Your job contains 1 sequence.
>003106
MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFW
DIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQQQQQQQQQQQQSQQPPHQQQQQQQQ
QQQQLQMQQILLQRHAQQQQQHQQQHQQQQQQQQQPPQQPQQQQPQQQQQRRDGAHLLNG
NTNGLLGNDSLMRQNPGTANAMATRMYEEKLKLPVLRDSLDDAAMKQRFGENMGQLLDPN
HASYIKSAAATGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRAAGPE
GSLMGIPGSNQGGNNLTLKGWPLTGLEPLRSGLLQQQKPFIQAPQPFHQIQMLTPQHQQL
LLAQQNLTSPSASDESRRFRMLLNNRSMSLGKDGLSNSVGDVVSNVGSPLPAGGHLLPRG
DTDMLIKLKMAQMHQQQQQQQQQQQQNSNPQQHTLSNQQSQSSNHNLHQQDKMGPAGSVT
LDGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPG
DVISMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDN
VESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDK
KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM
GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWCVNAMNRPCL
WDKLDAGDIQISDSLFINANIFCGLGWYGSDEIPAPSWKVSCRSCRECCLYTGCGDSSLS
SFIAGTY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003106
(847 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 218 2.5e-15 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 204 1.2e-13 1
UNIPROTKB|E1BR73 - symbol:APAF1 "Uncharacterized protein"... 214 1.7e-13 1
UNIPROTKB|F1P1P3 - symbol:APAF1 "Uncharacterized protein"... 214 1.7e-13 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 207 5.3e-13 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 180 8.1e-13 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 180 8.1e-13 1
UNIPROTKB|E1BS49 - symbol:APAF1 "Uncharacterized protein"... 207 9.9e-13 1
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 206 1.3e-12 1
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 202 3.4e-12 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 189 4.0e-12 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 193 5.0e-12 1
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 199 5.4e-12 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 193 5.6e-12 1
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 199 7.2e-12 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 194 9.8e-12 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 190 1.1e-11 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 188 1.8e-11 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 188 1.8e-11 1
UNIPROTKB|F1MUW4 - symbol:APAF1 "Uncharacterized protein"... 195 2.0e-11 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 186 2.0e-11 1
UNIPROTKB|D6RFX4 - symbol:GNB2L1 "Guanine nucleotide-bind... 167 2.0e-11 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 191 2.3e-11 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 184 2.4e-11 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 189 2.8e-11 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 163 5.4e-11 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 180 8.7e-11 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 180 8.7e-11 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 180 8.7e-11 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 180 8.9e-11 2
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 180 9.1e-11 2
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 179 9.1e-11 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 186 9.7e-11 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 185 9.9e-11 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 181 1.0e-10 1
SGD|S000004212 - symbol:UTP13 "Nucleolar protein" species... 186 1.0e-10 1
UNIPROTKB|F1NIY8 - symbol:F1NIY8 "Uncharacterized protein... 179 1.3e-10 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 182 1.4e-10 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 176 1.5e-10 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 184 1.6e-10 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 185 1.6e-10 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 176 1.9e-10 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 181 1.9e-10 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 176 2.1e-10 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 176 2.1e-10 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 176 2.1e-10 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 176 2.1e-10 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 176 2.1e-10 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 176 2.1e-10 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 194 2.2e-10 2
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 177 2.4e-10 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 180 2.7e-10 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 156 3.0e-10 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 156 3.0e-10 1
UNIPROTKB|Q4VXH1 - symbol:FBXW2 "F-box/WD repeat-containi... 156 3.0e-10 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 181 3.5e-10 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 181 3.5e-10 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 181 3.5e-10 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 180 3.6e-10 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 173 3.7e-10 1
ZFIN|ZDB-GENE-040426-916 - symbol:smu1 "smu-1 suppressor ... 177 4.6e-10 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 172 5.0e-10 1
WB|WBGene00010556 - symbol:rack-1 species:6239 "Caenorhab... 172 5.3e-10 1
UNIPROTKB|Q21215 - symbol:rack-1 "Guanine nucleotide-bind... 172 5.3e-10 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 179 5.5e-10 1
UNIPROTKB|C9JLV4 - symbol:APAF1 "Apoptotic protease-activ... 194 5.9e-10 2
UNIPROTKB|Q5ZME8 - symbol:SMU1 "WD40 repeat-containing pr... 176 6.0e-10 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 175 7.0e-10 1
UNIPROTKB|O14727 - symbol:APAF1 "Apoptotic protease-activ... 194 7.1e-10 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 176 7.4e-10 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 178 7.4e-10 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 173 7.9e-10 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 181 8.2e-10 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 173 8.3e-10 1
UNIPROTKB|Q2TBS9 - symbol:SMU1 "WD40 repeat-containing pr... 174 9.9e-10 1
UNIPROTKB|Q2TAY7 - symbol:SMU1 "WD40 repeat-containing pr... 174 9.9e-10 1
MGI|MGI:1915546 - symbol:Smu1 "smu-1 suppressor of mec-8 ... 174 9.9e-10 1
RGD|620694 - symbol:Smu1 "smu-1 suppressor of mec-8 and u... 174 9.9e-10 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 171 1.0e-09 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 171 1.0e-09 1
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 175 1.0e-09 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 172 1.1e-09 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 171 1.3e-09 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 192 1.4e-09 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 176 1.4e-09 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 169 1.6e-09 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 170 1.7e-09 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 169 1.7e-09 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 167 1.8e-09 1
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 167 1.8e-09 1
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 167 1.8e-09 1
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 167 1.8e-09 1
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 167 1.8e-09 1
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 167 1.8e-09 1
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 167 1.8e-09 1
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 167 1.8e-09 1
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 167 1.8e-09 1
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 167 1.8e-09 1
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 167 1.9e-09 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 168 2.0e-09 1
WARNING: Descriptions of 759 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 218 (81.8 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
++ ++ T+ + C FS+DG LLA+ DK +LW E HSS I+D+
Sbjct: 33 YRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLA 92
Query: 688 FSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE 747
+S ++S D T+R+WDA +P L+ GH+ V ++F+P +LI S D
Sbjct: 93 WSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP-PSNLIVSGSFDET 151
Query: 748 IRYWSINNGSCTRVFKVES 766
IR W + G C R+ K S
Sbjct: 152 IRIWEVKTGKCVRMIKAHS 170
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 634 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 693
+R T+ V C +F+ L+ +G D+ +W T K ++ HS I+ V F+
Sbjct: 124 LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS 183
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL-DFHPN-KDDLICSCDGDGEI--- 748
+ ++S D + ++WDA G L+T + + +S F PN K L+ + D ++
Sbjct: 184 LIVSASHDGSCKIWDAKE-GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY 242
Query: 749 ---RYWSINNGSCTRVFKVES-FCC----WCVNAMNRPC--LWDKLDAGDI 789
++ + G +VF + S F + V+ C LWD L A +I
Sbjct: 243 ATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD-LQARNI 292
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 41/121 (33%), Positives = 65/121 (53%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DGK LA+ DK +W K + LE H I+D+ +S + ++S DKT++
Sbjct: 54 FSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIK 113
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
+WD ++ G ++T GH V + F+P + +LI S D +R W +N G CT++
Sbjct: 114 IWDVES-GKMVKTLKGHKEYVFGVSFNP-QSNLIVSGSFDENVRIWDVNTGECTKMISAH 171
Query: 766 S 766
S
Sbjct: 172 S 172
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 40/153 (26%), Positives = 65/153 (42%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DV G K +++ V F+ L+ +G D+ +W +T + + HS
Sbjct: 116 DVESG---KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHS 172
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
+T V F+ + + S+D TVR+WD G L T +S + F PN +
Sbjct: 173 DPVTGVHFNRDGTLVVSGSYDGTVRIWDTTT-GQLLNTISTEDGKEVSFVKFSPN-GKFV 230
Query: 740 CSCDGDGEIRYWSINNGS-CTRVF---KVESFC 768
+ D +R WS NN C + + K E +C
Sbjct: 231 LAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYC 263
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L+ H I+ V+FSP LA++S DKT+++W A + + RT GH + + +
Sbjct: 39 KYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE-RTLEGHKEGISDIAWS 97
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+ LICS D I+ W + +G + K
Sbjct: 98 QDSK-LICSASDDKTIKIWDVESGKMVKTLK 127
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 214 (80.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/194 (28%), Positives = 94/194 (48%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVR 635
W +K L+ ++ RLV D + S D G + + V + S + +
Sbjct: 596 WINKK-SLK-NLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEIS 653
Query: 636 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR- 694
A +++CC FS+D K +AT DKK +W++ T K EEH+ + +F+ +
Sbjct: 654 AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQY 713
Query: 695 -LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LAT S D +++WD + Y T GH +V F PN DD I SC DG ++ W++
Sbjct: 714 LLATCSDDTYIKLWDLKDK-YCRNTMFGHVNAVSHCRFSPN-DDYIASCSTDGTVKLWNV 771
Query: 754 NNGSCTRVFKVESF 767
++ + R +++ F
Sbjct: 772 HSANELRTIEIKDF 785
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/187 (26%), Positives = 74/187 (39%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S A + V C F++D + L + HD +W+ L L+ H I D F +
Sbjct: 1000 SREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQ-LNECVFLKGHKEAIKDFAFLENS 1058
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+L + SFD TV+VW+ G + + F H +V+S P+ S D + WS
Sbjct: 1059 -KLLSWSFDGTVKVWNITT-GKTEKDFACHRGAVLSCAVSPD-GSRFSSTSADKTAKIWS 1115
Query: 753 INNGSCTRVFKVESFCCWC-VNAMNRPCLWDKLDAGDIQISDSLFINANIFCGLGWYGSD 811
+ S K C C + + L D GDI+I D L FC +
Sbjct: 1116 FESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEE 1175
Query: 812 EIPAPSW 818
E W
Sbjct: 1176 EPTHGGW 1182
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 214 (80.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/194 (28%), Positives = 94/194 (48%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVR 635
W +K L+ ++ RLV D + S D G + + V + S + +
Sbjct: 597 WINKK-SLK-NLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEIS 654
Query: 636 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR- 694
A +++CC FS+D K +AT DKK +W++ T K EEH+ + +F+ +
Sbjct: 655 AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQY 714
Query: 695 -LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LAT S D +++WD + Y T GH +V F PN DD I SC DG ++ W++
Sbjct: 715 LLATCSDDTYIKLWDLKDK-YCRNTMFGHVNAVSHCRFSPN-DDYIASCSTDGTVKLWNV 772
Query: 754 NNGSCTRVFKVESF 767
++ + R +++ F
Sbjct: 773 HSANELRTIEIKDF 786
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/187 (26%), Positives = 74/187 (39%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S A + V C F++D + L + HD +W+ L L+ H I D F +
Sbjct: 1001 SREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQ-LNECVFLKGHKEAIKDFAFLENS 1059
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+L + SFD TV+VW+ G + + F H +V+S P+ S D + WS
Sbjct: 1060 -KLLSWSFDGTVKVWNITT-GKTEKDFACHRGAVLSCAVSPD-GSRFSSTSADKTAKIWS 1116
Query: 753 INNGSCTRVFKVESFCCWC-VNAMNRPCLWDKLDAGDIQISDSLFINANIFCGLGWYGSD 811
+ S K C C + + L D GDI+I D L FC +
Sbjct: 1117 FESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEE 1176
Query: 812 EIPAPSW 818
E W
Sbjct: 1177 EPTHGGW 1183
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 207 (77.9 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 47/134 (35%), Positives = 67/134 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D K L + DK LW DT + + + H+ + DV+FSP T+S D+T R
Sbjct: 525 FSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTAR 584
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF--K 763
+W D+ Y LR F GH V ++FHPN + + + D R W ++ G+C RVF
Sbjct: 585 LWATDHI-YPLRIFAGHINDVDCVEFHPNSN-YVFTGSSDKTCRMWDVHTGNCVRVFLGH 642
Query: 764 VESFCCWCVNAMNR 777
S C V+ R
Sbjct: 643 TNSVNCLAVSPDGR 656
Score = 154 (59.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 42/124 (33%), Positives = 57/124 (45%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S + T V FS G T HD+ A LW TD + H + + V F P+
Sbjct: 554 SYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNS 613
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+ T S DKT R+WD + G +R F+GH+ SV L P+ + S DG I W
Sbjct: 614 NYVFTGSSDKTCRMWDV-HTGNCVRVFLGHTNSVNCLAVSPD-GRWLASGGEDGIICVWD 671
Query: 753 INNG 756
I +G
Sbjct: 672 IGSG 675
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 180 (68.4 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 91 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 133 (51.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
D TV++WD G + F GH+ V ++FHPN + L+ S D
Sbjct: 168 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSD 210
Score = 122 (48.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LTAGKMMSEF 185
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 180 (68.4 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 35 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 94
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 95 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 152
Query: 768 CCWCV 772
C+
Sbjct: 153 AVRCL 157
Score = 131 (51.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 112 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 171
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNK 735
D TV++WD G + F GH+ V ++FHPN+
Sbjct: 172 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNE 205
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 62 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 121
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 122 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 179
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 180 LTAGKMMSEF 189
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 207 (77.9 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 58/198 (29%), Positives = 95/198 (47%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVR 635
W +K L+ ++ RLV D + S D G + + V + S + +
Sbjct: 596 WINKK-SLK-NLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEIS 653
Query: 636 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR- 694
A +++CC FS+D K +AT DKK +W++ T K EEH+ + +F+ +
Sbjct: 654 AHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQY 713
Query: 695 -LATSSFD----KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
LAT S D TV++WD + Y T GH +V F PN DD I SC DG ++
Sbjct: 714 LLATCSDDTYIKNTVQLWDLKDK-YCRNTMFGHVNAVSHCRFSPN-DDYIASCSTDGTVK 771
Query: 750 YWSINNGSCTRVFKVESF 767
W++++ + R +++ F
Sbjct: 772 LWNVHSANELRTIEIKDF 789
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/187 (26%), Positives = 74/187 (39%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S A + V C F++D + L + HD +W+ L L+ H I D F +
Sbjct: 1004 SREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQ-LNECVFLKGHKEAIKDFAFLENS 1062
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+L + SFD TV+VW+ G + + F H +V+S P+ S D + WS
Sbjct: 1063 -KLLSWSFDGTVKVWNITT-GKTEKDFACHRGAVLSCAVSPD-GSRFSSTSADKTAKIWS 1119
Query: 753 INNGSCTRVFKVESFCCWC-VNAMNRPCLWDKLDAGDIQISDSLFINANIFCGLGWYGSD 811
+ S K C C + + L D GDI+I D L FC +
Sbjct: 1120 FESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEE 1179
Query: 812 EIPAPSW 818
E W
Sbjct: 1180 EPTHGGW 1186
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVRASTSKVICCH 645
++ RLV D + S D G + + V + + ++ ++A +V+CC
Sbjct: 605 NLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCA 664
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL--ATSSFDKT 703
FSSD +AT DKK +W + T K EEHS + F+ L AT S D
Sbjct: 665 FSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSF 724
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+++WD N T GH+ SV F P+ D+L+ SC DG ++ W + + + +
Sbjct: 725 LKLWDL-NQKECRNTMFGHTNSVTHCRFSPD-DELLASCSADGTLKLWDVRSANEKKSIN 782
Query: 764 VESF 767
V+ F
Sbjct: 783 VKRF 786
Score = 136 (52.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 45/178 (25%), Positives = 87/178 (48%)
Query: 579 DKDLEL-RADM-DRLVEDGSLDDNVE--SFLSHDDTDPRDAGGRGMDVSQGFSFKEANSV 634
DK L++ +A+ ++L++ + +D V +F S D + + + + + K ++
Sbjct: 636 DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTY 695
Query: 635 RASTSKVICCHFS--SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+ +V CCHF+ S+ LLATG +D LW + + + + H++ +T RFSP
Sbjct: 696 EEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDD 755
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLI---CSCDGDGE 747
LA+ S D T+++WD + + + +S + P ++I CS DG+
Sbjct: 756 ELLASCSADGTLKLWDVRSANE--KKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD 811
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 202 (76.2 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVRASTSKVICCH 645
++ RLV D + S D G + + V + + ++ ++A +V+CC
Sbjct: 605 NLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCA 664
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL--ATSSFDKT 703
FSSD +AT DKK +W + T K +EHS + F+ L AT S D
Sbjct: 665 FSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+++WD N T GH+ SV F P+ D+L+ SC DG +R W + + + +
Sbjct: 725 LKLWDL-NQKECRNTMFGHTNSVNHCRFSPD-DELLASCSADGTLRLWDVRSANERKSIN 782
Query: 764 VESF 767
V+ F
Sbjct: 783 VKRF 786
Score = 136 (52.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 46/178 (25%), Positives = 86/178 (48%)
Query: 579 DKDLEL-RADM-DRLVEDGSLDDNVE--SFLSHDDTDPRDAGGRGMDVSQGFSFKEANSV 634
DK L++ +A+ ++L++ + +D V +F S D + + + + + K ++
Sbjct: 636 DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY 695
Query: 635 RASTSKVICCHFS--SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+ +V CCHF+ S+ LLATG +D LW + + + + H++ + RFSP
Sbjct: 696 DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD 755
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLI---CSCDGDGE 747
LA+ S D T+R+WD + R + +S + P ++I CS DG+
Sbjct: 756 ELLASCSADGTLRLWDVRSANE--RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD 811
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 189 (71.6 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 45/130 (34%), Positives = 65/130 (50%)
Query: 631 ANSVRASTSKVICCHFSSDGKLLATGGHDKKAVL-WHTDTLKSKTNLEEHSSLITDVRFS 689
+ +++ S S+V ++D KLLAT GH + T + E H +T V F
Sbjct: 25 SRTIQHSDSQVNRLEITNDKKLLATAGHQNVRLYDIRTTNPNPVASFEGHRGNVTSVSFQ 84
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+ TSS D T++VWD +P R + H+A V + HPN+ +LI SCD DG IR
Sbjct: 85 QDNRWMVTSSEDGTIKVWDVRSPSIP-RNYK-HNAPVNEVVIHPNQGELI-SCDRDGNIR 141
Query: 750 YWSINNGSCT 759
W + CT
Sbjct: 142 IWDLGENQCT 151
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 42/137 (30%), Positives = 59/137 (43%)
Query: 647 SSDGKLLATGGHDKKAVLW----HTDT--LKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
+SDG +LA +W HTD LK T HS+ IT + S + LAT S
Sbjct: 168 ASDGSMLAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCSA 227
Query: 701 DKTVRVWDADNPGYSLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
D T RVW D+ + L T + GH V F + L+ + D +R W ++
Sbjct: 228 DHTARVWSIDDD-FKLETTLDGHQRWVWDCAFSADSAYLV-TASSDHYVRLWDLSTREIV 285
Query: 760 RVFKVESFCCWCVNAMN 776
R + CV A+N
Sbjct: 286 RQYGGHHKGAVCV-ALN 301
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 193 (73.0 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 45/128 (35%), Positives = 63/128 (49%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
++ R T++++C F+ L+ATG D A LW + L HS+ I + F+ S
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTS 230
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRY 750
R+ T SFD TV VWDAD G + +GH A + S F N D LI + D +
Sbjct: 231 GDRIITGSFDHTVVVWDADT-GRKVNILIGHCAEISSASF--NWDCSLILTGSMDKTCKL 287
Query: 751 WSINNGSC 758
W NG C
Sbjct: 288 WDATNGKC 295
Score = 173 (66.0 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 627 SFKEANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITD 685
S +E N++ + V F++ G +ATG DK LW +T K H++ I
Sbjct: 123 SGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVC 182
Query: 686 VRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
+ F+P +AT S D T ++WD N G + T GHSA ++SL F+ + D +I D
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQN-GEEVYTLRGHSAEIISLSFNTSGDRIITG-SFD 240
Query: 746 GEIRYWSINNGS--------CTRVFKVE-SFCCWCV--NAMNRPC-LWD 782
+ W + G C + ++ C + +M++ C LWD
Sbjct: 241 HTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWD 289
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/111 (31%), Positives = 58/111 (52%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS-PSMPRLATSSFDKTVR 705
+ G TG +D+ LW T + + LE H +++ + F+ P ++AT SFDKT +
Sbjct: 101 NKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+W + G TF GH+A ++ L F+P + L+ + D + W I NG
Sbjct: 161 LWSVET-GKCYHTFRGHTAEIVCLSFNP-QSTLVATGSMDTTAKLWDIQNG 209
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 610 TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT 669
T D + D+ G +E ++R ++++I F++ G + TG D V+W DT
Sbjct: 194 TGSMDTTAKLWDIQNG---EEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT 250
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
+ L H + I+ F+ + T S DKT ++WDA N G + T GH ++
Sbjct: 251 GRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN-GKCVATLTGHDDEILDS 309
Query: 730 DF-HPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
F + K LI + DG R +S C + K+E
Sbjct: 310 CFDYTGK--LIATASADGTARIFSAATRKC--IAKLE 342
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 36/106 (33%), Positives = 51/106 (48%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F GKL+AT D A ++ T K LE H I+ + F+P L T S DKT R
Sbjct: 311 FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTAR 370
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+WDA G L+ GH+ + S F+ K +++ + D R W
Sbjct: 371 IWDAQT-GQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNTCRIW 414
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/144 (25%), Positives = 58/144 (40%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
++ N + +++ F+ D L+ TG DK LW K L H I D F
Sbjct: 252 RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCF 311
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
+ +AT+S D T R++ A + GH + + F+P + L+ D
Sbjct: 312 DYTGKLIATASADGTARIFSAATRK-CIAKLEGHEGEISKISFNPQGNHLLTG-SSDKTA 369
Query: 749 RYWSINNGSCTRVFKV---ESFCC 769
R W G C +V + E F C
Sbjct: 370 RIWDAQTGQCLQVLEGHTDEIFSC 393
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 199 (75.1 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 50/184 (27%), Positives = 88/184 (47%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVRASTSKVICCH 645
++ RLV D + S D G + + V + + ++ ++A +V+CC
Sbjct: 341 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 400
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL--ATSSFDKT 703
FS+D + +AT DKK +W++ T + + +EHS + F+ + L AT S D
Sbjct: 401 FSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYF 460
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+++WD N T GH+ SV F P+ D L+ SC DG ++ W + + + +
Sbjct: 461 LKLWDL-NQKECRNTMFGHTNSVSHCRFSPD-DKLLASCSADGTLKLWDVKSANERKSIN 518
Query: 764 VESF 767
V+ F
Sbjct: 519 VKQF 522
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 193 (73.0 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 64/219 (29%), Positives = 95/219 (43%)
Query: 549 PHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHD 608
P SG + L + SP+ QL + + D SL +E
Sbjct: 70 PASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASD-SLKHTMEGHSDRV 128
Query: 609 DTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD 668
++ G+ + + G S K +++ + V+ FS DG+LLA+G +K LW +
Sbjct: 129 ESVAFSPNGQLWNPAIG-SLK--HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSA 185
Query: 669 TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR-TFMGHSASVM 727
T K L HS+ + + FSP LA+ S D T+++WD P SL+ T GHS +
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDP--PSGSLKHTLEGHSNKIE 243
Query: 728 SLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES 766
SL F PN L+ S D I+ W GS K S
Sbjct: 244 SLAFSPN-GQLLASGSSDATIKLWDTATGSFRHTLKGHS 281
Score = 182 (69.1 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 42/111 (37%), Positives = 59/111 (53%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DG+LLA+G +D LW + K LE HS+ I + FSP+ LA+ S D T++
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIK 264
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD + T GHS V+S+ F P+ L+ S GD I+ W G
Sbjct: 265 LWDTATGSFR-HTLKGHSDMVLSVVFSPDSQ-LLESGSGDNTIKLWDPATG 313
Score = 159 (61.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DG+LLA+G +D LW + K LE HSS + V FSP+ LA+ S D T++
Sbjct: 49 FSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIK 108
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPN 734
+W++ + T GHS V S+ F PN
Sbjct: 109 LWNSASDSLK-HTMEGHSDRVESVAFSPN 136
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
+++ ++K+ FS +G+LLA+G D LW T T + L+ HS ++ V FSP
Sbjct: 233 HTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPD 292
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
L + S D T+++WD G L+ M V S++F LI + G I+ W
Sbjct: 293 SQLLESGSGDNTIKLWDPAT-GI-LKHSMRTPGIVRSIEFSIELPQLITNL-GTFSIQAW 349
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 676 LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNK 735
LE HS I V FSP LA+ S D T+++WD + G +T GHS+SV S+ F PN
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK-QTLEGHSSSVQSVAFSPN- 94
Query: 736 DDLICSCDGDGEIRYWS 752
L+ S D I+ W+
Sbjct: 95 GQLLASGSSDTTIKLWN 111
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 199 (75.1 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 50/184 (27%), Positives = 88/184 (47%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVRASTSKVICCH 645
++ RLV D + S D G + + V + + ++ ++A +V+CC
Sbjct: 605 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 664
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL--ATSSFDKT 703
FS+D + +AT DKK +W++ T + + +EHS + F+ + L AT S D
Sbjct: 665 FSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYF 724
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+++WD N T GH+ SV F P+ D L+ SC DG ++ W + + + +
Sbjct: 725 LKLWDL-NQKECRNTMFGHTNSVSHCRFSPD-DKLLASCSADGTLKLWDVKSANERKSIN 782
Query: 764 VESF 767
V+ F
Sbjct: 783 VKQF 786
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 194 (73.4 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D K L +G DK LW DT + + + H+ + DV FSP AT+S D+T R
Sbjct: 533 FSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTAR 592
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
+W D+ Y LR F GH V + FHPN + + D R W ++ G R+F
Sbjct: 593 LWSCDHI-YPLRIFAGHLNDVDCVSFHPN-GCYVFTGSSDKTCRMWDVSTGDSVRLF 647
Score = 50 (22.7 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 20/72 (27%), Positives = 28/72 (38%)
Query: 224 AMKQRFGENMGQLLDPNHASYIKSAAATGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPD 283
+ KQ +N P ++ A G SGQ + G S Q Q RS P S D
Sbjct: 2 SQKQSTNQNQNGTHQPQPVKNQRTNNAAGANSGQQPQQQSQGQSQQ-QGRSNG-PFSASD 59
Query: 284 IKSEINPVLNPR 295
+ + LN +
Sbjct: 60 LNRIVLEYLNKK 71
Score = 43 (20.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 496 SKNQTGRKRKQPVSSSGPANSSG 518
++NQ G + QPV + N++G
Sbjct: 8 NQNQNGTHQPQPVKNQRTNNAAG 30
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 190 (71.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 43/111 (38%), Positives = 57/111 (51%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + +T RF P+ +AT S D+TVR
Sbjct: 549 FSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVR 608
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN + S DG + W I +G
Sbjct: 609 LWDVLN-GNCVRIFTGHKGPIHSLAFSPN-GKFLASGSTDGRVLLWDIGHG 657
Score = 169 (64.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ + + V FS D L + D LW T + H+ + D +FS
Sbjct: 491 ESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFS 550
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
P + D+ R+W D+ Y LR F GH A V FHPN + + + D +
Sbjct: 551 PFGYYFVSGGHDRVARLWATDH--YQPLRIFAGHLADVTCTRFHPNSN-YVATGSSDRTV 607
Query: 749 RYWSINNGSCTRVF 762
R W + NG+C R+F
Sbjct: 608 RLWDVLNGNCVRIF 621
Score = 123 (48.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C F + +ATG D+ LW H I + FSP+ LA+ S
Sbjct: 586 VTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGST 645
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSI 753
D V +WD + G + GH+ ++ +L F ++D ++I S D +R W +
Sbjct: 646 DGRVLLWDIGH-GLMIAELKGHTGTIYALKF--SRDGEIIASGSIDNTVRLWDV 696
Score = 53 (23.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 279 GSTPDIKSEINPVLNPRAAGPEGSLMGIP---GSNQGGNNLTLKGWPLTGLEPLRSGLLQ 335
G D K+ ++ V AA P+ +L IP G +Q ++ L + G L
Sbjct: 116 GDAGDTKTLLSRVSIAGAAAPQSTLTPIPAKSGDDQPDVSVVLSAYSQQGDPSLYKVYYS 175
Query: 336 QQKPFIQAPQPFHQIQM 352
K FI++ H+ ++
Sbjct: 176 DLKKFIESVLDCHRAEL 192
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
++ R T++++C F+ L+ATG D A LW + + L HS+ I + F+ S
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTS 230
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRY 750
R+ T SFD TV VW+AD G + T +GH A + S F N D LI + D +
Sbjct: 231 GNRIITGSFDHTVTVWEADT-GRKVYTLIGHCAEISSAVF--NWDCSLILTGSMDKTCKL 287
Query: 751 WSINNGSC 758
W NG C
Sbjct: 288 WDAVNGKC 295
Score = 165 (63.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 39/106 (36%), Positives = 53/106 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F GKL+AT D A ++ T + T LE H I+ + F+P RL T S DKT R
Sbjct: 311 FDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTAR 370
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+WDA G L+ GH+ + S F+ K D+I + D R W
Sbjct: 371 IWDAQT-GQCLQVLEGHTDEIFSCAFN-YKGDIIITGSKDNTCRIW 414
Score = 165 (63.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS-PSMPRLATSSFDKTVR 705
+ G TG +D+ LW T + + LE H +++ + F+ P ++AT SFDKT +
Sbjct: 101 NKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+W + G TF GH+A ++ L F+P + L+ + D + W I +G
Sbjct: 161 LWSVET-GKCYHTFRGHTAEIVCLSFNP-QSTLVATGSMDTTAKLWDIQSG 209
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/174 (27%), Positives = 81/174 (46%)
Query: 627 SFKEANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITD 685
S +E +++ + V F++ G +ATG DK LW +T K H++ I
Sbjct: 123 SGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVC 182
Query: 686 VRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
+ F+P +AT S D T ++WD + G + T GHSA ++SL F+ + + +I D
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQS-GEEVFTLTGHSAEIISLSFNTSGNRIITG-SFD 240
Query: 746 GEIRYWSINNGSCTRVFKVESFCC--------W-C----VNAMNRPC-LWDKLD 785
+ W + G +V+ + C W C +M++ C LWD ++
Sbjct: 241 HTVTVWEADTGR--KVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN 292
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/157 (27%), Positives = 70/157 (44%)
Query: 610 TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT 669
T D + D+ G +E ++ ++++I F++ G + TG D +W DT
Sbjct: 194 TGSMDTTAKLWDIQSG---EEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT 250
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
+ L H + I+ F+ + T S DKT ++WDA N G + T GH ++
Sbjct: 251 GRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN-GKCVATLTGHDDEILDS 309
Query: 730 DF-HPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
F + K LI + DG R +S C V K+E
Sbjct: 310 CFDYTGK--LIATASADGTARIFSAATREC--VTKLE 342
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 36/127 (28%), Positives = 51/127 (40%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F+ D L+ TG DK LW K L H I D F + +AT+S D T R
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV- 764
++ A + GH + + F+P + L+ D R W G C +V +
Sbjct: 329 IFSAATRE-CVTKLEGHEGEISKISFNPQGNRLLTG-SSDKTARIWDAQTGQCLQVLEGH 386
Query: 765 --ESFCC 769
E F C
Sbjct: 387 TDEIFSC 393
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T+ V F G LLA+ D LW T L H ++ VRF+PS
Sbjct: 143 TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG 202
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+L +SS DKT++VW+A GY ++T +GH V + + I SC D I+ W+
Sbjct: 203 DQLISSSRDKTIKVWEAAT-GYCIKTLVGHEDWVRKITVSED-GSCIASCSNDQTIKTWN 260
Query: 753 INNGSCTRVFKVESFCCWCV 772
I G C ++ S C+
Sbjct: 261 IVKGECLATYREHSHVVECL 280
