Query 003109
Match_columns 847
No_of_seqs 252 out of 867
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 13:37:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.8E-22 6.1E-27 196.0 14.3 129 590-747 36-164 (169)
2 4gpm_A Engineered protein OR26 99.9 2.9E-21 1E-25 187.5 15.7 126 591-745 4-129 (169)
3 2jab_A H10-2-G3; HER2, darpin, 99.9 5.5E-21 1.9E-25 175.1 15.0 124 590-742 13-136 (136)
4 1d9s_A Cyclin-dependent kinase 99.9 1.5E-21 5.3E-26 178.8 10.3 125 590-744 11-136 (136)
5 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.5E-20 5.2E-25 166.0 13.9 124 592-744 3-126 (126)
6 1awc_B Protein (GA binding pro 99.8 3.6E-20 1.2E-24 172.2 14.6 125 591-745 2-126 (153)
7 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.7E-20 9.2E-25 173.0 13.4 124 591-744 38-162 (162)
8 3v30_A DNA-binding protein rfx 99.8 2.7E-20 9.4E-25 175.4 13.3 127 590-745 35-161 (172)
9 2y1l_E Darpin-8.4; hydrolase-i 99.8 9.5E-20 3.3E-24 172.4 16.3 123 591-742 47-169 (169)
10 3v31_A Ankyrin repeat family A 99.8 9.6E-20 3.3E-24 170.9 16.0 126 591-745 36-161 (167)
11 2rfm_A Putative ankyrin repeat 99.8 6E-20 2.1E-24 176.4 13.8 126 591-745 35-160 (192)
12 3jxi_A Vanilloid receptor-rela 99.8 2.5E-20 8.5E-25 186.4 11.1 134 590-745 92-251 (260)
13 3twr_A Tankyrase-2; ankyrin re 99.8 9.4E-20 3.2E-24 170.6 14.3 128 590-745 7-134 (165)
14 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.3E-19 4.6E-24 171.4 15.5 126 591-745 14-139 (169)
15 1awc_B Protein (GA binding pro 99.8 7.1E-20 2.4E-24 170.2 13.1 119 591-738 34-152 (153)
16 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.9E-20 1.7E-24 171.2 11.8 125 590-744 4-128 (162)
17 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.1E-20 2.1E-24 158.1 11.4 93 633-744 1-93 (93)
18 3twr_A Tankyrase-2; ankyrin re 99.8 3.6E-20 1.2E-24 173.4 10.7 123 591-743 42-164 (165)
19 3v30_A DNA-binding protein rfx 99.8 8.6E-20 3E-24 172.0 13.3 126 592-745 3-128 (172)
20 1bi7_B P16INK4A, MTS1, multipl 99.8 1.4E-20 4.8E-25 176.2 7.7 126 590-745 11-137 (156)
21 3f6q_A Integrin-linked protein 99.8 1.3E-19 4.3E-24 172.7 14.3 126 592-745 6-131 (179)
22 2rfm_A Putative ankyrin repeat 99.8 1.2E-19 3.9E-24 174.4 13.5 123 591-742 68-190 (192)
23 2etb_A Transient receptor pote 99.8 4.9E-20 1.7E-24 184.3 11.1 134 590-745 89-247 (256)
24 3v31_A Ankyrin repeat family A 99.8 9.5E-20 3.2E-24 170.9 12.4 125 592-745 4-128 (167)
25 4b93_B Ankyrin repeat domain-c 99.8 1.5E-19 5.1E-24 186.5 14.6 137 590-755 85-225 (269)
26 3hra_A Ankyrin repeat family p 99.8 2.9E-19 9.8E-24 171.3 15.5 125 591-742 72-201 (201)
27 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.6E-19 5.4E-24 167.2 13.1 122 591-741 2-123 (156)
28 1oy3_D Transcription factor in 99.8 1.2E-19 4.2E-24 181.4 13.3 143 590-757 77-267 (282)
29 3jxi_A Vanilloid receptor-rela 99.8 1.7E-19 5.8E-24 180.4 13.9 132 591-745 46-211 (260)
30 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2E-19 6.7E-24 166.6 13.3 121 591-742 36-156 (156)
31 2etb_A Transient receptor pote 99.8 2.2E-19 7.4E-24 179.6 14.5 138 590-745 42-207 (256)
32 2pnn_A Transient receptor pote 99.8 9.7E-20 3.3E-24 184.2 11.5 134 590-745 100-259 (273)
33 2rfa_A Transient receptor pote 99.8 2.5E-19 8.7E-24 175.8 13.9 132 590-745 74-223 (232)
34 1k1a_A B-cell lymphoma 3-encod 99.8 6.3E-19 2.2E-23 172.7 16.6 130 591-745 79-209 (241)
35 4hbd_A KN motif and ankyrin re 99.8 3.1E-19 1.1E-23 183.6 14.8 135 590-743 110-274 (276)
36 1dcq_A PYK2-associated protein 99.8 2.9E-19 9.8E-24 185.8 14.6 143 589-754 128-273 (278)
37 2rfa_A Transient receptor pote 99.8 3.7E-19 1.3E-23 174.6 14.3 143 590-745 36-184 (232)
38 3f6q_A Integrin-linked protein 99.8 1E-19 3.6E-24 173.3 10.0 126 591-745 39-164 (179)
39 3aaa_C Myotrophin, protein V-1 99.8 1.4E-19 4.6E-24 162.8 9.9 116 591-738 7-122 (123)
40 2pnn_A Transient receptor pote 99.8 3.9E-19 1.3E-23 179.8 14.2 148 590-745 53-219 (273)
41 3c5r_A BARD-1, BRCA1-associate 99.8 3.1E-20 1.1E-24 169.6 5.6 125 590-743 9-133 (137)
42 2dzn_A Probable 26S proteasome 99.8 4.7E-19 1.6E-23 172.6 14.0 129 591-745 72-201 (228)
43 2f8y_A Notch homolog 1, transl 99.8 7.9E-19 2.7E-23 170.9 15.6 125 592-744 59-183 (223)
44 3aji_A 26S proteasome non-ATPa 99.8 1E-18 3.4E-23 171.0 16.2 126 591-745 73-198 (231)
45 1oy3_D Transcription factor in 99.8 6.4E-19 2.2E-23 176.2 14.9 136 590-745 8-184 (282)
46 3ljn_A Hypothetical protein; a 99.8 3.2E-19 1.1E-23 187.7 13.2 132 590-745 137-270 (364)
47 1ikn_D Protein (I-kappa-B-alph 99.8 2.4E-19 8.1E-24 177.2 11.3 133 590-745 77-210 (236)
48 1yyh_A HN1;, notch 1, ankyrin 99.8 5.2E-19 1.8E-23 177.7 13.8 125 592-744 91-215 (253)
49 2f8y_A Notch homolog 1, transl 99.8 8.1E-19 2.8E-23 170.8 14.4 126 591-745 92-217 (223)
50 1s70_B 130 kDa myosin-binding 99.8 2E-18 7E-23 175.2 17.9 148 591-755 73-272 (299)
51 3deo_A Signal recognition part 99.8 3.8E-19 1.3E-23 171.0 11.8 111 590-730 43-154 (183)
52 3t8k_A Uncharacterized protein 99.8 2.9E-19 1E-23 175.7 11.1 128 590-745 37-180 (186)
53 3utm_A Tankyrase-1; tankyrase, 99.8 3.1E-18 1.1E-22 175.7 18.1 138 591-745 91-306 (351)
54 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.3E-19 7.7E-24 180.0 9.4 126 591-745 37-165 (239)
55 2vge_A RELA-associated inhibit 99.8 3.4E-19 1.2E-23 179.5 10.7 127 590-745 20-149 (229)
56 3b7b_A Euchromatic histone-lys 99.8 2.1E-18 7.1E-23 169.4 15.7 127 591-745 77-203 (237)
57 3ehr_A Osteoclast-stimulating 99.8 1.6E-19 5.6E-24 177.6 7.7 126 591-745 73-199 (222)
58 1k1a_A B-cell lymphoma 3-encod 99.8 1.6E-18 5.6E-23 169.7 14.4 132 592-744 10-141 (241)
59 1ycs_B 53BP2, P53BP2; ankyrin 99.8 4.2E-19 1.4E-23 178.0 10.1 125 591-745 5-129 (239)
60 1yyh_A HN1;, notch 1, ankyrin 99.8 1.2E-18 4E-23 175.1 13.3 123 591-742 124-246 (253)
61 3ui2_A Signal recognition part 99.8 9.8E-19 3.3E-23 176.8 12.4 125 590-744 44-185 (244)
62 3kea_A K1L; tropism, ANK repea 99.8 7.8E-19 2.7E-23 181.1 11.9 123 592-745 32-155 (285)
63 3ljn_A Hypothetical protein; a 99.8 9.2E-19 3.1E-23 184.2 12.2 142 590-745 83-237 (364)
64 3aji_A 26S proteasome non-ATPa 99.8 2.7E-18 9.3E-23 167.9 14.3 126 591-745 40-165 (231)
65 3lvq_E ARF-GAP with SH3 domain 99.8 1.3E-18 4.6E-23 194.1 13.6 132 593-747 134-268 (497)
66 2dzn_A Probable 26S proteasome 99.8 2.1E-18 7.1E-23 168.0 13.0 128 591-742 36-163 (228)
67 2xai_A ASB-9, ankyrin repeat a 99.8 3.1E-18 1.1E-22 173.2 14.6 134 591-755 69-206 (261)
68 1wdy_A 2-5A-dependent ribonucl 99.8 3.8E-18 1.3E-22 169.5 14.8 127 591-745 5-131 (285)
69 4g8k_A 2-5A-dependent ribonucl 99.8 5.5E-18 1.9E-22 176.4 15.7 144 591-744 25-194 (337)
70 1wdy_A 2-5A-dependent ribonucl 99.8 4.2E-18 1.5E-22 169.2 14.2 129 591-746 148-280 (285)
71 1ikn_D Protein (I-kappa-B-alph 99.8 1.3E-18 4.5E-23 171.9 10.4 133 590-745 44-177 (236)
72 3hra_A Ankyrin repeat family p 99.8 4.1E-18 1.4E-22 163.2 13.2 128 591-745 39-171 (201)
73 3utm_A Tankyrase-1; tankyrase, 99.8 3.7E-18 1.2E-22 175.1 13.7 127 591-745 24-150 (351)
74 4b93_B Ankyrin repeat domain-c 99.8 4E-19 1.4E-23 183.3 6.6 117 591-738 119-235 (269)
75 2xai_A ASB-9, ankyrin repeat a 99.8 8.2E-18 2.8E-22 170.1 15.9 125 591-745 36-160 (261)
76 4g8k_A 2-5A-dependent ribonucl 99.8 4.9E-18 1.7E-22 176.8 13.8 128 591-745 168-299 (337)
77 1n11_A Ankyrin; clathrin, BAND 99.7 5.3E-18 1.8E-22 182.3 14.3 125 592-745 246-370 (437)
78 2b0o_E UPLC1; arfgap, structur 99.7 3.8E-18 1.3E-22 179.5 12.8 131 592-745 152-285 (301)
79 1s70_B 130 kDa myosin-binding 99.7 9.7E-18 3.3E-22 170.2 14.5 116 591-735 40-155 (299)
80 3b7b_A Euchromatic histone-lys 99.7 1.3E-17 4.6E-22 163.6 14.7 126 591-744 11-136 (237)
81 3d9h_A CDNA FLJ77766, highly s 99.7 1.5E-17 5.2E-22 171.2 15.2 124 591-745 125-248 (285)
82 2fo1_E LIN-12 protein; beta-ba 99.7 4.2E-18 1.4E-22 182.1 11.3 133 590-745 234-372 (373)
83 3eu9_A Huntingtin-interacting 99.7 2.5E-17 8.5E-22 160.0 14.9 126 591-744 76-202 (240)
84 3aaa_C Myotrophin, protein V-1 99.7 1.5E-17 5.2E-22 149.4 11.9 94 633-745 6-99 (123)
85 3d9h_A CDNA FLJ77766, highly s 99.7 3.3E-17 1.1E-21 168.7 15.8 125 591-745 92-216 (285)
86 3jue_A Arfgap with coiled-coil 99.7 2E-17 7E-22 180.3 14.6 127 592-745 200-327 (368)
87 1n11_A Ankyrin; clathrin, BAND 99.7 1.9E-17 6.5E-22 178.0 13.8 126 590-744 277-402 (437)
88 3c5r_A BARD-1, BRCA1-associate 99.7 1.7E-17 5.7E-22 151.5 10.8 94 633-745 9-102 (137)
89 2l6b_A NR1C; ankyrin, consensu 99.7 1.1E-17 3.9E-22 148.2 8.7 94 633-745 8-101 (115)
90 1sw6_A Regulatory protein SWI6 99.7 6.3E-18 2.2E-22 177.9 7.9 135 590-745 130-309 (327)
91 3kea_A K1L; tropism, ANK repea 99.7 1.4E-17 4.9E-22 171.7 10.1 124 591-745 95-221 (285)
92 3eu9_A Huntingtin-interacting 99.7 6.2E-17 2.1E-21 157.2 13.8 126 591-745 109-236 (240)
93 1d9s_A Cyclin-dependent kinase 99.7 1.3E-17 4.4E-22 152.7 8.3 93 633-745 11-104 (136)
94 3t8k_A Uncharacterized protein 99.7 7.3E-18 2.5E-22 165.7 6.9 124 593-745 8-147 (186)
95 2jab_A H10-2-G3; HER2, darpin, 99.7 4.1E-17 1.4E-21 149.3 10.5 94 633-745 13-106 (136)
96 4hbd_A KN motif and ankyrin re 99.7 4.1E-17 1.4E-21 167.8 11.5 138 593-745 78-243 (276)
97 2fo1_E LIN-12 protein; beta-ba 99.7 3.2E-17 1.1E-21 175.3 10.9 134 590-745 124-264 (373)
98 2zgd_A 3 repeat synthetic anky 99.7 7.9E-17 2.7E-21 143.6 10.4 87 633-738 23-109 (110)
99 1n0r_A 4ANK, 4 ankyrin repeats 99.7 2E-16 6.8E-21 139.5 11.2 94 633-745 1-94 (126)
100 2vge_A RELA-associated inhibit 99.7 1.7E-16 5.7E-21 159.9 11.2 94 633-745 20-113 (229)
101 3ehr_A Osteoclast-stimulating 99.7 2.6E-16 8.9E-21 154.7 11.7 95 633-745 72-166 (222)
102 3deo_A Signal recognition part 99.6 3.2E-16 1.1E-20 150.7 9.7 93 633-745 43-136 (183)
103 1bi7_B P16INK4A, MTS1, multipl 99.6 3.5E-16 1.2E-20 146.3 8.6 93 633-745 11-104 (156)
104 1sw6_A Regulatory protein SWI6 99.6 3.1E-16 1.1E-20 165.1 6.6 126 593-745 99-231 (327)
105 3ui2_A Signal recognition part 99.6 6.9E-16 2.4E-20 156.0 8.7 93 633-745 44-137 (244)
106 2aja_A Ankyrin repeat family p 99.6 1.3E-16 4.3E-21 174.4 1.0 130 591-744 92-224 (376)
107 2l6b_A NR1C; ankyrin, consensu 99.6 1.5E-15 5.2E-20 134.5 5.5 105 590-723 8-112 (115)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.6 1.3E-14 4.5E-19 124.7 10.3 88 592-702 3-90 (93)
109 2b0o_E UPLC1; arfgap, structur 99.5 2.8E-15 9.7E-20 157.7 5.6 108 590-732 189-299 (301)
110 2aja_A Ankyrin repeat family p 99.5 1.6E-15 5.4E-20 165.7 0.3 122 590-745 127-251 (376)
111 3jue_A Arfgap with coiled-coil 99.5 8.4E-14 2.9E-18 151.8 10.1 95 632-745 197-294 (368)
112 3lvq_E ARF-GAP with SH3 domain 99.4 1.6E-13 5.4E-18 153.3 9.4 93 635-745 133-233 (497)
113 1dcq_A PYK2-associated protein 99.4 3.1E-13 1.1E-17 140.4 11.0 100 634-745 130-231 (278)
114 2zgd_A 3 repeat synthetic anky 99.4 1.4E-12 4.9E-17 116.0 10.6 87 590-699 23-109 (110)
115 2cxk_A Camta1, calmodulin bind 63.9 19 0.00064 32.4 7.3 47 424-471 6-52 (95)
116 1uad_C RSEC5, exocyst complex 44.0 35 0.0012 30.5 5.7 40 423-464 6-46 (99)
117 1pby_A Quinohemoprotein amine 33.1 53 0.0018 37.5 6.1 44 421-464 272-320 (489)
118 1jmx_A Amine dehydrogenase; ox 30.1 61 0.0021 37.1 6.0 31 421-452 281-311 (494)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=1.8e-22 Score=196.03 Aligned_cols=129 Identities=20% Similarity=0.209 Sum_probs=110.1
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..++..+++.|++.. .+++.. +. .|+||||+|+++|+.++|++||++|+
T Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~g----ad~~~~-----d~-~g~TpLh~A~~~g~~~~v~~Ll~~ga----------- 94 (169)
T 4gpm_A 36 DGRTPLHHAAENGHKEVVKLLISKG----ADVNAK-----DS-DGRTPLHHAAENGHKEVVKLLISKGA----------- 94 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcc----cchhhh-----cc-CCCCHHHHHHHcCCHHHHHHHHHCcC-----------
Confidence 3468999999999999999999853 444433 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccccC
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRN 747 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~~~ 747 (847)
++|.+|..|+||||+||.. |..+++++|+++ +|+++.+|.+|+||||+|+++|+.+++++|++++++..-
T Consensus 95 -dvn~~d~~G~TpLh~A~~~-g~~~~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 95 -DVNAKDSDGRTPLHHAAEN-GHKEVVKLLISK------GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp -CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred -CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 6799999999999999985 778899999987 578999999999999999999999999999999998753
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.86 E-value=2.9e-21 Score=187.49 Aligned_cols=126 Identities=22% Similarity=0.241 Sum_probs=111.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
+...|+.|+.+|+.++|+.||+. +++++.. +. .|+||||+|+..++.+++++||++|+
T Consensus 4 lg~~L~~Aa~~G~~~~v~~Ll~~----Gadvn~~-----d~-~g~t~l~~a~~~~~~~~~~~ll~~ga------------ 61 (169)
T 4gpm_A 4 LGKRLIEAAENGNKDRVKDLIEN----GADVNAS-----DS-DGRTPLHHAAENGHKEVVKLLISKGA------------ 61 (169)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT----TCCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHC----CCCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHhccc------------
Confidence 44678899999999999999985 3555533 22 59999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++.+|..|+||||+||.. +..+++++|+++ ||++|.+|.+|+||||+|+++|+.+++++|++++++.
