Your job contains 1 sequence.
>003111
MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSE
LSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWH
LMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCR
SLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI
LRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR
YEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFA
EYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKVTA
SLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEFEH
TCLLNCDPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRV
QYVEDVSGNQDKAVNGSETPGEAPLCVYFINGSCNRGTGCPFSHSLQAKRPACKFFYSLQ
GCRNGDSCIFSHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHF
SANLACLYDPSRIISTTCLSDSAICDTSLAGIRILWGLCHSLKTVISEAGDNPIPWKEVK
CVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTRVIITMNNIKFAQLQVEKL
ARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTDFQFGDYAAVLH
RCLRDN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003111
(846 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043413 - symbol:AT2G47680 species:3702 "Arabi... 2670 8.6e-278 1
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 274 9.1e-20 1
RGD|1306942 - symbol:Tdrd9 "tudor domain containing 9" sp... 253 1.8e-19 2
UNIPROTKB|H0YJJ2 - symbol:TDRD9 "Putative ATP-dependent R... 255 1.8e-19 2
UNIPROTKB|E2RNZ8 - symbol:TDRD9 "Uncharacterized protein"... 252 2.3e-19 3
UNIPROTKB|J9P8U1 - symbol:TDRD9 "Uncharacterized protein"... 252 2.3e-19 3
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 269 3.1e-19 1
MGI|MGI:1921941 - symbol:Tdrd9 "tudor domain containing 9... 254 3.3e-19 3
UNIPROTKB|F1S9V4 - symbol:TDRD9 "Uncharacterized protein"... 254 3.3e-19 2
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 267 5.2e-19 1
UNIPROTKB|Q8NDG6 - symbol:TDRD9 "Putative ATP-dependent R... 255 5.8e-19 2
UNIPROTKB|F1MNA1 - symbol:TDRD9 "Uncharacterized protein"... 253 6.1e-19 2
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 266 7.3e-19 1
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 268 1.1e-18 2
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 264 1.1e-18 1
UNIPROTKB|E2RNZ9 - symbol:TDRD9 "Uncharacterized protein"... 252 1.2e-18 3
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 262 1.8e-18 1
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 258 4.8e-18 1
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 258 4.8e-18 1
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 258 4.8e-18 1
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 254 1.3e-17 1
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 256 3.8e-17 2
ZFIN|ZDB-GENE-090313-193 - symbol:tdrd9 "tudor domain con... 239 1.1e-16 4
UNIPROTKB|F1NWS9 - symbol:TDRD9 "Uncharacterized protein"... 253 2.0e-16 2
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 241 2.3e-15 2
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 242 3.2e-15 3
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 240 4.9e-15 2
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 240 4.9e-15 2
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 229 6.0e-15 1
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 228 8.2e-15 1
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 228 8.2e-15 1
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 236 1.4e-14 2
UNIPROTKB|C3XYZ4 - symbol:BRAFLDRAFT_65715 "Putative unch... 225 1.9e-14 1
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 219 4.9e-14 1
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 219 5.0e-14 1
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 221 5.1e-14 1
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 237 6.1e-14 3
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 231 7.4e-14 2
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 226 9.7e-14 2
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 231 1.1e-13 2
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 231 1.1e-13 2
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 216 1.6e-13 1
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 225 1.9e-13 2
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 229 2.3e-13 2
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 214 2.9e-13 1
UNIPROTKB|I3LRK0 - symbol:I3LRK0 "Uncharacterized protein... 207 3.4e-13 1
TAIR|locus:2125211 - symbol:AT4G01020 species:3702 "Arabi... 212 3.4e-13 3
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 225 3.6e-13 2
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 229 5.5e-13 3
FB|FBgn0003483 - symbol:spn-E "spindle E" species:7227 "D... 217 7.2e-13 2
UNIPROTKB|H7C5F5 - symbol:DHX36 "Probable ATP-dependent R... 181 8.4e-13 1
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 209 8.6e-13 1
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 220 8.7e-13 2
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 208 9.3e-13 1
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 207 1.2e-12 1
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 207 1.3e-12 1
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 207 1.3e-12 1
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 207 1.3e-12 1
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 207 1.3e-12 1
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 207 1.3e-12 1
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 206 1.5e-12 1
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 206 1.6e-12 1
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 206 1.6e-12 1
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 206 1.7e-12 1
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 206 1.7e-12 1
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 206 1.7e-12 1
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 206 1.7e-12 1
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 205 2.4e-12 1
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 217 2.6e-12 2
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 204 2.7e-12 1
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 204 3.3e-12 1
ASPGD|ASPL0000008624 - symbol:AN5839 species:162425 "Emer... 204 3.4e-12 1
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 220 4.2e-12 3
UNIPROTKB|G4NI12 - symbol:MGG_17793 "Uncharacterized prot... 213 5.0e-12 2
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 198 5.0e-12 1
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 212 6.8e-12 2
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 211 8.1e-12 2
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 200 8.6e-12 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 183 8.7e-12 3
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 217 9.1e-12 3
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 198 1.1e-11 1
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 198 1.2e-11 1
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 198 1.4e-11 1
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 196 1.5e-11 1
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 215 1.7e-11 3
UNIPROTKB|J3KR71 - symbol:DHX34 "Probable ATP-dependent R... 192 1.8e-11 1
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 197 1.8e-11 1
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 209 2.1e-11 2
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 214 2.2e-11 3
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 209 2.2e-11 3
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 204 2.8e-11 2
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 194 3.0e-11 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 194 3.0e-11 1
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 198 3.3e-11 2
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 204 3.6e-11 3
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 190 3.8e-11 1
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 192 4.9e-11 1
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 193 5.0e-11 1
TAIR|locus:2007003 - symbol:FAS4 "FASCIATED STEM 4" speci... 192 5.4e-11 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 188 5.8e-11 2
WARNING: Descriptions of 197 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2043413 [details] [associations]
symbol:AT2G47680 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0019243 "methylglyoxal catabolic process to D-lactate"
evidence=RCA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 GO:GO:0005524
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AC005309 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 EMBL:AB493597
IPI:IPI00519204 PIR:C84918 PIR:T00416 RefSeq:NP_182290.1
UniGene:At.36329 ProteinModelPortal:O22243 SMR:O22243 PaxDb:O22243
PRIDE:O22243 EnsemblPlants:AT2G47680.1 GeneID:819381
KEGG:ath:AT2G47680 GeneFarm:1818 TAIR:At2g47680
HOGENOM:HOG000082976 InParanoid:O22243 OMA:AYVIDSC PhylomeDB:O22243
ProtClustDB:CLSN2683720 Genevestigator:O22243 GO:GO:0008026
Uniprot:O22243
Length = 1015
Score = 2670 (944.9 bits), Expect = 8.6e-278, P = 8.6e-278
Identities = 513/851 (60%), Positives = 641/851 (75%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSE 60
MSATADIT+YRDYF++LGRGERVEV+AIPS +QRTIFQRRV YLEQV LLGV +S+
Sbjct: 175 MSATADITRYRDYFKELGRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGV----SSD 230
Query: 61 LSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWH 120
LS+ YC GPSPS A+ EIKPE+ LIHDL+L+IH+ E DIEKSILVFLPTYY+LEQQ+H
Sbjct: 231 LSA--YCPGPSPSSADTEIKPELQNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYH 288
Query: 121 LMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCR 180
++P + F+VHILH S+DTEQAL AMKIC+S RKVILATNIAESSVTIPKVAYVIDSCR
Sbjct: 289 QLEPFFASFEVHILHRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCR 348
Query: 181 SLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
SLQVFWD +RK D+ +LVWVS+SQAEQRRGRTGRTCDG+VYRLV +FF LE+HE P+I
Sbjct: 349 SLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSI 408
Query: 241 XXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR 300
ICC ES+AI+D LL KA+DPP P+VV DAL +L +AL+K SPRGR
Sbjct: 409 LKLSLRQQVLHICCTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRK-SPRGR 467
Query: 301 YEPTFYGRXXXXXXXXXXXXXXXXKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFA 360
YEPTFYGR KFGE+GMLR+GILLG+LMDT PLPI HPFGDD+LF
Sbjct: 468 YEPTFYGRLLASFPLSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGDDSLFL 527
Query: 361 EYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKVTA 420
EY YFGG + + GR+EMV+M N CAFQFWQ VFKDK RL++L+Q+L ++ K
Sbjct: 528 EYVDHYFGG--SKTISGGRREMVLMANFCAFQFWQRVFKDKHRLENLKQLLSKEKDKDLK 585
Query: 421 SLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEFEH 480
+ P+IE+EWC H + QSS +HVSELYED L++ HRFRP+F+ +S+ PTYY+PYEF+H
Sbjct: 586 LMFPEIEKEWCDFHNIAQSSFYHVSELYEDTLSSFHRFRPQFISSSDSQPTYYNPYEFDH 645
Query: 481 TCLLNCDPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRV 540
TC + C P D + D ++ P E +KCV+VPFV PN FQ+N +AE +ASIIKEIR
Sbjct: 646 TCYIECQPSEDKYLHSEDVDNNQPPPEVRKCVSVPFVPPNAFQANAIAENMASIIKEIRT 705
Query: 541 QYVEDVSGNQDKAVNGSETP--GEAPLCVYFINGSCNRGTGCPFSHSLQAKRPACKFFYS 598
Q S N A+ + GEAP+CVYF+NG CNRG C F+H+LQ+ RPACKFF S
Sbjct: 706 QCTPSESDNGHGALEPEDYVEYGEAPVCVYFLNGYCNRGGQCTFTHTLQSTRPACKFFAS 765
Query: 599 LQGCRNGDSCIFSHDLGQPV---LPSSSFTCLPEDGVANAASLLRLFPTSSDGSILLLDD 655
QGCRNG+SC+FSH + + LP CLPE+ ++ + LL LFPTSS+G IL+ DD
Sbjct: 766 SQGCRNGESCLFSHAMRRRTTSYLPPPQ--CLPEEDGSSTSPLLDLFPTSSEGCILVFDD 823
Query: 656 TDMHFSANLACLYDPSRIISTTCLSDSAICDTSLAGIRILWGLCHSLKTVISEAG-DNPI 714
+DMHF++++A Y RI+ST+ S++ CD+SLA RI WGL H +T+IS+AG +NPI
Sbjct: 824 SDMHFTSSIANRYPSWRILSTSSSSETLFCDSSLADTRIFWGLNHPYQTIISKAGRENPI 883
Query: 715 PWKEVKCVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTRVIITMNNIKFAQ 774
PW EVKCVLW+ + +SY++ E QKT++QNFFEH+AIR+L D LY RV++TMNN++F+
Sbjct: 884 PWNEVKCVLWFLNPDSYADTPEKQKTILQNFFEHMAIRLLGDKLYKIRVVLTMNNVRFSL 943
Query: 775 LQVEKLARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTDFQFGD 834
LQVEKLAR+SFFFL ESFP D SFG DT+ ++PMLVSR ISYVF+LHPP+D QFG+
Sbjct: 944 LQVEKLARESFFFLGESFPHDSESFGAFQDTLTIQKPMLVSRPISYVFNLHPPSDIQFGN 1003
Query: 835 YAAVLHRCLRD 845
Y ++L + L +
Sbjct: 1004 YTSLLRKSLHN 1014
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 274 (101.5 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 84/274 (30%), Positives = 142/274 (51%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNES-- 99
+++ E + V G + ELS A + P HK+ DL+L ++ ++S
Sbjct: 805 IKKYQECIPVQSGASPELSPFYQKYSSRTQYAVLYMNP--HKINLDLILELLVYLDKSPQ 862
Query: 100 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTE-QALMAMKICKS 152
+IE ++L+FLP ++Q + L+ F+ ++ LHS + T+ QA M
Sbjct: 863 FRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIALHSVLSTQDQAAAFMLPPPG 922
Query: 153 HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 212
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 982
Query: 213 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 271
GR DG +RL T+ F ++ P I +C K + P+ L KAL
Sbjct: 983 GRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEE----LCLHIMKCDLGSPEDFLSKAL 1038
Query: 272 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
DPP P+V+ +A++LL A + K++P G++
Sbjct: 1039 DPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQH 1072
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 253 (94.1 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 71/213 (33%), Positives = 103/213 (48%)
Query: 104 SILVFLPTYYALEQQWHLM-KPLSSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 389 SVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 448
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ +QR+GR GR G Y
Sbjct: 449 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCY 508
Query: 222 RLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RL+ + F+ + + DH P + + + + +P+ LL AL PP +
Sbjct: 509 RLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 565
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 566 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 598
Score = 72 (30.4 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
PK E +W L+Y+ + V+ELYE++ N + +F
Sbjct: 685 PKDELDWGRLNYIQIKRIREVAELYEELKNRISQF 719
Score = 38 (18.4 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 611 SHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPT 644
S LG+ ++ F CL E + AA L+ F T
Sbjct: 606 SQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFT 639
>UNIPROTKB|H0YJJ2 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AL136001 EMBL:AL132712 HGNC:HGNC:20122
Ensembl:ENST00000557332 Uniprot:H0YJJ2
Length = 918
Score = 255 (94.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 74/213 (34%), Positives = 102/213 (47%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ L +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 114 SVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTN 173
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 174 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCY 233
Query: 222 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLV K F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 234 RLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPGLSDIE 290
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 291 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 323
Score = 65 (27.9 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 387 NLCAFQFWQHV--------FKDKQRLDHLQQVLKFDETKV---TASL-LPKIEEEWCSLH 434
N A F QH+ F + D + V F K T L PK E W L+
Sbjct: 361 NFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLN 420
Query: 435 YLVQSSLHHVSELYEDILNAVHRF 458
Y+ + V+ELYE++ + +F
Sbjct: 421 YIQIKRIREVAELYEELKTRISQF 444
>UNIPROTKB|E2RNZ8 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000029096 Uniprot:E2RNZ8
Length = 1115
Score = 252 (93.8 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 72/213 (33%), Positives = 102/213 (47%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 120 SVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 179
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 180 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSKGYCY 239
Query: 222 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLV + F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 240 RLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 296
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 297 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 329
Score = 78 (32.5 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
PK E +W LHY+ + V+ELYE++ N + +F
Sbjct: 416 PKDELDWGRLHYVQIKRIREVAELYEELKNRISQF 450
Score = 38 (18.4 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + ++ DYF
Sbjct: 19 MSATINCKEFADYF 32
>UNIPROTKB|J9P8U1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000043378 Uniprot:J9P8U1
Length = 1120
Score = 252 (93.8 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 72/213 (33%), Positives = 102/213 (47%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 125 SVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 184
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 185 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSKGYCY 244
Query: 222 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLV + F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 245 RLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 301
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 302 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 334
Score = 78 (32.5 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
PK E +W LHY+ + V+ELYE++ N + +F
Sbjct: 421 PKDELDWGRLHYVQIKRIREVAELYEELKNRISQF 455
Score = 38 (18.4 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + ++ DYF
Sbjct: 24 MSATINCKEFADYF 37
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 269 (99.8 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 82/274 (29%), Positives = 144/274 (52%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNES-- 99
+++ E + V G +++L+ Y S + +A + HK+ DL+L + + + S
Sbjct: 802 IKKYQEYIPVQTGTSADLNPF-YQKYSSRTQ-HAILYMNPHKINLDLILELLTYLDRSPQ 859
Query: 100 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC-KS 152
++E ++L+FLP ++Q + L+ FF KV LHS + T+ A + +
Sbjct: 860 FKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQG 919
Query: 153 HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 212
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 920 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 979
Query: 213 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 271
GR DG +R+ T+ F D+ P I +C K + P+ L KAL
Sbjct: 980 GRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKAL 1035
Query: 272 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
DPP +V+ +A++LL A + K++P G++
Sbjct: 1036 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQH 1069
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 254 (94.5 bits), Expect = 3.3e-19, Sum P(3) = 3.3e-19
Identities = 71/213 (33%), Positives = 103/213 (48%)
Query: 104 SILVFLPTYYALEQQWHLM-KPLSSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 388 SVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 447
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ +QR+GR GR G Y
Sbjct: 448 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCY 507
Query: 222 RLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RL+ + F+ + + DH P + + + + +P+ LL AL PP +
Sbjct: 508 RLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPSLSDIE 564
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 565 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 597
Score = 78 (32.5 bits), Expect = 3.3e-19, Sum P(3) = 3.3e-19
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYE 477
PK E +W L+Y+ + V+ELYE++ N + +F F+G + + PY+
Sbjct: 684 PKDELDWGRLNYIQIKRIREVAELYEELKNRISQFN-MFVGPHHPVLDQEYPYK 736
Score = 39 (18.8 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 611 SHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPT 644
S LG+ V+ F CL E + AA L+ F T
Sbjct: 605 SQQLGKLVVLGHVFGCLDECLIIAAALSLKNFFT 638
Score = 38 (18.4 bits), Expect = 3.3e-19, Sum P(3) = 3.3e-19
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + ++ DYF
Sbjct: 288 MSATINCKQFADYF 301
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 254 (94.5 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 76/214 (35%), Positives = 103/214 (48%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV E Q + + +RKVIL+TN
Sbjct: 394 SVLVFLPGLGEINCMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKVILSTN 453
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR-GRTGRTCDGQV 220
IAESSVT+P V YVID C + + D + S L W S++ QR+ GR GR G
Sbjct: 454 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEGRAGRVSKGYC 513
Query: 221 YRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVV 279
YRLV K F+ T + DH P + + + + +P+ LL AL PP +
Sbjct: 514 YRLVPKDFWDTSIPDHVIPEMLRCPLGSTILKLKLLD---MGEPRALLATALSPPSLGDI 570
Query: 280 GDALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL PR P TF GR
Sbjct: 571 ERTILLLKEVGALAVRGPRDDENPHDGELTFLGR 604
Score = 68 (29.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
PK E +W L+Y+ + V+ELYE++ + V +F
Sbjct: 691 PKDELDWGRLNYIQIKRIREVAELYEELKSRVSQF 725
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 267 (99.0 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 85/274 (31%), Positives = 144/274 (52%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNES-- 99
+++ E + V G + EL+ Y S + +A + HK+ DL+L ++ ++S
Sbjct: 804 VKKYQEYIPVQSGASPELNPF-YQKYSSRTQ-HAILYMNPHKINLDLILELLVYLDKSPQ 861
Query: 100 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTE-QALMAMKICKS 152
+IE ++L+FLP ++Q + L+ F+ +V LHS + T+ QA M
Sbjct: 862 FRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPG 921
Query: 153 HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 212
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 922 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 981
Query: 213 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 271
GR DG +RL T+ F D+ P I +C K + P+ L KAL
Sbjct: 982 GRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEE----LCLHIMKCDLGSPEDFLSKAL 1037
Query: 272 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
DPP +V+ +A++LL A + K++P G++
Sbjct: 1038 DPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQH 1071
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 255 (94.8 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 74/213 (34%), Positives = 102/213 (47%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ L +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 387 SVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTN 446
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 447 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCY 506
Query: 222 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLV K F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 507 RLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPGLSDIE 563
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 564 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 596
Score = 65 (27.9 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 387 NLCAFQFWQHV--------FKDKQRLDHLQQVLKFDETKV---TASL-LPKIEEEWCSLH 434
N A F QH+ F + D + V F K T L PK E W L+
Sbjct: 634 NFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLN 693
Query: 435 YLVQSSLHHVSELYEDILNAVHRF 458
Y+ + V+ELYE++ + +F
Sbjct: 694 YIQIKRIREVAELYEELKTRISQF 717
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 253 (94.1 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 73/213 (34%), Positives = 103/213 (48%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 393 SVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 452
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ EQR+GR GR G Y
Sbjct: 453 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGRAGRVSKGYCY 512
Query: 222 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLV K F+ ++ +H P + + + + +P+ LL AL PP +
Sbjct: 513 RLVHKDFWDNSIPNHVIPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPSLSDIE 569
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 570 RTILLLKEVGALAVSGRREDDNPHDGELTFLGR 602
Score = 67 (28.6 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
PK E +W L+Y+ + V+ELYE++ V +F
Sbjct: 692 PKDELDWGRLNYIQIKRIREVAELYEELKTRVSQF 726
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 266 (98.7 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 78/229 (34%), Positives = 122/229 (53%)
Query: 84 HKLIHDLVLHI-HKNESDIEKSILVFLPTYYALEQQWHLMK--PL---SSFFKVHILHSS 137
H++I L++HI K S E SIL+FLP + + Q LM+ P+ + F + LHSS
Sbjct: 930 HEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELMRRHPMLRNENEFLILPLHSS 989
Query: 138 VDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 196
V + QA + K RK++L+TNIAE+S+TI V YVIDS + + + R + +
Sbjct: 990 VSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQ 1049
Query: 197 LVWVSQSQAEQRRGRTGRTC-DGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCA 255
VW +S +QRRGR GR DG Y +V++ + TLE+ + + C
Sbjct: 1050 TVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHEL-----CL 1104
Query: 256 ESKAI--SDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRG 299
+ K + D L +AL+PP + + +A++LL AL Q+++P G
Sbjct: 1105 QVKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLG 1153
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 268 (99.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 72/230 (31%), Positives = 126/230 (54%)
Query: 85 KLIHDLVLHIHKNES--DIEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSS 137
+LI +L+ ++ ++ + E ++L+FLP ++Q + L+ F ++ LHS
Sbjct: 849 ELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSV 908
Query: 138 VDTEQALMAMKICK-SHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 196
+ T+ A + RK++LATNIAE+ +TIP V +VIDS R+ + + + ++ S E
Sbjct: 909 LSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLE 968
Query: 197 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAE 256
+VS++ A QR+GR GR DG +R+ T+ F + ++ P I +C
Sbjct: 969 ETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEE----LCLHI 1024
Query: 257 SKA-ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
K + P+ L +ALDPP P+V+G+A++LL A Q K++P G++
Sbjct: 1025 MKCNLGSPEDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQH 1074
Score = 49 (22.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 1 MSATADITKYRDYF------RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQVTE 49
MSAT D K+ YF R GR VEV + + T + ++ Y ++ E
Sbjct: 734 MSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVEDVIEATGYVLEKDSEYCQKFLE 790
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 264 (98.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 79/250 (31%), Positives = 131/250 (52%)
Query: 49 ELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNES----DIE 102
E + V+ G +++L+ + S +A + HK+ DL+L I+ + S +IE
Sbjct: 807 EYIPVNTGSSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLIYLDRSPQFRNIE 864
Query: 103 KSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKICKSH-RKVI 157
++L+FLP ++Q + L+ FF KV LHS + T+ A + RK++
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIV 924
Query: 158 LATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCD 217
LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR GR D
Sbjct: 925 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 984
Query: 218 GQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKALDPPYP 276
G +R+ T+ F D+ P I +C K + P+ L KALDPP
Sbjct: 985 GFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKALDPPQL 1040
Query: 277 EVVGDALDLL 286
+V+ +A++LL
Sbjct: 1041 QVISNAMNLL 1050
>UNIPROTKB|E2RNZ9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 OMA:INDWFTI EMBL:AAEX03006064
EMBL:AAEX03006065 EMBL:AAEX03006066 Ensembl:ENSCAFT00000029095
Uniprot:E2RNZ9
Length = 1127
Score = 252 (93.8 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 72/213 (33%), Positives = 102/213 (47%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV E Q + + +RK+IL+TN
Sbjct: 132 SVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 191
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 192 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSKGYCY 251
Query: 222 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLV + F+ ++ DH P + + + + +P+ LL AL PP +
Sbjct: 252 RLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 308
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGR 308
+ LL AL R P TF GR
Sbjct: 309 RTILLLKEVGALAVSGQREDENPHDGELTFLGR 341
Score = 71 (30.1 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 425 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
K E +W LHY+ + V+ELYE++ N + +F