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 41/170 (24%), Positives = 75/170 (44%)
Query: 600 NVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCH--------FSSDGK 651
++E+ ++ + + GGRG +G KE R ++ H F
Sbjct: 63 DLEAKVAQLEEELNSGGGRGGGRGRG---KEDALPRPPEKHILTGHRNCINSVKFHPSFS 119
Query: 652 LLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 711
L+ + D +W ++ + + L+ H++ + D+ F + LA+ S D T+++WD
Sbjct: 120 LMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQT 179
Query: 712 PGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
Y ++T GH +V + F P+ D LI S D I+ W G C +
Sbjct: 180 --YDCVKTLHGHDHNVSCVRFTPSGDQLISS-SRDKTIKVWEAATGYCIK 226
Score = 115 (45.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
LAT S DKT+++W+ G L T++GH V ++ FHP L+ S D IR W I
Sbjct: 319 LATGSRDKTIKIWELAT-GRCLATYIGHDNWVRAVRFHPCGKFLL-SVGDDKTIRVWDIA 376
Query: 755 NGSCTR 760
G C +
Sbjct: 377 QGRCIK 382
Score = 48 (22.0 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
S DG +A+ +D+ W+ + EHS ++ + FS
Sbjct: 241 SEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 195 (73.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 50/184 (27%), Positives = 87/184 (47%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVRASTSKVICCH 645
++ RLV D + S D G + + V + + ++ ++A +V+CC
Sbjct: 607 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 666
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL--ATSSFDKT 703
FS+D K +AT DKK +W++ T + +EHS + F+ + L AT S D
Sbjct: 667 FSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYF 726
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+++WD N T GH+ SV F P+ D ++ SC DG ++ W + + + +
Sbjct: 727 LKLWDL-NQEECRNTMFGHTNSVSHCRFSPD-DQVLASCSADGTLKLWDVKSANERKSIN 784
Query: 764 VESF 767
V+ F
Sbjct: 785 VKQF 788
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 186 (70.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 42/116 (36%), Positives = 61/116 (52%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD +LL +G DK +W T KS L+ HS+ + F+P + + SFD++VR
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 181
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 182 IWDV-RTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 234
Score = 176 (67.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 42/129 (32%), Positives = 62/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 72 TKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVS 131
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
S DKT++VW+ G SL+T GHS V +F+P + +LI S D +R W + G
Sbjct: 132 GSDDKTLKVWELST-GKSLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGK 189
Query: 758 CTRVFKVES 766
C + S
Sbjct: 190 CLKTLPAHS 198
Score = 166 (63.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
++S G S K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 142 ELSTGKSLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHS 198
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 199 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 256
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 257 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 288
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 65 KFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 123
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ L+ D D ++ W ++ G + K S FCC
Sbjct: 124 SDSRLLVSGSD-DKTLKVWELSTGKSLKTLKGHSNYVFCC 162
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 167 (63.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 64 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 123
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 124 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 179
Query: 753 INNG 756
+N G
Sbjct: 180 LNEG 183
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/118 (32%), Positives = 56/118 (47%)
Query: 676 LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNK 735
L HS ++DV S + S+D T+R+WD G + R F+GH+ V+S+ F +
Sbjct: 18 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDN 76
Query: 736 DDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCW--CV----NAMNR---PCLWDKL 784
++ S D I+ W+ G C + ES W CV N+ N C WDKL
Sbjct: 77 RQIV-SGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL 132
Score = 122 (48.0 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 31 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 90
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 91 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 140
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
S G+LLATGG D + +W +L H+S + ++F+ S R+ S ++R+W
Sbjct: 31 SSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH AS+ SLDFHP + + S D I+ W + C +K +
Sbjct: 91 DLE-AAKILRTLMGHKASISSLDFHP-MGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 150 (57.9 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 566 AGTLTSPSNQLWDDKDLE-LRADMDRLVEDGSLDDN-VESFLSHDDTDPRDAGGRGMDVS 623
AG+L S S +LWD + + LR M SLD + + +L+ D + + DV
Sbjct: 80 AGSL-SGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVD---SNIKLWDVR 135
Query: 624 Q-GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSL 682
+ G F+ + T V C FS DGK LA+ D LW K T H+S
Sbjct: 136 RKGCVFR----YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA 191
Query: 683 ITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSC 742
+ V+F P+ LA+ S D+TV++WD + + + G + V S+ F+P+ L
Sbjct: 192 VNVVQFHPNEYLLASGSADRTVKLWDLEKFNM-IGSSEGETGVVRSVLFNPDGSCLYSGS 250
Query: 743 DGDGEIRYW 751
+ + W
Sbjct: 251 ENTLRVYGW 259
Score = 141 (54.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V C F+S + + G LW + K L H + I+ + F P
Sbjct: 58 SLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
LA+ S D +++WD G R + GH+ +V L F P+ L + D D ++ W
Sbjct: 118 EYLASGSVDSNIKLWDVRRKGCVFR-YKGHTQAVRCLAFSPDGKWLASASD-DSTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LIAGKMITEF 185
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS +G+ LA+ D ++W K L HS I+DV +S RL ++S DKT++
Sbjct: 47 FSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLK 106
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
VWD + G L+T GHS V DF+P +LI S D ++ W + G C +
Sbjct: 107 VWDMRS-GKCLKTLKGHSDFVFCCDFNP-PSNLIVSGSFDESVKIWEVKTGKCLKTLSAH 164
Query: 766 S 766
S
Sbjct: 165 S 165
Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 40/146 (27%), Positives = 66/146 (45%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K +++ + V CC F+ L+ +G D+ +W T K L HS I+ V
Sbjct: 112 SGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAV 171
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLICSCDGD 745
F+ + + + S+D R+WDA + G LRT +S + F PN I + D
Sbjct: 172 NFNCNGSLIVSGSYDGLCRIWDAAS-GQCLRTLADEGNPPVSFVKFSPN-GKYILTATLD 229
Query: 746 GEIRYWSINNGSCTRVF---KVESFC 768
++ W + G C + + K E +C
Sbjct: 230 NTLKLWDYSRGRCLKTYTGHKNEKYC 255
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
+ L HS+ I+ V+FSP+ LA+S+ D + +W A + G +T GHS + + +
Sbjct: 32 RLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYD-GNCKKTLYGHSLEISDVAWS 90
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ L+ + D D ++ W + +G C + K S FCC
Sbjct: 91 SDSSRLVSASD-DKTLKVWDMRSGKCLKTLKGHSDFVFCC 129
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 189 (71.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 64/222 (28%), Positives = 100/222 (45%)
Query: 544 SMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDNVES 603
S P+L + P M G + +G S +N ++ +L + DM+ + E+ + E
Sbjct: 191 SFPSLSPLDSNRHPKEM-GNNMSGNSMSMNN---NNNNLNKKPDMEEVKEEDRRRHDTEM 246
Query: 604 FLSHDDTDPRD-AGGRGMDVSQGFSFKEANSVRASTSKVICC-HFSSDGKLLATGGHDKK 661
+ D G V + ++++ ++ V+CC +FS+DGK LATG + +
Sbjct: 247 SEENGKEKGTDWLVGYNPSVQTNLNIDLLHNLQHNS--VVCCVNFSNDGKYLATGCN-RS 303
Query: 662 AVLWHTDTLKSKTNLEEHSS-----LITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 716
A ++ DT K + S I V FSP LAT + DKTV+VWD
Sbjct: 304 AQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQ- 362
Query: 717 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
TF GH + SLD+ + I S GD + + W I G C
Sbjct: 363 HTFYGHELDIYSLDYSSD-GRFIVSGSGDKKAKIWDIEKGKC 403
Score = 158 (60.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 44/141 (31%), Positives = 63/141 (44%)
Query: 621 DVSQG-FSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH 679
D+ +G +F N + V S DG+L+A G D LW T E H
Sbjct: 397 DIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH 456
Query: 680 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR---TFMGHSASVMSLDFHPNKD 736
+ V FSP LA+ S DK++++WD R TF GH V+S+ F P+
Sbjct: 457 LDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGS 516
Query: 737 DLICSCDGDGEIRYWSINNGS 757
LI S D +++W NG+
Sbjct: 517 WLI-SGSKDRSVQFWDPRNGT 536
Score = 142 (55.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE----HSSLITDVRFSPSMPRLATSSFD 701
FS DGK LA+G DK LW +S++ H + V FSP L + S D
Sbjct: 465 FSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKD 524
Query: 702 KTVRVWDADNPGYSLRTFMGHSASVMSLDFHP--NKDDLICSCDGDGEIRYWSINN 755
++V+ WD N G + GH SV+S+ P N + + GD R W ++
Sbjct: 525 RSVQFWDPRN-GTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 38 (18.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 473 MGPAGSVTLDGSMSNSFRGNDQVSKNQTGRKRKQP 507
+ P S M N+ GN N K+P
Sbjct: 195 LSPLDSNRHPKEMGNNMSGNSMSMNNNNNNLNKKP 229
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 163 (62.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 38/123 (30%), Positives = 54/123 (43%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
SV T V CC FSSDG+L A+ HD W +LK L H + V FSP
Sbjct: 59 SVSGHTGPVKCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDG 118
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
L + +D +W + G L GH+A+V S F + + + D +R W
Sbjct: 119 QWLLSGGWDNRALIWSIQS-GALLEELKGHNAAVQSSVFSSDSQS-VATGSWDRAVRVWK 176
Query: 753 INN 755
+ +
Sbjct: 177 LRD 179
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 41/141 (29%), Positives = 60/141 (42%)
Query: 623 SQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSL 682
S+ FS ++V CC FS D +LL T K LW T T K ++ H+
Sbjct: 7 SEDFSVDNIRYFSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGP 66
Query: 683 ITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSC 742
+ FS A++S D +VR W ++ T H SV ++ F P+ L+ S
Sbjct: 67 VKCCVFSSDGRLFASASHDCSVRTW-CNSSLKCTHTLTAHRRSVETVSFSPDGQWLL-SG 124
Query: 743 DGDGEIRYWSINNGSCTRVFK 763
D WSI +G+ K
Sbjct: 125 GWDNRALIWSIQSGALLEELK 145
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K +++ A V FS DG+ L +GG D +A++W + L+ H++ +
Sbjct: 95 SLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEELKGHNAAVQSS 154
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF 731
FS +AT S+D+ VRVW + GH +V L F
Sbjct: 155 VFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQGHLGNVACLCF 199
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 180 (68.4 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 91 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 155 (59.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
D TV++WD G + F GH+ V ++FHPN + L+ S D IR+W +
Sbjct: 168 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDL 218
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/117 (29%), Positives = 49/117 (41%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R + V C FS DGK LA+ D LW K + H+ + V F P+
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
LA+ S D+T+R WD + + G V S+ F+P+ L C + W
Sbjct: 204 LASGSSDRTIRFWDLEK-FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGW 259
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LTAGKMMSEF 185
Score = 53 (23.7 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 828 CCLYTGCGDS 837
CCLY+GC DS
Sbjct: 244 CCLYSGCQDS 253
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 180 (68.4 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 91 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 155 (59.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
D TV++WD G + F GH+ V ++FHPN + L+ S D IR+W +
Sbjct: 168 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDL 218
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/117 (29%), Positives = 49/117 (41%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R + V C FS DGK LA+ D LW K + H+ + V F P+
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
LA+ S D+T+R WD + + G V S+ F+P+ L C + W
Sbjct: 204 LASGSSDRTIRFWDLEK-FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGW 259
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LTAGKMMSEF 185
Score = 53 (23.7 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 828 CCLYTGCGDS 837
CCLY+GC DS
Sbjct: 244 CCLYSGCQDS 253
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 180 (68.4 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 91 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 155 (59.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
D TV++WD G + F GH+ V ++FHPN + L+ S D IR+W +
Sbjct: 168 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDL 218
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/117 (29%), Positives = 49/117 (41%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R + V C FS DGK LA+ D LW K + H+ + V F P+
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
LA+ S D+T+R WD + + G V S+ F+P+ L C + W
Sbjct: 204 LASGSSDRTIRFWDLEK-FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGW 259
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LTAGKMMSEF 185
Score = 53 (23.7 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 828 CCLYTGCGDS 837
CCLY+GC DS
Sbjct: 244 CCLYSGCQDS 253
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 180 (68.4 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 91 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 155 (59.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
D TV++WD G + F GH+ V ++FHPN + L+ S D IR+W +
Sbjct: 168 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDL 218
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/117 (29%), Positives = 49/117 (41%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R + V C FS DGK LA+ D LW K + H+ + V F P+
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
LA+ S D+T+R WD + + G V S+ F+P+ L C + W
Sbjct: 204 LASGSSDRTIRFWDLEK-FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGW 259
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LTAGKMMSEF 185
Score = 53 (23.7 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 828 CCLYTGCGDS 837
CCLY+GC DS
Sbjct: 244 CCLYSGCQDS 253
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 180 (68.4 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 91 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 155 (59.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
D TV++WD G + F GH+ V ++FHPN + L+ S D IR+W +
Sbjct: 168 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDL 218
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 34/117 (29%), Positives = 49/117 (41%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R + V C FS DGK LA+ D LW K + H+ + V F P+
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
LA+ S D+T+R WD + + G V S+ F+P+ L C + W
Sbjct: 204 LASGSSDRTIRFWDLEK-FQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGW 259
Score = 122 (48.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LTAGKMMSEF 185
Score = 53 (23.7 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 828 CCLYTGCGDS 837
CCLY+GC DS
Sbjct: 244 CCLYSGCQDS 253
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 179 (68.1 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 38/124 (30%), Positives = 63/124 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
++ FSSDG LA+ G+D++ LW+ ++ L+ H I +V+F+ L ++
Sbjct: 38 EIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSA 97
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
DKTVRVWD + G +R F H+ V S+D + +ICS DG + + +
Sbjct: 98 GTDKTVRVWDMET-GSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEA 156
Query: 759 TRVF 762
+ F
Sbjct: 157 AKKF 160
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 667 TDTLKSKTN-LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSAS 725
T +L + T L+ H I +FS LA++ +D+ + +W+ + GH +
Sbjct: 22 TSSLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGA 81
Query: 726 VMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWCVNAMNR-P-CLWDK 783
+M + F+ + L+ S D +R W + GSC R FK + V+ R P +
Sbjct: 82 IMEVKFNADSSHLV-SAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSA 140
Query: 784 LDAGDIQISD 793
D G + + D
Sbjct: 141 SDDGTVMVHD 150
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 186 (70.5 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 43/111 (38%), Positives = 56/111 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + +T RF P+ +AT S D+TVR
Sbjct: 573 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVR 632
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN L DG + W I +G
Sbjct: 633 LWDVLN-GNCVRIFTGHKGPIHSLAFSPNGRFLATGAT-DGRVLLWDIGHG 681
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/118 (32%), Positives = 53/118 (44%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D L + D LW T + H+ + D +FSP + D+ R
Sbjct: 531 FSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVAR 590
Query: 706 VWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
+W D+ Y LR F GH A V FHPN + I + D +R W + NG+C R+F
Sbjct: 591 LWATDH--YQPLRIFAGHLADVTCTRFHPNSN-YIATGSADRTVRLWDVLNGNCVRIF 645
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 185 (70.2 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 41/128 (32%), Positives = 64/128 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G A+ HD+ A +W D ++ + H S + V++ P+ +AT S DKTVR
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVR 527
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
+WD G +R F+GH + V+SL P+ + S D DG I W ++ C
Sbjct: 528 LWDVQT-GECVRIFIGHRSMVLSLAMSPD-GRYMASGDEDGTIMMWDLSTARCITPLMGH 585
Query: 766 SFCCWCVN 773
+ C W ++
Sbjct: 586 NSCVWSLS 593
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G + + D LW T + + H+ + D +FSP A+ S D+T R
Sbjct: 426 FSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTAR 485
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
+W D LR GH + V + +HPN + I + D +R W + G C R+F
Sbjct: 486 IWSMDRI-QPLRIMAGHLSDVDCVQWHPNCN-YIATGSSDKTVRLWDVQTGECVRIF 540
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 34/127 (26%), Positives = 56/127 (44%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
S V C + + +ATG DK LW T + H S++ + SP +A+
Sbjct: 503 SDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASG 562
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
D T+ +WD + MGH++ V SL + + L+ S D ++ W + S
Sbjct: 563 DEDGTIMMWDLST-ARCITPLMGHNSCVWSLSYS-GEGSLLASGSADCTVKLWDVT--SS 618
Query: 759 TRVFKVE 765
T++ K E
Sbjct: 619 TKLTKAE 625
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ RA T+ V HF SDG+ L T DK +W T K +L +H + + RFS
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFS 154
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + ++S DKTV++WD + + ++ H V +DFHP+ I + D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWDKTSRE-CVHSYCEHGGFVTYVDFHPS-GTCIAAASMDNTVK 212
Query: 750 YWSINNGSCTRVFKVESFCCWCVNAMN 776
W + + +++ S VNA++
Sbjct: 213 VWDVRTHRLLQHYQLHSAA---VNALS 236
Score = 156 (60.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 38/107 (35%), Positives = 54/107 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS + K LA+G D ++WH H +T V FSPS LA+ S DKTVR
Sbjct: 27 FSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+W + G S F H+A+V S+ F + L+ + D D ++ WS
Sbjct: 87 IWIPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTASD-DKTVKVWS 131
Score = 147 (56.8 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 39/128 (30%), Positives = 55/128 (42%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C +FS G LLA+G DK +W + T H++ + V F L T+S
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASD 123
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DKTV+VW + L + H V F P+ LI S D ++ W + C
Sbjct: 124 DKTVKVWSTHRQKF-LFSLSQHINWVRCARFSPD-GRLIVSASDDKTVKLWDKTSREC-- 179
Query: 761 VFKVESFC 768
V S+C
Sbjct: 180 ---VHSYC 184
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 186 (70.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
S + + AT +DK +W+ + + + L H + DV F LATSS DKTV++
Sbjct: 500 SPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKI 559
Query: 707 WDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
W D +S ++T GH+ +V F NK + SC DG I+ W ++G C +
Sbjct: 560 WSLDT--FSVMKTLEGHTNAVQRCSFI-NKQKQLISCGADGLIKIWDCSSGECLKTLDGH 616
Query: 766 SFCCWCVNAMN 776
+ W ++ MN
Sbjct: 617 NNRLWALSTMN 627
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F KLLAT DK +W DT LE H++ + F +L + D ++
Sbjct: 541 FCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIK 600
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+WD + G L+T GH+ + +L N D+I S D DG ++W
Sbjct: 601 IWDCSS-GECLKTLDGHNNRLWALSTM-NDGDMIVSADADGVFQFW 644
>UNIPROTKB|F1NIY8 [details] [associations]
symbol:F1NIY8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00550000075093 OMA:AAKDCTI EMBL:AADN02052957
EMBL:AADN02052958 IPI:IPI00601574 ProteinModelPortal:F1NIY8
Ensembl:ENSGALT00000002170 Uniprot:F1NIY8
Length = 364
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/154 (26%), Positives = 72/154 (46%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T+ V+C SSDGK LATG +K ++W T K H ++ + F +L +
Sbjct: 142 TAHVLCIAISSDGKYLATGDRNKLILIWEAATCKRLYTFTGHRDAVSGLSFRKGTYQLYS 201
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S D++V+VW+ + Y + T GH + +D +++ + S DG +R+W I S
Sbjct: 202 ASHDRSVKVWNVEENAY-VETLFGHQDVITGMD-SLSRECCVTSGGRDGTVRFWKIPEES 259
Query: 758 CTRVFKVESFCCWCVNAMNRPCLWDKLDAGDIQI 791
+F C+ +N + D G + +
Sbjct: 260 -QLIFYGHQGSIDCIQLINEEHMVSGADDGSVAL 292
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/138 (27%), Positives = 73/138 (52%)
Query: 622 VSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HS 680
+S+ +++ + ++C FS DG+ LATG D K +W + K E H+
Sbjct: 259 LSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHT 318
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLIC 740
+ +T ++FS + ++ + SFD ++++ + G +L+ F GH + V F+ ++D +I
Sbjct: 319 NGVTCLQFSRNSTQILSGSFDSSLKIHGLKS-GKALKIFRGHQSFVNDCCFNHDEDRVI- 376
Query: 741 SCDGDGEIRYWSINNGSC 758
SC DG+I+ W + C
Sbjct: 377 SCSSDGKIKIWDAKSSDC 394
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 176 (67.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 19 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 78
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S DKT+++WD + G L+T GHS V +F+P + +LI S D +R W + G
Sbjct: 79 ASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGK 136
Query: 758 CTRVFKVES 766
C + S
Sbjct: 137 CLKTLPAHS 145
Score = 170 (64.9 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD LL + DK +W + K L+ HS+ + F+P + + SFD++VR
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 128
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 129 IWDVKT-GKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 181
Score = 170 (64.9 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DVS G K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 89 DVSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 145
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 146 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 203
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 204 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 235
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 12 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 70
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ + L+ + D D ++ W +++G C + K S FCC
Sbjct: 71 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCC 109
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 184 (69.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/117 (35%), Positives = 57/117 (48%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D K L + D A LW DT + + H+ + DV F P AT+S D+T +
Sbjct: 387 FSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQ 446
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
+W D+ Y LR F GH + V + FHPN ++ D R W ++ G RVF
Sbjct: 447 LWSCDHI-YPLRVFAGHLSDVDCVTFHPNSAYVLTG-SSDKTCRLWDVHRGHSVRVF 501
Score = 162 (62.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 38/111 (34%), Positives = 52/111 (46%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F G AT HD+ A LW D + H S + V F P+ + T S DKT R
Sbjct: 429 FGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCR 488
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD G+S+R F GH+ V ++ P+ + S D +G I W I G
Sbjct: 489 LWDVHR-GHSVRVFNGHTQPVTAVAIAPDGHTM-ASADSEGLIHLWDIGTG 537
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 13 DVYIHDYLVKRD-LKASAQAFQAE 35
D Y H Y + RD + +S + ++AE
Sbjct: 55 DAYTHTYTILRDWVDSSLELYKAE 78
Score = 38 (18.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 1 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVS 39
MS TN + L+ + DYL K+ + + E S
Sbjct: 1 MSATNGPQPQDLNRIVLDYLAKKGYSRTEAMLRLEASGS 39
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 185 (70.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 41/119 (34%), Positives = 60/119 (50%)
Query: 644 CHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKT 703
C FS D + L + D A LW +T+ + + H+ + DV FSP AT+S D+T
Sbjct: 685 CSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRT 744
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
R+W ++ LR F GH + ++ FHPN + L + D R W I G C R+F
Sbjct: 745 ARLWTTNHIS-PLRIFTGHLSDCNTVRFHPNINYLATGSN-DKSARLWEIQTGKCVRIF 801
Score = 171 (65.3 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G AT HD+ A LW T+ + H S VRF P++ LAT S DK+ R
Sbjct: 729 FSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSAR 788
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
+W+ G +R FMGH A + ++ F P+ L+ + D + W ++ G +V K++
Sbjct: 789 LWEIQT-GKCVRIFMGHRAPIYTVAFSPD-GRLLATAGEDTSVILWDLSTGK--KVKKMD 844
Query: 766 SFCCWCVNAMNRPC 779
CV +++ C
Sbjct: 845 GHTK-CVYSLDFSC 857
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DG+LLAT G D +LW T K ++ H+ + + FS LA+ S D TVR
Sbjct: 813 FSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVR 872
Query: 706 VWD 708
+WD
Sbjct: 873 LWD 875
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ RA T+ V HF SDG+LL T DK +W T + +L +H + + +FS
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFS 154
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + ++S DKTV++WD + + ++ H V +DFHP+ I + D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWDKTSRE-CVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVK 212
Query: 750 YWSINNGSCTRVFKVESFCCWCVNAMN 776
W + +++ S VNA++
Sbjct: 213 VWDTRTHRLVQHYQLHSAA---VNALS 236
Score = 164 (62.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 40/112 (35%), Positives = 56/112 (50%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C FS + K LA+G D ++WH H +T V FSPS LA+ S
Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 81
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
DKTVR+W + G S F H+A+V S+ F + L+ + D D ++ WS
Sbjct: 82 DKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQLLVTASD-DKTVKVWS 131
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 42/111 (37%), Positives = 55/111 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + + RF P+ +AT S D+TVR
Sbjct: 353 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 412
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN L DG + W I +G
Sbjct: 413 LWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHG 461
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 46/159 (28%), Positives = 65/159 (40%)
Query: 605 LSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVL 664
LS D + D R MD E + + V FS D L + D L
Sbjct: 273 LSLIDKESDDVLERIMDEKTA---SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 329
Query: 665 WHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHS 723
W T + H+ + D +FSP + D+ R+W D+ Y LR F GH
Sbjct: 330 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH--YQPLRIFAGHL 387
Query: 724 ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
A V FHPN + + + D +R W + NG+C R+F
Sbjct: 388 ADVNCTRFHPNSN-YVATGSADRTVRLWDVLNGNCVRIF 425
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 104
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S DKT+++WD + G L+T GHS V +F+P + +LI S D +R W + G
Sbjct: 105 ASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGK 162
Query: 758 CTRVFKVES 766
C + S
Sbjct: 163 CLKTLPAHS 171
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD LL + DK +W + K L+ HS+ + F+P + + SFD++VR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 155 IWDVKT-GKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DVS G K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 115 DVSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 229
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 96
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ + L+ + D D ++ W +++G C + K S FCC
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCC 135
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 104
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S DKT+++WD + G L+T GHS V +F+P + +LI S D +R W + G
Sbjct: 105 ASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGK 162
Query: 758 CTRVFKVES 766
C + S
Sbjct: 163 CLKTLPAHS 171
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD LL + DK +W + K L+ HS+ + F+P + + SFD++VR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 155 IWDVKT-GKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DVS G K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 115 DVSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 229
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 96
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ + L+ + D D ++ W +++G C + K S FCC
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCC 135
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 104
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S DKT+++WD + G L+T GHS V +F+P + +LI S D +R W + G
Sbjct: 105 ASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGK 162
Query: 758 CTRVFKVES 766
C + S
Sbjct: 163 CLKTLPAHS 171
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD LL + DK +W + K L+ HS+ + F+P + + SFD++VR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 155 IWDVKT-GKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DVS G K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 115 DVSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 229
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 96
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ + L+ + D D ++ W +++G C + K S FCC
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCC 135
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 104
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S DKT+++WD + G L+T GHS V +F+P + +LI S D +R W + G
Sbjct: 105 ASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGK 162
Query: 758 CTRVFKVES 766
C + S
Sbjct: 163 CLKTLPAHS 171
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD LL + DK +W + K L+ HS+ + F+P + + SFD++VR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 155 IWDVKT-GKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DVS G K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 115 DVSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 229
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTCHKNEKYC 261
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 96
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ + L+ + D D ++ W +++G C + K S FCC
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCC 135
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 104
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S DKT+++WD + G L+T GHS V +F+P + +LI S D +R W + G
Sbjct: 105 ASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGK 162
Query: 758 CTRVFKVES 766
C + S
Sbjct: 163 CLKTLPAHS 171
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD LL + DK +W + K L+ HS+ + F+P + + SFD++VR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 155 IWDVKT-GKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DVS G K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 115 DVSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 229
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 96
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ + L+ + D D ++ W +++G C + K S FCC
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCC 135
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V FS +G+ LA+ DK +W K + + H I+DV +S L +
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVS 104
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S DKT+++WD + G L+T GHS V +F+P + +LI S D +R W + G
Sbjct: 105 ASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGK 162
Query: 758 CTRVFKVES 766
C + S
Sbjct: 163 CLKTLPAHS 171
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
+SSD LL + DK +W + K L+ HS+ + F+P + + SFD++VR
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+T HS V ++ F N+D LI S DG R W +G C +
Sbjct: 155 IWDVKT-GKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DVS G K +++ ++ V CC+F+ L+ +G D+ +W T K L HS
Sbjct: 115 DVSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS-LDFHPNKDDLI 739
++ V F+ + +SS+D R+WD + G L+T + +S + F PN I
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPN-GKYI 229
Query: 740 CSCDGDGEIRYWSINNGSCTRVF---KVESFC 768
+ D ++ W + G C + + K E +C
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H+ ++ V+FSP+ LA+SS DK +++W A + + +T GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWS 96
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ + L+ + D D ++ W +++G C + K S FCC
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCC 135
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 194 (73.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 47/117 (40%), Positives = 62/117 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V+ FS DG+LLA+G DK LW T + L HS+ + V FSP LA+ SF
Sbjct: 740 VLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSF 799
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
DKTVR+WD G +T GHS +V S+ F P+ L+ S D +R W G+
Sbjct: 800 DKTVRLWDPAT-GSLQQTLRGHSDTVRSVAFSPD-GRLLASGSFDKTVRLWDPATGT 854