T Consensus 62 d~~~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~------gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 62 DVNAKDSDGRTPLHHAAEN-GHKEVVKLLISK------GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV 129 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred chhhhccCCCCHHHHHHHc-CCHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 6789999999999999985 778899999988 5789999999999999999999999999999998764
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=5.5e-21 Score=175.15 Aligned_cols=124 Identities=17% Similarity=0.199 Sum_probs=109.0
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
...++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++|+++|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~----------- 71 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANG----ADVNAK-----DE-YGLTPLYLATAHGHLEIVEVLLKNGA----------- 71 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 4579999999999999999999963 444433 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 742 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~ 742 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|.+|.||||+|+.+|+.+++++|++++
T Consensus 72 -~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 72 -DVNAVDAIGFTPLHLAAFI-GHLEIAEVLLKH------GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp -CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred -CCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 5788999999999999986 677899999987 5689999999999999999999999999998864
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=1.5e-21 Score=178.81 Aligned_cols=125 Identities=19% Similarity=0.205 Sum_probs=110.5
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
...++||+|+.+|+.++++.|++.. .+++.. +. .|+||||+|+. |+.++|++|+++|+
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~----------- 68 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAG----ADPNAL-----NR-FGRRPIQVMMM-GSAQVAELLLLHGA----------- 68 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TCCTTTTTSTT-SCHHHHHHHHHHTC-----------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcC----CCcCCc-----CC-CCCCHHHHHHc-CCHHHHHHHHHCCC-----------
Confidence 3468999999999999999999863 444433 22 58999999999 99999999999998
Q ss_pred CCCCCCCCC-CChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 670 FPPNLAGPG-GITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 670 ~d~na~d~~-G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
++|.++.. |.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 69 -~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 69 -EPNCADPATLTRPVHDAARE-GFLDTLVVLHRA------GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp -CSSCCBTTTTBCHHHHHHHH-TCHHHHHHHHHT------CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred -CCCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 57899999 99999999985 677899999987 578999999999999999999999999999999875
No 5
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.5e-20 Score=165.97 Aligned_cols=124 Identities=22% Similarity=0.215 Sum_probs=109.5
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.+++++|+++|+ +
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 60 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAG----ADVNAK-----DK-NGRTPLHLAARNGHLEVVKLLLEAGA------------D 60 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred ccHHHHHHHcCcHHHHHHHHHcC----CCCCCc-----CC-CCCcHHHHHHHcCcHHHHHHHHHcCC------------C
Confidence 47999999999999999999963 333322 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
++.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 61 ~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 61 VNAKDKNGRTPLHLAARN-GHLEVVKLLLEA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CcccCCCCCcHHHHHHHc-ChHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 788999999999999985 678899999987 567999999999999999999999999999999875
No 6
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=3.6e-20 Score=172.16 Aligned_cols=125 Identities=16% Similarity=0.144 Sum_probs=103.7
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
+.++|+.|+..|+.++++.|++... +... +. .|.||||+|+..|+.++|++|+++|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~----~~~~------~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 58 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA----PFTT------DW-LGTSPLHLAAQYGHFSTTEVLLRAGV------------ 58 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC----CCCC------CT-TCCCHHHHHHHHTCHHHHHHHHTTTC------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC----CCCc------CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 3578999999999999999998642 2220 12 48899999999999999999999987
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 59 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 126 (153)
T 1awc_B 59 SRDARTKVDRTPLHMAASE-GHANIVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV 126 (153)
T ss_dssp CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCCCHHHHHHHc-ChHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 5688888999999999985 667799999887 5678999999999999999999999999999887653
No 7
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.83 E-value=2.7e-20 Score=173.00 Aligned_cols=124 Identities=15% Similarity=0.125 Sum_probs=105.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+. |+.++++.|++.. .+++.. +. .|.||||+|++.|+.++|++|+++|+
T Consensus 38 g~t~L~~A~~-~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 94 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIARRLLLRG----ANPDLK-----DR-TGFAVIHDAARAGFLDTLQTLLEFQA------------ 94 (162)
T ss_dssp SCCHHHHCCS-SCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------
T ss_pred CccHHHHHHc-CcHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 4689999999 9999999999863 344322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSW-NSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~-vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++ ++.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 95 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 95 DVNIEDNEGNLPLHLAAKE-GHLRVVEFLVKH------TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHH------SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 5788999999999999985 678899999987 344 689999999999999999999999999999875
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.83 E-value=2.7e-20 Score=175.39 Aligned_cols=127 Identities=18% Similarity=0.119 Sum_probs=111.9
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|++.|+.++|++|+++|+
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~----------- 93 (172)
T 3v30_A 35 RGFTPLIWASAFGEIETVRFLLEWG----ADPHIL-----AK-ERESALSLASTGGYTDIVGLLLERDV----------- 93 (172)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHT----CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHTTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC----CCchhh-----cc-cCCCHHHHHHHCCCHHHHHHHHHcCC-----------
Confidence 3458999999999999999999874 333322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 94 -~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 94 -DINIYDWNGGTPLLYAVRG-NHVKCVEALLAR------GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp -CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 5789999999999999985 678899999987 5789999999999999999999999999999998876
No 9
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.83 E-value=9.5e-20 Score=172.38 Aligned_cols=123 Identities=18% Similarity=0.206 Sum_probs=96.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++|+++|+
T Consensus 47 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------ 104 (169)
T 2y1l_E 47 GWTPLHLAAFNGHLEIVEVLLKNG----ADVNAV-----DH-AGMTPLRLAALFGHLEIVEVLLKNGA------------ 104 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC----CCCCcc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 357888888888888888888852 333322 22 47888888888888888888888887
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 742 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~ 742 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++
T Consensus 105 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 105 DVNANDMEGHTPLHLAAMF-GHLEIVEVLLKN------GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 5677888888888888874 667788888887 4678888888888888888888888888887653
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=9.6e-20 Score=170.89 Aligned_cols=126 Identities=17% Similarity=0.115 Sum_probs=110.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. .+.+.. +. .|.||||+|+..|+.++|++|+++|+
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 93 (167)
T 3v31_A 36 GFTPLMWAAAHGQIAVVEFLLQNG----ADPQLL-----GK-GRESALSLACSKGYTDIVKMLLDCGV------------ 93 (167)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHHTC------------
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcC----CCCCCc-----CC-CCCcHHHHHHHcCCHHHHHHHHHCCC------------
Confidence 458999999999999999999863 333322 22 58899999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|.+|+||||+|+.+|+.+++++|++++.+.
T Consensus 94 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 94 DVNEYDWNGGTPLLYAVHG-NHVKCVKMLLES------GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 5788999999999999985 678899999987 5689999999999999999999999999999988765
No 11
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.82 E-value=6e-20 Score=176.40 Aligned_cols=126 Identities=15% Similarity=0.065 Sum_probs=107.1
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++... +++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 92 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFD----KLEDK-----DI-EGSTALIWAVKNNRLGIAEKLLSKGS------------ 92 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHC----CTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHHTC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcc----ccccc-----cc-cCccHHHHHHHcCCHHHHHHHHHCCC------------
Confidence 3589999999999999999999743 33322 22 48999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 93 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 93 NVNTKDFSGKTPLMWSIIF-GYSEMSYFLLEH------GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI 160 (192)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCCcHHHHHHHc-CCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 5788899999999999985 667799999987 5678999999999999999999999999999887663
No 12
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.82 E-value=2.5e-20 Score=186.43 Aligned_cols=134 Identities=17% Similarity=0.162 Sum_probs=110.5
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHH--------HHhhccCchHHHHHHHcCCHHHHHHHHH---cCC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRE--------SLEMLWEIQLLNRAVKMKCRRMVDLLIH---YSL 658 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~--------~~~~l~g~TpLH~AV~~g~~eIVeLLL~---~GA 658 (847)
..+++||+|+.+|+.+++++||+.. .+++..... ......|+||||+|++.|+.+||++||+ +|+
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 167 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKG----ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA 167 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCC----CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 4569999999999999999999963 344322100 0000248999999999999999999999 787
Q ss_pred CCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCc--------HHHHHHHhCCCCCCCCCCCC-------ccCCCCCCCHH
Q 003109 659 TSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDS--------DDIIDALTNDPQEIGPSSWN-------SILDASGHSPY 723 (847)
Q Consensus 659 ~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~--------e~VveLLL~~p~~vGagA~v-------narD~~G~TPL 723 (847)
++|.+|..|+||||+||..++. .+++++|+++ ||++ +.+|.+|+|||
T Consensus 168 ------------~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 168 ------------DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp ------------CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHH
T ss_pred ------------CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh------CcccccccchhhcccCCCCCHH
Confidence 6799999999999999975442 4799999987 4566 78999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhccc
Q 003109 724 SYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 724 HyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|+|+.+|+.+++++|++++.+.
T Consensus 230 ~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 230 MMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhCCCc
Confidence 9999999999999999998876
No 13
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.82 E-value=9.4e-20 Score=170.61 Aligned_cols=128 Identities=19% Similarity=0.199 Sum_probs=109.3
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
...++|+.|+..|+.++++.|++. +..+.... +. .|.||||+|++.|+.++|++|+++|+
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~---~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~----------- 66 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTV---QSVNCRDI-----EG-RQSTPLHFAAGYNRVSVVEYLLQHGA----------- 66 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCT---TTTTCCCT-----TT-TCCCHHHHHHHTTCHHHHHHHHHTTC-----------
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHc---CCCCcccc-----cc-CCCCHHHHHHHcChHHHHHHHHhcCC-----------
Confidence 346899999999999999999875 22222221 22 47899999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 67 -~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 134 (165)
T 3twr_A 67 -DVHAKDKGGLVPLHNACSY-GHYEVAELLVKH------GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134 (165)
T ss_dssp -CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred -CCCccCCCCCCHHHHHHHc-CcHHHHHHHHhC------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5788999999999999985 677899999987 5689999999999999999999999999999987764
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.82 E-value=1.3e-19 Score=171.36 Aligned_cols=126 Identities=20% Similarity=0.192 Sum_probs=111.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++|+.|+..|+.++++.|++.. .+++.. +. .|.||||+|++.|+.++|++|+++|+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 71 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANG----ADVNAE-----DA-SGWTPLHLAAFNGHLEIVEVLLKNGA------------ 71 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 458999999999999999999963 444432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++-
T Consensus 72 ~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 139 (169)
T 2y1l_E 72 DVNAVDHAGMTPLRLAALF-GHLEIVEVLLKN------GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV 139 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5788999999999999985 678899999988 5689999999999999999999999999999987763
No 15
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.82 E-value=7.1e-20 Score=170.21 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=105.2
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 34 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 91 (153)
T 1awc_B 34 GTSPLHLAAQYGHFSTTEVLLRAG----VSRDAR-----TK-VDRTPLHMAASEGHANIVEVLLKHGA------------ 91 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTT----CCTTCC-----CT-TCCCHHHHHHHHTCHHHHHHHHTTTC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHHHcChHHHHHHHHHcCC------------
Confidence 358999999999999999999853 344322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLV 738 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLL 738 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|
T Consensus 92 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 92 DVNAKDMLKMTALHWATEH-NHQEVVELLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 6789999999999999985 678899999998 578999999999999999999999999987
No 16
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=4.9e-20 Score=171.22 Aligned_cols=125 Identities=17% Similarity=0.162 Sum_probs=109.8
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
++.++||+|+.+|+.++++.|++. +.+.+.. +. .|.||||+|+. |+.++|++|+++|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~----~~~~~~~-----~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~----------- 61 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN----NVNVNAQ-----NG-FGRTALQVMKL-GNPEIARRLLLRGA----------- 61 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS----CCCTTCC-----CT-TSCCHHHHCCS-SCHHHHHHHHHTTC-----------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC----CCCcccc-----Cc-cCccHHHHHHc-CcHHHHHHHHHcCC-----------
Confidence 457999999999999999999974 3444432 22 58999999999 99999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
++|.++..|.||||+|+.. +..+++++|+++ ++++|.+|.+|.||||+|+..|+.+++++|++++++
T Consensus 62 -~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 62 -NPDLKDRTGFAVIHDAARA-GFLDTLQTLLEF------QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp -CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred -CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 5788999999999999985 677899999987 568999999999999999999999999999999876
No 17
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=6.1e-20 Score=158.13 Aligned_cols=93 Identities=24% Similarity=0.209 Sum_probs=85.0
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
+|+||||+|++.|+.++|++|+++|+ ++|.+|..|.||||+|+.. +..+++++|+++ ++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~ 61 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA------------DVNAKDKNGRTPLHLAARN-GHLEVVKLLLEA------GADV 61 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC------------CCcccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCC
Confidence 37899999999999999999999998 5789999999999999985 678899999987 5789
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
+.+|.+|+||||+|+..|+.+++++|++++++
T Consensus 62 ~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999998864
No 18
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.81 E-value=3.6e-20 Score=173.43 Aligned_cols=123 Identities=18% Similarity=0.167 Sum_probs=106.9
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 99 (165)
T 3twr_A 42 QSTPLHFAAGYNRVSVVEYLLQHG----ADVHAK-----DK-GGLVPLHNACSYGHYEVAELLVKHGA------------ 99 (165)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcChHHHHHHHHhcC----CCCCcc-----CC-CCCCHHHHHHHcCcHHHHHHHHhCCC------------
Confidence 459999999999999999999963 444433 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLA 743 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a 743 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|.+|.||||+|+. |+.+++++|+++++
T Consensus 100 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 100 VVNVADLWKFTPLHEAAAK-GKYEICKLLLQH------GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 5788999999999999985 678899999988 57899999999999999877 99999999998875
No 19
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.81 E-value=8.6e-20 Score=171.98 Aligned_cols=126 Identities=18% Similarity=0.147 Sum_probs=108.5
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+..|+.++++.|++.. ...++.. +. .|+||||+|++.|+.++|++||++|+ +
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~---~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 61 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKG---DNLVNKP-----DE-RGFTPLIWASAFGEIETVRFLLEWGA------------D 61 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTC---SGGGGCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHHTC------------C
T ss_pred hhhHHHHHHcCCHHHHHHHHHcC---cccccCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 36899999999999999999863 1112211 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+|.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 62 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 128 (172)
T 3v30_A 62 PHILAKERESALSLASTG-GYTDIVGLLLER------DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADL 128 (172)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred chhhcccCCCHHHHHHHC-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 788999999999999985 678899999987 5689999999999999999999999999999987664
No 20
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=1.4e-20 Score=176.24 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=108.4
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
...++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|+ .|+.++|++||++|+
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~----------- 68 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAG----ANPNAP-----NS-YGRRPIQVMM-MGSARVAELLLLHGA----------- 68 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTT----CCTTCC-----CS-SSCCTTTSSC-TTCHHHHHHHHTTTC-----------
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHH-cCCHHHHHHHHHcCC-----------
Confidence 3468999999999999999999853 444432 22 5899999995 999999999999998
Q ss_pred CCCCCCCCCCCh-HHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGPGGIT-PLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~~G~T-PLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.++..|.| |||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 69 -~~~~~d~~g~ttpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~ 137 (156)
T 1bi7_B 69 -EPNCADPATLTRPVHDAARE-GFLDTLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT 137 (156)
T ss_dssp -CCCCCCTTTCCCHHHHHHHH-TCHHHHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---
T ss_pred -CCCCcCCCCCcHHHHHHHHC-CCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC
Confidence 67899999999 99999986 677899999987 5789999999999999999999999999999998875
No 21
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=1.3e-19 Score=172.69 Aligned_cols=126 Identities=21% Similarity=0.186 Sum_probs=109.0
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
.++|+.|+..|+.++++.||+. ++.+++.. +. .|+||||+|++.|+.++|++|+++|+ +
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~---~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 64 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDN---TENDLNQG-----DD-HGFSPLHWACREGRSAVVEMLIMRGA------------R 64 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHC---TTSCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred HHHHHHHHHcCCHHHHHHHHhc---Cccccccc-----CC-CCCCHHHHHHHcCcHHHHHHHHHcCC------------C
Confidence 4679999999999999999985 23333322 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+|.++..|.||||+|+.. +..+++++|+++ ++++|.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 65 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 65 INVMNRGDDTPLHLAASH-GHRDIVQKLLQY------KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131 (179)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 788999999999999985 678899999988 5789999999999999999999999999999988764
No 22
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.81 E-value=1.2e-19 Score=174.43 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=109.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++|+++|+
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 125 (192)
T 2rfm_A 68 GSTALIWAVKNNRLGIAEKLLSKG----SNVNTK-----DF-SGKTPLMWSIIFGYSEMSYFLLEHGA------------ 125 (192)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------
T ss_pred CccHHHHHHHcCCHHHHHHHHHCC----CCCCCC-----CC-CCCcHHHHHHHcCCHHHHHHHHHCCC------------
Confidence 469999999999999999999974 333322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 742 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~ 742 (847)
++|.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++.+
T Consensus 126 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 126 NVNDRNLEGETPLIVASKY-GRSEIVKKLLEL------GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CSSCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 5789999999999999985 677899999987 5789999999999999999999999999998865
No 23
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=4.9e-20 Score=184.31 Aligned_cols=134 Identities=14% Similarity=0.089 Sum_probs=110.8
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHH-------HhhccCchHHHHHHHcCCHHHHHHHHH---cCCC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRES-------LEMLWEIQLLNRAVKMKCRRMVDLLIH---YSLT 659 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~-------~~~l~g~TpLH~AV~~g~~eIVeLLL~---~GA~ 659 (847)
..+++||+|+.+|+.++++.||+.. .+++...... .....|.||||+|++.|+.++|++||+ +|+
T Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga- 163 (256)
T 2etb_A 89 QGHSALHIAIEKRSLQCVKLLVENG----ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA- 163 (256)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC-
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcC----CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC-
Confidence 3569999999999999999999963 3443221000 000028999999999999999999999 887
Q ss_pred CCCCCCCCcCCCCCCCCCCCChHHHHHHhc-CCcHH-------HHHHHhCCCCCCCCCCCC-------ccCCCCCCCHHH
Q 003109 660 SSNDTPQKYIFPPNLAGPGGITPLHLAACT-SDSDD-------IIDALTNDPQEIGPSSWN-------SILDASGHSPYS 724 (847)
Q Consensus 660 ~~~~s~~~~l~d~na~d~~G~TPLHlAA~~-~g~e~-------VveLLL~~p~~vGagA~v-------narD~~G~TPLH 724 (847)
++|.+|..|+||||+|+.. .+..+ ++++|+++ ||++ +.+|..|+||||
T Consensus 164 -----------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 164 -----------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM------GARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp -----------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHSTTCCGGGCCCTTSCCHHH
T ss_pred -----------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc------CCCcccccccccccCCCCCCHHH
Confidence 6799999999999999973 35666 99999987 5678 899999999999
Q ss_pred HHHHcCCHHHHHHHHHhhccc
Q 003109 725 YALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 725 yAa~~G~~eiIeLLl~K~a~~ 745 (847)
+|+.+|+.+++++|++++.+.
