarity=0.165 Sum_probs=19.8
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChhh
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPA 600 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~a 600 (847)
|++=.++++.+++.-..-.++|=|+|+..-
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 445567777777764444567999996543
No 202
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=44.12 E-value=6.8e+02 Score=31.58 Aligned_cols=222 Identities=12% Similarity=0.060 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC------------eEEE----EECCeEEEEeCCCCCCCcEEEEcCCC
Q 003103 102 VGIIVLLVINSTISFIEENNAGNAAAALMANLAP------------KTKV----LRDGRWSEQDASILVPGDVISIKLGD 165 (847)
Q Consensus 102 ~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~------------~~~V----~rdg~~~~I~~~~Lv~GDiV~l~~G~ 165 (847)
+++++..+++...++.. .++-++++++...... ...| +.-|....+..-|.+|-|.+.++ |+
T Consensus 96 ~iv~~~~~i~~~~e~~a-~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g~ 173 (867)
T TIGR01524 96 LMVLASGLLGFIQESRA-ERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-AR 173 (867)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-cC
Confidence 33444455555555544 4676677776443221 1222 23478899999999999999887 43
Q ss_pred eeccceEEEeeCceEEEecccc--CCCcee-----ecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhcc-CC
Q 003103 166 IVPADARLLEGDPLKIDQSALT--GESLPV-----TKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 237 (847)
Q Consensus 166 ~vPaD~~ll~g~~~~Vdes~LT--GEs~pv-----~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~ 237 (847)
-+=+|=-.+.|++.-|+-..-+ .+..|. .-..|..+.+|+-..-=...|.=+..|.-.. .+.. .+.. .-
T Consensus 174 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~-~~~~t~l 250 (867)
T TIGR01524 174 DLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI--AATE-RRGQTAF 250 (867)
T ss_pred ceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH--HhhC-CCCCCcH
Confidence 3455766666655433332211 011111 1246778888865443333333334443221 1212 2222 21
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHH------------
Q 003103 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG------------ 305 (847)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~------------ 305 (847)
...+++....+..+.++...+.+++..+.. ......+..++..+++.+-.+.|.++++++..+....
T Consensus 251 q~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~a 329 (867)
T TIGR01524 251 DKGVKSVSKLLIRFMLVMVPVVLMINGLMK-GDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSA 329 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheehHHHhc-CCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchh
Confidence 123344444444443322222222221111 1123345566777788888889999999988876433
Q ss_pred HHHhhcCCceeccchhhhhcCCeE
Q 003103 306 SHRLSQQGAITKRMTAIEEMAGMD 329 (847)
Q Consensus 306 ~~~l~~~~ilvk~~~~~e~lg~v~ 329 (847)
...|.+-+++|-+-.--=+-++.+
T Consensus 330 iE~lg~v~vic~DKTGTLT~~~m~ 353 (867)
T TIGR01524 330 IQNFGAMDILCTDKTGTLTQDKIE 353 (867)
T ss_pred hhhccCccEEEecCCCccccCeEE
Confidence 244444556665544333334433
No 203
>PRK00208 thiG thiazole synthase; Reviewed
Probab=43.72 E-value=4.1e+02 Score=27.84 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=41.6
Q ss_pred CCCCceEEEEecccCCCCcchHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHH
Q 003103 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (847)
Q Consensus 478 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~iA~~ 529 (847)
.+.++.=+=+++=.+.+-||..++++.++.. |..|+-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 89 LGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred hCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3456666667777777899999999999999 999996777888888887753
No 204
>PLN02591 tryptophan synthase
Probab=43.18 E-value=1.3e+02 Score=31.72 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCh
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDA 598 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~ 598 (847)
|++=.+.++.+|+....-.++|-|+++.
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKP 201 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCH
Confidence 5555677888887655666789999844
No 205
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=42.24 E-value=73 Score=33.26 Aligned_cols=129 Identities=15% Similarity=0.147 Sum_probs=65.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCcccc-------ccCCcchHHHHHHhcC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD-------ASIAALPVDELIEKAD 564 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 564 (847)
-.+|+++.+.++.|++.+|.+.+.|+-=-.....+=++.|...+ .-.+..+-.. ....++ +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~---Nv~VvSN~M~Fd~~g~l~gF~~~-l-------- 156 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHP---NVKVVSNFMDFDEDGVLVGFKGP-L-------- 156 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BT---TEEEEEE-EEE-TTSBEEEE-SS----------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCC---CeEEEeeeEEECCcceEeecCCC-c--------
Confidence 45799999999999999999999997665555666666665321 1111111000 000000 0
Q ss_pred eEEEeChhhHHH-------HHHHHhhcCCEEEEEcCCcCChhhhhhc---Ccceecc--cc-cH----HHhhccCEEEcC
Q 003103 565 GFAGVFPEHKYE-------IVKRLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-TD----AARSASDIVLTE 627 (847)
Q Consensus 565 v~ar~sP~qK~~-------iV~~lq~~g~~V~miGDG~ND~~aLk~A---dVGIamg--~g-~~----~a~~aaDivl~~ 627 (847)
.-+-.|-. .-+.++. ...|...||..-|+.|-.-. +.-+.+| +. .+ .=+++=|+||.+
T Consensus 157 ----IH~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~ 231 (246)
T PF05822_consen 157 ----IHTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVD 231 (246)
T ss_dssp ------TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET
T ss_pred ----eEEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEEC
Confidence 00111111 1223333 34688999999999998655 3444445 32 22 235688999998
Q ss_pred CChhhHHHHH
Q 003103 628 PGLSVIISAV 637 (847)
Q Consensus 628 ~~~~~i~~~i 637 (847)
|.=-.++..|
T Consensus 232 D~tm~v~~~i 241 (246)
T PF05822_consen 232 DQTMDVPNAI 241 (246)
T ss_dssp --B-HHHHHH
T ss_pred CCCchHHHHH
Confidence 8644455444
No 206
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=41.90 E-value=8.3e+02 Score=30.96 Aligned_cols=160 Identities=13% Similarity=0.029 Sum_probs=80.6
Q ss_pred ECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEecccc---CCCcee----ecCCCCccccceeeeeceEE
Q 003103 141 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT---GESLPV----TKNPYDEVFSGSTCKQGEIE 213 (847)
Q Consensus 141 rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LT---GEs~pv----~K~~~~~v~~Gt~v~~G~~~ 213 (847)
.-|....+..-|.+|-|.+.++. +-+=+|=-.+.|++.-|+-..-+ .+..+. .-..|..+.+|+-..-=...
T Consensus 184 vpGDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~at 262 (902)
T PRK10517 184 VPGDIIKLAAGDMIPADLRILQA-RDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIAT 262 (902)
T ss_pred CCCCEEEECCCCEEeeeEEEEEc-CceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEe
Confidence 35788999999999999988863 33445666666654434332211 011111 12467888888754433333
Q ss_pred EEEEeccchhHhhhHHHhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcC
Q 003103 214 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (847)
Q Consensus 214 ~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 292 (847)
|.=+..|.-.. .+.+.-... .-....++....+..+.++...+.+++..+.. ......+..++..+++..-.+.|.
T Consensus 263 G~~T~~GkI~~--~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~-~~~~~~l~~alsv~V~~~Pe~LP~ 339 (902)
T PRK10517 263 GANTWFGQLAG--RVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK-GDWWEAALFALSVAVGLTPEMLPM 339 (902)
T ss_pred ccccHHHHHHH--HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc-CCHHHHHHHHHHHHHHHcccHHHH
Confidence 33344443221 121222222 11122344444444332222222222211111 112234455666777788888899
Q ss_pred chhHHHHHHHHH
Q 003103 293 AMPTVLSVTMAI 304 (847)
Q Consensus 293 ~L~~~~~~~~~~ 304 (847)
.+++++..+...
T Consensus 340 ~vt~~la~g~~~ 351 (902)
T PRK10517 340 IVTSTLARGAVK 351 (902)
T ss_pred HHHHHHHHHHHH
Confidence 888888887543
No 207
>COG5547 Small integral membrane protein [Function unknown]
Probab=41.30 E-value=1.3e+02 Score=23.55 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=28.4
Q ss_pred HHHHHHhHHH--HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 003103 66 FLGFMWNPLS--WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNA 122 (847)
Q Consensus 66 ~~~~~~~~~~--~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~ 122 (847)
+++++.-|.. ++.++.|++-+.++ -| -.+.+++++.+...++.+.+++.