Sbjct: 429 KDELDWGRLHYVQIKRIREVAELYEELKNRISQF 462
Score = 38 (18.4 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + ++ DYF
Sbjct: 31 MSATINCKEFADYF 44
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 262 (97.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 82/274 (29%), Positives = 143/274 (52%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNES-- 99
+++ E + V G ++L+ Y S + +A + HK+ DL+L + + ++S
Sbjct: 805 IKKYQEYIPVQTGAHADLNPF-YQKYSSRTQ-HAILYMNPHKINLDLILELLAYLDKSPQ 862
Query: 100 --DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKICKSH 153
+IE ++L+FLP ++Q + L+ F+ KV LHS + T+ A +
Sbjct: 863 FRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPG 922
Query: 154 -RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 212
RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR
Sbjct: 923 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 982
Query: 213 GRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKAL 271
GR DG +R+ T+ F D+ P I +C K + P+ L KAL
Sbjct: 983 GRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKAL 1038
Query: 272 DPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
DPP +V+ +A++LL A + K++P G++
Sbjct: 1039 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 258 (95.9 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 81/277 (29%), Positives = 141/277 (50%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNESD- 100
+++ E + V G +++L+ + S +A + HK+ DL+L + + +D
Sbjct: 802 IKKYQEYIPVQTGTSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 101 ------IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC 150
+E ++L+FLP ++Q + L+ FF KV LHS + T+ A +
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 151 -KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 209
+ RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 210 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQ 268
GR GR DG +R+ T+ F D+ P I +C K + P+ L
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLS 1035
Query: 269 KALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
KALDPP +V+ +A+ LL A + K++P G++
Sbjct: 1036 KALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 258 (95.9 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 81/277 (29%), Positives = 141/277 (50%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNESD- 100
+++ E + V G +++L+ + S +A + HK+ DL+L + + +D
Sbjct: 802 IKKYQEYIPVQTGTSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 101 ------IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC 150
+E ++L+FLP ++Q + L+ FF KV LHS + T+ A +
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 151 -KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 209
+ RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 210 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQ 268
GR GR DG +R+ T+ F D+ P I +C K + P+ L
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLS 1035
Query: 269 KALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
KALDPP +V+ +A+ LL A + K++P G++
Sbjct: 1036 KALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 258 (95.9 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 81/277 (29%), Positives = 141/277 (50%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI--HKNESD- 100
+++ E + V G +++L+ + S +A + HK+ DL+L + + +D
Sbjct: 802 IKKYQEYIPVQTGTSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDR 859
Query: 101 ------IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKIC 150
+E ++L+FLP ++Q + L+ FF KV LHS + T+ A +
Sbjct: 860 SPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLP 919
Query: 151 -KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 209
+ RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+
Sbjct: 920 PQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 210 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQ 268
GR GR DG +R+ T+ F D+ P I +C K + P+ L
Sbjct: 980 GRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLS 1035
Query: 269 KALDPPYPEVVGDALDLLDHKRALQ----KISPRGRY 301
KALDPP +V+ +A+ LL A + K++P G++
Sbjct: 1036 KALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQH 1072
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 254 (94.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 79/253 (31%), Positives = 129/253 (50%)
Query: 49 ELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNESD------ 100
E + V+ G +++L+ + S +A + HK+ DL+L I+ D
Sbjct: 807 EYIPVNTGSSADLNP--FYQKYSNRTQHAILYMNPHKINLDLILELLIYLEIPDRSPQFR 864
Query: 101 -IEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKICKSH-R 154
IE ++L+FLP ++Q + L+ FF KV LHS + T+ A + R
Sbjct: 865 NIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVR 924
Query: 155 KVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGR 214
K++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR GR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 215 TCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA-ISDPKVLLQKALDP 273
DG +R+ T+ F D+ P I +C K + P+ L KALDP
Sbjct: 985 VRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE----LCLHIMKCNLGSPEDFLSKALDP 1040
Query: 274 PYPEVVGDALDLL 286
P +V+ +A++LL
Sbjct: 1041 PQLQVISNAMNLL 1053
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 256 (95.2 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 77/227 (33%), Positives = 120/227 (52%)
Query: 87 IHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM-KPLSSF---FKVHI----LHSSV 138
I DLV +I +NE E +ILVFLP Y + Q ++++ KP +S ++ H+ LHS +
Sbjct: 409 IADLVYYICENEP--EGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLM 466
Query: 139 DT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 197
+ EQ + + RKVI++T IAE+SVTI V YVI+S R+ +D+ I S +
Sbjct: 467 QSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDE 526
Query: 198 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAES 257
VWV+++ +QRRGR GR G Y L +++ ++D P I I +
Sbjct: 527 VWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESI---ILSLKL 583
Query: 258 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRGRY 301
I DP LQ ++ P PE + ++LL AL + ++P G +
Sbjct: 584 LHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMH 630
Score = 42 (19.8 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 614 LGQPVLPSSSFTCLPEDGVANAASLL 639
+G+ +L S+ F CL D + +AA+ L
Sbjct: 640 MGKMILMSALFCCL--DPITSAAAAL 663
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 239 (89.2 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 64/182 (35%), Positives = 93/182 (51%)
Query: 104 SILVFLPTYYALEQQWH-LMKPLSSFFKVHILHSSVDTEQALMAMKI-CKSHRKVILATN 161
S+LVFLP ++ L K + +V+ LHS+V E+ + +RK+IL+TN
Sbjct: 348 SVLVFLPGLAEIQYMKEALSKLVRKRLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILSTN 407
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C Q+ D + W S++ QRRGR GR G Y
Sbjct: 408 IAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCY 467
Query: 222 RLVTKSFFGTLEDHECP--AIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVV 279
RLVT+ F+ ++E P +I + + + DP+ +L AL PP ++
Sbjct: 468 RLVTRHFW----ENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPP---IL 520
Query: 280 GD 281
GD
Sbjct: 521 GD 522
Score = 70 (29.7 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 473
PK E EW + + + V+EL+ED+ V RF +SN PT Y
Sbjct: 642 PKDELEWGKENCIQIKRIREVAELFEDLKKRVSRFNMHISSSSN--PTDY 689
Score = 42 (19.8 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 609 IFSHDLGQP-VLPSSSFTCLPED 630
+F D G V+PSSS LP D
Sbjct: 938 VFFVDFGNTTVVPSSSLRELPSD 960
Score = 38 (18.4 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 519 PNQFQSNNVAEKLASIIKEI 538
PN F + E+LAS KE+
Sbjct: 709 PNYFSQGEIDEQLAS--KEL 726
>UNIPROTKB|F1NWS9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007140 "male meiosis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0034587 "piRNA metabolic process" evidence=IEA]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IEA] [GO:0071547 "piP-body" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
GO:GO:0005524 GO:GO:0005634 GO:GO:0009566 GO:GO:0003676
GO:GO:0004386 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0071547 OMA:INDWFTI
EMBL:AADN02003787 IPI:IPI00574259 Ensembl:ENSGALT00000018863
Uniprot:F1NWS9
Length = 1180
Score = 253 (94.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 65/174 (37%), Positives = 90/174 (51%)
Query: 104 SILVFLPTYYALEQQWH-LMKPLSSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATN 161
S+LVFLP + + L + + ++V+ LHS V E Q + + +RKVIL+TN
Sbjct: 193 SVLVFLPGFCEISYMHSCLTRMFNKKWQVYPLHSRVSLEEQNNVFLNPVPGYRKVILSTN 252
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + +F D S L W S++ QRRGR GR +G Y
Sbjct: 253 IAESSVTVPDVKYVIDFCLTRTLFCDEETNYQSLRLCWASKTNCYQRRGRAGRVSNGYCY 312
Query: 222 RLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
RLV K F+ + + P + I + + +PK LL AL PP
Sbjct: 313 RLVHKDFWTDCIPEKSLPEMLICPLGATVLKI---KKLDMGEPKALLATALSPP 363
Score = 41 (19.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 424 PKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
PK E EW + + + V+EL + + V RF
Sbjct: 487 PKDELEWGRSNCIHIKKVREVAELVQLLKERVKRF 521
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 241 (89.9 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 92/317 (29%), Positives = 143/317 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIF-QRRVSYLEQVTELLGV 53
MSAT D T +++YF + GR V+ + Q T F + + + G
Sbjct: 549 MSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYFLEDCIQMTQFVPPPMDRKRKDKDDEGG 608
Query: 54 DHGMTSE-LSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY 112
D + + Y +M+ K +LI L+ +I E + ++LVFLP +
Sbjct: 609 DEDVNCNVICGSEYSPETKRAMSQLNEKETSFELIEALLKYIETLE--VPGAVLVFLPGW 666
Query: 113 YALE-QQWHL-MKPLSSFFKVHIL--HSSVDTEQALMAMK-ICKSHRKVILATNIAESSV 167
+ Q HL M P + IL HS + E+ + + KVIL+TNIAE+S+
Sbjct: 667 NLIYFMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSI 726
Query: 168 TIPKVAYVIDSCRS-LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
TI V +V+DSC+ +++F N + A VW S++ EQR+GR GR G + L ++
Sbjct: 727 TINDVVFVLDSCKQKVKLFTSHNNMTNYAT-VWASKTNLEQRKGRAGRVRPGFCFHLCSR 785
Query: 227 SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ F LE H P I I I + L KA++PP + V +A L
Sbjct: 786 ARFEKLETHMTPEIFRTPLHEVALSIKLLRLGGIGN---FLSKAIEPPPLDAVIEAEHTL 842
Query: 287 DHKRALQ---KISPRGR 300
AL +++P GR
Sbjct: 843 RELDALDSNDELTPLGR 859
Score = 44 (20.5 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPE 629
CIF+ +G V S+ TC PE
Sbjct: 878 CIFN--VGDAVCTISAATCFPE 897
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 242 (90.2 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 79/271 (29%), Positives = 131/271 (48%)
Query: 44 LEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHI------HKN 97
L ++ E V+ +S+ L+ G S N + + +K+ DL++ + N
Sbjct: 903 LVEIDEDAEVEPESSSKTELLKSLKGYSTRTRNTLAQMDEYKIDFDLIVQLISRIASDPN 962
Query: 98 ESDIEKSILVFLPTYYALEQQWHLMKPLSSF---FKVHILHSSVDTEQALMAMKICKSH- 153
D K+ILVFLP + L+ SF + V+ LHS++ TE+ A + H
Sbjct: 963 YQDYSKAILVFLPGIAEIRTLNDLLLGDRSFQQNWLVYPLHSTIATEEQEAAFLV-PPHG 1021
Query: 154 -RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 212
RK++LATNIAE+ +TIP V VID+ + ++ +D R++ ++S++ A+QRRGR
Sbjct: 1022 MRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRA 1081
Query: 213 GRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKAL 271
GR G + + TK + D + P + + + I + L KAL
Sbjct: 1082 GRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEET---LSKAL 1138
Query: 272 DPPYPEVVGDALDLLDHKRAL---QKISPRG 299
DPP + + A+D L RAL + ++P G
Sbjct: 1139 DPPSAKNIRRAIDALIDVRALTQGEDLTPLG 1169
Score = 53 (23.7 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLG--VDHGMT 58
MSAT D ++ +Y + VL +P RT F +V++LE EL G +D +
Sbjct: 850 MSATVDADRFSNYL------DGAPVLNVPG---RT-FPVQVNFLEDAVELTGYTIDQKVP 899
Query: 59 SE 60
E
Sbjct: 900 QE 901
Score = 38 (18.4 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFL 463
E ++C ++L Q +L ++ +L +L V KFL
Sbjct: 1258 EFQFCRKNFLSQQTLANIEDLKGQLL--VSLVDSKFL 1292
Score = 37 (18.1 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 751 IRMLADALYDTRVIITMNNIKFAQLQVEKLARDSF 785
IR DAL D R + ++ Q+ +L D F
Sbjct: 1146 IRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVF 1180
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 240 (89.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 76/236 (32%), Positives = 114/236 (48%)
Query: 73 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSF 128
SMA K +LI L+L+I ++ ++LVFLP + + Q HL M P S
Sbjct: 620 SMAQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHR 677
Query: 129 FKVHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+++ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 678 YQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFT 737
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXX 247
+ + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 738 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 797
Query: 248 XXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR 300
I I L KA++PP + V +A L LD A +++P GR
Sbjct: 798 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGR 850
Score = 42 (19.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 638
CIF +G + S+ TC PE ++ L
Sbjct: 869 CIFY--VGDAICTISAATCFPEPFISEGKRL 897
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 240 (89.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 76/236 (32%), Positives = 114/236 (48%)
Query: 73 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSF 128
SMA K +LI L+L+I ++ ++LVFLP + + Q HL M P S
Sbjct: 620 SMAQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHR 677
Query: 129 FKVHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+++ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 678 YQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFT 737
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXX 247
+ + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 738 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 797
Query: 248 XXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR 300
I I L KA++PP + V +A L LD A +++P GR
Sbjct: 798 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGR 850
Score = 42 (19.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 638
CIF +G + S+ TC PE ++ L
Sbjct: 869 CIFY--VGDAICTISAATCFPEPFISEGKRL 897
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 229 (85.7 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 83/288 (28%), Positives = 137/288 (47%)
Query: 28 IPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGP-SPSMANAEI---KPEV 83
+PS R R+ +E +LL D +E++ + C S NA + +V
Sbjct: 581 VPSAESR----RKRKEVEDEEQLLSEDKD-EAEINYNKVCEDKYSQKTRNAMAMLSESDV 635
Query: 84 H-KLIHDLVLHIHKNESDIEKSILVFLPTY---YALE---QQWHLMKPLSSFFKVHILHS 136
+L+ L++HI +I +ILVFLP + +AL Q ++ S + ++ HS
Sbjct: 636 SFELLEALLMHI--KSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQY-QILPCHS 692
Query: 137 SVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSA 195
+ EQ + + + K+IL+TNIAE+S+TI + +VID C++ + + + S
Sbjct: 693 QIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSY 752
Query: 196 ELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCA 255
VW S++ EQR+GR GR G + L +++ F LED+ P + I
Sbjct: 753 ATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLL 812
Query: 256 ESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KISPRGR 300
+I L KAL+PP + V +A LL R L +++P GR
Sbjct: 813 RLGSIHH---FLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGR 857
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 228 (85.3 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 69/229 (30%), Positives = 108/229 (47%)
Query: 86 LIHDLVLHIHK-------NESDIEKSILVFLPTYYALEQQW-HLMKPLSSFFKVHILHSS 137
L ++L+ H+ + E+ + SIL+FLP + + K + F LHS
Sbjct: 797 LNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSG 856
Query: 138 VDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 196
+ + + K K RKV+++TNIAE+S+TIP VID+ +S +F+D K+++ +
Sbjct: 857 LTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFD--HKLNTTK 914
Query: 197 LV--WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICC 254
L+ W SQ++ QRRGR GR G Y L TK F ++ P I +
Sbjct: 915 LIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVV-- 972
Query: 255 AESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK--ISPRGRY 301
+S IS+ L LD P + A L ALQ+ ++ G Y
Sbjct: 973 -KSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENSLTKLGNY 1020
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 228 (85.3 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 69/229 (30%), Positives = 108/229 (47%)
Query: 86 LIHDLVLHIHK-------NESDIEKSILVFLPTYYALEQQW-HLMKPLSSFFKVHILHSS 137
L ++L+ H+ + E+ + SIL+FLP + + K + F LHS
Sbjct: 797 LNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSG 856
Query: 138 VDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 196
+ + + K K RKV+++TNIAE+S+TIP VID+ +S +F+D K+++ +
Sbjct: 857 LTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFD--HKLNTTK 914
Query: 197 LV--WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICC 254
L+ W SQ++ QRRGR GR G Y L TK F ++ P I +
Sbjct: 915 LIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVV-- 972
Query: 255 AESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK--ISPRGRY 301
+S IS+ L LD P + A L ALQ+ ++ G Y
Sbjct: 973 -KSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENSLTKLGNY 1020
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 236 (88.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 81/228 (35%), Positives = 113/228 (49%)
Query: 77 AEIKPE-VH-KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQ--QWHLMKPL---SSFF 129
A I PE V LI L+ I + D +ILVFLP + + + Q L P S+ F
Sbjct: 526 ATINPEQVDVSLIQQLMRKICGDSED--GAILVFLPGWDDINKTRQRLLENPFFADSAKF 583
Query: 130 KVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
+ LHS V EQ + + RK++LATNIAES+VTI V YVIDS R + +D
Sbjct: 584 DIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDP 643
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX 248
+ + + WVS++ A+QR+GR GR G Y L ++ ++ D + P I
Sbjct: 644 YNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEEL 703
Query: 249 XXXICCAESKAISDPKV----LLQKALDPPYPEVVGDALDLLDHKRAL 292
C + K I DP LQK LDPP + + +AL +L AL
Sbjct: 704 -----CLQVK-ILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGAL 745
Score = 42 (19.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELL--GVDHGMT 58
MSAT D ++ YF G G V+ +P + R YLE V +L G D+ ++
Sbjct: 344 MSATLDAERFSGYF---G-G--CPVVRVPGFT----YPVRTLYLEDVLSILKSGGDNHLS 393
Query: 59 S 59
S
Sbjct: 394 S 394
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 225 (84.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 48/129 (37%), Positives = 76/129 (58%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHIL--HSSVDTEQALMAMKICKSH-RKVILAT 160
++LVFLP + L+ ++ +K+ +L HS++ +E+ + H RKVIL+T
Sbjct: 393 TVLVFLPGLAEINTLDELLAHETTRYKLWVLPLHSTITSEEQAQVFVPPRPHQRKVILST 452
Query: 161 NIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQV 220
NIAESS+T+P + YVID C + + D S +L W SQ+ QR+GR GR G+
Sbjct: 453 NIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGRVSSGRA 512
Query: 221 YRLVTKSFF 229
YR+V++ F+
Sbjct: 513 YRMVSREFY 521
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 219 (82.2 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 88/314 (28%), Positives = 133/314 (42%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHG-MTS 59
MSAT D+ +YF G G ++V + F+ + +LE + G H M
Sbjct: 364 MSATMDLEALSNYF---GGGTVMDV-------EGRSFEVSIYHLEDILSKTGYMHPRMEK 413
Query: 60 ELSSLRYCSGPSPSMA-----NAEIKPEV-HKLIHDLVLHIHKNESDIEKSILVFLPTYY 113
L PS +A N + P++ + LI L L + + D +++V+LP Y
Sbjct: 414 FLGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVSL-LELLLRQGDAG-AVIVYLPGYS 471
Query: 114 ALEQQW-HLMKPLS-SFFKVHILHSSVDTEQALMAMKICKSHR-KVILATNIAESSVTIP 170
+ L L + +LHS VD + + R K+IL+TNI ++S+TIP
Sbjct: 472 DMTSLLARLESSLPREQITIILLHSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIP 531
Query: 171 KVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG 230
+ YVID+ + +D L W+SQ+ A+QR GR GR C G YRL
Sbjct: 532 DLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMA 591
Query: 231 TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKV--LLQKALDPPYPEVVGDA---LDL 285
+ + P I IC A D K+ L ALD P + V + L L
Sbjct: 592 RMNLYTIPEIMRRTLDE----ICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKL 647
Query: 286 LDHKRALQKISPRG 299
L +++P G
Sbjct: 648 LGVLDERDEVTPLG 661
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 219 (82.2 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 62/180 (34%), Positives = 91/180 (50%)
Query: 126 SSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV 184
SS F V LH S+ T Q + + + RK++LATNIAESS+TI V YV+D ++ +
Sbjct: 532 SSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKET 591
Query: 185 FWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXX 244
+D K+ W+S++ A QRRGR GR G YRL K + ++ P I
Sbjct: 592 SYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTP 651
Query: 245 XXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRGRY 301
I + +I L KAL PP V +A++LL AL ++++P GR+
Sbjct: 652 LQELCLHIKSLQVGSIGS---FLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRH 708
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 221 (82.9 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 71/232 (30%), Positives = 117/232 (50%)
Query: 84 HKLIHDLVLHIHKNESDIEKSILVFLP----TYYALEQ---QWHLMKPLSSFFKVHILHS 136
++L+ +L+ HI +++ E +IL+FLP Y L+ + P + + LHS
Sbjct: 899 YELLEELICHI--DDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLP--LHS 954
Query: 137 SV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSA 195
S+ +EQ + ++ K RKVI ATNIAE+S+TI V YVIDS + + ++ +K+ S
Sbjct: 955 SIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSM 1014
Query: 196 ELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXICC 254
W+SQ+ A QR GR GR G + L T+ F L ++ P + C
Sbjct: 1015 VEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVEL-----C 1069
Query: 255 AESK--AISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KISPRGRY 301
+ K + K L +AL+PP + A+ LL A++ +++P G +
Sbjct: 1070 LQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHH 1121
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 237 (88.5 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 76/242 (31%), Positives = 117/242 (48%)
Query: 69 GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 124
GP M+ A++ K +LI L+ +I ++ ++LVFLP + + Q HL M P
Sbjct: 618 GPETKMSMAQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 675
Query: 125 L--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 181
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 676 DFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQ 735
Query: 182 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 241
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 736 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 795
Query: 242 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 298
I I L KA++PP + V +A L LD A +++P
Sbjct: 796 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 852
Query: 299 GR 300
GR
Sbjct: 853 GR 854
Score = 43 (20.2 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 638
CIF +G V S+ TC PE ++ L
Sbjct: 873 CIFY--VGDAVCTISAATCFPEPFISEGKRL 901
Score = 38 (18.4 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 646 SDGSILLLDD 655
SDG I+L+DD
Sbjct: 1078 SDGQIVLVDD 1087
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 231 (86.4 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 73/231 (31%), Positives = 118/231 (51%)
Query: 84 HKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH--------ILH 135
+ L+ +L+ HI +++ E +ILVFLP + L+ L++ ++ LH
Sbjct: 866 YDLLEELICHI--DDTCEEGAILVFLPGMSEINM---LLNRLAASYRFRGASGDWLLPLH 920
Query: 136 SSV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDS 194
SS+ TEQ + ++ K RKVI+ATNIAE+S+TI V YVIDS + + ++ ++K+ S
Sbjct: 921 SSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSS 980
Query: 195 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXIC 253
WVS++ A QR GR GR G + L T+ F L ++ P + I
Sbjct: 981 MVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHI- 1039
Query: 254 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KISPRGRY 301
+ + K L KAL+PP + A+ LL AL+ +++P G +
Sbjct: 1040 --KLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHH 1088
Score = 41 (19.5 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 399 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHH-VSELYEDILNAVHR 457
KD+Q +D ++ L D+ + +++L + S H L+ + V L+E A
Sbjct: 1132 KDEQNVDRVKLALLSDKLESSSNLNNNDRQ---SDHLLMVVAYEKWVRILHEQGFKAAES 1188
Query: 458 F-RPKFLGTS 466
F KFL +S
Sbjct: 1189 FCESKFLNSS 1198
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 226 (84.6 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 89/319 (27%), Positives = 142/319 (44%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVD 54
MSAT D T + +YF + GR V+ + Q T F ++ + D
Sbjct: 545 MSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDK--EDD 602
Query: 55 HGMTSELSSLRYCS---GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFL 109
G + + C GP ++ +++ K +LI L+ +I ++ ++LVFL
Sbjct: 603 GGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFL 660
Query: 110 PTYYAL-EQQWHLMKPL---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAE 164
P + + Q HL S +++ LHS + E+ + KVIL+TNIAE
Sbjct: 661 PGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE 720
Query: 165 SSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLV 224
+S+TI V YVIDSC+ + + + + VW S++ EQR+GR GR G + L
Sbjct: 721 TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC 780
Query: 225 TKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA-- 282
+++ F LE H P + I I L KA++PP + V +A
Sbjct: 781 SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEH 837
Query: 283 -LDLLDHKRALQKISPRGR 300
L LD A +++P GR
Sbjct: 838 TLRELDALDANDELTPLGR 856
Score = 222 (83.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 75/253 (29%), Positives = 118/253 (46%)
Query: 69 GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMKPL 125
GP ++ +++ K +LI L+ +I ++ ++LVFLP + + Q HL
Sbjct: 620 GPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLENNS 677
Query: 126 ---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 181
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 678 HFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQ 737
Query: 182 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 241
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 738 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMF 797
Query: 242 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 298
I I L KA++PP + V +A L LD A +++P
Sbjct: 798 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 854
Query: 299 GRY------EPTF 305
GR EP F
Sbjct: 855 GRILAKLPIEPRF 867
Score = 43 (20.2 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 638
CIF +G V S+ TC PE ++ L
Sbjct: 875 CIFY--VGDAVCTISAATCFPEPFISEGKRL 903
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 231 (86.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 69 GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 124
GP SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M P
Sbjct: 617 GPETRLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 125 L--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 181
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 675 HFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQ 734
Query: 182 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 241
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 735 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 794
Query: 242 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 298
I I L KA++PP + V +A L LD A +++P
Sbjct: 795 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 851
Query: 299 GR 300
GR
Sbjct: 852 GR 853
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 646 SDGSILLLDD 655
SDG I+L+DD
Sbjct: 1077 SDGQIVLVDD 1086
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 231 (86.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 69 GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKP 124
GP SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M P
Sbjct: 617 GPETRLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 125 L--SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 181
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 675 HFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQ 734
Query: 182 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 241
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 735 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMF 794
Query: 242 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 298
