Your job contains 1 sequence.
>003109
MLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLP
LPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLA
AHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQE
TRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSPVVQTFFPMQSTSET
VKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDH
SPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSL
YVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWR
TWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIY
DEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKV
CDVISEHQAHEYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVD
RGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTS
SNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGH
SPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQSGLAKEQVHGLSSQFKQRGK
SCTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWE
NLDFGPK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003109
(847 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2037355 - symbol:SPL14 "squamosa promoter bind... 2232 2.2e-231 1
TAIR|locus:2011706 - symbol:AT1G76580 species:3702 "Arabi... 2017 1.4e-208 1
TAIR|locus:2101402 - symbol:SPL12 "squamosa promoter-bind... 742 3.1e-79 3
TAIR|locus:2041329 - symbol:SPL1 "squamosa promoter bindi... 764 1.4e-78 2
>TAIR|locus:2037355 [details] [associations]
symbol:SPL14 "squamosa promoter binding protein-like 14"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA;TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042742 "defense response to bacterium"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110 PROSITE:PS50088
PROSITE:PS51141 SMART:SM00248 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0042742
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003700 GO:GO:0006351 EMBL:AC007369
Gene3D:4.10.1100.10 SUPFAM:SSF103612 eggNOG:NOG266915
HOGENOM:HOG000082688 EMBL:AJ242957 EMBL:AJ243094 EMBL:AY074499
IPI:IPI00520597 PIR:G86342 PIR:T52569 RefSeq:NP_173522.1
UniGene:At.21192 ProteinModelPortal:Q8RY95 SMR:Q8RY95
EnsemblPlants:AT1G20980.1 GeneID:838692 KEGG:ath:AT1G20980
GeneFarm:4776 TAIR:At1g20980 InParanoid:Q8RY95 OMA:VERDYCA
PhylomeDB:Q8RY95 ProtClustDB:CLSN2679456 Genevestigator:Q8RY95
GermOnline:AT1G20980 Uniprot:Q8RY95
Length = 1035
Score = 2232 (790.8 bits), Expect = 2.2e-231, P = 2.2e-231
Identities = 457/844 (54%), Positives = 585/844 (69%)
Query: 6 HGNQSNNPTANVDIVNLLTALARAQGKTEDRS-ISCSSVPDREQLLMILSKINSLPLPAD 64
H +N AN+D++ LLTALA AQGK + + +VPDREQLL IL+KIN+LPLP D
Sbjct: 210 HDTTNNTANANMDLMALLTALACAQGKNAVKPPVGSPAVPDREQLLQILNKINALPLPMD 269
Query: 65 LAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHXX 124
L +KL+N GSL RK H + + QN +N +SPSTMDLLAVLS+TL + SPD LA
Sbjct: 270 LVSKLNNIGSLARKNMDHPTVNPQNDMNG--ASPSTMDLLAVLSTTLGSSSPDALAILSQ 327
Query: 125 XXXXXXXXXXXXXXCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVN 184
E L++ T F SVGGERSS+S QSP +DSD + Q+TR +
Sbjct: 328 GGFGNKDSEKTKLSSYENGVTTNLEKRTFGFSSVGGERSSSSNQSPSQDSDSRGQDTRSS 387
Query: 185 LPLQLFSSSPEDDSPPKLXXXXXXXXXXXXNPIEERSPSSSPVVQTFFPMQSTSETVKSE 244
L LQLF+SSPED+S P + NP+E+RSPSSSPV+Q FP+Q++ ET++S+
Sbjct: 388 LSLQLFTSSPEDESRPTVASSRKYYSSASSNPVEDRSPSSSPVMQELFPLQASPETMRSK 447