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fw-Ktilviil~~lGv~iGl~~~r~g 53 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FW-KTILVIILILLGVYIGLYKKRTG 53 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HH-HHHHHHHHHHHHHHHHHHHHhhh
Confidence 5677777765 23333344433332 33 34555667778888888877653
No 208
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=40.71 E-value=28 Score=37.22 Aligned_cols=48 Identities=23% Similarity=0.236 Sum_probs=35.4
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~---iA~~~Gi~ 533 (847)
|.+.-.+.+=|++.++|++|++.|+++..+||....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4555567777899999999999999999999976433323 22557764
No 209
>PRK11507 ribosome-associated protein; Provisional
Probab=40.13 E-value=34 Score=28.12 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=23.0
Q ss_pred EEEECCeEEEEeCCCCCCCcEEEEcC
Q 003103 138 KVLRDGRWSEQDASILVPGDVISIKL 163 (847)
Q Consensus 138 ~V~rdg~~~~I~~~~Lv~GDiV~l~~ 163 (847)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57889999999999999999999854
No 210
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=40.03 E-value=7.3e+02 Score=31.47 Aligned_cols=196 Identities=13% Similarity=0.042 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------------CeEEE----EECCeEEEEeCCCCCCCcEEEEcCCCe
Q 003103 103 GIIVLLVINSTISFIEENNAGNAAAALMANLA------------PKTKV----LRDGRWSEQDASILVPGDVISIKLGDI 166 (847)
Q Consensus 103 ~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~------------~~~~V----~rdg~~~~I~~~~Lv~GDiV~l~~G~~ 166 (847)
.++++..+...+..+...++.+++.++..... ....| +.-|....+..-|.+|-|.+.++.+ -
T Consensus 119 ~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~-~ 197 (903)
T PRK15122 119 TMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR-D 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC-c
Confidence 34444445555555666677667777643221 11222 2358889999999999999988743 3
Q ss_pred eccceEEEeeCceEEEeccc------------cCCCce-----eecCCCCccccceeeeeceEEEEEEeccchhHhhhHH
Q 003103 167 VPADARLLEGDPLKIDQSAL------------TGESLP-----VTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 229 (847)
Q Consensus 167 vPaD~~ll~g~~~~Vdes~L------------TGEs~p-----v~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~ 229 (847)
+=+|=-.+.|++.-|+-... .++..+ -.-..|..+.+|+-..-=...|.=+..|.-... +.
T Consensus 198 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~--v~ 275 (903)
T PRK15122 198 LFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKS--IV 275 (903)
T ss_pred eEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHH--hc
Confidence 44565556665544443321 122111 123557777778754433333333333332221 11
Q ss_pred HhhhccC----CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 003103 230 HLVDSTN----QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (847)
Q Consensus 230 ~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~ 305 (847)
. -+... +...+.+.+..++.++..++++ +..+. .......+..++..++...-.++|..+++++..+....
T Consensus 276 ~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~---~~~~~-~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m 350 (903)
T PRK15122 276 G-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL---INGFT-KGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM 350 (903)
T ss_pred C-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh---hhhhc-cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 1 11111 1123445555544333222221 11111 11123345556777788888889999998888876443
Q ss_pred H
Q 003103 306 S 306 (847)
Q Consensus 306 ~ 306 (847)
+
T Consensus 351 a 351 (903)
T PRK15122 351 A 351 (903)
T ss_pred H
Confidence 3
No 211
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.56 E-value=1.1e+02 Score=32.99 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=31.5
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------GKETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~iA~~~Gi~~ 534 (847)
+.++++++.++.++.+++. |++ ..++-||++.. ....|+++||..
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~ 64 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMAS 64 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888999999876 776 35556887653 345677888853
No 212
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=39.21 E-value=1.6e+02 Score=34.38 Aligned_cols=148 Identities=18% Similarity=0.154 Sum_probs=84.9
Q ss_pred ECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceE--------
Q 003103 141 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEI-------- 212 (847)
Q Consensus 141 rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~-------- 212 (847)
+-|....+...|.+|-|.+.++. ..=+|--.+.|++.-+.-.. |+. ...|..++.|+....-..
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 45888999999999999998866 45556666677554333321 443 256778888887654222
Q ss_pred -EEEEEeccchhHhhhHHHhhhccCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHhhhh--ccccchHhHHHHHHHHHHH
Q 003103 213 -EAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL-TAIGNFCICSIAVGIVAEIIIMYP--VQHRKYRDGIDNLLVLLIG 288 (847)
Q Consensus 213 -~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~ 288 (847)
.+.++++|.+|. ..-.....+.. ..+..+.+.+.++.++......+. .....+..++...+...-+
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 233445555542 11011222332 333333322222222222222221 1234566777788888889
Q ss_pred hhcCchhHHHHHHHHHHH
Q 003103 289 GIPIAMPTVLSVTMAIGS 306 (847)
Q Consensus 289 ~iP~~L~~~~~~~~~~~~ 306 (847)
++|.++|++...+.....
T Consensus 195 aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLA 212 (499)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 999999999988876554
No 213
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=39.12 E-value=21 Score=29.51 Aligned_cols=51 Identities=31% Similarity=0.376 Sum_probs=32.9
Q ss_pred HHHhhcCCEEEEEcCC-cCChhhhhhcCcce-eccccc---HHH---hhccCEEEcCCChh
Q 003103 579 KRLQERKHICGMTGDG-VNDAPALKKADIGI-AVADAT---DAA---RSASDIVLTEPGLS 631 (847)
Q Consensus 579 ~~lq~~g~~V~miGDG-~ND~~aLk~AdVGI-amg~g~---~~a---~~aaDivl~~~~~~ 631 (847)
+.+.-....+.||||. ..|..+=+++++-- .+.+|. +.. ...+|+|+ +++.
T Consensus 15 ~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv--~~l~ 73 (75)
T PF13242_consen 15 KRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV--DDLK 73 (75)
T ss_dssp HHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE--SSGG
T ss_pred HHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE--CCHH
Confidence 3343334568999999 99999999998843 333221 222 35788987 4454
No 214
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=38.85 E-value=1.3e+02 Score=31.74 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=25.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEE-EEcCCCH-HHHHHHHHHc
Q 003103 490 LFDPPRHDSAETIRRALNLGVNVK-MITGDQL-AIGKETGRRL 530 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v~-miTGD~~-~tA~~iA~~~ 530 (847)
+-|.+-++..+.++.+++.|++.+ +++=..+ +....+++..
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 335555777888888888888844 5555442 3445565554
No 215
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=38.10 E-value=1.5e+02 Score=29.46 Aligned_cols=31 Identities=19% Similarity=0.422 Sum_probs=20.6
Q ss_pred cccccCC-HHHHHHHcCCCCCCCCHHHHHHHHhh
Q 003103 17 VDLERIP-IEEVFEQLKCSREGLTSDEGAHRLHV 49 (847)
Q Consensus 17 ~~~~~~~-~~~~~~~l~~~~~GLs~~e~~~r~~~ 49 (847)
.+++++. .+++.+++. ...++.+|+.+|+++
T Consensus 62 ~nl~~l~~v~~l~~~~~--~~~~~~~ea~~~L~~ 93 (193)
T PF06738_consen 62 VNLDKLAAVNRLSRRIV--AGQLSLEEAIERLDE 93 (193)
T ss_pred cCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHH
Confidence 4444443 345555554 358999999999987
No 216
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=37.43 E-value=1e+03 Score=30.75 Aligned_cols=218 Identities=15% Similarity=0.150 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe---eCceE
Q 003103 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE---GDPLK 180 (847)
Q Consensus 104 i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~---g~~~~ 180 (847)
-++++++..+.....-++.+++.++|++ ... ......+ ++-|....+...|.+|-|.++++ |+.+-
T Consensus 196 ~~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iP 264 (1054)
T TIGR01657 196 SLCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMP 264 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEec
Confidence 3444555555556666677777766654 221 1122222 34588999999999999999997 55566
Q ss_pred EEeccccCCCceeecC--CCCcc--cc--------c------------eeeeeceEEEEEEec-cchhHhhhHH------
Q 003103 181 IDQSALTGESLPVTKN--PYDEV--FS--------G------------STCKQGEIEAVVIAT-GVHTFFGKAA------ 229 (847)
Q Consensus 181 Vdes~LTGEs~pv~K~--~~~~v--~~--------G------------t~v~~G~~~~~V~~t-G~~T~~g~i~------ 229 (847)
+|=-.+.|+. -|.-. .|+.. .. | ..+..|+....+... |..+..|...
T Consensus 265 aD~~ll~g~~-~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T 343 (1054)
T TIGR01657 265 CDSVLLSGSC-IVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFST 343 (1054)
T ss_pred ceEEEEeCcE-EEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccc
Confidence 7777777742 22221 12211 11 1 123444433332221 1111111111
Q ss_pred ---HhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 003103 230 ---HLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (847)
Q Consensus 230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~ 306 (847)
++.+......+.....++-...++..+++..++.+++.+ .........+...+...+..+=.+.|.++++++..+.