I I L KA++PP + V +A L LD A +++P
Sbjct: 795 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 851
Query: 299 GR 300
GR
Sbjct: 852 GR 853
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 646 SDGSILLLDD 655
SDG I+L+DD
Sbjct: 1077 SDGQIVLVDD 1086
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 216 (81.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 60/158 (37%), Positives = 84/158 (53%)
Query: 72 PSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLS-SFFK 130
P E + + H LI LV I SILVFLP + + +K S F+
Sbjct: 784 PRRKKKEYEIDYH-LISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFE 842
Query: 131 VHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 190
V LH+S++T + K + RK+I ATNIAE+S+TI V VIDS R Q+ +DV R
Sbjct: 843 VLPLHASLNTSEQRRCFKTY-TKRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVER 901
Query: 191 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSF 228
+ + + W S++ +QRRGR GR G Y+L T+ F
Sbjct: 902 DLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTRGF 939
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 225 (84.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 88/319 (27%), Positives = 142/319 (44%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVD 54
MSAT D T + +YF + GR V+ + Q T F ++ + D
Sbjct: 544 MSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDK--EDD 601
Query: 55 HGMTSELSSLRYCS---GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFL 109
G + + C GP ++ +++ K +LI L+ +I ++ ++LVFL
Sbjct: 602 GGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFL 659
Query: 110 PTYYAL-EQQWHLMKPL---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAE 164
P + + Q HL S +++ LHS + E+ + KVIL+TNIAE
Sbjct: 660 PGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE 719
Query: 165 SSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLV 224
+S+TI V YVIDSC+ + + + + VW S++ EQR+GR GR G + L
Sbjct: 720 TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC 779
Query: 225 TKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA-- 282
+++ F LE H P + I I L KA++PP + + +A
Sbjct: 780 SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAIIEAEH 836
Query: 283 -LDLLDHKRALQKISPRGR 300
L LD A +++P GR
Sbjct: 837 TLRELDALDANDELTPLGR 855
Score = 221 (82.9 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 74/253 (29%), Positives = 118/253 (46%)
Query: 69 GPSPSMANAEI--KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHLMKPL 125
GP ++ +++ K +LI L+ +I ++ ++LVFLP + + Q HL
Sbjct: 619 GPETKLSMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLENNS 676
Query: 126 ---SSFFKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 181
S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+
Sbjct: 677 HFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQ 736
Query: 182 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIX 241
+ + + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 737 KVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMF 796
Query: 242 XXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPR 298
I I L KA++PP + + +A L LD A +++P
Sbjct: 797 RTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPL 853
Query: 299 GRY------EPTF 305
GR EP F
Sbjct: 854 GRILAKLPIEPRF 866
Score = 43 (20.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 638
CIF +G V S+ TC PE ++ L
Sbjct: 874 CIFY--VGDAVCTISAATCFPEPFISEGKRL 902
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 229 (85.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 82/245 (33%), Positives = 120/245 (48%)
Query: 69 GPSP--SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHL-M 122
GP SM+ K +LI L+ +I ++ ++LVFLP + YA+++ HL M
Sbjct: 619 GPETRRSMSQLSEKETPLELIEALLKYIET--LNVPGAVLVFLPGWNLIYAMQK--HLEM 674
Query: 123 KPL--SSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSC 179
P S + + LHS + EQ + + KVIL+TNIAE+S+TI V YVIDSC
Sbjct: 675 NPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSC 734
Query: 180 RS-LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECP 238
+ +++F N + A VW S++ EQR+GR GR G + L +K+ F LE H P
Sbjct: 735 KQKVKLFTSHNNMTNYAT-VWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTP 793
Query: 239 AIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KI 295
I I I L KA++PP + V +A L AL ++
Sbjct: 794 EIFRTPLHEVALSIKLLRLGGIGH---FLSKAIEPPPLDAVIEAEHTLRELDALDSNDEL 850
Query: 296 SPRGR 300
+P GR
Sbjct: 851 TPLGR 855
Score = 37 (18.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 21/106 (19%), Positives = 44/106 (41%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHFSANLACL 667
CIF +G + S+ TC PE ++ L + + +D ++
Sbjct: 874 CIFY--VGDALCTISAATCFPEPFISEGRRLGYVHRNFAGNRF-----SDHVALLSVFQA 926
Query: 668 YDPSRIISTTCLSDSAICD---TSLAGIRILWGLCHSLKTVISEAG 710
+D +R+ +++ C+ ++A +R+ W LK ++ AG
Sbjct: 927 WDDARMGGED--AETRFCEHKRLNMATLRMTWEAKVQLKDILVNAG 970
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 214 (80.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 72/234 (30%), Positives = 115/234 (49%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYY-ALEQQWHLMKPLSSFFKV---HI----LHSS 137
++ L+LH+ +KSILVF+P LE L KP+S+F + I LHSS
Sbjct: 881 VVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSS 940
Query: 138 VDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD--VNRKIDS 194
+ +Q + K KV++ATNIAE+S+TI V V+D R Q+ ++ + S
Sbjct: 941 LSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMS 1000
Query: 195 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXI-C 253
E W S++ QR GR GRT G +++ TKS L+D + P I +
Sbjct: 1001 EE--WTSKASCRQRAGRAGRTSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKL 1058
Query: 254 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYG 307
++ + + L +A++PP E + +++ L AL KI+ + + E T G
Sbjct: 1059 FLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDAL-KINQQQQQELTPLG 1111
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 207 (77.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 64/208 (30%), Positives = 105/208 (50%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F VH LHSS+ +E Q + +K K
Sbjct: 43 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVTK 102
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 103 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 162
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T F L + P I I E + + + + + ++PP
Sbjct: 163 TSGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 222
Query: 275 YPEVVGDALDLLDHKRAL---QKISPRG 299
+P+ + + L AL +K++P G
Sbjct: 223 HPDSLRASKIRLRDLGALTPDEKLTPLG 250
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 212 (79.7 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 64/197 (32%), Positives = 96/197 (48%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKI 149
+ + IHK E E +IL FL T A E +W + ++ LH + E+ M +
Sbjct: 511 MAVEIHKTEK--EGTILAFL-TSQA-EVEWACERFVAPSAIALPLHGKLSFEEQFMVFQN 566
Query: 150 CKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 209
RKVI ATNIAE+S+TIP V YVIDS + ++ + ++ VSQS A QR
Sbjct: 567 YPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRA 626
Query: 210 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQK 269
GR GRT G+ YRL +K+ F ++ ++ P I + A+ + +
Sbjct: 627 GRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLG-----VALLRMLALGIDNIAAFE 681
Query: 270 ALDPPYPEVVGDALDLL 286
+D P PE + A+ L
Sbjct: 682 FVDAPVPEAIAMAIQNL 698
Score = 63 (27.2 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 536 KEIRVQYVEDVSG-NQDKAVNGS---ETPGEAPLCVYFINGSCNRGTGCPFSHSLQAKRP 591
KE+R + + V+ ++K+ G E E P+C+ ++ + GC SH L K
Sbjct: 1530 KEMRQEVQKMVNELAREKSALGEKPDEIELECPICLSEVDDGYSL-EGC--SH-LFCK-- 1583
Query: 592 ACKFFYSLQGCRNGDS--CIFSH-DLGQPVLPSSSFTCLPEDGVANAASL-LRLFPTSSD 647
AC RN D+ + SH D G P++ + L ++ + S L F TSSD
Sbjct: 1584 ACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEKLDELISASLSAFVTSSD 1643
Query: 648 GSILLLDDTD 657
G + D
Sbjct: 1644 GKLRFCSTPD 1653
Score = 42 (19.8 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 478 FEHTCLLNCDPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQF--QSN----NVAEKL 531
F+ L DPP D D L KK V +F +SN ++ +
Sbjct: 926 FDFEALYMLDPPPPFDASQMDERRL----RVKKVVGCSSTVLKRFCGKSNRSLLSIVSRA 981
Query: 532 ASIIKEIRVQYVEDVSGNQ 550
S+ + R+ DV N+
Sbjct: 982 RSLCSDERIGIQVDVDQNE 1000
Score = 39 (18.8 bits), Expect = 9.2e-11, Sum P(3) = 9.2e-11
Identities = 4/8 (50%), Positives = 8/8 (100%)
Query: 714 IPWKEVKC 721
+PW+++KC
Sbjct: 1325 LPWQKIKC 1332
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 225 (84.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 71/222 (31%), Positives = 102/222 (45%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ HI E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 588 LIAALIRHIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTV 645
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + K RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 646 NQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 705
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 706 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 765
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 766 A---YFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLG 804
Score = 38 (18.4 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 479 MSATLNAEKFSEYF 492
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 229 (85.7 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 74/235 (31%), Positives = 110/235 (46%)
Query: 74 MANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPLSSFFKV 131
MA K +LI L+ +I ++ ++LVFLP + + Q HL M P +
Sbjct: 616 MAQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGNHRY 673
Query: 132 HIL--HSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
IL HS + E+ + KVIL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 674 QILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTA 733
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX 248
+ + + VW S++ EQR+GR GR G + L +++ F LE H P +
Sbjct: 734 HNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEI 793
Query: 249 XXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR 300
I I L KA++PP + V +A L LD A +++P GR
Sbjct: 794 ALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGR 845
Score = 42 (19.8 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 608 CIFSHDLGQPVLPSSSFTCLPEDGVANAASL 638
CIF +G + S+ TC PE ++ L
Sbjct: 864 CIFY--VGDAICTISAATCFPEPFISEGKRL 892
Score = 38 (18.4 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 646 SDGSILLLDD 655
SDG I+L+DD
Sbjct: 1069 SDGQIVLVDD 1078
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 217 (81.4 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 104/393 (26%), Positives = 155/393 (39%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELL----GVDHG 56
MSAT D + DYF + + +TN R Y +Q+ ++ V H
Sbjct: 270 MSATIDAKELSDYFTTTN-----SIPPVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQ 324
Query: 57 MTSELSSLRYCSGPSPSMA--NAEIKPEVH-KLIHDLVLHIHKNESDIEKSILVFLPTYY 113
E++ Y + + N E K + + +D L ++L+FLP Y
Sbjct: 325 QVPEINKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYG--------AVLIFLPGIY 376
Query: 114 ALE---QQWHLMKPLSSFFKVHILHS-SVDT--EQALMAMKICKSHRKVILATNIAESSV 167
++ + M KV I+ S+ T Q + RK+IL TNIAESS+
Sbjct: 377 EIDTMAENLTCMLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSI 436
Query: 168 TIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS 227
T+P V+YVID C + D S L W S++ QR GR GR G+VYR+V K
Sbjct: 437 TVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKH 496
Query: 228 FFGTLEDHECP--AIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDL 285
F+ E P I + A+ + P +L AL PP + + + L
Sbjct: 497 FY----QREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILL 552
Query: 286 LDHKRALQKISPRGRYEP-----TFYGRXXXXXXXXXXXXXXXXKFGEI-GMLREGILLG 339
L AL ++ G Y+P T++G G I ML E I++
Sbjct: 553 LKEVGALY-LTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLII-LGYIFNMLEEAIIIA 610
Query: 340 ILMDTQPLPILHPFGDDALFAEYTGCYFGGDGN 372
+ T L H G L + Y DG+
Sbjct: 611 AGLSTPGL-FAHEGGRSQLGDSFWMHYIFSDGS 642
Score = 46 (21.3 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 26/99 (26%), Positives = 40/99 (40%)
Query: 470 PTYYDPYEFEHTCLLNCDPPRDMDPLAADNE---HLGPSFEAKKCVAVPFVAPNQFQSNN 526
P +PY EH L+N D D + N+ ++ F K P V+ N+ S
Sbjct: 1252 PDTNEPYFAEHDVLINLDVNILEDDVILINQIRYYIDSVFFNFKEENNPAVSVNERVS-- 1309
Query: 527 VAEKLASIIKEIRVQYVEDVSGNQDKAVNGSETPGEAPL 565
+ +L S+I + + + N A ET E PL
Sbjct: 1310 IYTQLRSLINRLLCKDRRYIERNMSNADFEWETNPELPL 1348
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 181 (68.8 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 40/108 (37%), Positives = 59/108 (54%)
Query: 134 LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
LHS + T Q + + RK+++ATNIAE+S+TI V YVID + + +D I
Sbjct: 4 LHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI 63
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
+ WVS++ A+QR+GR GR G Y L L+D++ P I
Sbjct: 64 STMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEI 111
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 209 (78.6 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 101 IEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSSVDTEQALMAMKICKSHRK 155
++ ++LVFLP + + + + F +++ LHS + +++ RK
Sbjct: 658 VDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYPGKRK 717
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDSC++ + + N + VW S++ QRRGR GR
Sbjct: 718 IIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRV 777
Query: 216 CDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPY 275
G + L +K F L+DH + I ++ + L KAL PP
Sbjct: 778 RAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGE---FLGKALQPPP 834
Query: 276 PEVVGDALDLLDHKRALQK 294
++V ++ +L AL +
Sbjct: 835 YDMVVESEAVLQAMGALDR 853
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 220 (82.5 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 73/243 (30%), Positives = 112/243 (46%)
Query: 65 RYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP 124
RY +G ++ + LI L+ HI E D +ILVFLP + + L+
Sbjct: 434 RYSAGTIDALEMMDDDKVDLDLIAALIRHIVLEEED--GAILVFLPGWDNISTLHDLLMS 491
Query: 125 LSSF----FKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSC 179
F F + LHS + T Q + K RK+++ATNIAE+S+TI V +VID
Sbjct: 492 QVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGG 551
Query: 180 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 239
+ + +D I + WVS++ A+QR+GR GR G Y L L+D++ P
Sbjct: 552 KIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPE 611
Query: 240 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKIS 296
I I + I+ L K +DPP + V A++ L AL ++++
Sbjct: 612 ILRTPLEELCLQIKILKLGGIA---YFLSKLMDPPSRDAVMLAINHLMELNALDRQEELT 668
Query: 297 PRG 299
P G
Sbjct: 669 PLG 671
Score = 38 (18.4 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 346 MSATLNAEKFSEYF 359
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 208 (78.3 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 61/199 (30%), Positives = 97/199 (48%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 163
++L Y +L Q+W ++ PL S V D A + RK IL+TNIA
Sbjct: 395 TVLDAAQAYASLTQRWVVL-PLHSALSVSDQDKVFDVAPAGV--------RKCILSTNIA 445
Query: 164 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 223
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G YRL
Sbjct: 446 ETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRL 505
Query: 224 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 283
+S + + P I + +S ++ DP+ ++PP P V A+
Sbjct: 506 YAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEPPPPASVETAI 560
Query: 284 DLLDHKRAL---QKISPRG 299
L + AL + ++P G
Sbjct: 561 LYLQEQGALDSSEALTPIG 579
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 207 (77.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 626 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 683
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 684 DQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 743
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 744 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 803
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 804 AVE----FLSKAVDSPNIKAVDEAVILL 827
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 67/224 (29%), Positives = 110/224 (49%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSFFKVHIL--HSSV-D 139
LI +++ HI K E ++LVF+ + +L+ Q L KV +L H S+
Sbjct: 564 LIENVLCHIVKGERP--GAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMAS 621
Query: 140 TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 199
+EQ L+ + + RK++LATN+AE+S+TI V YVID ++ + +D W
Sbjct: 622 SEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSW 681
Query: 200 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA 259
+S++ A QRRGR GR G+ Y L + + D++ P + I +
Sbjct: 682 ISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGS 741
Query: 260 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRGR 300
IS+ L +AL PP V +A++ L AL + ++P G+
Sbjct: 742 ISE---FLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGK 782
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 680 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 737
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 738 DQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 797
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 798 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKT 857
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 858 AVE----FLSKAVDSPNIKAVDEAVILL 881
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 680 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 737
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 738 DQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 797
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 798 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKT 857
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 858 AVE----FLSKAVDSPNIKAVDEAVILL 881
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 682 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 739
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 740 DQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 800 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 859
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 860 AVE----FLSKAVDSPNIKAVDEAVILL 883
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 206 (77.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 206 (77.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 206 (77.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 206 (77.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 677 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 734
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 735 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 794
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 795 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 854
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 855 AVE----FLSKAVDSPNIKAVDEAVILL 878
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 206 (77.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 685 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 742
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 743 DQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 802
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 803 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 862
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 863 AVE----FLSKAVDSPNIKAVDEAVILL 886
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 206 (77.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 682 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 739
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 740 DQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 800 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 859
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 860 AVE----FLSKAVDSPNIKAVDEAVILL 883
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 206 (77.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 65/208 (31%), Positives = 100/208 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 682 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 739
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 740 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 799
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 800 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 859
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 860 AVE----FLSKAVDSPNIKAVDEAVILL 883
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 205 (77.2 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 65/213 (30%), Positives = 107/213 (50%)
Query: 89 DLVLHIHKN--ESDIEKSILVFLPTY---YALEQQW-----HLMKPLSSFFKVHILHSSV 138
DL++H+ N S +IL+FLP Y +L + + S ++V +LHS++
Sbjct: 517 DLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNM 576
Query: 139 DTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 197
T +K S RK+IL+TNIAE+S+T+ V +VIDS + + +D + +
Sbjct: 577 QTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKT 636
Query: 198 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAES 257
VW+S++ A QRRGR GR G + L ++ F + + + P + C +
Sbjct: 637 VWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQEL-----CLHT 691
Query: 258 KAISD---PKV-LLQKALDPPYPEVVGDALDLL 286
K ++ P V L KA DPP +V +A+ +L
Sbjct: 692 KLLAPVNCPVVDFLMKAPDPPPALIVRNAIQML 724
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 217 (81.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 73/226 (32%), Positives = 109/226 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL---SSFFKVHILHSSVDT- 140
LI DLVL I + IL FLP + ++ Q L++ L +S + V +HS++
Sbjct: 697 LITDLVLQIDAHGEP--GGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMM 754
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 755 DQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWV 814
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S+S QRRGR GR G Y L +S + ++ P I I E
Sbjct: 815 SKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKT 874
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL------DHKRALQKISPR 298
A+ L KALD P + V +A+ LL D + AL + R
Sbjct: 875 AVE----FLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKR 916
Score = 39 (18.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 649 SILLLDDTDMH 659
++LL+ DTD+H
Sbjct: 1141 AVLLMTDTDIH 1151
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 204 (76.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 66/208 (31%), Positives = 99/208 (47%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHIDARGEP--GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S TI + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S++ QRRGR GR G Y L +S + + P I I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 204 (76.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 66/201 (32%), Positives = 102/201 (50%)
Query: 54 DHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKS-----ILVF 108
D ++ + ++RY S S S+ ++ K+ DLV + + D + S +LVF
Sbjct: 838 DQQLSQQDLTVRY-SNYSKSVVKTLAAMDLDKINMDLVESLLEWIVDGDHSYPPGAVLVF 896
Query: 109 LPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRKVILAT 160
LP ++Q + ++ F V+ LHSS+ E Q + + K+I++T
Sbjct: 897 LPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIIST 956
Query: 161 NIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQV 220
NIAE+SVTI V YVIDS R + +D +R ++S E VWVS++ A QR+GR GR G
Sbjct: 957 NIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVC 1016
Query: 221 YRLVTKSFFGT-LEDHECPAI 240
+ L T F L + P I
Sbjct: 1017 FHLFTSHRFEHHLSQQQLPEI 1037
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 204 (76.9 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 59/206 (28%), Positives = 106/206 (51%)
Query: 103 KSILVFLPTYYALEQ--QWHLMKPLSSF-FKVHILHSSVDTEQALMAMKICKSH-RKVIL 158
K+ILVFLP + + L +P + +H LHSS+ +++ A + RK+++
Sbjct: 920 KAILVFLPGMAEIRRLNDELLSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRKIVI 979
Query: 159 ATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDG 218
ATNIAE+ +TIP + VID+ + + +D R++ ++S++ A+QRRGR GR G
Sbjct: 980 ATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRG 1039
Query: 219 QVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPE 277
+ + TK L + + P + + + + +P +L +ALDPP +
Sbjct: 1040 ICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEV-EPTLL--EALDPPSSK 1096
Query: 278 VVGDALDLLDHKRAL---QKISPRGR 300
+ A+D L +AL + ++P G+
Sbjct: 1097 NIRRAIDALKEVKALTSTENLTPLGQ 1122
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 220 (82.5 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 77/228 (33%), Positives = 113/228 (49%)
Query: 77 AEIKPEVHK--LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL----SSFF 129
A IKPE LI L+ I + D +ILVFLP + + + + L+ S+ F
Sbjct: 550 ATIKPEEVDVGLIVKLMKKICSDSKD--GAILVFLPGWEEISKTKEKLLDDRFFAHSAKF 607
Query: 130 KVHILHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
+ LHS V E Q + + + RK++LATNIAES+VTI V YVIDS R + +D
Sbjct: 608 IILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDP 667
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX 248
+ + + WVS++ A+QR GR GR G Y L +K +L ++ P +
Sbjct: 668 YNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDEL 727
Query: 249 XXXICCAESKAISDPKV----LLQKALDPPYPEVVGDALDLLDHKRAL 292
C + K + DP LQK +DPP + + +AL +L AL
Sbjct: 728 -----CLQVKML-DPNCNVNDFLQKLMDPPVAQSIENALIILKDIGAL 769
Score = 44 (20.5 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 31/136 (22%), Positives = 52/136 (38%)
Query: 405 DHLQQVLKFDETK-VTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFL 463
DHL V F K AS K E+CS +++ Q + + +L + ++R
Sbjct: 848 DHLATVAAFQCWKNAKASGQAK---EFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPS 904
Query: 464 GTSNGLPTYYDPYEFEHTCLLNCDPPRD-MDPLAADNEHLGPSFEAKKCVAVPFVAPNQF 522
+SN +DP + P M PL+ + A V VP ++ N
Sbjct: 905 SSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVD 964
Query: 523 QSNNVAEKLASIIKEI 538
S+ ++ + EI
Sbjct: 965 MSSTKFDEALIVFDEI 980
Score = 40 (19.1 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT D ++ +YF
Sbjct: 374 MSATLDAERFSEYF 387
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 213 (80.0 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 56/169 (33%), Positives = 92/169 (54%)
Query: 126 SSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV 184
+S F++H LHS+V EQ + K+ R++ILA+NIAE+SVTIP V +V+D ++
Sbjct: 910 TSKFRIHFLHSAVSAAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDR 969
Query: 185 FWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXX 244
+D + +I W ++S+A QR+GR GRT +G Y L ++ +++D P +
Sbjct: 970 KYDRSTRITGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLD 1029
Query: 245 XXXXXXXICCAESK-AISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL 292
+ + +++D L A+ PP P VV DA++ L AL
Sbjct: 1030 LTNTCLSVKGFGFRDSVAD---FLAAAISPPPPSVVQDAVNSLKAMDAL 1075
Score = 42 (19.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 400 DKQRLDHLQQVLKFDETKVTASLLPKI 426
D R +HL K++E K+TA+ + ++
Sbjct: 1173 DFARSEHLN-FAKYEEAKLTAAQIEQV 1198
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 198 (74.8 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 62/212 (29%), Positives = 104/212 (49%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 173 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTK 232
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 233 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 292
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T + L + P I I E + + + + + ++PP
Sbjct: 293 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPP 352
Query: 275 YPEVVGDALDLLDHKRALQKISPRGRYEPTFY 306
+ + + + L R L ++P R P Y
Sbjct: 353 HTDSLRASKIRL---RDLGALTPDERLTPLGY 381
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 212 (79.7 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 69/222 (31%), Positives = 102/222 (45%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 476 LIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTV 533
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + + RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 534 NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 593
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 594 SKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 653
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 654 AH---FLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLG 692
Score = 38 (18.4 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 367 MSATLNAEKFSEYF 380