Query: 245 KLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTXXXXXXXXXXX 304
N + + R +PLELF SN+ A + +F+ F Q+GY
Sbjct: 448 ----------NHKNSSPRTGCLPLELFGASNRGAADPNFKGFGQQSGYASSGSDYSPPSL 497
Query: 305 XXXDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSM 364
DAQD TG+I+FKL DKDPSQ PGTLR EIYNWLSN PSEMESYIRPGCV+LS+YV+M
Sbjct: 498 NS-DAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAM 556
Query: 365 PYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSS 424
A WEQLE LLQR+ L+Q+S SDFWRNARF+V+TG+QLASHK+G +R KSWRTW+S
Sbjct: 557 SPAAWEQLEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNGKVRCSKSWRTWNS 616
Query: 425 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEII 484
PELISVSP+AVV G+E S +RGR+LTN G I CT MG Y + EVT + C+ +I+DE+
Sbjct: 617 PELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVCRQTIFDELN 676
Query: 485 LAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVI 544
+ K+Q+ P LGR FIEVENGF+G+SFP+IIA+A+ICKEL+ L EF +++ D+
Sbjct: 677 VNSFKVQNVHPGFLGRCFIEVENGFRGDSFPLIIANASICKELNRLGEEFHPKSQ--DM- 733
Query: 545 SEHQAHEYGR-PRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGC 603
+E QA R P SREEVL FLNELGWLFQ+ + S + + SD+SL+RFKFLLV SV+R
Sbjct: 734 TEEQAQSSNRGPTSREEVLCFLNELGWLFQKNQTSELREQSDFSLARFKFLLVCSVERDY 793
Query: 604 CALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSN- 662
CAL++ +LD+LVE NL D L+RE+L+ML EIQLLNRAVK K +MV+LLIHY +
Sbjct: 794 CALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVELLIHYLVNPLTL 853
Query: 663 DTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSP 722
+ +K++F PN+ GPGGITPLHLAACTS SDD+ID LTNDPQEIG SSWN++ DA+G +P
Sbjct: 854 SSSRKFVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTP 913
Query: 723 YSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEI-EQSGLAKEQVHGLSSQFKQRGKS 781
YSYA ++NNH YN LVARKLAD+RN QV++ + E+ +Q+GL+K LS + + S
Sbjct: 914 YSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKR----LSLEMNKSSSS 969
Query: 782 CTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWEN 841
C CA A K +RV GSQ L P IHSMLA+A VCVCVC+F+ P + + F W
Sbjct: 970 CASCATVALKYQRRVSGSQRLFPTPIIHSMLAVATVCVCVCVFMHAFPIVRQGSHFSWGG 1029
Query: 842 LDFG 845
LD+G
Sbjct: 1030 LDYG 1033
>TAIR|locus:2011706 [details] [associations]
symbol:AT1G76580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683
GO:GO:0003700 GO:GO:0006351 EMBL:AC015450 Gene3D:4.10.1100.10
SUPFAM:SSF103612 HOGENOM:HOG000082688 UniGene:At.21192
ProtClustDB:CLSN2679456 EMBL:AY062670 EMBL:BT006626 EMBL:AJ630503
EMBL:AY568676 EMBL:AJ242958 IPI:IPI00531289 IPI:IPI00607526
PIR:H96793 PIR:T52568 RefSeq:NP_177784.6 UniGene:At.504
ProteinModelPortal:Q700C2 SMR:Q700C2 PaxDb:Q700C2 PRIDE:Q700C2
EnsemblPlants:AT1G76580.1 GeneID:843991 KEGG:ath:AT1G76580
GeneFarm:4778 TAIR:At1g76580 eggNOG:NOG128281 OMA:IANATIC
PhylomeDB:Q700C2 Genevestigator:Q700C2 GermOnline:AT1G76580
Uniprot:Q700C2
Length = 988
Score = 2017 (715.1 bits), Expect = 1.4e-208, P = 1.4e-208
Identities = 431/850 (50%), Positives = 570/850 (67%)
Query: 3 IHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPLP 62
+ N SNN N+D++ LLTAL AQG+ E + VP REQLL IL+KI +LPLP
Sbjct: 168 LENRDNTSNN--TNMDVMALLTALVCAQGRNEATTNGSPGVPQREQLLQILNKIKALPLP 225
