BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003106
(847 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FUY2|LEUNG_ARATH Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG
PE=1 SV=2
Length = 931
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/603 (73%), Positives = 510/603 (84%), Gaps = 21/603 (3%)
Query: 171 RRDGAHLLNGNTNGLLGNDS--LMRQNPGTANAMATRMYEEKLKLPVLRDSLDDAAMKQR 228
RRDG+HL NG+ NGL+GN+S +MRQNPG+ +++A++ YEE++K+P R+SLD+AAMK R
Sbjct: 185 RRDGSHLANGSANGLVGNNSEPVMRQNPGSGSSLASKAYEERVKMPTQRESLDEAAMK-R 243
Query: 229 FGENMGQLLDPNHASYIKSAAATGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPDIKSEI 288
FG+N+GQLLDP+HAS +KSAAA+GQP+GQVLH T+GGMSPQVQ R+QQLPGS DIKSEI
Sbjct: 244 FGDNVGQLLDPSHASILKSAAASGQPAGQVLHSTSGGMSPQVQTRNQQLPGSAVDIKSEI 303
Query: 289 NPVLNPRAAGPEGSLMGIPGSNQGGNNLTLKGWPLTGLEPLRSGLLQQQKPFIQAPQPFH 348
NPVL PR A PEGSL+GIPGSNQG NNLTLKGWPLTG + LRSGLLQQQKPF+Q+ Q FH
Sbjct: 304 NPVLTPRTAVPEGSLIGIPGSNQGSNNLTLKGWPLTGFDQLRSGLLQQQKPFMQS-QSFH 362
Query: 349 QIQMLTPQH-QQLLLAQQNLTSPSASDESRRFRMLLNNRSMSLGKDGLSNSVGDVVSNVG 407
Q+ MLTPQH QQL+LAQQNL S S S+E+RR +MLLNNRSM+LGKDGL +SVGDV+ NVG
Sbjct: 363 QLNMLTPQHQQQLMLAQQNLNSQSVSEENRRLKMLLNNRSMTLGKDGLGSSVGDVLPNVG 422
Query: 408 SPLPAGGHLLPRGDTDMLIKLKMAQMHQQQQQQQQQQQQNSNPQQH-------TLSNQQS 460
S L GG LLPRGDTDML+KLKMA + QQQQ QQQ PQ L+N Q
Sbjct: 423 SSLQPGGSLLPRGDTDMLLKLKMALLQQQQQNQQQGGGNPPQPQPQPQPLNQLALTNPQP 482
Query: 461 QSSNHNLHQQDKMGPAGSVTLDGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANSSGTA 520
QSSNH++HQQ+K+G GS+T+DGS+SNSFRGN+QV KNQ+GRKRKQPVSSSGPANSSGTA
Sbjct: 483 QSSNHSIHQQEKLGGGGSITMDGSISNSFRGNEQVLKNQSGRKRKQPVSSSGPANSSGTA 542
Query: 521 NTAGPSPSSAPSTPSTHTPGDVISMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDK 580
NTAGPSPSSAPSTPSTHTPGDVISMP LPHSG +SK +MMFGT+G GTLTSPSNQL
Sbjct: 543 NTAGPSPSSAPSTPSTHTPGDVISMPNLPHSGGSSKSMMMFGTEGTGTLTSPSNQL---- 598
Query: 581 DLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSK 640
ADMDR VEDGSLDDNVESFLS +D D RDA R MDVS+GF+F E NSVRAST+K
Sbjct: 599 -----ADMDRFVEDGSLDDNVESFLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTK 653
Query: 641 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 700
V CCHFSSDGK+LA+ GHDKKAVLW+TDT+K KT LEEH+++ITD+RFSPS RLATSSF
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSF 713
Query: 701 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 760
DKTVRVWDADN GYSLRTFMGHS+ V SLDFHP KDDLICSCD D EIRYWSINNGSCTR
Sbjct: 714 DKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTR 773
Query: 761 VFK 763
V+K
Sbjct: 774 VYK 776
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 628 FKEANSVRASTSK----VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLI 683
F EAN + +K V+ FS DGKL ATG W T K + H+S +
Sbjct: 850 FTEANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWV 909
Query: 684 TDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD 743
V FS LA+ S D+TVR+WD + G L+TF GH++ V S+ F PN ++ S
Sbjct: 910 NSVGFSQDGKMLASGSDDQTVRLWDI-SSGQCLKTFKGHTSRVRSVVFSPNS-LMLASGS 967
Query: 744 GDGEIRYWSINNGSCTRVFK 763
D +R W I++G C +F+
Sbjct: 968 SDQTVRLWDISSGECLYIFQ 987
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 614 DAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSK 673
D R D+S S K ++ + T+ V F+ DG +LA+G D+ LW + K
Sbjct: 1263 DKTVRLWDIS---SSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCL 1319