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 211 (79.3 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 68/217 (31%), Positives = 97/217 (44%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALM 145
LI L+ HI E D +ILVFLP W + L ++ S DT +
Sbjct: 468 LIAALIRHIVLEEED--GAILVFLPG-------WDNISTLHDLLMSQVMFKS-DTIGQVF 517
Query: 146 AMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 205
K RK+++ATNIAE+S+TI V YVID + + +D I + WVS++ A
Sbjct: 518 K-KTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANA 576
Query: 206 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKV 265
+QR+GR GR G Y L L+D++ P I I I+
Sbjct: 577 KQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIA---Y 633
Query: 266 LLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
L + +DPP E V ++ L AL K ++P G
Sbjct: 634 FLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLG 670
Score = 38 (18.4 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 359 MSATLNAEKFSEYF 372
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 200 (75.5 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 63/208 (30%), Positives = 104/208 (50%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F VH LHSS+ +E Q + +K K
Sbjct: 845 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVTK 904
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 905 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 964
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T F L + P I I E + + + + + ++PP
Sbjct: 965 ASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 1024
Query: 275 YPEVVGDALDLLDHKRAL---QKISPRG 299
+ + + + L AL +K++P G
Sbjct: 1025 HTDSLRASKIRLRDLGALTPDEKLTPLG 1052
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 183 (69.5 bits), Expect = 8.7e-12, Sum P(3) = 8.7e-12
Identities = 52/156 (33%), Positives = 81/156 (51%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKVI++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 378 RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 437
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+S F L D P I E K + ++ +D
Sbjct: 438 RTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVL-----ELKKLGIDDLVHFDLMD 492
Query: 273 PPYPEVVGDALDLLDHKRALQ---KISPRGRYEPTF 305
PP PE + AL+ L++ L ++P GR F
Sbjct: 493 PPAPETLMRALEELNYLACLDDDGNLTPLGRLASEF 528
Score = 54 (24.1 bits), Expect = 8.7e-12, Sum P(3) = 8.7e-12
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQ 33
MSAT D K++ YF D GR VE+ P Q
Sbjct: 252 MSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQ 290
Score = 54 (24.1 bits), Expect = 8.7e-12, Sum P(3) = 8.7e-12
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 428 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYD 474
++WC H+L SL + +L + R + + TS YY+
Sbjct: 607 KQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDKKYYE 653
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 217 (81.4 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 73/226 (32%), Positives = 109/226 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL---SSFFKVHILHSSVDT- 140
LI DLVL I + IL FLP + ++ Q L++ L +S + V +HS++
Sbjct: 697 LITDLVLQIDAHGEP--GGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMM 754
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 755 DQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWV 814
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX--XXXXXXXXICCAESK 258
S+S QRRGR GR G Y L +S + ++ P I I E
Sbjct: 815 SKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKT 874
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL------DHKRALQKISPR 298
A+ L KALD P + V +A+ LL D + AL + R
Sbjct: 875 AVE----FLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKR 916
Score = 41 (19.5 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLG 52
MSAT D ++ YF D V+ +P ++ + YLE++ LG
Sbjct: 634 MSATGDNQRFSHYFGDC------PVVKVPGF----MYPVKEYYLEEILAKLG 675
Score = 39 (18.8 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 649 SILLLDDTDMH 659
++LL+ DTD+H
Sbjct: 1141 AVLLMTDTDIH 1151
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 198 (74.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/199 (29%), Positives = 97/199 (48%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 163
S+L TY + Q+W ++ PL S V D ++ RK IL+TNIA
Sbjct: 392 SVLEAAQTYASRTQRWVVL-PLHSALSV------ADQDKVFDVAP--PGVRKCILSTNIA 442
Query: 164 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 223
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G +RL
Sbjct: 443 ETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRL 502
Query: 224 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 283
+S + + P I + +S ++ DP+ ++PP P + A+
Sbjct: 503 YAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEPPPPASLETAI 557
Query: 284 DLLDHKRAL---QKISPRG 299
L + AL + ++P G
Sbjct: 558 LYLQDQGALDSSEALTPIG 576
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 198 (74.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 59/199 (29%), Positives = 97/199 (48%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 163
S+L TY + Q+W ++ PL S V D ++ RK IL+TNIA
Sbjct: 397 SVLEAAQTYASRTQRWVVL-PLHSALSV------ADQDKVFDVAP--PGVRKCILSTNIA 447
Query: 164 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 223
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G +RL
Sbjct: 448 ETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRL 507
Query: 224 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 283
+S + + P I + +S ++ DP+ ++PP P + A+
Sbjct: 508 YAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEPPPPASLETAI 562
Query: 284 DLLDHKRAL---QKISPRG 299
L + AL + ++P G
Sbjct: 563 LYLQDQGALDSSEALTPIG 581
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 198 (74.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 62/212 (29%), Positives = 104/212 (49%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 849 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTK 908
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 909 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 968
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T + L + P I I E + + + + + ++PP
Sbjct: 969 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPP 1028
Query: 275 YPEVVGDALDLLDHKRALQKISPRGRYEPTFY 306
+ + + + L R L ++P R P Y
Sbjct: 1029 HTDSLRASKIRL---RDLGALTPDERLTPLGY 1057
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 73/266 (27%), Positives = 127/266 (47%)
Query: 41 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 94
V LE + L + G E SSL + +G S + E+ H K+ DL++H+
Sbjct: 555 VDLLESYSASL--EFGNLDE-SSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 95 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 145
N +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 612 LYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKK 671
Query: 146 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 204
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 672 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 731
Query: 205 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 264
A QR+GR GR G +RL ++ F + + + P + C +K ++
Sbjct: 732 AVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL-----CLHTKLLAPVN 786
Query: 265 V----LLQKALDPPYPEVVGDALDLL 286
L KA +PP +V +A+ +L
Sbjct: 787 CPIADFLMKAPEPPPALIVRNAVQML 812
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 215 (80.7 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 466 LIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTV 523
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + K RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 524 NQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 583
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 584 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 643
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 644 A---YFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLG 682
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 357 MSATLNAEKFSEYF 370
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 403 RLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 454
R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 745 RSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 800
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 192 (72.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK IL+TNIAE+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR G
Sbjct: 349 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 408
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G +RL +S + + P I + +S ++ DP+ ++P
Sbjct: 409 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQM---KSMSVGDPRTF--PFIEP 463
Query: 274 PYPEVVGDALDLLDHKRAL---QKISPRG 299
P P + A+ L + AL + ++P G
Sbjct: 464 PPPASLETAILYLRDQGALDSSEALTPIG 492
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 197 (74.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 56/183 (30%), Positives = 93/183 (50%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 844 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVTK 903
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 904 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 963
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T F L + P I I E + + + + + ++PP
Sbjct: 964 ASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEPP 1023
Query: 275 YPE 277
+ +
Sbjct: 1024 HAD 1026
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 209 (78.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 59/157 (37%), Positives = 87/157 (55%)
Query: 79 IKPEVHKLIHDLVLHIHKNESDI--EKSILVFLPTYYALEQQWH-------LMKPLSSFF 129
I PE LI ++ +I + D E +IL+FLP + + Q H L P + F
Sbjct: 730 INPE---LIESVLKYIVEGSHDWPREGTILIFLPGFGEI-QSVHDSLLDNALFSPRAGKF 785
Query: 130 KVHILHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
+ LHS++ E QAL+ K RK++L+TNIAE+SVTI +V+D + +D
Sbjct: 786 ILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDS 845
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVT 225
NR ++S +LVWVS++ A+QR+GR GR G L T
Sbjct: 846 NRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYT 882
Score = 39 (18.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTEL 50
MSAT + + DYF G G VL IP RT F + +LE + E+
Sbjct: 615 MSATLNAALFSDYF---G-G--APVLDIPG---RT-FPVQQLFLEDILEM 654
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 214 (80.4 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 467 LIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 524
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + K RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 525 NQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 584
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 585 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 644
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 645 A---YFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLG 683
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 358 MSATLNAEKFSEYF 371
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 403 RLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 454
R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 746 RSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 801
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 209 (78.6 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 69/222 (31%), Positives = 102/222 (45%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 388 LIVALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 445
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + + RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 446 NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 505
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 506 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 565
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 566 A---YFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLG 604
Score = 39 (18.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 399 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 454
KD R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 664 KDT-RSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 722
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 279 MSATLNAEKFSEYF 292
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 204 (76.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 61/201 (30%), Positives = 104/201 (51%)
Query: 84 HKLIHDLVLHIHKN--ESDIEKSILVFLPTYYALEQQWHLM--KPLSSFFKVHILHSSVD 139
+ L+ +V ++HK ++ SI+VFLP + + +L+ K + F V LHS++
Sbjct: 843 YDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMVLPLHSALT 902
Query: 140 TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV- 198
E K RKV+++TNIAE+S+TI ID+ R+ +F+ N K ++ +L+
Sbjct: 903 PEDQKRVFKKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFY--NPKDNTTKLIE 960
Query: 199 -WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAE 256
++S+++ +QRRGR GR +G Y+L +K+ + + P I + +
Sbjct: 961 SFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSV---K 1017
Query: 257 SKAISDPKVLLQKALD-PPYP 276
+ I D K L ALD PP P
Sbjct: 1018 AMGIKDVKAFLSTALDAPPLP 1038
Score = 44 (20.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 718 EVKCVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTRVIITMNNIKFA 773
E K + ++ E Y + LE KT + + + + L L TR I +++ F+
Sbjct: 1240 EAKMIKYWIRSEEYQDKLEEYKTKISQETQKVDLEDLP--LPATRAFIHPSSVLFS 1293
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 194 (73.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 58/199 (29%), Positives = 97/199 (48%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 163
++L TY + Q+W ++ PL S V D ++ RK IL+TNIA
Sbjct: 393 AVLEAAQTYASHTQRWVVL-PLHSALSV------ADQDKVFDVAP--PGVRKCILSTNIA 443
Query: 164 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 223
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G +RL
Sbjct: 444 ETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRL 503
Query: 224 VTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDAL 283
+S + + P I + +S ++ DP+ ++PP P + A+
Sbjct: 504 YAESDYDAFAPYPVPEIRRVALDSLVLQM---KSMSVGDPRTF--PFIEPPPPASLETAI 558
Query: 284 DLLDHKRAL---QKISPRG 299
L + AL + ++P G
Sbjct: 559 LYLRDQGALDSSEALTPIG 577
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 194 (73.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 70/221 (31%), Positives = 113/221 (51%)
Query: 89 DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHIL--HSSVDTE 141
D V+ IH NE + ILVFL ++ ++ K L S ++ IL +S++ +E
Sbjct: 680 DCVIDIHINEGPGD--ILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSE 737
Query: 142 -QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q+ + K RKV+ ATNIAE+S+TI + YV+D + ++ I+ + +
Sbjct: 738 IQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPI 797
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKS-FFGTLEDHECPAIXXXXXXXXXXXICCAESKA 259
SQ+QA QR+GR GRT G+ YRL T+S F+ + ++ P I I ++
Sbjct: 798 SQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHT---ILMLKAMG 854
Query: 260 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR 300
I+D +L +DPP ++ +AL L H LQ + G+
Sbjct: 855 IND--LLKFDFMDPPPKNLMLNALTELYH---LQSLDDEGK 890
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 198 (74.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 65/181 (35%), Positives = 90/181 (49%)
Query: 130 KVHILHSSVD-TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
KV ++ S+ T+Q + K RKV+LATNIAE+S+TIP + YVID C ++V W
Sbjct: 294 KVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVID-CGYVKVKW-Y 351
Query: 189 NRKI--DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXX 246
N K DS +V VS++ A QR GR GR G+VYRL TKS + L + P +
Sbjct: 352 NPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELS 411
Query: 247 XXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRY-EPTF 305
+ KA+ +L D P P + L L+ AL I +G +P
Sbjct: 412 GAILQL-----KALGIGNIL---RFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVG 463
Query: 306 Y 306
Y
Sbjct: 464 Y 464
Score = 41 (19.5 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 428 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEFEHTC 482
+E+C ++L+ +L L E ++ R K+ G+P + + E C
Sbjct: 547 KEFCGQYFLIYRNLKRAHSLREQLITVA---RKKY-----GIPIFSCKGDVEKLC 593
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 204 (76.9 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 70/229 (30%), Positives = 110/229 (48%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF------FKVHILHSSVDT--E 141
L+ HI NE+ E +ILVFLP + + L+ F F + LHS + T +
Sbjct: 492 LIRHIAVNEN--EGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQ 549
Query: 142 QALMAM--KICKSH----RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSA 195
++++ ++ K RK+++ATNIAE+S+TI V YVID + + +D I +
Sbjct: 550 TQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTM 609
Query: 196 ELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCA 255
WVS + A+QR+GR GR G+ Y L L++++ P I C
Sbjct: 610 TAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEEL-----CL 664
Query: 256 ESKAIS-DP-KVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRG 299
+ K + P LQK +DPP + A+ L AL +K++P G
Sbjct: 665 QIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLG 713
Score = 47 (21.6 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 397 VFKDKQRLDHLQQV---LKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILN 453
+F R DHL V L +++ K S + E E+C ++L ++L + +
Sbjct: 770 MFSQNSRSDHLSIVNAFLGWEDAKRQGS---RFEREYCWDNFLSANTLQMLQNMKGQF-- 824
Query: 454 AVHRFRPKFLGTSN 467
A H R F+ + +
Sbjct: 825 AEHLLRAGFVNSKD 838
Score = 38 (18.4 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLG 52
MSAT + K+ YF + ++ IP F LE V ELLG
Sbjct: 378 MSATLNAEKFSKYFNNC------PMIHIPGYT----FPVTEYLLEDVVELLG 419
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 190 (71.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 66/205 (32%), Positives = 99/205 (48%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALE--------QQWHLMKPLSSFFKVHILHSSVDTEQ 142
VL +H+NE D + ILVFL +E + HL + L S + TEQ
Sbjct: 237 VLDVHENEPDGD--ILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLP-LFSGLSTEQ 293
Query: 143 ALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVS 201
+ + ++ RKVI +TNIAE+SVTI + YV+DS ++ I++ V +S
Sbjct: 294 QMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPIS 353
Query: 202 QSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
++ A QR GR GRT G+ +RL T+ + +L D P + + KA+
Sbjct: 354 KAAAAQRAGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQL-----KALG 408
Query: 262 DPKVLLQKALDPPYPEVVGDALDLL 286
VL L PP E++ AL+LL
Sbjct: 409 IDNVLHFDFLTPPPAELMTKALELL 433
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 192 (72.6 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK IL+TNIAE+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR G
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G +RL +S + + P I + +S ++ DP+ ++P
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEP 548
Query: 274 PYPEVVGDALDLLDHKRAL---QKISPRG 299
P P + A+ L + AL + ++P G
Sbjct: 549 PPPTSLETAILYLRDQGALDSSEALTPIG 577
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 193 (73.0 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 80/307 (26%), Positives = 142/307 (46%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSE 60
MSAT D + YF + G RV + I RT F YL+ V + G
Sbjct: 796 MSATLDSATFASYF--VQDGIRVGQVEIAG---RT-FPVTDYYLDDVIRM--TQFGT--- 844
Query: 61 LSSLRYCSGP-SPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKS--ILVFLPTYYALEQ 117
+++R + P + ++ N + + L+ + I S +KS IL+FLP + +
Sbjct: 845 -ANIRADADPVAKAIQNLGTRINYNLLV-ETTEAIDNELSLAQKSGGILIFLPGVAEINR 902
Query: 118 QWHLMKPLSSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVI 176
+++ L+ V LH+S++T EQ + + RKV++ATN+AE+S+TI + V+
Sbjct: 903 ACGMLRSLNCLH-VLPLHASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVV 961
Query: 177 DSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHE 236
D+ + + +D + E + S + +QRRGR GR G+ Y+L T+ + +
Sbjct: 962 DTGKVKETSYDAANNMRRLEETFASLAACKQRRGRAGRVQAGECYKLYTRKLESQMAERP 1021
Query: 237 CPAIXXXXXXXXXXXICCA-ESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL--Q 293
P + +C + + I+D + L +A PP V A+ +L L +
Sbjct: 1022 EPEMRRVPLEQ----LCLSVRAMGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGE 1077
Query: 294 KISPRGR 300
+++ GR
Sbjct: 1078 ELTALGR 1084
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 192 (72.6 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 51/154 (33%), Positives = 78/154 (50%)
Query: 151 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRG 210
K R V++ATN+AE+S+TIP + YV+D+ R +D ++S E+ W+SQ+ A QR G
Sbjct: 670 KEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAG 729
Query: 211 RTGRTCDGQVYRLVTKSFFGTL-EDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQK 269
R GRT G YRL + + F + E+ P I + K+++ PKV
Sbjct: 730 RAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLM-----KSMNIPKVENFP 784
Query: 270 ALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP 303
PP P + +A L +AL+ + G P
Sbjct: 785 FPTPPEPSAIREAERCL---KALEALDSNGGLTP 815
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 188 (71.2 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 58/167 (34%), Positives = 86/167 (51%)
Query: 82 EVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMK------PLSSF-FKVHIL 134
++H + H I+K E + ILVFL +E L+ P+ S V +
Sbjct: 277 QIH-IAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPI 335
Query: 135 HSSVDTEQALMAM-KICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKID 193
S++ EQ + K K RKVILATNIAE+S+TI + YV+DS ++ ID
Sbjct: 336 FSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGID 395
Query: 194 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
S ++ +S++ A+QR GR GR +G+ YRL T+ F L+ P I
Sbjct: 396 SLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEI 442
Score = 50 (22.7 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 405 DHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDIL 452
DH+ + F E + + P+ +++WC H++ S+ V ++E ++
Sbjct: 563 DHITFLNVFREFQKSK---PQQQQQWCFDHFINLKSMIKVLNVFEQLV 607
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 209 (78.6 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 69/222 (31%), Positives = 102/222 (45%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 474 LIVALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 531
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + + RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 532 NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 591
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P I I I
Sbjct: 592 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 651
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 652 A---YFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLG 690
Score = 39 (18.8 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 399 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 454
KD R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 750 KDT-RSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 808
Score = 38 (18.4 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 365 MSATLNAEKFSEYF 378
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 191 (72.3 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 62/215 (28%), Positives = 102/215 (47%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSFFKVHIL--HSSVDT 140
LI ++ HI + E ++LVFL + +L Q L +V +L H S+ T
Sbjct: 525 LIEAVLCHICRKERP--GAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMAT 582
Query: 141 -EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 199
EQ L+ + + RK++LATN+AE+S+TI V +V+D ++ + +D W
Sbjct: 583 AEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSW 642
Query: 200 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA 259
+SQ+ A QRRGR GR G+ Y L K + +++ P + I + ++
Sbjct: 643 ISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVES 702
Query: 260 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK 294
I++ L AL P V +A+ L AL +
Sbjct: 703 IAE---FLSAALQAPESLAVQNAIGFLKMIGALDE 734
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 190 (71.9 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 49/149 (32%), Positives = 72/149 (48%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK+++ATNIAE+S+TI V YVID + + +D I + WVS++ A+QR+GR G
Sbjct: 516 RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG 575
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
R G Y L L+D++ P I I I+ L + +DP
Sbjct: 576 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIA---YFLSRLMDP 632
Query: 274 PYPEVVGDALDLLDHKRALQK---ISPRG 299
P E V ++ L AL K ++P G
Sbjct: 633 PSNEAVSLSIKHLMELNALDKQEELTPLG 661
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 190 (71.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 77/227 (33%), Positives = 113/227 (49%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQ-QWHLM---KPLSSFFKVHI---LHSSVDTE-Q 142
++ IH + + ILVFL +E Q LM K L S K I +++++ ++ Q
Sbjct: 564 IMQIHLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQ 622
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + K RKV+LATNIAE+SVTI + YVID S Q +D ++ +V +S+
Sbjct: 623 AKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR GR GRT G+ +RL T ++ LE+ P I + +S I
Sbjct: 683 AAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNV---VLMLKSLGIH 739
Query: 262 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 308
D ++ LDPP E + AL+ L AL ++ RG E T GR
Sbjct: 740 D--LVHFDFLDPPPQETLVIALEQL---YALGALNHRG--ELTKLGR 779
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 190 (71.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 77/227 (33%), Positives = 113/227 (49%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQ-QWHLM---KPLSSFFKVHI---LHSSVDTE-Q 142
++ IH + + ILVFL +E Q LM K L S K I +++++ ++ Q
Sbjct: 564 IMQIHLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQ 622
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + K RKV+LATNIAE+SVTI + YVID S Q +D ++ +V +S+
Sbjct: 623 AKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK 682
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR GR GRT G+ +RL T ++ LE+ P I + +S I
Sbjct: 683 AAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNV---VLMLKSLGIH 739
Query: 262 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 308
D ++ LDPP E + AL+ L AL ++ RG E T GR
Sbjct: 740 D--LVHFDFLDPPPQETLVIALEQL---YALGALNHRG--ELTKLGR 779
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 204 (76.9 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 76/264 (28%), Positives = 128/264 (48%)
Query: 41 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 94
V LE + L + G E SSL SG S + E+ H K+ DL++H+
Sbjct: 555 VDLLESYSASL--EFGNLDE-SSLVQTSGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 95 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 145
N S +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 612 LYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKK 671
Query: 146 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 204
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 672 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 731
Query: 205 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX--XXXICCAESKAISD 262
A QR+GR GR G +RL ++ F + + + P + + + AI+D
Sbjct: 732 AIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIAD 791
Query: 263 PKVLLQKALDPPYPEVVGDALDLL 286
L KA +PP +V +A+ +L
Sbjct: 792 ---FLMKAPEPPPALIVRNAVQML 812
Score = 40 (19.1 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 407 LQQVLKFDETKVTASLLPKIEEEWCSL 433
L + L F ASLL ++ ++W SL
Sbjct: 1106 LDEWLSFKLEPEAASLLLQLRQKWHSL 1132
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 187 (70.9 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 131
P+ K D V+ IH+ E D + IL FL T ++ EQ L + + +V
Sbjct: 255 PDYIKATVDTVVKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRV 312
Query: 132 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVID-CGFMKLRAYNPR 371
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ +V VSQ+ A QR GR GR G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVV 431
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDSVLRFHFMSPPPAQSMVQALELL 463
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 208 SATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 44 (20.5 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L + + + + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKM--SSEGDP 603
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 187 (70.9 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 131
P+ K D V+ IH+ E D + IL FL T ++ EQ L + + +V
Sbjct: 255 PDYIKATVDTVVKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRV 312
Query: 132 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVID-CGFMKLRAYNPR 371