Score = 172 (65.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 45/122 (36%), Positives = 60/122 (49%)
Query: 645 HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTV 704
H +S +LA+G D+ LW T + LE HS + V FSP LA+ SFDKTV
Sbjct: 702 HSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTV 761
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G +T GHS V S+ F P+ L+ S D +R W GS + +
Sbjct: 762 RLWDPAT-GSLQQTLRGHSNWVRSVAFSPD-GRLLASGSFDKTVRLWDPATGSLQQTLRG 819
Query: 765 ES 766
S
Sbjct: 820 HS 821
Score = 150 (57.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
++R ++ V FS DG+LLA+G DK LW T + L HS + V FSP
Sbjct: 774 TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG 833
Query: 693 PRLATSSFDKTVRVWD 708
LA+ SFDKTVR+WD
Sbjct: 834 RLLASGSFDKTVRLWD 849
Score = 39 (18.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 191 LMRQNPGTANAMATRMYEEKLKLP-VLRDSL 220
++R NP A+ +E+ L P V+ D L
Sbjct: 267 VLRDNPDIASKSLREQFEKLLLQPLVILDQL 297
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 177 (67.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 44/149 (29%), Positives = 73/149 (48%)
Query: 618 RGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE 677
R + GFS E ++ V C S + + +AT D +W T + + L
Sbjct: 36 RNYESHSGFS--EYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLF 93
Query: 678 EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 737
H I+ V+++ LA++S DKT+R+WD + S+R GH+ V S+DF+P
Sbjct: 94 GHYRGISQVKWATGSKYLASASDDKTIRIWDFEKR-CSVRCLKGHTNYVSSIDFNP-LGT 151
Query: 738 LICSCDGDGEIRYWSINNGSCTRVFKVES 766
L+ S D +R W++ +G+C R+ S
Sbjct: 152 LLVSGSWDETVRIWNLQDGTCLRMLPAHS 180
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 52/206 (25%), Positives = 84/206 (40%)
Query: 626 FSFKEANSVRA---STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSL 682
+ F++ SVR T+ V F+ G LL +G D+ +W+ L HS
Sbjct: 123 WDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEP 182
Query: 683 ITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGH-SASVMSLDFHPNKDDLICS 741
I V S AT+S+D R+WD + G L+T + + + +L F N+ L+ S
Sbjct: 183 IISVSISADGTLCATASYDGMARIWDVLS-GQCLKTLVEPINVPLSNLQFTENRKYLLVS 241
Query: 742 CDGDGEIRYWSINNGSCTRVF----KVESFCCW-CVNAMNRPCLWDKLDAGDIQISDSL- 795
+ + +IR W R+F W C ++ N P + L D D
Sbjct: 242 -NLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKNIPKNTEALPNNDSSYPDDAE 300
Query: 796 -FINANIFCGLGWYGSDEIPAPSWKV 820
F++ G+ +I PS K+
Sbjct: 301 SFMHDAYLLIPSEDGTIQITDPSTKI 326
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 180 (68.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
+ G+LLATGG D + LW + +L H+S + VR + + S ++RVW
Sbjct: 31 ASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESF 767
D + LRT MGH A++ SLDFHP + + S D I+ W I C ++ S
Sbjct: 91 DLE-AAKILRTLMGHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ 148
Query: 768 CCWCV 772
C+
Sbjct: 149 AVRCL 153
Score = 178 (67.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 63/208 (30%), Positives = 91/208 (43%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G+ +A+G D LW HS + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG---S 757
D TV++WD G + F GH+ V ++FHPN + L+ S D IR+W + S
Sbjct: 168 DHTVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVS 225
Query: 758 CTR--VFKVESFCCWCVNAMNRP-CLWDKLDAGDIQISDSLFINANIFCGLGWYGSDEI- 813
C V W V P + + AG +S S + ++F GL D +
Sbjct: 226 CIEGEPGPVRYAGSWVVGLSPPPKVVGCRYGAG---VSRSHHRSCSLFPGLPTAFPDFLR 282
Query: 814 PAPSWKVSCRSCR----ECCLYTGCGDS 837
P P ++ RS CCLY+GC DS
Sbjct: 283 PTPHSRLP-RSVLFNPDGCCLYSGCQDS 309
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ TS V ++ +L+ G +W + K L H + I + F P
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A+ S D +++WD G R + GHS +V L F P+ L + D D ++ W
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAAD-DHTVKLWD 175
Query: 753 INNGSCTRVF 762
+ G F
Sbjct: 176 LTAGKMMSEF 185
Score = 121 (47.7 bits), Expect = 0.00071, P = 0.00071
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R + V C FS DGK LA+ D LW K + H+ + V F P+
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 203
Query: 695 LATSSFDKTVRVWDAD 710
LA+ S D+T+R WD +
Sbjct: 204 LASGSSDRTIRFWDLE 219
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 156 (60.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 46/149 (30%), Positives = 69/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 11 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 70
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V++SP LA+S D+ + VWD D P L GH+A
Sbjct: 71 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 130
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 131 KISDFSWNPNEPWVICSVSEDNIMQVWQM 159
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/100 (28%), Positives = 52/100 (52%)
Query: 659 DKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVWDADNPGY 714
D+K ++W T +T K +++ H++ + + F+P S LAT S DKTV +WD N
Sbjct: 4 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 63
Query: 715 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
L +F H + + + P+ + ++ S D + W ++
Sbjct: 64 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 103
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 156 (60.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 46/149 (30%), Positives = 69/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 4 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 63
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V++SP LA+S D+ + VWD D P L GH+A
Sbjct: 64 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 123
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 124 KISDFSWNPNEPWVICSVSEDNIMQVWQM 152
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 663 VLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVWDADNPGYSLRT 718
++W T +T K +++ H++ + + F+P S LAT S DKTV +WD N L +
Sbjct: 1 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 60
Query: 719 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
F H + + + P+ + ++ S D + W ++
Sbjct: 61 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 96
>UNIPROTKB|Q4VXH1 [details] [associations]
symbol:FBXW2 "F-box/WD repeat-containing protein 2"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AL138836
HOGENOM:HOG000231971 HOVERGEN:HBG051593 EMBL:AL161911
UniGene:Hs.494985 HGNC:HGNC:13608 ChiTaRS:FBXW2 IPI:IPI00647538
SMR:Q4VXH1 Ensembl:ENST00000453291 Uniprot:Q4VXH1
Length = 208
Score = 156 (60.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 11 ETSSLIGHSARVYALYYK-DG-LLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAA--VKFD 66
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD TV W+ + G + F GH+ +V S+D++ D L+ S D ++
Sbjct: 67 EQ--KLVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYNDELDILV-SGSADFTVK 122
Query: 750 YWSINNGSC 758
W+++ G+C
Sbjct: 123 VWALSAGTC 131
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 181 (68.8 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 42/111 (37%), Positives = 55/111 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + + RF P+ +AT S D+TVR
Sbjct: 591 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 650
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN L DG + W I +G
Sbjct: 651 LWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHG 699
Score = 169 (64.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 47/161 (29%), Positives = 66/161 (40%)
Query: 603 SFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKA 662
S LS D + D R MD E + + V FS D L + D
Sbjct: 509 SDLSLIDKESDDVLERIMDEKTA---SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTV 565
Query: 663 VLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMG 721
LW T + H+ + D +FSP + D+ R+W D+ Y LR F G
Sbjct: 566 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH--YQPLRIFAG 623
Query: 722 HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
H A V FHPN + + + D +R W + NG+C R+F
Sbjct: 624 HLADVNCTRFHPNSN-YVATGSADRTVRLWDVLNGNCVRIF 663
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 181 (68.8 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 42/111 (37%), Positives = 55/111 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + + RF P+ +AT S D+TVR
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN L DG + W I +G
Sbjct: 653 LWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHG 701
Score = 169 (64.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 47/161 (29%), Positives = 66/161 (40%)
Query: 603 SFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKA 662
S LS D + D R MD E + + V FS D L + D
Sbjct: 511 SDLSLIDKESDDVLERIMDEKTA---SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTV 567
Query: 663 VLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMG 721
LW T + H+ + D +FSP + D+ R+W D+ Y LR F G
Sbjct: 568 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH--YQPLRIFAG 625
Query: 722 HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
H A V FHPN + + + D +R W + NG+C R+F
Sbjct: 626 HLADVNCTRFHPNSN-YVATGSADRTVRLWDVLNGNCVRIF 665
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 181 (68.8 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 42/111 (37%), Positives = 55/111 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + + RF P+ +AT S D+TVR
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 653
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN L DG + W I +G
Sbjct: 654 LWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHG 702
Score = 168 (64.2 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 46/159 (28%), Positives = 65/159 (40%)
Query: 605 LSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVL 664
LS D + D R MD E + + V FS D L + D L
Sbjct: 514 LSLIDKESDDVLERIMDEKTA---SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 570
Query: 665 WHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHS 723
W T + H+ + D +FSP + D+ R+W D+ Y LR F GH
Sbjct: 571 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH--YQPLRIFAGHL 628
Query: 724 ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
A V FHPN + + + D +R W + NG+C R+F
Sbjct: 629 ADVNCTRFHPNSN-YVATGSADRTVRLWDVLNGNCVRIF 666
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 180 (68.4 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 47/132 (35%), Positives = 68/132 (51%)
Query: 641 VICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSS------LITDVRFSPSMP 693
V+CC FS+DGK +ATG + + A ++ +T + L++ ++ I V FSP
Sbjct: 301 VVCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGK 359
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LAT + DK +RVWD ++ F GH + SLDF I S GD +R W I
Sbjct: 360 YLATGAEDKQIRVWDITTRTIRIQ-FAGHEQDIYSLDF-ARDGRTIASGSGDRTVRLWDI 417
Query: 754 NNGSCTRVFKVE 765
NG+ VF +E
Sbjct: 418 ENGTALTVFTIE 429
Score = 135 (52.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 642 ICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD 701
+C FS DGK LATG DK+ +W T + H I + F+ +A+ S D
Sbjct: 352 VC--FSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGD 409
Query: 702 KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+TVR+WD +N G +L F V ++ P+ + + D +R W + G
Sbjct: 410 RTVRLWDIEN-GTALTVFTIEDG-VTTVAISPDTK-YVAAGSLDKSVRVWDLTQG 461
Score = 46 (21.3 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 27/95 (28%), Positives = 37/95 (38%)
Query: 259 LHGTAGGMSPQ--VQARSQQL-PGSTPDI---KSEINPVLNPRAAGPEGSLMGIPGSNQG 312
L G GGM PQ + SQ P P+I + +++ + P P Q
Sbjct: 86 LEGRGGGM-PQGGIGGPSQHAGPAQPPNIGVGNNVFGAIMSGQTGQPLAPPPPPPQEQQP 144
Query: 313 GNNLTLKGWP-LTGLEPLRSGLLQQQKPFIQAPQP 346
+ + P L+G P QQ PF Q PQP
Sbjct: 145 PQHQMAQPPPGLSGPPPPPPPP-SQQPPFQQYPQP 178
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 173 (66.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 40/116 (34%), Positives = 56/116 (48%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FSSD + + + DK LW +T L H++ V F+P + + SFD+TVR
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTR 760
+WD G L+ HS V ++DF N+D LI S DG R W G C +
Sbjct: 139 IWDVTT-GKCLKVLPAHSDPVTAVDF--NRDGSLIVSSSYDGLCRIWDSGTGHCVK 191
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/126 (30%), Positives = 68/126 (53%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTN--LEE---HSSLITDVRFSPSMPRLATSSF 700
FSSDG+LLA+ DK + +T+ ++E H + I+DV FS + ++S
Sbjct: 32 FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASD 91
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DKT+++WD + G ++T +GH+ ++F+P + ++I S D +R W + G C +
Sbjct: 92 DKTLKLWDVET-GSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDETVRIWDVTTGKCLK 149
Query: 761 VFKVES 766
V S
Sbjct: 150 VLPAHS 155
Score = 134 (52.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 35/155 (22%), Positives = 70/155 (45%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DV G K ++ T+ C +F+ ++ +G D+ +W T K L HS
Sbjct: 99 DVETGSLIK---TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHS 155
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMG-HSASVMSLDFHPNKDDLI 739
+T V F+ + +SS+D R+WD+ G+ ++T + + V + F PN ++
Sbjct: 156 DPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT-GHCVKTLIDDENPPVSFVRFSPNGKFIL 214
Query: 740 CSCDGDGEIRYWSINNGSCTRVFKVESFCCWCVNA 774
D +R W+I++ + + +C+++
Sbjct: 215 VGTL-DNTLRLWNISSAKFLKTYTGHVNAQYCISS 248
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 177 (67.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSS 699
V+C FS D ++LATG D K +W + + E HS +T + FS ++ ++S
Sbjct: 267 VLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSAS 326
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
FD+T+R+ + G L+ F GHS+ V P+ I S DG ++ W++ CT
Sbjct: 327 FDQTIRIHGLKS-GKCLKEFRGHSSFVNEATLTPDGHHAI-SASSDGTVKVWNMKTTECT 384
Query: 760 RVFK 763
FK
Sbjct: 385 STFK 388
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 43/138 (31%), Positives = 64/138 (46%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL----EEHSSLITD----VRFSP 690
S V C FS DG+ L TG D +W+ T K + +L +++ ++ D + FS
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSR 274
Query: 691 SMPRLATSSFDKTVRVWDADNPGYSLRTF-MGHSASVMSLDFHPNKDDL-ICSCDGDGEI 748
LAT + D ++VW + G LR + HS V L F +KD I S D I
Sbjct: 275 DTEMLATGAQDGKIKVWKIQS-GQCLRRYERAHSKGVTCLSF--SKDSTQILSASFDQTI 331
Query: 749 RYWSINNGSCTRVFKVES 766
R + +G C + F+ S
Sbjct: 332 RIHGLKSGKCLKEFRGHS 349
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ +A T+ V HFSSDG+ L T DK +W K +L +H + + RFS
Sbjct: 96 ESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFS 155
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P +A++S DKTV++WD + + +F H ++FHP+ I + D ++
Sbjct: 156 PDGRLIASASDDKTVKLWDKTSRE-CIHSFCEHGGFANHVEFHPS-GTCIAAAGTDKTVK 213
Query: 750 YWSINNGSCTRVFKVES 766
W + + ++V +
Sbjct: 214 VWDVRMNRLLQHYQVHT 230
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 39/128 (30%), Positives = 56/128 (43%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V+C FS G L+A+G DK LW T + H++ + V FS L T+S
Sbjct: 65 VMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASD 124
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DKT++VW + L + H V F P+ LI S D ++ W + C
Sbjct: 125 DKTIKVWTVHRQKF-LFSLSQHINWVRCARFSPD-GRLIASASDDKTVKLWDKTSREC-- 180
Query: 761 VFKVESFC 768
+ SFC
Sbjct: 181 ---IHSFC 185
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R + FS + K LA+G D +W L H + V+FSPS
Sbjct: 17 RGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHL 76
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
+A+ S DKTV +W G S F H+A+V S+ F + L+ + D D I+ W+++
Sbjct: 77 VASGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHFSSDGQSLVTASD-DKTIKVWTVH 134
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 172 (65.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-H 679
D++QG S ++ S T V+ FS+D + + +G DK LW+T T ++ H
Sbjct: 97 DLNQGVSTRQFIS---HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCH 153
Query: 680 SSLITDVRFSPSM--PRLATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKD 736
+ ++ VRFSPS P + ++ +DK V+VW+ N L+T +GH+ V ++ P D
Sbjct: 154 TDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGN--CRLKTNHIGHTGYVNTVTVSP--D 209
Query: 737 DLICSCDG-DGEIRYWSINNG 756
+C+ G DG+ W +N G
Sbjct: 210 GSLCASGGKDGQAMLWDLNEG 230
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G DK LW + S H+ + V FS ++ + S DK++++
Sbjct: 78 SSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKL 137
Query: 707 WDA-DNPGYSLRTFMGHSASVMSLDFHP-NKDDLICSCDGDGEIRYWSINN 755
W+ Y++ T H+ V ++ F P N+D +I S D ++ W++ N
Sbjct: 138 WNTLAQCKYTI-TDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGN 187
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 642 ICCHFSSDGKLLATGGHDKKAVLWHTDTL---------KSKTNLEEHSSLITDVRFSPSM 692
I + +D + + DK ++W D++ + +L H+ ++DV S
Sbjct: 22 IATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDG 81
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+ S+DKT+R+WD N G S R F+ H+ V+S+ F + ++ S D I+ W+
Sbjct: 82 QFALSGSWDKTLRLWDL-NQGVSTRQFISHTKDVLSVAFSADNRQIV-SGSRDKSIKLWN 139
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 172 (65.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-H 679
D++QG S ++ S T V+ FS+D + + +G DK LW+T T ++ H
Sbjct: 97 DLNQGVSTRQFIS---HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCH 153
Query: 680 SSLITDVRFSPSM--PRLATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKD 736
+ ++ VRFSPS P + ++ +DK V+VW+ N L+T +GH+ V ++ P D
Sbjct: 154 TDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGN--CRLKTNHIGHTGYVNTVTVSP--D 209
Query: 737 DLICSCDG-DGEIRYWSINNG 756
+C+ G DG+ W +N G
Sbjct: 210 GSLCASGGKDGQAMLWDLNEG 230
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G DK LW + S H+ + V FS ++ + S DK++++
Sbjct: 78 SSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKL 137
Query: 707 WDA-DNPGYSLRTFMGHSASVMSLDFHP-NKDDLICSCDGDGEIRYWSINN 755
W+ Y++ T H+ V ++ F P N+D +I S D ++ W++ N
Sbjct: 138 WNTLAQCKYTI-TDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGN 187
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 642 ICCHFSSDGKLLATGGHDKKAVLWHTDTL---------KSKTNLEEHSSLITDVRFSPSM 692
I + +D + + DK ++W D++ + +L H+ ++DV S
Sbjct: 22 IATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDG 81
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+ S+DKT+R+WD N G S R F+ H+ V+S+ F + ++ S D I+ W+
Sbjct: 82 QFALSGSWDKTLRLWDL-NQGVSTRQFISHTKDVLSVAFSADNRQIV-SGSRDKSIKLWN 139
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 179 (68.1 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 595 GSLDDN-VESFL---SHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDG 650
G LD N +FL S D T R G ++ S FS + +++A V S DG
Sbjct: 419 GPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSD-FSNRAVWTIKAHDRDVNAIQVSKDG 477
Query: 651 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 710
+++A+ DK LW + T + L H + F+P +LA+ S D+T+R+W+ D
Sbjct: 478 RIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537
Query: 711 NPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
++T GH+ +++ L + ++ + S DG ++ WS+++G C
Sbjct: 538 TQ-QCVQTLEGHTGAILKL-IYISQGTQVVSAAADGLVKVWSLSSGEC 583
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 194 (73.4 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 51/184 (27%), Positives = 86/184 (46%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVRASTSKVICCH 645
++ RLV D + S D G + + V + + ++ ++A +V+CC
Sbjct: 605 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 664
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL--ATSSFDKT 703
FS+D + +AT DKK +W++ T + +EHS + F+ S L AT S D
Sbjct: 665 FSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCF 724
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+++WD N T GH+ SV F P+ D L+ SC DG ++ W + + +
Sbjct: 725 LKLWDL-NQKECRNTMFGHTNSVNHCRFSPD-DKLLASCSADGTLKLWDATSANERKSIN 782
Query: 764 VESF 767
V+ F
Sbjct: 783 VKQF 786
Score = 128 (50.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 37/115 (32%), Positives = 58/115 (50%)
Query: 638 TSKVICCHF--SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL 695
+ +V CCHF SS LLATG D LW + + + + H++ + RFSP L
Sbjct: 699 SEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLL 758
Query: 696 ATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLI---CSCDGDG 746
A+ S D T+++WDA + R + ++L+ P +D ++I CS DG
Sbjct: 759 ASCSADGTLKLWDATSANE--RKSINVKQFFLNLE-DPQEDMEVIVKCCSWSADG 810
Score = 45 (20.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 579 DKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDA 615
+KD++ MD ++ DG L + E + ++ T + A
Sbjct: 17 EKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRA 53
Score = 37 (18.1 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 246 KSAAATGQPSGQVLHGTAG 264
K + G+P +HG AG
Sbjct: 139 KLSKLKGEPGWVTIHGMAG 157
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 176 (67.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSS 699
V+C FS D ++LATG D K +W + + E HS +T + FS ++ ++S
Sbjct: 267 VLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSAS 326
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
FD+T+R+ + G +L+ F GHS+ V F + +I S DG ++ W++ C+
Sbjct: 327 FDQTIRIHGLKS-GKTLKEFRGHSSFVNEATFTQDGHYII-SASSDGTVKVWNVKTTECS 384
Query: 760 RVFK 763
FK
Sbjct: 385 NTFK 388
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL----EEHSSLITD----VRFSP 690
S V C FS DG+ L TG D +W+ T K + +L +++ ++ D + FS
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR 274
Query: 691 SMPRLATSSFDKTVRVWDADNPGYSLRTF-MGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
LAT + D ++VW + G LR F HS V L F + ++ S D IR
Sbjct: 275 DTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 750 YWSINNGSCTRVFKVES 766
+ +G + F+ S
Sbjct: 333 IHGLKSGKTLKEFRGHS 349
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 175 (66.7 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 40/137 (29%), Positives = 64/137 (46%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ +A T+ V HFS DG+ L T DK +W + K +L H++ + RFS
Sbjct: 94 ESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFS 153
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P +A+ D+TVR+WD + + F + S +DF+ + I S D I+
Sbjct: 154 PDGRLIASCGDDRTVRLWDTSSH-QCINIFTDYGGSATFVDFN-SSGTCIASSGADNTIK 211
Query: 750 YWSINNGSCTRVFKVES 766
W I + +KV +
Sbjct: 212 IWDIRTNKLIQHYKVHN 228
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
+ C F+ + K LATG DK ++W+ H+ +IT V F+PS +A+SS
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSR 80
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
D+TVR+W G S F H+ASV S+ F + L+ + D D ++ W +
Sbjct: 81 DQTVRLWTPSIKGEST-VFKAHTASVRSVHFSRDGQRLVTASD-DKSVKVWGV 131
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL-EEHSSLITDVRFSPSMPRLA 696
T + +F+ G L+A+ D+ LW T ++K ++ + + H++ + V FS RL
Sbjct: 60 TDVITGVNFAPSGSLVASSSRDQTVRLW-TPSIKGESTVFKAHTASVRSVHFSRDGQRLV 118
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
T+S DK+V+VW + + L + H+ V F P+ LI SC D +R W ++
Sbjct: 119 TASDDKSVKVWGVERKKF-LYSLNRHTNWVRCARFSPD-GRLIASCGDDRTVRLWDTSSH 176
Query: 757 SCTRVF 762
C +F
Sbjct: 177 QCINIF 182
Score = 119 (46.9 bits), Expect = 0.00092, P = 0.00092
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F+S G +A+ G D +W T K + + H++ + F PS L + S D T++
Sbjct: 194 FNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIK 253
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSIN 754
+ D G + T GH V+++ F ++D DL S D ++ W N
Sbjct: 254 ILDLLE-GRLIYTLHGHKGPVLTVTF--SRDGDLFASGGADSQVLMWKTN 300
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 194 (73.4 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 51/184 (27%), Positives = 86/184 (46%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDDTDPRDAGG-RGMDVSQGFSFKEANSVRASTSKVICCH 645
++ RLV D + S D G + + V + + ++ ++A +V+CC
Sbjct: 605 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 664
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL--ATSSFDKT 703
FS+D + +AT DKK +W++ T + +EHS + F+ S L AT S D
Sbjct: 665 FSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCF 724
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+++WD N T GH+ SV F P+ D L+ SC DG ++ W + + +
Sbjct: 725 LKLWDL-NQKECRNTMFGHTNSVNHCRFSPD-DKLLASCSADGTLKLWDATSANERKSIN 782
Query: 764 VESF 767
V+ F
Sbjct: 783 VKQF 786
Score = 37 (18.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 246 KSAAATGQPSGQVLHGTAG 264
K + G+P +HG AG
Sbjct: 139 KLSKLKGEPGWVTIHGMAG 157
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 176 (67.0 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 42/122 (34%), Positives = 61/122 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LLA+ D +W T T + LE H + V FS LA++S D+TVR
Sbjct: 429 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVR 488
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDF-HPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
+WD + G T GHS+ V S+ F H ++ L+ S D +R W I S F +
Sbjct: 489 IWDTEK-GSHKHTLEGHSSLVTSVSFSHDSR--LLASASNDQTVRIWDIEARSLQHTFDL 545
Query: 765 ES 766
++
Sbjct: 546 DA 547
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V+ +S D +LLA+ D+ +W T+T + LE HS L+ V FS RL S+
Sbjct: 299 VLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS-RLLASAS 357
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
D TV++WD G T GH V S+ F + L+ S D ++ W GS
Sbjct: 358 DSTVKIWDTGT-GSLQHTLEGHRDWVRSVIFS-HDSQLLASASDDSTVKIWDTGTGS 412
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 39/113 (34%), Positives = 53/113 (46%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LLA+ D +W T T + LE H + V FS LA++S D TV+
Sbjct: 387 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 446
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDF-HPNKDDLICSCDGDGEIRYWSINNGS 757
+WD G T GH V S+ F H ++ L+ S D +R W GS
Sbjct: 447 IWDTGT-GSLQHTLEGHRDWVRSVIFSHDSR--LLASASDDRTVRIWDTEKGS 496
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LLA+ D+ +W T+ K LE HSSL+T V FS LA++S D+TVR
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVR 530
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDF 731
+WD + SL+ A++ ++ F
Sbjct: 531 IWDIE--ARSLQHTFDLDATIEAMRF 554
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 178 (67.7 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 41/111 (36%), Positives = 55/111 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + + R+ P+ +AT S D+TVR
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVR 653
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN L DG + W I +G
Sbjct: 654 LWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHG 702
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/161 (28%), Positives = 66/161 (40%)
Query: 603 SFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKA 662
S LS D + D R MD E + + V FS D L + D
Sbjct: 512 SDLSLIDKESDDVLERIMDEKTA---SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTV 568
Query: 663 VLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMG 721
LW T + H+ + D +FSP + D+ R+W D+ Y LR F G
Sbjct: 569 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH--YQPLRIFAG 626
Query: 722 HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
H A V +HPN + + + D +R W + NG+C R+F
Sbjct: 627 HLADVNCTRYHPNSN-YVATGSADRTVRLWDVLNGNCVRIF 666
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 173 (66.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 41/147 (27%), Positives = 71/147 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ RA T+ V HF SDG+ T DK +W T K +L +H + + +FS
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFS 154
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + ++S DKTV++WD + + ++ H V +DFHP+ I + D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWDKTSRE-CVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVK 212
Query: 750 YWSINNGSCTRVFKVESFCCWCVNAMN 776
W + + +++ S VNA++
Sbjct: 213 VWDVRTHRLLQHYQLHSAA---VNALS 236
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 37/107 (34%), Positives = 53/107 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS + K LA+G D ++WH H +T V FSPS LA+ S DKTVR
Sbjct: 27 FSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+W + G S F H+A+V S+ F + + + D D ++ WS
Sbjct: 87 IWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASD-DKTVKVWS 131
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/128 (29%), Positives = 54/128 (42%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C +FS G LLA+G DK +W + T H++ + V F T+S
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DKTV+VW + L + H V F P+ LI S D ++ W + C
Sbjct: 124 DKTVKVWSTHRQKF-LFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSREC-- 179
Query: 761 VFKVESFC 768
V S+C
Sbjct: 180 ---VHSYC 184
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 181 (68.8 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 42/111 (37%), Positives = 55/111 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G +GGHD+ A LW TD + H + + RF P+ +AT S D+TVR
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD N G +R F GH + SL F PN L DG + W I +G
Sbjct: 653 LWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGAT-DGRVLLWDIGHG 701
Score = 168 (64.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 46/159 (28%), Positives = 65/159 (40%)
Query: 605 LSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVL 664
LS D + D R MD E + + V FS D L + D L
Sbjct: 513 LSLIDKESDDVLERIMDEKTA---SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 569
Query: 665 WHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHS 723
W T + H+ + D +FSP + D+ R+W D+ Y LR F GH
Sbjct: 570 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH--YQPLRIFAGHL 627
Query: 724 ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
A V FHPN + + + D +R W + NG+C R+F
Sbjct: 628 ADVNCTRFHPNSN-YVATGSADRTVRLWDVLNGNCVRIF 665
Score = 45 (20.9 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 238 DPNHASYIKSAAATGQPSGQVLHGTAGGMSPQVQ 271
DP + SAA +G +G V G G +S + Q
Sbjct: 162 DPPVSGASGSAAVSGLATGSVAPGKVGSVSVEDQ 195
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 173 (66.0 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 44/142 (30%), Positives = 67/142 (47%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
RA T V FS+DG+ L T D+ LW K L EH++ + RFSP
Sbjct: 99 RAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQL 158
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
+ + S D+TV++WDA + + TF +DFHP+ I + D +R W I
Sbjct: 159 MVSVSDDRTVKLWDASSRQL-IHTFCEPGGYSSYVDFHPSST-CIATASSDNTVRVWDIR 216
Query: 755 NGSCTRVFKVESFCCWCVNAMN 776
+ + ++V S VNA++
Sbjct: 217 THTLLQHYQVHSAA---VNALS 235
Score = 167 (63.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS GK +A+G D ++W+ H +T V+FSPS LA+SS DKTVR
Sbjct: 26 FSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVR 85
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS--CT 759
+W G S+ F H+ SV S+ F + L+ + D D I+ WS++ CT
Sbjct: 86 LWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASD-DQSIKLWSVHRQKIICT 139
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
++R + V C FS DG+L+ + D+ LW + + E + V F PS
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS 198
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+AT+S D TVRVWD L+ + HSA+V +L FHP+ + L+ + D ++
Sbjct: 199 TCIATASSDNTVRVWDIRTHTL-LQHYQVHSAAVNALSFHPSGNHLL-TASSDSTLKILD 256
Query: 753 INNG 756
+ G
Sbjct: 257 LLEG 260
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 174 (66.3 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSS 699
V+C FS D ++LATG D K +W + + E HS +T + FS ++ ++S
Sbjct: 267 VLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSAS 326
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
FD+T+R+ + G +L+ F GHS+ V F + +I S DG ++ W++ C+
Sbjct: 327 FDQTIRIHGLKS-GKTLKEFRGHSSFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECS 384
Query: 760 RVFK 763
FK
Sbjct: 385 NTFK 388
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL----EEHSSLITD----VRFSP 690
S V C FS DG+ L TG D +W+ T K + +L +++ ++ D + FS
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR 274
Query: 691 SMPRLATSSFDKTVRVWDADNPGYSLRTF-MGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
LAT + D ++VW + G LR F HS V L F + ++ S D IR
Sbjct: 275 DTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 750 YWSINNGSCTRVFKVES 766
+ +G + F+ S
Sbjct: 333 IHGLKSGKTLKEFRGHS 349
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 174 (66.3 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSS 699
V+C FS D ++LATG D K +W + + E HS +T + FS ++ ++S
Sbjct: 267 VLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSAS 326
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
FD+T+R+ + G +L+ F GHS+ V F + +I S DG ++ W++ C+
Sbjct: 327 FDQTIRIHGLKS-GKTLKEFRGHSSFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECS 384
Query: 760 RVFK 763
FK
Sbjct: 385 NTFK 388
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL----EEHSSLITD----VRFSP 690
S V C FS DG+ L TG D +W+ T K + +L +++ ++ D + FS
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR 274
Query: 691 SMPRLATSSFDKTVRVWDADNPGYSLRTF-MGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
LAT + D ++VW + G LR F HS V L F + ++ S D IR
Sbjct: 275 DTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 750 YWSINNGSCTRVFKVES 766
+ +G + F+ S
Sbjct: 333 IHGLKSGKTLKEFRGHS 349
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 174 (66.3 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSS 699
V+C FS D ++LATG D K +W + + E HS +T + FS ++ ++S
Sbjct: 267 VLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSAS 326
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
FD+T+R+ + G +L+ F GHS+ V F + +I S DG ++ W++ C+
Sbjct: 327 FDQTIRIHGLKS-GKTLKEFRGHSSFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECS 384
Query: 760 RVFK 763
FK
Sbjct: 385 NTFK 388
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL----EEHSSLITD----VRFSP 690
S V C FS DG+ L TG D +W+ T K + +L +++ ++ D + FS
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR 274
Query: 691 SMPRLATSSFDKTVRVWDADNPGYSLRTF-MGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
LAT + D ++VW + G LR F HS V L F + ++ S D IR
Sbjct: 275 DTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 750 YWSINNGSCTRVFKVES 766
+ +G + F+ S
Sbjct: 333 IHGLKSGKTLKEFRGHS 349
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 174 (66.3 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSS 699
V+C FS D ++LATG D K +W + + E HS +T + FS ++ ++S
Sbjct: 267 VLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSAS 326
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
FD+T+R+ + G +L+ F GHS+ V F + +I S DG ++ W++ C+