T Consensus 344 ~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~-~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l 422 (1054)
T TIGR01657 344 SKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTI-IELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGI 422 (1054)
T ss_pred cchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHH
Confidence 111111122222222333332333332222222222111 1111111233344555566677888999999999886
Q ss_pred HHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEE
Q 003103 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV 346 (847)
Q Consensus 307 ~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v 346 (847)
.. +.-.|.+-+++|.+-.---|-|+.++
T Consensus 423 ~~------------~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 423 NN------------SLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HH------------HHHHHHHCCEEEcCcccceecceeeE
Confidence 43 34566677788888777777777665
No 217
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=37.30 E-value=81 Score=25.84 Aligned_cols=32 Identities=19% Similarity=0.082 Sum_probs=24.3
Q ss_pred CCeEEEEECCeEEEEeC---CCCCCCcEEEEcCCC
Q 003103 134 APKTKVLRDGRWSEQDA---SILVPGDVISIKLGD 165 (847)
Q Consensus 134 ~~~~~V~rdg~~~~I~~---~~Lv~GDiV~l~~G~ 165 (847)
...+.|-.+|..++++. .++.|||.|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 45778888999999864 458899999999984
No 218
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=37.15 E-value=20 Score=29.03 Aligned_cols=24 Identities=33% Similarity=0.536 Sum_probs=14.0
Q ss_pred EEEECCeEEEEeCCCCCCCcEEEE
Q 003103 138 KVLRDGRWSEQDASILVPGDVISI 161 (847)
Q Consensus 138 ~V~rdg~~~~I~~~~Lv~GDiV~l 161 (847)
.|..||+...-.-..|.|||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 367799999999999999999999
No 219
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=36.76 E-value=3.3e+02 Score=32.15 Aligned_cols=69 Identities=14% Similarity=0.165 Sum_probs=50.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHH-HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHH
Q 003103 497 DSAETIRRALNLGVNVKMITGDQLA-IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (847)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~-tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~ 575 (847)
|+-.+++.+++.+-++.+++=.+.. .+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 5677777778777788888766643 345556555552 2357778899999
Q ss_pred HHHHHHhhcCCEEEEEcCCc
Q 003103 576 EIVKRLQERKHICGMTGDGV 595 (847)
Q Consensus 576 ~iV~~lq~~g~~V~miGDG~ 595 (847)
..|+.++++|..| ++||++
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~ 164 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGL 164 (538)
T ss_pred HHHHHHHHCCCCE-EEcCch
Confidence 9999999999765 779874
No 220
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=36.63 E-value=2.1e+02 Score=25.69 Aligned_cols=27 Identities=11% Similarity=0.194 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEE
Q 003103 115 SFIEENNAGNAAAALMANLAPKTKVLR 141 (847)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~r 141 (847)
.+...+|.++..+++.+.+.+-.+|+-
T Consensus 35 ~~RpqkK~~k~~~~~~~~Lk~Gd~VvT 61 (106)
T PRK05585 35 IIRPQQKRQKEHKKMLSSLAKGDEVVT 61 (106)
T ss_pred hccHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 334455555556666665555555554
No 221
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=36.18 E-value=1.3e+02 Score=32.90 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=39.3
Q ss_pred EEEecccCCCCcchHHHHHHHHhC----CCeEEEEcCCC---HH-HHHHHHHHcCCC
Q 003103 485 VGLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---LA-IGKETGRRLGMG 533 (847)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~a----GI~v~miTGD~---~~-tA~~iA~~~Gi~ 533 (847)
=|.+.-.+++-+++.++++.|++. |+++..+|... .. .+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 477778889999999999999998 99999999664 33 355566778873
No 222
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.37 E-value=69 Score=34.59 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=33.2
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.++++++.++.++.+++.|+++ .++-||++... ...|+++||..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 65 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRS 65 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 45677889999999998888874 55668887653 34567788853
No 223
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=35.20 E-value=65 Score=31.63 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=31.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 533 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miT-GD~~~tA~~iA~~~Gi~ 533 (847)
.+-|+++++++.|++.|+++.+.| -|.+..|+++=+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 346899999999999999999999 48899999999999986
No 224
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=34.98 E-value=5e+02 Score=26.35 Aligned_cols=20 Identities=30% Similarity=0.503 Sum_probs=11.0
Q ss_pred CcEEEEcCCCeeccceEEEe
Q 003103 156 GDVISIKLGDIVPADARLLE 175 (847)
Q Consensus 156 GDiV~l~~G~~vPaD~~ll~ 175 (847)
|....+...|.+|-|.+.++
T Consensus 42 ~~~~~i~~~~L~~GDiI~l~ 61 (230)
T PF00122_consen 42 GRWQKIPSSELVPGDIIILK 61 (230)
T ss_dssp TEEEEEEGGGT-TTSEEEEE
T ss_pred cccccchHhhccceeeeecc
Confidence 45555566666666666554
No 225
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=34.94 E-value=9.7e+02 Score=30.79 Aligned_cols=199 Identities=12% Similarity=0.059 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CC-eEEE----EECCeEEEEeCCCCCCCcEEEEcCCCeeccce
Q 003103 102 VGIIVLLVINSTISFIEENNAGNAAAALMANL-----AP-KTKV----LRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (847)
Q Consensus 102 ~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~-----~~-~~~V----~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~ 171 (847)
++++++..+.......+..++-+++.++.... .. ...+ +.-|....+...|.+|.|.+.++..+ +=+|=
T Consensus 111 ~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~Vde 189 (997)
T TIGR01106 111 SAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDN 189 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEc
Confidence 44555555666666777777777777663221 11 1222 24588899999999999999997642 34555
Q ss_pred EEEeeCceEEEeccccCCCcee-e---cCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhh-ccCCCCchHHHHH
Q 003103 172 RLLEGDPLKIDQSALTGESLPV-T---KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQKVLT 246 (847)
Q Consensus 172 ~ll~g~~~~Vdes~LTGEs~pv-~---K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~-~~~~~~~~~~~~~ 246 (847)
-.+.|++.-|.-..-..+..|. . -..|..+.+|+-..-=...|.=+..|.-...-+ +.-. ...-...+++..+
T Consensus 190 S~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~--~~~~~~~pl~~~~~~~~~ 267 (997)
T TIGR01106 190 SSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLAS--GLENGKTPIAIEIEHFIH 267 (997)
T ss_pred cccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhh--hcccCCCcHHHHHHHHHH
Confidence 5555654333222110011111 1 124566667754322222333444443332111 1111 1221234556666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 003103 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (847)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~ 304 (847)
.+..+.+++.++.+++..+..+. ....+..++...++.+-.++|..+++++..+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 268 IITGVAVFLGVSFFILSLILGYT-WLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 66655433322222222222222 1233445566666667788899888888887654
No 226
>PF15584 Imm44: Immunity protein 44
Probab=34.91 E-value=18 Score=31.15 Aligned_cols=20 Identities=30% Similarity=0.373 Sum_probs=16.2
Q ss_pred CCcEEEEcCCCeeccceEEE
Q 003103 155 PGDVISIKLGDIVPADARLL 174 (847)
Q Consensus 155 ~GDiV~l~~G~~vPaD~~ll 174 (847)
+.+-..|+.|++|||||+--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 44556789999999999873
No 227
>PF08069 Ribosomal_S13_N: Ribosomal S13/S15 N-terminal domain; InterPro: IPR012606 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This domain is found at the N terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005840 ribosome; PDB: 3U5C_N 3O30_G 3IZB_O 3O2Z_G 3U5G_N 2XZN_O 2XZM_O 3IZ6_O.
Probab=34.04 E-value=22 Score=28.25 Aligned_cols=47 Identities=21% Similarity=0.205 Sum_probs=25.4
Q ss_pred cccchhhhcccCcccccCCHHHHHHHcC-CCCCCCCHHHHHHHHh-hcC
Q 003103 5 KAISLEEIKNESVDLERIPIEEVFEQLK-CSREGLTSDEGAHRLH-VFG 51 (847)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~GLs~~e~~~r~~-~~G 51 (847)
+.-+..+|+...+.|-+.+.||+.+..- -..+|+++.|+---|+ +||
T Consensus 11 ~S~S~~P~~~~~P~W~~~~~~eVe~~I~klakkG~tpSqIG~iLRD~~G 59 (60)
T PF08069_consen 11 ISGSTRPYRRSPPSWLKYSPEEVEELIVKLAKKGLTPSQIGVILRDQYG 59 (60)
T ss_dssp -------S-SS--TT--S-HHHHHHHHHHHCCTTHCHHHHHHHHHHSCT
T ss_pred ccCCCCCCCCCCCCCcCCCHHHHHHHHHHHHHcCCCHHHhhhhhhhccC
Confidence 4456678888889999999998876554 3578999999876554 454
No 228
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=33.96 E-value=21 Score=35.32 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.6
Q ss_pred EEecCCCccccCce
Q 003103 331 LCSDKTGTLTLNKL 344 (847)
Q Consensus 331 i~~DKTGTLT~~~m 344 (847)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999973
No 229
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=33.23 E-value=79 Score=34.37 Aligned_cols=147 Identities=16% Similarity=0.128 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHccCeEEEEEeeecCCCC--------CCCCCCCceEEEEecccCCCCcchH--HHHHHHHhCCCe--E-
Q 003103 446 KKVHAVIDKFAERGLRSLGVARQEIPEKT--------KESPGAPWQLVGLLPLFDPPRHDSA--ETIRRALNLGVN--V- 512 (847)
Q Consensus 446 ~~~~~~~~~~~~~G~rvl~~a~~~~~~~~--------~~~~e~~l~~lG~i~~~D~lr~~~~--~~I~~l~~aGI~--v- 512 (847)
+...+.++-+.+.|++=+.++.|..+-.. .+..+..| -+|++---....--++ -.|-.|-..||- +
T Consensus 151 eSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIGDTIR 229 (346)
T TIGR00612 151 QSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIGDTIR 229 (346)
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCCCeEE
Confidence 33445556666778888888777533110 01111222 2444433333332333 346778888873 2
Q ss_pred EEEcCCCH---HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh---hHHHHHHHHhh--c
Q 003103 513 KMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE---HKYEIVKRLQE--R 584 (847)
Q Consensus 513 ~miTGD~~---~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~---qK~~iV~~lq~--~ 584 (847)
+=+|+|.. .+|..|-+.+|+...... +.. |.-|+|+.-+ .=.++-+.+++ .