T Consensus 227 ~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 227 LAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999999998765
No 24
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=9.5e-20 Score=170.92 Aligned_cols=125 Identities=19% Similarity=0.180 Sum_probs=109.8
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
.++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++|+++|+ +
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 61 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQE----NVINHT-----DE-EGFTPLMWAAAHGQIAVVEFLLQNGA------------D 61 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHS----SCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred cchHHHHHHCCCHHHHHHHHHcC----CCcCCC-----CC-CCCCHHHHHHHCCCHHHHHHHHHcCC------------C
Confidence 47899999999999999999973 333322 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++..+..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 62 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 128 (167)
T 3v31_A 62 PQLLGKGRESALSLACSK-GYTDIVKMLLDC------GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 128 (167)
T ss_dssp TTCCCTTCCCHHHHHHHH-TCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCcCCCCCcHHHHHHHc-CCHHHHHHHHHC------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 788999999999999986 677899999987 5689999999999999999999999999999987764
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.81 E-value=1.5e-19 Score=186.53 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=116.9
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..++|||+|+.+|+.+++++||+.. .+.+.. ...|.||||+|+..++.+++++||++|+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~----a~~~~~------~~~g~t~l~~a~~~~~~~~~~~Ll~~g~----------- 143 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHG----ANAGAR------NADQAVPLHLACQQGHFQVVKCLLDSNA----------- 143 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTT----CCTTCC------CTTCCCHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcC----CCcCcc------CCCCCCccccccccChHHHHHHHHHCCC-----------
Confidence 3569999999999999999999863 333322 2258999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR---- 745 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~---- 745 (847)
++|.+|..|+||||+||.. |..+++++|+++ ||++|.+|..|+||||+|+.+|+.++|++|++++++-
T Consensus 144 -~~n~~d~~g~TpL~~A~~~-g~~~~v~~Ll~~------gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d 215 (269)
T 4b93_B 144 -KPNKKDLSGNTPLIYACSG-GHHELVALLLQH------GASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLN 215 (269)
T ss_dssp -CSCCCCTTCCCHHHHHHHT-TCGGGHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred -CCCCCCCCCCCHHHHHHHC-CCHHHHHHHHHC------CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 6799999999999999985 677899999987 5789999999999999999999999999999998875
Q ss_pred cCCccccccC
Q 003109 746 RNGQVTIPVG 755 (847)
Q Consensus 746 ~~~~v~~~i~ 755 (847)
.+|.--+.+.
T Consensus 216 ~~G~TpL~~A 225 (269)
T 4b93_B 216 KRQRTAVDCA 225 (269)
T ss_dssp TTSCCSGGGS
T ss_pred CCCCCHHHHH
Confidence 2455555554
No 26
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.81 E-value=2.9e-19 Score=171.28 Aligned_cols=125 Identities=19% Similarity=0.179 Sum_probs=106.2
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCcC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYS-LTSSNDTPQKYI 669 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~G-A~~~~~s~~~~l 669 (847)
.+++||+|+..|+.++++.|++. ++.+.+.. +. .|.||||+|++.|+.++|++|+++| +
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~---~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------- 131 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKH---ATPDLNKH-----NR-YGGNALIPAAEKGHIDNVKLLLEDGRE----------- 131 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHH---SCCCTTCC-----CT-TSCCSHHHHHHTTCHHHHHHHHHHCCC-----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhc---cCcccccc-----cC-CCCcHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 45899999999999999999975 33344322 22 5889999999999999999999998 4
Q ss_pred CCCCCCCCCCChHHHHHHhcCC----cHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 003109 670 FPPNLAGPGGITPLHLAACTSD----SDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 742 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g----~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~ 742 (847)
++|.++..|.||||+|+..+. ..+++++|+++ |++++.+|..|.||||+|+.+|+.+++++|++++
T Consensus 132 -~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 132 -DIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN------GADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp -CTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred -CcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC------CCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 678899999999999998644 27899999988 5789999999999999999999999999998764
No 27
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=1.6e-19 Score=167.21 Aligned_cols=122 Identities=20% Similarity=0.216 Sum_probs=80.7
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++|++|+..|..++++.|++. . +.+.+.. +. .|.||||+ +..|+.++|++|+++|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~--~~~~~~~-----~~-~g~t~L~~-~~~~~~~~v~~Ll~~g~------------ 59 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E--LVHPDAL-----NR-FGKTALQV-MMFGSTAIALELLKQGA------------ 59 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T--CCCTTCC-----CT-TSCCHHHH-SCTTCHHHHHHHHHTTC------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h--CcCcccc-----CC-CCCcHHHH-HHcCCHHHHHHHHHCCC------------
Confidence 45677777777777777777765 1 1222222 12 36677777 77777777777777776
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARK 741 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K 741 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|.+|+||||+|+.+|+.+++++|+++
T Consensus 60 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 60 SPNVQDTSGTSPVHDAART-GFLDTLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred CCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 4566677777777777764 556677777765 356777777777777777777777777777665
No 28
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=1.2e-19 Score=181.39 Aligned_cols=143 Identities=20% Similarity=0.153 Sum_probs=110.1
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhcc-------------------------------------------ccCCCCcH
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGN-------------------------------------------LSMDGLSR 626 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~-------------------------------------------vdid~~s~ 626 (847)
..+++||+|+..|+.++++.|++...... ++++.
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 153 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA--- 153 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC---
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC---
Confidence 34699999999999999999997432100 00110
Q ss_pred HHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCC-CCChHHHHHHhcCCcHHHHHHHhCCCCC
Q 003109 627 ESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGP-GGITPLHLAACTSDSDDIIDALTNDPQE 705 (847)
Q Consensus 627 ~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~-~G~TPLHlAA~~~g~e~VveLLL~~p~~ 705 (847)
....|.||||+|++.|+.++|++||++|+ ++|.++. .|.||||+||.. +..+++++|+++
T Consensus 154 ---~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~--- 214 (282)
T 1oy3_D 154 ---ENYDGHTPLHVAVIHKDAEMVRLLRDAGA------------DLNKPEPTCGRTPLHLAVEA-QAASVLELLLKA--- 214 (282)
T ss_dssp ---CCTTSCCHHHHHHHTTCHHHHHHHHHHTC------------CTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHT---
T ss_pred ---cCCCCcCHHHHHHHcCCHHHHHHHHHcCC------------CCCCCCCCCCcCHHHHHHHc-CCHHHHHHHHHc---
Confidence 11258999999999999999999999998 5677775 499999999985 678899999998
Q ss_pred CCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcccc----CCccccccCcc
Q 003109 706 IGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRR----NGQVTIPVGVE 757 (847)
Q Consensus 706 vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~~----~~~v~~~i~~~ 757 (847)
|+++|.+|..|.||||+|+.+|+.+++++|++++++.. +|..-+.+..+
T Consensus 215 ---gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 215 ---GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp ---TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred ---CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 57899999999999999999999999999999999872 45555554443
No 29
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=1.7e-19 Score=180.38 Aligned_cols=132 Identities=22% Similarity=0.243 Sum_probs=108.8
Q ss_pred hhHHHHHHH---hcCchhHHHHHHHHHHhcc-------ccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 003109 591 FKFLLVFSV---DRGCCALVKAILDILVEGN-------LSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTS 660 (847)
Q Consensus 591 ~k~LL~FAv---drGw~AVVK~LLd~l~~g~-------vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~ 660 (847)
.+++||+|+ ..|+.++++.||+...+.+ ..... ....|+||||+|++.|+.+||++||++|++
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~- 118 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRD------VYYRGQTALHIAIERRCKHYVELLVEKGAD- 118 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCC------SSEESBCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccc------cccCCCCHHHHHHHcCCHHHHHHHHhCCCC-
Confidence 469999999 7799999999999865421 11110 111589999999999999999999999984
Q ss_pred CCCCCCCcCCCCCCCC--------------CCCChHHHHHHhcCCcHHHHHHHhCCCCCCC-CCCCCccCCCCCCCHHHH
Q 003109 661 SNDTPQKYIFPPNLAG--------------PGGITPLHLAACTSDSDDIIDALTNDPQEIG-PSSWNSILDASGHSPYSY 725 (847)
Q Consensus 661 ~~~s~~~~l~d~na~d--------------~~G~TPLHlAA~~~g~e~VveLLL~~p~~vG-agA~vnarD~~G~TPLHy 725 (847)
+|.++ ..|.||||+||.. +..+++++|++. | .++++|.+|.+|+||||+
T Consensus 119 -----------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~----~~~ga~~~~~d~~g~TpLh~ 182 (260)
T 3jxi_A 119 -----------VHAQARGRFFQPKDEGGYFYFGELPLSLAACT-NQPHIVHYLTEN----GHKQADLRRQDSRGNTVLHA 182 (260)
T ss_dssp -----------TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHT-TCHHHHHHHHHC----SSCCCCTTCCCTTSCCHHHH
T ss_pred -----------cCccccccccCcccccccccCCCCHHHHHHHc-CCHHHHHHHHhc----cccCCCCcccCCCCCcHHHH
Confidence 45554 6899999999985 678899999993 1 267899999999999999
Q ss_pred HHHcCC---------HHHHHHHHHhhccc
Q 003109 726 ALMKNN---------HAYNKLVARKLADR 745 (847)
Q Consensus 726 Aa~~G~---------~eiIeLLl~K~a~~ 745 (847)
|++.|+ .+++++|++++++.
T Consensus 183 A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 183 LVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 999888 79999999998875
No 30
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.80 E-value=2e-19 Score=166.58 Aligned_cols=121 Identities=18% Similarity=0.184 Sum_probs=106.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+ +..|+.++++.|++.. .+++.. +. .|.||||+|++.|+.++|++|+++|+
T Consensus 36 g~t~L~~-~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 92 (156)
T 1bd8_A 36 GKTALQV-MMFGSTAIALELLKQG----ASPNVQ-----DT-SGTSPVHDAARTGFLDTLKVLVEHGA------------ 92 (156)
T ss_dssp SCCHHHH-SCTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCcHHHH-HHcCCHHHHHHHHHCC----CCCCCc-----CC-CCCCHHHHHHHcCcHHHHHHHHHcCC------------
Confidence 4699999 9999999999999863 444432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 742 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~ 742 (847)
++|.+|..|.||||+|+.. +..+++++|+++ ++++.+|.+|.||||+|+.+|+.+++++|++++
T Consensus 93 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 156 (156)
T 1bd8_A 93 DVNVPDGTGALPIHLAVQE-GHTAVVSFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156 (156)
T ss_dssp CSCCCCTTSCCHHHHHHHH-TCHHHHHHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTTC
T ss_pred CCCCcCCCCCcHHHHHHHh-ChHHHHHHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhhC
Confidence 5789999999999999985 678899999985 468999999999999999999999999998763
No 31
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.80 E-value=2.2e-19 Score=179.63 Aligned_cols=138 Identities=22% Similarity=0.244 Sum_probs=109.4
Q ss_pred hhhHHHHHHHhc---CchhHHHHHHHHHHhcc-cc--CCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 003109 590 RFKFLLVFSVDR---GCCALVKAILDILVEGN-LS--MDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSND 663 (847)
Q Consensus 590 R~k~LL~FAvdr---Gw~AVVK~LLd~l~~g~-vd--id~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~ 663 (847)
..+++||+|+.. |+.++++.||+...+.+ .+ ++.... . ....|.||||+|++.|+.++|++||++|++
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~-~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---- 115 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCT-D-EFYQGHSALHIAIEKRSLQCVKLLVENGAD---- 115 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCC-S-TTTTTCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccc-c-ccccCCCHHHHHHHcCCHHHHHHHHHcCCC----
Confidence 346999999999 99999999999876522 00 000000 0 012489999999999999999999999984
Q ss_pred CCCCcCCCCCCCCCC-------------CChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHH--
Q 003109 664 TPQKYIFPPNLAGPG-------------GITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALM-- 728 (847)
Q Consensus 664 s~~~~l~d~na~d~~-------------G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~-- 728 (847)
+|.++.. |.||||+||.. +..+++++|++.+. .++++|.+|.+|+||||+|+.
T Consensus 116 --------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~~~---~ga~~n~~d~~g~TpLh~A~~~~ 183 (256)
T 2etb_A 116 --------VHLRACGRFFQKHQGTCFYFGELPLSLAACT-KQWDVVTYLLENPH---QPASLEATDSLGNTVLHALVMIA 183 (256)
T ss_dssp --------TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT-TCHHHHHHHHHCSS---CCCCTTCCCTTSCCHHHHHHHHC
T ss_pred --------CCcccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhccc---cCCCcCccCCCCCCHHHHHHHcc
Confidence 4555544 99999999985 67889999998310 167899999999999999999
Q ss_pred cCCHH-------HHHHHHHhhccc
Q 003109 729 KNNHA-------YNKLVARKLADR 745 (847)
Q Consensus 729 ~G~~e-------iIeLLl~K~a~~ 745 (847)
+|+.+ ++++|++++++.
T Consensus 184 ~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 184 DNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHHHHcCCCc
Confidence 88988 999999998875
No 32
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=9.7e-20 Score=184.22 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=109.5
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHH--------HHhhccCchHHHHHHHcCCHHHHHHHHH---cCC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRE--------SLEMLWEIQLLNRAVKMKCRRMVDLLIH---YSL 658 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~--------~~~~l~g~TpLH~AV~~g~~eIVeLLL~---~GA 658 (847)
..+++||+|+..|+.+++++||+.. .+++..... ......|.||||+|++.|+.++|++||+ +|+
T Consensus 100 ~g~tpL~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 175 (273)
T 2pnn_A 100 KGQTALHIAIERRNMTLVTLLVENG----ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175 (273)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC----CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC
Confidence 3569999999999999999999963 344322100 0000148999999999999999999999 887
Q ss_pred CCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCc--------HHHHHHHhCCCCCCCCCCCCc-------cCCCCCCCHH
Q 003109 659 TSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDS--------DDIIDALTNDPQEIGPSSWNS-------ILDASGHSPY 723 (847)
Q Consensus 659 ~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~--------e~VveLLL~~p~~vGagA~vn-------arD~~G~TPL 723 (847)
++|.+|..|+||||+|+..++. .+++++|+++ ++++| .+|.+|+|||
T Consensus 176 ------------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~n~~~~~~~~~d~~g~TpL 237 (273)
T 2pnn_A 176 ------------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL------GAKLHPTLKLEEITNRKGLTPL 237 (273)
T ss_dssp ------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHH
T ss_pred ------------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh------hhhcccccccccccCCCCCCHH
Confidence 6789999999999999986442 5799999987 45675 5999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhccc
Q 003109 724 SYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 724 HyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|+|+.+|+.+++++|++++++.
T Consensus 238 ~~A~~~g~~~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 238 ALAASSGKIGVLAYILQREIHE 259 (273)
T ss_dssp HHHHHTTCHHHHHHHHHHHTC-
T ss_pred HHHHHhChHHHHHHHHHCCCCC
Confidence 9999999999999999999954
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.80 E-value=2.5e-19 Score=175.77 Aligned_cols=132 Identities=18% Similarity=0.141 Sum_probs=109.0
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHH--------HHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRE--------SLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSS 661 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~--------~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~ 661 (847)
..+++||+|+.+|+.++++.|++.. .+++..... ..+ ..|.||||+|++.|+.++|++||++|+
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga--- 145 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARG----ASVSARATGSVFHYRPHNLI-YYGEHPLSFAACVGSEEIVRLLIEHGA--- 145 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCCSGGGSCCTTCSC-CCCSSHHHHHHHHTCHHHHHHHHHTTC---
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCC----CCCCcccCCcceeecccccc-cCCCCHHHHHHHcCCHHHHHHHHHCCC---
Confidence 3469999999999999999999964 333322100 001 148999999999999999999999998
Q ss_pred CCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHH----HHHhCCCCCCCCCCCC------ccCCCCCCCHHHHHHHcCC
Q 003109 662 NDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDII----DALTNDPQEIGPSSWN------SILDASGHSPYSYALMKNN 731 (847)
Q Consensus 662 ~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~Vv----eLLL~~p~~vGagA~v------narD~~G~TPLHyAa~~G~ 731 (847)
++|.+|..|.||||+|+.. +..+++ ++|+++ +++. +.+|..|+||||+|+.+|+
T Consensus 146 ---------~~~~~d~~g~t~L~~A~~~-~~~~~~~~i~~~Ll~~------g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 146 ---------DIRAQDSLGNTVLHILILQ-PNKTFACQMYNLLLSY------DGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp ---------CTTCCCTTSCCHHHHHHTC-SCHHHHHHHHHHHHHT------TCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred ---------CCCCCCCCCCCHHHHHHHc-CChHHHHHHHHHHHhc------CCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 6799999999999999985 566666 999987 3444 6899999999999999999
Q ss_pred HHHHHHHHHhhccc
Q 003109 732 HAYNKLVARKLADR 745 (847)
Q Consensus 732 ~eiIeLLl~K~a~~ 745 (847)
.+++++|++++...
T Consensus 210 ~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 210 IVMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCccc
Confidence 99999999998776
No 34
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.80 E-value=6.3e-19 Score=172.68 Aligned_cols=130 Identities=19% Similarity=0.198 Sum_probs=111.9
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++......++.+.. +. .|.||||+|++.|+.+++++|+++|+
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------ 140 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEAR-----NY-DGLTALHVAVNTECQETVQLLLERGA------------ 140 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccccccc-----Cc-CCCcHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 4589999999999999999999854333343322 22 58999999999999999999999998
Q ss_pred CCCCCC-CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAG-PGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d-~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++..+ ..|.||||+|+.. +..+++++|+++ ++++|.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 141 ~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 141 DIDAVDIKSGRSPLIHAVEN-NSLSMVQLLLQH------GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209 (241)
T ss_dssp CTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcccccccCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 567777 7899999999985 678899999988 5789999999999999999999999999999998774
No 35
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.80 E-value=3.1e-19 Score=183.58 Aligned_cols=135 Identities=21% Similarity=0.146 Sum_probs=107.5
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHH-hcc-ccCCCCcHHHHh---------------------------hccCchHHHH
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILV-EGN-LSMDGLSRESLE---------------------------MLWEIQLLNR 640 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~-~g~-vdid~~s~~~~~---------------------------~l~g~TpLH~ 640 (847)
..+++||+|+..|+.++++.||+... +-+ .+.....+.... ...|+||||+
T Consensus 110 ~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~ 189 (276)
T 4hbd_A 110 NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALML 189 (276)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 34699999999999999999999643 100 011111111100 1148899999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhC-CCCCCCCCCCCccCCCCC
Q 003109 641 AVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN-DPQEIGPSSWNSILDASG 719 (847)
Q Consensus 641 AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~-~p~~vGagA~vnarD~~G 719 (847)
|+++|+.++|++||++|+ ++|.+|..|+||||+|+.. +..+++++|++ . +++++.+|.+|
T Consensus 190 A~~~g~~~~v~~Ll~~ga------------d~n~~d~~G~TpLh~A~~~-g~~~iv~~Ll~~~------gad~~~~d~~g 250 (276)
T 4hbd_A 190 AVSHGRVDVVKALLACEA------------DVNVQDDDGSTALMCACEH-GHKEIAGLLLAVP------SCDISLTDRDG 250 (276)
T ss_dssp HHHTTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHTST------TCCTTCCCTTS
T ss_pred HHHcCCHHHHHHHHhCCC------------CCCCCCCCCCCHHHHHHHC-CCHHHHHHHHhcC------CCCCcCcCCCC
Confidence 999999999999999998 6789999999999999986 67789999998 4 57899999999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhhc
Q 003109 720 HSPYSYALMKNNHAYNKLVARKLA 743 (847)
Q Consensus 720 ~TPLHyAa~~G~~eiIeLLl~K~a 743 (847)
+||||+|+.+|+.+++++|+++.+
T Consensus 251 ~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 251 STALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccC
Confidence 999999999999999999998865
No 36
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=2.9e-19 Score=185.83 Aligned_cols=143 Identities=18% Similarity=0.125 Sum_probs=117.9
Q ss_pred hhhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCC
Q 003109 589 SRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKM---KCRRMVDLLIHYSLTSSNDTP 665 (847)
Q Consensus 589 ~R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~---g~~eIVeLLL~~GA~~~~~s~ 665 (847)
...-..|+.|+..|....++.|+... .+.............|+||||+|++. |+.++|++||++|+
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll~~g----~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga------- 196 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAYADG----VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG------- 196 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTT----CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS-------
T ss_pred chhhhhhhhHhhhcccHHHHHHHHhh----cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC-------
Confidence 34457899999999999999888853 33221100000112489999999999 99999999999998
Q ss_pred CCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 666 QKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 666 ~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+||.. |+.+++++|+++ ||+++++|.+|.||||+|+..|+.+++++|+++++++
T Consensus 197 -----~in~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 197 -----NLDKQTGKGSTALHYCCLT-DNAECLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp -----CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred -----CccccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 6799999999999999985 678899999997 6789999999999999999999999999999999998
Q ss_pred cCCcccccc
Q 003109 746 RNGQVTIPV 754 (847)
Q Consensus 746 ~~~~v~~~i 754 (847)
.+.|+.+.+
T Consensus 265 ~~~~~~v~~ 273 (278)
T 1dcq_A 265 FNSHVHVEY 273 (278)
T ss_dssp CCSSCCCCC
T ss_pred CCcceeeec
Confidence 777766654
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.80 E-value=3.7e-19 Score=174.57 Aligned_cols=143 Identities=16% Similarity=0.123 Sum_probs=112.7
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhcc-ccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGN-LSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP-QK 667 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~-vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~-~~ 667 (847)
..+++||+|+..|+.++++.|++...+-. ...+. .+. .|.||||+|++.|+.++|++|+++|++...... ..