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ +V VSQ+ A QR GR GR G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVV 431
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDSVLRFHFMSPPPAQSMVQALELL 463
Score = 46 (21.3 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 208 SATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 44 (20.5 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L + + + + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKM--SSEGDP 603
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 193 (73.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 51/136 (37%), Positives = 71/136 (52%)
Query: 151 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRG 210
K RK+IL+TNI E+S+TI + YVIDS Q ++ N I+S + S++ QR G
Sbjct: 800 KIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTG 859
Query: 211 RTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKA 270
R GR DG+ +RL TK F L D+ P I I +S + D ++
Sbjct: 860 RAGRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSM---ILLLKSLGMDD--IINFDF 914
Query: 271 LDPPYPEVVGDALDLL 286
LDPP P V+ L+LL
Sbjct: 915 LDPPSPIVIIKGLELL 930
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALE 116
L +HI + + DI LVFLP Y +E
Sbjct: 638 LQIHITQGKGDI----LVFLPGQYEIE 660
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 193 (73.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 51/136 (37%), Positives = 71/136 (52%)
Query: 151 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRG 210
K RK+IL+TNI E+S+TI + YVIDS Q ++ N I+S + S++ QR G
Sbjct: 800 KIRRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTG 859
Query: 211 RTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKA 270
R GR DG+ +RL TK F L D+ P I I +S + D ++
Sbjct: 860 RAGRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSM---ILLLKSLGMDD--IINFDF 914
Query: 271 LDPPYPEVVGDALDLL 286
LDPP P V+ L+LL
Sbjct: 915 LDPPSPIVIIKGLELL 930
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALE 116
L +HI + + DI LVFLP Y +E
Sbjct: 638 LQIHITQGKGDI----LVFLPGQYEIE 660
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 201 (75.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 69/225 (30%), Positives = 108/225 (48%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSFFKVHIL--HSSVDT 140
LI L+ +I +NE IL+FL + +L+++ + + V +L H S++T
Sbjct: 484 LIEFLLCNICENEGP--GGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMET 541
Query: 141 -EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 199
EQ L+ + RK++LATNIAE+S+TI VA+VID ++ + +D W
Sbjct: 542 FEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSW 601
Query: 200 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKA 259
+S+ A+QRRGR GR GQ Y L K + +++ P I I +
Sbjct: 602 ISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGS 661
Query: 260 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRGRY 301
IS+ L +AL P V A+ L AL + ++ GRY
Sbjct: 662 ISE---FLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRY 703
Score = 37 (18.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTEL 50
MSAT D + YF G V+ IP + R +LE + E+
Sbjct: 375 MSATLDAELFSSYFGGAG------VIYIPGFT----YPVRSHFLEDILEM 414
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 174 (66.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 370 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAG 429
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ F L + P I E K + ++ +D
Sbjct: 430 RTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVL-----ELKKLGIDDLVHFDFMD 484
Query: 273 PPYPEVVGDALDLLDHKRALQ---KISPRGRYEPTF 305
PP PE + AL+ L++ L ++P GR F
Sbjct: 485 PPAPETMMRALEELNYLACLDDEGNLTPLGRLASQF 520
Score = 57 (25.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYD 474
+WC HYL SL + + ++R+ + T P Y+D
Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFD 646
Score = 47 (21.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 1 MSATADITKYRDYFRD 16
MSAT D K++ YF D
Sbjct: 246 MSATLDAEKFQRYFND 261
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 186 (70.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHI-- 133
P+ K + V+ IH+ E D + IL FL +E ++ + L + K H+
Sbjct: 255 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 134 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVI 431
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 45 (20.9 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK--KSSEGDP 603
Score = 45 (20.9 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 208 SATLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQ 251
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 184 (69.8 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 65/217 (29%), Positives = 107/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLSSF-FKVHI-- 133
P+ K + V+ IH+ E D + IL FL +E ++ + L K H+
Sbjct: 255 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRI 312
Query: 134 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVI 431
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 46 (21.3 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 208 SATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 45 (20.9 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK--KSSEGDP 603
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 185 (70.2 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
R ++ATN+AE+S+TIP + YV+D + + ++D + S + WVSQ+ A+QR GR G
Sbjct: 607 RLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAG 666
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G YRL + + FG E P I + KA++ KV+ P
Sbjct: 667 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLIL-----QMKALNIEKVINFPFPTP 721
Query: 274 PYPEVVGDALDLLDHKRALQ 293
P E + A +LL ALQ
Sbjct: 722 PSVEALIAAEELLIALGALQ 741
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 184 (69.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
R ++ATN+AE+S+TIP + YV+D + + ++D + S + WVSQ+ A+QR GR G
Sbjct: 401 RLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAG 460
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G YRL + + FG E P I + KA++ KV+ P
Sbjct: 461 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLIL-----QMKALNVEKVINFPFPTP 515
Query: 274 PYPEVVGDALDLLDHKRALQ 293
P E + A +LL ALQ
Sbjct: 516 PSVEALLAAEELLIALGALQ 535
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 201 (75.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 67/229 (29%), Positives = 113/229 (49%)
Query: 88 HDLVLHIHK---NESD--IEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSS 137
+ L++++ K E D K +LVFLP + + L++ + F F +++LHS+
Sbjct: 884 YGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHST 943
Query: 138 VDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 196
+ + Q I K RK++L+TNIAE+ VTIP V VID+ ++ ++ R +
Sbjct: 944 LSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLT 1003
Query: 197 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCA 255
+VS++ A+QR GR GR +G Y L +K T ++ P I +
Sbjct: 1004 DTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMC 1063
Query: 256 ESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL---QKISPRGRY 301
+ + D +L KALDPP + AL+ L AL +K++ G++
Sbjct: 1064 QMGDVQD---VLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKF 1109
Score = 37 (18.1 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVD 54
MSAT + K++ YF E ++ IP +T R YLE + G D
Sbjct: 789 MSATLNAEKFQLYF------EGSNLITIPG---KTYPVHRF-YLEDILSQFGND 832
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 184 (69.8 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 131
P+ K + V+ IH+ E D + +L FL T ++ EQ L + + +V
Sbjct: 224 PDYIKSTVETVVKIHQTEGDGD--VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 281
Query: 132 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 282 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 340
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 341 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVI 400
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 401 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 432
Score = 46 (21.3 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 177 SATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 220
Score = 43 (20.2 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+ +WC H+L L + + E + + +F+ P+ +S G P
Sbjct: 530 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPR--KSSEGDP 572
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 182 (69.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 71/226 (31%), Positives = 108/226 (47%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLM-KPLSSF---FKVHI----------LH 135
+ L IH NE E ILVFL +E+ L+ K S ++VH L+
Sbjct: 211 VTLDIHLNEP--EGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLY 268
Query: 136 SSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDS 194
S+ T+Q + + K RK +++TNIA +S+TI V YV+DS Q+ + +D
Sbjct: 269 GSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDI 328
Query: 195 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXIC 253
E+V +S+S+A QR GR GRT G+ YRL + F+ + DH P I +
Sbjct: 329 LEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLK 388
Query: 254 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRG 299
C ++ D V+ LD P + +AL L A+ + + RG
Sbjct: 389 CL---SVHD--VIRFPYLDRPEERHILEALKQLYQCDAIDR-TRRG 428
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 195 (73.7 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 46/112 (41%), Positives = 68/112 (60%)
Query: 130 KVHILHSSV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
K+ L+SS+ + +Q ++ + + RKVIL+TNIAE+SVTIP + YVIDS + ++DV
Sbjct: 401 KILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDV 460
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
NR + + +S+ A QR GR GR GQVYR+ TK + + P I
Sbjct: 461 NRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Score = 42 (19.8 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIP-STNQRTIF--QRRVS-Y-LEQVTELLGVDH 55
MSAT DI + +F + ++ IP ++ TI+ +R + Y L V+ +L +
Sbjct: 176 MSATFDINIFNQFFNN------PPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIHF 229
Query: 56 GMTS 59
G TS
Sbjct: 230 GNTS 233
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 94 IHKNESDIEKSILVFLPTYYALEQQWHLMKP-LSSFFKVHILH 135
I K E ILVFLP +E ++K L +K ++L+
Sbjct: 308 IKKTEDKSLGDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLN 350
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 195 (73.7 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 46/112 (41%), Positives = 68/112 (60%)
Query: 130 KVHILHSSV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
K+ L+SS+ + +Q ++ + + RKVIL+TNIAE+SVTIP + YVIDS + ++DV
Sbjct: 401 KILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDV 460
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
NR + + +S+ A QR GR GR GQVYR+ TK + + P I
Sbjct: 461 NRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Score = 42 (19.8 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIP-STNQRTIF--QRRVS-Y-LEQVTELLGVDH 55
MSAT DI + +F + ++ IP ++ TI+ +R + Y L V+ +L +
Sbjct: 176 MSATFDINIFNQFFNN------PPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIHF 229
Query: 56 GMTS 59
G TS
Sbjct: 230 GNTS 233
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 94 IHKNESDIEKSILVFLPTYYALEQQWHLMKP-LSSFFKVHILH 135
I K E ILVFLP +E ++K L +K ++L+
Sbjct: 308 IKKTEDKSLGDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLN 350
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 184 (69.8 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 131
P+ K + V+ IH+ E D + +L FL T ++ EQ L + + +V
Sbjct: 255 PDYIKSTVETVVKIHQTEGDGD--VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 132 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVI 431
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 46 (21.3 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 208 SATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 43 (20.2 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+ +WC H+L L + + E + + +F+ P+ +S G P
Sbjct: 561 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPR--KSSEGDP 603
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 180 (68.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 64/227 (28%), Positives = 112/227 (49%)
Query: 66 YCSGPSPSMANAEIKP--EVHKLIHDL-VLHIHKNESDIEKSILVFLPTYYALEQQWHLM 122
Y P P + ++ ++H++ +D +L + ++E + + + AL + +
Sbjct: 249 YIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTG-MR 307
Query: 123 KPLSSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 181
K L +V +++ + + +Q + ++ +S RKVI+ATN+AE+S+TI +AYVID C
Sbjct: 308 KHL----RVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVID-CGF 362
Query: 182 LQV-FWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHE-CPA 239
+++ ++ I+ +V VS++ A QR GR GR G+ YRL T T ED E P
Sbjct: 363 VKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYT----ATEEDFEKLPQ 418
Query: 240 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL L PP + + AL+LL
Sbjct: 419 STVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELL 465
Score = 51 (23.0 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F G+ + ++ T + F + Y++
Sbjct: 208 SATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQ 251
Score = 43 (20.2 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L S + E + + F+ PK +S G P
Sbjct: 565 QWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPK--KSSEGDP 605
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 202 (76.2 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 68/218 (31%), Positives = 102/218 (46%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKI 149
+ + IHK E E +IL FL T A E +W + ++ LH + E+ +
Sbjct: 514 MAVEIHKTEK--EGTILAFL-TSQA-EVEWACERFITPSAIALPLHGKLSFEEQFRVFQN 569
Query: 150 CKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 209
RKVI ATNIAE+S+TIP V YVIDS + ++ + ++ VSQS A QR
Sbjct: 570 HPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRA 629
Query: 210 GRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQK 269
GR GRT G+ YRL +K+ F ++ ++ P I + A+ +
Sbjct: 630 GRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLG-----VALLRMLALGVNNIAEFN 684
Query: 270 ALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYG 307
+D P PE + A+ L A+ + G +E T G
Sbjct: 685 FVDAPVPEAIAMAVQNLVQLGAV--VEKNGVHELTQEG 720
Score = 53 (23.7 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 1 MSATADITKYRDYFRDLG------RGERVEVLAIPS-TNQRTIFQRRVSYLEQVTELLGV 53
MSATAD + YF G R VE++ PS T + ++ SY+ V ++
Sbjct: 458 MSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVE 517
Query: 54 DHGMTSELSSLRY 66
H E + L +
Sbjct: 518 IHKTEKEGTILAF 530
Score = 40 (19.1 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 693 RILWGLCHSLKTVISEAGDNPIPWKEVKC 721
R+ + +L+ + E +PW+++KC
Sbjct: 1307 RLHFEAAKALQELNGEVLPGCLPWQKIKC 1335
Score = 37 (18.1 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 20/80 (25%), Positives = 31/80 (38%)
Query: 477 EFEHTCLLNCDPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQF--QSN----NVAEK 530
+FE +L DPP D D L KK V +F +SN ++ +
Sbjct: 930 DFEALYML--DPPPPFDVSQMDERRL----RIKKVVGCSSTVLKRFCGKSNRSLLSIVSR 983
Query: 531 LASIIKEIRVQYVEDVSGNQ 550
S+ + R+ DV N+
Sbjct: 984 ARSLCSDERIGIQVDVDQNE 1003
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 184 (69.8 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 47/149 (31%), Positives = 78/149 (52%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK IL+TNIAE+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR G
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G +RL +S + + P I + +S ++ DP+ ++P
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEP 548
Query: 274 PYPEVVGDALDLLDHKRAL---QKISPRG 299
P + A+ L + AL + ++P G
Sbjct: 549 PPAASLETAILYLRDQGALDGSEALTPIG 577
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 184 (69.8 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
R ++ATN+AE+S+TIP + YV+D + + ++D + S + WVSQ+ A+QR GR G
Sbjct: 614 RLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAG 673
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G YRL + + FG E P I + KA++ KV+ P
Sbjct: 674 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLIL-----QMKALNVEKVINFPFPTP 728
Query: 274 PYPEVVGDALDLLDHKRALQ 293
P E + A +LL ALQ
Sbjct: 729 PSVEALLAAEELLIALGALQ 748
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 185 (70.2 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 73/299 (24%), Positives = 138/299 (46%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQ--RTIF-QRRVSYLEQVTELLGVDHGM 57
+ ++ + K+ F G +R+ L + +T R V Y Q+ ++ VD
Sbjct: 548 LGISSGLAKFTP-FGGFGEKQRISTLLEKKFKEELKTALPDRTVYYHPQMNDV--VDK-- 602
Query: 58 TSELSSLRYCSGPSPSMA-NAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALE 116
++ S LR+ G ++ + V ++ D V+ + +S + +ILVFLP Y ++
Sbjct: 603 -TDFSKLRF--GEKYNLFYGSSSNNSVDYVLLDQVIQ-YLADSPVFGTILVFLPGYEDIQ 658
Query: 117 QQ------W-HLMKPLSSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVT 168
Q W + +K + + V LHS + + + + K RK+ILATNIAE+S+T
Sbjct: 659 QMLKAIDCWKNSLKNMKNVI-VLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASIT 717
Query: 169 IPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSF 228
I V +V+D+ + + +D K+ + + +++S A+QR GR GR +G RL T+
Sbjct: 718 IEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQE 777
Query: 229 FGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLD 287
+ ++ + + + K + + L A +PP E + A+ L+
Sbjct: 778 YNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISE-FLSLAPEPPEKESILQAITFLE 835
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 197 (74.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 74/266 (27%), Positives = 128/266 (48%)
Query: 41 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 94
V LE + L + G E SSL + +G S + E+ H K+ DL++H+
Sbjct: 556 VDLLESYSASL--EFGNLDE-SSLVHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 612
Query: 95 HKNESD-IEK-SILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 145
N K +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 613 LYNICHGCHKCAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKK 672
Query: 146 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 204
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 673 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 732
Query: 205 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 264
A QR+GR GR G +RL ++ F + + + P + C +K ++
Sbjct: 733 AVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL-----CLHTKLLAPVN 787
Query: 265 V----LLQKALDPPYPEVVGDALDLL 286
L KA +PP +V +A+ +L
Sbjct: 788 CPIADFLMKAPEPPPALIVRNAVQML 813
Score = 40 (19.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 407 LQQVLKFDETKVTASLLPKIEEEWCSL 433
L + L F ASLL ++ ++W SL
Sbjct: 1053 LDEWLNFKLDPEAASLLLQLRQKWHSL 1079
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 182 (69.1 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 57/166 (34%), Positives = 91/166 (54%)
Query: 76 NAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALE------QQWHLMKPLSSFF 129
+AE + V +I ++ I+ NE E +L FLP ++ +Q P +
Sbjct: 366 DAESEDIVDTMIRSII-QINLNEP--EGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPL 422
Query: 130 KVHI-LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS-CRSLQVFW 186
V + L++++ +Q+ + K+ K RKVILATNIAE+S+T+ V YVIDS R ++V W
Sbjct: 423 IVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKV-W 481
Query: 187 DVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL 232
N + + +SQ+ A QR GR GR +G+V+RL +S + L
Sbjct: 482 KHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMAL 527
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 184 (69.8 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLP------TYYAL--EQQWHLMKP-LSSFFKV 131
P+ K + V+ IH+ E D + +L FL T ++ EQ L + + +V
Sbjct: 255 PDYIKSTVETVVKIHQTEGDGD--VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 132 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVI 431
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 46 (21.3 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 208 SATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 43 (20.2 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+ +WC H+L L + + E + + +F+ P+ +S G P
Sbjct: 561 DSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPR--KSSEGDP 603
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 181 (68.8 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 67/212 (31%), Positives = 95/212 (44%)
Query: 105 ILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTEQALMA-MKICKSHRKV 156
ILVFL +E L+K S ++ L +S+ EQ L + +HRKV
Sbjct: 307 ILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKV 366
Query: 157 ILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI--DSAELVWVSQSQAEQRRGRTGR 214
+L+TNIAE+SVTI + YVID+ L N K+ +S + +SQS A QR GR GR
Sbjct: 367 VLSTNIAETSVTISGIRYVIDT--GLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGR 424
Query: 215 TCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
GQ YR+ T++ F L P I + KA V+ +DPP
Sbjct: 425 EAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTL-----KARGQNDVINFHYMDPP 479
Query: 275 YPEVVGDALDLLDHKRALQKISPRGRYEPTFY 306
E + L L+H ++ + G Y
Sbjct: 480 SKEGL---LRALEHLYSIGALDDNGHINDLGY 508
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 185 (70.2 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 53/152 (34%), Positives = 84/152 (55%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK++LATNIAE+S+TI ++YVID Q ++ ++S +V S++ A+QR GR G
Sbjct: 502 RKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAG 561
Query: 214 RTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
R G+ +RL TK SF+ L+ ++ P I + S I+D +L + +D
Sbjct: 562 RVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLL---SLGIND--LLGFEFMD 616
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEPT 304
PP E + AL+LL AL ++ +G+ T
Sbjct: 617 PPSKEAIIKALNLL---YALGALNTQGKLTKT 645
Score = 47 (21.6 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 362 YTGCYFGGD--GNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRL-DHLQQVLKFDETKV 418
+T C D NT+ + ++ M N + F++ KDK+ L D +Q +F++ +
Sbjct: 658 FTKCILTSDKFDNTKQIIS---IIAMLNESSNLFYRP--KDKKELADKRKQ--EFNDLQG 710
Query: 419 TASLLPKIEEEWCSLHYLVQ---------SSLHHVSELYEDIL 452
+L KI ++W Y VQ ++ + +YE ++
Sbjct: 711 DQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLI 753
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 183 (69.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 55/166 (33%), Positives = 84/166 (50%)
Query: 131 VHIL--HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+H+L +S + E QA + + R ++ATN+AE+S+TIP + YV+D + + +D
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXX 247
+ S + WVSQ+ A+QR GR GRT G YRL + + FG E + P I
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEITRRPVED 705
Query: 248 XXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ 293
+ KA++ KV+ PP E + A +LL ALQ
Sbjct: 706 LIL-----QMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 746
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 196 (74.1 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 74/264 (28%), Positives = 127/264 (48%)
Query: 41 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 94
V LE + L + G E SSL +G S + E+ H K+ DL++H+
Sbjct: 571 VDLLESYSASL--EFGNLDE-SSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 627
Query: 95 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 145
N S +IL+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 628 LYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKK 687
Query: 146 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 204
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 688 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 747
Query: 205 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX--XXXICCAESKAISD 262
A QR+GR GR G +RL ++ F + + + P + + + I+D
Sbjct: 748 AIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIAD 807
Query: 263 PKVLLQKALDPPYPEVVGDALDLL 286
L KA +PP +V +A+ +L
Sbjct: 808 ---FLMKAPEPPPALIVRNAVQML 828
Score = 40 (19.1 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 407 LQQVLKFDETKVTASLLPKIEEEWCSL 433
L + L F ASLL ++ ++W SL
Sbjct: 1122 LDEWLNFKLEPEAASLLLQLRQKWHSL 1148
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 179 (68.1 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 45/140 (32%), Positives = 79/140 (56%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK +++TNIAE+S+TI V +VID S Q ++ +++S + +S++ A QR GR G
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T++ +G+ ++D P I + K + ++ +D
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQL-----KKLGTEDLVHFDFMD 473
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ +A+
Sbjct: 474 PPAPETLMRALELLNYLQAI 493
Score = 50 (22.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQ--RRVSYLEQVTELLG 52
MSAT D K++ YF D GR VE+ P+ + + R V + V E+ G
Sbjct: 235 MSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEG 294
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 179 (68.1 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 45/140 (32%), Positives = 79/140 (56%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK +++TNIAE+S+TI V +VID S Q ++ +++S + +S++ A QR GR G
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T++ +G+ ++D P I + K + ++ +D
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQL-----KKLGTEDLVHFDFMD 473
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ +A+
Sbjct: 474 PPAPETLMRALELLNYLQAI 493
Score = 50 (22.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQ--RRVSYLEQVTELLG 52
MSAT D K++ YF D GR VE+ P+ + + R V + V E+ G
Sbjct: 235 MSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEG 294
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 193 (73.0 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 134 LHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
LHS++ Q I RK I++TNIAE+SVTI V +V+DS + ++ +D K+
Sbjct: 413 LHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKM 472
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXI 252
+ W+S++ +EQR+GR GRT G YRL ++S + + P I I
Sbjct: 473 QRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSL---I 529
Query: 253 CCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK 294
+S + DP+ +DPP + A+ L + AL +
Sbjct: 530 LQMKSMGLGDPRTFT--FIDPPPASSIQTAVTYLREQGALDE 569
Score = 40 (19.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 1 MSATADITKYRDYFRD 16
MSAT +I + YF D
Sbjct: 310 MSATINIKLFSSYFND 325
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 180 (68.4 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 64/217 (29%), Positives = 107/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHI-- 133
P+ K + V+ IH+ E D + IL FL +E ++ + L + K H+
Sbjct: 247 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 304
Query: 134 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 305 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 363
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ + VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 364 TTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVI 423
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 424 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 455
Score = 46 (21.3 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 200 SATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQ 243
Score = 45 (20.9 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 555 QWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPK--KSSEGDP 595
Score = 39 (18.8 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 515 PFVAPNQFQSNNV--AEKLASIIKEIRVQYVEDVSGNQ 550
P A +S N ++++ SI +++Q + V GNQ
Sbjct: 482 PMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQ 519
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 193 (73.0 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 60/213 (28%), Positives = 104/213 (48%)
Query: 89 DLVLHIHKN--ESDIEKSILVFLPTY--------YALEQQWHLMKPLSSFFKVHILHSSV 138
DL++H+ N S ++L+FLP Y L S ++V +LHS++
Sbjct: 327 DLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHSRYQVFMLHSNM 386
Query: 139 DTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 197
T +K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++
Sbjct: 387 QTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKM 446
Query: 198 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAES 257
VW+S++ A QR+GR GR G +RL ++ F + + + P + C +
Sbjct: 447 VWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL-----CLHT 501
Query: 258 KAISDPKV----LLQKALDPPYPEVVGDALDLL 286
K ++ L KA +PP +V +A+ +L
Sbjct: 502 KLLAPVNCPIADFLMKAPEPPPALIVRNAVQML 534
Score = 40 (19.1 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 407 LQQVLKFDETKVTASLLPKIEEEWCSL 433