T Consensus 230 VSLT~dP~~EV~va~~IL~slglr~~g~~---iiS------------------CPtCGR~~~dl~~~~~~ve~~l~~~~~ 288 (346)
T TIGR00612 230 VSLTDDPTHEVPVAFEILQSLGLRARGVE---IVA------------------CPSCGRTGFDVEKVVRRVQEALFHLKT 288 (346)
T ss_pred EECCCCcHHHHHHHHHHHHHcCCCcCCCe---EEE------------------CCCCCCcCCCHHHHHHHHHHHHhcCCC
Confidence 34688875 467778888888542110 000 1123333211 11122233443 3
Q ss_pred CCEEEEEcCCcCChhhhhhcCcceecc-ccc
Q 003103 585 KHICGMTGDGVNDAPALKKADIGIAVA-DAT 614 (847)
Q Consensus 585 g~~V~miGDG~ND~~aLk~AdVGIamg-~g~ 614 (847)
.-+||..|-=+|-..--++||+|||-| .|.
T Consensus 289 ~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 289 PLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 578999999999999999999999987 654
No 230
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.45 E-value=1.4e+02 Score=31.96 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=31.5
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.+.+|++.++.++.+++. |++ ..++.||++... ...|+++||..
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888889998876 666 346778887543 45677888853
No 231
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.23 E-value=84 Score=33.62 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=33.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.++++++.++-++.|++.|++ +.++.||++... ...|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4566788899999999988886 566779987543 45677889853
No 232
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=31.87 E-value=2.9e+02 Score=23.67 Aligned_cols=24 Identities=25% Similarity=0.307 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEE
Q 003103 118 EENNAGNAAAALMANLAPKTKVLR 141 (847)
Q Consensus 118 ~e~~~~~~~~~l~~~~~~~~~V~r 141 (847)
..+|+++..+++.+.+.+--+|+-
T Consensus 23 pqkK~~k~~~~m~~~L~~Gd~VvT 46 (84)
T TIGR00739 23 PQRKRRKAHKKLIESLKKGDKVLT 46 (84)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEE
Confidence 344445555555554555444443
No 233
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=31.47 E-value=5.2e+02 Score=31.49 Aligned_cols=81 Identities=17% Similarity=0.125 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCc-EEEEcCCCeeccceEEEe-e
Q 003103 100 DFVGIIVLLVINSTISFIEENNAG-NAAAALMANLAPKTKVLRDGRWSEQDASILVPGD-VISIKLGDIVPADARLLE-G 176 (847)
Q Consensus 100 ~~~~i~~~i~~~~~~~~~~e~~~~-~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GD-iV~l~~G~~vPaD~~ll~-g 176 (847)
+.+.+.++++++.+++.+.|..++ |+.+.+.++..... +-.-.. ++-|. ...+...+.+|-|.++++ |
T Consensus 64 ~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~----~~~a~v-----ir~g~~~~~V~~~eL~~GDiV~v~~G 134 (679)
T PRK01122 64 FNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK----DTFARK-----LREPGAAEEVPATELRKGDIVLVEAG 134 (679)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCeEEE-----EECCCEEEEEEHHHcCCCCEEEEcCC
Confidence 345566778888888888777776 45555554333221 111222 22355 678889999999999995 4
Q ss_pred CceEEEeccccCC
Q 003103 177 DPLKIDQSALTGE 189 (847)
Q Consensus 177 ~~~~Vdes~LTGE 189 (847)
+.+-+|=-.+.|+
T Consensus 135 d~IPaDG~vieG~ 147 (679)
T PRK01122 135 EIIPADGEVIEGV 147 (679)
T ss_pred CEEEEEEEEEEcc
Confidence 4455666666664
No 234
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=31.19 E-value=3.9e+02 Score=27.09 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCC-------cchHHHHHHHHhCCCeEEEEcC
Q 003103 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR-------HDSAETIRRALNLGVNVKMITG 517 (847)
Q Consensus 445 ~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr-------~~~~~~I~~l~~aGI~v~miTG 517 (847)
.+...+..+.+.+.|.|++-+..+. +..+..+..+.=+-+.+ ==..+-++...++|-+-.+..+
T Consensus 21 ~~~~~~~~~a~~~gGi~~iEvt~~~---------~~~~~~i~~l~~~~~~~~~iGaGTV~~~~~~~~a~~aGA~fivsp~ 91 (206)
T PRK09140 21 PDEALAHVGALIEAGFRAIEIPLNS---------PDPFDSIAALVKALGDRALIGAGTVLSPEQVDRLADAGGRLIVTPN 91 (206)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCC---------ccHHHHHHHHHHHcCCCcEEeEEecCCHHHHHHHHHcCCCEEECCC
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh--HHHHHHHHhhcC---CEEEEEc
Q 003103 518 DQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH--KYEIVKRLQERK---HICGMTG 592 (847)
Q Consensus 518 D~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q--K~~iV~~lq~~g---~~V~miG 592 (847)
+++..... +++.|+.- .....+.+++.+..+.--=+-...|.+ -.+.++.+++.- -.+..+|
T Consensus 92 ~~~~v~~~-~~~~~~~~------------~~G~~t~~E~~~A~~~Gad~vk~Fpa~~~G~~~l~~l~~~~~~~ipvvaiG 158 (206)
T PRK09140 92 TDPEVIRR-AVALGMVV------------MPGVATPTEAFAALRAGAQALKLFPASQLGPAGIKALRAVLPPDVPVFAVG 158 (206)
T ss_pred CCHHHHHH-HHHCCCcE------------EcccCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHhhcCCCCeEEEEC
Q ss_pred CCcC--ChhhhhhcCc-ceecccc
Q 003103 593 DGVN--DAPALKKADI-GIAVADA 613 (847)
Q Consensus 593 DG~N--D~~aLk~AdV-GIamg~g 613 (847)
|+| +++.+.+|++ |++++++
T Consensus 159 -GI~~~n~~~~~~aGa~~vav~s~ 181 (206)
T PRK09140 159 -GVTPENLAPYLAAGAAGFGLGSA 181 (206)
T ss_pred -CCCHHHHHHHHHCCCeEEEEehH
No 235
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.13 E-value=87 Score=33.57 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=33.3
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.+.++++.++.++.+++.|+++ .++-||++... ...|+++||..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667889999999999888774 55679987544 44577889853
No 236
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.87 E-value=96 Score=33.15 Aligned_cols=45 Identities=13% Similarity=0.207 Sum_probs=33.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.++++++.++.++.+++.|++ ..++-||++... ...|+++||..
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999888876 466679887543 44677889853
No 237
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=30.67 E-value=1.1e+02 Score=33.04 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=26.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHH-HHHHHHcCC
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGM 532 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA-~~iA~~~Gi 532 (847)
+++...-+.|++.|.+++++|.+....+ ++..+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 3566667888999999999997765544 444455555
No 238
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=29.52 E-value=1e+02 Score=28.37 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=24.1
Q ss_pred CCCcchHHHHHHHHhC-CC---eEEEEcCCCHHHHHHHHHHcCCC
Q 003103 493 PPRHDSAETIRRALNL-GV---NVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~a-GI---~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
..||...-....+++. ++ +++|+ ||+...-...|+++|+.