T Consensus 36 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-----~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 109 (232)
T 2rfa_A 36 MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTS-----ELY-EGQTALHIAVINQNVNLVRALLARGASVSARATGSV 109 (232)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCS-----TTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccc-----cCC-CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcc
Confidence 34689999999999999999999754311 00011 122 589999999999999999999999996422111 12
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHH----HHHHHhhc
Q 003109 668 YIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYN----KLVARKLA 743 (847)
Q Consensus 668 ~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiI----eLLl~K~a 743 (847)
+.+.++..+..|.||||+|+.. +..+++++|+++ |+++|.+|..|+||||+|+.+|+.+++ ++|+++++
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACV-GSEEIVRLLIEH------GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred eeecccccccCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 2334566677999999999986 677899999987 578999999999999999999999988 88888877
Q ss_pred cc
Q 003109 744 DR 745 (847)
Q Consensus 744 ~~ 745 (847)
+.
T Consensus 183 ~~ 184 (232)
T 2rfa_A 183 GD 184 (232)
T ss_dssp SC
T ss_pred ch
Confidence 54
No 38
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.80 E-value=1e-19 Score=173.25 Aligned_cols=126 Identities=18% Similarity=0.165 Sum_probs=112.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++||++|+
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 96 (179)
T 3f6q_A 39 GFSPLHWACREGRSAVVEMLIMRG----ARINVM-----NR-GDDTPLHLAASHGHRDIVQKLLQYKA------------ 96 (179)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 458999999999999999999863 444432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+..++.+++++|++++++.
T Consensus 97 ~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 97 DINAVNEHGNVPLHYACFW-GQDQVAEDLVAN------GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred CCCccCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 5789999999999999985 678899999998 5789999999999999999999999999999998876
No 39
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=1.4e-19 Score=162.82 Aligned_cols=116 Identities=14% Similarity=0.089 Sum_probs=97.4
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 64 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKG----EDVNRT-----LE-GGRKPLHYAADCGQLEILEFLLLKGA------------ 64 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT----CCTTSC-----CT-TSSCHHHHHHHTTCHHHHHHHHTTTC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcC----CCcCcc-----CC-CCCcHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 468999999999999999999853 344332 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLV 738 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLL 738 (847)
++|.+|..|+||||+|+.. +..+++++|+++ +++++.+|.+|.||||+|+. .++.++|
T Consensus 65 ~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~---~~~~~ll 122 (123)
T 3aaa_C 65 DINAPDKHHITPLLSAVYE-GHVSCVKLLLSK------GADKTVKGPDGLTAFEATDN---QAIKALL 122 (123)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHCCC---HHHHHHH
T ss_pred CCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHhCC---HHHHHHh
Confidence 5789999999999999985 677899999987 57899999999999999954 4444444
No 40
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=3.9e-19 Score=179.82 Aligned_cols=148 Identities=16% Similarity=0.084 Sum_probs=109.3
Q ss_pred hhhHHHHHHHhc---CchhHHHHHHHHHHhcc-----ccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003109 590 RFKFLLVFSVDR---GCCALVKAILDILVEGN-----LSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSS 661 (847)
Q Consensus 590 R~k~LL~FAvdr---Gw~AVVK~LLd~l~~g~-----vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~ 661 (847)
..+++||+|+.. |+.++++.||+...+.+ ++.+... .+. .|+||||+|++.|+.++|++||++|++..
T Consensus 53 ~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~---~d~-~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 53 TGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTD---SYY-KGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp TCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCS---TTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhccccc---ccC-CCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 346999999986 99999999999865421 1111000 012 58999999999999999999999998431
Q ss_pred CCCCCCc--CCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCC--------
Q 003109 662 NDTPQKY--IFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNN-------- 731 (847)
Q Consensus 662 ~~s~~~~--l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~-------- 731 (847)
.....++ ..+.+..+..|.||||+||.. +..+++++|++.+. .++++|.+|.+|+||||+|+..|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~---~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 204 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACT-NQLAIVKFLLQNSW---QPADISARDSVGNTVLHALVEVADNTVDNTKF 204 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHT-TCHHHHHHHHHCSS---CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHH
T ss_pred ccccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhccc---CCCCceeeCCCCCcHHHHHHHccCcchhHHHH
Confidence 1000000 001122334899999999985 67889999999310 267899999999999999999998
Q ss_pred -HHHHHHHHHhhccc
Q 003109 732 -HAYNKLVARKLADR 745 (847)
Q Consensus 732 -~eiIeLLl~K~a~~ 745 (847)
.+++++|++++++.
T Consensus 205 ~~~~v~~Ll~~ga~~ 219 (273)
T 2pnn_A 205 VTSMYNEILILGAKL 219 (273)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhc
Confidence 89999999998875
No 41
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.79 E-value=3.1e-20 Score=169.61 Aligned_cols=125 Identities=20% Similarity=0.142 Sum_probs=103.7
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~----------- 67 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNG----SDPNVK-----DH-AGWTPLHEACNHGHLKVVELLLQHKA----------- 67 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTT----CCSCCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC----CCCCcC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 4568999999999999999999853 344432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLA 743 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a 743 (847)
+++.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+..++.+++++|.+..+
T Consensus 68 -~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 68 -LVNTTGYQNDSPLHDAAKN-GHVDIVKLLLSY------GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp -CTTCCCGGGCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred -cccCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 5788999999999999985 677899999987 56899999999999999999999998888776543
No 42
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.79 E-value=4.7e-19 Score=172.62 Aligned_cols=129 Identities=21% Similarity=0.172 Sum_probs=109.2
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.... .+++.. +. .|.||||+|++.|+.+++++|+++|+
T Consensus 72 g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------ 131 (228)
T 2dzn_A 72 GWTPFHIACSVGNLEVVKSLYDRPLK--PDLNKI-----TN-QGVTCLHLAVGKKWFEVSQFLIENGA------------ 131 (228)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHSSSSC--CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC--cccccC-----Cc-CCCCHHHHHHHcCCHhHHHHHHHcCC------------
Confidence 45899999999999999999985311 333322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH-Hhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVA-RKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl-~K~a~~ 745 (847)
+++.++..|.||||+|+.. +..+++++|+++ | .+++|.+|..|+||||+|+.+|+.+++++|+ +++++.
T Consensus 132 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~----g-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 132 SVRIKDKFNQIPLHRAASV-GSLKLIELLCGL----G-KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201 (228)
T ss_dssp CSCCCCTTSCCHHHHHHHT-TCHHHHHHHHTT----T-CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS
T ss_pred CccccCCCCCCHHHHHHHc-CCHHHHHHHHhc----C-cccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 5789999999999999985 678899999987 2 2689999999999999999999999999999 777765
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.79 E-value=7.9e-19 Score=170.85 Aligned_cols=125 Identities=16% Similarity=0.144 Sum_probs=73.5
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+..|+.++++.|++.. ..+.+.. +. .|.||||+|++.|+.++|++|+++|+ +
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~---~~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 117 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNR---ATDLDAR-----MH-DGTTPLILAARLAVEGMLEDLINSHA------------D 117 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBT---TSCTTCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC---CCCcccC-----CC-CCCcHHHHHHHhCcHHHHHHHHHcCC------------C
Confidence 46666666666666666666632 1112111 11 35666666666666666666666665 3
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
+|.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 118 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 183 (223)
T 2f8y_A 118 VNAVDDLGKSALHWAAAV-NNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 183 (223)
T ss_dssp TTCBCTTSCBHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CcCcCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455566666666666653 445566666655 345666666666666666666666666666666554
No 44
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.79 E-value=1e-18 Score=171.03 Aligned_cols=126 Identities=17% Similarity=0.130 Sum_probs=107.6
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|++.|+.+++++|+++|+
T Consensus 73 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------ 130 (231)
T 3aji_A 73 GWSPLHIAASAGXDEIVKALLVKG----AHVNAV-----NQ-NGCTPLHYAASKNRHEIAVMLLEGGA------------ 130 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCHHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 458999999999999999999853 344322 22 48899999999999999999999988
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++-
T Consensus 131 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 131 NPDAKDHYDATAMHRAAAK-GNLKMVHILLFY------KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI 198 (231)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCcCCCCCcHHHHHHHc-CCHHHHHHHHhc------CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Confidence 5788899999999999986 667799999987 5679999999999999999999999999999988764
No 45
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.79 E-value=6.4e-19 Score=176.17 Aligned_cols=136 Identities=18% Similarity=0.089 Sum_probs=107.4
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+.+|+.++++.||+...... .++.. +. .|+||||+|++.|+.++|++||++|+
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~-----~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga----------- 69 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHE-YLDLQ-----ND-LGQTALHLAAILGEASTVEKLYAAGA----------- 69 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHHTTSG-GGGCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcc-ccccc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 34699999999999999999999754311 01211 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCC-----------------------------------------CC
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEI-----------------------------------------GP 708 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~v-----------------------------------------Ga 708 (847)
+++.++..|+||||+|+.. +..+++++|+++.... ..
T Consensus 70 -~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (282)
T 1oy3_D 70 -GVLVAERGGHTALHLACRV-RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW 147 (282)
T ss_dssp -CSSCCCTTSCCHHHHHTTT-TCHHHHHHHSSSCCSSCCCC-----------------------------------CCCG
T ss_pred -CCCCCCCCCCCHHHHHHHc-CCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhh
Confidence 5688888999999999874 6777999988762110 01
Q ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 709 SSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 709 gA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++++.+|..|.||||+|+++|+.+++++|++++++-
T Consensus 148 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 184 (282)
T 1oy3_D 148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184 (282)
T ss_dssp GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred hhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 2347888999999999999999999999999887664
No 46
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.79 E-value=3.2e-19 Score=187.69 Aligned_cols=132 Identities=16% Similarity=0.134 Sum_probs=113.5
Q ss_pred hhhHHHHHHHhcC--chhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 003109 590 RFKFLLVFSVDRG--CCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQK 667 (847)
Q Consensus 590 R~k~LL~FAvdrG--w~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~ 667 (847)
...++||+|+..| +.++++.||+.. .+++.. +. .|+||||+|++.|+.++|++||++|++.
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~g----a~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------- 199 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLG----ASPTAK-----DK-ADETPLMRAMEFRNREALDLMMDTVPSK------- 199 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHHCSCS-------
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcC----CCCccc-----CC-CCCCHHHHHHHcCCHHHHHHHHhccccc-------
Confidence 3469999999999 999999999974 344322 22 5899999999999999999999999841
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 668 YIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 668 ~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
...++|.++..|.||||+||.. ++.+++++|+++ ||++|.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 200 ~~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 200 SSLRLDYANKQGNSHLHWAILI-NWEDVAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp SSCCTTCCCTTCCCTTHHHHTT-TCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred ccccccccCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 1124789999999999999984 778899999998 5789999999999999999999999999999987663
No 47
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.79 E-value=2.4e-19 Score=177.25 Aligned_cols=133 Identities=20% Similarity=0.192 Sum_probs=109.9
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..|+.++++.|++......... ........|.||||+|++.|+.++|++||++|+
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----------- 141 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHS----ILKATNYNGHTCLHLASIHGYLGIVELLVSLGA----------- 141 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC----GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHH----HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 34689999999999999999999643211000 000112258999999999999999999999998
Q ss_pred CCCCCCCC-CCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGP-GGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~-~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.++. .|.||||+|+.. +..+++++|+++ ||+++.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 142 -~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 142 -DVNAQEPCNGRTALHLAVDL-QNPDLVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp -CTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred -CCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 5788887 999999999985 678899999987 5789999999999999999999999999999998875
No 48
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.79 E-value=5.2e-19 Score=177.70 Aligned_cols=125 Identities=16% Similarity=0.145 Sum_probs=74.3
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+..|+.++++.|++... .+.+.. +. .|.||||+|++.|+.++|++|+++|+ +
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~---~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 149 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRA---TDLDAR-----MH-DGTTPLILAARLAVEGMLEDLINSHA------------D 149 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTT---SCTTCC-----CT-TCCCHHHHHHHHTCSSHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---CCcccc-----CC-CCCcHHHHHHHcChHHHHHHHHHcCC------------C
Confidence 366666666666666666665321 122211 11 35666666666666666666666665 4
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
+|.++..|.||||+|+.. +..+++++|+++ |++++.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 150 ~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 215 (253)
T 1yyh_A 150 VNAVDDLGKSALHWAAAV-NNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 215 (253)
T ss_dssp TTCBCTTSCBHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 556666666666666664 445566666665 345666666666666666666666666666666554
No 49
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.79 E-value=8.1e-19 Score=170.77 Aligned_cols=126 Identities=15% Similarity=0.139 Sum_probs=111.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|++.|+.++|++|+++|+
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 149 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSH----ADVNAV-----DD-LGKSALHWAAAVNNVDAAVVLLKNGA------------ 149 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTT----CCTTCB-----CT-TSCBHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcC----CCCcCc-----CC-CCCcHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 458999999999999999999953 344322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|+++++.+
T Consensus 150 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 150 NKDMQNNREETPLFLAARE-GSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CCCCcCCCCcCHHHHHHHc-CCHHHHHHHHHc------CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 6789999999999999985 677899999998 5789999999999999999999999999999998876
No 50
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.79 E-value=2e-18 Score=175.19 Aligned_cols=148 Identities=16% Similarity=0.102 Sum_probs=116.2
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCc--
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKY-- 668 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~-- 668 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|+..|+.++|++||++|++....+..+.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~-----~~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 142 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENG----ANINQP-----DN-EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTP 142 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC----CCCCCC-----CC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCH
Confidence 469999999999999999999953 444432 22 589999999999999999999999996421111000
Q ss_pred --------------------C--------------------------CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCC
Q 003109 669 --------------------I--------------------------FPPNLAGPGGITPLHLAACTSDSDDIIDALTND 702 (847)
Q Consensus 669 --------------------l--------------------------~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~ 702 (847)
. ......+..|.||||+||.. |..+++++|+++
T Consensus 143 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~ 221 (299)
T 1s70_B 143 LDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK-GYTEVLKLLIQA 221 (299)
T ss_dssp HHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH-TCHHHHHHHHTT
T ss_pred HHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC-CcHHHHHHHHHc
Confidence 0 01223567899999999986 677899999987
Q ss_pred CCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCccccccC
Q 003109 703 PQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVG 755 (847)
Q Consensus 703 p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~----~~~~v~~~i~ 755 (847)
++++|.+|..|.||||+|+.+|+.+++++|++++++. ..|+--+.+.
T Consensus 222 ------g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 222 ------RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp ------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred ------CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 5789999999999999999999999999999998875 2455555554
No 51
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.79 E-value=3.8e-19 Score=171.03 Aligned_cols=111 Identities=16% Similarity=0.139 Sum_probs=96.0
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+.+|+.++++.||+ . .+++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~----~~~~~~-----d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga----------- 100 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-D----RDVDAV-----DE-NGRTALLFVAGLGSDKCVRLLAEAGA----------- 100 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-T----SCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-c----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 56799999999999999999998 2 334332 22 59999999999999999999999998
Q ss_pred CCCCCCC-CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcC
Q 003109 670 FPPNLAG-PGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKN 730 (847)
Q Consensus 670 ~d~na~d-~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G 730 (847)
++|.++ ..|+||||+|+.. +..+++++|+++ +++++.+|.+|+||||+|+..+
T Consensus 101 -~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 101 -DLDHRDMRGGLTALHMAAGY-VRPEVVEALVEL------GADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp -CTTCCCSSSSCCHHHHHHHT-TCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHHH
T ss_pred -CCCcCCCCCCCCHHHHHHhc-CcHHHHHHHHHc------CCCCcCCCCCCCCHHHHHHHhc
Confidence 578887 8999999999985 678899999987 5789999999999999998763
No 52
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=2.9e-19 Score=175.69 Aligned_cols=128 Identities=5% Similarity=-0.114 Sum_probs=107.8
Q ss_pred hhhHHHHHHHhcCch----hHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCC------HHHHHHHHHcCCC
Q 003109 590 RFKFLLVFSVDRGCC----ALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC------RRMVDLLIHYSLT 659 (847)
Q Consensus 590 R~k~LL~FAvdrGw~----AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~------~eIVeLLL~~GA~ 659 (847)
..++|||+|+.+|+. +++++||+. |++++.. +. .|+||||+|+..++ .+||++||++|+
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~----Gadvn~~-----d~-~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Ga- 105 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINK----GADIKSR-----TK-EGTTLFFPLFQGGGNDITGTTELCKIFLEKGA- 105 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHT----TCCSSCC-----CT-TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTC-
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHC----CCCCCCC-----CC-CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCC-
Confidence 356999999999975 488888885 4555543 22 59999999999987 689999999999
Q ss_pred CCCCCCCCcCCCCCCCCCCCC-hHHHHHHhcCC----cHHHHHHHhC-CCCCCCCCCCCccCCCCCCCHHHHHHHcCCHH
Q 003109 660 SSNDTPQKYIFPPNLAGPGGI-TPLHLAACTSD----SDDIIDALTN-DPQEIGPSSWNSILDASGHSPYSYALMKNNHA 733 (847)
Q Consensus 660 ~~~~s~~~~l~d~na~d~~G~-TPLHlAA~~~g----~e~VveLLL~-~p~~vGagA~vnarD~~G~TPLHyAa~~G~~e 733 (847)
++|++|..|. ||||+|+..+. ..+++++|++ + ||++|++|..|+||||||+..|+.+
T Consensus 106 -----------din~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~------gad~~~~d~~G~TpL~~A~~~~~~~ 168 (186)
T 3t8k_A 106 -----------DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS------GLQLLIKDKWGLTALEFVKRCQKPI 168 (186)
T ss_dssp -----------CSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST------TCCTTCCCTTSCCHHHHHHTTTCHH
T ss_pred -----------CCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc------CCCCcccCCCCCCHHHHHHHcCCHH
Confidence 6799999999 99999998322 2458999998 6 6789999999999999999999999
Q ss_pred HHHHHHHhhccc
Q 003109 734 YNKLVARKLADR 745 (847)
Q Consensus 734 iIeLLl~K~a~~ 745 (847)
++++|++.+.+.