Sbjct: 327 FDQTIRIHGLKS-GKTLKEFRGHSSFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECS 384
Query: 760 RVFK 763
FK
Sbjct: 385 NTFK 388
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL----EEHSSLITD----VRFSP 690
S V C FS DG+ L TG D +W+ T K + +L +++ ++ D + FS
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR 274
Query: 691 SMPRLATSSFDKTVRVWDADNPGYSLRTF-MGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
LAT + D ++VW + G LR F HS V L F + ++ S D IR
Sbjct: 275 DTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 750 YWSINNGSCTRVFKVES 766
+ +G + F+ S
Sbjct: 333 IHGLKSGKTLKEFRGHS 349
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ RA T+ V HF SDG+ T DK +W T K +L +H + + +FS
Sbjct: 126 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFS 185
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + ++S DKTV++WD + + ++ H V +DFHP+ + + D ++
Sbjct: 186 PDGRLIVSASDDKTVKLWDKTSRE-CVHSYCEHGGFVTYVDFHPS-GTCVAAAGMDNTVK 243
Query: 750 YWSINNGSCTRVFKVESFCCWCVNAMN 776
W + + +++ S VNA++
Sbjct: 244 VWDVRTHRLLQHYQLHSAA---VNALS 267
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 40/112 (35%), Positives = 55/112 (49%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C FS + K LA+G D ++WH H +T V FSPS LA+ S
Sbjct: 53 VTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 112
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
DKTVR+W + G S F H+A+V S+ F + + + D D I+ WS
Sbjct: 113 DKTVRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTASD-DKTIKVWS 162
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 38/137 (27%), Positives = 66/137 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ RA T+ V HF SDG+ T DK +W T K +L +H + + +FS
Sbjct: 57 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFS 116
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + ++S DKTV++WD + + ++ H V +DFHP+ I + D ++
Sbjct: 117 PDGRLIVSASDDKTVKLWDKSSRE-CVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVK 174
Query: 750 YWSINNGSCTRVFKVES 766
W + + +++ S
Sbjct: 175 VWDVRTHRLLQHYQLHS 191
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C +FS G LLA+G DK +W + T H++ + V F T+S
Sbjct: 26 VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 85
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DKTV+VW + L + H V F P+ LI S D ++ W ++ C
Sbjct: 86 DKTVKVWATHRQKF-LFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKSSREC-- 141
Query: 761 VFKVESFC 768
V S+C
Sbjct: 142 ---VHSYC 146
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 659 DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 718
D ++WH H +T V FSPS LA+ S DKTVR+W + G S
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-V 60
Query: 719 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
F H+A+V S+ F + + + D D ++ W+
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASD-DKTVKVWA 93
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 50/154 (32%), Positives = 71/154 (46%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
+ A + +V C + G LLA+ D A +W+ +L EH+ I +R+
Sbjct: 439 RPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRW 498
Query: 689 SPSMP---------RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLI 739
SP+ P LA++SFD TV++WDA+ G L +F GH V SL F PN + I
Sbjct: 499 SPTGPGTNNPNKQLTLASASFDSTVKLWDAEL-GKMLCSFNGHREPVYSLAFSPN-GEYI 556
Query: 740 CSCDGDGEIRYWSINNGSCTRVFKVES--F-CCW 770
S D I WSI G + + F CW
Sbjct: 557 ASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCW 590
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 44/149 (29%), Positives = 73/149 (48%)
Query: 610 TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT 669
T D + DV G +E +++ +++I F++ G L TG D A+LW +
Sbjct: 194 TGSMDTTAKLWDVESG---EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS 250
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
+ L H I+ V+F+ +AT+S DK+ +VWDA+ G L T +GH+ V+ +
Sbjct: 251 GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEG-GQCLATLLGHNDEVLDV 309
Query: 730 DFHPNKDDLICSCDGDGEIRYWSINNGSC 758
F+ LI + DG R +S + C
Sbjct: 310 CFNYT-GQLIATASADGTSRVFSTDTFQC 337
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 34/112 (30%), Positives = 60/112 (53%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS-PSMPRLATSSFDKTV 704
F+ G TG +D+ +W T + + LE H +++ + F+ P ++AT SFDKT
Sbjct: 100 FNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTC 159
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
++W A+ G TF GH+A ++ L F+P + L+ + D + W + +G
Sbjct: 160 KLWSAET-GKCFYTFRGHTAEIVCLAFNP-QSTLVATGSMDTTAKLWDVESG 209
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R T++++C F+ L+ATG D A LW ++ + + L H + I + F+ + R
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR 233
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSI 753
L T SFD T +WD + G + GH + + F N D LI + D + W
Sbjct: 234 LVTGSFDHTAILWDVPS-GRKVHVLSGHRGEISCVQF--NWDCSLIATASLDKSCKVWDA 290
Query: 754 NNGSC 758
G C
Sbjct: 291 EGGQC 295
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 627 SFKEANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITD 685
S +E +++ + V F++ G +ATG DK LW +T K H++ I
Sbjct: 123 SGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVC 182
Query: 686 VRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
+ F+P +AT S D T ++WD ++ G + T GH A ++SL F+ D L+ D
Sbjct: 183 LAFNPQSTLVATGSMDTTAKLWDVES-GEEVSTLAGHFAEIISLCFNTTGDRLVTG-SFD 240
Query: 746 GEIRYWSINNG 756
W + +G
Sbjct: 241 HTAILWDVPSG 251
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 37/110 (33%), Positives = 53/110 (48%)
Query: 642 ICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD 701
+C F+ G+L+AT D + ++ TDT + LE H I+ V F+ R+ T+S D
Sbjct: 309 VC--FNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVD 366
Query: 702 KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
KT RVW G L+ GHS + S F+ D +I D R W
Sbjct: 367 KTSRVWCVKT-GACLQVLEGHSDEIFSCAFNYEGDTIITGSK-DNTCRIW 414
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 38/152 (25%), Positives = 66/152 (43%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
DV G ++ + + ++ C F+ D L+AT DK +W + + L H+
Sbjct: 247 DVPSG---RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHN 303
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLIC 740
+ DV F+ + +AT+S D T RV+ D L GH + + F+ + +
Sbjct: 304 DEVLDVCFNYTGQLIATASADGTSRVFSTDT-FQCLCQLEGHKGEISKVCFNA-QGSRVL 361
Query: 741 SCDGDGEIRYWSINNGSCTRVFKVES---FCC 769
+ D R W + G+C +V + S F C
Sbjct: 362 TASVDKTSRVWCVKTGACLQVLEGHSDEIFSC 393
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/137 (27%), Positives = 66/137 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ RA T+ V HF SDG+ T DK +W T K +L +H + + +FS
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFS 154
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + ++S DKTV++WD + + ++ H V +DFHP+ I + D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWDKSSRE-CVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVK 212
Query: 750 YWSINNGSCTRVFKVES 766
W + + +++ S
Sbjct: 213 VWDVRTHRLLQHYQLHS 229
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 38/112 (33%), Positives = 55/112 (49%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C FS + K LA+G D ++WH H +T V FSPS LA+ S
Sbjct: 22 VTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 81
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
DKTVR+W + G S F H+A+V S+ F + + + D D ++ W+
Sbjct: 82 DKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASD-DKTVKVWA 131
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 192 (72.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DGK L +G D LW T + + +LE+HS + V FSP +LA+SS D T++
Sbjct: 1010 FSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIK 1069
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+WD+ G RT GHS V S+ F P+ L+ S DG I+ W+
Sbjct: 1070 LWDSAT-GELQRTLEGHSQGVRSVTFSPD-GKLLASNSYDGTIKLWN 1114
Score = 182 (69.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DGK L +G +D +W T + L+ HS + + FSP LA+ S+D T+
Sbjct: 758 FSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTID 817
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+WD+ G L+TF GH S+ S+ F P+ +L + D D I+ W + G
Sbjct: 818 LWDSAT-GELLQTFEGHPHSIWSVAFAPDGKELASASD-DSTIKIWDLATG 866
Score = 179 (68.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 67/221 (30%), Positives = 97/221 (43%)
Query: 550 HSGTTSKPLMMFGTDGAGTLTSPS--N--QLWDDKDLELRADMD---RLVEDGSLDDNVE 602
HSGT + F DG L S S N LWD EL + + + + +
Sbjct: 791 HSGTVES--LAFSPDGK-LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGK 847
Query: 603 SFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKA 662
S D D+ + D++ G + +S S V FS DGKLLA+ D
Sbjct: 848 ELASASD----DSTIKIWDLATGELQQTLDSHSQSVRSVA---FSPDGKLLASSSLDSTI 900
Query: 663 VLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGH 722
+W+ T + + +LE S + V FSP +LA+ S TV++W+ G L+T GH
Sbjct: 901 KVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPAT-GELLQTLEGH 959
Query: 723 SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
S SV S+ F P+ L S D I+ W+ G + FK
Sbjct: 960 SQSVRSVAFSPDGKQL-ASSSSDTTIKLWNSTTGELQQTFK 999
Score = 172 (65.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 38/108 (35%), Positives = 57/108 (52%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DGK LA+G LW+ T + LE HS + V FSP +LA+SS D T++
Sbjct: 926 FSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIK 985
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+W++ G +TF GH + ++ F P+ L+ D D I+ W +
Sbjct: 986 LWNSTT-GELQQTFKGHDLWIRAVAFSPDGKHLVSGSD-DNTIKLWDL 1031
Score = 169 (64.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 43/106 (40%), Positives = 57/106 (53%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DGK LA+G +D LW + T + LE HS I V FSP LA+ S+D+T +
Sbjct: 1136 FSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAK 1195
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+WD G L+ F GHS V S+ F P+ L S G+ I+ W
Sbjct: 1196 LWDPAT-GELLQIFEGHSKWVESVAFSPDGKLLASSSYGE-TIKLW 1239
Score = 157 (60.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 43/125 (34%), Positives = 61/125 (48%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DGKLLA+G +D+ A LW T + E HS + V FSP LA+SS+ +T++
Sbjct: 1178 FSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIK 1237
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
+WD G L+T S S+ F P+ + L S D + + W G + K
Sbjct: 1238 LWDPVT-GELLQTLNDPDESAGSVAFSPDGNRL-ASVD-IFDTKIWDPATGELLQALKGH 1294
Query: 766 SFCCW 770
S W
Sbjct: 1295 SKWVW 1299
Score = 139 (54.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 34/97 (35%), Positives = 46/97 (47%)
Query: 676 LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNK 735
LE H + V FSP +L + S+D TV++WD G L+T GHS +V SL F P+
Sbjct: 746 LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPAT-GELLQTLDGHSGTVESLAFSPD- 803
Query: 736 DDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWCV 772
L+ S D I W G + F+ W V
Sbjct: 804 GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSV 840
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 209 EKLKLPVLRDSLDDAAMKQRFGENMGQLLDPNH 241
++ KL L DD + EN+G+ ++P +
Sbjct: 63 DREKLAALHKISDDVGTCKVVLENLGKKVNPEN 95
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 176 (67.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/153 (30%), Positives = 71/153 (46%)
Query: 623 SQGFSFKEANSV-RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSS 681
++G +A S RA V S + KLLA+G D+ A LW L+ H
Sbjct: 468 AEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRR 527
Query: 682 LITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLIC 740
+ V+FSP L ++S D +VR+W + +S L+TF GH ASV+ + F L+
Sbjct: 528 GVWSVQFSPVDQILGSASADGSVRIWSIQD--FSCLKTFEGHDASVLKIIFVSRGTQLVS 585
Query: 741 SCDGDGEIRYWSINNGSCTRVFKVESFCCWCVN 773
S DG ++ W+I C R W ++
Sbjct: 586 S-GSDGLVKLWTIKTNECVRTLDAHQDKVWALH 617
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G D+ +LW+ + L+ HS + ++ ++ L ++
Sbjct: 69 EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L+C+ DG ++ W I +
Sbjct: 129 STDKTVAVWDSET-GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAA 187
Query: 759 TRVFK 763
+ F+
Sbjct: 188 VQTFQ 192
Score = 136 (52.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKA-AVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 221
Query: 752 SINNGSCT 759
+ T
Sbjct: 222 DLRQNKLT 229
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 41/147 (27%), Positives = 71/147 (48%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E+ RA T+ V HF SDG+ L T DK +W T + +L +H + + +FS
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFS 154
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + ++S DKTV++WD + + ++ H V +DFHP+ I + D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWDKTSRE-CIHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVK 212
Query: 750 YWSINNGSCTRVFKVESFCCWCVNAMN 776
W + +++ S VNA++
Sbjct: 213 VWDARTHRLLQHYQLHSAA---VNALS 236
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 40/112 (35%), Positives = 56/112 (50%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C FS + K LA+G D ++WH H +T V FSPS LA+ S
Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSR 81
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
DKTVR+W + G S F H+A+V S+ F + L+ + D D ++ WS
Sbjct: 82 DKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTASD-DKTVKVWS 131
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 36/142 (25%), Positives = 63/142 (44%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
G +K +++ T + FS GK L T DK +W+ L + L H +
Sbjct: 66 GAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVN 125
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG 744
D +S + T+S DKT+++++ + +T GH+ V +F+P + L+ S
Sbjct: 126 DFAWSADSKSIVTASDDKTLKIYEVPTVKMA-KTLKGHTNYVFCCNFNP-QSSLVVSGSF 183
Query: 745 DGEIRYWSINNGSCTRVFKVES 766
D +R W + G C + S
Sbjct: 184 DESVRIWDVRTGMCVKTLPAHS 205
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K A +++ T+ V CC+F+ L+ +G D+ +W T L HS ++ V F
Sbjct: 154 KMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSF 213
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMG-HSASVMSLDFHPNKDDLICSCDGDGE 747
+ + + S+D VR+WD N G ++T + + V + F PN I S + D
Sbjct: 214 NRDGSLITSGSYDGLVRIWDTAN-GQCVKTLVDDENPPVAFVKFSPN-GKYILSSNLDNT 271
Query: 748 IRYWSINNGSCTRVFKVESFCCWCVNA 774
++ W G + ++ +C+ A
Sbjct: 272 LKLWDFGKGKTLKQYQGHENNKYCIFA 298
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 108 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 167
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 168 IVSCGWDKLVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 223
Query: 753 INNG 756
+N G
Sbjct: 224 LNEG 227
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 33 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 90
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 91 RLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQD 147
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 148 ESHSEWVSCVRFSPNSSNPIIVSCGWDKL 176
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 75 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 134
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D ++ W++ N
Sbjct: 135 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 184
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G D+ +LW+ + L+ HS + ++ ++ L ++
Sbjct: 68 EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSA 127
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L+C+ DG ++ W I +
Sbjct: 128 STDKTVAVWDSET-GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAA 186
Query: 759 TRVFK 763
+ F+
Sbjct: 187 IQTFQ 191
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKA-AIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 220
Query: 752 SINNGSCT 759
+ T
Sbjct: 221 DLRQNKLT 228
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G D+ +LW+ + L+ HS + ++ ++ L ++
Sbjct: 69 EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L+C+ DG ++ W I +
Sbjct: 129 STDKTVAVWDSET-GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAA 187
Query: 759 TRVFK 763
+ F+
Sbjct: 188 IQTFQ 192
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKA-AIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 221
Query: 752 SINNGSCT 759
+ T
Sbjct: 222 DLRQNKLT 229
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G D+ +LW+ + L+ HS + ++ ++ L ++
Sbjct: 69 EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L+C+ DG ++ W I +
Sbjct: 129 STDKTVAVWDSET-GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAA 187
Query: 759 TRVFK 763
+ F+
Sbjct: 188 IQTFQ 192
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKA-AIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 221
Query: 752 SINNGSCT 759
+ T
Sbjct: 222 DLRQNKLT 229
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G D+ +LW+ + L+ HS + ++ ++ L ++
Sbjct: 69 EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L+C+ DG ++ W I +
Sbjct: 129 STDKTVAVWDSET-GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAA 187
Query: 759 TRVFK 763
+ F+
Sbjct: 188 IQTFQ 192
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKA-AIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 221
Query: 752 SINNGSCT 759
+ T
Sbjct: 222 DLRQNKLT 229
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 181 (68.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 44/132 (33%), Positives = 65/132 (49%)
Query: 631 ANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN----LEEHSSLITDV 686
++++ A V C S L+ATGG DK LW DT K + L H + DV
Sbjct: 470 SSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDV 529
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
+F+ + +LA+ S D T+++W+ L+T GHS +V + F N LI S D G
Sbjct: 530 KFAKNSHKLASCSGDMTIKIWNISEKS-CLQTISGHSCAVFRVIFARNDSQLI-SADSAG 587
Query: 747 EIRYWSINNGSC 758
I+ W+I C
Sbjct: 588 IIKIWTIKTADC 599
Score = 41 (19.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 414 GHLLPRGDTDMLIKL 428
GHLL G D ++K+
Sbjct: 121 GHLLATGSADHIVKV 135
Score = 38 (18.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 70 KHSEVAASYIETQL 83
KH ++ YIE QL
Sbjct: 160 KHEKLVVGYIEGQL 173
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 39/104 (37%), Positives = 54/104 (51%)
Query: 654 ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 713
A+G HD+ A LW D H + + V+F P+ LAT S DKTVR+W A G
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-G 458
Query: 714 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
S+R F GH V+SL F PN + S D ++ W + +G+
Sbjct: 459 NSVRLFTGHRGPVLSLSFSPN-GKYLASAGEDQRLKLWDLASGT 501
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/133 (29%), Positives = 56/133 (42%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +R V F +D L + D W + + + H+ + DV S
Sbjct: 334 EMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS 393
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P A+ S D+T R+W D Y LR + GH A V + FHPN + L D +R
Sbjct: 394 PFSLYFASGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGST-DKTVR 451
Query: 750 YWSINNGSCTRVF 762
WS G+ R+F
Sbjct: 452 LWSAQQGNSVRLF 464
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 37/118 (31%), Positives = 54/118 (45%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C F + LATG DK LW S H + + FSP+ LA++
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGE 488
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
D+ +++WD + G + GH+ S+ SL F P+ LI S D +R W I + C
Sbjct: 489 DQRLKLWDLAS-GTLFKELRGHTDSITSLAFSPDSG-LIASASMDNSVRVWDIRSTCC 544
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/189 (28%), Positives = 87/189 (46%)
Query: 557 PLMMFGTDGAGTLTSPSNQLWD-DKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDA 615
P ++ G+ T+ +LW D+ LR + G L D V+ H +++
Sbjct: 394 PFSLYFASGSHDRTA---RLWSFDRTYPLR------IYAGHLAD-VDCVKFHPNSNYLAT 443
Query: 616 GGRGMDVSQGFSFKEANSVRASTSK---VICCHFSSDGKLLATGGHDKKAVLWHTDTLKS 672
G V +S ++ NSVR T V+ FS +GK LA+ G D++ LW +
Sbjct: 444 GSTDKTVRL-WSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD---------AD-NPGYSLRTFMGH 722
L H+ IT + FSP +A++S D +VRVWD AD + G + + G
Sbjct: 503 FKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQ 562
Query: 723 SASVMSLDF 731
++V+S+ F
Sbjct: 563 MSNVLSVQF 571
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 167 (63.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 140 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 196
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 197 VVATKECKAELREHEHVVECIS 218
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 43 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 99
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 100 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 156
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 157 QTGYCVKTF 165
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 94
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 95 HSGK--LLASCSADMTIKLWDFQGFECIR 121
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 40/127 (31%), Positives = 61/127 (48%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL-ATSS 699
V CC + DG LL TG DK + W + K+ + L+ H I + F PS P L T
Sbjct: 109 VSCCKYVDDGHLL-TGSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGG 167
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
DK ++WD Y TF G+++ + S+ F P+ D + + DG R + I +
Sbjct: 168 CDKLAKLWDL-RAAYCCATFPGNTSDINSISFFPSNADFVTGAE-DGIARCFDIR--ASA 223
Query: 760 RVFKVES 766
+F+ S
Sbjct: 224 EIFQYSS 230
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 38/144 (26%), Positives = 60/144 (41%)
Query: 620 MDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSK-TNLEE 678
+ S +F EA SV T C FS K +A GG + V++ T + L
Sbjct: 50 LHTSNKVAFFEAPSVWIMT-----CAFSPSTKSIAAGGLNNFCVVYDTSVPDADPVELVG 104
Query: 679 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDL 738
H+ ++ ++ L T S DKT WD + ++ GH ++SLDF P+ +L
Sbjct: 105 HAGFVSCCKYVDD-GHLLTGSGDKTCMFWDIEQ-AKAISVLKGHEMDIVSLDFLPSNPNL 162
Query: 739 ICSCDGDGEIRYWSINNGSCTRVF 762
+ D + W + C F
Sbjct: 163 FVTGGCDKLAKLWDLRAAYCCATF 186
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 50/173 (28%), Positives = 77/173 (44%)
Query: 541 DVISMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDD- 599
D++S+ LP S P +F T G L +LWD LRA G+ D
Sbjct: 149 DIVSLDFLP-----SNP-NLFVTGGCDKLA----KLWD-----LRAAYCCATFPGNTSDI 193
Query: 600 -NVESFLSHDD--TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATG 656
++ F S+ D T D R D+ + +S S+S + FS GKLL
Sbjct: 194 NSISFFPSNADFVTGAEDGIARCFDIRASAEIFQYSS--PSSSPINSVLFSKSGKLLFIA 251
Query: 657 GHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 709
DK +W + + K+ T+L H + I+ + + LAT S+D+ VR+W +
Sbjct: 252 -KDKTCEVWDSISSKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLWSS 303
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G D+ +LW+ + L+ HS + ++ ++ L ++
Sbjct: 68 EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSA 127
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L+C+ DG ++ W I +
Sbjct: 128 STDKTVAVWDSET-GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAA 186
Query: 759 TRVFK 763
+ F+
Sbjct: 187 IQTFQ 191
Score = 137 (53.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKA-AIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 220
Query: 752 SINNGSCT 759
+ T
Sbjct: 221 DLRQNKLT 228
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 40/127 (31%), Positives = 60/127 (47%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
++ R T++++C F+ ++ATG D A LW + + L H + I + F S
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTS 230
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
R+ T SFD TV VWDA G + T +GH A + S F + LI + D W
Sbjct: 231 GDRIITGSFDHTVVVWDAST-GRKVHTLIGHCAEISSALFSWDCS-LILTGSMDKTCMLW 288
Query: 752 SINNGSC 758
+G C
Sbjct: 289 DATSGKC 295
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F GKL+AT D A +++ T K T LE H I+ + F+P RL T S DKT R
Sbjct: 311 FDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTAR 370
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+WD G L+ GH+ + S F+ K +++ + D R W
Sbjct: 371 IWDVQT-GQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNSCRIW 414
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 650 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS-PSMPRLATSSFDKTVRVWD 708
G TG +D+ +W T + + LE H +++ + F+ P ++AT SFDKT ++W
Sbjct: 104 GSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWS 163
Query: 709 ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
A+ G TF GH+A ++ L F+P + ++ + D + W I +G
Sbjct: 164 AET-GKCYHTFRGHTAEIVCLSFNP-QSTVVATGSMDTTAKLWDIQSG 209
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 43/157 (27%), Positives = 69/157 (43%)
Query: 627 SFKEANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITD 685
S +E +++ + V F++ G +ATG DK LW +T K H++ I
Sbjct: 123 SGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVC 182
Query: 686 VRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
+ F+P +AT S D T ++WD + G + T GH A ++SL F + D +I D
Sbjct: 183 LSFNPQSTVVATGSMDTTAKLWDIQS-GEEVVTLTGHLAEIISLSFDTSGDRIITG-SFD 240
Query: 746 GEIRYWSINNGSCTRVFKVESFCCWCVNAMNRPCLWD 782
+ W + G KV + C + WD
Sbjct: 241 HTVVVWDASTGR-----KVHTLIGHCAEISSALFSWD 272
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 41/152 (26%), Positives = 66/152 (43%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS 680
D S G ++ +++ +++ FS D L+ TG DK +LW + K L H
Sbjct: 247 DASTG---RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHD 303
Query: 681 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLIC 740
I D F + +AT+S D T RV++A + GH + + F+P + L+
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARVYNATTRK-CITKLEGHEGEISKISFNPQGNRLLT 362
Query: 741 SCDGDGEIRYWSINNGSCTRVFKV---ESFCC 769
D R W + G C +V + E F C
Sbjct: 363 G-SSDKTARIWDVQTGQCLQVLEGHTDEIFSC 393
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 41/157 (26%), Positives = 67/157 (42%)
Query: 610 TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT 669
T D + D+ G +E ++ +++I F + G + TG D V+W T
Sbjct: 194 TGSMDTTAKLWDIQSG---EEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAST 250
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
+ L H + I+ FS + T S DKT +WDA + G + T GH ++
Sbjct: 251 GRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATS-GKCVATLTGHDDEILDS 309
Query: 730 DF-HPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
F + K LI + DG R ++ C + K+E
Sbjct: 310 CFDYTGK--LIATASADGTARVYNATTRKC--ITKLE 342
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 165 (63.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 42/124 (33%), Positives = 63/124 (50%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FSSD + + +G DK LW+T K E HS ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKLVNVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 44/150 (29%), Positives = 68/150 (45%)
Query: 651 KLLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKT 703
+L + DK ++W + +TN L HS ++DV S + S+D T
Sbjct: 29 RLFLSCRRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 86
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 87 LRLWDLTT-GTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWN-TLGVCKYTVQ 143
Query: 764 VESFCCW--CV----NAMNR---PCLWDKL 784
ES W CV N+ N C WDKL
Sbjct: 144 DESHSEWVSCVRFSPNSSNPIIVSCGWDKL 173
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ HS V + F PN + +I SC D + W++ N
Sbjct: 132 WNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLAN 181
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 611 DPRDAGGRGMDVSQGFSFKEA----NSVRAST-------SKVICCHFSSDGKLLATGGHD 659
DP AGG G S G + +S++A +V CC F G LA+ G D
Sbjct: 55 DPPAAGGGGGQPSTGALLQSGPPRCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFD 114
Query: 660 KKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 718
+ +LW+ + L+ HS + ++ ++ L ++S DKTV VWD++ G ++
Sbjct: 115 RLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET-GERVKR 173
Query: 719 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
GH++ V S L+C+ DG ++ W I + + F+
Sbjct: 174 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ 218
Score = 136 (52.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 190
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKA-AVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 247
Query: 752 SINNGSCT 759
+ T
Sbjct: 248 DLRQNKLT 255
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G D+ +LW + L+ HS + ++ ++ L ++
Sbjct: 69 EVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L+C+ DG ++ W I +
Sbjct: 129 STDKTVAVWDSET-GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAA 187
Query: 759 TRVFK 763
+ F+
Sbjct: 188 IQTFQ 192
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG +L + DK +W ++T + L+ H+S + +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+L T S D TV++WD +++TF ++ V+++ F+ D +I S D +I+ W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKA-AIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVW 221
Query: 752 SINNGSCT 759
+ T
Sbjct: 222 DLRQNKLT 229
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVEDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 170 (64.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 42/133 (31%), Positives = 60/133 (45%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
+ +S+ T V S + + + D LW DT + H++ I DV+FS
Sbjct: 395 QKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFS 454
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P AT+S D+T R+WD ++ LR F+GH V + FHPN L D R
Sbjct: 455 PFGYYFATASHDQTARLWDVEHAA-PLRVFVGHQNDVDCVSFHPNAAYLATG-SSDHTTR 512
Query: 750 YWSINNGSCTRVF 762
W + G RVF
Sbjct: 513 MWDVRTGGTVRVF 525
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/113 (31%), Positives = 52/113 (46%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS G AT HD+ A LW + H + + V F P+ LAT S D T R
Sbjct: 453 FSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTR 512
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDL-ICSCDGDGEIRYWSINNGS 757
+WD G ++R F H + V +L + D L + S D G I+ W + + +
Sbjct: 513 MWDVRTGG-TVRVFNAHHSPVSALCM--SADGLSLASADESGIIKVWDLRSSN 562
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 171 (65.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
S + KLLATG D+ A LW + H + +V+FSP+ LAT+S D T+++
Sbjct: 488 SPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKL 547
Query: 707 WDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
W + +S L+TF GH ASV+ + F L+ S DG ++ W+I + C R
Sbjct: 548 WALQD--FSCLKTFEGHDASVLKVAFVSRGSQLLSS-GSDGLLKLWTIKSNECVRTLDAH 604
Query: 766 SFCCW 770
W
Sbjct: 605 EDKVW 609
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
L+++T H I + SP+ LAT S D+T ++W A L F GH + ++
Sbjct: 469 LQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLW-ALPQCQLLGVFTGHRRGLWNV 527
Query: 730 DFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
F P D ++ + DG I+ W++ + SC + F+
Sbjct: 528 QFSPT-DQVLATASADGTIKLWALQDFSCLKTFE 560
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 183 (69.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 617 GRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL 676
G D + + K + V A + + + L+ TG D+ A +W L L
Sbjct: 478 GISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTL 537
Query: 677 EEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 736
+ H I V FS + T+S DKTV++W A + G L+TF GH++SV+ F +
Sbjct: 538 KGHKRRIFSVEFSTVDQCVMTASGDKTVKIW-AISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 737 DLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWCV 772
+ SC DG ++ W++N C + W +
Sbjct: 597 QFV-SCGADGLLKLWNVNTSECIATYDQHEDKVWAL 631
Score = 172 (65.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 40/125 (32%), Positives = 61/125 (48%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
+++ + + S D KLL + GH ++ +W +TLK + + H + + S
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS 113
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHP--NKDDLICSCDGDGEIR 749
LAT+ D+ V VWD D G+ F GH V S+ FHP NK+ LI D D +R
Sbjct: 114 GGLLATAGADRKVLVWDVDG-GFCTHYFRGHKGVVSSILFHPDSNKNILISGSD-DATVR 171
Query: 750 YWSIN 754
W +N
Sbjct: 172 VWDLN 176
Score = 138 (53.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 32/117 (27%), Positives = 57/117 (48%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG +A D ++ TD+ K+ +E S +T + SP L ++ + +RV
Sbjct: 28 SSDGSFIACACGDVINIVDSTDS-SVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 707 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
WD + +R++ GH VM + H + L+ + D ++ W ++ G CT F+
Sbjct: 87 WDLETLK-CIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVWDVDGGFCTHYFR 141
Score = 37 (18.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 312 GGNNLTLKGWPLTGL 326
G + TLK W L G+
Sbjct: 465 GSGDRTLKVWSLDGI 479
Score = 37 (18.1 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 809 GSDEIPAPSWKVSCRSCRECCL 830
GSD+ W ++ ++ + CL
Sbjct: 164 GSDDATVRVWDLNAKNTEKKCL 185
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 170 (64.9 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 44/153 (28%), Positives = 66/153 (43%)
Query: 609 DTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD 668
D + D R +D G + S+ T V C F+ + LL + D LW
Sbjct: 424 DKESADINVRMLDDRSG---EVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLL 480
Query: 669 TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS 728
T H + DVRF+P + S+DKT R+W D+ +LR F+GH + V
Sbjct: 481 TWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDS-NQALRVFVGHLSDVDC 539
Query: 729 LDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV 761
+ FHPN + + + D +R W G R+
Sbjct: 540 VQFHPNSN-YVATGSSDRTVRLWDNMTGQSVRL 571
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/112 (35%), Positives = 57/112 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F+ G + +DK A LW TD+ ++ H S + V+F P+ +AT S D+TVR
Sbjct: 500 FAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVR 559
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+WD + G S+R GH SV SL F + S D I W ++NGS
Sbjct: 560 LWD-NMTGQSVRLMTGHKGSVSSLAFSAC-GRYLASGSVDHNIIIWDLSNGS 609
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 41/140 (29%), Positives = 58/140 (41%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+V S V C S D +LA G D +W K +T ++ + S+
Sbjct: 372 TVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRT-----------LKDADSL 420
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