T Consensus 83 ~~KP~~~~~~~~~~~~~~~~~~~~v~I-GD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 CRKPKPGMFLEALKRFNEIDPEESVYV-GDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCChHHHHHHHHHcCCCChhheEEE-cCCCcccHHHHHHCCCe
Confidence 3344333333444455 35 36665 99666778889999984
No 239
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=29.33 E-value=97 Score=29.15 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=50.9
Q ss_pred HHHHccCeEEEEEeeecCCCC-CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCe--EEEEcCCCH----H--HHH
Q 003103 454 KFAERGLRSLGVARQEIPEKT-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGDQL----A--IGK 524 (847)
Q Consensus 454 ~~~~~G~rvl~~a~~~~~~~~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~--v~miTGD~~----~--tA~ 524 (847)
-+...|++|+.+....-+++- +...+.+-.++|+-++-=.--+..+++++.|+++|.+ ++|+-|--. . .-.
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 356789999988765433211 1112334568888887777777889999999999973 555655311 1 113
Q ss_pred HHHHHcCCC
Q 003103 525 ETGRRLGMG 533 (847)
Q Consensus 525 ~iA~~~Gi~ 533 (847)
.-++++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 446778863
No 240
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=29.09 E-value=87 Score=28.48 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=27.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi 532 (847)
-+++.++++.+++.|++++.+|++.+ -...+.+-|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 46889999999999999999999875 2334555454
No 241
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.03 E-value=1e+02 Score=33.08 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=31.5
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.++++++.++-++.+++. |++ ..++-||++... ...|+++||..
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDS 63 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788888999999855 776 455678887543 44667888853
No 242
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=28.92 E-value=59 Score=29.89 Aligned_cols=79 Identities=14% Similarity=0.140 Sum_probs=52.5
Q ss_pred HHHHccCeEEEEEeeecCCCC--CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHHH
Q 003103 454 KFAERGLRSLGVARQEIPEKT--KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIGKETGRR 529 (847)
Q Consensus 454 ~~~~~G~rvl~~a~~~~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~v-~miTGD~~~tA~~iA~~ 529 (847)
-+...|++|+.+.... +.++ ....+.+-.++++-.......+.+++.++.|++.|. ++ +++-|..+.--.+-.++
T Consensus 22 ~l~~~G~~vi~lG~~v-p~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 22 ALRDAGFEVIYTGLRQ-TPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 4667899998877542 2111 111133446888888888889999999999999977 44 45555554433455568
Q ss_pred cCCC
Q 003103 530 LGMG 533 (847)
Q Consensus 530 ~Gi~ 533 (847)
.|+.
T Consensus 101 ~G~d 104 (122)
T cd02071 101 MGVA 104 (122)
T ss_pred CCCC
Confidence 8874
No 243
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.92 E-value=1e+02 Score=33.15 Aligned_cols=45 Identities=18% Similarity=0.285 Sum_probs=33.3
Q ss_pred ccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHH------HHHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAI------GKETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~t------A~~iA~~~Gi~~ 534 (847)
+.+.+|++.++-++.+++.|++ ..++-||++.. ....|+++||..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEA 63 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4566788899999999988886 45667988754 345677889853
No 244
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=28.68 E-value=89 Score=30.19 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=37.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.=.+||++.+.+++|++. +++.+.|.-....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345799999999999955 999999999999999999998864
No 245
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=27.96 E-value=1.1e+02 Score=25.73 Aligned_cols=47 Identities=13% Similarity=0.270 Sum_probs=36.7
Q ss_pred EecccCCCCcchHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHcCCC
Q 003103 487 LLPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 487 ~i~~~D~lr~~~~~~I~~l~~aGI~v~m-iTGD~~~tA~~iA~~~Gi~ 533 (847)
++.+.+..++.+.+..+.||+.|+++.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445566788889999999999999988 5666666677778888874
No 246
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=27.63 E-value=71 Score=28.24 Aligned_cols=30 Identities=20% Similarity=0.451 Sum_probs=23.9
Q ss_pred EEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 003103 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (847)
Q Consensus 137 ~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~v 167 (847)
-+|.-||+.. -|+.++++||+|.|.-|...
T Consensus 34 GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 34 GRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 3566677766 79999999999999888743
No 247
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=27.47 E-value=5e+02 Score=28.06 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=25.6
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
|+..++.+. +..+|+=|....+....|+..+++
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 444444444 566999999999999999999885
No 248
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.08 E-value=1.1e+02 Score=32.89 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=31.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.+.+|++.++-++.+++.|+++ .++-||++... ...|+++||..
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHS 64 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEE
Confidence 45667888888888888878763 55668887533 44567788853
No 249
>smart00532 LIGANc Ligase N family.
Probab=26.61 E-value=1.2e+02 Score=34.72 Aligned_cols=52 Identities=19% Similarity=0.303 Sum_probs=32.0
Q ss_pred EeCCCCCCCcEEEE-cCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccceeee
Q 003103 148 QDASILVPGDVISI-KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCK 208 (847)
Q Consensus 148 I~~~~Lv~GDiV~l-~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~ 208 (847)
|...+|.+||.|.| ++||+||.=.. |....=+|++.|+ ..|..+.-.|+.+.
T Consensus 358 i~~~~i~iGd~V~V~raGdVIP~I~~--------vv~~~r~~~~~~~-~~P~~CP~C~s~l~ 410 (441)
T smart00532 358 IEEKDIRIGDTVVVRKAGDVIPKVVG--------VVKEKRPGDEREI-EMPTHCPSCGSELV 410 (441)
T ss_pred HHHcCCCCCCEEEEEECCCcCcceee--------cccccCCCCCccC-cCCCCCCCCCCEeE
Confidence 34678999999999 79999997222 2222223444443 23445556677765
No 250
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.40 E-value=1.2e+02 Score=32.62 Aligned_cols=45 Identities=18% Similarity=0.308 Sum_probs=32.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHH------HHHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~t------A~~iA~~~Gi~~ 534 (847)
+.+.+|++.++-++.+++.|+++ .++-||++.. ....|+++||..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667888899999998888763 4556888753 355677888853
No 251
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=26.30 E-value=1.3e+02 Score=33.05 Aligned_cols=58 Identities=29% Similarity=0.433 Sum_probs=38.7
Q ss_pred HHHHHHHhhcCCEEEEEcCCc--------------------CChhhhhhc--Ccceecc-c---ccHHHhh--ccCEEEc
Q 003103 575 YEIVKRLQERKHICGMTGDGV--------------------NDAPALKKA--DIGIAVA-D---ATDAARS--ASDIVLT 626 (847)
Q Consensus 575 ~~iV~~lq~~g~~V~miGDG~--------------------ND~~aLk~A--dVGIamg-~---g~~~a~~--aaDivl~ 626 (847)
..+++.|+++|..|+.+.-|. .|-|+|=+- ++.+.++ + +...+.+ .+|++++
T Consensus 69 ~~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 148 (325)
T PRK00652 69 IALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIIL 148 (325)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEE
Confidence 356788888999999885442 366655433 6777776 2 3333433 5899999
Q ss_pred CCChhh
Q 003103 627 EPGLSV 632 (847)
Q Consensus 627 ~~~~~~ 632 (847)
||.|..
T Consensus 149 DDGfQh 154 (325)
T PRK00652 149 DDGLQH 154 (325)
T ss_pred cCCccC
Confidence 998865
No 252
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.11 E-value=1.3e+02 Score=32.30 Aligned_cols=45 Identities=11% Similarity=0.131 Sum_probs=32.2
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------GKETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~iA~~~Gi~~ 534 (847)
+...+|++.++.++.+++. |++ ..++.||++.. -...|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVS 63 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888999999877 776 45667988764 345677888854
No 253
>PRK04980 hypothetical protein; Provisional
Probab=25.98 E-value=76 Score=28.26 Aligned_cols=58 Identities=28% Similarity=0.393 Sum_probs=39.5
Q ss_pred CCeEEEEECCeEEEEeCCCCCCCcEEEEc--CCCeeccceEEEeeCceEEEe-----ccccCCCceeecC
Q 003103 134 APKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQ-----SALTGESLPVTKN 196 (847)
Q Consensus 134 ~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~--~G~~vPaD~~ll~g~~~~Vde-----s~LTGEs~pv~K~ 196 (847)
..+..-+||+. .+..+|||++.|. .+++.-|+..+++-....+|| +..-|+|.+.-|.