L + L F ASLL ++ ++W SL
Sbjct: 828 LDEWLSFKLEPEAASLLLQLRQKWHSL 854
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 180 (68.4 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 64/217 (29%), Positives = 107/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHI-- 133
P+ K + V+ IH+ E D + IL FL +E ++ + L + K H+
Sbjct: 255 PDYIKSTVETVMKIHQTEGDGD--ILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRV 312
Query: 134 --LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID C +++ ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVID-CGFVKLRAYNPR 371
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+ + VSQ+ A QR GR GR+ G+ YRL T+ F L P +
Sbjct: 372 TTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVI 431
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL + PP + + AL+LL
Sbjct: 432 LQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL 463
Score = 46 (21.3 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLE 45
SAT D K+RD+F + + T + F + YL+
Sbjct: 208 SATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 45 (20.9 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L + + E + + +F+ PK +S G P
Sbjct: 563 QWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPK--KSSEGDP 603
Score = 39 (18.8 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 515 PFVAPNQFQSNNV--AEKLASIIKEIRVQYVEDVSGNQ 550
P A +S N ++++ SI +++Q + V GNQ
Sbjct: 490 PMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQ 527
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 196 (74.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 73/266 (27%), Positives = 127/266 (47%)
Query: 41 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 94
V LE + L + G E SSL +G S + E+ H K+ DL++H+
Sbjct: 556 VDLLESYSATL--EFGNLDE-SSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 612
Query: 95 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 145
N S ++L+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 613 LYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKK 672
Query: 146 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 204
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 673 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 732
Query: 205 AEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPK 264
A QR+GR GR G +RL ++ F + + + P + C +K ++
Sbjct: 733 AIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL-----CLHTKLLAPVN 787
Query: 265 V----LLQKALDPPYPEVVGDALDLL 286
L KA +PP +V +A+ +L
Sbjct: 788 CPIADFLMKAPEPPPALIVRNAVQML 813
Score = 39 (18.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 407 LQQVLKFDETKVTASLLPKIEEEWCSL 433
L + L F ASLL ++ ++W SL
Sbjct: 1107 LDEWLHFTLEPEAASLLLQLRQKWHSL 1133
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 166 (63.5 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 42/108 (38%), Positives = 63/108 (58%)
Query: 134 LHSSVDTEQALMAMKICKS-HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
+ S++ +EQ + + RKVILATNIAE+S+TIP + YVID +D ++ +
Sbjct: 330 IFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGM 389
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
+S ++V S++Q QR GR GR G+ +RL + F LED P I
Sbjct: 390 ESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEI 437
Score = 62 (26.9 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 423 LPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHR 457
+ KI ++WC +Y+ SL H ++Y I V +
Sbjct: 586 IDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQ 620
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 194 (73.4 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 801 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTK 860
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D + ++S E +VSQ+ A QR+GR GR
Sbjct: 861 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 920
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T + L + P I I E + + + + + ++PP
Sbjct: 921 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 980
Query: 275 YPEVVGDALDLLDHKRAL---QKISPRG 299
+ + + + L AL +K++P G
Sbjct: 981 HVDSLRASKVRLRDLGALTPDEKLTPLG 1008
Score = 39 (18.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 388 LCAFQFWQHVFKDKQRLDH 406
LCA++ WQ K+ R +
Sbjct: 1077 LCAYKGWQLSTKESARASY 1095
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 178 (67.7 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 53/158 (33%), Positives = 80/158 (50%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTEQA 143
V IH E + ILVFL +E+ L++ ++ + L + E
Sbjct: 369 VFKIHCGEP-LPGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIKALPLFGQLSMEAQ 427
Query: 144 LMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + K RKV+LATNIAE+SVT+P V YVID+ +S + + ++S + +S+
Sbjct: 428 HTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESLLVDAISK 487
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
S A QR GR GR G+ YRL T+ + + D + P I
Sbjct: 488 SSAIQRAGRAGREAPGKCYRLYTEDVYKEMRDADLPEI 525
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 194 (73.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 61/208 (29%), Positives = 103/208 (49%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 854 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTK 913
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D + ++S E +VSQ+ A QR+GR GR
Sbjct: 914 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 973
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T + L + P I I E + + + + + ++PP
Sbjct: 974 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 1033
Query: 275 YPEVVGDALDLLDHKRAL---QKISPRG 299
+ + + + L AL +K++P G
Sbjct: 1034 HVDSLRASKVRLRDLGALTPDEKLTPLG 1061
Score = 39 (18.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 388 LCAFQFWQHVFKDKQRLDH 406
LCA++ WQ K+ R +
Sbjct: 1130 LCAYKGWQLSTKESARASY 1148
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 193 (73.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
++LVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 851 AVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTK 910
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D + ++S E +VSQ+ A QR+GR GR
Sbjct: 911 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 970
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L T + L + P I I E + + + + + ++PP
Sbjct: 971 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 1030
Query: 275 YPEVVGDALDLLDHKRAL---QKISPRG 299
+ + + + L AL +K++P G
Sbjct: 1031 HIDSLRASKVRLRDLGALTPDEKLTPLG 1058
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 388 LCAFQFWQHVFKDKQRLDH 406
LCA++ WQ K+ R +
Sbjct: 1127 LCAYKGWQLSTKESARASY 1145
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 196 (74.1 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 65/217 (29%), Positives = 95/217 (43%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALM 145
LI L+ +I E D +ILVFLP W + L ++ S Q
Sbjct: 474 LIVALIRYIVLEEED--GAILVFLPG-------WDNISTLHDLLMSQVMFKSGTMSQVFK 524
Query: 146 AMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 205
+ RK+++ATNIAE+S+TI V YVID + + +D I + WVS++ A
Sbjct: 525 --RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANA 582
Query: 206 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKV 265
+QR+GR GR G Y L L+D++ P I I I+
Sbjct: 583 KQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIA---Y 639
Query: 266 LLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
L + +DPP E V ++ L AL K ++P G
Sbjct: 640 FLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLG 676
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 399 KDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSL---HHVS-ELYEDILNA 454
KD R DHL V F+ + + E+++C ++L ++L H++ + E +L A
Sbjct: 736 KDT-RSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGA 794
Score = 38 (18.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+ +YF
Sbjct: 365 MSATLNAEKFSEYF 378
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 178 (67.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 57/174 (32%), Positives = 86/174 (49%)
Query: 123 KPLSSFFKVHIL--HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSC 179
KP +S +H+L +S + E QA + + R ++ATN+AE+S+TIP + YV+D
Sbjct: 575 KPDASL-PLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCG 633
Query: 180 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPA 239
+ + +D + S + WVSQ+ A+QR GR GRT G YRL + + F E P
Sbjct: 634 KVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPE 693
Query: 240 IXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ 293
I + KA++ KV+ PP E + A +LL ALQ
Sbjct: 694 ITRRPVEDLIL-----QMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 742
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 183 (69.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 38/109 (34%), Positives = 62/109 (56%)
Query: 134 LHSSVDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
L+S + TE + + HR I+ATN+AE+S+TIP + YV+D ++ + ++ +
Sbjct: 707 LYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSV 766
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAI 240
E+ W+S++ A+QR GR GRT G YRL + + F + H P I
Sbjct: 767 QKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEI 815
Score = 46 (21.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 458
+ ++C +YL + +L V+ L + I+ + R+
Sbjct: 986 KRKFCKENYLREKALEEVTNLRKQIIGLLKRY 1017
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 179 (68.1 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 64/217 (29%), Positives = 108/217 (49%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLSSF-FKVHI-- 133
P+ K + VL IH+ E D + +L FL +E+ L+ + LS + K H+
Sbjct: 245 PDYVKATVETVLKIHETEDDGD--VLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCV 302
Query: 134 --LHSSVD-TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVN 189
+++ + EQ + ++ + RKV++ATNIAE+S+TI V +VID C +++ ++
Sbjct: 303 LPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVID-CAFVKIRAYNPR 361
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
I+S + +S++ A QR GR GR G+ +RL T+ F L + P +
Sbjct: 362 TAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVI 421
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ KA+ VL L PP + + AL+LL
Sbjct: 422 LQL-----KALGIDNVLRFSFLSPPPAQSMVQALELL 453
Score = 47 (21.6 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLP 470
+WC H+L L + + E + + +++F+ P+ +S G P
Sbjct: 553 QWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRT--SSEGDP 593
Score = 40 (19.1 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 2 SATADITKYRDYF 14
SAT D K++D+F
Sbjct: 198 SATLDAKKFQDFF 210
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVL 436
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 183 (69.5 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 42/114 (36%), Positives = 67/114 (58%)
Query: 123 KPLSSFFKVHILHSSVDTEQALMAMKICK-SHRKVILATNIAESSVTIPKVAYVIDSCRS 181
KP F V L+S++ T + + + R V++ATN+AE+S+TIP + YV+D+ R
Sbjct: 841 KPAGPLF-VLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRV 899
Query: 182 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDH 235
Q +++ + I S E+ W S++ A+QR GR GRT G YR+ + + F DH
Sbjct: 900 KQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFN---DH 950
Score = 56 (24.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 394 WQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYL---VQSSLHHVSELYED 450
W H K+ L L+ V +D ++ S PK + +CS ++L S +H + +
Sbjct: 1113 WLH--KESDLLSILKVVGAYDY-QIRKS--PKDIDHFCSQNFLNTKSMSEIHKLRHQLTE 1167
Query: 451 ILNAVHRFRPKFLGTSNGLPTYYDP 475
I+N++++ + SN + T +P
Sbjct: 1168 IVNSINQTNHELDPISNPIITLVNP 1192
Score = 39 (18.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 76 NAEIKPEVHKLIHDLVLHIHKNESDIEKSILVF 108
N K E+ K+ +N+++I+ S LV+
Sbjct: 677 NKSFKVEIDKINQQFKSDDQENQNNIKSSNLVY 709
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 174 (66.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 181 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 239
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 240 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 299
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 300 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 359
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 360 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 390
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 184 (69.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 49/147 (33%), Positives = 73/147 (49%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
R ++ATN+AE+S+TIP + YV+D + + F+D + S + W+SQ+ A QR GR G
Sbjct: 603 RLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRVTWISQASANQRAGRAG 662
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G YRL + + F E P I + KA++ KV+ P
Sbjct: 663 RTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLIL-----QMKALNIEKVINFPFPTP 717
Query: 274 PYPEVVGDALDLLDHKRALQKISPRGR 300
P E + A +LL AL++ GR
Sbjct: 718 PPTEALAAAEELLIALGALKEPPMTGR 744
Score = 44 (20.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 645 SSDGSILLLDDTDMHFSANLACLYDPSRIISTTCLSDSAICDTSLAGIRILWG-LCHSLK 703
+ GS+ L D + A AC Y S C ++ + ++ IR L G L ++
Sbjct: 833 AGQGSLQKLGDLMVMLGAVGACEY--SGCTPKFC-EENGLRYKAMLEIRRLRGQLTTAVN 889
Query: 704 TVISEAGDNPIPWKEVKCVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTR 762
+V ++AG P ++K P E+ + L ++ ++ +HLA R+ A+ L D +
Sbjct: 890 SVCTDAGLYVDP--KMK-----PPTEAQATYL--RQIVLAGLGDHLARRVQAEELLDDK 939
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 181 (68.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 382 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 441
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 442 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 496
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 497 PPAPETLMRALELLNYLAAL 516
Score = 42 (19.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 258 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 309
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 176 (67.0 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 47/140 (33%), Positives = 77/140 (55%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK++++TNIAE+S+TI + YVID + Q ++ +++S + +S++ A QR GR G
Sbjct: 342 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 401
Query: 214 RTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T KSF L+ P I + + I D ++ +D
Sbjct: 402 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL---KKLGIDD--LVHFDFMD 456
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL++L++ AL
Sbjct: 457 PPAPETLMRALEVLNYLGAL 476
Score = 45 (20.9 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 1 MSATADITKYRDYF 14
MSAT + K++DYF
Sbjct: 218 MSATLEAEKFQDYF 231
Score = 45 (20.9 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 473
+ WC +++ ++ + + ++ + RF K T YY
Sbjct: 567 DPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYY 613
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 174 (66.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 174 (66.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 174 (66.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 174 (66.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 258 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 437 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 467
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 181 (68.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 389 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 448
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 449 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 503
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 504 PPAPETLMRALELLNYLAAL 523
Score = 42 (19.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 265 MSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 316
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 176 (67.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 48/147 (32%), Positives = 72/147 (48%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
R ++ATN+AE+S+TIP + YV+D R + F+D + S ++ W+SQ+ A QR GR G
Sbjct: 606 RLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAG 665
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDP 273
RT G YRL + + FG + K ++ KV+ P
Sbjct: 666 RTEPGHCYRLYSSAVFGDFS-----LFSEAEITRRPVEDLVLQMKDLNIEKVVNFPFPTP 720
Query: 274 PYPEVVGDALDLLDHKRALQKISPRGR 300
P E + A +LL AL+K + GR
Sbjct: 721 PSSEALIAAEELLISLGALEKPARHGR 747
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 342
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 342
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 342
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 342
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 342
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 47/140 (33%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P I + + I D ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL---KKLGIDD--LVHFDFMD 529
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 530 PPAPETLMRALELLNYLAAL 549
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 342
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 174 (66.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 75 ANAEIKPEVH--KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVH 132
A ++ ++H ++ D+++ + + +IEKS + +++ + + +
Sbjct: 336 AIVKVTMDIHLNEMAGDILVFL-TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 394
Query: 133 ILHSSVDTEQAL-MAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRK 191
+ S+ T+Q + + RK +++TNI+ +S+TI + YV+D Q+ +
Sbjct: 395 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 454
Query: 192 IDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXX 250
+D E+V +S+S+A QR GR GRT G+ +R+ +K F+ + DH P I
Sbjct: 455 LDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 514
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 286
+ C AI D V+ LDPP ++ +AL L
Sbjct: 515 TLKCL---AIHD--VIRFPYLDPPNERLILEALKQL 545
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 176 (67.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 59/208 (28%), Positives = 101/208 (48%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTE-QALMAMKICKSHRK 155
++L+FLP ++ + ++ + F H LHSS+ +E Q + ++ K
Sbjct: 842 AVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIK 901
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+SVTI V YVIDS + + +D ++ ++S E +VS++ A QR+GR GR
Sbjct: 902 IIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRV 961
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPP 274
G + L + + L + P I I E + +L + ++PP
Sbjct: 962 ASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPP 1021
Query: 275 YPEVV-GDALDLLD--HKRALQKISPRG 299
E + L L D A +K++P G
Sbjct: 1022 RTESLRASKLRLQDLGALTADEKLTPLG 1049
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 171 (65.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 52/156 (33%), Positives = 82/156 (52%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKVI++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 373 RKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAG 432
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ F L + P I E K + ++ +D
Sbjct: 433 RTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVL-----ELKKLGIDDLVHFDFMD 487
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 308
PP PE + AL+ L++ LQ +S G + T GR
Sbjct: 488 PPAPETMMRALEELNY---LQCLSDEG--DLTALGR 518
Score = 51 (23.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVD 54
MSAT D K+++YF + GR VE+ P FQR YL+ +
Sbjct: 247 MSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPE------FQR--DYLDAAIRTVLQI 298
Query: 55 HGMTSELSSLRYCSG 69
H E L + +G
Sbjct: 299 HATEGEGDILLFLTG 313
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 181 (68.8 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 48/140 (34%), Positives = 80/140 (57%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 348 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAG 407
Query: 214 RTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T K+F ++D+ P I + + I D ++ +D
Sbjct: 408 RTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQL---KKLGIDD--LVHFDFMD 462
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+LL++ AL
Sbjct: 463 PPAPETLMRALELLNYLAAL 482
Score = 45 (20.9 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQV 47
MSAT D K++ YF + GR VE+ P +R + + + Q+
Sbjct: 224 MSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEP-ERDYLEAAIRTVIQI 275
Score = 38 (18.4 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 9/47 (19%), Positives = 18/47 (38%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 473
+ WC +++ SL + + + + RF + T YY
Sbjct: 573 DPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYY 619
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 175 (66.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 59/201 (29%), Positives = 97/201 (48%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALEQQWHL----MKPLSSFFKVHIL--HSSVDTEQ- 142
L +H+ + DI LVF+ +E L +K L+ K+ IL +S + EQ
Sbjct: 388 LAIHVSQGPGDI----LVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQQ 443
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + + RKVI+ATNIAE+S+T+ + +V+DS S ++ +D+ ++ +SQ
Sbjct: 444 AKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQ 503
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+ A QR GR GRT G+ YRL T+ + + I + +S + D
Sbjct: 504 ANANQRSGRAGRTGPGKAYRLYTEVAYKN--EMYLQTIPEIQRTSLSNTVLLLKSLGVKD 561
Query: 263 PKVLLQKALDPPYPEVVGDAL 283
+L +DPP E + +L
Sbjct: 562 --LLDFDFMDPPPQETISTSL 580
Score = 48 (22.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 428 EEWCSLHYLVQSSLHHVSELYEDILNAV 455
+ WC+ H+L +L E+ D LN +
Sbjct: 682 DHWCTKHFLHAKTLRRAKEV-RDQLNDI 708
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 182 (69.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 76/261 (29%), Positives = 122/261 (46%)
Query: 66 YCS--GPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLM- 122
+C+ GP ++ +K EV K+ L +H NE+ ILVFL +E+ L+
Sbjct: 206 FCNLIGPKDKESSVYVK-EVVKM----TLDVHTNEA--AGDILVFLTGQSEIEKACDLLF 258
Query: 123 ---KPLSSFFKVH----------ILHSSVDTEQALMAMKIC-KSHRKVILATNIAESSVT 168
+ L + VH L+ S+ T+Q + K RK ++ATNIA +S+T
Sbjct: 259 EKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLT 318
Query: 169 IPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSF 228
I + Y++DS Q+ + +D E+V +S+S+A+QR GR GRT G+ +R+ +K F
Sbjct: 319 IDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDF 378
Query: 229 FGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLD 287
+ T + ++ P I + C + D V+ LD P + AL L
Sbjct: 379 WDTCMPEYTIPEIQRTSLTSVILTLKCL---GVHD--VIRFPYLDCPEERFILTALKQLY 433
Query: 288 HKRALQKISPRGRYEPTFYGR 308
A+ + RG E T GR
Sbjct: 434 QYDAIDR---RG--EVTKLGR 449
Score = 38 (18.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 709 AGDNPIPWKEVKCVLWYPSLESYSENLESQKTLMQ 743
A +NP W + + W ++S + ++ L++
Sbjct: 530 ASENPSAWCKENWIHWRAVKSAFSVETQLREILLR 564
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 168 (64.2 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK I+ATNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 386 RKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAG 445
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T++ F L + P I E K + ++ +D
Sbjct: 446 RTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTIL-----ELKKLGVDDLVHFDFMD 500
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL+ L++ L
Sbjct: 501 PPAPETMMRALEELNYLSCL 520
Score = 58 (25.5 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPS-TNQRTIF---QRRVSYLE-QVTELLGVDH 55
MSAT D K++ YF + +LA+P T+ IF + Y+E V +L + H
Sbjct: 260 MSATLDAAKFQRYFFE------APILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQI-H 312
Query: 56 GMTSELSSLRYCSGPSP-SMANAEIKPEVHKLIHD 89
+E L + +G +++ EV +LI D
Sbjct: 313 ATEAEGDILLFLTGEEEIEDVCRKVRLEVDELIRD 347
Score = 39 (18.8 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 729 ESYSENLESQKTLMQNFFEHLAIRMLADALYDT 761
++Y N+ ++ L+ FF +A+R + +Y T
Sbjct: 658 KNYYTNI--RRCLVAGFFMQVALRETSGKVYHT 688
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 171 (65.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 45/134 (33%), Positives = 71/134 (52%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK +++TNI+ +S+TI + YV+D Q+ + +D E+V +S+S+A QR GR G
Sbjct: 291 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 350
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +R+ +K F+ + DH P I + C AI D V+ LD
Sbjct: 351 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCL---AIHD--VIRFPYLD 405
Query: 273 PPYPEVVGDALDLL 286
PP ++ +AL L
Sbjct: 406 PPNERLILEALKQL 419
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 181 (68.8 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 69/226 (30%), Positives = 109/226 (48%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALE----QQWHL--MKPLSSFFKVHI-LHSSVDTEQA 143
V ++H E + ILVFL +E Q L P S+ + + L++++ E+
Sbjct: 370 VKYVHLTEPK-GRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQ 428
Query: 144 LMAM-KICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A K + RKVI++TNIAE+SVTIP + VIDS + ++ +ID ++ VS+
Sbjct: 429 KEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSK 488
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA+QR GR GR G+ YRL ++ F E P I + + +
Sbjct: 489 AQAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFLELM---KLGMKN 545
Query: 263 PKVLLQKALDPPYPEVVGDALDLLDHKRALQKI-SPRGRYEPTFYG 307
P L K +DPP + + AL L A++ + S R ++ T G
Sbjct: 546 PHRL--KLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMG 589
Score = 39 (18.8 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1 MSATADITKYRDYFRDL------GRGERVEVLAI-PSTNQ 33
MSAT K++ YF + GR +EV + P N+
Sbjct: 316 MSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINK 355
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 191 (72.3 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 66/214 (30%), Positives = 109/214 (50%)
Query: 91 VLHIHKNESDIEKSILVFLP---TYYALEQQW-HLMKPLSSFFKVHIL---HSSVDTE-Q 142
VL IH E +LVFLP A+E+ H ++ L + + I+ ++++ +E Q
Sbjct: 603 VLTIHVKEP--LGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQ 660
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + + RKV+LATNIAE+S+TI + YV+D S ++ ++S + +S+
Sbjct: 661 AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISK 720
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR GR GRT G+ YRL T +++ LED+ P I + K++
Sbjct: 721 ASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSL-----KSLG 775
Query: 262 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKI 295
+L +DPP E + +L+LL AL ++
Sbjct: 776 IHNLLNFDFMDPPPSEALIKSLELLFALGALNQL 809
Score = 38 (18.4 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 2 SATADITKYRDYF 14
SAT D K+ D+F
Sbjct: 556 SATMDAEKFSDFF 568
Score = 38 (18.4 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYE 449
AS L ++ W H LV +S ++ ++ E
Sbjct: 979 ASGLSQVLPRWVVYHQLVLTSKEYMRQVTE 1008
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 182 (69.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 42/97 (43%), Positives = 61/97 (62%)
Query: 134 LHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
L+S + T EQ + K + R I+ATN+AE+S+TIP V YV+DS RS + ++ + +
Sbjct: 734 LYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGV 793
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 229
S E+ WVS++ A QR GR GRT G YRL + + F
Sbjct: 794 QSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVF 830
Score = 42 (19.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 397 VFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSEL 447
+F D ++ + ++ V A+ P IE+ C ++ S L+++ E+
Sbjct: 1099 LFPDDAKITNRTSIINIPYIPVLATRTPNIED--CFVYIHPTSILNNLGEM 1147
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 182 (69.1 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 65/212 (30%), Positives = 103/212 (48%)
Query: 91 VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHIL---HSSVDTE-Q 142
VL IH E E ILVFL A + + MK L I+ +S++ +E Q
Sbjct: 714 VLQIHLTEP--EGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQ 771
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
+ + RKV++ATNIAE+S+TI + YV+D + Q ++ + ++S + +SQ
Sbjct: 772 SRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQ 831
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+ A+QR GR GRT G+ YRL T+S + +E P + KA+
Sbjct: 832 ASAKQRAGRAGRTGPGKCYRLYTESAYR----NEMPPTSIPEIQRINLGMTTLTMKAMGI 887
Query: 263 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK 294
+L +DPP P+ + A++ L AL +
Sbjct: 888 NDLLSFDFMDPPQPQALISAMEQLYSLGALDE 919
Score = 41 (19.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 5/30 (16%), Positives = 17/30 (56%)
Query: 430 WCSLHYLVQSSLHHVSELYEDILNAVHRFR 459