Query: 63 ADLAAKLHNFGSLNRKTPVHTST-DVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLA- 120
+L +KL+N G L RK P S + QN +N SSPSTMDLLA LS++L + +P+ +A
Sbjct: 226 MNLTSKLNNIGILARKNPEQPSPMNPQNSMN-GASSPSTMDLLAALSASLGSSAPEAIAF 284
Query: 121 -AHXXXXXXXXXXXXXXXXCPEQATPNFLKRTTMDFPSVGG-ERSSTSYQSPVEDSDGQN 178
+ AT + L++ T++FPS GG ER+S++ SP + SD +
Sbjct: 285 LSQGGFGNKESNDRTKLTSSDHSATTS-LEKKTLEFPSFGGGERTSSTNHSPSQYSDSRG 343
Query: 179 QETRVNLPLQLFSSSPEDDSPPKLXXXXXXXXXXXXNPIEERSPSSSPVVQTFFPMQSTS 238
Q+TR +L LQLF+SSPE++S PK+ NP+E+RSPSSSPV+Q FP+ ++
Sbjct: 344 QDTRSSLSLQLFTSSPEEESRPKVASSTKYYSSASSNPVEDRSPSSSPVMQELFPLHTSP 403
Query: 239 ETVKSEKLSIGREVNANVEGNRS-RGSIMPLELFRGSNKAAD-NCSFQSFPYQAGYTXXX 296
ET R N + + S R S +PLELF SN+ A N ++ +Q+GY
Sbjct: 404 ET---------RRYNNYKDTSTSPRTSCLPLELFGASNRGATANPNYNVLRHQSGYASSG 454
Query: 297 XXXXXXXXXXXDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCV 356
+AQ+ TG+I FKLF+KDPSQ P TLR EI+ WLS+ PS+MES+IRPGCV
Sbjct: 455 SDYSPPSLNS-NAQERTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESFIRPGCV 513
Query: 357 ILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVC 416
ILS+YV+M + WEQLE NLLQR+ SLVQDS+ FW N+RFLV+ G+QLASHK G IR+
Sbjct: 514 ILSVYVAMSASAWEQLEENLLQRVRSLVQDSE--FWSNSRFLVNAGRQLASHKHGRIRLS 571
Query: 417 KSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQ 476
KSWRT + PELI+VSPLAVV G+E + +RGRNLTN G ++ C MG YAS EVT +
Sbjct: 572 KSWRTLNLPELITVSPLAVVAGEETALIVRGRNLTNDGMRLRCAHMGNYASMEVTGREHR 631
Query: 477 GSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGA 536
+ DE+ ++ ++Q S LGR FIE+ENG +G++FP+IIA+ATICKEL+ LE EF
Sbjct: 632 LTKVDELNVSSFQVQSASSVSLGRCFIELENGLRGDNFPLIIANATICKELNRLEEEFHP 691
Query: 537 EAKVCDVISEHQAHEYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLV 596
+ DVI E Q RPRSREEVL FLNELGWLFQRK S I D+SL RFKFLLV
Sbjct: 692 K----DVIEE-QIQNLDRPRSREEVLCFLNELGWLFQRKWTSDIHGEPDFSLPRFKFLLV 746
Query: 597 FSVDRGCCALVKAILDILVEGNLSMDGL-SRESLEMLWEIQLLNRAVKMKCRRMVDLLIH 655
SV+R C+L++ +LD++VE NL DGL ++ESL+ML +IQLLNRA+K + +M + LIH
Sbjct: 747 CSVERDYCSLIRTVLDMMVERNLGKDGLLNKESLDMLADIQLLNRAIKRRNTKMAETLIH 806
Query: 656 YSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSIL 715
YS+ N + + +IF P++AGPG ITPLHLAA TS SDD+IDALTNDPQEIG S WN+++
Sbjct: 807 YSV---NPSTRNFIFLPSIAGPGDITPLHLAASTSSSDDMIDALTNDPQEIGLSCWNTLV 863
Query: 716 DASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQSGLAKEQVHGLSSQF 775
DA+G +P+SYA M++NH+YN LVARKLAD+RNGQ+++ + I+Q GL+K LSS+
Sbjct: 864 DATGQTPFSYAAMRDNHSYNTLVARKLADKRNGQISLNIENGIDQIGLSKR----LSSEL 919
Query: 776 KQRGKSCTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVA 835
K +SC CA A K ++V GS+ L P IHSMLA+A VCVCVC+F+ P + +
Sbjct: 920 K---RSCNTCASVALKYQRKVSGSRRLFPTPIIHSMLAVATVCVCVCVFMHAFPMVRQGS 976
Query: 836 PFKWENLDFG 845
F W LD+G
Sbjct: 977 HFSWGGLDYG 986
>TAIR|locus:2101402 [details] [associations]
symbol:SPL12 "squamosa promoter-binding protein-like 12"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 SMART:SM00248 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403 GO:GO:0003700
GO:GO:0006351 EMBL:AL138658 Gene3D:4.10.1100.10 SUPFAM:SSF103612
EMBL:AJ132096 EMBL:AJ132097 EMBL:BT003817 IPI:IPI00548047
PIR:T47827 RefSeq:NP_191562.1 UniGene:At.502 PDB:1WJ0 PDBsum:1WJ0