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk~ 82 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELKQ 82 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHHH
Confidence 44556677753 3579999999997 888999999999874333333 3345666555443
No 254
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=25.82 E-value=1.6e+02 Score=30.66 Aligned_cols=102 Identities=18% Similarity=0.177 Sum_probs=53.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhH-
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK- 574 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK- 574 (847)
++..+++++||+.|..+.++|-=... ...+=..+|+... ++.++..+.+ .-..|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~--------------------fD~vv~S~e~-g~~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAY--------------------FDFVVESCEV-GLEKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHh--------------------hhhhhhhhhh-ccCCCChHH
Confidence 35559999999999888888843322 2244445555311 1111111100 00112222
Q ss_pred -HHHHHHHhhcCCEEEEEcCC-cCChhhhhhcCc-ceecccccHHHhh
Q 003103 575 -YEIVKRLQERKHICGMTGDG-VNDAPALKKADI-GIAVADATDAARS 619 (847)
Q Consensus 575 -~~iV~~lq~~g~~V~miGDG-~ND~~aLk~AdV-GIamg~g~~~a~~ 619 (847)
...++.+.-+-.-+.++||. .||..+-+.++. ++=+.++....++
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 12233444445568999998 599988777665 3333444444443
No 255
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=25.82 E-value=1.2e+02 Score=25.98 Aligned_cols=41 Identities=17% Similarity=0.064 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCC
Q 003103 108 LVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGD 165 (847)
Q Consensus 108 i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~ 165 (847)
+++..++-++.-+..+|..++.+++. ++|+|||-|....|-
T Consensus 10 vv~~~i~yf~~~rpqkK~~k~~~~m~-----------------~~L~~Gd~VvT~gGi 50 (84)
T TIGR00739 10 VLIFLIFYFLIIRPQRKRRKAHKKLI-----------------ESLKKGDKVLTIGGI 50 (84)
T ss_pred HHHHHHHHHheechHHHHHHHHHHHH-----------------HhCCCCCEEEECCCe
Confidence 33444455566666666655544432 579999998887774
No 256
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.78 E-value=1.3e+02 Score=32.34 Aligned_cols=45 Identities=13% Similarity=0.193 Sum_probs=32.4
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------GKETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~iA~~~Gi~~ 534 (847)
+.+++|++.++-++.+++. |++ +.++.||++.. -...|+++||..
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 3456788888999999877 666 46677988754 345677888853
No 257
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=25.78 E-value=1.7e+02 Score=28.58 Aligned_cols=55 Identities=15% Similarity=0.256 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHH
Q 003103 443 DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 521 (847)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~ 521 (847)
....-+..+++.+++.|=-.++++... + -+++..+++..++.|++|+-+||.+-.
T Consensus 94 ~yd~vFsRqveA~g~~GDvLigISTSG----------------------N--S~nVl~Ai~~Ak~~gm~vI~ltG~~GG 148 (176)
T COG0279 94 GYDEVFSRQVEALGQPGDVLIGISTSG----------------------N--SKNVLKAIEAAKEKGMTVIALTGKDGG 148 (176)
T ss_pred cHHHHHHHHHHhcCCCCCEEEEEeCCC----------------------C--CHHHHHHHHHHHHcCCEEEEEecCCCc
Confidence 344456667777777775555554332 1 358899999999999999999998854
No 258
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=25.67 E-value=1.2e+02 Score=29.66 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=50.8
Q ss_pred HHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHHHH
Q 003103 448 VHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIGK 524 (847)
Q Consensus 448 ~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA~ 524 (847)
..+-++++...|.+++.++-.. +.....=..-+|+=.+.--.||-....=+.|++.++. |+|+ ||...|=.
T Consensus 51 ~~~W~~e~k~~gi~v~vvSNn~-----e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~TDV 124 (175)
T COG2179 51 LRAWLAELKEAGIKVVVVSNNK-----ESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFTDV 124 (175)
T ss_pred HHHHHHHHHhcCCEEEEEeCCC-----HHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhhhh
Confidence 3444567888999999887532 1111100122334444444566666666666777764 8888 99999998
Q ss_pred HHHHHcCCC
Q 003103 525 ETGRRLGMG 533 (847)
Q Consensus 525 ~iA~~~Gi~ 533 (847)
--|+..|+-
T Consensus 125 lggnr~G~~ 133 (175)
T COG2179 125 LGGNRAGMR 133 (175)
T ss_pred hcccccCcE
Confidence 889999984
No 259
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=25.17 E-value=39 Score=35.14 Aligned_cols=26 Identities=4% Similarity=-0.024 Sum_probs=20.2
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHH
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLA 521 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~ 521 (847)
-++..++++.|++.|++. ++|+....
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~ 165 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRG 165 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEe
Confidence 368888999998899997 66775543
No 260
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.04 E-value=1.4e+02 Score=31.83 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=33.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.++++++.++.++.+++.|++ ..++-||++... ...|+++||..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999988887 456679887543 45677889854
No 261
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.85 E-value=2.5e+02 Score=29.95 Aligned_cols=62 Identities=19% Similarity=0.323 Sum_probs=34.6
Q ss_pred eEEEeChhhHHHHHHHHhh--cCCEEEEEcCCc-CChh---hhhhcC--cceecccccHH--HhhccCEEEc
Q 003103 565 GFAGVFPEHKYEIVKRLQE--RKHICGMTGDGV-NDAP---ALKKAD--IGIAVADATDA--ARSASDIVLT 626 (847)
Q Consensus 565 v~ar~sP~qK~~iV~~lq~--~g~~V~miGDG~-ND~~---aLk~Ad--VGIamg~g~~~--a~~aaDivl~ 626 (847)
-|.=+||.-=.++++...- .|..|..+|.+. -=-| +|...+ |-++-....+. .-..||+++.
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~ 201 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVS 201 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEE
Confidence 3455666655555555432 389999999993 3444 554444 44443322222 2347888874
No 262
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=24.78 E-value=7e+02 Score=29.38 Aligned_cols=101 Identities=17% Similarity=0.140 Sum_probs=66.5
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHH
Q 003103 497 DSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (847)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~-~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~ 575 (847)
|+-.+++.+++.+=++.+++=.+. ..+..++.-+++. ..++.-.++++=.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 135 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD-----------------------------IVQRSYVTEEDAR 135 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 566777777877777777776654 3355566656552 2367778899999
Q ss_pred HHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhc-cCEEEcCCChhhHHHHHHHHHHHHH
Q 003103 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA-SDIVLTEPGLSVIISAVLTSRAIFQ 645 (847)
Q Consensus 576 ~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~a-aDivl~~~~~~~i~~~i~~gR~~~~ 645 (847)
..|+.++++|..+ ++||++- ++.|++. -.-|+..+. .+|..++......++
T Consensus 136 ~~~~~l~~~G~~~-viG~~~~-----------------~~~A~~~gl~~ili~s~-esi~~a~~~A~~~~~ 187 (526)
T TIGR02329 136 SCVNDLRARGIGA-VVGAGLI-----------------TDLAEQAGLHGVFLYSA-DSVRQAFDDALDVAR 187 (526)
T ss_pred HHHHHHHHCCCCE-EECChHH-----------------HHHHHHcCCceEEEecH-HHHHHHHHHHHHHHH
Confidence 9999999999765 7798732 2333321 223444443 777777777766544
No 263
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=24.52 E-value=1.6e+02 Score=26.63 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCC
Q 003103 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLG 164 (847)
Q Consensus 100 ~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G 164 (847)
....++.++++.+++-|+.-+.++|..++.+++. ++|+|||-|.-..|
T Consensus 3 ~~~~ll~lv~i~~i~yF~~iRPQkKr~K~~~~m~-----------------~~Lk~GD~VvT~gG 50 (109)
T PRK05886 3 SLVLFLPFLLIMGGFMYFASRRQRKAMQATIDLH-----------------ESLQPGDRVHTTSG 50 (109)
T ss_pred hHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH-----------------HhcCCCCEEEECCC
No 264
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=24.33 E-value=80 Score=28.64 Aligned_cols=80 Identities=13% Similarity=0.237 Sum_probs=52.9
Q ss_pred HHHHHccCeEEEEEeeecCCCC--CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC-e-EEEEcCCCHHHHHHHHH
Q 003103 453 DKFAERGLRSLGVARQEIPEKT--KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-N-VKMITGDQLAIGKETGR 528 (847)
Q Consensus 453 ~~~~~~G~rvl~~a~~~~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~-v~miTGD~~~tA~~iA~ 528 (847)
.-+...|++|+.+... .+.++ ..-.+.+..++|+-...++--+.+++.++.+|+.+- + .+++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3456789999776633 22211 111234557888888877777999999999999986 5 46666655443345778
Q ss_pred HcCCC
Q 003103 529 RLGMG 533 (847)
Q Consensus 529 ~~Gi~ 533 (847)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88864
No 265
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.19 E-value=1.5e+02 Score=31.66 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=32.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.+.++++.++.++.+++.|++. .++-||++... ...|+++||..
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34567888899999998888774 56678887543 45677889853
No 266
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=23.84 E-value=8.7e+02 Score=25.58 Aligned_cols=29 Identities=21% Similarity=0.292 Sum_probs=18.7
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChh
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAP 599 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~ 599 (847)
|++=.+.++.+++....-.++|=|+++..