WC +++ SL ++ + +L+ + +++
Sbjct: 1011 WCFENFIQSRSLRRAQDVRKQLLSIMDKYK 1040
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 176 (67.0 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 47/140 (33%), Positives = 77/140 (55%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK++++TNIAE+S+TI + YVID + Q ++ +++S + +S++ A QR GR G
Sbjct: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 405
Query: 214 RTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T KSF L+ P I + + I D ++ +D
Sbjct: 406 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTL---KKLGIDD--LVHFDFMD 460
Query: 273 PPYPEVVGDALDLLDHKRAL 292
PP PE + AL++L++ AL
Sbjct: 461 PPAPETLMRALEVLNYLGAL 480
Score = 44 (20.5 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 427 EEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 473
+ WC +++ ++ + + ++ + RF K T YY
Sbjct: 571 DPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYY 617
Score = 41 (19.5 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 1 MSATADITKYRDYF 14
MSAT + K+++YF
Sbjct: 222 MSATLEAEKFQEYF 235
Score = 37 (18.1 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 730 SYSENLESQKTLMQNFFEHLAIRMLADALYDTRV-IITMNNIK 771
+Y +N E +NF + A++ AD + V I++ N+K
Sbjct: 564 AYKQNNEDPNWCFENFVNNRAMKS-ADNVRQQLVRIMSRFNLK 605
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 173 (66.0 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 352 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 411
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ F L + P I E K + ++ +D
Sbjct: 412 RTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVL-----ELKKLGIDDLVHFDYMD 466
Query: 273 PPYPEVVGDALDLLDHKRALQK---ISPRGRYEPTF 305
PP PE + AL+ L++ L ++P GR F
Sbjct: 467 PPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEF 502
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 1 MSATADITKYRDYFRD 16
MSAT D K++ YF D
Sbjct: 228 MSATLDAKKFQKYFFD 243
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 9/45 (20%), Positives = 18/45 (40%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYY 473
+WC H+L +L + + + + R + + T YY
Sbjct: 579 DWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYY 623
Score = 37 (18.1 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 519 PNQFQSNNVAEKLASIIKEIRVQY 542
PN F N A KLA E+R Q+
Sbjct: 534 PNVFVRPNSARKLAD---EMRQQF 554
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 170 (64.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 71/221 (32%), Positives = 109/221 (49%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLM----KPLS-SFFKVHIL--HSSVDTE-Q 142
V+ IH +E + ILVFL ++ ++ K L S ++ IL +S++ +E Q
Sbjct: 710 VMQIHLSEGPGD--ILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQ 767
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
+ + RKV++ATNIAE+S+TI + YV+D Q +D +DS + +SQ
Sbjct: 768 SRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQ 827
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA QR GR GRT G+ YRL T+S + E P I I ++ I+D
Sbjct: 828 AQARQRSGRAGRTGPGKCYRLYTESAYRN-EMLPSP-IPEIQRQNLSHTILMLKAMGIND 885
Query: 263 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRGR 300
+L +DPP + + AL L AL ++P GR
Sbjct: 886 --LLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGR 924
Score = 51 (23.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 6/35 (17%), Positives = 17/35 (48%)
Query: 425 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR 459
+ + WC HY+ + ++ + ++ + R+R
Sbjct: 1002 RCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYR 1036
Score = 44 (20.5 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 378 GRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLV 437
GRK +I+ LC+ F +D + V + +L EW H L+
Sbjct: 1043 GRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELI 1102
Query: 438 QSS---LHHVS 445
Q+S +H VS
Sbjct: 1103 QTSKEYMHTVS 1113
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 169 (64.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 37/97 (38%), Positives = 59/97 (60%)
Query: 134 LHSSVDTEQALMAMKICKSHRKV-ILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
L+S + T+Q + + ++ I+ATN+AE+S+TIP + YV+D RS + ++ +
Sbjct: 776 LYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGV 835
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 229
S E+ WVS++ A QR GR GRT G YRL + + F
Sbjct: 836 QSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVF 872
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 174 (66.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 41/115 (35%), Positives = 68/115 (59%)
Query: 130 KVHIL--HSSVDTEQALMAMKICKS-HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFW 186
++H+L +S + T++ L + R V+LATN+AE+S+TIP + YV DS RS + +
Sbjct: 674 RMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKY 733
Query: 187 DVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAI 240
D + S E+ W+S++ A QR GR GRT G +RL + + + L++ P +
Sbjct: 734 DQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPEL 788
Score = 46 (21.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 428 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKF 462
E+WC H++ L +L + I+ + P F
Sbjct: 955 EKWCESHFVRFKVLKEAQKLRQQIVQLLKTNIPSF 989
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 52/159 (32%), Positives = 81/159 (50%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMK-------PLSSFFKVHILHSSVDTEQA 143
V IH E E IL+FL +E L+ P S L++ + T+Q
Sbjct: 237 VFDIHLQEG--EGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQ 294
Query: 144 LMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVNRKIDSAELVWVS 201
+ + + RKV+++TNIAE+SVTI + YV+D C ++ +D + I++ V +S
Sbjct: 295 MYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVD-CGFAKLRAYDPSTGIETLTAVPIS 353
Query: 202 QSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
++ A QR GR GRT G+ +RL T+ + L D P I
Sbjct: 354 KAAAVQRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEI 392
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 168 (64.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 58/202 (28%), Positives = 93/202 (46%)
Query: 51 LGVDH-GMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVL---HIHKNESDIEKSIL 106
+ +DH G + Y G + + K E IH +++ HIH+ +L
Sbjct: 228 MDIDHFGNYFNCKGM-YLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPK-NHDVL 285
Query: 107 VFLPTYYALEQQWHLMKPLSSF-------FKVHILHSSVDTEQALMAMKICKSH-RKVIL 158
+FL +E ++ L+ +V L++ + + L ++ RKVIL
Sbjct: 286 IFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVIL 345
Query: 159 ATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDG 218
ATNIAE+S+TIP + VID + ++ +D + V +S++QA QR GR GR DG
Sbjct: 346 ATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADG 405
Query: 219 QVYRLVTKSFFGTLEDHECPAI 240
YR TK+ + D P I
Sbjct: 406 TCYRAYTKAEMDSFADATQPEI 427
Score = 45 (20.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 732 SENLES-QKTLMQNFFEHLAIRMLADALYDT 761
S+++E +K ++ FFE++A+ + D Y T
Sbjct: 604 SDDIEMLKKCILNGFFENIAV-LQRDGFYIT 633
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 171 (65.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 63/229 (27%), Positives = 103/229 (44%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 143
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 228 VFQIHQ-EAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQ 286
Query: 144 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
L + K RKVIL+TNIAE+S+TI + YV+D+ ++ ++ + VS+
Sbjct: 287 LRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSK 346
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA QR GR GR G YRL T+ F + P I + + A+
Sbjct: 347 AQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLL--QLLALRI 404
Query: 263 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK------ISPRGRYEPTF 305
P +L + P P+ + A++ LD A+++ ++P GR F
Sbjct: 405 PNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAF 453
Score = 41 (19.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 1 MSATADITKYRDYF 14
MSAT D+ ++ YF
Sbjct: 180 MSATMDVDQFSQYF 193
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 174 (66.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 51/164 (31%), Positives = 87/164 (53%)
Query: 134 LHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
+++++ +E QA + + RKV+LATNIAE+S+TI + YV+D S ++ +
Sbjct: 651 IYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGM 710
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXX 251
+S + +S++ A QR GR GRT G+ YRL T ++ LE++ P +
Sbjct: 711 ESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASV--- 767
Query: 252 ICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKI 295
+ +S I D ++ +DPP E + +L+LL AL K+
Sbjct: 768 VLALKSLGIHD--LINFDFMDPPPAEALVKSLELLFALGALNKL 809
Score = 42 (19.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 2 SATADITKYRDYF 14
SAT D K+ DYF
Sbjct: 556 SATMDAEKFSDYF 568
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 165 (63.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 51/176 (28%), Positives = 86/176 (48%)
Query: 125 LSSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQ 183
L++ + + +LHS++ E Q + + RK IL+TN+AE+SVTI + +VIDS +
Sbjct: 317 LTNGWIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNL 376
Query: 184 VFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXX 243
+ + WVS++ A QR+GR GRT G YRL ++ F ++D I
Sbjct: 377 IKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEKMDDFTVSEINRV 436
Query: 244 XXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRG 299
+ DP+ ++ P +V+ + L++L +R L+ S RG
Sbjct: 437 SLQEMALKMISLNLGL--DPRTF--PFIEKPSEDVLNEGLEVLKFQRVLR--SDRG 486
>UNIPROTKB|F5H625 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
IPI:IPI01010408 DNASU:79665 HGNC:HGNC:18018 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 EMBL:AC091271 EMBL:AC004167
Ensembl:ENST00000538926 UCSC:uc010woe.2 ArrayExpress:F5H625
Bgee:F5H625 Uniprot:F5H625
Length = 250
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK +++TNI+ +S+TI + YV+D Q+ + +D E+V +S+S+A QR GR G
Sbjct: 15 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 74
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICC 254
RT G+ +R+ +K F+ + DH P I + C
Sbjct: 75 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC 116
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 177 (67.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 68/219 (31%), Positives = 110/219 (50%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP----LSSFFKVHIL---HSSVDTE-Q 142
VL IH E ILVFL ++Q +++ L + K I+ +S++ T+ Q
Sbjct: 666 VLQIHITEP--LGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQ 723
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + + RKV+LATNIAE+S+TI + YVID Q ++ ++S + VS+
Sbjct: 724 AKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSR 783
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR+GR GR G+ +RL T +F LE++ P I + +S I+
Sbjct: 784 ASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNV---VLLLKSMGIN 840
Query: 262 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR 300
D ++ +DPP + + AL+ L AL ++ RG+
Sbjct: 841 D--LMNFDFMDPPPAQTLIAALEQL---YALGALNDRGQ 874
Score = 39 (18.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 2 SATADITKYRDYF 14
SAT D ++ DYF
Sbjct: 619 SATMDAERFSDYF 631
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 165 (63.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 66/217 (30%), Positives = 106/217 (48%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHL----MKPLS-SFFKVHIL--HSSVDTE-Q 142
V+ IH +E + IL+FL ++ + MK L S ++ IL +S++ E Q
Sbjct: 741 VMQIHIDEPPGD--ILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQ 798
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
+ + RKV++ATNIAE+S+TI + YV+D Q +D +DS + +SQ
Sbjct: 799 SRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQ 858
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA QR GR GRT G+ +RL T++ + T + +I I ++ I+D
Sbjct: 859 AQANQRAGRAGRTGPGKCFRLYTEAAYQT--EMLPTSIPEIQRQNLSNTILLLKAMGIND 916
Query: 263 PKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRG 299
+L +DPP P + L L+ AL + G
Sbjct: 917 --LLHFDFMDPP-P--INTMLTALEELYALSALDDEG 948
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 170 (64.9 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 60/160 (37%), Positives = 84/160 (52%)
Query: 89 DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMA-- 146
D V++IHK+E+ + ILVFL +E ++ L+ K V AL A
Sbjct: 285 DTVINIHKHENPGD--ILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPARE 342
Query: 147 -MKICKS--H--RKVILATNIAESSVTIPKVAYVIDSCR-SLQVFWDVNRKIDSAELVWV 200
MK S H RKV++ATNIAE+S+TIP + YVID+ L+ N +++ V V
Sbjct: 343 QMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANG-VETLMRVTV 401
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
S++ AEQR GR GR G+ YRL +S F + P I
Sbjct: 402 SKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEI 441
Score = 45 (20.9 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 428 EEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGL 469
++WCS H++ L + ++ + RF + + +S GL
Sbjct: 581 KKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKV-SSRGL 621
Score = 39 (18.8 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 2 SATADITKYRDYFR--DLGRGERVEVLAIPSTNQRT 35
SAT D ++D+F + G ++ + I S RT
Sbjct: 230 SATLDAELFKDFFEMNETGNSDK-DTAGIISVEGRT 264
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 165 (63.1 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 58/162 (35%), Positives = 86/162 (53%)
Query: 91 VLHIHKNESDIEKSILVFLPTY----YALEQQWHLMKPLSSFFKVHIL----HSSVDTE- 141
VL+IH NE + ILVFL A E MK L S ++ +SS+ +E
Sbjct: 830 VLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEM 887
Query: 142 QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKIDSAELVW 199
Q+++ RK ILATNIAE+S+TI + +VID C+ + +D R +DS +
Sbjct: 888 QSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKK--YDSKRDMDSLIVAP 945
Query: 200 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAI 240
+S++ A+QR GR GRT G+ YRL T+ + + + P I
Sbjct: 946 ISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEI 987
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 165 (63.1 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 58/162 (35%), Positives = 86/162 (53%)
Query: 91 VLHIHKNESDIEKSILVFLPTY----YALEQQWHLMKPLSSFFKVHIL----HSSVDTE- 141
VL+IH NE + ILVFL A E MK L S ++ +SS+ +E
Sbjct: 830 VLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEM 887
Query: 142 QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKIDSAELVW 199
Q+++ RK ILATNIAE+S+TI + +VID C+ + +D R +DS +
Sbjct: 888 QSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKK--YDSKRDMDSLIVAP 945
Query: 200 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAI 240
+S++ A+QR GR GRT G+ YRL T+ + + + P I
Sbjct: 946 ISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEI 987
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 172 (65.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 67/229 (29%), Positives = 103/229 (44%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 143
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 269 VFQIHQ-EAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQ 327
Query: 144 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
L + K +RKVI++TNIAE+S+TI + YV+D+ ++ + ++ + VS+
Sbjct: 328 LRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 387
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA QR GR GR G YRL T+ F E P I + A+
Sbjct: 388 TQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLL-----AMKV 442
Query: 263 PKVLLQKALDPPYPEVVGDA---LDLL---DHKRALQKISPRGRYEPTF 305
P VL + P P+ + A LDLL +HK ++P GR F
Sbjct: 443 PNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAF 491
Score = 38 (18.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1 MSATADITKYRDYF 14
MSAT D+ + YF
Sbjct: 221 MSATMDVDLFSQYF 234
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 170 (64.9 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 143
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 188 VFQIHQ-EAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQ 246
Query: 144 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
L + K +RKVI++TNIAE+S+TI + YV+D+ ++ + ++ + VS+
Sbjct: 247 LRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 306
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA QR GR GR G YRL T+ F + P I + A+
Sbjct: 307 TQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLL-----AMKV 361
Query: 263 PKVLLQKALDPPYPEVVGDA---LDLL---DHKRALQKISPRGRYEPTF 305
P VL + P P+ + A LDLL +HK ++P GR F
Sbjct: 362 PNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAF 410
Score = 38 (18.4 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1 MSATADITKYRDYF 14
MSAT D+ + YF
Sbjct: 140 MSATMDVDLFSQYF 153
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 167 (63.8 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 44/111 (39%), Positives = 69/111 (62%)
Query: 134 LHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNR 190
++S + ++ QA + K RK I+ATNIAE+S+T+ + YVID+ C+ L+V+ +
Sbjct: 906 IYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCK-LKVY-NPRV 963
Query: 191 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAI 240
+DS ++ +S++ A QR GR GRT G+ YRL T+S F L D+ P I
Sbjct: 964 GMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEI 1014
Score = 50 (22.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 405 DHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAV--HRFRPKF 462
DHL + + + K+ +WC+ HY+ ++ V E+ +L+ + H + +
Sbjct: 1135 DHLTLLHVYQQWKIN-----NYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVES 1189
Query: 463 LGTS 466
G++
Sbjct: 1190 CGSN 1193
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 162 (62.1 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 46/139 (33%), Positives = 75/139 (53%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVD--TEQALMAMK 148
+ H+ ++E+ S+L FLP ++ Q + L+S ++ L+ ++ +Q +A
Sbjct: 204 IRHLLQHETG---SLLAFLPGAASINQLTEQLSDLASEVEICPLYGQMEFAAQQRAIA-P 259
Query: 149 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 208
RKV+LATNIAE+S+TI + V+DS +D+ I E V ++QS AEQR
Sbjct: 260 TAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQR 319
Query: 209 RGRTGRTCDGQVYRLVTKS 227
GR GR G RL +++
Sbjct: 320 AGRAGRLEPGICVRLYSEA 338
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 162 (62.1 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 46/139 (33%), Positives = 75/139 (53%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVD--TEQALMAMK 148
+ H+ ++E+ S+L FLP ++ Q + L+S ++ L+ ++ +Q +A
Sbjct: 204 IRHLLQHETG---SLLAFLPGAASINQLTEQLSDLASEVEICPLYGQMEFAAQQRAIA-P 259
Query: 149 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 208
RKV+LATNIAE+S+TI + V+DS +D+ I E V ++QS AEQR
Sbjct: 260 TAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQR 319
Query: 209 RGRTGRTCDGQVYRLVTKS 227
GR GR G RL +++
Sbjct: 320 AGRAGRLEPGICVRLYSEA 338
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 157 (60.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 62/204 (30%), Positives = 101/204 (49%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP----LSSFFKVHIL--HSSVDTE-QA 143
VL+IH + + ILVF+ +E L++ L+ K+ IL +S + + QA
Sbjct: 502 VLNIHVSMGTGD--ILVFMTGQEDIEVTCELVRERLDALNDPPKLSILPIYSQMPADLQA 559
Query: 144 LMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQS 203
+ + RK I+ATNIAE+S+T+ + YV+D+ S ++ +D+ ++ +SQ+
Sbjct: 560 KIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQA 619
Query: 204 QAEQRRGRTGRTCDGQVYRLVT-KSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
A QR GR GRT G+ +RL T K+F L P I I +S + D
Sbjct: 620 NASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLI---KSLGVKD 676
Query: 263 PKVLLQKALDPPYPEVVGDAL-DL 285
+L +DPP + + +L DL
Sbjct: 677 --MLDFDFMDPPPQDTMTTSLFDL 698
Score = 56 (24.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 428 EEWCSLHYLVQSSLHHVSELYEDILN 453
+ WCS H+L SL E+ + +L+
Sbjct: 796 DAWCSRHFLHSKSLRRAKEVRDQLLD 821
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 160 (61.4 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 51/172 (29%), Positives = 83/172 (48%)
Query: 131 VHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
++ LH S+ E + + R+ I++TNIAE+S+T+ V YVIDS Q ++ +
Sbjct: 250 IYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPS 309
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXX 249
+ S +++ +S+ QA QR GR GRT G+ YRL + + +D I
Sbjct: 310 SGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYR--DDFLDATIPEIQRTSLA 367
Query: 250 XXICCAESKAISDPKVLLQKALDPPYPEVVGDAL------DLLDHKRALQKI 295
+ +S + D +L LD P E + DAL D +D A+ +I
Sbjct: 368 GSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRI 419
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 170 (64.9 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 143
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 278 VFQIHQ-EAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQ 336
Query: 144 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
L + K +RKVI++TNIAE+S+TI + YV+D+ ++ + ++ + VS+
Sbjct: 337 LRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 396
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA QR GR GR G YRL T+ F + P I + A+
Sbjct: 397 TQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLL-----AMKV 451
Query: 263 PKVLLQKALDPPYPEVVGDA---LDLL---DHKRALQKISPRGRYEPTF 305
P VL + P P+ + A LDLL +HK ++P GR F
Sbjct: 452 PNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAF 500
Score = 38 (18.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1 MSATADITKYRDYF 14
MSAT D+ + YF
Sbjct: 230 MSATMDVDLFSQYF 243
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 159 (61.0 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 56/187 (29%), Positives = 95/187 (50%)
Query: 41 VSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH------KLIHDLVLHI 94
V LE + L + G E SSL +G S + E+ H K+ DL++H+
Sbjct: 556 VDLLESYSATL--EFGNLDE-SSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 612
Query: 95 HKN--ESDIEKSILVFLPTYYALEQ-QWHLMKPLSSF------FKVHILHSSVDTEQALM 145
N S ++L+FLP Y + + ++ F ++V +LHS++ T
Sbjct: 613 LYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKK 672
Query: 146 AMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQ 204
+K + RK+IL+TNIAE+S+T+ V +VIDS + + +D + ++VW+S++
Sbjct: 673 VLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKAS 732
Query: 205 AEQRRGR 211
A QR+GR
Sbjct: 733 AIQRKGR 739
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 169 (64.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 81 PEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYYALEQQWHL----MKPLSSFFKVHIL 134
PE L L V+ IH +E + IL+FL ++ + MK L S I+
Sbjct: 695 PEADYLDASLITVMQIHLSEPPGD--ILLFLTGQEEIDAACQILYERMKSLGSNVPDLII 752
Query: 135 ---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 190
+S++ +E Q + RKV++ATNIAE+S+TI + YVID S Q ++
Sbjct: 753 LPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKN 812
Query: 191 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXX 250
+DS + +SQ+ A QR GR GRT G+ YRL T+S F + +I
Sbjct: 813 GMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKN--EMLASSIPEIQRTNLGN 870
Query: 251 XICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK 294
+ ++ I+D +L +DPP + + A++ L AL +
Sbjct: 871 TVLTMKAMGIND--LLNFDFMDPPPVQTLVSAMEQLYSLGALDE 912
Score = 43 (20.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/35 (17%), Positives = 17/35 (48%)
Query: 425 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFR 459
K WC +++ SL ++ + ++ + R++
Sbjct: 999 KFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYK 1033
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 467
+W H LV ++ ++ E+ + PKF TS+
Sbjct: 1090 DWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSD 1128
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 168 (64.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 68/243 (27%), Positives = 108/243 (44%)
Query: 80 KPEVHKLIHDL---VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK------ 130
+P+ H +H V IH+ E+ ILVFL +E + ++
Sbjct: 272 QPQ-HDYLHAALVSVFQIHQ-EAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSM 329
Query: 131 -VHILHSSVDTEQALMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
V L++S+ Q L + K +RKVI++TNIAE+S+TI + YV+D+ ++
Sbjct: 330 LVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNP 389
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXX 248
+ ++ + VS++QA QR GR GR G YRL T+ F E P I
Sbjct: 390 DSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASV 449
Query: 249 XXXICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLL---DHKRALQKISPRGRYE 302
+ A+ P VL + P P+ + A L+LL +H+ ++P GR
Sbjct: 450 MLQLL-----AMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKM 504
Query: 303 PTF 305
F
Sbjct: 505 AAF 507
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1 MSATADITKYRDYF 14
MSAT D+ + YF
Sbjct: 237 MSATMDVDLFSQYF 250
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 167 (63.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 52/161 (32%), Positives = 84/161 (52%)
Query: 89 DLVLHIHKNESDIEKSILVFLPTYYALEQ--QWHLMKPLSSFFKVHIL--HSSVDTEQAL 144
D+++ + E +IEK I + L Q Q H + F K +L +S + + +
Sbjct: 288 DILVFLTGQE-EIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQI 346
Query: 145 MAMKIC---KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV-FWDVNRKIDSAELVWV 200
+ K RK+I++TNIAE+S+TI V YV+D C +++ +D ++S +V
Sbjct: 347 KVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVD-CGFVKIKSYDSESGLESLVIVPT 405
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAI 240
S+S A QR GR GR+ G+ YRL T+ ++ L D P I
Sbjct: 406 SKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEI 446
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDIL 452
+WC+ H + ++ V ++ + +L
Sbjct: 583 QWCNQHQINYKAMQRVLQVRKQLL 606
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 166 (63.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 56/191 (29%), Positives = 88/191 (46%)
Query: 113 YALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKV 172
YA EQ L+ PL S +Q+ + + RK I++TNIAE+S+T+ V
Sbjct: 395 YATEQTHWLVLPLHS--------GQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGV 446
Query: 173 AYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTL 232
+V+DS + ++ +D K + WVS+S A+QR+GR GRT G +RL T +
Sbjct: 447 RFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAF 506
Query: 233 EDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL 292
E + P I + S + D + ++ P E + + L AL
Sbjct: 507 EAYPTPEIYRVPLDTMLLQMV---SMGLPDVRAF--PFIEAPETERIEQTILALKQHCAL 561
Query: 293 ---QKISPRGR 300
+KI+P GR
Sbjct: 562 SVEEKITPLGR 572
Score = 44 (20.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/129 (22%), Positives = 54/129 (41%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSE 60
MSAT ++ + YF + G ++ +P +F ++ YL L + G +
Sbjct: 294 MSATINVELFHGYFGEEG----ARLVQVPGR----LFPIKLRYLPPPA--LELKAGQATS 343
Query: 61 LSSLRYCSGPSPSMANAEIKPEVHKLIH--DLVLHIHKNESDIEKSILVFLPTYYALEQQ 118
S R P+P + + + + D+++ + ++IE +V YA EQ
Sbjct: 344 KRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFV-SGVNEIES--VVEAVHEYATEQT 400
Query: 119 WHLMKPLSS 127
L+ PL S
Sbjct: 401 HWLVLPLHS 409
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 170 (64.9 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 62/208 (29%), Positives = 98/208 (47%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQ-----QWHLMKPLSSFFKVHILHSSVDTEQALM 145
V+ IH NE + ILVFL +E Q + K L+SS+ Q
Sbjct: 277 VIDIHTNEGTGD--ILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSK 334
Query: 146 AMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 205
CK RK I++TNIAE+S+TI + +V+D S Q ++ +++S + +S++ A
Sbjct: 335 IFDTCKE-RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASA 393
Query: 206 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHEC-PAIXXXXXXXXXXXICCAESKAISDPK 264
QR GR GRT G+ +RL T+ F L + P I + + D
Sbjct: 394 NQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLL---KLGVVD-- 448
Query: 265 VLLQKALDPPYPEVVGDALDLLDHKRAL 292
++ +DPP P+ + AL++L + AL
Sbjct: 449 LVHFDFMDPPVPDTLIRALEVLHYLGAL 476
Score = 40 (19.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 730 SYSENLESQKTLMQNFFEHLAIRMLADAL 758
S+ +N E NF H AI+ AD++
Sbjct: 560 SFKKNGEDPTWCYDNFLNHRAIKQ-ADSV 587
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 1 MSATADITKYRDYFRD 16
MSAT + K++ YF +
Sbjct: 229 MSATLEAGKFQKYFEN 244
Score = 37 (18.1 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 430 WCSLHYLVQSSLHHVSELYEDILNAVHRFR-PKFLGTSNGLPTYYD 474
WC ++L ++ + + + RF+ P G N YY+
Sbjct: 570 WCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNS-KFYYE 614
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 167 (63.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 57/172 (33%), Positives = 83/172 (48%)