ProteinModelPortal:Q9S7P5 SMR:Q9S7P5 PRIDE:Q9S7P5
EnsemblPlants:AT3G60030.1 GeneID:825173 KEGG:ath:AT3G60030
GeneFarm:4773 TAIR:At3g60030 eggNOG:NOG266915 HOGENOM:HOG000082688
InParanoid:Q9S7P5 OMA:RWELLEY PhylomeDB:Q9S7P5
ProtClustDB:CLSN2685028 EvolutionaryTrace:Q9S7P5
Genevestigator:Q9S7P5 GermOnline:AT3G60030 Uniprot:Q9S7P5
Length = 927
Score = 742 (266.3 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 192/559 (34%), Positives = 297/559 (53%)
Query: 308 DAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYA 367
DAQ T RI+FKLF K+P+ FP LR +I NWL+++P++MESYIRPGC++L++Y+ A
Sbjct: 397 DAQSRTDRIVFKLFGKEPNDFPVALRGQILNWLAHTPTDMESYIRPGCIVLTIYLRQDEA 456
Query: 368 TWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSW--RTWSSP 425
+WE+L +L + L+ SD W + + QLA +G + + S R+
Sbjct: 457 SWEELCCDLSFSLRRLLDLSDDPLWTDGWLYLRVQNQLAFAFNGQVVLDTSLPLRSHDYS 516
Query: 426 ELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQ--GSIYDEI 483
++I+V PLAV ++ F ++G NL GT++ CT G + QE T + + +
Sbjct: 517 QIITVRPLAVT--KKAQFTVKGINLRRPGTRLLCTVEGTHLVQEATQGGMEERDDLKENN 574
Query: 484 ILAGLKIQDTSPSVLGRFFIEVEN--GFKGNSFPVIIA-DATICKELSLLESEFGAEAKV 540
+ + P GR F+E+E+ G + FP I++ D IC E+ LES
Sbjct: 575 EIDFVNFSCEMPIASGRGFMEIEDQGGLSSSFFPFIVSEDEDICSEIRRLESTL------ 628
Query: 541 CDVISEHQAHEYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSD------YSLSRFKFL 594
E+ S + + F++E+GWL R S + SD +SL RFKFL
Sbjct: 629 ----------EFTGTDSAMQAMDFIHEIGWLLHRSELKSRLAASDHNPEDLFSLIRFKFL 678
Query: 595 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLI 654
+ FS+DR C ++K +L+IL E ++D +L E+ LL+RAV+ + MV++L+
Sbjct: 679 IEFSMDREWCCVMKKLLNILFEEG-TVDPSPDAALS---ELCLLHRAVRKNSKPMVEMLL 734
Query: 655 HYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSI 714
+S N T +F P+ AGPGG+TPLH+AA S+D++DALT DP G +W +
Sbjct: 735 RFSPKKKNQTLAG-LFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNS 793
Query: 715 LDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQ----VTIPVGVEIEQSGLAKEQVHG 770
D +G +P YA ++ + +Y LV RKL+ + + V IP IE + +
Sbjct: 794 RDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNIPESFNIEHKQEKRSPMDS 853
Query: 771 LSSQFKQRGKSCTKCAVAAAKLNKRV---RGSQGLLNRPYIHSMLAIAAVCVCVCLFLRG 827
S + Q + C C +KRV + + RP + SM+AIAAVCVCV L +
Sbjct: 854 SSLEITQINQ-CKLCD------HKRVFVTTHHKSVAYRPAMLSMVAIAAVCVCVALLFKS 906
Query: 828 SPDIGLV-APFKWENLDFG 845
P++ V PF+WE L++G
Sbjct: 907 CPEVLYVFQPFRWELLEYG 925
Score = 46 (21.3 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 18/70 (25%), Positives = 26/70 (37%)
Query: 161 ERSSTSYQSPVEDSDGQNQETRVNLPLQLF---SSSPEDDSPPKLXXXXXXXXXXXXNPI 217
ERSS +P S +Q++R + P Q S S D SP +
Sbjct: 350 ERSSPPPTNPATSSLDYHQDSRQSSPPQTSRRNSDSASDQSPSSSSGDAQSRTDRIVFKL 409
Query: 218 EERSPSSSPV 227
+ P+ PV
Sbjct: 410 FGKEPNDFPV 419
Score = 40 (19.1 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 5 GHG-NQSNNPTANVDIVNLLTALARAQGKTEDRS 37
G+G + S++ T+N ++ LL L+ D++
Sbjct: 207 GNGTSMSDDQTSNYMLITLLKILSNIHSNQSDQT 240
>TAIR|locus:2041329 [details] [associations]
symbol:SPL1 "squamosa promoter binding protein-like 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0032880 "regulation of protein
localization" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