L S D VR+ D D G R+ MGH+ V F P + L+ SC D IR WS
Sbjct: 421 RELDKESADINVRMLD-DRSGEVTRSLMGHTGPVYRCAFAPEMN-LLLSCSEDSTIRLWS 478
Query: 753 INNGSCTRVFKVESFCCWCV 772
+ SC ++ + W V
Sbjct: 479 LLTWSCVVTYRGHVYPVWDV 498
Score = 130 (50.8 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
S V C F + +ATG D+ LW T +S + H ++ + FS LA+
Sbjct: 535 SDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASG 594
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWSIN 754
S D + +WD N G + T + H+++V ++ F ++D + + G D + W +
Sbjct: 595 SVDHNIIIWDLSN-GSLVTTLLRHTSTVTTITF--SRDGTVLAAAGLDNNLTLWDFH 648
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 175 (66.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 39/117 (33%), Positives = 57/117 (48%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +L+A+ D +W T T+ + NLE H + + V FS LA++S D TV+
Sbjct: 481 FSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVK 540
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
+WD G T GH V S+ F P+ L+ S DG ++ W G+ F
Sbjct: 541 IWDTAT-GSLENTLEGHDDRVNSVSFSPDSR-LLASASDDGTVKIWYAATGTVQHTF 595
Score = 170 (64.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 75/168 (44%)
Query: 603 SFLSHDDTDPRDAGGRG-MDV-SQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDK 660
SF SHD A G G + + SF + N++ V FS D +LLA+ D
Sbjct: 270 SF-SHDSRLLASASGDGTVKIWDTATSFLQ-NTLEGHNEWVKSVVFSHDSRLLASASDDG 327
Query: 661 KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM 720
+W T T + L+ H+ + V FS +A+ S D+TVR+W+ G TF
Sbjct: 328 TVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT-GLLRHTFE 386
Query: 721 GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFC 768
H SVM++ F + L + DG G ++ W GS V + C
Sbjct: 387 DHEDSVMAVSFAHDSRRLASASDG-GNVKIWDTRTGSLQNVLEGHDDC 433
Score = 164 (62.8 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 48/151 (31%), Positives = 70/151 (46%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LLA+ D +W T T + LE H+ + V FS LA++S D TV+
Sbjct: 271 FSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVK 330
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDF-HPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
+WD G R GH+ SV S+ F H ++ LI S D +R W G F+
Sbjct: 331 IWDTAT-GTLQRMLKGHNDSVRSVVFSHDSR--LIASGSNDRTVRIWETTTGLLRHTFED 387
Query: 765 ESFCCWCVN-AMNRPCLWDKLDAGDIQISDS 794
V+ A + L D G+++I D+
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDT 418
Score = 159 (61.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
N++ + + V FS D +LLA+ D +W T T + LE H + V FSP
Sbjct: 509 NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPD 568
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
LA++S D TV++W A G TF G +SL F + +L+ S DG ++ W
Sbjct: 569 SRLLASASDDGTVKIWYAAT-GTVQHTFDGSGRVAISLAFS-HTSNLLASAMDDGTVKIW 626
Query: 752 SINNGSCTRVFKVE 765
+ S F ++
Sbjct: 627 DMEIYSLRHTFDLD 640
Score = 155 (59.6 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +L+A+G +D+ +W T T + E+H + V F+ RLA++S V+
Sbjct: 355 FSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVK 414
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+WD G GH V S+ F P+ L+ S D ++ W GS R +
Sbjct: 415 IWDT-RTGSLQNVLEGHDDCVNSVSFSPDSR-LLASASDDRTVKIWHAATGSLQRTLE 470
Score = 145 (56.1 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 37/112 (33%), Positives = 55/112 (49%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V+ F+ D + LA+ +W T T + LE H + V FSP LA++S
Sbjct: 392 VMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASD 451
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDF-HPNKDDLICSCDGDGEIRYW 751
D+TV++W A G RT GH+ V S+ F H ++ LI S D ++ W
Sbjct: 452 DRTVKIWHAAT-GSLQRTLEGHNDWVRSVVFSHDSR--LIASASDDMTVKIW 500
Score = 136 (52.9 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LLA+ D+ +WH T + LE H+ + V FS +A++S D TV+
Sbjct: 439 FSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVK 498
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDF-HPNKDDLICSCDGDGEIRYWSINNGS 757
+WD H V S+ F H ++ L+ S D ++ W GS
Sbjct: 499 IWDTATVPLQ-NNLESHDNWVRSVVFSHDSR--LLASASDDMTVKIWDTATGS 548
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 168 (64.2 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 55/187 (29%), Positives = 83/187 (44%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD-----TDPRDAGGRGMDVSQG--FS 627
+LWD L A + L ++G V H D T DA GR D+ G
Sbjct: 347 RLWD-----LEAQEEILHQEGH-SKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F E + ++ +FS +G +ATG D +W K + H +L+T V+
Sbjct: 401 FLEGH-----LKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVK 455
Query: 688 FSPSMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
F P+ L T ++D T ++W +PG+S L+T GH VM LD + LI +C D
Sbjct: 456 FEPNHGNFLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGLDISLD-GQLIATCSYD 512
Query: 746 GEIRYWS 752
+ W+
Sbjct: 513 RTFKLWT 519
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 168 (64.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 44/148 (29%), Positives = 64/148 (43%)
Query: 631 ANSVRASTSKVICCHFS-SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
A+ + ++C FS + LATG D A +W +T K L+ H+ + V +S
Sbjct: 145 AHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWS 204
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN---KDDL--ICSCDG 744
P RLAT S DKTVR+WD + GH+ V + + P +D + S
Sbjct: 205 PDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASK 264
Query: 745 DGEIRYWSINNGSCTRVFKVESFCCWCV 772
D R W++N G V CV
Sbjct: 265 DFTARIWTVNTGRTEHVLSGHKGSVSCV 292
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K N++R + V C FS+D +LL T D +W+ T K T+L H + V +
Sbjct: 446 KFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDW 505
Query: 689 SPSMPRLATSSFDKTVRVW 707
SP R+ + DK VR+W
Sbjct: 506 SPDGQRVGSGGRDKAVRLW 524
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F +
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HTGK--LLASCSADMTIKLWDFQGFECIR 186
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 166 (63.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 632 NSVRASTSKV--ICCHFSSDGKLLATGGHDKKAVLWHTDT-LKSKTNLEEHSSLITDVRF 688
N TS V + H+ D + G DKK ++W T T K +E H+S + + F
Sbjct: 218 NIYNGHTSIVEDVAWHYIHD-TFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSF 276
Query: 689 SPSMPRL-ATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE 747
+P L AT S DKTV +WD N G L + + H+ V + F P+ + ++ SC D
Sbjct: 277 NPFCEFLVATGSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRR 336
Query: 748 IRYWSIN 754
+ W ++
Sbjct: 337 VNVWDLS 343
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 41/141 (29%), Positives = 62/141 (43%)
Query: 629 KEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEEHSSLITDV 686
K + V A S+V C F+ + L+ATG DK LW L ++ + L H+ + V
Sbjct: 259 KPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLISHTDEVFQV 318
Query: 687 RFSPSMPR-LATSSFDKTVRVWD-------------ADNPGYSLRTFMGHSASVMSLDFH 732
+FSP LA+ D+ V VWD AD P L GH++ + ++
Sbjct: 319 QFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWN 378
Query: 733 PNKDDLICSCDGDGEIRYWSI 753
PN I S D ++ W +
Sbjct: 379 PNDPWSIASVAEDNILQIWQM 399
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 170 (64.9 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 49/152 (32%), Positives = 69/152 (45%)
Query: 613 RDAGGRGMDVSQGFSFKEANSVRASTSK------VICCHFSSDGKLLATGGHDKKAVLWH 666
RD MD ++ K A + S + C FS DGK+LAT LW
Sbjct: 224 RDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWE 283
Query: 667 TDTLKSKTN-LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSAS 725
+ + L++H TDV FSP LAT+S D+T ++W D G L+TF GH
Sbjct: 284 MPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD--GTLLQTFEGHLDR 341
Query: 726 VMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+ + FHP+ + + D R W IN G+
Sbjct: 342 LARVAFHPS-GKYLGTTSYDKTWRLWDINTGA 372
Score = 166 (63.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/118 (38%), Positives = 55/118 (46%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS LAT D+ A LW TD +T E H + V F PS L T+S+DKT R
Sbjct: 306 FSPVDDCLATASADRTAKLWKTDGTLLQT-FEGHLDRLARVAFHPSGKYLGTTSYDKTWR 364
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+WD N G L GHS SV + F + L SC D R W + G VF+
Sbjct: 365 LWDI-NTGAELLLQEGHSRSVYGIAFQQD-GALAASCGLDSLARVWDLRTGRSILVFQ 420
Score = 143 (55.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSS 699
V +FS +G LA+GG D + +W KS + H++L++ V++ P LAT+S
Sbjct: 426 VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATAS 485
Query: 700 FDKTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+D V +W + +SL ++ GH + V SLD + I + D I+ W+
Sbjct: 486 YDMKVNIWSGRD--FSLVKSLAGHESKVASLDITADSS-CIATVSHDRTIKLWT 536
Score = 132 (51.5 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 35/108 (32%), Positives = 45/108 (41%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F GK L T +DK LW +T E HS + + F A+ D R
Sbjct: 347 FHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLAR 406
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
VWD G S+ F GH V S++F PN L S D + R W +
Sbjct: 407 VWDL-RTGRSILVFQGHIKPVFSVNFSPNGYHL-ASGGEDNQCRIWDL 452
Score = 44 (20.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 545 MPALPHSGTTSKPLMMFG-TDGAGTLTSPSNQLWDDKDLELRADMDRLVE 593
+P +PH P + G TS S+ DD+ +E+ + ++ E
Sbjct: 50 IPMMPHPPVARPPTFRPPVSQNGGVKTSDSDSESDDEHIEISEESKQVRE 99
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 170 (64.9 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
S + KLLATG D+ A LW + H + +V+FSP+ LAT+S D T+++
Sbjct: 488 SPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKL 547
Query: 707 WDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
W + +S L+TF GH ASV+ + F L+ S DG ++ W+I + C R
Sbjct: 548 WALQD--FSCLKTFEGHDASVLKVAFVSRGAQLLSS-GSDGLLKLWTIKSNECVRTLDAH 604
Query: 766 SFCCW 770
W
Sbjct: 605 EDKVW 609
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 38/137 (27%), Positives = 58/137 (42%)
Query: 642 ICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEE--------------HSSLITDV 686
ICC + L TG D LW + L SK + H I +
Sbjct: 427 ICCSRLKES-FLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSL 485
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
SP+ LAT S D+T ++W A L F GH + ++ F P D ++ + DG
Sbjct: 486 AVSPNDKLLATGSQDRTAKLW-ALPQCQLLGVFSGHRRGLWNVQFSPT-DQVLATASADG 543
Query: 747 EIRYWSINNGSCTRVFK 763
I+ W++ + SC + F+
Sbjct: 544 TIKLWALQDFSCLKTFE 560
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 162 (62.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 643 CCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDK 702
CC FS DG+L+A+ D LW K L+ H + V FSP +LA+ +DK
Sbjct: 74 CC-FSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK 132
Query: 703 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
VW+ + G + +GH S+ S DF P D L D + W +
Sbjct: 133 RAIVWEVQS-GRRVHLLVGHCDSIQSSDFSPTSDSLATG-SWDSTVHIWDL 181
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 40/114 (35%), Positives = 56/114 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D K LA+GG DK+A++W + + L H I FSP+ LAT S+D TV
Sbjct: 118 FSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVH 177
Query: 706 VWD--ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW--SINN 755
+WD A P S GH+ ++ L + + L+ S D I W + NN
Sbjct: 178 IWDLRASTPVVSYHNLEGHTGNISCLCY--SASGLLASGSWDKTICVWKPTTNN 229
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 38/129 (29%), Positives = 55/129 (42%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSS 699
+V C FS DG+ L T D +W T + + L H + FSP +A+SS
Sbjct: 28 EVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSS 87
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
D ++R+WD L GH SV ++ F P+ L S D W + +G
Sbjct: 88 SDHSIRLWDVAR-SKCLHVLKGHQRSVETVSFSPDSKQL-ASGGWDKRAIVWEVQSGR-- 143
Query: 760 RVFKVESFC 768
RV + C
Sbjct: 144 RVHLLVGHC 152
Score = 126 (49.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
+++ T + C +S+ G LLA+G DK +W T L+ H+ + + FSP
Sbjct: 191 HNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPD 249
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMG 721
+LA++ + +TV+VWD G L T G
Sbjct: 250 ELKLASAGYSRTVKVWDCLT-GKCLETLKG 278
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ LEL++ ++ + G + +V + + DA R D+ G K+ ++ A
Sbjct: 49 WSDERLELQSTLEGH-QLGVVSVDVSPSGNIMASSSLDAHIRLWDLESG---KQIRAIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ +T K + +L+ I + +SP LA
Sbjct: 105 GPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYEVQHA 222
Query: 757 SCTRVFKVESFCCWCVNAMNRP 778
S W +N P
Sbjct: 223 SLAATLSGHG--SWVLNVAFSP 242
Score = 139 (54.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
++ +S DGK LA+G D ++ T K LE H+ I + FSP L T+S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
D +++++ + + T GH + V+++ F P+ D S D ++ W ++ +C
Sbjct: 211 DGYIKIYEVQHASLAA-TLSGHGSWVLNVAFSPD-DTHFVSSSSDKSVKVWDVSARTCVH 268
Query: 761 VF 762
F
Sbjct: 269 TF 270
Score = 129 (50.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LL T D ++ L H S + +V FSP +SS DK+V+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVK 257
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
VWD + + TF+ H V + ++ N ++ D D EI +
Sbjct: 258 VWDV-SARTCVHTFLDHQDQVWGVKYNKNGSKIVSVAD-DQEIHVY 301
Score = 37 (18.1 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 587 DMDRLVEDGSLDDNVESFLSHDD 609
D LV GSLDD V+ + D+
Sbjct: 30 DGSELVISGSLDDLVKVWKWSDE 52
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 45/155 (29%), Positives = 75/155 (48%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWH----TDTLKSKTNLEEHSSLITDVRFSPSMPR 694
++V C ++SS G LA+ DK A +W + + + L +HS + V +SP
Sbjct: 90 NEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENA 149
Query: 695 LATSSFDKTVRVW-DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
L ++S+D T++++ + D+ T +GH ++V SL FH + +L SC D ++ W
Sbjct: 150 LVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFH-SSGELFVSCGDDKVLKIWKC 208
Query: 754 NNGSCTRVFKVESFCCWCVNAMNRPCL---WDKLD 785
+ V K S C NRP W KL+
Sbjct: 209 LKSGPSDV-KWISICT-IAGYHNRPIYDVDWSKLN 241
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 168 (64.2 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 42/121 (34%), Positives = 59/121 (48%)
Query: 651 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 710
KLLATG D+ A LW + H + V+FSP LAT+S D T+++W
Sbjct: 381 KLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 440
Query: 711 NPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCC 769
+ +S L+TF GH ASV+ + F L+ S DG ++ W+I N C R
Sbjct: 441 D--FSCLKTFEGHDASVLKVAFVSRGTQLLSS-GSDGLVKLWTIKNNECVRTLDAHEDKV 497
Query: 770 W 770
W
Sbjct: 498 W 498
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00055
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
L+++T H I V +P+ LAT S D+T ++W A L F GH + +
Sbjct: 358 LQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLW-ALPQCQLLGVFSGHRRGLWCV 416
Query: 730 DFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
F P D ++ + DG I+ W++ + SC + F+
Sbjct: 417 QFSP-MDQVLATASADGTIKLWALQDFSCLKTFE 449
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 162 (62.1 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 40/112 (35%), Positives = 56/112 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTN----LEEHSSLITDVRFSPSMPRLATSSFD 701
+S+DG LAT DK +W TD + L+EHS + V + PS LA+SS+D
Sbjct: 115 WSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD 174
Query: 702 KTVRVW-DADNPGYSLRTFMGHSASVMSLDFHPNKDDL-ICSCDGDGEIRYW 751
TVR+W D D+ + GH +V S DF + +CS D +R W
Sbjct: 175 DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 161 (61.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 53/200 (26%), Positives = 94/200 (47%)
Query: 564 DGAGTLTSPS-NQL-----WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGG 617
DG+ T+ S S + L W+D+ L+L+ ++ + G + ++ S + DA
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGH-QLGVVSVDISHTGSIAASSSLDAHI 88
Query: 618 RGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE 677
R D+ G K+ S+ A FS D + LATG H K ++ +T K + +L+
Sbjct: 89 RLWDLETG---KQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLD 145
Query: 678 EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 737
I + +SP LA+ + D + ++D G L T GH+ + SL F P+
Sbjct: 146 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 738 LICSCDGDGEIRYWSINNGS 757
L+ + D DG I+ + + + +
Sbjct: 205 LVTASD-DGYIKIYDVQHAN 223
Score = 137 (53.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
++ +S DGK LA+G D ++ T K LE H+ I + FSP L T+S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
D ++++D + + T GH + V+++ F P+ D S D ++ W +C
Sbjct: 211 DGYIKIYDVQHANLA-GTLSGHGSWVLNVAFCPD-DTHFVSSSSDKSVKVWDAGTRTCVH 268
Query: 761 VF 762
F
Sbjct: 269 TF 270
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 167 (63.8 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 43/130 (33%), Positives = 63/130 (48%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
S++ C F+S G LLATGG DK +W + + K+ L S I V FSP+ + +
Sbjct: 325 SEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGT 384
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S D + R+W+ + G S T GH V + F N + ++ D I+ W + G C
Sbjct: 385 SNDNSARLWNTEL-GRSRHTLTGHIGKVYTGKFI-NSNRVVTGSH-DRTIKLWDLQKGYC 441
Query: 759 TRVFKVESFC 768
TR S C
Sbjct: 442 TRTIFCFSSC 451
Score = 134 (52.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 616 GGRGMDVSQGFSFKEANSVRASTSKVICCHFS-SDGKLLATGGHDKKAVLWHTDTLKSKT 674
G + + V S ++ +++ ++ ++ FS +D +L T +D A LW+T+ +S+
Sbjct: 344 GDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGTS-NDNSARLWNTELGRSRH 402
Query: 675 NLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN 734
L H + +F S R+ T S D+T+++WD GY RT S S L
Sbjct: 403 TLTGHIGKVYTGKFINSN-RVVTGSHDRTIKLWDLQK-GYCTRTIFCFS-SCNDLVILGG 459
Query: 735 KDDLICSCDGDGEIRYWSINNGSCTRV 761
+ S D +R+W N G T+V
Sbjct: 460 SGTHLASGHVDHSVRFWDSNAGEPTQV 486
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 164 (62.8 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 37/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ +++ DKT+++W+ GY ++TF GH V + PN+D LI SC D +R W
Sbjct: 205 DHIVSAARDKTIKMWEVQT-GYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F ++ + D +W +T + L+ H+ + D+ F S
Sbjct: 108 RSPVTRVI---FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D I+ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTIKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 QTGYCVKTF 230
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF- 731
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD 159
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTR 760
H K L+ SC D I+ W C R
Sbjct: 160 HSGK--LLASCSADMTIKLWDFQGFECIR 186
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 161 (61.7 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 42/130 (32%), Positives = 65/130 (50%)
Query: 631 ANSVRASTSKVICCHFSSDGKLLATGGHDKKAVL-WHTDTLKSKTNLEEHSSLITDVRFS 689
+ +++ + S+V S D K LA G+ + +T + E H++ +T + F
Sbjct: 33 SRTIQHADSQVNRLCISPDKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFH 92
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
LATSS D TV+VWD P S++ H + V L HPN+ +L+ SCD G +R
Sbjct: 93 CDGKWLATSSEDGTVKVWDMRAP--SVQRNYDHKSPVNDLLIHPNQGELL-SCDQSGRVR 149
Query: 750 YWSINNGSCT 759
W + SCT
Sbjct: 150 AWDLGENSCT 159
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 61/245 (24%), Positives = 94/245 (38%)
Query: 545 MPALPHSGTTSK-PLMMFGTDGAGTLTSPSN---QLWDDKDLELRADMDRL--VEDGSLD 598
MP + G T+ + F DG TS + ++WD + ++ + D V D +
Sbjct: 74 MPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIH 133
Query: 599 DNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGH 658
N LS D + A G + E + V S+ V SDG +L G +
Sbjct: 134 PNQGELLSCDQSGRVRAWDLGENSCTHELIPEED-VPMSSITV-----GSDGSMLIAGNN 187
Query: 659 DKKAVLW----H--TDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 712
+W H L+ + H IT SP + LAT S D TV +W ++
Sbjct: 188 KGNCYVWRMLNHQGASLLQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTEDM 247
Query: 713 GYSL-RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWC 771
+ L R GH V F + L+ + D R W +++G R + C
Sbjct: 248 SFMLERRLQGHQRWVWDCAFSADSTYLV-TASSDHVARLWELSSGETIRQYSGHHKAAVC 306
Query: 772 VNAMN 776
V A+N
Sbjct: 307 V-ALN 310
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 162 (62.1 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 640 KVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
+V CC F +G LA+ G+D+ ++W+ ++ L+ HS + ++ ++ L ++
Sbjct: 58 EVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSA 117
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
S DKTV VWD++ G ++ GH++ V S L C+ DG ++ W I +
Sbjct: 118 STDKTVCVWDSET-GERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKAS 176
Query: 759 TRVFK 763
F+
Sbjct: 177 VHTFQ 181
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/122 (28%), Positives = 65/122 (53%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V+ H+++DG LL + DK +W ++T + L+ H+S + +
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRG 153
Query: 693 PRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
P+LA T S D TV++WD S+ TF ++ V+S+ F+ D +I S D +I+ W
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKA-SVHTFQ-NTYQVLSVTFNDTSDQII-SGGIDNDIKVW 210
Query: 752 SI 753
+
Sbjct: 211 DL 212
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 168 (64.2 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 42/121 (34%), Positives = 59/121 (48%)
Query: 651 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 710
KLLATG D+ A LW + H + V+FSP LAT+S D T+++W
Sbjct: 492 KLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 551
Query: 711 NPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCC 769
+ +S L+TF GH ASV+ + F L+ S DG ++ W+I N C R
Sbjct: 552 D--FSCLKTFEGHDASVLKVAFVSRGTQLLSS-GSDGLVKLWTIKNNECVRTLDAHEDKV 608
Query: 770 W 770
W
Sbjct: 609 W 609
Score = 123 (48.4 bits), Expect = 0.00067, P = 0.00067
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
L+++T H I V +P+ LAT S D+T ++W A L F GH + +
Sbjct: 469 LQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLW-ALPQCQLLGVFSGHRRGLWCV 527
Query: 730 DFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
F P D ++ + DG I+ W++ + SC + F+
Sbjct: 528 QFSP-MDQVLATASADGTIKLWALQDFSCLKTFE 560
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 161 (61.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 37/124 (29%), Positives = 65/124 (52%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSS 699
V+ +FS D +++A+G D + +W T + E+ H+ IT ++FS ++ ++S
Sbjct: 267 VLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSAS 326
Query: 700 FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
FD TVR+ + G L+ F GHS+ V F P+ ++ S DG ++ WS+ C
Sbjct: 327 FDYTVRLHGLKS-GKMLKEFKGHSSFVNEATFTPDGHSVL-SASSDGTVKVWSLKTTECV 384
Query: 760 RVFK 763
+K
Sbjct: 385 ATYK 388
Score = 50 (22.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 16 IHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIART 67
I YL + +L + Q Q E VS + V D+ GF+ + + WD + T
Sbjct: 14 IQQYLKESNLMKTLQTLQEETGVSLNTV--DSVDGFVQDISNGHWDTVLKVT 63
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W+D+ L+L+ ++ + G + ++ S + DA R D+ G K+ S+ A
Sbjct: 49 WNDEKLDLQWTLEGH-QLGVVSVDISHTGSIAASSSLDAHIRLWDLETG---KQIKSIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ +T K + +L+ I + +SP LA
Sbjct: 105 GPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 S 757
+
Sbjct: 223 N 223
Score = 137 (53.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
++ +S DGK LA+G D ++ T K LE H+ I + FSP L T+S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
D ++++D + + T GH + V+++ F P+ D S D ++ W +C
Sbjct: 211 DGYIKIYDVQHANLA-GTLSGHGSWVLNVAFCPD-DTHFVSSSSDKSVKVWDAGTRTCVH 268
Query: 761 VF 762
F
Sbjct: 269 TF 270
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 174 (66.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
S G+LLATGG D + +W + +L H++ I ++ S + S ++RVW
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES 766
D + LRT +GH A++ SLDFHP + S D +I+ W + C +FK +S
Sbjct: 91 DLE-AAKILRTLLGHKANICSLDFHPY-GSFVASGSLDTDIKLWDVRRKGC--IFKYKS 145
Score = 147 (56.8 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G +A+G D LW + H+ + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
D TV++WD G + F GHS V ++FHP+ + L+ S D IR+W +
Sbjct: 168 DHTVKLWDL-TAGKVMFEFTGHSGPVNVVEFHPS-EYLLASGSSDRTIRFWDLEKFHVVS 225
Query: 761 VFKVESFCCWCV 772
+ E+ C+
Sbjct: 226 CIEEEATPVRCI 237
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 828 CCLYTGCGDS 837
CCLY G DS
Sbjct: 244 CCLYGGFQDS 253
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 174 (66.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
S G+LLATGG D + +W + +L H++ I ++ S + S ++RVW
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES 766
D + LRT +GH A++ SLDFHP + S D +I+ W + C +FK +S
Sbjct: 91 DLE-AAKILRTLLGHKANICSLDFHPY-GSFVASGSLDTDIKLWDVRRKGC--IFKYKS 145
Score = 140 (54.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 36/132 (27%), Positives = 58/132 (43%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G +A+G D LW + H+ + +RFSP LA+++
Sbjct: 108 ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
D TV++WD G + F GH V ++FHP+ + L+ S IR+W +
Sbjct: 168 DHTVKLWDL-TAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVS 226
Query: 761 VFKVESFCCWCV 772
+ E+ C+
Sbjct: 227 CIEEEATPVRCI 238
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 828 CCLYTGCGDS 837
CCLY G DS
Sbjct: 245 CCLYGGFQDS 254
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 174 (66.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
S G+LLATGG D + +W + +L H++ I ++ S + S ++RVW
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVW 90
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES 766
D + LRT +GH A++ SLDFHP + S D +I+ W + C +FK +S
Sbjct: 91 DLE-AAKILRTLLGHKANICSLDFHPY-GSFVASGSLDTDIKLWDVRRKGC--IFKYKS 145
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 828 CCLYTGCGDS 837
CCLY G DS
Sbjct: 244 CCLYGGFQDS 253
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMD-VSQGFSFKEANS 633
+LWD LE++ ++ L ++G V H D AG G+D ++ + +
Sbjct: 333 RLWD---LEVQEEI--LHQEGH-SKGVHDLHFHPDGSL--AGTGGLDSFARVWDLRTGRC 384
Query: 634 V---RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSP 690
V ++ +FS +G +ATG D +W + + H +L++ V+F P
Sbjct: 385 VMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQP 444
Query: 691 SMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
+ L T ++D T ++W +PG+S L+T GH VM +D P+ LI +C D
Sbjct: 445 NDGHYLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGVDLSPD-GQLIATCSYDRTF 501
Query: 749 RYW 751
+ W
Sbjct: 502 KLW 504
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 35/108 (32%), Positives = 47/108 (43%)
Query: 645 HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTV 704
HF DG L TGG D A +W T + LE H I + FSP+ +AT S D
Sbjct: 357 HFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNAC 416
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+VWD + T H V S+ F PN + + D + W+
Sbjct: 417 KVWDL-RQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWT 463
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 653 LATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 712
+A+ D LW D+ + ++E HS + V + PS L T+ +D + R+WD +
Sbjct: 281 MASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQ 340
Query: 713 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWSINNGSC 758
L GHS V L FHP D + G D R W + G C
Sbjct: 341 EEILHQ-EGHSKGVHDLHFHP--DGSLAGTGGLDSFARVWDLRTGRC 384
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 35/139 (25%), Positives = 57/139 (41%)
Query: 620 MDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH 679
+D + + E +S+R + + H S G+ L T +D LW + + + E H
Sbjct: 295 LDSDEPIADIEGHSMRVAR---VTWHPS--GRFLGTTCYDHSWRLWDLEVQEEILHQEGH 349
Query: 680 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLI 739
S + D+ F P T D RVWD G + GH + S++F PN +
Sbjct: 350 SKGVHDLHFHPDGSLAGTGGLDSFARVWDL-RTGRCVMFLEGHIKEIYSINFSPNGFH-V 407
Query: 740 CSCDGDGEIRYWSINNGSC 758
+ GD + W + C
Sbjct: 408 ATGSGDNACKVWDLRQRRC 426
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 54/186 (29%), Positives = 81/186 (43%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD-----TDPRDAGGRGMDVSQG--FS 627
+LWD L A + L ++G V H D T DA GR D+ G
Sbjct: 347 RLWD-----LEAQEEILHQEGH-SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F E + ++ +FS +G +ATG D +W + + H +L+T V+
Sbjct: 401 FLEGH-----LKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVK 455
Query: 688 FSPSMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
F P L T ++D T ++W +PG+S L+T GH VM LD + LI +C D
Sbjct: 456 FEPIHGNFLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGLDISSD-GQLIATCSYD 512
Query: 746 GEIRYW 751
+ W
Sbjct: 513 RTFKLW 518
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 32/107 (29%), Positives = 45/107 (42%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F DG L TGG D +W T + LE H I + FSP+ +AT S D T +
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 431
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
VWD + T H V + F P + + + D + W+
Sbjct: 432 VWDL-RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWT 477
>ZFIN|ZDB-GENE-050522-303 [details] [associations]
symbol:fbxw2 "F-box and WD repeat domain containing
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-050522-303 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 CTD:26190 HOVERGEN:HBG051593
KO:K10261 EMBL:BC095232 IPI:IPI00832593 RefSeq:NP_001018175.1
UniGene:Dr.79396 ProteinModelPortal:Q503P7 STRING:Q503P7
GeneID:553942 KEGG:dre:553942 InParanoid:Q503P7 NextBio:20880537
ArrayExpress:Q503P7 Uniprot:Q503P7
Length = 455
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 140 ETSSLIGHSARVYALYYR-DG-LLCTGSDDLSAKLWDVRTGQCVYGIQTHTC--ATVKFD 195
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD T+ W+ G ++ F GH+ +V S+D++ D L+ S D ++
Sbjct: 196 EQ--KLVTGSFDNTIACWEWST-GAKIQQFRGHTGAVFSIDYNDELDTLV-SGSADFTVK 251
Query: 750 YWSINNGSC 758
WS++ G+C
Sbjct: 252 VWSLSAGTC 260
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/197 (24%), Positives = 88/197 (44%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ LEL+ ++ + G + ++ L + DA R D+ G K+ S+ A
Sbjct: 49 WRDERLELQWSLEGH-QLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---KQMKSIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ ++ K + +L+ I + +SP LA
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 SCTRVFKVESFCCWCVN 773
+ + W +N
Sbjct: 223 NLAGT--LSGHASWVLN 237
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K+ S+ ++ +S DGK LA+G D ++ T K LE H+ I +
Sbjct: 137 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
FSP L T+S D ++++D + + T GH++ V+++ F P+ D S D
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFCPD-DTHFVSSSSDK 254
Query: 747 EIRYWSINNGSCTRVF 762
++ W + +C F
Sbjct: 255 SVKVWDVGTRTCIHTF 270
Score = 117 (46.2 bits), Expect = 0.00067, P = 0.00067
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LL T D ++ L H+S + +V F P +SS DK+V+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 257
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
VWD + TF H V + ++ N ++ S D EI +
Sbjct: 258 VWDVGTRT-CIHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHVY 301
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 54/186 (29%), Positives = 81/186 (43%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD-----TDPRDAGGRGMDVSQG--FS 627
+LWD L A + L ++G V H D T DA GR D+ G
Sbjct: 363 RLWD-----LEAQEEILHQEGH-SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 416
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F E + ++ +FS +G +ATG D +W + + H +L+T V+
Sbjct: 417 FLEGH-----LKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVK 471
Query: 688 FSPSMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
F P L T ++D T ++W +PG+S L+T GH VM LD + LI +C D
Sbjct: 472 FEPIHGNFLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGLDISSD-GQLIATCSYD 528
Query: 746 GEIRYW 751
+ W
Sbjct: 529 RTFKLW 534
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 32/107 (29%), Positives = 45/107 (42%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F DG L TGG D +W T + LE H I + FSP+ +AT S D T +
Sbjct: 388 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 447
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
VWD + T H V + F P + + + D + W+
Sbjct: 448 VWDL-RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWT 493
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 54/186 (29%), Positives = 81/186 (43%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD-----TDPRDAGGRGMDVSQG--FS 627
+LWD L A + L ++G V H D T DA GR D+ G
Sbjct: 365 RLWD-----LEAQEEILHQEGH-SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 418
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F E + ++ +FS +G +ATG D +W + + H +L+T V+
Sbjct: 419 FLEGH-----LKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVK 473
Query: 688 FSPSMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
F P L T ++D T ++W +PG+S L+T GH VM LD + LI +C D
Sbjct: 474 FEPIHGNFLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGLDISSD-GQLIATCSYD 530
Query: 746 GEIRYW 751
+ W
Sbjct: 531 RTFKLW 536
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00082
Identities = 32/107 (29%), Positives = 45/107 (42%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F DG L TGG D +W T + LE H I + FSP+ +AT S D T +
Sbjct: 390 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 449
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
VWD + T H V + F P + + + D + W+
Sbjct: 450 VWDL-RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWT 495
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 164 (62.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 44/181 (24%), Positives = 80/181 (44%)
Query: 586 ADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEA-NSVRASTSKVICC 644
A + R + D L+ V S + + P A + D + + +++ + V C
Sbjct: 63 ARLQRRIND--LEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCV 120
Query: 645 HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR--LATSSFDK 702
F LA+G D +W + + + L+ H ++ + + LA+ S D
Sbjct: 121 AFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDL 180
Query: 703 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
T+++WD ++RT GH SV S+ F + D+ + S DG +R W ++ G C +V
Sbjct: 181 TIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVI 240
Query: 763 K 763
K
Sbjct: 241 K 241
Score = 43 (20.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 828 CCLYTGCGDSSLSSF 842