T Consensus 169 ~v~~L~~~~~~~ 180 (186)
T 3t8k_A 169 ALKMMEDYIKKY 180 (186)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999876554
No 53
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.78 E-value=3.1e-18 Score=175.67 Aligned_cols=138 Identities=17% Similarity=0.198 Sum_probs=107.9
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC------
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDT------ 664 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s------ 664 (847)
..++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++|+++|++....+
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHG----ACVNAM-----DL-WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA 160 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcc
Confidence 458999999999999999998853 333322 22 48899999999999999999999888531100
Q ss_pred ----------------------------------------------------C-------C-------------CcCCCC
Q 003109 665 ----------------------------------------------------P-------Q-------------KYIFPP 672 (847)
Q Consensus 665 ----------------------------------------------------~-------~-------------~~l~d~ 672 (847)
. . ....++
T Consensus 161 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 161 VDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240 (351)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT
T ss_pred hHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc
Confidence 0 0 012367
Q ss_pred CCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 673 NLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 673 na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.++..|.||||+|+.. +..+++++|+++ ++++|.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 241 ~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAER-AHNDVMEVLHKH------GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp TCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCcCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 88899999999999985 677899999987 5789999999999999999999999999999988875
No 54
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=2.3e-19 Score=179.95 Aligned_cols=126 Identities=19% Similarity=0.134 Sum_probs=106.5
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.||+.. .+++.. +. .|+||||+|++.|+.+||++||++|+
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga------------ 94 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYEV----DDPSLP-----ND-EGITALHNAVCAGHTEIVKFLVQFGV------------ 94 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTSTT----SSCCCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHHTC------------
T ss_pred hhHHHHHHHHcCCHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 468999999999999999998753 344432 22 58899999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCC-CHHHHH--HHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGH-SPYSYA--LMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~-TPLHyA--a~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|+||||+||.. ++.+++++|+++ +++++.+|..|. ||||+| +.+|+.+++++|+.++++.
T Consensus 95 ~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~ 165 (239)
T 1ycs_B 95 NVNAADSDGWTPLHCAASC-NNVQVCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 165 (239)
T ss_dssp CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHT
T ss_pred CCCccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcc
Confidence 5788999999999999974 677899999987 578899998887 999999 7889999999999988876
No 55
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.78 E-value=3.4e-19 Score=179.50 Aligned_cols=127 Identities=19% Similarity=0.120 Sum_probs=111.4
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
...++||+|+..|+.++++.||+.. .+++.. +. .|+||||+|+..|+.+||++||++|+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga----------- 78 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEM----NDPSQP-----NE-EGITALHNAICGANYSIVDFLITAGA----------- 78 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHS----SCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC-----------
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHCCC-----------
Confidence 3468999999999999999999863 344432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCC-CCCCCHHHHH--HHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILD-ASGHSPYSYA--LMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD-~~G~TPLHyA--a~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+||.. +..+++++|+++ +++++.+| .+|+||||+| +..|+.+++++|++++++.
T Consensus 79 -~~n~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~------ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 79 -NVNSPDSHGWTPLHCAASC-NDTVICMALVQH------GAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM 149 (229)
T ss_dssp -CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHTT------TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT
T ss_pred -CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc
Confidence 6789999999999999985 678899999987 57899997 5999999999 9999999999999998775
No 56
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.78 E-value=2.1e-18 Score=169.41 Aligned_cols=127 Identities=19% Similarity=0.133 Sum_probs=109.6
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. ..+.+.. +. .|.||||+|++.|+.+++++|+++|+
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~---~~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------ 135 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNG---QMDVNCQ-----DD-GGWTPMIWATEYKHVDLVKLLLSKGS------------ 135 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTT---CCCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCC---CCCcccC-----CC-CCCCHHHHHHHcCCHHHHHHHHHCCC------------
Confidence 358999999999999999999853 2333322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 136 ~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 136 DINIRDNEENICLHWAAFS-GCVDIAEILLAA------KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp CTTCCCTTSCCHHHHHHHH-CCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred CCCccCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC
Confidence 5788999999999999986 677899999987 5789999999999999999999999999999988764
No 57
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=1.6e-19 Score=177.60 Aligned_cols=126 Identities=20% Similarity=0.172 Sum_probs=103.6
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCcC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY-SLTSSNDTPQKYI 669 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~-GA~~~~~s~~~~l 669 (847)
..++||+|+.+|+.++++.||+.. .+++.. +. .|+||||+||..|+.++|++||++ |+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~----------- 131 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNR----VGVNGL-----DK-AGSTALYWACHGGHKDIVEMLFTQPNI----------- 131 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHTTSTTC-----------
T ss_pred cccccccccccCcHHHHHHHHhCC----CCcccc-----CC-CCCCHHHHHHHcCCHHHHHHHHcCCCC-----------
Confidence 358999999999999999999853 444432 22 589999999999999999999998 87
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+||.. +..+++++|+++ ||+++.+|.+|+||||+|+..|+.+++++|+.+++.+
T Consensus 132 -~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 132 -ELNQQNKLGDTALHAAAWK-GYADIVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp -CCCCCCTTSCCHHHHHHHH-TCHHHHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred -CccccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 6789999999999999985 678899999997 5789999999999999999999999999999887776
No 58
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.78 E-value=1.6e-18 Score=169.71 Aligned_cols=132 Identities=20% Similarity=0.173 Sum_probs=79.8
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+.+|+.++++.|++.+...+.+++.. +. .|+||||+|+..|+.++|++|+++|+ +
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 71 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-----NN-LRQTPLHLAVITTLPSVVRLLVTAGA------------S 71 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc-----cc-cCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 477777777777777777777655545444433 22 47777777777777777777777776 3
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
++.++..|.||||+|+.. +..+++++|++.... .+.+++.+|..|.||||+|+..|+.+++++|++++.+
T Consensus 72 ~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~~~~~--~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 141 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEH-RSPTCLRALLDSAAP--GTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD 141 (241)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHSCT--TSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred ccccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCC--ccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455555566666666553 444555555554110 0124555555666666666666666666655555443
No 59
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.77 E-value=4.2e-19 Score=177.96 Aligned_cols=125 Identities=19% Similarity=0.108 Sum_probs=87.1
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||.|+..|..++++.|++...+ ++. .. .|.||||+|++.|+.++|++||++|+
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~----~~~------~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~------------ 61 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMR----VKF------NP-LPLALLLDSSLEGEFDLVQRIIYEVD------------ 61 (239)
T ss_dssp -------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS------------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCC----ccc------Cc-hhhHHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 46899999999999999999997543 221 12 37899999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+||.. |+.+++++|+++ ++++|.+|.+|+||||+|+.+|+.+++++|++++++.
T Consensus 62 ~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 62 DPSLPNDEGITALHNAVCA-GHTEIVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129 (239)
T ss_dssp SCCCCCTTSCCHHHHHHHH-TCHHHHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 6789999999999999985 678899999987 5789999999999999999999999999999998876
No 60
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.77 E-value=1.2e-18 Score=175.11 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=107.6
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++||++|+
T Consensus 124 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga------------ 181 (253)
T 1yyh_A 124 GTTPLILAARLAVEGMLEDLINSH----ADVNAV-----DD-LGKSALHWAAAVNNVDAAVVLLKNGA------------ 181 (253)
T ss_dssp CCCHHHHHHHHTCSSHHHHHHHTT----CCTTCB-----CT-TSCBHHHHHHHHTCHHHHHHHHHTTC------------
T ss_pred CCcHHHHHHHcChHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 469999999999999999999953 444432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 742 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~ 742 (847)
++|.++..|.||||+|+.. +..+++++|+++ +|+++.+|..|.||||+|+.+||.+++++|...-
T Consensus 182 ~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 182 NKDMQNNREETPLFLAARE-GSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred CCCCcCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 5789999999999999985 677899999998 5789999999999999999999999999998653
No 61
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.77 E-value=9.8e-19 Score=176.83 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=108.0
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
...++||+|+.+|+.++++.||+ . .+++.. +. .|+||||+|+..|+.++|++||++|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~----~~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga----------- 101 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-D----RDVDAV-----DE-NGRTALLFVAGLGSDKCVRLLAEAGA----------- 101 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-T----CCTTCB-----CT-TSCBHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-C----CCCCCc-----CC-CCCCHHHHHHHCCCHHHHHHHHHcCC-----------
Confidence 46799999999999999999998 3 334322 22 59999999999999999999999998
Q ss_pred CCCCCCC-CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHH----------------HcCCH
Q 003109 670 FPPNLAG-PGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYAL----------------MKNNH 732 (847)
Q Consensus 670 ~d~na~d-~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa----------------~~G~~ 732 (847)
++|.++ ..|+||||+||.. ++.+++++|+++ +|+++.+|..|.||||+|+ ..|+.
T Consensus 102 -~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 102 -DLDHRDMRGGLTALHMAAGY-VRPEVVEALVEL------GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE 173 (244)
T ss_dssp -CTTCCCSSSCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHH
T ss_pred -CCCcCCCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChH
Confidence 578887 8899999999985 778899999998 5789999999999999988 67999
Q ss_pred HHHHHHHHhhcc
Q 003109 733 AYNKLVARKLAD 744 (847)
Q Consensus 733 eiIeLLl~K~a~ 744 (847)
+++++|..+..+
T Consensus 174 ~iv~~L~~~~~~ 185 (244)
T 3ui2_A 174 KVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHEE
T ss_pred HHHHHHHHhccc
Confidence 999999987554
No 62
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=7.8e-19 Score=181.11 Aligned_cols=123 Identities=14% Similarity=0.135 Sum_probs=84.4
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+..|+.++++.|++.. .+++.. +|+||||+|++.|+.++|++||++|+ +
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~--------~g~t~L~~A~~~g~~~~v~~Ll~~ga------------~ 87 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAG----ALKNLL--------ENEFPLHQAATLEDTKIVKILLFSGL------------D 87 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----GGGSCC--------TTCCHHHHHTTSSSCHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHhCC----CCCCCC--------CCCCHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 46777777777777777777753 222211 36777777777777777777777776 4
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCC-CCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASG-HSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G-~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+|.++..|+||||+|+.. +..+++++|+++ +++++.+|..| .||||+|+.+|+.+++++|++++++.
T Consensus 88 ~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 88 DSQFDDKGNTALYYAVDS-GNMQTVKLFVKK------NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHH------CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred CCCcCCCCCcHHHHHHHc-CCHHHHHHHHhc------CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 566777777777777763 556677777766 45677777777 67777777777777777777766543
No 63
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.77 E-value=9.2e-19 Score=184.17 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=112.7
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCC---------c--HHHHhhccCchHHHHHHHcC--CHHHHHHHHHc
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGL---------S--RESLEMLWEIQLLNRAVKMK--CRRMVDLLIHY 656 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~---------s--~~~~~~l~g~TpLH~AV~~g--~~eIVeLLL~~ 656 (847)
...++||+|+..|+.++++.|++.....+.+.+.. . ........|.||||+|+..| +.++|++||++
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ 162 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL 162 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 44689999999999999999999855433222100 0 00001225899999999999 99999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHH
Q 003109 657 SLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNK 736 (847)
Q Consensus 657 GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIe 736 (847)
|+ ++|.+|..|.||||+||.. ++.+++++|+++.... .+.++|.+|..|+||||+|+.+|+.++++
T Consensus 163 ga------------~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 228 (364)
T 3ljn_A 163 GA------------SPTAKDKADETPLMRAMEF-RNREALDLMMDTVPSK-SSLRLDYANKQGNSHLHWAILINWEDVAM 228 (364)
T ss_dssp TC------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHCSCS-SSCCTTCCCTTCCCTTHHHHTTTCHHHHH
T ss_pred CC------------CCcccCCCCCCHHHHHHHc-CCHHHHHHHHhccccc-ccccccccCCCCCcHHHHHHHcCCHHHHH
Confidence 98 6789999999999999985 7788999999872110 01239999999999999999999999999
Q ss_pred HHHHhhccc
Q 003109 737 LVARKLADR 745 (847)
Q Consensus 737 LLl~K~a~~ 745 (847)
+|++++++.
T Consensus 229 ~Ll~~gad~ 237 (364)
T 3ljn_A 229 RFVEMGIDV 237 (364)
T ss_dssp HHHTTTCCT
T ss_pred HHHHcCCCC
Confidence 999998775
No 64
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.77 E-value=2.7e-18 Score=167.93 Aligned_cols=126 Identities=18% Similarity=0.167 Sum_probs=110.1
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|++.|+.++|++|+++|+
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 97 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLG----VPVNDK-----DD-AGWSPLHIAASAGXDEIVKALLVKGA------------ 97 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT----CCSCCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhC----CCCCCc-----CC-CCCCHHHHHHHcCHHHHHHHHHHcCC------------
Confidence 458999999999999999999863 344432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 98 ~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 98 HVNAVNQNGCTPLHYAASK-NRHEIAVMLLEG------GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Confidence 5788899999999999985 677899999987 5679999999999999999999999999999987654
No 65
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1.3e-18 Score=194.08 Aligned_cols=132 Identities=17% Similarity=0.098 Sum_probs=109.7
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 593 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVK---MKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 593 ~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~---~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..||.|+..|+.++++.||+.. .+++...........|+||||+||+ .|+.++|++||++|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g----~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga----------- 198 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANG----QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG----------- 198 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTT----CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC-----------
T ss_pred HHHHHHHhccCHHHHHHHHhhc----ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC-----------
Confidence 6799999999999999999964 3333220000012258999999977 999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccccC
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRN 747 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~~~ 747 (847)
++|++|..|+||||+||.. |+.+++++|+++ ||++|++|.+|+||||+|+.+|+.+++++|++++++...
T Consensus 199 -~vn~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 199 -HLDAKAADGNTALHYAALY-NQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp -CTTCCCSSSCCHHHHHTTT-TCHHHHHHHHHT------CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred -CCCccCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 6799999999999999985 778899999998 678999999999999999999999999999999998743
No 66
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.76 E-value=2.1e-18 Score=168.04 Aligned_cols=128 Identities=17% Similarity=0.095 Sum_probs=108.4
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++...+ ++.... .+. .|+||||+|++.|+.++|++|+++|+. .
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~----~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------~ 98 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMEN--VNLDDY----PDD-SGWTPFHIACSVGNLEVVKSLYDRPLK----------P 98 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTT--CCGGGC----CCT-TSCCHHHHHHHHCCHHHHHHHHSSSSC----------C
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccc--cccccc----CCC-CCCCHHHHHHHcCCHHHHHHHHhCCCC----------c
Confidence 45899999999999999999996422 222210 112 589999999999999999999999842 1
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 742 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~ 742 (847)
+++.++..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 99 ~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 99 DLNKITNQGVTCLHLAVGK-KWFEVSQFLIEN------GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163 (228)
T ss_dssp CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred ccccCCcCCCCHHHHHHHc-CCHhHHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 5788899999999999985 678899999987 5689999999999999999999999999999988
No 67
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.76 E-value=3.1e-18 Score=173.19 Aligned_cols=134 Identities=16% Similarity=0.059 Sum_probs=111.7
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+.+.. . .|.||||+|++.|+.++|++|+++|+
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~------~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 125 (261)
T 2xai_A 69 WHTPLFNACVSGSWDCVNLLLQHG----ASVQPE------S-DLASPIHEAARRGHVECVNSLIAYGG------------ 125 (261)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT----CCSSCS------C-TTCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC----CCCCCC------C-CCCCHHHHHHHcCcHHHHHHHHHcCC------------
Confidence 458999999999999999999863 333211 1 38899999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----c
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----R 746 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~----~ 746 (847)
++|.++..|.||||+|+.. +..+++++|+++ ++++|. |..|.||||+|+.+|+.+++++|++++++. .
T Consensus 126 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~ 197 (261)
T 2xai_A 126 NIDHKISHLGTPLYLACEN-QQRACVKKLLES------GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNA 197 (261)
T ss_dssp CTTCCBTTTBCHHHHHHHT-TCHHHHHHHHHH------TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcCCCCCCCHHHHHHHh-CCHHHHHHHHHc------CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 5788999999999999985 678899999987 467885 899999999999999999999999998876 2
Q ss_pred CCccccccC
Q 003109 747 NGQVTIPVG 755 (847)
Q Consensus 747 ~~~v~~~i~ 755 (847)
+|.--+.+.
T Consensus 198 ~g~tpl~~A 206 (261)
T 2xai_A 198 EGKRPVELV 206 (261)
T ss_dssp TSCCGGGGS
T ss_pred CCCChhhhc
Confidence 455555554
No 68
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=3.8e-18 Score=169.51 Aligned_cols=127 Identities=22% Similarity=0.198 Sum_probs=110.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++|++|+.+|..++++.|++.. .+++.. ....|+||||+|++.|+.++|++|+++|+
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------------ 63 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGG----ANVNFQ-----EEEGGWTPLHNAVQMSREDIVELLLRHGA------------ 63 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CTTTCCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcC----CCcccc-----cCCCCCcHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 468999999999999999999863 333322 12258999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++.++..|.||||+|+.. +..+++++|+++ +++++.+|..|+||||+|+.+|+.+++++|++++++-
T Consensus 64 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 131 (285)
T 1wdy_A 64 DPVLRKKNGATPFLLAAIA-GSVKLLKLFLSK------GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 131 (285)
T ss_dssp CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCcccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc
Confidence 5788999999999999985 677899999987 5679999999999999999999999999999987764
No 69
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.76 E-value=5.5e-18 Score=176.43 Aligned_cols=144 Identities=19% Similarity=0.079 Sum_probs=107.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC----
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQ---- 666 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~---- 666 (847)
..++||.|+.+|+.++|++||+.+ ++++.. +...|+||||+||+.|+.+||++||++|++.......
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~G----advn~~-----~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~ 95 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGG----ANVNFQ-----EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATP 95 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHT----CCTTCC-----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCC----CCCCcc-----CCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCch
Confidence 368999999999999999999964 444422 2225899999999999999999999999964211110
Q ss_pred -----------------CcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCC----CCCCccCCCCCCCHHHH
Q 003109 667 -----------------KYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGP----SSWNSILDASGHSPYSY 725 (847)
Q Consensus 667 -----------------~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGa----gA~vnarD~~G~TPLHy 725 (847)
....++|.+|..|.||||+|+.. +..+++++|+++...+.. ..+.+..+..|.||||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~-~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~ 174 (337)
T 4g8k_A 96 FILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY-GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 174 (337)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHT-TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHH
T ss_pred hHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHc-CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHH
Confidence 12347889999999999999985 677899999987221110 11223456679999999
Q ss_pred HHHcCCHHHHHHHHHh-hcc
Q 003109 726 ALMKNNHAYNKLVARK-LAD 744 (847)
Q Consensus 726 Aa~~G~~eiIeLLl~K-~a~ 744 (847)
|+.+|+.+++++|+++ +++
T Consensus 175 A~~~g~~~~v~~LL~~~gad 194 (337)
T 4g8k_A 175 AAEKGHVEVLKILLDEMGAD 194 (337)
T ss_dssp HHHHTCHHHHHHHHHHSCCC
T ss_pred HHHCCCHHHHHHHHhccCCC
Confidence 9999999999999864 444
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=4.2e-18 Score=169.17 Aligned_cols=129 Identities=18% Similarity=0.173 Sum_probs=111.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC----RRMVDLLIHYSLTSSNDTPQ 666 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~----~eIVeLLL~~GA~~~~~s~~ 666 (847)
..++||+|+.+|+.++++.|++. .+.+++.. +. .|.||||+|+..++ .+|+++|+++|+
T Consensus 148 g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~-----~~-~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~-------- 210 (285)
T 1wdy_A 148 GATALMDAAEKGHVEVLKILLDE---MGADVNAC-----DN-MGRNALIHALLSSDDSDVEAITHLLLDHGA-------- 210 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT---SCCCTTCC-----CT-TSCCHHHHHHHCSCTTTHHHHHHHHHHTTC--------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHh---cCCCCCcc-----CC-CCCCHHHHHHHccccchHHHHHHHHHHcCC--------
Confidence 45899999999999999999985 23444432 22 58999999999999 999999999998
Q ss_pred CcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcccc
Q 003109 667 KYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRR 746 (847)
Q Consensus 667 ~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~~ 746 (847)
++|.++..|.||||+|+.. +..+++++|++.. +++++.+|..|.||||+|+.+|+.+++++|++++++..