T Consensus 185 ~~~~~~~i~~vk~~~~~pv~vGfGI~~~e 213 (258)
T PRK13111 185 AADLAELVARLKAHTDLPVAVGFGISTPE 213 (258)
T ss_pred CccHHHHHHHHHhcCCCcEEEEcccCCHH
Confidence 44445677777776445557799986544
No 267
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.71 E-value=2.8e+02 Score=26.66 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=15.5
Q ss_pred eEEEEeCCCCCCCcEEEEcCC
Q 003103 144 RWSEQDASILVPGDVISIKLG 164 (847)
Q Consensus 144 ~~~~I~~~~Lv~GDiV~l~~G 164 (847)
+..-+++..+.-|-||+++..
T Consensus 97 ~~v~VNst~l~dG~iVki~~~ 117 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIGDK 117 (149)
T ss_pred heEEEecccccCCeEEEECCc
Confidence 356678888888888887733
No 268
>PRK00035 hemH ferrochelatase; Reviewed
Probab=23.30 E-value=1.8e+02 Score=32.01 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=25.0
Q ss_pred CCcchHHHHHHHHhCCCe-EE----EEcCCCHHHHHHH
Q 003103 494 PRHDSAETIRRALNLGVN-VK----MITGDQLAIGKET 526 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~-v~----miTGD~~~tA~~i 526 (847)
+.|++.+++++|.+.|++ |. +.+.|+.+|-..+
T Consensus 246 l~P~~~~~l~~l~~~g~k~V~v~P~~Fv~D~lEtl~ei 283 (333)
T PRK00035 246 LEPYTDDTLEELAEKGVKKVVVVPPGFVSDHLETLEEI 283 (333)
T ss_pred CCCCHHHHHHHHHHcCCCeEEEECCeeeccchhHHHHH
Confidence 679999999999999975 33 3467987764433
No 269
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.02 E-value=1.5e+02 Score=31.54 Aligned_cols=45 Identities=9% Similarity=0.165 Sum_probs=32.1
Q ss_pred ccCCCCcchHHHHHHHHhCCCe----EEEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNLGVN----VKMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~----v~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.+++|++.++-++++++.|.+ ..++-||++... ...|+++||..
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDF 64 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788888999999877742 456778887654 45577888853
No 270
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=23.00 E-value=1.1e+02 Score=26.02 Aligned_cols=12 Identities=33% Similarity=0.349 Sum_probs=0.0
Q ss_pred CCCCCcEEEEcC
Q 003103 152 ILVPGDVISIKL 163 (847)
Q Consensus 152 ~Lv~GDiV~l~~ 163 (847)
+|+|||-|....
T Consensus 36 ~Lk~Gd~VvT~g 47 (82)
T PF02699_consen 36 SLKPGDEVVTIG 47 (82)
T ss_dssp ------------
T ss_pred cCCCCCEEEECC
Confidence 344444444433
No 271
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=22.66 E-value=2.5e+02 Score=26.34 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=17.4
Q ss_pred HHHHHHhhcCCEEEEEcCCcCChhhhh
Q 003103 576 EIVKRLQERKHICGMTGDGVNDAPALK 602 (847)
Q Consensus 576 ~iV~~lq~~g~~V~miGDG~ND~~aLk 602 (847)
..++.++++|..|..+|-...-++.|+
T Consensus 114 ~~i~~lr~~G~~V~v~~~~~~~s~~L~ 140 (149)
T cd06167 114 PLVERLRELGKRVIVVGFEAKTSRELR 140 (149)
T ss_pred HHHHHHHHcCCEEEEEccCccChHHHH
Confidence 346677777777777777655555444
No 272
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=22.44 E-value=4.2e+02 Score=21.40 Aligned_cols=26 Identities=19% Similarity=0.432 Sum_probs=16.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHH
Q 003103 63 VLKFLGFMWNPLSWVMEAAAIMAIAL 88 (847)
Q Consensus 63 ~~~~~~~~~~~~~~~l~~~~il~~~~ 88 (847)
++++++.+|..+-.++.+++.+++..
T Consensus 3 fK~~fk~iW~~~DIi~Fila~i~i~i 28 (63)
T PF06341_consen 3 FKKFFKTIWKYFDIILFILAMIFINI 28 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777777666666666665543
No 273
>TIGR00575 dnlj DNA ligase, NAD-dependent. The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed.
Probab=22.25 E-value=1.4e+02 Score=36.18 Aligned_cols=52 Identities=23% Similarity=0.390 Sum_probs=32.6
Q ss_pred eCCCCCCCcEEEE-cCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccceeeee
Q 003103 149 DASILVPGDVISI-KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQ 209 (847)
Q Consensus 149 ~~~~Lv~GDiV~l-~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~ 209 (847)
...+|.+||.|.| ++||+||. |++ |....=+|++.|. .-|..+...||.+..
T Consensus 352 ~~~~i~iGD~V~V~raGdVIP~---i~~-----vv~~~r~~~~~~~-~~P~~CP~C~s~l~~ 404 (652)
T TIGR00575 352 EELDIRIGDTVVVRKAGDVIPK---VVR-----VLLEKRTGSERPI-RFPTHCPSCGSPLVK 404 (652)
T ss_pred HHcCCCCCCEEEEEecCCcCce---eee-----eccccCCCCCCCC-CCCCCCCCCCCEeEe
Confidence 3568999999999 79999995 221 1111123444443 245567778887764
No 274
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.24 E-value=1.4e+02 Score=31.98 Aligned_cols=45 Identities=18% Similarity=0.316 Sum_probs=32.2
Q ss_pred cccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHcCCC
Q 003103 489 PLFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------GKETGRRLGMG 533 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~iA~~~Gi~ 533 (847)
.+.+.+|++.++-++.+++. |++ ..++-||++.. -...|+++||.
T Consensus 15 ~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~ 69 (287)
T PRK14176 15 ALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIR 69 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCE
Confidence 35667788888999999877 766 35666888643 34567788884
No 275
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=22.19 E-value=72 Score=34.26 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=28.5
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCe-EEEEcCCCHH
Q 003103 483 QLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLA 521 (847)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~-v~miTGD~~~ 521 (847)
..+--+..+|.-|.+..+-+..++++||+ +..+|||.+.
T Consensus 72 ~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 72 EPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp -EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred ceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 34455566777788888999999999997 9999999864
No 276
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=22.10 E-value=57 Score=25.28 Aligned_cols=12 Identities=42% Similarity=0.675 Sum_probs=10.3
Q ss_pred CCCcEEEEcCCC
Q 003103 154 VPGDVISIKLGD 165 (847)
Q Consensus 154 v~GDiV~l~~G~ 165 (847)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999885
No 277
>PF06923 GutM: Glucitol operon activator protein (GutM); InterPro: IPR009693 This family consists of several glucitol operon activator (GutM) proteins. Expression of the glucitol (gut) operon in Escherichia coli is regulated by an unusual, complex system, which consists of an activator (encoded by the gutM gene) and a repressor (encoded by the gutR gene) in addition to the cAMP-CRP complex (CRP, cAMP receptor protein). Synthesis of the mRNA, which initiates at the promoter specific to the gutR gene, occurs within the gutM gene. Expressional control of the gut operon appears to occur as a consequence of the antagonistic action of the products of the autogenously regulated gutM and gutR genes [].
Probab=22.01 E-value=5.9e+02 Score=22.96 Aligned_cols=64 Identities=14% Similarity=0.289 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCC-eeccceEEEee
Q 003103 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGD-IVPADARLLEG 176 (847)
Q Consensus 104 i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~-~vPaD~~ll~g 176 (847)
++++.++..+++++|-++-.+...++.+.- .+-+=|. ..-..+|-||.+.-++ -.-.|+...+|
T Consensus 8 ~~~~~~lQ~~l~~~Qik~f~~~~~~l~~~G--~V~iG~~-------~g~f~~g~Ivlla~D~~~~I~~~~~M~G 72 (109)
T PF06923_consen 8 LVIAWLLQILLGWFQIKNFNKAYKELRKKG--RVGIGRS-------KGRFRPGVIVLLAVDEDGRIVDAEIMKG 72 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEeee-------cCcccCCeEEEEEECCCCcEEEEEEEec
Confidence 445567788889999999888888887422 3322221 2346789999886543 23345555555
No 278
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=21.85 E-value=1e+02 Score=32.01 Aligned_cols=47 Identities=26% Similarity=0.239 Sum_probs=32.8
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHH-HHHHHHcCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIG-KETGRRLGM 532 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA-~~iA~~~Gi 532 (847)
|.+.-.+.+=+++.++|+.+++.|++++++|. ...... ..+.+..|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 44555566677999999999999999999994 444333 333333565
No 279
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.80 E-value=1.6e+02 Score=31.69 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=32.2
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.+++|++.++.++.+++. |+++ .++-||++... ...|+++||..
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~ 64 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIAS 64 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 4566788888999988776 7763 66678887543 44577888854
No 280
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=21.64 E-value=98 Score=26.65 Aligned_cols=27 Identities=30% Similarity=0.228 Sum_probs=20.4
Q ss_pred eEEEEECCeEEEEeCCCCCCCcEEEEc
Q 003103 136 KTKVLRDGRWSEQDASILVPGDVISIK 162 (847)
Q Consensus 136 ~~~V~rdg~~~~I~~~~Lv~GDiV~l~ 162 (847)
...+.++|+.+.+.+++|++||.|.+.