GO:GO:0003700 GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.1100.10
SUPFAM:SSF103612 eggNOG:NOG266915 HOGENOM:HOG000082688
ProtClustDB:CLSN2685028 EMBL:AJ011577 EMBL:AJ011628 EMBL:AJ011629
EMBL:AK230269 IPI:IPI00519879 PIR:T02179 PIR:T02180 PIR:T52601
PIR:T52602 RefSeq:NP_850468.1 UniGene:At.12581
ProteinModelPortal:Q9SMX9 SMR:Q9SMX9 STRING:Q9SMX9 PaxDb:Q9SMX9
PRIDE:Q9SMX9 EnsemblPlants:AT2G47070.1 GeneID:819321
KEGG:ath:AT2G47070 GeneFarm:4762 TAIR:At2g47070 InParanoid:Q9SMX9
OMA:RGNDAYL PhylomeDB:Q9SMX9 Genevestigator:Q9SMX9
GermOnline:AT2G47070 Uniprot:Q9SMX9
Length = 881
Score = 764 (274.0 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 186/574 (32%), Positives = 301/574 (52%)
Query: 284 QSFPYQAGYTXXXXXXXXXXXXXXDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNS 343
QS P Q DAQ TGRI+FKLF K+P++FP LR +I +WLS+S
Sbjct: 332 QSSPPQTSRNSDSASDQSPSSSSEDAQMRTGRIVFKLFGKEPNEFPIVLRGQILDWLSHS 391
Query: 344 PSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGK 403
P++MESYIRPGC++L++Y+ WE+L +L + L+ SD W V
Sbjct: 392 PTDMESYIRPGCIVLTIYLRQAETAWEELSDDLGFSLGKLLDLSDDPLWTTGWIYVRVQN 451
Query: 404 QLASHKDGNIRV--CKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTF 461
QLA +G + V S ++ +ISV PLA+ ++ F ++G NL GT++ C+
Sbjct: 452 QLAFVYNGQVVVDTSLSLKSRDYSHIISVKPLAIAATEKAQFTVKGMNLRQRGTRLLCSV 511
Query: 462 MGGYASQEVT--SSTCQGSIYDEI--ILAGLKIQDTSPSVLGRFFIEVEN-GFKGNSFP- 515
G Y QE T S+T + + + I+ + P + GR F+E+E+ G + FP
Sbjct: 512 EGKYLIQETTHDSTTREDDDFKDNSEIVECVNFSCDMPILSGRGFMEIEDQGLSSSFFPF 571
Query: 516 VIIADATICKELSLLESEFGAEAKVCDVISEHQAHEYGRPRSREEVLHFLNELGWLFQR- 574
+++ D +C E+ +LE+ E+ S ++ + F++E+GWL R
Sbjct: 572 LVVEDDDVCSEIRILETTL----------------EFTGTDSAKQAMDFIHEIGWLLHRS 615
Query: 575 KRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWE 634
K S + L RF++L+ FS+DR CA+++ +L++ +G ++ S S L E
Sbjct: 616 KLGESDPNPGVFPLIRFQWLIEFSMDREWCAVIRKLLNMFFDG--AVGEFSSSSNATLSE 673
Query: 635 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDD 694
+ LL+RAV+ + MV++L+ Y ++ +F P+ AGP G+TPLH+AA S+D
Sbjct: 674 LCLLHRAVRKNSKPMVEMLLRYIPKQQRNS----LFRPDAAGPAGLTPLHIAAGKDGSED 729
Query: 695 IIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPV 754
++DALT DP +G +W + D++G +P YA ++ + +Y L+ RK+ + + + V
Sbjct: 730 VLDALTEDPAMVGIEAWKTCRDSTGFTPEDYARLRGHFSYIHLIQRKINKKSTTEDHVVV 789
Query: 755 GVEIEQSGLA-KEQVHG-LSSQFKQRGKSCTKCAVAAAKLNKRVRGSQGLLNRPYIHSML 812
+ + S KE G ++S + C C R + + RP + SM+
Sbjct: 790 NIPVSFSDREQKEPKSGPMASALEITQIPCKLCDHKLVYGTTR----RSVAYRPAMLSMV 845
Query: 813 AIAAVCVCVCLFLRGSPDIGLV-APFKWENLDFG 845
AIAAVCVCV L + P++ V PF+WE LD+G
Sbjct: 846 AIAAVCVCVALLFKSCPEVLYVFQPFRWELLDYG 879
Score = 45 (20.9 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 6 HGNQSNNPTANVDIVNLLTALARAQGKTEDRSI 38
+GN S++ ++N ++ LL L+ T D+ +
Sbjct: 187 NGNPSDDHSSNYLLITLLKILSNMHNHTGDQDL 219
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 847 805 0.00098 121 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 628 (67 KB)
Total size of DFA: 412 KB (2199 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 68.39u 0.15s 68.54t Elapsed: 00:00:03
Total cpu time: 68.39u 0.15s 68.54t Elapsed: 00:00:03
Start: Tue May 21 20:44:30 2013 End: Tue May 21 20:44:33 2013