C + TGC D+S+ F
Sbjct: 429 CVIATGCADNSVRVF 443
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 164 (62.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 44/181 (24%), Positives = 80/181 (44%)
Query: 586 ADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEA-NSVRASTSKVICC 644
A + R + D L+ V S + + P A + D + + +++ + V C
Sbjct: 63 ARLQRRIND--LEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCV 120
Query: 645 HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR--LATSSFDK 702
F LA+G D +W + + + L+ H ++ + + LA+ S D
Sbjct: 121 AFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDL 180
Query: 703 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 762
T+++WD ++RT GH SV S+ F + D+ + S DG +R W ++ G C +V
Sbjct: 181 TIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVI 240
Query: 763 K 763
K
Sbjct: 241 K 241
Score = 43 (20.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 828 CCLYTGCGDSSLSSF 842
C + TGC D+S+ F
Sbjct: 429 CVIATGCADNSVRVF 443
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 167 (63.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F+ G +L +G D + ++W T L H IT V+ L TSS D ++
Sbjct: 109 FNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIK 168
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+WD + + ++T +GH + +D +P++ L CSC D +IR+W I
Sbjct: 169 IWDTETQ-HCIQTIVGHRNPIWGIDVNPDETRL-CSCTSDNQIRFWRI 214
Score = 145 (56.1 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
S V+ +S+D K LA D +++TDT+K +L H + + S + T
Sbjct: 532 SDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITG 591
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
S DK +++W D G ++F H S+M + F P+ I S D I+YW
Sbjct: 592 SADKNIKIWGLDY-GDCHKSFFAHDDSIMQVSFIPSTHHFI-SASKDKRIKYW 642
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 41/126 (32%), Positives = 55/126 (43%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V+C S D L+ TG DK +W D + H I V F PS ++S
Sbjct: 576 VMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASK 635
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DK ++ WDAD + ++T H V SL + D S D IR I N + T
Sbjct: 636 DKRIKYWDADKFEH-IQTIEAHHGEVWSLAMG-SVGDFFISGSHDRSIR---IFNQTETP 690
Query: 761 VFKVES 766
+F VES
Sbjct: 691 IF-VES 695
>DICTYBASE|DDB_G0283005 [details] [associations]
symbol:agtA "UDP-Gal:fucoside
alpha3-galactosyltransferase" species:44689 "Dictyostelium
discoideum" [GO:0035250 "UDP-galactosyltransferase activity"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;TAS] [GO:0004381
"fucosylgalactoside 3-alpha-galactosyltransferase activity"
evidence=IEA] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00378 dictyBase:DDB_G0283005
GO:GO:0005737 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006486 EMBL:AAFI02000049
GO:GO:0035250 EMBL:DQ340632 RefSeq:XP_639311.1
ProteinModelPortal:Q54RP0 CAZy:GT77 EnsemblProtists:DDB0231341
GeneID:8623882 KEGG:ddi:DDB_G0283005 OMA:SSINCIH GO:GO:0004381
InterPro:IPR005069 Pfam:PF03407 Uniprot:Q54RP0
Length = 648
Score = 166 (63.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 653 LATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 712
L T HDK W + +T + H+ +I + P+ T S D T+R +D +N
Sbjct: 398 LLTSSHDKTIQYWDNNLQVIQTFIG-HTGIINQLIVIPNSSYFFTCSDDNTIRQFDLNNI 456
Query: 713 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
+ R F+GH+ V S+ + N + L SC DG IR+W IN+G C + K
Sbjct: 457 NFK-RVFIGHNGWVSSIAINKNLNTLY-SCSNDGTIRFWDINSGRCLNIIK 505
Score = 46 (21.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 585 RADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICC 644
R+ DR +E G N + + + + D + + + FK N ++ T +
Sbjct: 276 RSKKDRFIEYGLWYINDDEIDINSNINNDDENNKEIKL-----FK--NVLKNHTDIITSI 328
Query: 645 HFSSDGKLLATGGHDKKAVLW 665
+ S DGKL T DK +W
Sbjct: 329 NSSDDGKLFTTS-IDKSIKIW 348
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 574 NQLWDDKDLELRAD-----MDRLVEDGSL--DDNVESFLSHDDTD 611
N LW D D+ + D + ++ DD+++ ++ DD D
Sbjct: 127 NVLWTDTDIVWKRDPFIHFYQDINQENQFTNDDDIDLYVQQDDDD 171
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 140 (54.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 626 FSFKEANSVRASTSK---VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSL 682
+S ++ NSVR T V+ FS +GK LA+ G D++ LW + L H+
Sbjct: 7 WSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS 66
Query: 683 ITDVRFSPSMPRLATSSFDKTVRVWD---------AD-NPGYSLRTFMGHSASVMSLDF 731
IT + FSP +A++S D +VRVWD AD + G + + G ++V+S+ F
Sbjct: 67 ITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQF 125
Score = 126 (49.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 30/100 (30%), Positives = 46/100 (46%)
Query: 659 DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 718
DK LW S H + + FSP+ LA++ D+ +++WD + G +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS-GTLFKE 59
Query: 719 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
GH+ S+ SL F P+ LI S D +R W I + C
Sbjct: 60 LRGHTDSITSLAFSPDSG-LIASASMDNSVRVWDIRSTCC 98
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 170 (64.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 39/104 (37%), Positives = 54/104 (51%)
Query: 654 ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 713
A+G HD+ A LW D H + + V+F P+ LAT S DKTVR+W A G
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-G 458
Query: 714 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
S+R F GH V+SL F PN + S D ++ W + +G+
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLASGT 501
Score = 160 (61.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C F + LATG DK LW S H + + FSP+ LA++
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
D+ +++WD + G + GH+ ++ SL F P+ LI S D +R W I N C+
Sbjct: 489 DQRLKLWDLAS-GTLFKELRGHTDNITSLTFSPDSS-LIASASMDNSVRVWDIRNTHCS 545
Score = 156 (60.0 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 39/133 (29%), Positives = 56/133 (42%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +R V F +D L + D W + + + H+ + DV S
Sbjct: 334 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS 393
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P A+ S D+T R+W D Y LR + GH A V + FHPN + L D +R
Sbjct: 394 PYSLYFASGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGST-DKTVR 451
Query: 750 YWSINNGSCTRVF 762
WS G+ R+F
Sbjct: 452 LWSAQQGNSVRLF 464
Score = 145 (56.1 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 52/177 (29%), Positives = 82/177 (46%)
Query: 557 PLMMFGTDGAGTLTSPSNQLWD-DKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDA 615
P ++ G+ T+ +LW D+ LR + G L D V+ H +++
Sbjct: 394 PYSLYFASGSHDRTA---RLWSFDRTYPLR------IYAGHLAD-VDCVKFHPNSNYLAT 443
Query: 616 GGRGMDVSQGFSFKEANSVRASTSK---VICCHFSSDGKLLATGGHDKKAVLWHTDTLKS 672
G V +S ++ NSVR T V+ FS +GK LA+ G D++ LW +
Sbjct: 444 GSTDKTVRL-WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 729
L H+ IT + FSP +A++S D +VRVWD N S T G S+ ++ +
Sbjct: 503 FKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTD-GSSSELVGV 558
Score = 40 (19.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 12 LDVYIHDYLVKRDLKASAQAF 32
L VY+H LV+ K++ ++F
Sbjct: 99 LFVYLHLNLVQNSAKSTVESF 119
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 47/181 (25%), Positives = 84/181 (46%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ LEL+ ++ + G + N+ + + DA R D+ G K+ S+ A
Sbjct: 49 WSDEKLELQWTLEGH-QLGVVSVNISQNGAIAASSSLDAHIRLWDLETG---KQIKSMDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D K +ATG H K ++ ++ K + +L+ I + +SP LA
Sbjct: 105 GPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 S 757
+
Sbjct: 223 N 223
Score = 153 (58.9 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K+ +S+ ++ +S DGK LA+G D ++ T K LE H+ I +
Sbjct: 137 SGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
FSP L T+S D ++++D + + T GH + V+S+ F P+ D S D
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHGSWVLSVAFSPD-DTHFVSSSSDK 254
Query: 747 EIRYWSINNGSCTRVFKVESFCCWCV 772
I+ W ++ SC F W V
Sbjct: 255 SIKVWDTSSRSCVNTFFDHQDQVWSV 280
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LL T D ++ L H S + V FSP +SS DK+++
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIK 257
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD 743
VWD + + TF H V S+ ++P ++ + D
Sbjct: 258 VWDTSSRS-CVNTFFDHQDQVWSVKYNPTGSKIVSAGD 294
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 170 (64.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 639 SKVICC-HFSSDGKLLATGGHDKKAVL-WHTDTLKSKT-------NLEEHSSL-----IT 684
S V+CC FS DGK +ATG + V T L +K N +++++ I
Sbjct: 200 SSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIR 259
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG 744
V FSP LAT + DK +R+WD ++ GH + SLDF P+ D L+ S G
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIWDLSTKRI-IKILRGHEQDIYSLDFFPDGDRLV-SGSG 317
Query: 745 DGEIRYWSINNGSCTRVFKVE 765
D +R W + C+ +E
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE 338
Score = 137 (53.3 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 38/128 (29%), Positives = 57/128 (44%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K+ N+ + + FS DGKLLATG DK +W T + L H I + F
Sbjct: 246 KDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDF 305
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
P RL + S D++VR+WD SL + + +++ P+ LI + D +
Sbjct: 306 FPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVS--PD-GKLIAAGSLDRTV 362
Query: 749 RYWSINNG 756
R W G
Sbjct: 363 RVWDSTTG 370
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 480 TLDGSMSNSFRGNDQVSKNQTGRKRKQ 506
T D M N F+ Q + Q ++++Q
Sbjct: 85 TRDRQMKNGFQQQQQQQQQQQQQQQQQ 111
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 170 (64.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 639 SKVICC-HFSSDGKLLATGGHDKKAVL-WHTDTLKSKT-------NLEEHSSL-----IT 684
S V+CC FS DGK +ATG + V T L +K N +++++ I
Sbjct: 200 SSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIR 259
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG 744
V FSP LAT + DK +R+WD ++ GH + SLDF P+ D L+ S G
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIWDLSTKRI-IKILRGHEQDIYSLDFFPDGDRLV-SGSG 317
Query: 745 DGEIRYWSINNGSCTRVFKVE 765
D +R W + C+ +E
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE 338
Score = 137 (53.3 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 38/128 (29%), Positives = 57/128 (44%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K+ N+ + + FS DGKLLATG DK +W T + L H I + F
Sbjct: 246 KDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDF 305
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
P RL + S D++VR+WD SL + + +++ P+ LI + D +
Sbjct: 306 FPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVS--PD-GKLIAAGSLDRTV 362
Query: 749 RYWSINNG 756
R W G
Sbjct: 363 RVWDSTTG 370
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 480 TLDGSMSNSFRGNDQVSKNQTGRKRKQ 506
T D M N F+ Q + Q ++++Q
Sbjct: 85 TRDRQMKNGFQQQQQQQQQQQQQQQQQ 111
>RGD|1307881 [details] [associations]
symbol:Rrp9 "ribosomal RNA processing 9, small subunit (SSU)
processome component, homolog (yeast)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307881 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH473954
GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732 KO:K14793
CTD:9136 HOVERGEN:HBG079296 OrthoDB:EOG4XKV6X EMBL:BC158778
IPI:IPI00869600 RefSeq:NP_001102248.1 UniGene:Rn.11840
STRING:B0BND5 Ensembl:ENSRNOT00000017469 GeneID:363134
KEGG:rno:363134 NextBio:682561 Genevestigator:B0BND5 Uniprot:B0BND5
Length = 478
Score = 167 (63.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
+S ++C SSDGK LA+G K ++W + + H ++ + F +L +
Sbjct: 202 SSHILCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYS 261
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S D++V+VW+A Y + T GH +V +LD +++ + + DG +R W I S
Sbjct: 262 TSHDRSVKVWNAAENSY-VETLFGHQDAVAALDAL-SRECCVTAGGRDGTVRVWKIPEES 319
Query: 758 CTRVFKVESFCCWCVNAMNRPCLWDKLDAGDIQI 791
VF C++ +N + D G + +
Sbjct: 320 -QLVFYGHQGSIDCIHLINEEHMVSGADDGSVAL 352
Score = 40 (19.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 474 GPAGSVTLDGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANS 516
GP G+ +DG K++ G K + +SS + S
Sbjct: 19 GP-GAAPVDGKRRRKVDSAASRGKSKGGGKMNEEISSDSESES 60
Score = 37 (18.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 10 KMLDVYIHDYLVKRDLKASAQAF---QAEGKVSSD 41
++ +Y+ + + KA A+AF Q G++ D
Sbjct: 84 RLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKED 118
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
+++ +A T+ V FS+DG+ LAT DK +W+ + +L H+ + +FS
Sbjct: 94 KSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFS 153
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + + S DKT+++WD N + F +DF+PN I S D ++
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFVDFNPN-GTCIASAGSDHTVK 211
Query: 750 YWSINNGSCTRVFKVESFCCWCVN 773
W I + ++V S CV+
Sbjct: 212 IWDIRVNKLLQHYQVHSGGVNCVS 235
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 37/108 (34%), Positives = 54/108 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS GK LAT D +LW+ H ++T V+FSP LA++S D+TVR
Sbjct: 26 FSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVR 85
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+W D G S F H+A V S+DF + + + D I+ W++
Sbjct: 86 LWIPDKRGKSSE-FKAHTAPVRSVDFSAD-GQFLATASEDKSIKVWNM 131
Score = 147 (56.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 38/122 (31%), Positives = 55/122 (45%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V FS G LLA+ D+ LW D + + H++ + V FS LAT+S
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DK+++VW+ + L + H+ V F P+ LI SC D I+ W N C
Sbjct: 123 DKSIKVWNMYRQRF-LYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 761 VF 762
F
Sbjct: 181 NF 182
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTV 704
F D LLATG ++ + +W T K NL +H+ ++ D+ F+P L ++S DKT+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
RVWD + G ++ GH V S F P+ ++CS + W+++ T + K+
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLWNMDK--YTMIRKL 252
Query: 765 E 765
E
Sbjct: 253 E 253
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 46/152 (30%), Positives = 65/152 (42%)
Query: 634 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 693
+R + V C FS D +L + G K LW+ D LE H + FSP
Sbjct: 210 LRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGA 269
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGH-----------SAS---VMSLDFHPNKDDL- 738
LAT+S+D V +WD N G L F GH A+ V S+ F + D L
Sbjct: 270 LLATASYDTRVYIWDPHN-GDILMEF-GHLFPPPTPIFAGGANDRWVRSVSF--SHDGLH 325
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES-FCC 769
+ S D +R+W I+ +V + + CC
Sbjct: 326 VASLADDKMVRFWRIDEDYPVQVAPLSNGLCC 357
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTV 704
F D LLATG ++ + +W T K NL +H+ ++ D+ F+P L ++S DKT+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
RVWD + G ++ GH V S F P+ ++CS + W+++ T + K+
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLWNMDK--YTMIRKL 252
Query: 765 E 765
E
Sbjct: 253 E 253
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 46/152 (30%), Positives = 65/152 (42%)
Query: 634 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 693
+R + V C FS D +L + G K LW+ D LE H + FSP
Sbjct: 210 LRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGA 269
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGH-----------SAS---VMSLDFHPNKDDL- 738
LAT+S+D V +WD N G L F GH A+ V S+ F + D L
Sbjct: 270 LLATASYDTRVYIWDPHN-GDILMEF-GHLFPPPTPIFAGGANDRWVRSVSF--SHDGLH 325
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES-FCC 769
+ S D +R+W I+ +V + + CC
Sbjct: 326 VASLADDKMVRFWRIDEDYPVQVAPLSNGLCC 357
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTV 704
F D LLATG ++ + +W T K NL +H+ ++ D+ F+P L ++S DKT+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
RVWD + G ++ GH V S F P+ ++CS + W+++ T + K+
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLWNMDK--YTMIRKL 252
Query: 765 E 765
E
Sbjct: 253 E 253
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 45/152 (29%), Positives = 65/152 (42%)
Query: 634 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 693
+R + V C FS D +L + G K LW+ D LE H + FSP
Sbjct: 210 LRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGA 269
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGH-----------SAS---VMSLDFHPNKDDL- 738
LAT+S+D V +WD + G L F GH A+ V S+ F + D L
Sbjct: 270 LLATASYDTRVYIWDP-HTGAILMEF-GHLFPPPTPIFAGGANDRWVRSVSF--SHDGLH 325
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES-FCC 769
+ S D +R+W I+ +V + + CC
Sbjct: 326 VASLADDKMVRFWRIDEDYPVQVAPLSNGLCC 357
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C + L+ +GG D +W + ++ T L H S ++ V ++ + + ++S
Sbjct: 254 VKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASS 313
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN 755
D+ ++V+D ++TF GH V +L HP +DL S D DG+I YW + N
Sbjct: 314 DQLLKVFDIRTMK-EMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGN 367
>FB|FBgn0033557 [details] [associations]
symbol:CG12325 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 EMBL:BT016114 RefSeq:NP_610618.1 UniGene:Dm.12871
SMR:Q5U0X8 STRING:Q5U0X8 EnsemblMetazoa:FBtr0088227 GeneID:36144
KEGG:dme:Dmel_CG12325 UCSC:CG12325-RA FlyBase:FBgn0033557
InParanoid:Q5U0X8 OrthoDB:EOG4SN03M GenomeRNAi:36144 NextBio:797070
Uniprot:Q5U0X8
Length = 949
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
+S++ C +SSDG+ +ATGG D K LW+T + EH+S +T ++FS + L +
Sbjct: 393 SSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRNKKFLVS 452
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG-EIRYWSINNG 756
SS D TVR +D N + RTF + + S +L+ + D +I WS+ G
Sbjct: 453 SSLDGTVRAFDV-NRYRNFRTFTSPNPAQFSCVAVDYSGELVVAGGQDVFDIFLWSVKTG 511
Query: 757 SCTRV 761
+
Sbjct: 512 KLLEI 516
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FS+D + + +G DK LW+T K E H+ ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKMVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 39/147 (26%), Positives = 68/147 (46%)
Query: 652 LLATGGHDKKAVLW-----HTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
++ + DK ++W T+ + +L+ HS ++DV S + ++D T+R+
Sbjct: 30 MILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRL 89
Query: 707 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES 766
WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C + E
Sbjct: 90 WDLTT-GLTTRRFVGHTKDVLSVAFSADNRQIV-SGSRDKTIKLWN-TLGVCKYTIQDEG 146
Query: 767 FCCW--CV----NAMNR---PCLWDKL 784
W CV N+ N C WDK+
Sbjct: 147 HTEWVSCVRFSPNSSNPIIVSCGWDKM 173
Score = 126 (49.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/111 (27%), Positives = 54/111 (48%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ GH+ V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTIQD-EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN 181
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 163 (62.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 43/186 (23%), Positives = 77/186 (41%)
Query: 610 TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT 669
T RD R DV G + ++ + V C F DG + +GG+D +W+ T
Sbjct: 353 TGSRDTTLRVWDVESG---RHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHT 407
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP-GYS-LRTFMGHSASVM 727
+ L H++ + + F + + S D ++RVWD P G + GH++
Sbjct: 408 GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 728 SLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWCVNAMNRPCLWDKLDAG 787
+ N ++ SC+ D +R W I+ G+C + + R + D G
Sbjct: 468 GMQLRGN---ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDG 524
Query: 788 DIQISD 793
+++ D
Sbjct: 525 TVKLWD 530
Score = 140 (54.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
++++ TS V C + G +L TG D +W ++ + L H + + V+F +
Sbjct: 332 HTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGT 389
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+ + +D TV++W+A + G +RT GH+ V SL F + ++CS D IR W
Sbjct: 390 T--VVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSLLFESERS-IVCSGSLDTSIRVW 445
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 163 (62.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 43/186 (23%), Positives = 77/186 (41%)
Query: 610 TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT 669
T RD R DV G + ++ + V C F DG + +GG+D +W+ T
Sbjct: 353 TGSRDTTLRVWDVESG---RHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHT 407
Query: 670 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP-GYS-LRTFMGHSASVM 727
+ L H++ + + F + + S D ++RVWD P G + GH++
Sbjct: 408 GRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 728 SLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWCVNAMNRPCLWDKLDAG 787
+ N ++ SC+ D +R W I+ G+C + + R + D G
Sbjct: 468 GMQLRGN---ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDG 524
Query: 788 DIQISD 793
+++ D
Sbjct: 525 TVKLWD 530
Score = 140 (54.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
++++ TS V C + G +L TG D +W ++ + L H + + V+F +
Sbjct: 332 HTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGT 389
Query: 692 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+ + +D TV++W+A + G +RT GH+ V SL F + ++CS D IR W
Sbjct: 390 T--VVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSLLFESERS-IVCSGSLDTSIRVW 445
>MGI|MGI:2384313 [details] [associations]
symbol:Rrp9 "RRP9, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2384313 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732
KO:K14793 CTD:9136 HOVERGEN:HBG079296 OMA:AAKDCTI OrthoDB:EOG4XKV6X
EMBL:AF368232 EMBL:AF368234 EMBL:AK076113 EMBL:BC014703
IPI:IPI00128256 RefSeq:NP_663595.1 UniGene:Mm.239997
ProteinModelPortal:Q91WM3 SMR:Q91WM3 STRING:Q91WM3
PhosphoSite:Q91WM3 PaxDb:Q91WM3 PRIDE:Q91WM3
Ensembl:ENSMUST00000047721 GeneID:27966 KEGG:mmu:27966
UCSC:uc009rkb.1 InParanoid:Q91WM3 NextBio:306456 Bgee:Q91WM3
Genevestigator:Q91WM3 GermOnline:ENSMUSG00000041506 Uniprot:Q91WM3
Length = 475
Score = 169 (64.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 41/154 (26%), Positives = 73/154 (47%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
+S V+C SSDGK LA+G K ++W + + H ++ + F +L +
Sbjct: 199 SSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRKGTHQLYS 258
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S D++V+VW+A Y + T GH +V +LD +++ + + DG +R W I S
Sbjct: 259 TSHDRSVKVWNAAENSY-VETLFGHQDAVAALDAL-SRECCVTAGGRDGTVRVWKIPEES 316
Query: 758 CTRVFKVESFCCWCVNAMNRPCLWDKLDAGDIQI 791
VF C++ +N + D G + +
Sbjct: 317 -QLVFYGHQGSIDCIHLINEEHMVSGADDGSVAL 349
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 10 KMLDVYIHDYLVKRDLKASAQAF---QAEGKVSSD 41
++ +Y+ + + KA A+AF Q G++ D
Sbjct: 81 RLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKED 115
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/186 (29%), Positives = 81/186 (43%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD-----TDPRDAGGRGMDVSQG--FS 627
+LWD L A + L ++G V H D T DA GR D+ G
Sbjct: 347 RLWD-----LEAQEEILHQEGH-SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F E + ++ +FS +G +ATG D +W + + H +L+T V+
Sbjct: 401 FLEGH-----LKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVK 455
Query: 688 FSPSMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
F P L T ++D T ++W +PG+S L+T GH VM LD + LI +C D
Sbjct: 456 FEPIHGDFLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGLDISSD-GQLIATCSYD 512
Query: 746 GEIRYW 751
+ W
Sbjct: 513 RTFKLW 518
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 33/107 (30%), Positives = 45/107 (42%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F DG L TGG D +W T + LE H I + FSP+ +AT S D T +
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 431
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
VWD + T H V + F P D + + D + W+
Sbjct: 432 VWDL-RQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWT 477
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 53/180 (29%), Positives = 81/180 (45%)
Query: 594 DGSLDDNVESF-LSHDDTDPRDAGGRGMDVSQGFSFKEANSV-RASTSKVICCHFSSDGK 651
D + +V SF + D+ DP G+ + V A SV A +V FS +
Sbjct: 297 DAARRRSVSSFPVPQDNVDPHPGAGKEVRVPT-----TAMSVFDAHDGEVNAVQFSPGSR 351
Query: 652 LLATGGHDKKAVLWHT--DTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 709
LLATGG D++ LW D + K +L ++ IT + F + L +S D R+W
Sbjct: 352 LLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTV 411
Query: 710 DNPGYSLR-TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFC 768
D+ Y LR T GHS V+S F + ++ S D ++ W + + C + S C
Sbjct: 412 DD--YRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWDLRSKVCIKTVFAGSSC 468
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 48/197 (24%), Positives = 88/197 (44%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ L+L+ ++ + G + ++ L + DA R D+ G K+ S+ A
Sbjct: 49 WRDEKLDLQWSLEGH-QLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---KQIKSIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ ++ K + +L+ I + +SP LA
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 SCTRVFKVESFCCWCVN 773
+ + W +N
Sbjct: 223 NLAGT--LSGHASWVLN 237
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K+ S+ ++ +S DGK LA+G D ++ T K LE H+ I +
Sbjct: 137 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
FSP L T+S D ++++D + + T GH++ V+++ F P+ D S D
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFCPD-DTHFVSSSSDK 254
Query: 747 EIRYWSINNGSCTRVF 762
++ W + +C F
Sbjct: 255 SVKVWDVGTRTCVHTF 270
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LL T D ++ L H+S + +V F P +SS DK+V+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 257
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
VWD + TF H V + ++ N ++ S D EI +
Sbjct: 258 VWDVGTRT-CVHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHIY 301
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 49/197 (24%), Positives = 88/197 (44%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ LEL+ ++ + G + ++ L + DA R D+ G K+ S+ A
Sbjct: 49 WRDERLELQWSLEGH-QLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---KQMKSIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ ++ K + +L+ I + +SP LA
Sbjct: 105 GPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 SCTRVFKVESFCCWCVN 773
+ + W +N
Sbjct: 223 NLAGT--LSGHASWVLN 237
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K+ S+ ++ +S DGK LA+G D ++ T K LE H+ I +
Sbjct: 137 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
FSP L T+S D ++++D + + T GH++ V+++ F P+ D S D
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFCPD-DTHFVSSSSDK 254
Query: 747 EIRYWSINNGSCTRVF 762
++ W + +C F
Sbjct: 255 SVKVWDVGTRTCIHTF 270
Score = 117 (46.2 bits), Expect = 0.00067, P = 0.00067
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LL T D ++ L H+S + +V F P +SS DK+V+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 257
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
VWD + TF H V + ++ N ++ S D EI +
Sbjct: 258 VWDVGTRT-CIHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHVY 301
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTV 704
F D LLATG ++ + +W T K NL +H+ ++ D+ F+P L ++S DKT+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
RVWD + G ++ GH V S F P+ ++CS + W ++ T + K+
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLWDMDK--YTMIRKL 252
Query: 765 E 765
E
Sbjct: 253 E 253
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 634 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 693
+R + V C FS D +L + G K LW D LE H + FSP
Sbjct: 210 LRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHHHDVVACDFSPDGA 269
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGH-----------SAS---VMSLDFHPNKDDL- 738
LAT+S+D V +WD + G L F GH A+ V S+ F + D L
Sbjct: 270 LLATASYDTRVYIWDP-HTGDILMEF-GHLFPPPTPIFAGGANDRWVRSVSF--SHDGLH 325
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES-FCC 769
+ S D +R+W I+ +V + + CC
Sbjct: 326 VASLADDKMVRFWRIDEDYPVQVAPLSNGLCC 357
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNSIVTSSG-DTTCALWDIETGQQKTVFLGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D T ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDFKLFISGACDATAKLWDV-REGTCRQTFSGHESDINAICFFPN-GEAICTGSDDATC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + V+ ES C
Sbjct: 251 RLFDLRADQELIVYSHESIIC 271
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 171 (65.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 40/119 (33%), Positives = 61/119 (51%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
S G+LLATGG D + +W L+ L H++ I ++ S + S ++RVW
Sbjct: 31 STGRLLATGGDDCRVNVWSVAQLRHDL-LTGHTTPIESLQISAKEELIVAGSQSGSIRVW 89
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES 766
D + LRT +GH A++ SLDFHP + S D +I+ W + C +FK +S
Sbjct: 90 DLE-AAKILRTLLGHKANICSLDFHPY-GSFVASGSLDTDIKLWDVRRKGC--IFKYKS 144
Score = 140 (54.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 36/132 (27%), Positives = 58/132 (43%)
Query: 642 ICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
IC F G +A+G D LW + H+ + +RFSP LA+++
Sbjct: 107 ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 166
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
D TV++WD G + F GH V ++FHP+ + L+ S IR+W +
Sbjct: 167 DHTVKLWDL-TAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVS 225
Query: 761 VFKVESFCCWCV 772
+ E+ C+
Sbjct: 226 CIEEEATPVRCI 237
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 828 CCLYTGCGDS 837
CCLY G DS
Sbjct: 244 CCLYGGFQDS 253
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 39/124 (31%), Positives = 64/124 (51%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSP--SMPR 694
T V+ FS+D + + +G DK LW+T K + H+ ++ VRFSP S P
Sbjct: 105 TKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPI 164
Query: 695 LATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
+ + +DK V+VW+ N L+T +GH+ + ++ P D +C+ G DG+ W
Sbjct: 165 IVSCGWDKMVKVWNLAN--CKLKTNHIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWD 220
Query: 753 INNG 756
+N G
Sbjct: 221 LNEG 224
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/149 (27%), Positives = 68/149 (45%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTN-------LEEHSSLITDVRFSPSMPRLATSSFDKTV 704
++ + DK ++W + +TN L HS ++DV S + S+D T+
Sbjct: 30 MILSASRDKTIIMWKLT--RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKV 764
R+WD G + R F+GH+ V+S+ F + ++ S D I+ W+ G C +
Sbjct: 88 RLWDLTT-GTTTRRFVGHTKDVLSVAFSADNRQIV-SGSRDKTIKLWN-TLGVCKYTIQD 144
Query: 765 ESFCCW--CV----NAMNR---PCLWDKL 784
+S W CV N+ N C WDK+
Sbjct: 145 DSHTEWVSCVRFSPNSSNPIIVSCGWDKM 173
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D LW T + H+ + V FS ++ + S DKT+++
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 707 WDADNP-GYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y+++ H+ V + F PN + +I SC D ++ W++ N
Sbjct: 132 WNTLGVCKYTIQDD-SHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN 181
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 36/118 (30%), Positives = 52/118 (44%)
Query: 638 TSKVICCHFS--SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL 695
T V C FS S ++ + G DK +W+ K KTN H+ + V SP
Sbjct: 148 TEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207
Query: 696 ATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
A+ D +WD N G L T G ++ +L F PN+ L C+ G I+ W +
Sbjct: 208 ASGGKDGQAMLWDL-NEGKHLYTLDGGD-TINALCFSPNRYWL-CAATGPS-IKIWDL 261
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/197 (24%), Positives = 88/197 (44%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ L+L+ ++ + G + ++ L + DA R D+ G K+ S+ A
Sbjct: 49 WRDERLDLQWSLEGH-QLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---KQIKSIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ ++ K + +L+ I + +SP LA
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 SCTRVFKVESFCCWCVN 773
+ + W +N
Sbjct: 223 NLAGT--LSGHASWVLN 237
Score = 143 (55.4 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K+ S+ ++ +S DGK LA+G D ++ T K LE H+ I +
Sbjct: 137 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
FSP L T+S D ++++D + + T GH++ V+++ F P+ D S D
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFCPD-DTHFVSSSSDK 254
Query: 747 EIRYWSINNGSCTRVF 762
++ W + +C F
Sbjct: 255 SVKVWDVGTRTCVHTF 270
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 166 (63.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 35/103 (33%), Positives = 53/103 (51%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 711
L +GG D K +W+ T + L H + V F P +P + ++S D+T+R+W+ N
Sbjct: 65 LFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQN 124
Query: 712 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
+ T GH+ VM FHP +DLI S D +R W I+
Sbjct: 125 RSL-ICTMTGHNHYVMCAQFHPT-EDLIASASLDQSVRIWDIS 165
Score = 134 (52.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 34/123 (27%), Positives = 61/123 (49%)
Query: 653 LATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD-ADN 711
+A + + + +TD + K LE H + V F PS+P + ++ D+ +++W +D
Sbjct: 183 MARANNAQADMFGNTDAVV-KFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSDT 241
Query: 712 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCWC 771
+ + T GH + + FHP++D LI S D IR W +N + + FK + W
Sbjct: 242 KAWEVDTCRGHFQNASACLFHPHQD-LILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWV 300
Query: 772 VNA 774
+ A
Sbjct: 301 IAA 303
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 40/140 (28%), Positives = 65/140 (46%)
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDV 686
++ +++ + V C FS D ++LATG D K +W +T + H+ + V
Sbjct: 254 YQAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAV 313
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
RFS + + D VRV + G L+ GHS+ + + + + +I SC DG
Sbjct: 314 RFSKDNSHILSGGNDHVVRVHGMKS-GKCLKEMRGHSSYITDVRYSDEGNHII-SCSTDG 371
Query: 747 EIRYWSINNGSCTRVFKVES 766
IR W +G C F+V S
Sbjct: 372 SIRVWHGKSGECLSTFRVGS 391
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/126 (37%), Positives = 66/126 (52%)
Query: 639 SKVIC-CHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSS------LITDVRFSPS 691
+ VIC FS+DGK LATG + + A++++ +T K T L+E SS + V FSP
Sbjct: 299 TSVICYVRFSADGKFLATGCN-RAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPD 357
Query: 692 MPRLATSSFDKTVRVWD-ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRY 750
LAT D+ +R+WD A Y L T GH + SLDF + L+ S GD +
Sbjct: 358 GKYLATGVEDQQIRIWDIAQKRVYRLLT--GHEQEIYSLDFSKDGKTLV-SGSGDRTVCL 414
Query: 751 WSINNG 756
W + G
Sbjct: 415 WDVEAG 420
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 59/214 (27%), Positives = 83/214 (38%)