Query: 674 TNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHP 733
+ H+S ++ V FSP LA+ S D+TVR+W + G L TF+GH+ V S+ F P
Sbjct: 1320 HTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSI-SSGECLYTFLGHTNWVGSVIFSP 1378
Query: 734 NKDDLICSCDGDGEIRYWSINNGSC 758
+ ++ S GD +R WSI++G C
Sbjct: 1379 DG-AILASGSGDQTVRLWSISSGKC 1402
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 614 DAGG--RGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK 671
D+GG R + + G KE + + S V FS DGK+LA+G D+ LW + +
Sbjct: 883 DSGGIVRFWEAATG---KELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQ 939
Query: 672 SKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF 731
+ H+S + V FSP+ LA+ S D+TVR+WD + G L F GH+ V S+ F
Sbjct: 940 CLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDI-SSGECLYIFQGHTGWVYSVAF 998
Query: 732 HPNKDDLICSCDGDGEIRYWSINNGSCTRVFKVESFCC 769
+ + ++ + GD +R W I++ C +F+ + C
Sbjct: 999 NLDG-SMLATGSGDQTVRLWDISSSQCFYIFQGHTSCV 1035
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
TS V F+ DG LA+G D+ LW ++ K + H+S + V F+P LA+
Sbjct: 1200 TSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLAS 1259
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
S DKTVR+WD + L TF GH+ V S+ F+P+ ++ S GD +R W I++
Sbjct: 1260 GSSDKTVRLWDISSSK-CLHTFQGHTNWVNSVAFNPDG-SMLASGSGDQTVRLWEISSSK 1317
Query: 758 CTRVFK 763
C F+
Sbjct: 1318 CLHTFQ 1323
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
TS V F+ DG +LA+G DK LW + K + H++ + V F+P LA+
Sbjct: 1242 TSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLAS 1301
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
S D+TVR+W+ + L TF GH++ V S+ F P+ L D D +R WSI++G
Sbjct: 1302 GSGDQTVRLWEISSSK-CLHTFQGHTSWVSSVTFSPDGTMLASGSD-DQTVRLWSISSGE 1359
Query: 758 CTRVF 762
C F
Sbjct: 1360 CLYTF 1364
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 633 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM 692
+++ T+ V FS DG LA+G D+ LW + K L+ H+S + V F+P
Sbjct: 1153 TLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDG 1212
Query: 693 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 752
LA+ S D+TVR+W+ N L TF GH++ V S+ F+P+ ++ S D +R W
Sbjct: 1213 STLASGSSDQTVRLWEI-NSSKCLCTFQGHTSWVNSVVFNPDG-SMLASGSSDKTVRLWD 1270
Query: 753 INNGSCTRVFK 763
I++ C F+
Sbjct: 1271 ISSSKCLHTFQ 1281
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 646 FSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 705
FS DG +LA+G D+ LW + K L+ H++ + + FSP LA+ S D+TVR
Sbjct: 1376 FSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVR 1435
Query: 706 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE-IRYWSINNGSCTRVFKV 764
+W+ + G L T GH SV S+ F + D LI + D E I+ W + G C + K
Sbjct: 1436 LWNI-SSGECLYTLHGHINSVRSVAF--SSDGLILASGSDDETIKLWDVKTGECIKTLKS 1492
Query: 765 E 765
E
Sbjct: 1493 E 1493
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
T V F+ DG +LATG D+ LW + + + H+S + V FS LA+
Sbjct: 990 TGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLAS 1049
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI-RYWSINNG 756
S D+TVR+WD + G L T GH++ V S+ F P D + + GD +I R W I++G
Sbjct: 1050 GSDDQTVRLWDI-SSGNCLYTLQGHTSCVRSVVFSP--DGAMLASGGDDQIVRLWDISSG 1106
Query: 757 SCTRVFKVESFCCWC 771
+C ++ ++ + W
Sbjct: 1107 NC--LYTLQGYTSWV 1119
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 618 RGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE 677
R D+S G +++ TS V FS +G LA G D+ LW + K L+