T Consensus 211 ----~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~-----g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 211 ----DVNVRGERGKTPLILAVEK-KHLGLVQRLLEQE-----HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp ----CSSCCCTTSCCHHHHHHHT-TCHHHHHHHHHSS-----SCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred ----CCCCcCCCCCcHHHHHHHc-CCHHHHHHHHhcc-----CCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 6789999999999999985 6778999999831 56899999999999999999999999999999998863
No 71
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.76 E-value=1.3e-18 Score=171.87 Aligned_cols=133 Identities=18% Similarity=0.099 Sum_probs=111.7
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..|+.++++.||+. +.+++.. +. .|+||||+|++.|+.++|++|+++|++. .+.
T Consensus 44 ~g~t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~ 107 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIAEALLGA----GCDPELR-----DF-RGNTPLHLACEQGCLASVGVLTQSCTTP------HLH 107 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHCCCSC----CCCSCCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHSTTTT------SSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHc----CCCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHhcccch------hHH
Confidence 346999999999999999999985 3444432 22 5899999999999999999999999731 111
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDA-SGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~-~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
..++..+..|.||||+|+.. +..+++++|+++ +++++.+|. .|.||||+|+..|+.+++++|++++++.
T Consensus 108 ~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 177 (236)
T 1ikn_D 108 SILKATNYNGHTCLHLASIH-GYLGIVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 177 (236)
T ss_dssp CGGGCCCTTCCCHHHHHHHT-TCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS
T ss_pred HHhhccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 13577889999999999985 678899999987 578999998 9999999999999999999999998775
No 72
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.76 E-value=4.1e-18 Score=163.22 Aligned_cols=128 Identities=16% Similarity=0.034 Sum_probs=105.3
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++|++++..
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~----------- 97 (201)
T 3hra_A 39 GNTPLNIAVHNNDIEIAKALIDRG----ADINLQ-----NS-ISDSPYLYAGAQGRTEILAYMLKHATP----------- 97 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHHSCC-----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHhccCc-----------
Confidence 458999999999999999999853 344322 22 488999999999999999999955431
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCC-----HHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNN-----HAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~-----~eiIeLLl~K~a~~ 745 (847)
+++.++..|.||||+|+.. +..+++++|+++ | .++++.+|..|+||||+|+..|+ .+++++|++++++.
T Consensus 98 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~----g-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 98 DLNKHNRYGGNALIPAAEK-GHIDNVKLLLED----G-REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp CTTCCCTTSCCSHHHHHHT-TCHHHHHHHHHH----C-CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred ccccccCCCCcHHHHHHHc-CCHHHHHHHHHc----C-CCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 5788899999999999985 677899999987 2 26789999999999999999988 89999999987764
No 73
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.76 E-value=3.7e-18 Score=175.12 Aligned_cols=127 Identities=21% Similarity=0.184 Sum_probs=111.0
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++|+.|+..|..+.++.||.. .+++.+.. +. .|.||||+|++.|+.++|++||++|+
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~---~~~~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~------------ 82 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTP---LNVNCHAS-----DG-RKSTPLHLAAGYNRVRIVQLLLQHGA------------ 82 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCT---TTTTCCCS-----ST-TCCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred cchhHHHHHHcCCHHHHHHHHHh---cCCCcccC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 36899999999999999998874 23444322 22 48999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.++..|.||||+|+.. |+.+++++|+++ +++++.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 83 ~~~~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 83 DVHAKDKGGLVPLHNACSY-GHYEVTELLLKH------GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCccCCCCCcHHHHHHHC-CCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 6789999999999999985 778899999998 5689999999999999999999999999999998775
No 74
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.76 E-value=4e-19 Score=183.34 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=101.4
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++|++|+..++.++++.|++.. ++++.. +. .|+||||+||+.|+.++|++||++|+
T Consensus 119 g~t~l~~a~~~~~~~~~~~Ll~~g----~~~n~~-----d~-~g~TpL~~A~~~g~~~~v~~Ll~~ga------------ 176 (269)
T 4b93_B 119 QAVPLHLACQQGHFQVVKCLLDSN----AKPNKK-----DL-SGNTPLIYACSGGHHELVALLLQHGA------------ 176 (269)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTT----CCSCCC-----CT-TCCCHHHHHHHTTCGGGHHHHHHTTC------------
T ss_pred CCCccccccccChHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHCCCHHHHHHHHHCCC------------
Confidence 458999999999999999999853 444433 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLV 738 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLL 738 (847)
++|.++..|.||||+||.. |..+++++|+++ ||++|++|.+|+||||||+++|+ ++++|
T Consensus 177 dvn~~~~~g~t~Lh~A~~~-g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 177 SINASNNKGNTALHEAVIE-KHVFVVELLLLH------GASVQVLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp CTTCBCTTSCBHHHHHHHT-TCHHHHHHHHHT------TCCSCCCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred CCCccccCCCcHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHhCCc--HHHHH
Confidence 6799999999999999985 778899999998 57899999999999999998875 55554
No 75
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.75 E-value=8.2e-18 Score=170.06 Aligned_cols=125 Identities=18% Similarity=0.039 Sum_probs=107.3
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++|+++|++
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------- 94 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHG----AQVNGV-----TA-DWHTPLFNACVSGSWDCVNLLLQHGAS----------- 94 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-----------
Confidence 458999999999999999999963 444432 22 589999999999999999999999983
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++. +..|.||||+|+.. +..+++++|+++ +++++.+|.+|.||||+|+.+|+.+++++|++++++.
T Consensus 95 -~~~-~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 160 (261)
T 2xai_A 95 -VQP-ESDLASPIHEAARR-GHVECVNSLIAY------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 160 (261)
T ss_dssp -SSC-SCTTCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred -CCC-CCCCCCHHHHHHHc-CcHHHHHHHHHc------CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 343 44599999999985 678899999988 5689999999999999999999999999999988775
No 76
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.75 E-value=4.9e-18 Score=176.84 Aligned_cols=128 Identities=18% Similarity=0.175 Sum_probs=106.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC----RRMVDLLIHYSLTSSNDTPQ 666 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~----~eIVeLLL~~GA~~~~~s~~ 666 (847)
..++||+|+.+|+.+++++||+. .+++++.. +. .|.|+||.++..++ ..|+++|+++|+
T Consensus 168 g~T~L~~A~~~g~~~~v~~LL~~---~gad~n~~-----d~-~g~t~l~~~~~~~~~~~~~~i~~lLl~~ga-------- 230 (337)
T 4g8k_A 168 GATALMDAAEKGHVEVLKILLDE---MGADVNAC-----DN-MGRNALIHALLSSDDSDVEAITHLLLDHGA-------- 230 (337)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHH---SCCCTTCC-----CT-TSCCHHHHHHHHSCTTTHHHHHHHHHHTTC--------
T ss_pred CCcHHHHHHHCCCHHHHHHHHhc---cCCCcCcc-----CC-CCCcHHHHHHHHcCcccHHHHHHHHHHCCC--------
Confidence 46899999999999999999975 34555433 22 48899998876554 468999999998
Q ss_pred CcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 667 KYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 667 ~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|+||||+||.. +..++++.|+... ++++|.+|.+|+||||+|+++|+.++|++|++++++.
T Consensus 231 ----d~n~~d~~g~t~L~~a~~~-~~~~~v~~Ll~~~-----~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 231 ----DVNVRGERGKTPLILAVEK-KHLGLVQRLLEQE-----HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp ----CTTCCCGGGCCHHHHHHHT-TCHHHHHHHHTST-----TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSS
T ss_pred ----CCCCcCCCCCCHHHHHHHh-hhhHHHHHHHHhc-----CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 6789999999999999985 6677888888752 5789999999999999999999999999999998864
No 77
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=5.3e-18 Score=182.34 Aligned_cols=125 Identities=17% Similarity=0.127 Sum_probs=75.4
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+.+|+.++++.|++.. .+.+.. +. .|.||||+|++.|+.+++++|+++|+ +
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 303 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQ----ANGNLG-----NK-SGLTPLHLVAQEGHVPVADVLIKHGV------------M 303 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTT----CCTTCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHHTC------------C
T ss_pred CCHHHHHHHCCCHHHHHHHHhcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHhCCc------------c
Confidence 35666666666666666666532 222211 11 35666666666666666666666665 4
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+|.++..|.||||+|+.. +..+++++|+++ ++++|.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 304 ~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 304 VDATTRMGYTPLHVASHY-GNIKLVKFLLQH------QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp TTCCCSSCCCHHHHHHHS-SCSHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCCCCCCCHHHHHHHc-CcHHHHHHHHhc------CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 566666666666666664 444566666665 3556666666666666666666666666666666554
No 78
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.75 E-value=3.8e-18 Score=179.52 Aligned_cols=131 Identities=18% Similarity=0.113 Sum_probs=110.1
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCc
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKM---KCRRMVDLLIHYSLTSSNDTPQKY 668 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~---g~~eIVeLLL~~GA~~~~~s~~~~ 668 (847)
..+|+.|+..|....++.||... .+++...........|.||||+||+. |+.++|++||++|+
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g----~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga---------- 217 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANG----QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG---------- 217 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTT----CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS----------
T ss_pred HHHHhhhhhccCHHHHHHHHhcC----CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC----------
Confidence 36799999999999999998743 34432100000122589999999997 99999999999998
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 669 IFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 669 l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+||.. +..+++++|+++ ||+++++|.+|.||||+|+..|+.+++++|++++++.
T Consensus 218 --dvn~~d~~G~TpLh~A~~~-g~~~~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 218 --HLDAKAADGNTALHYAALY-NQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp --CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred --CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 6789999999999999985 678899999997 5789999999999999999999999999999999874
No 79
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.74 E-value=9.7e-18 Score=170.21 Aligned_cols=116 Identities=18% Similarity=0.164 Sum_probs=89.7
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++|++|+..|+.++++.||+.. .+++.. +. .|.||||+||..|+.++|++||++|+
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga------------ 97 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERG----ADINYA-----NV-DGLTALHQACIDDNVDMVKFLVENGA------------ 97 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHC----CCTTCB-----CT-TCCBHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CccHHHHHHHcCCHHHHHHHHHcC----CCCccc-----CC-CCCCHHHHHHHcCCHHHHHHHHHCCC------------
Confidence 368999999999999999999963 344432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHH
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYN 735 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiI 735 (847)
++|.+|..|+||||+|+.. |+.+++++|+++ +++++.+|..|.||||+|+..|+.+++
T Consensus 98 ~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~ 155 (299)
T 1s70_B 98 NINQPDNEGWIPLHAAASC-GYLDIAEYLISQ------GAHVGAVNSEGDTPLDIAEEEAMEELL 155 (299)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHCCSHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHc-CCHHHHHHHHhC------CCCCCCcCCCCCCHHHHHHhcchHHHH
Confidence 5788999999999999985 677899999987 455666665544444444333333333
No 80
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.74 E-value=1.3e-17 Score=163.64 Aligned_cols=126 Identities=20% Similarity=0.162 Sum_probs=93.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 68 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAG----ANIDTC-----SE-DQRTPLMEAAENNHLEAVKYLIKAGA------------ 68 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHTTTC------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcC----CCcCcc-----CC-CCCCHHHHHHHhCCHHHHHHHHhCCC------------
Confidence 468999999999999999999853 344332 12 48899999999999999999999987
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
+++.++..|.||||+|+.. +..+++++|++. | .++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 69 ~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~----~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 136 (237)
T 3b7b_A 69 LVDPKDAEGSTCLHLAAKK-GHYEVVQYLLSN----G-QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD 136 (237)
T ss_dssp CCCCCCTTSCCHHHHHHHT-TCHHHHHHHHTT----T-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCcHHHHHHHc-CCHHHHHHHHhC----C-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 4566677777777777764 556677777766 2 145677777777777777777777777777776654
No 81
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=1.5e-17 Score=171.16 Aligned_cols=124 Identities=17% Similarity=0.051 Sum_probs=106.2
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+.+.. . .|.||||+|++.|+.++|++|+++|+
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~------~-~g~t~L~~A~~~g~~~~v~~Ll~~g~------------ 181 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQHG----ASVQPE------S-DLASPIHEAARRGHVECVNSLIAYGG------------ 181 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTT----CCSSCS------C-TTSCHHHHHHHHTCHHHHHHHHHTTC------------
T ss_pred CCCHHHHHHHcCHHHHHHHHHHCC----CCCCCC------C-CCCCHHHHHHHcCCHHHHHHHHHCCC------------
Confidence 458999999999999999999853 333211 1 38899999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.++..|.||||+|+.. +..+++++|++. ++++|. |..|.||||+|+.+|+.+++++|++++++.
T Consensus 182 ~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 248 (285)
T 3d9h_A 182 NIDHKISHLGTPLYLACEN-QQRACVKKLLES------GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADT 248 (285)
T ss_dssp CTTCCBTTTBCHHHHHHHT-TCHHHHHHHHHT------TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHC------CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 5788999999999999985 678899999987 467774 899999999999999999999999998774
No 82
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.74 E-value=4.2e-18 Score=182.13 Aligned_cols=133 Identities=18% Similarity=0.144 Sum_probs=109.0
Q ss_pred hhhHHHHHHHhcC---chhHHHHHHHHHHhccccCCCCcHHH--HhhccCchHHHHHHHcCCHHHHHHHHHcC-CCCCCC
Q 003109 590 RFKFLLVFSVDRG---CCALVKAILDILVEGNLSMDGLSRES--LEMLWEIQLLNRAVKMKCRRMVDLLIHYS-LTSSND 663 (847)
Q Consensus 590 R~k~LL~FAvdrG---w~AVVK~LLd~l~~g~vdid~~s~~~--~~~l~g~TpLH~AV~~g~~eIVeLLL~~G-A~~~~~ 663 (847)
...++||+|+..| +.+++++|++...+ ++...... .....|.||||+|++.|+.++|++||+++ +
T Consensus 234 ~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~----~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~----- 304 (373)
T 2fo1_E 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAK----VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS----- 304 (373)
T ss_dssp TSCCHHHHHHHSCSTTHHHHHHHHHHHTCC----SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC-----
T ss_pred CCCCHHHHHHHhCCcchHHHHHHHHHCCCC----cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC-----
Confidence 3468999999988 89999999997533 32210000 01125899999999999999999999886 5
Q ss_pred CCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhc
Q 003109 664 TPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLA 743 (847)
Q Consensus 664 s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a 743 (847)
++|.+|..|.||||+||.. |..+++++|+++ ||+++.+|..|.||||+|+.+||.+++++|+++.+
T Consensus 305 -------~~n~~d~~g~TpL~~A~~~-g~~~iv~~Ll~~------gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 305 -------NKDKQDEDGKTPIMLAAQE-GRIEVVMYLIQQ------GASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp -------CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred -------CccCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 6789999999999999985 678899999998 57899999999999999999999999999999887
Q ss_pred cc
Q 003109 744 DR 745 (847)
Q Consensus 744 ~~ 745 (847)
++
T Consensus 371 ~~ 372 (373)
T 2fo1_E 371 ER 372 (373)
T ss_dssp --
T ss_pred cc
Confidence 65
No 83
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.73 E-value=2.5e-17 Score=160.00 Aligned_cols=126 Identities=17% Similarity=0.148 Sum_probs=92.1
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
..++||+|+..|+.++++.|++.. .+.+.. +. .|.||||+|++.|+.+++++|+++|+
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~------------ 133 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYG----ADPSLI-----DG-EGCSCIHLAAQFGHTSIVAYLIAKGQ------------ 133 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCChhHHHHHcCCHHHHHHHHHcC----CCCccc-----CC-CCCCHHHHHHHcCHHHHHHHHHhcCC------------
Confidence 458999999999999999999853 333322 22 48899999999999999999999988
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDA-SGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~-~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
+++.++..|.||||+|+..++..+++++|+.. +++++.++. .|.||||+|+.+|+.+++++|++++++
T Consensus 134 ~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 202 (240)
T 3eu9_A 134 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF------NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN 202 (240)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT------TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred CccccCCCCCcHHHHHHHhCChHHHHHHHHhc------CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 45666677777777777555555666766665 345666665 677777777777777777777766555
No 84
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.73 E-value=1.5e-17 Score=149.42 Aligned_cols=94 Identities=22% Similarity=0.110 Sum_probs=86.0
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|.|+||+|++.|+.++|++|+++|+ ++|.++..|+||||+||.. +..+++++|+++ ++++
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~------------~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~ 66 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGE------------DVNRTLEGGRKPLHYAADC-GQLEILEFLLLK------GADI 66 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTC------------CTTSCCTTSSCHHHHHHHT-TCHHHHHHHHTT------TCCT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCC------------CcCccCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCC
Confidence 37899999999999999999999998 5788999999999999985 677899999987 5789
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 67 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 67 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADK 99 (123)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999987764
No 85
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.73 E-value=3.3e-17 Score=168.72 Aligned_cols=125 Identities=18% Similarity=0.039 Sum_probs=106.9
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++|+++|++
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------- 150 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHG----AQVNGV-----TA-DWHTPLFNACVSGSWDCVNLLLQHGAS----------- 150 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT----CCSSCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHTTCC-----------
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHcCHHHHHHHHHHCCCC-----------
Confidence 469999999999999999999963 444422 22 589999999999999999999999983
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++. +..|.||||+|+.. +..+++++|+++ +++++.+|.+|.||||+|+.+|+.+++++|++++++.
T Consensus 151 -~~~-~~~g~t~L~~A~~~-g~~~~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 216 (285)
T 3d9h_A 151 -VQP-ESDLASPIHEAARR-GHVECVNSLIAY------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 216 (285)
T ss_dssp -SSC-SCTTSCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred -CCC-CCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC
Confidence 343 33599999999986 677899999987 5689999999999999999999999999999987764
No 86
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.73 E-value=2e-17 Score=180.28 Aligned_cols=127 Identities=15% Similarity=0.083 Sum_probs=109.2
Q ss_pred hHHHHHHHhc-CchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 592 KFLLVFSVDR-GCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 592 k~LL~FAvdr-Gw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.++||+|+.. |+.++++.||+.. ++++.... ...|.||||+||..|+.++|++||++|+
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~G----advn~~~~----~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga------------ 259 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHG----ADVNWVNG----GQDNATPLIQATAANSLLACEFLLQNGA------------ 259 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTT----CCTTCCCT----TTTCCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcC----CCCCcccc----ccCCCCHHHHHHHCCCHHHHHHHHHcCC------------
Confidence 4799999999 9999999999853 44443310 1258999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
++|.+|..|.||||+|+.. ++.+++++|+++ +|+++++|.+|.||||+|+..|+.+++++|+......