Query: 561 FGTDGAGTLTSPSNQ----LWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAG 616
F DG TL S S LWD + A +L+ DD V + + D AG
Sbjct: 396 FSKDGK-TLVSGSGDRTVCLWD-----VEAGEQKLILH--TDDGVTTVMFSPDGQFIAAG 447
Query: 617 GRGMDV----SQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS 672
+ S G ++ + S V FS DGK L +G D LW + +
Sbjct: 448 SLDKVIRIWTSSGTLVEQLHGHEESVYSVA---FSPDGKYLVSGSLDNTIKLWELQCVSN 504
Query: 673 ------------KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM 720
K H I V SP + + S D+T++ W D+P +S T
Sbjct: 505 VAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSP-HSQLTLQ 563
Query: 721 GHSASVMSLDFHPNKDDLICSCDGDGEIR--YWS 752
GH+ SV+S+ PN C G G++R WS
Sbjct: 564 GHNNSVISVAVSPNGH---CFATGSGDLRARIWS 594
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 170 (64.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 39/104 (37%), Positives = 54/104 (51%)
Query: 654 ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 713
A+G HD+ A LW D H + + V+F P+ LAT S DKTVR+W A G
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-G 458
Query: 714 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
S+R F GH V+SL F PN + S D ++ W + +G+
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLASGT 501
Score = 157 (60.3 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C F + LATG DK LW S H + + FSP+ LA++
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
D+ +++WD + G + GH+ ++ SL F P+ LI S D +R W I N C+
Sbjct: 489 DQRLKLWDLAS-GTLYKELRGHTDNITSLTFSPDSG-LIASASMDNSVRVWDIRNTYCS 545
Score = 153 (58.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +R V F +D L + D W + + + H+ + D+ S
Sbjct: 334 EMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 393
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P A+ S D+T R+W D Y LR + GH A V + FHPN + L D +R
Sbjct: 394 PYSLYFASGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGST-DKTVR 451
Query: 750 YWSINNGSCTRVF 762
WS G+ R+F
Sbjct: 452 LWSAQQGNSVRLF 464
Score = 143 (55.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 557 PLMMFGTDGAGTLTSPSNQLWD-DKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDA 615
P ++ G+ T+ +LW D+ LR + G L D V+ H +++
Sbjct: 394 PYSLYFASGSHDRTA---RLWSFDRTYPLR------IYAGHLAD-VDCVKFHPNSNYLAT 443
Query: 616 GGRGMDVSQGFSFKEANSVRASTSK---VICCHFSSDGKLLATGGHDKKAVLWHTDTLKS 672
G V +S ++ NSVR T V+ FS +GK LA+ G D++ LW +
Sbjct: 444 GSTDKTVRL-WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 711
L H+ IT + FSP +A++S D +VRVWD N
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRN 541
Score = 38 (18.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 12 LDVYIHDYLVKRDLKASAQAF 32
L VY+H LV+ K++ ++F
Sbjct: 99 LFVYLHLNLVQNSPKSTVESF 119
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/135 (29%), Positives = 72/135 (53%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT--DTLKSKTNLEEHSSLITDVRFSPS--MP 693
T V+ FS+D + + + D+ LW+T + + + + H ++ VRFSP+ +P
Sbjct: 105 TKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVP 164
Query: 694 RLATSSFDKTVRVWDADNPGYSLR-TFMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYW 751
+ ++S+DKTV+VW+ N LR T GHS + ++ P D +C+ G DG I W
Sbjct: 165 TIVSASWDKTVKVWNLQN--CKLRNTLAGHSGYLNTVAVSP--DGSLCASGGKDGVILLW 220
Query: 752 SINNGSCTRVFKVES 766
+ G +++ +E+
Sbjct: 221 DLAEGK--KLYSLEA 233
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D + LW T +S H+ + V FS ++ ++S D+T+++
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 707 WDA-DNPGYSLRTFMGHSASVMSLDFHPNK-DDLICSCDGDGEIRYWSINN 755
W+ Y++ GH V + F PN I S D ++ W++ N
Sbjct: 132 WNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 652 LLATGGHDKKAVLWH-TDTLKS----KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
++ T DK +LW T KS + + HS + DV S + S+D +R+
Sbjct: 30 VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRL 89
Query: 707 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 758
WD G S R F+GH+ V+S+ F + ++ S D I+ W+ G C
Sbjct: 90 WDLAT-GESTRRFVGHTKDVLSVAFSTDNRQIV-SASRDRTIKLWN-TLGEC 138
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 677 EEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 736
E H + +T ++F + TSS D TV+VWD +P R + H V + HPN+
Sbjct: 97 EGHKNNVTSLQFQADNKWMVTSSEDGTVKVWDVRSPSVQ-RNYK-HQCPVNEVVIHPNQG 154
Query: 737 DLICSCDGDGEIRYWSINNGSCT 759
+LI SCD DG IR W + SCT
Sbjct: 155 ELI-SCDQDGNIRVWDLGENSCT 176
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/137 (29%), Positives = 58/137 (42%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNL------EEHSSLITDVRFSPSMPRLATSSF 700
+SDG +L G + +W + T L HS IT V S M LAT S
Sbjct: 193 ASDGSMLVAGNNKGNCYVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSA 252
Query: 701 DKTVRVWDADNPGYSLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
D T R+W + ++L T + GH V F + L+ +C D +R W ++N
Sbjct: 253 DHTARIWSTEQ-NFNLETTLQGHQRWVWDCAFSADSAYLVTACS-DHYVRLWDLSNSETV 310
Query: 760 RVFKVESFCCWCVNAMN 776
R + CV A+N
Sbjct: 311 RQYNGHHKGAVCV-ALN 326
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 48/197 (24%), Positives = 88/197 (44%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ L+L+ ++ + G + ++ L + DA R D+ G K+ S+ A
Sbjct: 49 WRDERLDLQWSLEGH-QLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---KQIKSIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ ++ K + +L+ I + +SP LA
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 SCTRVFKVESFCCWCVN 773
+ + W +N
Sbjct: 223 NLAGT--LSGHASWVLN 237
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K+ S+ ++ +S DGK LA+G D ++ T K LE H+ I +
Sbjct: 137 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
FSP L T+S D ++++D + + T GH++ V+++ F P+ D S D
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFCPD-DTHFVSSSSDK 254
Query: 747 EIRYWSINNGSCTRVF 762
++ W + +C F
Sbjct: 255 SVKVWDVGTRTCVHTF 270
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LL T D ++ L H+S + +V F P +SS DK+V+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 257
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
VWD + TF H V + ++ N ++ S D EI +
Sbjct: 258 VWDVGTRT-CVHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHIY 301
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 35/134 (26%), Positives = 64/134 (47%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
G +F ++A S ++ +S+ + L +G + W + + N+ H++ +
Sbjct: 164 GMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPN-FNNVNNISAHANGVR 222
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG 744
D+ FSP+ + T D +++W+ +N G RT GH V S D+HPN LI S
Sbjct: 223 DIAFSPNDSKFLTCGDDSAIKIWNFNN-GKEERTLSGHHWEVKSADWHPNLG-LIVSGSK 280
Query: 745 DGEIRYWSINNGSC 758
D ++ W + +C
Sbjct: 281 DNLVKLWDPRSANC 294
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/138 (24%), Positives = 63/138 (45%)
Query: 620 MDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH 679
+D+ F +N V+ + + V ++ +G+ L H + LW+ T +T ++ H
Sbjct: 120 LDLQTKFVHLSSNKVKHTINTV---KWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAH 176
Query: 680 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDL 738
S I +++S L + + TV+ W P ++ + H+ V + F PN D
Sbjct: 177 ESPILTMKYSNHDEWLLSGDQNGTVKYWQ---PNFNNVNNISAHANGVRDIAFSPN-DSK 232
Query: 739 ICSCDGDGEIRYWSINNG 756
+C D I+ W+ NNG
Sbjct: 233 FLTCGDDSAIKIWNFNNG 250
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 35/134 (26%), Positives = 64/134 (47%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
G +F ++A S ++ +S+ + L +G + W + + N+ H++ +
Sbjct: 164 GMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPN-FNNVNNISAHANGVR 222
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG 744
D+ FSP+ + T D +++W+ +N G RT GH V S D+HPN LI S
Sbjct: 223 DIAFSPNDSKFLTCGDDSAIKIWNFNN-GKEERTLSGHHWEVKSADWHPNLG-LIVSGSK 280
Query: 745 DGEIRYWSINNGSC 758
D ++ W + +C
Sbjct: 281 DNLVKLWDPRSANC 294
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/138 (24%), Positives = 63/138 (45%)
Query: 620 MDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH 679
+D+ F +N V+ + + V ++ +G+ L H + LW+ T +T ++ H
Sbjct: 120 LDLQTKFVHLSSNKVKHTINTV---KWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAH 176
Query: 680 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDL 738
S I +++S L + + TV+ W P ++ + H+ V + F PN D
Sbjct: 177 ESPILTMKYSNHDEWLLSGDQNGTVKYWQ---PNFNNVNNISAHANGVRDIAFSPN-DSK 232
Query: 739 ICSCDGDGEIRYWSINNG 756
+C D I+ W+ NNG
Sbjct: 233 FLTCGDDSAIKIWNFNNG 250
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
GF K +++ + V+ C FS DG++L +G DK +++ T+T L +H+ +T
Sbjct: 226 GFELKYKSTLTGHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVT 285
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDAD 710
F+P++ LAT S DKTV +W D
Sbjct: 286 TCAFAPNILLLATGSMDKTVNIWQFD 311
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 40/143 (27%), Positives = 62/143 (43%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLA 696
T V CC FS G +LA+ D VLW T + +E+ S S + RFSP L
Sbjct: 54 TYAVHCCCFSPSGHILASCSTDGTTVLWDTQNGQILAVMEQPSGSPVRVCRFSPDSTCLV 113
Query: 697 TSSFDKTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN 755
+ + D TV +W+A + Y L R S+++ F P +L + G++ W +
Sbjct: 114 SGASDGTVVLWNAQS--YKLHRCASVKDGSLVACAFFP-PGNLFVTGSSCGDLTVWD-DK 169
Query: 756 GSCTRVFKVESFCCWCVNAMNRP 778
C K C + ++P
Sbjct: 170 MRCLHSEKAHDLGITCCDFSSQP 192
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 170 (64.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 39/104 (37%), Positives = 54/104 (51%)
Query: 654 ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 713
A+G HD+ A LW D H + + V+F P+ LAT S DKTVR+W A G
Sbjct: 418 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ-G 476
Query: 714 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
S+R F GH V+SL F PN + S D ++ W + +G+
Sbjct: 477 NSVRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLASGT 519
Score = 158 (60.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V C F + LATG DK LW S H + + FSP+ LA++
Sbjct: 447 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 506
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 759
D+ +++WD + G + GH+ ++ SL F P+ LI S D +R W I N C+
Sbjct: 507 DQRLKLWDLAS-GTLYKELRGHTDNITSLTFSPDSS-LIASASMDNSVRVWDIRNTYCS 563
Score = 153 (58.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +R V F +D L + D W + + + H+ + D+ S
Sbjct: 352 EMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 411
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P A+ S D+T R+W D Y LR + GH A V + FHPN + L D +R
Sbjct: 412 PYSLYFASGSHDRTARLWSFDRT-YPLRIYAGHLADVDCVKFHPNSNYLATGST-DKTVR 469
Query: 750 YWSINNGSCTRVF 762
WS G+ R+F
Sbjct: 470 LWSAQQGNSVRLF 482
Score = 144 (55.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 557 PLMMFGTDGAGTLTSPSNQLWD-DKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDA 615
P ++ G+ T+ +LW D+ LR + G L D V+ H +++
Sbjct: 412 PYSLYFASGSHDRTA---RLWSFDRTYPLR------IYAGHLAD-VDCVKFHPNSNYLAT 461
Query: 616 GGRGMDVSQGFSFKEANSVRASTSK---VICCHFSSDGKLLATGGHDKKAVLWHTDTLKS 672
G V +S ++ NSVR T V+ FS +GK LA+ G D++ LW +
Sbjct: 462 GSTDKTVRL-WSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 520
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 711
L H+ IT + FSP +A++S D +VRVWD N
Sbjct: 521 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN 559
Score = 38 (18.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 12 LDVYIHDYLVKRDLKASAQAF 32
L VY+H LV+ K++ ++F
Sbjct: 117 LFVYLHLNLVQNSPKSTVESF 137
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
GF K +++ + V+ C FS DG++L +G DK +++ T+T L +H+ +T
Sbjct: 226 GFELKYKSTLTGHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVT 285
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDAD 710
F+P++ LAT S DKTV +W D
Sbjct: 286 TCAFAPNILLLATGSMDKTVNIWQFD 311
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 40/143 (27%), Positives = 62/143 (43%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLA 696
T V CC FS G +LA+ D VLW T + +E+ S S + RFSP L
Sbjct: 54 TYAVHCCCFSPSGHILASCSTDGTTVLWDTQNGQILAVMEQPSGSPVRVCRFSPDSTCLV 113
Query: 697 TSSFDKTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN 755
+ + D TV +W+A + Y L R S+++ F P +L + G++ W +
Sbjct: 114 SGASDGTVVLWNAQS--YKLHRCASVKDGSLVACAFFP-PGNLFVTGSSCGDLTVWD-DK 169
Query: 756 GSCTRVFKVESFCCWCVNAMNRP 778
C K C + ++P
Sbjct: 170 MRCLHSEKAHDLGITCCDFSSQP 192
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 39/108 (36%), Positives = 55/108 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS +GK LATG D +LW H +IT V+FSP LA++S D+T+R
Sbjct: 26 FSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIR 85
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+W D G S F H+A V S+DF + + S D I+ W++
Sbjct: 86 LWIPDKRGKSSE-FKAHTAPVRSVDFSAD-GQFLASASEDKSIKVWNM 131
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 37/144 (25%), Positives = 66/144 (45%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
+++ +A T+ V FS+DG+ LA+ DK +W+ + +L H+ + +FS
Sbjct: 94 KSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFS 153
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + + S DKT+++WD N + F + F+PN I S D ++
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDFVGFANFVAFNPN-GTCIASAGSDHTVK 211
Query: 750 YWSINNGSCTRVFKVESFCCWCVN 773
W I + ++V S CV+
Sbjct: 212 IWDIRVNKLLQHYQVHSGGVNCVS 235
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
TS V+ S D + + +G DK +W+ K HS ++ VRFSP+ L
Sbjct: 105 TSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLT 164
Query: 697 --TSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWS 752
++ +DK V+VWD + +SLRT GH+ V ++ P D +C+ G DG + W
Sbjct: 165 FVSAGWDKAVKVWDLET--FSLRTSHYGHTGYVSAVTISP--DGSLCASGGRDGTLMLWD 220
Query: 753 INNGSCTRVFKVES 766
+N T ++ +E+
Sbjct: 221 LNES--THLYSLEA 232
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 652 LLATGGHDKKAVLWHT--DTLK---SKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
+L +G DK +LW+ D + ++ L HS ++D S ++S+DKT+R+
Sbjct: 30 ILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRL 89
Query: 707 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVES 766
WD + G F+GH++ V+S+ P+ ++ S D I+ W+I G+C
Sbjct: 90 WDLEK-GECTHQFVGHTSDVLSVSISPDNRQVV-SGSRDKTIKIWNII-GNCKYTITDGG 146
Query: 767 FCCW--CVNAMNRP 778
W CV P
Sbjct: 147 HSDWVSCVRFSPNP 160
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/116 (28%), Positives = 52/116 (44%)
Query: 644 CHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKT 703
C S D + DK LW + + H+S + V SP ++ + S DKT
Sbjct: 69 CALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKT 128
Query: 704 VRVWDA-DNPGYSLRTFMGHSASVMSLDFHPNKDDL-ICSCDGDGEIRYWSINNGS 757
+++W+ N Y++ T GHS V + F PN D+L S D ++ W + S
Sbjct: 129 IKIWNIIGNCKYTI-TDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS 183
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 54/186 (29%), Positives = 80/186 (43%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD-----TDPRDAGGRGMDVSQG--FS 627
+LWD L A + L ++G V H D T DA GR D+ G
Sbjct: 347 RLWD-----LEAQEEILHQEGH-SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F E + ++ FS +G +ATG D +W + + H +L+T V+
Sbjct: 401 FLEGH-----LKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVK 455
Query: 688 FSPSMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
F P L T ++D T ++W +PG+S L+T GH VM LD + LI +C D
Sbjct: 456 FEPIHGDFLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGLDISSD-GQLIATCSYD 512
Query: 746 GEIRYW 751
+ W
Sbjct: 513 RTFKLW 518
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 33/107 (30%), Positives = 45/107 (42%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
F DG L TGG D +W T + LE H I + FSP+ +AT S D T +
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCK 431
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
VWD + T H V + F P D + + D + W+
Sbjct: 432 VWDL-RQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWT 477
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 48/197 (24%), Positives = 88/197 (44%)
Query: 577 WDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRA 636
W D+ L+L+ ++ + G + ++ L + DA R D+ G K+ S+ A
Sbjct: 49 WCDERLDLQWSLEGH-QLGVVSVDISHTLPIAASSSLDAHIRLWDLDNG---KQIKSIDA 104
Query: 637 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA 696
FS D + LATG H K ++ ++ K + +L+ I + +SP LA
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 697 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 756
+ + D + ++D G L T GH+ + SL F P+ L+ + D DG I+ + + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA 222
Query: 757 SCTRVFKVESFCCWCVN 773
+ + W +N
Sbjct: 223 NLAGT--LSGHASWVLN 237
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 627 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDV 686
S K+ S+ ++ +S DGK LA+G D ++ T K LE H+ I +
Sbjct: 137 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 196
Query: 687 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 746
FSP L T+S D ++++D + + T GH++ V+++ F P+ D S D
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLA-GTLSGHASWVLNVAFCPD-DTHFVSSSSDK 254
Query: 747 EIRYWSINNGSCTRVF 762
++ W + +C F
Sbjct: 255 SVKVWDVGTRTCVHTF 270
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS D +LL T D ++ L H+S + +V F P +SS DK+V+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 257
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
VWD + TF H V + ++ N ++ S D EI +
Sbjct: 258 VWDVGTRT-CVHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHVY 301
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 159 (61.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 38/144 (26%), Positives = 66/144 (45%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
+++ +A T+ V FS+DG+LL T DK +W + +L H+ + +FS
Sbjct: 94 KSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFS 153
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
P + + S DKT+++WD N + F +DF+PN I S D ++
Sbjct: 154 PDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFVDFNPN-GTCIASAGSDHAVK 211
Query: 750 YWSINNGSCTRVFKVESFCCWCVN 773
W I + ++V S C++
Sbjct: 212 IWDIRMNKLLQHYQVHSCGVNCLS 235
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S + + + FS + K +AT D +LW H ++T ++FSP
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
LA++S D+TVR+W D G S F H+A V S+DF + L+ + D I+ WS
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVRSVDFSAD-GQLLVTASEDKSIKVWS 130
Query: 753 I 753
+
Sbjct: 131 M 131
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 36/116 (31%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTV 704
F D LLATG ++ + +W T K NL +H+ ++ D+ F+P L ++S DKT+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
RVWD + G ++ GH V F P+ ++CS + W ++ S R
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSS-ILCSVGASKAVFLWDMDKYSMIR 250
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 48/152 (31%), Positives = 65/152 (42%)
Query: 634 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 693
+R + V C FS D +L + G K LW D LE H + + FSP
Sbjct: 210 LRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPDGA 269
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGH-----------SAS---VMSLDFHPNKDDL- 738
LAT+S+D V VWD G LR F GH A+ V S+ F + D L
Sbjct: 270 LLATASYDTRVYVWDP-YIGVILREF-GHLFPPPTPIFAGGANDRWVRSVSF--SHDGLH 325
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES-FCC 769
I S D +R+W I+ +V + + CC
Sbjct: 326 IASLADDKMVRFWRIDEEYPVQVAPLNNGLCC 357
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 36/116 (31%), Positives = 58/116 (50%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTV 704
F D LLATG ++ + +W T K NL +H+ ++ D+ F+P L ++S DKT+
Sbjct: 136 FGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 705 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
RVWD + G ++ GH V F P+ ++CS + W ++ S R
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSS-ILCSVGASKAVFLWDMDKYSMIR 250
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 48/152 (31%), Positives = 65/152 (42%)
Query: 634 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 693
+R + V C FS D +L + G K LW D LE H + + FSP
Sbjct: 210 LRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPDGA 269
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGH-----------SAS---VMSLDFHPNKDDL- 738
LAT+S+D V VWD G LR F GH A+ V S+ F + D L
Sbjct: 270 LLATASYDTRVYVWDP-YIGVILREF-GHLFPPPTPIFAGGANDRWVRSVSF--SHDGLH 325
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES-FCC 769
I S D +R+W I+ +V + + CC
Sbjct: 326 IASLADDKMVRFWRIDEEYPVQVAPLNNGLCC 357
>UNIPROTKB|B8ZZF2 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511 EMBL:AC008277
HGNC:HGNC:26697 IPI:IPI00915918 ProteinModelPortal:B8ZZF2
SMR:B8ZZF2 Ensembl:ENST00000409124 ArrayExpress:B8ZZF2 Bgee:B8ZZF2
Uniprot:B8ZZF2
Length = 429
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
GF K +++ + V+ C FS DG++L +G DK +++ T+T L +H+ +T
Sbjct: 226 GFELKYKSTLSGHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVT 285
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDAD 710
F+P+ LAT S DKTV +W D
Sbjct: 286 TCAFAPNTLLLATGSMDKTVNIWQFD 311
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 42/145 (28%), Positives = 65/145 (44%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLA 696
T V CC FS G +LA+ D VLW+T+ + +E+ S S + +FSP LA
Sbjct: 54 TYAVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLA 113
Query: 697 TSSFDKTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLIC--SCDGDGEIRYWSI 753
+ + D TV +W+A + Y L R S+ + F PN + SC G++ W
Sbjct: 114 SGAADGTVVLWNAQS--YKLYRCGSVKDGSLAACAFSPNGSFFVTGSSC---GDLTVWD- 167
Query: 754 NNGSCTRVFKVESFCCWCVNAMNRP 778
+ C K C + ++P
Sbjct: 168 DKMRCPHSEKAHDLGITCCDFSSQP 192
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 162 (62.1 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 41/122 (33%), Positives = 59/122 (48%)
Query: 651 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 710
KLLATG D+ A LW + H + V+FSP LAT+S D T+++W
Sbjct: 489 KLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 548
Query: 711 NPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWSINNGSCTRVFKVESFC 768
+ +S L+TF GH ASV+ + F L+ G DG ++ W+I N C +
Sbjct: 549 D--FSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVKTLDAHEDK 606
Query: 769 CW 770
W
Sbjct: 607 VW 608
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 170 (64.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 42/121 (34%), Positives = 59/121 (48%)
Query: 651 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 710
KLLATG D+ A LW + H + V+FSP LAT+S D T+++W
Sbjct: 492 KLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 551
Query: 711 NPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCC 769
+ +S L+TF GH ASV+ + F L+ S DG ++ W+I N C R
Sbjct: 552 D--FSCLKTFEGHDASVLKVAFVSRGTQLLSS-GSDGLLKLWTIKNNECVRTLDAHEDKV 608
Query: 770 W 770
W
Sbjct: 609 W 609
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 33/113 (29%), Positives = 54/113 (47%)
Query: 652 LLATG-GHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 710
LL+ G GH+ V L+++ H I V +P+ LAT S D+T ++W
Sbjct: 455 LLSKGTGHEGGPVF-----LQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALP 509
Query: 711 NPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
L TF GH + + F P D ++ + DG I+ W++ + SC + F+
Sbjct: 510 RCQL-LGTFSGHRRGLWCVQFSP-MDQVLATASADGTIKLWALQDFSCLKTFE 560
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 41/145 (28%), Positives = 57/145 (39%)
Query: 620 MDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE- 678
+DV+ G + + + S D K+L T W S T L +
Sbjct: 50 LDVASGAVLRSLE--QEDQEDITAFDLSPDDKVLVTASRALLLAQWAWQE-GSVTRLWKA 106
Query: 679 -HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 737
H++ + + F P+ LAT D VRVWD Y F G V + FHP+
Sbjct: 107 IHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRC-YGTHHFRGSPGVVHLVAFHPDPAR 165
Query: 738 LIC-SCDGDGEIRYWSINNGSCTRV 761
L+ S D IR WS+ SC V
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAV 190
Score = 40 (19.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 312 GGNNLTLKGWPLTGLEPLRS-GLLQQQKP-FIQAPQPFH 348
G + T+K WPL E L S G + P F+QA H
Sbjct: 440 GSQDCTVKLWPLP--EALLSKGTGHEGGPVFLQAQATQH 476
>UNIPROTKB|Q5ZK75 [details] [associations]
symbol:FBXW2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
GeneTree:ENSGT00700000104359 CTD:26190 HOGENOM:HOG000231971
HOVERGEN:HBG051593 KO:K10261 OMA:QTHTCAT OrthoDB:EOG4KD6M1
EMBL:AADN02026293 EMBL:AJ720209 IPI:IPI00574710
RefSeq:NP_001007843.1 UniGene:Gga.22386 STRING:Q5ZK75
Ensembl:ENSGALT00000001266 GeneID:417088 KEGG:gga:417088
InParanoid:Q5ZK75 NextBio:20820447 Uniprot:Q5ZK75
Length = 454
Score = 158 (60.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 140 ETSSLIGHSARVYALYYR-DG-LLCTGSDDLSAKLWDVSTGQCIYGIQTHTC--ATVKFD 195
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD TV W+ + G + F GH+ +V S+D++ D L+ S D ++
Sbjct: 196 EQ--KLVTGSFDNTVACWEWSS-GAKTQHFRGHTGAVFSVDYNDELDVLV-SGSADFTVK 251
Query: 750 YWSINNGSC 758
W+++ G+C
Sbjct: 252 VWALSTGTC 260
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 158 (60.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
GF K +++ + V+ C FS DG++L +G DK +++ T+T L +H+ +T
Sbjct: 226 GFELKYKSTLSGHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVT 285
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDAD 710
F+P+ LAT S DKTV +W D
Sbjct: 286 TCAFAPNTLLLATGSMDKTVNIWQFD 311
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/145 (28%), Positives = 65/145 (44%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLA 696
T V CC FS G +LA+ D VLW+T+ + +E+ S S + +FSP LA
Sbjct: 54 TYAVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLA 113
Query: 697 TSSFDKTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLIC--SCDGDGEIRYWSI 753
+ + D TV +W+A + Y L R S+ + F PN + SC G++ W
Sbjct: 114 SGAADGTVVLWNAQS--YKLYRCGSVKDGSLAACAFSPNGSFFVTGSSC---GDLTVWD- 167
Query: 754 NNGSCTRVFKVESFCCWCVNAMNRP 778
+ C K C + ++P
Sbjct: 168 DKMRCPHSEKAHDLGITCCDFSSQP 192
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 619 GMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE 678
G S ++K ++ T + FS GK L T DK +W+ D + + L
Sbjct: 68 GASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTG 127
Query: 679 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDL 738
H + D+ +S + ++S DKT+++++ + +T GH+ V +F+P + L
Sbjct: 128 HKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-QSSL 185
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES 766
+ S D +R W + G C + S
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHS 213
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 34/143 (23%), Positives = 66/143 (46%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V CC+F+ L+ +G D+ +W T L HS ++ V F+
Sbjct: 166 TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG 225
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMG-HSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+A+ S+D VR+WD N G ++T + + V + F PN ++ S + D ++ W
Sbjct: 226 SLIASGSYDGLVRIWDTAN-GQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKLW 283
Query: 752 SINNGSCTRVFKVESFCCWCVNA 774
+ G + + +C+ A
Sbjct: 284 DFSKGKTLKQYTGHENSKYCIFA 306
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 619 GMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE 678
G S ++K ++ T + FS GK L T DK +W+ D + + L
Sbjct: 68 GASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTG 127
Query: 679 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDL 738
H + D+ +S + ++S DKT+++++ + +T GH+ V +F+P + L
Sbjct: 128 HKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-QSSL 185
Query: 739 ICSCDGDGEIRYWSINNGSCTRVFKVES 766
+ S D +R W + G C + S
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHS 213
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 34/143 (23%), Positives = 66/143 (46%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ + V CC+F+ L+ +G D+ +W T L HS ++ V F+
Sbjct: 166 TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDG 225
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMG-HSASVMSLDFHPNKDDLICSCDGDGEIRYW 751
+A+ S+D VR+WD N G ++T + + V + F PN ++ S + D ++ W
Sbjct: 226 SLIASGSYDGLVRIWDTAN-GQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKLW 283
Query: 752 SINNGSCTRVFKVESFCCWCVNA 774
+ G + + +C+ A
Sbjct: 284 DFSKGKTLKQYTGHENSKYCIFA 306
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 171 (65.3 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 48/155 (30%), Positives = 71/155 (45%)
Query: 618 RGMDVSQGFSFKEANSVRASTSKVI-CCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL 676
+G G F +A + + K I + + KLLATG D+ A LW +
Sbjct: 458 KGTGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTF 517
Query: 677 EEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNK 735
H + V+FSP LAT+S D T+++W + +S L+TF GH ASV+ + F
Sbjct: 518 SGHRRGLWCVQFSPMDQVLATASADGTIKLWALQD--FSCLKTFEGHDASVLKVAFVSRG 575
Query: 736 DDLICSCDGDGEIRYWSINNGSCTRVFKVESFCCW 770
L+ S DG ++ W+I N C R W
Sbjct: 576 TQLLSS-GSDGLLKLWTIKNNECVRTLDAHEDKVW 609
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 41/145 (28%), Positives = 57/145 (39%)
Query: 620 MDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE- 678
+DV+ G + + + S D K+L T W S T L +
Sbjct: 50 LDVASGAVLRSLE--QEDQEDITAFDLSPDDKVLVTASRALLLAQWAWQE-GSVTRLWKA 106
Query: 679 -HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 737
H++ + + F P+ LAT D VRVWD Y F G V + FHP+
Sbjct: 107 IHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRC-YGTHHFRGSPGVVHLVAFHPDPAR 165
Query: 738 LIC-SCDGDGEIRYWSINNGSCTRV 761
L+ S D IR WS+ SC V
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAV 190
Score = 38 (18.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 312 GGNNLTLKGWPLTGLEPLRS-GLLQQQKP-FIQA 343
G + T+K WPL E L S G + P F+QA
Sbjct: 440 GSQDCTVKLWPLP--EALLSKGTGHEGGPVFLQA 471
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 161 (61.7 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 37/142 (26%), Positives = 63/142 (44%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T V F GKLLA+ D LW + + H ++ V P+
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYW 751
+ ++S DKT+++W+ GY ++TF GH V + PN+D L+ SC D +R W
Sbjct: 205 DHIVSASRDKTMKMWEVAT-GYCVKTFTGHREWVRMV--RPNQDGTLLASCSNDQTVRVW 261
Query: 752 SINNGSCTRVFKVESFCCWCVN 773
+ C + C++
Sbjct: 262 VVATKECKAELREHEHVVECIS 283
Score = 142 (55.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
R+ ++VI F L+ + D +W + + L+ H+ + D+ F +
Sbjct: 108 RSPVTRVI---FHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKL 164
Query: 695 LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
LA+ S D T+++WD G+ +RT GH +V S+ PN D ++ S D ++ W +
Sbjct: 165 LASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTMKMWEV 221
Query: 754 NNGSCTRVF 762
G C + F
Sbjct: 222 ATGYCVKTF 230
Score = 127 (49.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
K L H S +T V F P + ++S D T++VWD + + RT GH+ SV + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFE-RTLKGHTDSVQDISFD 159
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTR 760
L+ SC D I+ W C R
Sbjct: 160 QT-GKLLASCSADMTIKLWDFQGFECIR 186
Score = 114 (45.2 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 26/76 (34%), Positives = 35/76 (46%)
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
P L + S DKT+++WD G L T +GH V + FHP + SC D +R W
Sbjct: 309 PFLLSGSRDKTIKMWDIST-GMCLMTLVGHDNWVRGVLFHPG-GRFVVSCADDKTLRIWD 366
Query: 753 INNGSCTRVFKV-ESF 767
N C + E F
Sbjct: 367 YKNKRCMKTLSAHEHF 382
Score = 75 (31.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 34/135 (25%), Positives = 57/135 (42%)
Query: 575 QLWDDKDLELRADM---DRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEA 631
+LWD + E M D V ++ N + +S RD + +V+ G+ K
Sbjct: 175 KLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS----RDKTMKMWEVATGYCVKTF 230
Query: 632 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS 691
R V + DG LLA+ +D+ +W T + K L EH ++ + ++P
Sbjct: 231 TGHREWVRMV---RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 692 M--PRL--ATSSFDK 702
P + AT S +K
Sbjct: 288 SAHPTISEATGSENK 302
Score = 39 (18.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 189 DSLMRQNPGTANAMATRMYEEKLKLPVLRDSLDDAAMKQRFGENMGQLLDP 239
D L ++ G T + + K+ L L++A + G +GQ DP
Sbjct: 41 DELDKKFAGLLEKKWTSVIRLQKKVMELESKLNEAKEEITLGGPVGQKRDP 91
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ T V C FS DG+L+ + DK +W T + N + V F+PS
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 198
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A++ D+TV+VWD L+ + HS V + FHP+ D+ + + DG ++
Sbjct: 199 TCIASAGSDQTVKVWDV-RVNKLLQHYQVHSGGVNCISFHPS-DNYLVTASSDGTLKILD 256
Query: 753 INNG 756
+ G
Sbjct: 257 LLEG 260
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
+A T+ V FS+DG+ LAT DK +W + +L H+ + +FSP
Sbjct: 99 KAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRL 158
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
+ + S DKT+++WD N + F +DF+P+ I S D ++ W +
Sbjct: 159 IVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFVDFNPS-GTCIASAGSDQTVKVWDVR 216
Query: 755 NGSCTRVFKVESFCCWCVN 773
+ ++V S C++
Sbjct: 217 VNKLLQHYQVHSGGVNCIS 235
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
S +GK LAT D +LW+ H ++T V+FSP LA++S D+TVR+
Sbjct: 27 SPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRL 86
Query: 707 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
W D G F H+A V S+DF + + + D I+ WS+
Sbjct: 87 WIPDKRG-KFSEFKAHTAPVRSVDFSAD-GQFLATASEDKSIKVWSM 131
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 38/122 (31%), Positives = 54/122 (44%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V FS G LLA+ D+ LW D + + H++ + V FS LAT+S
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DK+++VW + L + H+ V F P+ LI SC D I+ W N C
Sbjct: 123 DKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 761 VF 762
F
Sbjct: 181 NF 182
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 154 (59.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 41/136 (30%), Positives = 73/136 (53%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE---HSSLITDVRFSPS--M 692
T V+ FS+D + + + D+ LW+T + K + E H ++ VRFSP+ +
Sbjct: 105 TKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLV 163
Query: 693 PRLATSSFDKTVRVWDADNPGYSLR-TFMGHSASVMSLDFHPNKDDLICSCDG-DGEIRY 750
P + ++S+DKTV+VW+ N LR + +GHS + ++ P D +C+ G DG I
Sbjct: 164 PTIVSASWDKTVKVWNLQN--CKLRNSLVGHSGYLNTVAVSP--DGSLCASGGKDGVILL 219
Query: 751 WSINNGSCTRVFKVES 766
W + G +++ +E+
Sbjct: 220 WDLAEGK--KLYSLEA 233
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 38/131 (29%), Positives = 58/131 (44%)