T Consensus 73 ~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 73 LLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 345556666667889999999999764
No 281
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.61 E-value=1.8e+02 Score=31.38 Aligned_cols=45 Identities=9% Similarity=0.173 Sum_probs=32.5
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~iA~~~Gi~~ 534 (847)
+.+.+|++.++-++.|++. |++ ..++-||++... ...|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (293)
T PRK14185 9 ISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKS 63 (293)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788888999999877 776 456679887543 45677889853
No 282
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=21.45 E-value=1.8e+02 Score=25.65 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCC
Q 003103 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLG 164 (847)
Q Consensus 101 ~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G 164 (847)
...++.++++..++.|+.-+..++...+-+++. ++|++||-|....|
T Consensus 9 ~~~ll~~vl~~~ifyFli~RPQrKr~K~~~~ml-----------------~sL~kGD~VvT~gG 55 (97)
T COG1862 9 LVLLLPLVLIFAIFYFLIIRPQRKRMKEHQELL-----------------NSLKKGDEVVTIGG 55 (97)
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH-----------------HhccCCCEEEEcCC
No 283
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=21.34 E-value=89 Score=28.54 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=22.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHH
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLA 521 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~ 521 (847)
+++.++++.+|+.|++|+.+|+++..
T Consensus 61 ~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 61 DELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 67899999999999999999997643
No 284
>PRK06769 hypothetical protein; Validated
Probab=21.30 E-value=5.5e+02 Score=24.94 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=28.2
Q ss_pred CCcchHHHHHHHHhCCCe---EEEEcCCCHHHHHHHHHHcCCC
Q 003103 494 PRHDSAETIRRALNLGVN---VKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.||+..-..+.+++.|+. ++|+ ||++ +-...|+++|+.
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~I-GD~~-~Di~aA~~aGi~ 132 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVI-GDRW-TDIVAAAKVNAT 132 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEE-cCCH-HHHHHHHHCCCe
Confidence 466655556666777764 7777 8996 788889999985
No 285
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=21.13 E-value=1.4e+02 Score=25.49 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=36.7
Q ss_pred EEecccC---CCCcchHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCC
Q 003103 486 GLLPLFD---PPRHDSAETIRRALNLGVNVKMI-TGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D---~lr~~~~~~I~~l~~aGI~v~mi-TGD~~~tA~~iA~~~Gi~ 533 (847)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 3455666 66677888999999999998888 555666677778888874
No 286
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase, eukaryotic type. This protein is an FAD-containing flavoprotein.
Probab=20.67 E-value=2.4e+02 Score=30.14 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=34.2
Q ss_pred CceEEEEecccCCCCcchHHHHHHHHhCCCe-EEEEcCCCHH
Q 003103 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLA 521 (847)
Q Consensus 481 ~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~-v~miTGD~~~ 521 (847)
++..+--+..+|.-|.+..+.+..++++||+ +..+|||.+.
T Consensus 59 g~~~i~Hltcr~~~~~~l~~~L~~~~~~Gi~niLal~GD~p~ 100 (281)
T TIGR00677 59 GVETCMHLTCTNMPIEMIDDALERAYSNGIQNILALRGDPPH 100 (281)
T ss_pred CCCeeEEeccCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 4556666777888888999999999999998 8899999963
No 287
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=20.66 E-value=1.1e+02 Score=28.71 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=52.4
Q ss_pred HHHHHccCeEEEEEeeecCCCC-CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcC-CCHHHHHHHHHH
Q 003103 453 DKFAERGLRSLGVARQEIPEKT-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITG-DQLAIGKETGRR 529 (847)
Q Consensus 453 ~~~~~~G~rvl~~a~~~~~~~~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~v~miTG-D~~~tA~~iA~~ 529 (847)
.-|...|+.|+......-+++- +...+.+-..+|+-++...--+..++.++.|+++|. ++.++-| -.+..-..--++
T Consensus 24 ~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~ 103 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKE 103 (132)
T ss_pred HHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHH
Confidence 3467789999877654322111 112244557899999888888899999999999887 4434444 344333445677
Q ss_pred cCCC
Q 003103 530 LGMG 533 (847)
Q Consensus 530 ~Gi~ 533 (847)
+|+.
T Consensus 104 ~Gvd 107 (132)
T TIGR00640 104 MGVA 107 (132)
T ss_pred CCCC
Confidence 7874
No 288
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=20.39 E-value=3e+02 Score=29.70 Aligned_cols=105 Identities=22% Similarity=0.275 Sum_probs=58.4
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeE
Q 003103 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (847)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (847)
+.+-|.+|- .+.|+++|++|.+|.++|--...-|...+.. .|++- -.=.|+..+--+....++. -.-.+.
T Consensus 161 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~vD~-----~~GiGGaPEGVlaAaAlkc--lGG~mq 231 (319)
T PRK09479 161 VVVLDRPRH--EELIAEIREAGARVKLISDGDVAGAIATAFPDTGVDI-----LMGIGGAPEGVLAAAALKC--LGGEMQ 231 (319)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCeeE-----EEEcCcChHHHHHHHHHHh--cCceeE
Confidence 345566665 5899999999999999996566556555521 22210 0001111100000000000 012357
Q ss_pred EEeChhhHHHHHHHHhhcC----------------CEEEEEcCCcCChhhhh
Q 003103 567 AGVFPEHKYEIVKRLQERK----------------HICGMTGDGVNDAPALK 602 (847)
Q Consensus 567 ar~sP~qK~~iV~~lq~~g----------------~~V~miGDG~ND~~aLk 602 (847)
+|.-|+...+.-++ ++.| ..|.++.-|+.|...|+
T Consensus 232 gRL~~~~~~e~~r~-~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 232 GRLLPRNEEERARA-KKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred EeECCCCHHHHHHH-HHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 78777665554333 3333 37889999999999887
No 289
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=20.29 E-value=2.2e+02 Score=28.65 Aligned_cols=85 Identities=18% Similarity=0.146 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHccCeEEEEEeeecCCCCCCCCC-CCc--eEEEEecccCC--CCcchHHHHHHHHhCCCe---EEEEcCC
Q 003103 447 KVHAVIDKFAERGLRSLGVARQEIPEKTKESPG-APW--QLVGLLPLFDP--PRHDSAETIRRALNLGVN---VKMITGD 518 (847)
Q Consensus 447 ~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e-~~l--~~lG~i~~~D~--lr~~~~~~I~~l~~aGI~---v~miTGD 518 (847)
...+.++.+.++|+++..++-..-.. ....++ .++ -|-.+++-+|- .||+..--...+++.|+. ++|+ ||
T Consensus 98 g~~~~L~~L~~~g~~~~i~Tn~~~~~-~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i-gD 175 (221)
T TIGR02253 98 GVRDTLMELRESGYRLGIITDGLPVK-QWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV-GD 175 (221)
T ss_pred CHHHHHHHHHHCCCEEEEEeCCchHH-HHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE-CC
Confidence 34566777778888755554332110 000000 011 12222322222 355555555666777774 5666 99
Q ss_pred CHHHHHHHHHHcCCC
Q 003103 519 QLAIGKETGRRLGMG 533 (847)
Q Consensus 519 ~~~tA~~iA~~~Gi~ 533 (847)
++..-...|++.|+.
T Consensus 176 s~~~di~~A~~aG~~ 190 (221)
T TIGR02253 176 RLDKDIKGAKNLGMK 190 (221)
T ss_pred ChHHHHHHHHHCCCE
Confidence 998888899999985
No 290
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=20.20 E-value=2.1e+02 Score=25.79 Aligned_cols=42 Identities=19% Similarity=0.128 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCC
Q 003103 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGD 165 (847)
Q Consensus 107 ~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~ 165 (847)
++++..++-++.-+..+|..++.+++ .++|+|||-|....|-
T Consensus 24 lvii~~i~yf~~~RpqkK~~k~~~~~-----------------~~~Lk~Gd~VvT~gGi 65 (106)
T PRK05585 24 LVVFFAIFYFLIIRPQQKRQKEHKKM-----------------LSSLAKGDEVVTNGGI 65 (106)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHH-----------------HHhcCCCCEEEECCCe
Confidence 34444455566666666665554432 2579999999887763
No 291
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.15 E-value=2e+02 Score=30.78 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=32.0
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHcCCCC
Q 003103 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------GKETGRRLGMGT 534 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~t------A~~iA~~~Gi~~ 534 (847)
+.+.+|++.++.++.+++. |++ +.++-||++.. -...|+++||..
T Consensus 9 va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (282)
T PRK14180 9 LSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDS 63 (282)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788889999999876 765 46667888754 344567788853
Done!