T Consensus 260 dvn~~d~~G~TpLh~A~~~-g~~~~v~~LL~~------Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 260 NVNQADSAGRGPLHHATIL-GHTGLACLFLKR------GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMRE 327 (368)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred CCCCCCCCCCCHHHHHHHc-CcHHHHHHHHHC------cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 6789999999999999986 678899999998 5789999999999999999999999999999876443
No 87
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.72 E-value=1.9e-17 Score=178.02 Aligned_cols=126 Identities=16% Similarity=0.163 Sum_probs=110.3
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..|+.++++.|++.. ++++.. +. .|+||||+|++.|+.++|++|+++|+
T Consensus 277 ~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga----------- 335 (437)
T 1n11_A 277 SGLTPLHLVAQEGHVPVADVLIKHG----VMVDAT-----TR-MGYTPLHVASHYGNIKLVKFLLQHQA----------- 335 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHT----CCTTCC-----CS-SCCCHHHHHHHSSCSHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCC----ccCCCC-----CC-CCCCHHHHHHHcCcHHHHHHHHhcCC-----------
Confidence 3468999999999999999999964 344422 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 744 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~ 744 (847)
++|.++..|.||||+|+.. ++.+++++|+++ ||+++.+|.+|.||||+|+.+|+.+++++|......
T Consensus 336 -d~n~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~------ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~~ 402 (437)
T 1n11_A 336 -DVNAKTKLGYSPLHQAAQQ-GHTDIVTLLLKN------GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE 402 (437)
T ss_dssp -CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCC
T ss_pred -CCCCCCCCCCCHHHHHHHC-ChHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcccc
Confidence 6799999999999999985 778899999998 578999999999999999999999999999765544
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.72 E-value=1.7e-17 Score=151.48 Aligned_cols=94 Identities=22% Similarity=0.189 Sum_probs=87.0
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|+||||+|++.|+.++|++||++|+ ++|.+|..|.||||+|+.. +..+++++|+++ ++++
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~ 69 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGS------------DPNVKDHAGWTPLHEACNH-GHLKVVELLLQH------KALV 69 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTC------------CSCCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC------------CCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCcc
Confidence 58999999999999999999999998 5788999999999999985 678899999987 5689
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+.+|..|+||||+|+..|+.+++++|++++++.
T Consensus 70 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 70 NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp TCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999988775
No 89
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.71 E-value=1.1e-17 Score=148.25 Aligned_cols=94 Identities=27% Similarity=0.226 Sum_probs=87.0
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|+||||+|++.|+.+++++|+++|+ ++|.+|..|.||||+|+.. +..+++++|+++ ++++
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~~~~~d~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~ 68 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGA------------DVNARSKDGNTPLHLAAKN-GHAEIVKLLLAK------GADV 68 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTC------------CSSCCCSSSCCTTHHHHTT-TCHHHHHHHTTT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC------------CCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHc------CCCC
Confidence 58999999999999999999999998 5788999999999999985 678899999987 5689
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+.+|..|+||||+|+..|+.+++++|++++++-
T Consensus 69 ~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 69 NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999998875
No 90
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.71 E-value=6.3e-18 Score=177.92 Aligned_cols=135 Identities=16% Similarity=-0.016 Sum_probs=108.3
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC---RRMVDLLIHYSLTSSNDTPQ 666 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~---~eIVeLLL~~GA~~~~~s~~ 666 (847)
..++|||+|+..|+.+++++||+.. ++++.. +. .|+||||+|+++|+ .++++.||+++..
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~~Ll~~G----ad~n~~-----d~-~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~------- 192 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVKHLVKHG----SNRLYG-----DN-MGESCLVKAVKSVNNYDSGTFEALLDYLYP------- 192 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTT----CCTTBC-----CT-TCCCHHHHHHHSSHHHHTTCHHHHHHHHGG-------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHhcccccHHHHHHHHHhhhc-------
Confidence 3569999999999999999999963 444433 22 59999999999998 7889999998731
Q ss_pred CcCCCCCCCCCCCChHHHHHHhc---CCcHHHHHHHhCCCCCC----------------CCC------------------
Q 003109 667 KYIFPPNLAGPGGITPLHLAACT---SDSDDIIDALTNDPQEI----------------GPS------------------ 709 (847)
Q Consensus 667 ~~l~d~na~d~~G~TPLHlAA~~---~g~e~VveLLL~~p~~v----------------Gag------------------ 709 (847)
++|.+|..|+||||+||.. .+..+++++|++....+ |+.
T Consensus 193 ----~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~ 268 (327)
T 1sw6_A 193 ----CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 268 (327)
T ss_dssp ----GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSH
T ss_pred ----cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHH
Confidence 5789999999999999972 36778999887641000 000
Q ss_pred -----CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 710 -----SWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 710 -----A~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
.++|.+|.+|+||||+|+++|+.+++++|++++++.
T Consensus 269 ~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 269 KWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 309 (327)
T ss_dssp HHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT
T ss_pred HHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 048899999999999999999999999999998875
No 91
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.71 E-value=1.4e-17 Score=171.69 Aligned_cols=124 Identities=11% Similarity=-0.004 Sum_probs=93.2
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccC-chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWE-IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g-~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
.+++||+|+..|+.++++.|++... +++.. +. .| .||||+|+..|+.++|++|+++|++
T Consensus 95 g~t~L~~A~~~g~~~~v~~Ll~~ga----~~~~~-----~~-~g~~t~L~~A~~~~~~~~v~~Ll~~g~~---------- 154 (285)
T 3kea_A 95 GNTALYYAVDSGNMQTVKLFVKKNW----RLMFY-----GK-TGWKTSFYHAVMLNDVSIVSYFLSEIPS---------- 154 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCG----GGGGC-----SS-SGGGSHHHHHHHTTCHHHHHHHHTTSCT----------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCC----CCCcc-----CC-CCCCCHHHHHHHcCCHHHHHHHHhCCCc----------
Confidence 3578888888888888888888632 22211 22 34 6888888888888888888888763
Q ss_pred CCCCCCCC-CCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCH-HHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGP-GGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSP-YSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~-~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TP-LHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
..+. .|.||||+|+.. +..+++++|+++ |+++|.+|..|+|| ||+|+.+|+.+++++|++++++.
T Consensus 155 ----~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~ 221 (285)
T 3kea_A 155 ----TFDLAILLSCIHITIKN-GHVDMMILLLDY------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINI 221 (285)
T ss_dssp ----TCCCSTHHHHHHHHHHT-TCHHHHHHHHHH------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCS
T ss_pred ----cccccCCccHHHHHHHc-ChHHHHHHHHHc------CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 1222 788888888874 667788888877 56788888888887 88888888888888888887776
No 92
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.71 E-value=6.2e-17 Score=157.20 Aligned_cols=126 Identities=15% Similarity=0.108 Sum_probs=106.4
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCcC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC-RRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~-~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..++||+|+.+|+.++++.|++.. .+++.. +. .|.||||+|+..++ .+++++|+++|+
T Consensus 109 g~t~l~~A~~~~~~~~~~~Ll~~~----~~~~~~-----~~-~g~t~l~~a~~~~~~~~~~~~L~~~~~----------- 167 (240)
T 3eu9_A 109 GCSCIHLAAQFGHTSIVAYLIAKG----QDVDMM-----DQ-NGMTPLMWAAYRTHSVDPTRLLLTFNV----------- 167 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHHCCSSTTHHHHHHTTC-----------
T ss_pred CCCHHHHHHHcCHHHHHHHHHhcC----CCcccc-----CC-CCCcHHHHHHHhCChHHHHHHHHhcCC-----------
Confidence 358999999999999999999953 344322 22 58999999997666 899999999998
Q ss_pred CCCCCCCC-CCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNLAGP-GGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na~d~-~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++..+. .|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|+++++++
T Consensus 168 -~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 168 -SVNLGDKYHKNTALHWAVLA-GNTTVISLLLEA------GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp -CTTCCCTTTCCCHHHHHHHH-TCHHHHHHHHHH------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred -CcchhhccCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 5677776 899999999986 667899999988 5789999999999999999999999999999988775
No 93
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.71 E-value=1.3e-17 Score=152.73 Aligned_cols=93 Identities=16% Similarity=0.032 Sum_probs=86.0
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|.||||+|++.|+.++|++||++|+ ++|.++..|+||||+|+. +..+++++|+++ ++++
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~------g~~~ 70 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGA------------DPNALNRFGRRPIQVMMM--GSAQVAELLLLH------GAEP 70 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTC------------CTTCCCTTCCTTTTTSTT--SCHHHHHHHHHH------TCCS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCC------------CcCCcCCCCCCHHHHHHc--CCHHHHHHHHHC------CCCC
Confidence 58999999999999999999999998 578899999999999998 677899999987 5789
Q ss_pred ccCCCC-CCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDAS-GHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~-G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+.+|.. |+||||+|+.+|+.+++++|++++++.
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999 999999999999999999999987663
No 94
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.71 E-value=7.3e-18 Score=165.74 Aligned_cols=124 Identities=8% Similarity=-0.021 Sum_probs=102.8
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCc
Q 003109 593 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCR----RMVDLLIHYSLTSSNDTPQKY 668 (847)
Q Consensus 593 ~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~----eIVeLLL~~GA~~~~~s~~~~ 668 (847)
..|+.|+..|..+.++.++... .+. .+...|+||||+|+.+|+. +||++||++||
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~------~~~-----~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga---------- 66 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG------YED-----KESVLKSNILYDVLRNNNDEARYKISMFLINKGA---------- 66 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS------SSC-----HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC----------
T ss_pred cHHHHHHHcCCHHHHHHHHhcC------ccc-----ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCC----------
Confidence 5688999999999999888742 121 1212599999999999985 59999999999
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCc-----HHHHHHHhCCCCCCCCCCCCccCCCCCC-CHHHHHHHcC-----CHHHHHH
Q 003109 669 IFPPNLAGPGGITPLHLAACTSDS-----DDIIDALTNDPQEIGPSSWNSILDASGH-SPYSYALMKN-----NHAYNKL 737 (847)
Q Consensus 669 l~d~na~d~~G~TPLHlAA~~~g~-----e~VveLLL~~p~~vGagA~vnarD~~G~-TPLHyAa~~G-----~~eiIeL 737 (847)
++|.+|..|+||||+|+..+.. .+++++|+++ ||++|++|..|. ||||||+..| +.+++++
T Consensus 67 --dvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~ 138 (186)
T 3t8k_A 67 --DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKL 138 (186)
T ss_dssp --CSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHH
T ss_pred --CCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHH
Confidence 6899999999999999986532 4689999998 678999999999 9999999954 4568899
Q ss_pred HHH-hhccc
Q 003109 738 VAR-KLADR 745 (847)
Q Consensus 738 Ll~-K~a~~ 745 (847)
|++ ++++.
T Consensus 139 Ll~~~gad~ 147 (186)
T 3t8k_A 139 IFSQSGLQL 147 (186)
T ss_dssp HHTSTTCCT
T ss_pred HHHhcCCCC
Confidence 998 87775
No 95
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.70 E-value=4.1e-17 Score=149.35 Aligned_cols=94 Identities=21% Similarity=0.207 Sum_probs=86.2
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.+.||||+||+.|+.++|++|+++|+ ++|.+|..|.||||+|+.. +..+++++|+++ ++++
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~ 73 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGA------------DVNAKDEYGLTPLYLATAH-GHLEIVEVLLKN------GADV 73 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCC------------CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCC
Confidence 47899999999999999999999998 5788999999999999986 667899999987 5689
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 74 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 106 (136)
T 2jab_A 74 NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV 106 (136)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999987653
No 96
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.70 E-value=4.1e-17 Score=167.81 Aligned_cols=138 Identities=15% Similarity=0.068 Sum_probs=107.7
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCC----
Q 003109 593 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSL-TSSNDTPQK---- 667 (847)
Q Consensus 593 ~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA-~~~~~s~~~---- 667 (847)
.++|.|+.+|+.+.++.|+..+.+..++.. +. .|+||||+|++.|+.++|++||++|+ +....+..+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~-------d~-~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 149 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIA-------DS-NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPI 149 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCC-------CT-TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCC-------CC-CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHH
Confidence 566788888888888888887655332221 22 59999999999999999999999998 432111110
Q ss_pred ----------------------cCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHH
Q 003109 668 ----------------------YIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSY 725 (847)
Q Consensus 668 ----------------------~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHy 725 (847)
...+++..+..|.||||+||.. |..+++++|+++ ||++|.+|.+|+||||+
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~-g~~~~v~~Ll~~------gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSH-GRVDVVKALLAC------EADVNVQDDDGSTALMC 222 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHhC------CCCCCCCCCCCCCHHHH
Confidence 0124567788899999999985 678899999987 57899999999999999
Q ss_pred HHHcCCHHHHHHHHH-hhccc
Q 003109 726 ALMKNNHAYNKLVAR-KLADR 745 (847)
Q Consensus 726 Aa~~G~~eiIeLLl~-K~a~~ 745 (847)
|+.+|+.+++++|++ ++++.
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCT
T ss_pred HHHCCCHHHHHHHHhcCCCCC
Confidence 999999999999998 66553
No 97
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.70 E-value=3.2e-17 Score=175.29 Aligned_cols=134 Identities=17% Similarity=0.160 Sum_probs=112.9
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHH----HHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDI----LVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP 665 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~----l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~ 665 (847)
..+++||+|+.+|+.++++.|+.. +.+.+++++.. +. .|.||||+|+..|+.+||++||++|+
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~-----d~-~g~TpL~~A~~~g~~~iv~~Ll~~ga------- 190 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM-----DC-DENTPLMLAVLARRRRLVAYLMKAGA------- 190 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC-------
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC-----CC-CCCCHHHHHHHcChHHHHHHHHHCCC-------
Confidence 356999999999999999988752 33455565543 22 58999999999999999999999998
Q ss_pred CCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcC---CHHHHHHHHHhh
Q 003109 666 QKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKN---NHAYNKLVARKL 742 (847)
Q Consensus 666 ~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G---~~eiIeLLl~K~ 742 (847)
+++.++..|.||||+|+.. +..+++++|+++.. .+++++.+|.+|.||||+|+..| +.+++++|++++
T Consensus 191 -----~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~~~---~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g 261 (373)
T 2fo1_E 191 -----DPTIYNKSERSALHQAAAN-RDFGMMVYMLNSTK---LKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKG 261 (373)
T ss_dssp -----CSCCCCTTCCCHHHHHHHT-TCHHHHHHHTTSHH---HHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHT
T ss_pred -----CCcccCCCCCCHHHHHHHC-CCHHHHHHHHhcCc---cccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCC
Confidence 5788999999999999985 67889999998720 12578999999999999999998 899999999998
Q ss_pred ccc
Q 003109 743 ADR 745 (847)
Q Consensus 743 a~~ 745 (847)
++.
T Consensus 262 ~~~ 264 (373)
T 2fo1_E 262 AKV 264 (373)
T ss_dssp CCS
T ss_pred CCc
Confidence 775
No 98
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=7.9e-17 Score=143.58 Aligned_cols=87 Identities=18% Similarity=0.194 Sum_probs=80.8
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|.|+||+|+..|+.++|++|+++|+ ++|.+|..|.||||+||.. +..+++++|+++ ++++
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~i~~~d~~g~tpLh~A~~~-~~~~~v~~Ll~~------ga~~ 83 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGA------------DVAAKDKNGSTPLHLAARN-GHLEVVKLLLEA------GADV 83 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCC------------CCCccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCc
Confidence 58899999999999999999999998 5788999999999999985 678899999987 5789
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHH
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLV 738 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLL 738 (847)
+.+|..|+||||+|+.+|+.+++++|
T Consensus 84 ~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 84 XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999987
No 99
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.67 E-value=2e-16 Score=139.53 Aligned_cols=94 Identities=24% Similarity=0.227 Sum_probs=85.4
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
+|+||||+|++.|+.++|++|+++|+ +++..+..|.||||+|+.. +..+++++|+++ ++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~------------~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~ 61 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA------------DVNAKDKNGRTPLHLAARN-GHLEVVKLLLEA------GADV 61 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC------------CCCCcCCCCCcHHHHHHHc-CcHHHHHHHHHc------CCCC
Confidence 38899999999999999999999998 5688899999999999985 677899999987 5678
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+.+|..|.||||+|+..|+.+++++|++++.+.
T Consensus 62 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 94 (126)
T 1n0r_A 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 94 (126)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 999999999999999999999999999987653
No 100
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=159.87 Aligned_cols=94 Identities=22% Similarity=0.194 Sum_probs=87.1
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.+.||||+|++.|+.++|++||++|+ ++|.+|..|+||||+||.. +..+++++|++. ++++
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~------ga~~ 80 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMN------------DPSQPNEEGITALHNAICG-ANYSIVDFLITA------GANV 80 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSS------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCT
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCC------------CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCC
Confidence 57899999999999999999999998 5789999999999999985 678899999987 5789
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.+|..|+||||+|+.+|+.+++++|++++++-
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 113 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 999999999999999999999999999988765
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.66 E-value=2.6e-16 Score=154.74 Aligned_cols=95 Identities=19% Similarity=0.077 Sum_probs=87.1
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|.||||+|++.|+.++|++||++|+ ++|.+|..|+||||+||.. ++.+++++|++.. ++++
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~-----g~~~ 133 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRV------------GVNGLDKAGSTALYWACHG-GHKDIVEMLFTQP-----NIEL 133 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHTTST-----TCCC
T ss_pred ccccccccccccCcHHHHHHHHhCCC------------CccccCCCCCCHHHHHHHc-CCHHHHHHHHcCC-----CCCc
Confidence 48899999999999999999999998 5788999999999999985 6788999999862 5689
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.+|..|+||||+|+.+|+.+++++|++++++.
T Consensus 134 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 134 NQQNKLGDTALHAAAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999998875
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.64 E-value=3.2e-16 Score=150.66 Aligned_cols=93 Identities=15% Similarity=0.013 Sum_probs=85.2
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|.||||+|++.|+.++|++||+ |+ ++|.+|..|+||||+|+.. ++.+++++|+++ ++++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~------------~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~ 102 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DR------------DVDAVDENGRTALLFVAGL-GSDKCVRLLAEA------GADL 102 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TS------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cC------------CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCC
Confidence 48899999999999999999999 77 6789999999999999986 677899999988 5789
Q ss_pred ccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILD-ASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD-~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.+| .+|+||||+|+.+|+.+++++|++++++.
T Consensus 103 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 103 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 136 (183)
T ss_dssp TCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred CcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Confidence 9998 89999999999999999999999988764
No 103
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.63 E-value=3.5e-16 Score=146.33 Aligned_cols=93 Identities=16% Similarity=0.071 Sum_probs=85.4
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|.||||+|++.|+.++|++||++|+ ++|.++..|.||||+|+ .+..+++++|+++ ++++
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~--~~~~~~v~~Ll~~------g~~~ 70 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGA------------NPNAPNSYGRRPIQVMM--MGSARVAELLLLH------GAEP 70 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTC------------CTTCCCSSSCCTTTSSC--TTCHHHHHHHHTT------TCCC
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCC------------CCCCCCCCCCCHHHHHH--cCCHHHHHHHHHc------CCCC
Confidence 58899999999999999999999998 57889999999999984 4778899999987 5789
Q ss_pred ccCCCCCCC-HHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILDASGHS-PYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD~~G~T-PLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.+|..|+| |||+|+.+|+.+++++|++++++.