Query: 634 VRASTSKVICCHFSSDGK-LLATGGHDKKAVLWH-TDTLKS----KTNLEEHSSLITDVR 687
+RA T V D ++ T DK +LW T KS + L HS + DV
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV 70
Query: 688 FSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE 747
S + S+D +R+WD G + R F+GH+ V+S+ F + ++ S D
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAT-GETTRRFVGHTKDVLSVAFSTDNRQIV-SASRDRT 128
Query: 748 IRYWSINNGSC 758
I+ W+ G C
Sbjct: 129 IKLWN-TLGEC 138
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG+ +G D + LW T ++ H+ + V FS ++ ++S D+T+++
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 707 WDA-DNPGYSLRTFMGHSASVMSLDFHPNK-DDLICSCDGDGEIRYWSINN 755
W+ Y++ GH V + F PN I S D ++ W++ N
Sbjct: 132 WNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 156 (60.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 46/149 (30%), Positives = 68/149 (45%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 255 DTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 314
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V +SP LA+S D+ + VWD D P L GH+A
Sbjct: 315 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 374
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 652 LLATGGHDKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVW 707
L + D+K ++W T T K +++ H++ + + F+P S LAT S DKTV +W
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
D N L +F H + + + P+ + ++ S D + W ++
Sbjct: 301 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 156 (60.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 46/149 (30%), Positives = 69/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 256 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 315
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V++SP LA+S D+ + VWD D P L GH+A
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 375
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 376 KISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 652 LLATGGHDKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVW 707
L + D+K ++W T +T K +++ H++ + + F+P S LAT S DKTV +W
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
D N L +F H + + + P+ + ++ S D + W ++
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D + ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDFKLFISGACDASAKLWDV-REGTCRQTFTGHESDINAICFFPN-GEAICTGSDDASC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + + ES C
Sbjct: 251 RLFDLRADQELTAYSDESIIC 271
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D + ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDFKLFISGACDASAKLWDV-REGTCRQTFTGHESDINAICFFPN-GEAICTGSDDASC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + + ES C
Sbjct: 251 RLFDLRADQELTAYSDESIIC 271
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D + ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDFKLFISGACDASAKLWDV-REGTCRQTFTGHESDINAICFFPN-GEAICTGSDDASC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + + ES C
Sbjct: 251 RLFDLRADQELTTYSHESIIC 271
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D + ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDYKLFISGACDASAKLWDV-REGTCRQTFTGHESDINAICFFPN-GEAICTGSDDASC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + + ES C
Sbjct: 251 RLFDLRADQELTAYSQESIIC 271
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 154 (59.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ T V C FS DG+L+ + DK +W T + N + V F+PS
Sbjct: 9 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 68
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A++ D+TV+VWD L+ + HS V + FHP+ + LI + DG ++
Sbjct: 69 TCIASAGSDQTVKVWDV-RVNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILD 126
Query: 753 INNG 756
+ G
Sbjct: 127 LLEG 130
>UNIPROTKB|O43818 [details] [associations]
symbol:RRP9 "U3 small nucleolar RNA-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=TAS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003723 GO:GO:0006364 GO:GO:0030532
GO:GO:0005732 HOGENOM:HOG000188732 KO:K14793 EMBL:AJ001340
EMBL:AK313696 EMBL:BC001113 EMBL:BC009879 EMBL:BC010048
EMBL:BC023662 IPI:IPI00217862 RefSeq:NP_004695.1 UniGene:Hs.153768
ProteinModelPortal:O43818 SMR:O43818 IntAct:O43818 STRING:O43818
PhosphoSite:O43818 DOSAC-COBS-2DPAGE:O43818 SWISS-2DPAGE:O43818
PaxDb:O43818 PeptideAtlas:O43818 PRIDE:O43818 DNASU:9136
Ensembl:ENST00000232888 GeneID:9136 KEGG:hsa:9136 UCSC:uc003dbw.1
CTD:9136 GeneCards:GC03M051943 HGNC:HGNC:16829 HPA:HPA038798
neXtProt:NX_O43818 PharmGKB:PA162402176 HOVERGEN:HBG079296
InParanoid:O43818 OMA:AAKDCTI OrthoDB:EOG4XKV6X PhylomeDB:O43818
GenomeRNAi:9136 NextBio:34259 Bgee:O43818 CleanEx:HS_RRP9
Genevestigator:O43818 GermOnline:ENSG00000114767 Uniprot:O43818
Length = 475
Score = 164 (62.8 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
+S V+C SSDGK LA+G K ++W + + H ++ + F +L +
Sbjct: 199 SSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYS 258
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
+S D++V+VW+ Y + T GH +V +LD +++ + + DG +R W I S
Sbjct: 259 TSHDRSVKVWNVAENSY-VETLFGHQDAVAALDAL-SRECCVTAGGRDGTVRVWKIPEES 316
Query: 758 CTRVFKVESFCCWCVNAMNRPCLWDKLDAGDIQI 791
VF C++ +N + D G + +
Sbjct: 317 -QLVFYGHQGSIDCIHLINEEHMVSGADDGSVAL 349
Score = 37 (18.1 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 10 KMLDVYIHDYLVKRDLKASAQAF---QAEGKVSSD 41
++ +Y+ + + KA A+AF Q G++ D
Sbjct: 81 RLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKED 115
>UNIPROTKB|Q58D00 [details] [associations]
symbol:FBXW2 "F-box/WD repeat-containing protein 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00700000104359 HSSP:Q9Y297
EMBL:BT021554 EMBL:BT021797 EMBL:BC120224 IPI:IPI00690435
RefSeq:NP_001070442.1 UniGene:Bt.12194 ProteinModelPortal:Q58D00
STRING:Q58D00 PRIDE:Q58D00 Ensembl:ENSBTAT00000000956 GeneID:767863
KEGG:bta:767863 CTD:26190 HOGENOM:HOG000231971 HOVERGEN:HBG051593
InParanoid:Q58D00 KO:K10261 OMA:QTHTCAT OrthoDB:EOG4KD6M1
NextBio:20918222 Uniprot:Q58D00
Length = 454
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 140 ETSSLIGHSARVYALYYK-DG-LLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAA--VKFD 195
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD TV W+ + G + F GH+ +V S+D++ D L+ S D ++
Sbjct: 196 EQ--KLVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYNDELDILV-SGSADFTVK 251
Query: 750 YWSINNGSC 758
W+++ G+C
Sbjct: 252 VWALSAGTC 260
>UNIPROTKB|E2R6D8 [details] [associations]
symbol:FBXW2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00700000104359 CTD:26190 KO:K10261
OMA:QTHTCAT EMBL:AAEX03008163 EMBL:AAEX03008164 EMBL:AAEX03008165
EMBL:AAEX03008166 EMBL:AAEX03008167 RefSeq:XP_853711.1 SMR:E2R6D8
Ensembl:ENSCAFT00000005736 GeneID:610990 KEGG:cfa:610990
NextBio:20896534 Uniprot:E2R6D8
Length = 454
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 140 ETSSLIGHSARVYALYYK-DG-LLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAA--VKFD 195
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD TV W+ + G + F GH+ +V S+D++ D L+ S D ++
Sbjct: 196 EQ--KLVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYNDELDILV-SGSADFTVK 251
Query: 750 YWSINNGSC 758
W+++ G+C
Sbjct: 252 VWALSAGTC 260
>UNIPROTKB|Q9UKT8 [details] [associations]
symbol:FBXW2 "F-box/WD repeat-containing protein 2"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=TAS]
[GO:0006464 "cellular protein modification process" evidence=TAS]
[GO:0006508 "proteolysis" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=TAS] Reactome:REACT_17015 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0004842 CTD:26190
HOVERGEN:HBG051593 KO:K10261 OMA:QTHTCAT OrthoDB:EOG4KD6M1
EMBL:AF176698 EMBL:AF145024 EMBL:AF193594 EMBL:AK022484
EMBL:AK091860 EMBL:AL161911 EMBL:BC018738 EMBL:BC110334
EMBL:AF129531 IPI:IPI00103023 IPI:IPI00385182 RefSeq:NP_036296.2
UniGene:Hs.494985 ProteinModelPortal:Q9UKT8 SMR:Q9UKT8
IntAct:Q9UKT8 MINT:MINT-108586 STRING:Q9UKT8 PhosphoSite:Q9UKT8
DMDM:60416443 PRIDE:Q9UKT8 DNASU:26190 Ensembl:ENST00000340778
Ensembl:ENST00000373926 GeneID:26190 KEGG:hsa:26190 UCSC:uc004bkl.1
UCSC:uc010mvj.1 GeneCards:GC09M123514 HGNC:HGNC:13608 MIM:609071
neXtProt:NX_Q9UKT8 PharmGKB:PA28052 InParanoid:Q9UKT8
PhylomeDB:Q9UKT8 ChiTaRS:FBXW2 GenomeRNAi:26190 NextBio:48322
ArrayExpress:Q9UKT8 Bgee:Q9UKT8 CleanEx:HS_FBXW2
Genevestigator:Q9UKT8 GermOnline:ENSG00000119402 Uniprot:Q9UKT8
Length = 454
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 140 ETSSLIGHSARVYALYYK-DG-LLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAA--VKFD 195
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD TV W+ + G + F GH+ +V S+D++ D L+ S D ++
Sbjct: 196 EQ--KLVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYNDELDILV-SGSADFTVK 251
Query: 750 YWSINNGSC 758
W+++ G+C
Sbjct: 252 VWALSAGTC 260
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 156 (60.0 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
GF K +++ + V+ C FS DG++LA+G DK +++ T L +H+ +T
Sbjct: 226 GFELKYRSTLSGHCAPVLACAFSHDGQMLASGSVDKSVIIYDIGTQSVLHTLTQHTRYVT 285
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDAD 710
F+P+ LAT S DKTV +W D
Sbjct: 286 TCAFAPNTLLLATGSMDKTVNIWQFD 311
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLA 696
T V CC FS G +LA+ D VLW + + T LE+ S + FSP LA
Sbjct: 54 TYAVHCCSFSPSGHVLASCSTDGTTVLWSAHSGHTLTVLEQPGGSPVRVCCFSPDSTYLA 113
Query: 697 TSSFDKTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN 755
+ + D +V +W+A + Y L R +S+++ F P+ L+ G G++ W +
Sbjct: 114 SGAADGSVVLWNAHS--YKLYRCGSVKDSSLVACAFSPDGGLLVTGSSG-GDLTVWD-DR 169
Query: 756 GSCTRVFKVESFCCWCVNAMNRP 778
C K C + ++P
Sbjct: 170 MRCLHSEKAHDLGITCCSFSSQP 192
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 164 (62.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 54/186 (29%), Positives = 81/186 (43%)
Query: 575 QLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD-----TDPRDAGGRGMDVSQG--FS 627
+LWD L A + L ++G V H D T DA GR D+ G
Sbjct: 348 RLWD-----LEAQEEILHQEGH-SMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 401
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F E + ++ +FS +G +ATG D +W + + H +L+T V+
Sbjct: 402 FLEGH-----LKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVK 456
Query: 688 FSPSMPR-LATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD 745
F P L T ++D T ++W +PG+S L+T GH VM LD + LI +C D
Sbjct: 457 FEPIHGNFLLTGAYDNTAKIWT--HPGWSPLKTLAGHEGKVMGLDISSD-GQLIATCSYD 513
Query: 746 GEIRYW 751
+ W
Sbjct: 514 RTFKLW 519
Score = 38 (18.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 374 DESRRFRMLLNNRSMSLGKDGL 395
+E R R L S LGKDGL
Sbjct: 36 EEKERER-LAKGESGILGKDGL 56
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 155 (59.6 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + + +LA+G DK LW LK K + E
Sbjct: 256 DTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFES 315
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V++SP LA+S D+ + VWD D P L GH+A
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 375
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 376 KISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 652 LLATGGHDKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTVRVW 707
L + D+K ++W T +T K +++ +++ + + F+P+ LA+ S DKTV +W
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALW 301
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
D N L +F H + + + P+ + ++ S D + W ++
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 155 (59.6 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 614 DAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSK 673
D GG ++ G S E S R+ + F D LLATG ++ + +W T
Sbjct: 110 DCGGIVWGMAFGSSVPEKQS-RSINIEWHHFQFGRDQLLLATGLNNGRIKIWDVYTGTLL 168
Query: 674 TNLEEHSSLITDVRFSPSMP-RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
NL +H+ ++ D+ F+P L ++S DK +RVWD + G ++ GH V S F
Sbjct: 169 LNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLWGHPNRVYSSAFS 228
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSCTR 760
P+ ++CS + W+++ + R
Sbjct: 229 PDSS-VLCSVGASKAVLLWNMDKYTLIR 255
Score = 120 (47.3 bits), Expect = 0.00058, P = 0.00058
Identities = 42/145 (28%), Positives = 60/145 (41%)
Query: 639 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS 698
++V FS D +L + G K +LW+ D LE H + + FSP LAT+
Sbjct: 220 NRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGHHNDVVSCEFSPDGALLATA 279
Query: 699 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDL----ICSC-DG--------D 745
S+D V VWD L +GH S F +D + C DG D
Sbjct: 280 SYDTRVIVWDHQRGSILLE--LGHLFPPPSPIFAGGANDRWVRSVSFCADGRHIASVSDD 337
Query: 746 GEIRYWSINNGSCTRVFKVES-FCC 769
+R+WSI + V + + CC
Sbjct: 338 RLVRFWSIEERAPQAVASLPNGLCC 362
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 153 (58.9 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D + ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDFNLFISGACDASAKLWDV-REGTCRQTFTGHESDINAICFFPN-GEAICTGSDDASC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + F ES C
Sbjct: 251 RLFDLRADQELICFSHESIIC 271
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 153 (58.9 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D + ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDYKLFISGACDASAKLWDV-REGTCRQTFTGHESDINAICFFPN-GEAICTGSDDASC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + + ES C
Sbjct: 251 RLFDLRADQELTAYSHESIIC 271
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 152 (58.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 43/150 (28%), Positives = 69/150 (46%)
Query: 651 KLLATGGHDKKAVLWHTDTLK-------SKTNLEEHSSLITDVRFSPSMPRLATSSFDKT 703
K + + DKK ++W+ +T +K +L HS I DV S + S+D +
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
VR+WD + G ++R+F+GH++ V S+ F P+ ++ S D I+ W+ C
Sbjct: 96 VRLWDL-SLGETIRSFIGHTSDVFSVSFSPDNRQIV-SASRDKTIKLWN-TLAQCKYTIT 152
Query: 764 VESFCCW--CVNAMNRP-------CLWDKL 784
+ W CV P C WDKL
Sbjct: 153 DQQHTDWITCVRFSPSPNQAIIVSCGWDKL 182
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 614 DAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKS 672
D R D+S G + + S TS V FS D + + + DK LW+T K
Sbjct: 93 DHSVRLWDLSLGETIR---SFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKY 149
Query: 673 KTNLEEHSSLITDVRFSPSMPR--LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLD 730
++H+ IT VRFSPS + + + +DK V+VW+ N + + GH+ + ++
Sbjct: 150 TITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN-KNLEGHTGVLNTVT 208
Query: 731 FHPNKDDLICSCDG-DGEIRYWSINNG 756
P D +C+ G DG + W + G
Sbjct: 209 ISP--DGSLCASGGKDGVAKLWDVKEG 233
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG +G D LW ++ + H+S + V FSP ++ ++S DKT+++
Sbjct: 81 SSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKL 140
Query: 707 WDA-DNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y++ T H+ + + F P+ + +I SC D ++ W++ N
Sbjct: 141 WNTLAQCKYTI-TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKN 190
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 152 (58.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 43/150 (28%), Positives = 69/150 (46%)
Query: 651 KLLATGGHDKKAVLWHTDTLK-------SKTNLEEHSSLITDVRFSPSMPRLATSSFDKT 703
K + + DKK ++W+ +T +K +L HS I DV S + S+D +
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 704 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 763
VR+WD + G ++R+F+GH++ V S+ F P+ ++ S D I+ W+ C
Sbjct: 96 VRLWDL-SLGETIRSFIGHTSDVFSVSFSPDNRQIV-SASRDKTIKLWN-TLAQCKYTIT 152
Query: 764 VESFCCW--CVNAMNRP-------CLWDKL 784
+ W CV P C WDKL
Sbjct: 153 DQQHTDWITCVRFSPSPNQAIIVSCGWDKL 182
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 614 DAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKS 672
D R D+S G + + S TS V FS D + + + DK LW+T K
Sbjct: 93 DHSVRLWDLSLGETIR---SFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKY 149
Query: 673 KTNLEEHSSLITDVRFSPSMPR--LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLD 730
++H+ IT VRFSPS + + + +DK V+VW+ N + + GH+ + ++
Sbjct: 150 TITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN-KNLEGHTGVLNTVT 208
Query: 731 FHPNKDDLICSCDG-DGEIRYWSINNG 756
P D +C+ G DG + W + G
Sbjct: 209 ISP--DGSLCASGGKDGVAKLWDVKEG 233
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 647 SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 706
SSDG +G D LW ++ + H+S + V FSP ++ ++S DKT+++
Sbjct: 81 SSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKL 140
Query: 707 WDA-DNPGYSLRTFMGHSASVMSLDFHPNKDD-LICSCDGDGEIRYWSINN 755
W+ Y++ T H+ + + F P+ + +I SC D ++ W++ N
Sbjct: 141 WNTLAQCKYTI-TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKN 190
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 157 (60.3 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 42/133 (31%), Positives = 61/133 (45%)
Query: 641 VICC-HFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSS------LITDVRFSPSMP 693
V+CC FS++GK LATG + + A ++ T K L E S + + FSP
Sbjct: 315 VVCCVKFSNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGK 373
Query: 694 RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
L T + D+ +++WD F GH + SLDF N I S GD R W +
Sbjct: 374 YLVTGTEDRQIKLWDLSTQKVRY-VFSGHEQDIYSLDFSHN-GRFIVSGSGDRTARLWDV 431
Query: 754 NNGSCTRVFKVES 766
G C ++E+
Sbjct: 432 ETGQCILKLEIEN 444
Score = 134 (52.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS +G+ + +G D+ A LW +T + LE + +T + SP+ +A S D+ +R
Sbjct: 410 FSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIR 468
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
VW G + GH SV S+ F P+ L+ S D I+ W +
Sbjct: 469 VWSVS--GTLVERLEGHKESVYSIAFSPDSSILL-SGSLDKTIKVWEL 513
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DGK L TG D++ LW T K + H I + FS + + + S D+T R
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
+WD + L+ + + + +++ PN D I D IR WS++
Sbjct: 428 LWDVETGQCILKLEIENGVTAIAIS--PN-DQFIAVGSLDQIIRVWSVS 473
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 161 (61.7 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 613 RDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS 672
RDA R D+ QG + + + V C + DGKL+ +G +D +WH + +
Sbjct: 1093 RDATLRVWDIEQGSCL---HVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQEC 1147
Query: 673 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 732
L+ H++ + ++F + + S D ++RVWD + G T MGH + ++
Sbjct: 1148 LHTLQGHTNRVYSLQFDGL--HVVSGSLDTSIRVWDVET-GNCKHTLMGHQSLTSGMELR 1204
Query: 733 PNKDDLICSCDGDGEIRYWSINNGSC 758
N ++ S + D ++ W I G C
Sbjct: 1205 QN---ILVSGNADSTVKVWDITTGQC 1227
Score = 141 (54.7 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
+ C FS G + +G D +W K L H+ + + S ++ + + S
Sbjct: 998 ITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNI--IISGST 1053
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
D+T++VWD D+ G + T GH+++V + H +K + S D +R W I GSC
Sbjct: 1054 DRTLKVWDMDS-GACVHTLQGHTSTVRCMHLHGSK---VVSGSRDATLRVWDIEQGSCLH 1109
Query: 761 V 761
V
Sbjct: 1110 V 1110
Score = 43 (20.2 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 583 ELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVI 642
+L + + + GS N + DD P + GR + +++K+ ++ S+ K
Sbjct: 387 KLNLSLIKSMAGGSKAANGSGTANSDDW-PSSSNGRTVSSDSKYTYKDLSTTPTSSRKYT 445
Query: 643 CCHFS-SDGKL 652
S S KL
Sbjct: 446 NSRLSKSTAKL 456
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/134 (30%), Positives = 61/134 (45%)
Query: 648 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 707
SD + TGG DK +++ + + L+ HS +T V F PS + ++S D T+R+W
Sbjct: 48 SDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIW 107
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF-KV-- 764
N ++ H SV L H D L+ S D +YW+ ++ RV KV
Sbjct: 108 SVPNAS-CVQVVRAHEGSVTGLSLHATGDYLLSSSDD----QYWAFSDIQTGRVLTKVTD 162
Query: 765 ESFCCWCVNAMNRP 778
ES C A P
Sbjct: 163 ESSGCALTCAQFHP 176
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/145 (28%), Positives = 68/145 (46%)
Query: 628 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
F +S+ T +V + S G LLAT DK +W + L +S D++
Sbjct: 105 FTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIK 164
Query: 688 ---FSPSMPRLATSSFDKTVRVW-DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD 743
+ P+ LA+SS+D T++ W D D + T GH +S+ L F+ + D L+ SC
Sbjct: 165 CVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDKLV-SCG 223
Query: 744 GDGEIRYWSIN--NGSCTRVFKVES 766
D + +W + N +FK ++
Sbjct: 224 EDKLVLFWKFDKENEKWINIFKFKN 248
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
GF K +++ + V+ C FS +G++L +G DK +++ T+T L +H+ +T
Sbjct: 226 GFELKYKSTLSGHCAPVLACAFSHNGQMLVSGSVDKSVIVYDTNTETILHTLTQHTRYVT 285
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDAD 710
F+P++ LAT S DKTV +W D
Sbjct: 286 SCAFAPNILLLATGSMDKTVNIWQFD 311
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 41/145 (28%), Positives = 66/145 (45%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLA 696
T V CC FS G +LA+ D VLW+T ++ +E+ + S + +FSP L
Sbjct: 54 TYAVHCCCFSPSGHVLASCSTDGTTVLWNTQNGETLAVMEQPTGSPVRVCQFSPDSTCLV 113
Query: 697 TSSFDKTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLIC--SCDGDGEIRYWSI 753
+ + D TV +W+A + Y L R S+++ F PN + + SC G+I W
Sbjct: 114 SGAADGTVVLWNAQS--YKLYRCGSVKDGSLVACAFSPNGNFFVTGSSC---GDITVWD- 167
Query: 754 NNGSCTRVFKVESFCCWCVNAMNRP 778
+ C K C + ++P
Sbjct: 168 DKMRCLHSEKAHDLGITCCDFSSQP 192
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
+S ++C SSDGK LA+G K ++W + + H ++ + F +L +
Sbjct: 202 SSHILCMAISSDGKYLASGDRSKLILIWEAQSCRHLYTFTGHRDAVSGLAFRRGTHQLYS 261
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+S D++V+VW+ Y + T GH +V +LD +++ + + DG +R W I
Sbjct: 262 TSHDRSVKVWNVAENSY-VETLFGHQDAVAALDAL-SRECCVTAGGRDGTVRVWKI 315
>MGI|MGI:1353435 [details] [associations]
symbol:Fbxw2 "F-box and WD-40 domain protein 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1353435 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 HOVERGEN:HBG051593 OrthoDB:EOG4KD6M1 ChiTaRS:FBXW2
EMBL:X54352 EMBL:AL929106 IPI:IPI00620767 PIR:A56640
UniGene:Mm.4465 ProteinModelPortal:Q60584 SMR:Q60584 STRING:Q60584
PhosphoSite:Q60584 PRIDE:Q60584 InParanoid:Q60584 CleanEx:MM_FBXW2
Genevestigator:Q60584 GermOnline:ENSMUSG00000035949 Uniprot:Q60584
Length = 422
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 140 ETSSLIGHSARVYALYYK-DG-LLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAA--VKFD 195
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD TV W+ + G + F GH+ +V S+D+ D L+ S D ++
Sbjct: 196 EQ--KLVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYSDELDILV-SGSADFAVK 251
Query: 750 YWSINNGSC 758
W+++ G+C
Sbjct: 252 VWALSAGTC 260
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 688
K + + A T + CC F D ++ + G D LW +T + KT H+ +
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCALWDIETGQQKTVFVGHTGDCMSLAV 192
Query: 689 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 748
SP + + D + ++WD G +TF GH + + ++ F PN + IC+ D
Sbjct: 193 SPDFRLFISGACDASAKLWDV-REGTCRQTFTGHESDINAICFFPN-GEAICTGSDDASC 250
Query: 749 RYWSINNGSCTRVFKVESFCC 769
R + + + ES C
Sbjct: 251 RLFDLRADQELTTYAHESIIC 271
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K +++V A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 260 DTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 319
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDADNPGYSLRT-----------FM--GHSA 724
H I V++SP LA+S D+ + VWD G T F+ GH+A
Sbjct: 320 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 379
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 380 KISDFSWNPNEPWIICSVSEDNIMQVWQM 408
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 652 LLATGGHDKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVW 707
L + D+K ++W T +T K ++ H++ + + F+P S LAT S DKTV +W
Sbjct: 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
D N L +F H + + + P+ + ++ S D + W ++
Sbjct: 306 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 156 (60.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 46/149 (30%), Positives = 69/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 256 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 315
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V++SP LA+S D+ + VWD D P L GH+A
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 375
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 376 KISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 133 (51.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 652 LLATGGHDKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVW 707
L + D+K ++W T +T K +++ H++ + + F+P S LAT S DKTV +W
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
D N L +F H + + + P+ + ++ S D + W ++
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 280 STPDIKSEINPVLNPRAAGPEGSLMGIPGS-NQGGNNLT 317
S PD E NP L R EG G+ + N GN L+
Sbjct: 159 SKPDPSGECNPNLRLRGHQKEG--YGLSWNPNLSGNLLS 195
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 156 (60.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 46/149 (30%), Positives = 69/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 256 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 315
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V++SP LA+S D+ + VWD D P L GH+A
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 375
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 376 KISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 133 (51.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 652 LLATGGHDKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVW 707
L + D+K ++W T +T K +++ H++ + + F+P S LAT S DKTV +W
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
D N L +F H + + + P+ + ++ S D + W ++
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 280 STPDIKSEINPVLNPRAAGPEGSLMGIPGS-NQGGNNLT 317
S PD E NP L R EG G+ + N GN L+
Sbjct: 159 SKPDPSGECNPDLRLRGHQKEG--YGLSWNPNLSGNLLS 195
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 156 (60.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 46/149 (30%), Positives = 69/149 (46%)
Query: 621 DVSQGFSFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTN-LEE 678
D + K ++SV A T++V C F+ + +LATG DK LW LK K + E
Sbjct: 256 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 315
Query: 679 HSSLITDVRFSPSMPR-LATSSFDKTVRVWDA-------------DNPGYSLRTFMGHSA 724
H I V++SP LA+S D+ + VWD D P L GH+A
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 375
Query: 725 SVMSLDFHPNKDDLICSCDGDGEIRYWSI 753
+ ++PN+ +ICS D ++ W +
Sbjct: 376 KISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 133 (51.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 652 LLATGGHDKKAVLWHT---DTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVW 707
L + D+K ++W T +T K +++ H++ + + F+P S LAT S DKTV +W
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 708 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
D N L +F H + + + P+ + ++ S D + W ++
Sbjct: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 280 STPDIKSEINPVLNPRAAGPEGSLMGIPGS-NQGGNNLT 317
S PD E NP L R EG G+ + N GN L+
Sbjct: 159 SKPDPSGECNPDLRLRGHQKEG--YGLSWNPNLSGNLLS 195
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
S+ T V C FS DG+L+ + DK +W T + N + V F+PS
Sbjct: 97 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG 156
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
+A++ D+TV+VWD L+ + HS V + FHP+ + LI + DG ++
Sbjct: 157 TCIASAGSDQTVKVWDV-RVNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILD 214
Query: 753 INNG 756
+ G
Sbjct: 215 LLEG 218
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 635 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR 694
+A T+ V FS+DG+ LAT DK +W + +L H+ + +FSP
Sbjct: 57 KAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRL 116
Query: 695 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 754
+ + S DKT+++WD N + F +DF+P+ I S D ++ W +
Sbjct: 117 IVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFVDFNPS-GTCIASAGSDQTVKVWDVR 174
Query: 755 NGSCTRVFKVESFCCWCVN 773
+ ++V S C++
Sbjct: 175 VNKLLQHYQVHSGGVNCIS 193
Score = 146 (56.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 38/122 (31%), Positives = 54/122 (44%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V FS G LLA+ D+ LW D + + H++ + V FS LAT+S
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DK+++VW + L + H+ V F P+ LI SC D I+ W N C
Sbjct: 81 DKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQCVN 138
Query: 761 VF 762
F
Sbjct: 139 NF 140
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 679 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDL 738
H ++T V+FSP LA++S D+TVR+W D G F H+A V S+DF +
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG-KFSEFKAHTAPVRSVDFSAD-GQF 74
Query: 739 ICSCDGDGEIRYWSI 753
+ + D I+ WS+
Sbjct: 75 LATASEDKSIKVWSM 89
>UNIPROTKB|C9J8B4 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end-processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AC006011
HGNC:HGNC:25651 HOGENOM:HOG000126810 ChiTaRS:WDR33 IPI:IPI00917459
ProteinModelPortal:C9J8B4 SMR:C9J8B4 Ensembl:ENST00000436787
ArrayExpress:C9J8B4 Bgee:C9J8B4 Uniprot:C9J8B4
Length = 205
Score = 142 (55.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/133 (28%), Positives = 58/133 (43%)
Query: 625 GFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT 684
G +F ++A S V +S + + T H W ++ K + H I
Sbjct: 70 GLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKM-FQAHKEAIR 128
Query: 685 DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLIC-SCD 743
+ FSP+ + AT S D TVR+WD + R GH A V +D+HP K ++ S D
Sbjct: 129 EASFSPTDNKFATCSDDGTVRIWDFLRC-HEERILRGHGADVKCVDWHPTKGLVVSGSKD 187
Query: 744 GDGEIRYWSINNG 756
I++W G
Sbjct: 188 SQQPIKFWDPKTG 200
Score = 132 (51.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 634 VRASTSKVICCHF----SSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
VR ST+KV C F + +G+ L TG + LW+ T +T L+ H S + + +S
Sbjct: 33 VRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWS 92
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+ + T+ V+ W ++ +++ F H ++ F P D+ +C DG +R
Sbjct: 93 HNDMWMLTADHGGYVKYWQSNMN--NVKMFQAHKEAIREASFSPT-DNKFATCSDDGTVR 149
Query: 750 YW 751
W
Sbjct: 150 IW 151
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 159 (61.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/118 (30%), Positives = 57/118 (48%)
Query: 653 LATGGHDKKAVLWHT-DTLK-SKTNLEEHSSLITDVRFSPSMPRLATSSFDK-TVRVWDA 709
+ TG D +W D+ SK S I DV+F+PS ++FD T+++WD
Sbjct: 132 ILTGSQDNTLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDI 191
Query: 710 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG-SCTRVFKVES 766
P ++ H V+++D+HP + ++I S D IR W +NG S V + S
Sbjct: 192 RKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGKSLNNVSTISS 249
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/145 (32%), Positives = 71/145 (48%)
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN-LEEHSSLITDVRFSP-------SM 692
V+C +S DG+++ATG D LW + + + L HS IT + + P S
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSK 248
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
PRLA+SS D T+++WD + T GH+ SV + + L+ S D +R W
Sbjct: 249 PRLASSSKDGTIKIWDTVSRVCQY-TMSGHTNSVSCVKW--GGQGLLYSGSHDRTVRVWD 305
Query: 753 INN-GSCTRVFKVESFCCWCVNAMN 776
IN+ G C + K S W VN ++
Sbjct: 306 INSQGRCINILK--SHAHW-VNHLS 327
Score = 141 (54.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 629 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVR 687
+EA + IC + +++ T D LW+ + K + H L+ V
Sbjct: 350 EEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVA 409
Query: 688 FSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE 747
FSP + ++SFD ++++WD + G + TF GH ASV + + + L+ SC D
Sbjct: 410 FSPDGRYIVSASFDNSIKLWDGRD-GKFISTFRGHVASVYQVAWSSDCR-LLVSCSKDTT 467
Query: 748 IRYWSI 753
++ W +
Sbjct: 468 LKVWDV 473
Score = 139 (54.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 38/138 (27%), Positives = 62/138 (44%)
Query: 629 KEANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR 687
+ ++++ S ++C F+ + TG D A +W DT L+ H + + V
Sbjct: 134 RSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 688 FSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM-GHSASVMSLDF---H---PNKDDLIC 740
+SP +AT S D T+R+WD + G L + GHS + SL + H P +
Sbjct: 194 WSPDGEVIATGSMDNTIRLWDPKS-GQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLA 252
Query: 741 SCDGDGEIRYWSINNGSC 758
S DG I+ W + C
Sbjct: 253 SSSKDGTIKIWDTVSRVC 270
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 475 PAGSVTLDGSMSNSFR 490
P G V GSM N+ R
Sbjct: 196 PDGEVIATGSMDNTIR 211
>RGD|1310460 [details] [associations]
symbol:Fbxw2 "F-box and WD repeat domain containing 2"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:1310460
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00700000104359 CTD:26190
HOGENOM:HOG000231971 HOVERGEN:HBG051593 KO:K10261 OMA:QTHTCAT
OrthoDB:EOG4KD6M1 EMBL:CH474001 EMBL:BC166990 IPI:IPI00568489
RefSeq:NP_001101305.1 UniGene:Rn.103250 ProteinModelPortal:B2RZ17
STRING:B2RZ17 Ensembl:ENSRNOT00000025399 GeneID:311881
KEGG:rno:311881 UCSC:RGD:1310460 NextBio:664403 ArrayExpress:B2RZ17
Genevestigator:B2RZ17 Uniprot:B2RZ17
Length = 454
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 630 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS 689
E +S+ +++V ++ DG LL TG D A LW T + ++ H+ V+F
Sbjct: 140 ETSSLIGHSARVYALYYK-DG-LLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAA--VKFD 195
Query: 690 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 749
+L T SFD TV W+ + G + F GH+ +V S+D+ D L+ S D ++
Sbjct: 196 EQ--KLVTGSFDNTVACWEWSS-GARTQHFRGHTGAVFSVDYSDELDILV-SGSADFAVK 251
Query: 750 YWSINNGSC 758
W+++ G+C
Sbjct: 252 VWALSAGTC 260
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 652 LLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTVRVWDAD 710
+LATG +D + +W T NL H ++ D+ F+PS L ++S DKT+R+WD +
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 711 NPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVE 765
G ++ GH V P+ ++CS G+ + WS+ S T + K+E
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMR--SYTLIRKLE 236
WARNING: HSPs involving 609 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 847 679 0.00079 121 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 859
No. of states in DFA: 627 (67 KB)
Total size of DFA: 375 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.14u 0.12s 56.26t Elapsed: 00:00:03
Total cpu time: 56.21u 0.12s 56.33t Elapsed: 00:00:03
Start: Fri May 10 20:04:33 2013 End: Fri May 10 20:04:36 2013
WARNINGS ISSUED: 2