Sbjct: 1099 RLWDISSGNCLY---TLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQ 1155
Query: 678 EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 737
H++ + V FSP LA+ S D+TVR+WD + L GH++ V S+ F+P+
Sbjct: 1156 GHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSK-CLYILQGHTSWVNSVVFNPDGST 1214
Query: 738 LICSCDGDGEIRYWSINNGSCTRVFK 763
L S D +R W IN+ C F+
Sbjct: 1215 L-ASGSSDQTVRLWEINSSKCLCTFQ 1239
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 618 RGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE 677
R D+S G +++ TS V FS DG +LA+GG D+ LW + L+
Sbjct: 1057 RLWDISSGNCLY---TLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQ 1113
Query: 678 EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 737
++S + + FSP+ LA S D+ VR+WD + L T GH+ V ++ F P+
Sbjct: 1114 GYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKK-CLYTLQGHTNWVNAVAFSPDGAT 1172
Query: 738 LICSCDGDGEIRYWSINNGSCTRVFK 763
L S GD +R W I++ C + +
Sbjct: 1173 L-ASGSGDQTVRLWDISSSKCLYILQ 1197
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 638 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 697
TS V FSSDG +LA+G D+ LW + L+ H+S + V FSP LA+
Sbjct: 1032 TSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLAS 1091
Query: 698 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 757
D+ VR+WD + G L T G+++ V L F PN L + D +R W I++
Sbjct: 1092 GGDDQIVRLWDI-SSGNCLYTLQGYTSWVRFLVFSPNGVTL-ANGSSDQIVRLWDISSKK 1149
Query: 758 CTRVFKVESFCCWCVNAM 775
C ++ ++ W VNA+
Sbjct: 1150 C--LYTLQGHTNW-VNAV 1164
>sp|Q59QW5|FLO8_CANAL Transcriptional regulator of filamentous growth FLO8 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=FLO8 PE=1
SV=1
Length = 817
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 KMLDVYIHDYLVKRDLKASAQAFQAEG-KVSSDPVAIDAPGGFLFEWWSVFWDIFIAR 66
++L+ I D+LVK + +A+AF E + S P +D GFL EWW VF+D+F R
Sbjct: 33 QVLNSLILDFLVKHQFQDTAKAFSKESPNLPSIPPLMDCSQGFLLEWWQVFFDLFQVR 90
>sp|Q54FZ8|Y8923_DICDI Putative uncharacterized transmembrane protein DDB_G0290641
OS=Dictyostelium discoideum GN=DDB_G0290641 PE=4 SV=2
Length = 5801
Score = 36.2 bits (82), Expect = 1.2, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 115 QQQQQQQQQQLQMQQILLQRHAQQQQQHQQQHQQQQQQQQQPPQQPQQQQPQQQQQ 170
+++ + L+ QI H + ++Q ++ QQ+ QQ + PQQP++ Q Q +
Sbjct: 5580 EKENKNGFSHLESLQITPIPHDKDEEQPEKPQQQEIHQQPEKPQQPEKPQELQSTE 5635
Score = 35.4 bits (80), Expect = 2.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 69 EKHSEVAASYIETQLIKAREQQQQQQQQQQQQQQQQQQSQQPPHQQQQQQQQQQQQLQMQ 128
EK ++ S++E+ I + ++Q ++ QQQ+ Q + P Q ++ Q+ Q + Q
Sbjct: 5580 EKENKNGFSHLESLQITPIPHDKDEEQPEKPQQQEIHQQPEKPQQPEKPQELQSTETPGQ 5639
Query: 129 QI 130
++
Sbjct: 5640 EV 5641
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 328,247,083
Number of Sequences: 539616
Number of extensions: 15097309
Number of successful extensions: 440969
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3420
Number of HSP's successfully gapped in prelim test: 1677
Number of HSP's that attempted gapping in prelim test: 106364
Number of HSP's gapped (non-prelim): 116282
length of query: 847
length of database: 191,569,459
effective HSP length: 126
effective length of query: 721
effective length of database: 123,577,843
effective search space: 89099624803
effective search space used: 89099624803
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)