T Consensus 71 ~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~ 104 (156)
T 1bi7_B 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (156)
T ss_dssp CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 999999999 999999999999999999987764
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.61 E-value=3.1e-16 Score=165.05 Aligned_cols=126 Identities=13% Similarity=-0.006 Sum_probs=95.8
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCC
Q 003109 593 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 672 (847)
Q Consensus 593 ~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~ 672 (847)
.++|.|+..+..++++.|++ .+++++.. .+. .|+||||+||+.|+.+||++||++|+ ++
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~----~g~dvn~~----~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Ga------------d~ 157 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPN----TQLNLNIP----VDE-HGNTPLHWLTSIANLELVKHLVKHGS------------NR 157 (327)
T ss_dssp -----CHHHHHHHHHHHCTT----SCCCSCSC----CST-TCCCHHHHHHHTTCHHHHHHHHHTTC------------CT
T ss_pred chhHHHHHhhHHHHHHHHHh----cCCCcccc----cCC-CCCcHHHHHHHcCCHHHHHHHHHcCC------------CC
Confidence 34577777776777777666 34555531 022 59999999999999999999999998 67
Q ss_pred CCCCCCCChHHHHHHhcCCc---HHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHH----cCCHHHHHHHHHhhccc
Q 003109 673 NLAGPGGITPLHLAACTSDS---DDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALM----KNNHAYNKLVARKLADR 745 (847)
Q Consensus 673 na~d~~G~TPLHlAA~~~g~---e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~----~G~~eiIeLLl~K~a~~ 745 (847)
|.+|..|+||||+|+.. ++ .+++..|++. + .++++.+|..|+||||+|++ .|+.+++++|++++..-
T Consensus 158 n~~d~~g~TpLh~A~~~-g~~~~~~~~~~ll~~----~-~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~ 231 (327)
T 1sw6_A 158 LYGDNMGESCLVKAVKS-VNNYDSGTFEALLDY----L-YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 231 (327)
T ss_dssp TBCCTTCCCHHHHHHHS-SHHHHTTCHHHHHHH----H-GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHh-cccccHHHHHHHHHh----h-hccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence 99999999999999985 44 2455555554 1 24689999999999999999 99999999999886543
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.61 E-value=6.9e-16 Score=155.98 Aligned_cols=93 Identities=15% Similarity=0.013 Sum_probs=85.5
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 003109 633 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 712 (847)
Q Consensus 633 ~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~v 712 (847)
.|.||||+|++.|+.++|++||+ |+ ++|.+|..|+||||+||.. |+.+++++|+++ ++++
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~------------~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~ 103 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DR------------DVDAVDENGRTALLFVAGL-GSDKCVRLLAEA------GADL 103 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TC------------CTTCBCTTSCBHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CC------------CCCCcCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCC
Confidence 48899999999999999999999 87 6789999999999999986 677899999998 5789
Q ss_pred ccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 713 SILD-ASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 713 narD-~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
|.+| ..|+||||+|+.+|+.+++++|++++++.
T Consensus 104 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 104 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999 88999999999999999999999998775
No 106
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.59 E-value=1.3e-16 Score=174.37 Aligned_cols=130 Identities=11% Similarity=0.130 Sum_probs=100.8
Q ss_pred hhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 003109 591 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 670 (847)
Q Consensus 591 ~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~ 670 (847)
.+++||+|+..|+.++++.|++...... ..+ ..+. .|.||||+|+++|+.+||++|+++|++..
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~-~~~-----~~~~-~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~--------- 155 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDE-IVK-----VIQA-ENYQAFRLAAENGHLHVLNRLCELAPTEI--------- 155 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCS-SCC-------CH-HHHHHHHHHHHTTCHHHHHHHHHSCTTTH---------
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHH-HHH-----Hhcc-CCCCHHHHHHHcCCHHHHHHHHhCCCCcc---------
Confidence 3599999999999999999998643110 000 1122 36799999999999999999999997310
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcc--CCCCCCCHHHHHH-HcCCHHHHHHHHHhhcc
Q 003109 671 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSI--LDASGHSPYSYAL-MKNNHAYNKLVARKLAD 744 (847)
Q Consensus 671 d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vna--rD~~G~TPLHyAa-~~G~~eiIeLLl~K~a~ 744 (847)
.++..+.+ .||||+||. .|+.+++++|+++ +++++. +|.+|.||||+|+ .+||.+++++|++++++
T Consensus 156 ~~~i~~~~-~TpLh~Aa~-~G~~eiv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 156 MAMIQAEN-YHAFRLAAE-NGHLHVLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHSHHH-HHHHHHHHH-TTCHHHHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred ccccCCCC-CCHHHHHHH-CCCHHHHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 01233333 999999998 4788899999998 567777 8999999999999 99999999999987654
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.56 E-value=1.5e-15 Score=134.52 Aligned_cols=105 Identities=19% Similarity=0.091 Sum_probs=88.5
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..|..++++.|++.. ++++.. +. .|.||||+|+..|+.++|++|+++|+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~-----d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~----------- 66 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKG----ADVNAR-----SK-DGNTPLHLAAKNGHAEIVKLLLAKGA----------- 66 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTT----CCSSCC-----CS-SSCCTTHHHHTTTCHHHHHHHTTTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCcHHHHHHHHHcCC-----------
Confidence 4468999999999999999999853 444432 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHH
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPY 723 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPL 723 (847)
+++.+|..|.||||+|+.. +..+++++|+++ ||++|.++..|.||-
T Consensus 67 -~~~~~d~~g~tpl~~A~~~-~~~~~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 -DVNARSKDGNTPEHLAKKN-GHHEIVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp -CTTCCCTTCCCTTHHHHTT-TCHHHHHHHHTT------SSSHHHHSCCCC---
T ss_pred -CCcccCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCCCcCCccccccc
Confidence 5788999999999999985 678899999998 678999999999984
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.56 E-value=1.3e-14 Score=124.71 Aligned_cols=88 Identities=23% Similarity=0.253 Sum_probs=76.8
Q ss_pred hHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 003109 592 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 671 (847)
Q Consensus 592 k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d 671 (847)
+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|++.|+.++|++|+++|+ +
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~n~~-----d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga------------~ 60 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAG----ADVNAK-----DK-NGRTPLHLAARNGHLEVVKLLLEAGA------------D 60 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CcHHHHHHHcCCHHHHHHHHHcC----CCCccc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 58999999999999999999853 444433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCC
Q 003109 672 PNLAGPGGITPLHLAACTSDSDDIIDALTND 702 (847)
Q Consensus 672 ~na~d~~G~TPLHlAA~~~g~e~VveLLL~~ 702 (847)
+|.+|..|.||||+|+.. +..+++++|+++
T Consensus 61 ~~~~d~~g~t~l~~A~~~-~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 61 VNAKDKNGRTPLHLAARN-GHLEVVKLLLEA 90 (93)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT
T ss_pred CCccCCCCCCHHHHHHHc-CCHHHHHHHHHc
Confidence 789999999999999985 678899999987
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.54 E-value=2.8e-15 Score=157.69 Aligned_cols=108 Identities=15% Similarity=0.037 Sum_probs=84.8
Q ss_pred hhhHHHHHHHhc---CchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 003109 590 RFKFLLVFSVDR---GCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQ 666 (847)
Q Consensus 590 R~k~LL~FAvdr---Gw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~ 666 (847)
..+++||+|+.. |..+++++||+.. .+++.. +. .|+||||+|++.|+.+||++||++|+
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g----advn~~-----d~-~G~TpLh~A~~~g~~~~v~~Ll~~ga-------- 250 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPLVDFIIQNG----GHLDAK-----AA-DGNTALHYAALYNQPDCLKLLLKGRA-------- 250 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHHHHHHHHHS----SCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHHTTC--------
T ss_pred CCccHHHHHHHhcccCcHHHHHHHHhcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC--------
Confidence 346999999986 8999999999974 344433 22 59999999999999999999999998
Q ss_pred CcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCH
Q 003109 667 KYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNH 732 (847)
Q Consensus 667 ~~l~d~na~d~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~ 732 (847)
++|++|..|.||||+|+.. +..+++++|+++ +++ .|.||||+|+..|+.
T Consensus 251 ----d~~~~d~~G~TpL~~A~~~-~~~~iv~~Ll~~------ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 251 ----LVGTVNEAGETALDIARKK-HHKECEELLEQA------QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ----CCSCCCTTSCCHHHHHHHH-TCHHHHHHHHHH------HHH------TTSSCCC--------
T ss_pred ----CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHh------cCC------CCCChhHHHHhcCCc
Confidence 6789999999999999985 677899999987 322 689999999999874
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.50 E-value=1.6e-15 Score=165.74 Aligned_cols=122 Identities=8% Similarity=0.014 Sum_probs=99.5
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
+.+++||+|+.+|+.++|++|++... +.. .......+ .||||+|++.|+.+||++|+++|+
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~ga----d~~---~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga----------- 187 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAP----TEI---MAMIQAEN-YHAFRLAAENGHLHVLNRLCELAP----------- 187 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCT----TTH---HHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCG-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCC----Ccc---ccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCC-----------
Confidence 44689999999999999999998531 110 00111212 799999999999999999999998
Q ss_pred CCCCC--CCCCCChHHHHHH-hcCCcHHHHHHHhCCCCCCCCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 670 FPPNL--AGPGGITPLHLAA-CTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 670 ~d~na--~d~~G~TPLHlAA-~~~g~e~VveLLL~~p~~vGagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+++. .|..|.||||+|| . .|+.+|+++|+++ | + .|.||||+|+.+|+.+++++|++++++.
T Consensus 188 -~~~~~~~d~~g~TpL~~Aa~~-~G~~eiv~~Ll~~----g--a-------~~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 188 -TEATAMIQAENYYAFRWAAVG-RGHHNVINFLLDC----P--V-------MLAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp -GGHHHHHHHHHHHHHHHHHST-TCCHHHHHHHTTS----H--H-------HHHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred -ccchhccCCCCCCHHHHHHHH-CCCHHHHHHHHhC----C--C-------ccchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 3455 7788999999999 7 5788899999986 2 2 2899999999999999999999998765
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.46 E-value=8.4e-14 Score=151.83 Aligned_cols=95 Identities=20% Similarity=0.126 Sum_probs=86.2
Q ss_pred ccCchHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCC--CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCC
Q 003109 632 LWEIQLLNRAVKM-KCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAG--PGGITPLHLAACTSDSDDIIDALTNDPQEIGP 708 (847)
Q Consensus 632 l~g~TpLH~AV~~-g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d--~~G~TPLHlAA~~~g~e~VveLLL~~p~~vGa 708 (847)
..+.|+||+|++. |+.++|++||++|+ ++|..+ ..|.||||+||.. +..+++++|+++
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Ga------------dvn~~~~~~~g~TpLh~Aa~~-g~~~iv~~LL~~------ 257 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGA------------DVNWVNGGQDNATPLIQATAA-NSLLACEFLLQN------ 257 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTC------------CTTCCCTTTTCCCHHHHHHHT-TCHHHHHHHHHT------
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCC------------CCCccccccCCCCHHHHHHHC-CCHHHHHHHHHc------
Confidence 3567999999999 99999999999998 567777 8999999999985 678899999998
Q ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 709 SSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 709 gA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+|++|.+|..|+||||+|+..|+.+++++|++++++.
T Consensus 258 Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~ 294 (368)
T 3jue_A 258 GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL 294 (368)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC
Confidence 5789999999999999999999999999999998775
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.43 E-value=1.6e-13 Score=153.29 Aligned_cols=93 Identities=19% Similarity=0.060 Sum_probs=82.8
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCC------CCCCChHHHHHHh--cCCcHHHHHHHhCCCCCC
Q 003109 635 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLA------GPGGITPLHLAAC--TSDSDDIIDALTNDPQEI 706 (847)
Q Consensus 635 ~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~------d~~G~TPLHlAA~--~~g~e~VveLLL~~p~~v 706 (847)
.+.||.|++.|+.++|+.||++|++ +|.. +..|.||||+|+. ..++.+++++|+++
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~------------~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~---- 196 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD------------FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN---- 196 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC------------SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH----
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc------------ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc----
Confidence 3779999999999999999999984 4444 8899999999953 24678899999998
Q ss_pred CCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 707 GPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 707 GagA~vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
||++|++|.+|+||||+|+.+|+.+++++|++++++.
T Consensus 197 --ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 233 (497)
T 3lvq_E 197 --GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALV 233 (497)
T ss_dssp --SCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC
T ss_pred --CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5789999999999999999999999999999998886
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.43 E-value=3.1e-13 Score=140.42 Aligned_cols=100 Identities=22% Similarity=0.151 Sum_probs=86.6
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcC--CcHHHHHHHhCCCCCCCCCCC
Q 003109 634 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTS--DSDDIIDALTNDPQEIGPSSW 711 (847)
Q Consensus 634 g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l~d~na~d~~G~TPLHlAA~~~--g~e~VveLLL~~p~~vGagA~ 711 (847)
..++||.|++.|+.+.++.|++.|++.. ..+.++..+..|.||||+||..+ +..+++++|+++ ||+
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~------~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~------ga~ 197 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLT------EKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN------SGN 197 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTT------SBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH------CSC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchh------hhccccccccCCCCcchHHHHhcccchHHHHHHHHHC------CCC
Confidence 4589999999999999999999998531 01125677889999999999863 678899999998 578
Q ss_pred CccCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 003109 712 NSILDASGHSPYSYALMKNNHAYNKLVARKLADR 745 (847)
Q Consensus 712 vnarD~~G~TPLHyAa~~G~~eiIeLLl~K~a~~ 745 (847)
+|.+|.+|+||||+|+.+|+.+++++|++++++.
T Consensus 198 in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~ 231 (278)
T 1dcq_A 198 LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI 231 (278)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999998874
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.38 E-value=1.4e-12 Score=116.01 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=74.7
Q ss_pred hhhHHHHHHHhcCchhHHHHHHHHHHhccccCCCCcHHHHhhccCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 003109 590 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 669 (847)
Q Consensus 590 R~k~LL~FAvdrGw~AVVK~LLd~l~~g~vdid~~s~~~~~~l~g~TpLH~AV~~g~~eIVeLLL~~GA~~~~~s~~~~l 669 (847)
..+++||+|+..|+.++++.|++. +++++.. +. .|.||||+|++.|+.++|++||++|+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~----g~~i~~~-----d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga----------- 81 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMAN----GADVAAK-----DK-NGSTPLHLAARNGHLEVVKLLLEAGA----------- 81 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT----TCCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHHTTC-----------
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc----CCCCCcc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 467999999999999999999985 3444433 22 58999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHH
Q 003109 670 FPPNLAGPGGITPLHLAACTSDSDDIIDAL 699 (847)
Q Consensus 670 ~d~na~d~~G~TPLHlAA~~~g~e~VveLL 699 (847)
++|.+|..|+||||+|+.. +..+++++|
T Consensus 82 -~~~~~d~~g~tpl~~A~~~-~~~~~~~~L 109 (110)
T 2zgd_A 82 -DVXAQDKFGKTAFDISIDN-GNEDLAEIL 109 (110)
T ss_dssp -CTTCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred -CccccccCCCcHHHHHHHc-CCHHHHHHh
Confidence 5789999999999999986 677798877
No 115
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=63.87 E-value=19 Score=32.36 Aligned_cols=47 Identities=13% Similarity=0.061 Sum_probs=39.2
Q ss_pred CCceeEecceeEecCCeeEEEEEeccCCCCCcEEEEeecCccceeeec
Q 003109 424 SPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVT 471 (847)
Q Consensus 424 sP~I~~V~P~Av~ag~~~~~~v~G~NL~~p~trlLc~~~GkYl~~E~~ 471 (847)
.=.|..++|-+-..+.-+.+.|.|.+|.. +..+.|.|.+.-..+|..
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~~~ 52 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASLI 52 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEEE
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEEEe
Confidence 34899999999999999999999999964 568999998866656653
No 116
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=44.05 E-value=35 Score=30.53 Aligned_cols=40 Identities=25% Similarity=0.306 Sum_probs=32.5
Q ss_pred CCCceeEecceeEecCCeeEEEEEeccCCCCCcEE-EEeecCc
Q 003109 423 SSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKI-HCTFMGG 464 (847)
Q Consensus 423 ~sP~I~~V~P~Av~ag~~~~~~v~G~NL~~p~trl-Lc~~~Gk 464 (847)
..|+|..++|..-..| +.+.++|.||......+ -+.+.|.
T Consensus 6 p~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 6 QPPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 4589999999888665 99999999998876655 4777774
No 117
>1pby_A Quinohemoprotein amine dehydrogenase 60 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: a.3.1.7 a.3.1.7 b.1.18.14 b.1.18.14 b.61.4.1 PDB: 1jju_A*
Probab=33.09 E-value=53 Score=37.54 Aligned_cols=44 Identities=20% Similarity=0.364 Sum_probs=36.5
Q ss_pred CCCCCceeEecceeEecCCeeEEEEEeccCCC-----CCcEEEEeecCc
Q 003109 421 TWSSPELISVSPLAVVGGQELSFKLRGRNLTN-----LGTKIHCTFMGG 464 (847)
Q Consensus 421 s~~sP~I~~V~P~Av~ag~~~~~~v~G~NL~~-----p~trlLc~~~Gk 464 (847)
....|+|+.|.|-.+.+|.+++++|-|.+|.. ++-++.-+..++
T Consensus 272 ~~~~~~~~av~P~~l~aG~~~~~~i~G~gL~g~~~l~~gv~v~~~s~~~ 320 (489)
T 1pby_A 272 ADAAPQVLAVAPARLKIGEETQLRVAGTGLGSDLTLPEGVAGSVESAGN 320 (489)
T ss_dssp TTCSSEEEEEESCEEETTCCEEEEEEEESCCSCEECCTTEEEEEEECCT
T ss_pred cCCCceEEEeChhhhcCCCceEEEEEecccccccccCCceEEEEecCCc
Confidence 46789999999999999999999999999975 567777444443
No 118
>1jmx_A Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: a.3.1.7 a.3.1.7 b.1.18.14 b.1.18.14 b.61.4.1 PDB: 1jmz_A*
Probab=30.09 E-value=61 Score=37.09 Aligned_cols=31 Identities=26% Similarity=0.393 Sum_probs=29.0
Q ss_pred CCCCCceeEecceeEecCCeeEEEEEeccCCC
Q 003109 421 TWSSPELISVSPLAVVGGQELSFKLRGRNLTN 452 (847)
Q Consensus 421 s~~sP~I~~V~P~Av~ag~~~~~~v~G~NL~~ 452 (847)
.. .|+|+.|.|-.+.+|.+++++|-|.+|..
T Consensus 281 ~~-~~~~~av~p~~~~ag~~~~~~i~G~gl~g 311 (494)
T 1jmx_A 281 EG-KARLLAVQPAFIKAGGESEITLVGSGLAG 311 (494)
T ss_dssp TT-SCEEEEEESSEEETTCEEEEEEEEESCCS
T ss_pred cC-CceEEEEChhhhcCCCceEEEEEeccccc
Confidence 35 99999999999999999999999999975
Done!