Query: 81 PE-VHKLIH---DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLS-----SFFKV 131
PE VH + ++ IH E I ILVFL +E +L+ + S K+
Sbjct: 378 PEPVHDFVDAALKVIFQIHYKEP-IPGDILVFLTGQETVEALENLVNEYATGMDPSLPKI 436
Query: 132 HILHSSVDTEQALMAMKICKSH---RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 188
+L QA + RK+ILATNIAE+SVT+ V YV+D ++ +
Sbjct: 437 QVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRT 496
Query: 189 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
+DS + +S+S A QR+GR GR GQ YRL T+ + L++ P I
Sbjct: 497 RLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLALDEVNTPEI 548
Score = 39 (18.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 1 MSATADITKYRDYF 14
MSATAD+ +++F
Sbjct: 327 MSATADMESLQEFF 340
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 161 (61.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 57/159 (35%), Positives = 81/159 (50%)
Query: 81 PEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYYALE---QQWH-LMKPLSSFFKVHIL 134
PE+ L L V+ IH +E ILVFL +E + H MK L I+
Sbjct: 527 PEMDYLAAALESVIQIHVSEP--AGDILVFLTGQEEIETSCEALHERMKLLGENIPELII 584
Query: 135 ---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 190
+S++ +E Q + RKVILATNIAE+S+TI + YV+D +D
Sbjct: 585 LPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKL 644
Query: 191 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 229
+DS + +S++QA QR GR GRT G+ YRL T+ +
Sbjct: 645 GMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAY 683
Score = 47 (21.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 430 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 467
WC +++ + S+ E+ + + + + RF K + N
Sbjct: 836 WCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTMSCGN 873
>POMBASE|SPCC1739.01 [details] [associations]
symbol:SPCC1739.01 "zf-CCCH type zinc finger protein"
species:4896 "Schizosaccharomyces pombe" [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 PomBase:SPCC1739.01
GO:GO:0005829 EMBL:CU329672 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5084 InterPro:IPR026290 PANTHER:PTHR11224
OrthoDB:EOG49S9H4 PIR:T41213 RefSeq:NP_588409.2
ProteinModelPortal:O74463 EnsemblFungi:SPCC1739.01.1 GeneID:2539315
KEGG:spo:SPCC1739.01 NextBio:20800480 Uniprot:O74463
Length = 547
Score = 154 (59.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 32/74 (43%), Positives = 42/74 (56%)
Query: 566 CVYFINGSCNRGTGCPFSHSLQAKRPACKFFYSLQG-CRNGDSCIFSHDL-GQPVLPSSS 623
C +F NG+C G CPFSHSL+ +RP CK+F L+G C+ G C SH L G LP+ +
Sbjct: 47 CKFFRNGTCTAGENCPFSHSLETERPICKYF--LKGNCKFGPKCALSHALPGNTNLPNGT 104
Query: 624 FTCLPEDGVANAAS 637
T AN +
Sbjct: 105 STNTMASMAANGGA 118
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 158 (60.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 134 LHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKI 192
LH+ + ++ + I RKVI +TNIAE+S+TI + YV+DS + Q ++ +
Sbjct: 275 LHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRT 334
Query: 193 DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLED 234
V +S+S A QR GR GRT G+V+RL T+ + +++
Sbjct: 335 SKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKE 376
Score = 45 (20.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 425 KIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKF-LGTSNGLPT 471
K + +WC +YL +L DI + RF KF + T+ LP+
Sbjct: 520 KKDLQWCRKNYLNYQTLRQAL----DIRTHLVRFLNKFSIPTAQRLPS 563
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 415 ETKVTASLLPKIEEEWCSLHY 435
ET++ + KIE W +Y
Sbjct: 623 ETQIFVKNISKIESFWLDKYY 643
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 152 (58.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 148 KICKSH--RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 205
K+ SH R+++LATN+AE+S+T+P + YVID + + K+ + +SQ+ A
Sbjct: 332 KVFSSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASA 391
Query: 206 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKV 265
QR+GR GR G RL ++ F PA + AI +
Sbjct: 392 NQRQGRCGRVGPGICIRLYDEADFNNR-----PAFTDPEILRTNLASVILQMLAIGLGDI 446
Query: 266 LLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRXXXXXXXXXXXXXXXXK 325
++PP P + D LL+ +A+++ +G T GR +
Sbjct: 447 AAFPFIEPPDPRHIRDGFLLLEELQAVKQ--QKGNIVLTPLGRQLSQIPVDPRLARMVIE 504
Query: 326 FGEIGMLREGILL--GI-LMDTQPLPI 349
++G L E +++ G+ + D + P+
Sbjct: 505 SHQLGCLNEVLVIASGLSIQDPRERPM 531
Score = 55 (24.4 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 489 PRDMDPLAAD---NEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRVQY 542
P ++PLAA HL P FEAK+ + F N V L +++ RVQY
Sbjct: 684 PEWLEPLAAHLIKKNHLEPHFEAKQGSVIAF-------ENQVLYGL-TVVHRRRVQY 732
Score = 49 (22.3 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 406 HLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGT 465
+L Q LK + +++AS K C YL + +LY + AVH + +
Sbjct: 556 NLWQHLKEQQKELSASQFRKK----CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRL--- 608
Query: 466 SNGLPTYYDPYEFEHTCLLN 485
N P YD H LL+
Sbjct: 609 -NDTPANYDAL---HRALLS 624
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 152 (58.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 148 KICKSH--RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQA 205
K+ SH R+++LATN+AE+S+T+P + YVID + + K+ + +SQ+ A
Sbjct: 332 KVFSSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASA 391
Query: 206 EQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKV 265
QR+GR GR G RL ++ F PA + AI +
Sbjct: 392 NQRQGRCGRVGPGICIRLYDEADFNNR-----PAFTDPEILRTNLASVILQMLAIGLGDI 446
Query: 266 LLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRXXXXXXXXXXXXXXXXK 325
++PP P + D LL+ +A+++ +G T GR +
Sbjct: 447 AAFPFIEPPDPRHIRDGFLLLEELQAVKQ--QKGNIVLTPLGRQLSQIPVDPRLARMVIE 504
Query: 326 FGEIGMLREGILL--GI-LMDTQPLPI 349
++G L E +++ G+ + D + P+
Sbjct: 505 SHQLGCLNEVLVIASGLSIQDPRERPM 531
Score = 55 (24.4 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 489 PRDMDPLAAD---NEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRVQY 542
P ++PLAA HL P FEAK+ + F N V L +++ RVQY
Sbjct: 684 PEWLEPLAAHLIKKNHLEPHFEAKQGSVIAF-------ENQVLYGL-TVVHRRRVQY 732
Score = 49 (22.3 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 406 HLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGT 465
+L Q LK + +++AS K C YL + +LY + AVH + +
Sbjct: 556 NLWQHLKEQQKELSASQFRKK----CRDEYLAYLRVREWQDLYTQLKQAVHDLKWRL--- 608
Query: 466 SNGLPTYYDPYEFEHTCLLN 485
N P YD H LL+
Sbjct: 609 -NDTPANYDAL---HRALLS 624
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 156 (60.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 65/227 (28%), Positives = 111/227 (48%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL---HSSVDTE-Q 142
V IH + + IL+FL +E Q + L S K ++ ++++ +E Q
Sbjct: 573 VFQIHTTQP--KGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQ 630
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
+ + ++ RKV+LATNIAE+S+TI + YVID + ++ + + +V S+
Sbjct: 631 SKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSR 690
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR GR GR G+ +RL TK ++ +E+ P I + K++
Sbjct: 691 ASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQL-----KSLG 745
Query: 262 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 308
++L + +DPP E + AL+ L ALQ ++ +G E T GR
Sbjct: 746 INELLDFEFMDPPPTEALIGALNQLF---ALQGLNHKG--ELTKLGR 787
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 171 (65.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 64/197 (32%), Positives = 100/197 (50%)
Query: 92 LHIHKNESDIEKSILVFLPTYYALE-QQWHLMKPLSSF-----FKVHILHSSVDTE-QAL 144
L IH S + IL+F+P +E +++ L+ V ++S + ++ QA
Sbjct: 763 LQIHL--SGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAK 820
Query: 145 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 200
+ K RK I+ATNIAE+S+T+ + +V+DS C+ L+VF N +I D+ ++ +
Sbjct: 821 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCK-LKVF---NPRIGMDALQVYPI 876
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAI 260
SQ+ A QR GR GRT GQ YRL T+S F + I + +S +
Sbjct: 877 SQANANQRAGRAGRTGPGQCYRLYTQSAFKN--EMLTTTIPEIQRTNLANVVLLLKSLGV 934
Query: 261 SDPKVLLQKALDPPYPE 277
D +LL +DPP PE
Sbjct: 935 QD--LLLFHFMDPP-PE 948
Score = 37 (18.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 430 WCSLHYLVQSSLHHVSEL 447
WC+ H++ ++ V E+
Sbjct: 1058 WCNDHFIHTKAMRKVREV 1075
>TIGR_CMR|SPO_0972 [details] [associations]
symbol:SPO_0972 "ATP-dependent helicase HrpB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
RefSeq:YP_166224.1 ProteinModelPortal:Q5LUT1 GeneID:3192888
KEGG:sil:SPO0972 PATRIC:23375231 HOGENOM:HOG000244610
ProtClustDB:CLSK933398 Uniprot:Q5LUT1
Length = 816
Score = 154 (59.3 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 89 DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP-LSSFFKVHILHSSVDTEQALMAM 147
DLV D+ S+LVFLP + + L+ L + L ++ A+
Sbjct: 203 DLVAKAEAETRDLGGSLLVFLPGEGEIRRAQTLLSARLPDSCTLRPLFGAMPFAAQRAAI 262
Query: 148 KICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQ 207
+ R V+LAT+IAE+S+TIP V V+D ++ + +D + V++++A Q
Sbjct: 263 RPATEGRNVVLATSIAETSLTIPDVRVVVDMGQARRARFDPGSGMTRLVTERVTRAEATQ 322
Query: 208 RRGRTGRTCDGQVYRLVTKSFFGTL 232
R GR GR +G YRL T+ G L
Sbjct: 323 RAGRAGRVAEGICYRLWTRGEEGAL 347
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 157 (60.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 48/128 (37%), Positives = 75/128 (58%)
Query: 120 HLMKPLSSFFKVHILHSSVDTEQALMAMKICKSH--RKVILATNIAESSVTIPKVAYVID 177
H++ P F + ++S + +EQ KI K + RK+I++TNIAE+S+T+ + YVID
Sbjct: 767 HMIYP----FYIFPIYSQLSSEQQ---SKIFKKYDLRKIIVSTNIAETSLTLDGIKYVID 819
Query: 178 S--CRSLQVFWDVNRKI--DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS-FFGTL 232
+ C+ L+V+ N+ I D ++ +SQ+ A QR GR GRT G YRL T++ F L
Sbjct: 820 TGYCK-LKVY---NQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDL 875
Query: 233 EDHECPAI 240
+ P I
Sbjct: 876 YQNNIPEI 883
Score = 50 (22.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 7/38 (18%), Positives = 19/38 (50%)
Query: 430 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 467
WC+ +++ +L+ E+Y +++ + K + N
Sbjct: 1024 WCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDN 1061
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 157 (60.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 48/128 (37%), Positives = 75/128 (58%)
Query: 120 HLMKPLSSFFKVHILHSSVDTEQALMAMKICKSH--RKVILATNIAESSVTIPKVAYVID 177
H++ P F + ++S + +EQ KI K + RK+I++TNIAE+S+T+ + YVID
Sbjct: 767 HMIYP----FYIFPIYSQLSSEQQ---SKIFKKYDLRKIIVSTNIAETSLTLDGIKYVID 819
Query: 178 S--CRSLQVFWDVNRKI--DSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS-FFGTL 232
+ C+ L+V+ N+ I D ++ +SQ+ A QR GR GRT G YRL T++ F L
Sbjct: 820 TGYCK-LKVY---NQTIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDL 875
Query: 233 EDHECPAI 240
+ P I
Sbjct: 876 YQNNIPEI 883
Score = 50 (22.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 7/38 (18%), Positives = 19/38 (50%)
Query: 430 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSN 467
WC+ +++ +L+ E+Y +++ + K + N
Sbjct: 1024 WCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDN 1061
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 161 (61.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 54/143 (37%), Positives = 77/143 (53%)
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAE 196
+QA + K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ +
Sbjct: 98 DQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQ 153
Query: 197 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCA 255
+ +SQ+ A QR GR GRT GQ +RL T+S + L P I +
Sbjct: 154 IYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLL 210
Query: 256 ESKAISDPKVLLQ-KALDPPYPE 277
+S + D LLQ +DPP PE
Sbjct: 211 KSLGVQD---LLQFHFMDPP-PE 229
Score = 37 (18.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 430 WCSLHYLVQSSLHHVSEL 447
WC+ H++ ++ V E+
Sbjct: 339 WCNDHFIHAKAMRKVREV 356
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 169 (64.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 51/148 (34%), Positives = 84/148 (56%)
Query: 90 LVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP-LSSF-----FKVHILHSSVDTE-Q 142
L +H+ NE D+ L+F+P +E +++ L+ + ++S + ++ Q
Sbjct: 734 LQVHLTPNEGDM----LIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQ 789
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELV 198
A + K RK ++ATNIAE+S+T+ + YVIDS C+ L+V+ N +I D+ ++
Sbjct: 790 AKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCK-LKVY---NPRIGMDALQIY 845
Query: 199 WVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
+SQ+ A QR GR GRT GQ YRL T+
Sbjct: 846 PISQANANQRSGRAGRTGPGQAYRLYTQ 873
Score = 38 (18.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 430 WCSLHYLVQSSLHHVSELYEDI 451
WC+ H++ ++ V E+ + +
Sbjct: 1029 WCNEHFIHIKAMRKVREVRQQL 1050
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 161 (61.7 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 62/212 (29%), Positives = 97/212 (45%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTEQA 143
V IH+ E+ + ILVFL +E + ++ V L++S+ Q
Sbjct: 187 VFQIHQ-EAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQ 245
Query: 144 LMAMKIC-KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
L + K RKVI+ATNIAE+S+TI + YV+D+ ++ + ++ + VS+
Sbjct: 246 LRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 305
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISD 262
+QA QR GR GR G YRL T++ F E P I + A+
Sbjct: 306 TQAWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLL-----AMKV 360
Query: 263 PKVLLQKALDPPYPEVVGDALDLLDHKRALQK 294
P VL + P P+ + A+ LD AL++
Sbjct: 361 PNVLTFDFMSKPSPDHMQAAVAQLDLLGALER 392
Score = 38 (18.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1 MSATADITKYRDYF 14
MSAT D+ + YF
Sbjct: 139 MSATMDVDLFSQYF 152
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 154 (59.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 68/227 (29%), Positives = 105/227 (46%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDTE-Q 142
+L IH + ILVFL +E M+ L I +++++ +E Q
Sbjct: 618 ILQIHTTQP--AGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQ 675
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + RKV+LATNIAE+S+TI V +VIDS Q ++ ++S V S+
Sbjct: 676 AKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSR 735
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A+QR GR GR G+ +RL T+ + L+ P I + K++
Sbjct: 736 ASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLL-----KSLG 790
Query: 262 DPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 308
+L +D P PE + +L+LL AL ++ RG E T GR
Sbjct: 791 INNLLDFDFMDAPPPETLMRSLELL---YALGALNNRG--ELTKLGR 832
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 158 (60.7 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 699 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 756
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 757 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 816
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 817 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 853
Score = 49 (22.3 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 963 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1021
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1022 RAQDIRKQMLGIMDRHK 1038
Score = 43 (20.2 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 17 LGRGERVEVLAIPSTNQRTIFQRRVSYLEQVT-ELLGVDH-----GMTSELSSLRYCSGP 70
+ +G+RV+V + T +T + ++Q T E L + G T+E +S+R P
Sbjct: 293 VSKGQRVKVKVLSFTGSKTSLSMKD--VDQDTGEDLNPNRRRNLVGETNEETSMRNPDRP 350
Query: 71 SP-SMANAEIKPEV 83
S S+ NA PEV
Sbjct: 351 SHLSLVNA---PEV 361
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 665 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 695
Score = 38 (18.4 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1086 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1135
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 157 (60.3 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRS-LQVFWDVNRKI--DSAELVWVSQSQAEQRRG 210
RK+I+ATNIAE+S+TI + YVID S L+V+ N KI DS + +S++ A+QR G
Sbjct: 632 RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVY---NPKIGLDSLVITPISKANADQRSG 688
Query: 211 RTGRTCDGQVYRLVTKSFF 229
R GRT G YRL T+ F
Sbjct: 689 RAGRTAPGTAYRLYTEDTF 707
Score = 46 (21.3 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 405 DHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDIL 452
DHL + F++ + WC+ H++ SL ++ + +L
Sbjct: 841 DHLTLLNVFEQWRAN-----NFSSHWCNKHFVQYKSLVRARDIRDQLL 883
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 162 (62.1 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 92 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 144
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 271 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 328
Query: 145 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 200
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 329 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 384
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 259
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 385 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 441
Query: 260 ISDPKVLLQ-KALDPPYPE 277
+ D LLQ +DPP PE
Sbjct: 442 VQD---LLQFHFMDPP-PE 456
Score = 37 (18.1 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 430 WCSLHYLVQSSLHHVSEL 447
WC+ H++ ++ V E+
Sbjct: 566 WCNDHFIHAKAMRKVREV 583
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 166 (63.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 49/134 (36%), Positives = 72/134 (53%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKVILATNIAE+S+TI + YVID + Q ++ ++S +V +S++ A QR GR G
Sbjct: 521 RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAG 580
Query: 214 RTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T ++ LED+ P I + KA+ ++ LD
Sbjct: 581 RTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML-----KALGINDLIHFDFLD 635
Query: 273 PPYPEVVGDALDLL 286
PP E + AL+ L
Sbjct: 636 PPPHETLVLALEQL 649
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 801 ELSDTVNTKRPMLVSRA 817
EL D+ N K P + RA
Sbjct: 874 ELEDSTNKKMPKVAGRA 890
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 5/29 (17%), Positives = 15/29 (51%)
Query: 429 EWCSLHYLVQSSLHHVSELYEDILNAVHR 457
+WC +++ S+ ++ E ++ + R
Sbjct: 749 QWCYENFIQYRSMKRARDVREQLVGLMQR 777
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/167 (31%), Positives = 87/167 (52%)
Query: 87 IHDLVLH--IHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK----VHI-----LH 135
I D V+ I N+ + IL FLP +++ +M+ ++ + V + L+
Sbjct: 275 IVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLY 334
Query: 136 SSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS-CRSLQVFWDVNRKID 193
+++ +Q+L+ I RKV+ +TNIAE+SVTI V +V+DS R ++V W +
Sbjct: 335 AALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKV-WRHQLGLA 393
Query: 194 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
+ V +SQ+ A QR GR GR +G+ +RL +S + L P I
Sbjct: 394 TLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEI 440
>TIGR_CMR|CPS_4302 [details] [associations]
symbol:CPS_4302 "ATP-dependent helicase HrpB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 RefSeq:YP_270952.1
ProteinModelPortal:Q47W70 STRING:Q47W70 DNASU:3518946
GeneID:3518946 KEGG:cps:CPS_4302 PATRIC:21471457
BioCyc:CPSY167879:GI48-4312-MONOMER Uniprot:Q47W70
Length = 845
Score = 147 (56.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 81 PEVHKLIHDLVLHIHKNES-DIEKSILVFLPTYYALEQQWH-LMKPLSSFFKVHILHSSV 138
P H+ + L + K++ + SILVFLP + LM K+ L +
Sbjct: 196 PRAHQRWREHALAVIKDKMYNHIGSILVFLPGVADIRFLLDSLMAQKVEGVKICPLFGEL 255
Query: 139 DTEQALMAMKICKS-HRKVILATNIAESSVTIPKVAYVID-SCRSLQVFWDVNRKIDSAE 196
++ A+ C S HRK++LATNIAE+S+TI + VID + VF D ++
Sbjct: 256 SLKEQQQAIAPCLSGHRKIVLATNIAETSLTIDGIDLVIDCGLEKVAVF-DSASLMNKLM 314
Query: 197 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF 229
+S++ A QR GR GR GQ RL K F
Sbjct: 315 QKQISKASAVQRAGRAGRLMHGQCIRLYGKDDF 347
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 158 (60.7 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 751 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 808
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 809 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 868
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 869 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905
Score = 49 (22.3 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1015 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1073
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1074 RAQDIRKQMLGIMDRHK 1090
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 50 LLGVDHGMTSELSSLRYCS 68
L+G + G EL+ L Y S
Sbjct: 11 LIGSEPGPAEELAKLEYLS 29
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 717 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 747
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 158 (60.7 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 720 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 777
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 778 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 837
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 838 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 874
Score = 49 (22.3 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 984 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1042
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1043 RAQDIRKQMLGIMDRHK 1059
Score = 38 (18.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 50 LLGVDHGMTSELSSLRYCS 68
L+G + G EL+ L Y S
Sbjct: 11 LMGSEPGPAEELAKLEYLS 29
Score = 38 (18.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 686 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 716
Score = 38 (18.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1107 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1156
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 158 (60.7 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 743 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 800
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 801 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 860
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 861 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 897
Score = 49 (22.3 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1007 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1065
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1066 RAQDIRKQMLGIMDRHK 1082
Score = 38 (18.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 709 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 739
Score = 38 (18.4 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1130 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1179
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 158 (60.7 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 747 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 804
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 805 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 864
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 865 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 901
Score = 49 (22.3 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1011 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1069
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1070 RAQDIRKQMLGIMDRHK 1086
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 713 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 743
Score = 38 (18.4 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1134 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1183
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 158 (60.7 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 751 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 808
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 809 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 868
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 869 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905
Score = 49 (22.3 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1015 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1073
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1074 RAQDIRKQMLGIMDRHK 1090
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 50 LLGVDHGMTSELSSLRYCS 68
L+G + G EL+ L Y S
Sbjct: 11 LIGSEPGPAEELAKLEYLS 29
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 717 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 747
Score = 38 (18.4 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1138 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1187
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 158 (60.7 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 761 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 818
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 819 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 878
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 879 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 915
Score = 49 (22.3 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1025 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1083
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1084 RAQDIRKQMLGIMDRHK 1100
Score = 38 (18.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 727 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 757
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1148 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1197
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 162 (62.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 92 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 144
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 731 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 788
Query: 145 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 200
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 789 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 844
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 259
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 845 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 901
Query: 260 ISDPKVLLQ-KALDPPYPE 277
+ D LLQ +DPP PE
Sbjct: 902 VQD---LLQFHFMDPP-PE 916
Score = 37 (18.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 430 WCSLHYLVQSSLHHVSEL 447
WC+ H++ ++ V E+
Sbjct: 1026 WCNDHFIHAKAMRKVREV 1043
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 162 (62.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 92 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 144
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 732 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 789
Query: 145 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 200
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 790 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 845
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 259
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 846 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 902
Query: 260 ISDPKVLLQ-KALDPPYPE 277
+ D LLQ +DPP PE
Sbjct: 903 VQD---LLQFHFMDPP-PE 917
Score = 37 (18.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 430 WCSLHYLVQSSLHHVSEL 447
WC+ H++ ++ V E+
Sbjct: 1027 WCNDHFIHAKAMRKVREV 1044
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 162 (62.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 92 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 144
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 732 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 789
Query: 145 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 200
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 790 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 845
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 259
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 846 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 902
Query: 260 ISDPKVLLQ-KALDPPYPE 277
+ D LLQ +DPP PE
Sbjct: 903 VQD---LLQFHFMDPP-PE 917
Score = 37 (18.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 430 WCSLHYLVQSSLHHVSEL 447
WC+ H++ ++ V E+
Sbjct: 1027 WCNDHFIHAKAMRKVREV 1044
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 162 (62.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 92 LHIHKNESDIEKSILVFLPTYYALE----QQWHLMKPLSSFFKVHIL--HSSVDTE-QAL 144
L +H S IL+F+P +E Q ++ L + + +L +S + ++ QA
Sbjct: 733 LQVHL--SGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAK 790
Query: 145 MAMKICKSHRKVILATNIAESSVTIPKVAYVIDS--CRSLQVFWDVNRKI--DSAELVWV 200
+ K RK I+ATNIAE+S+T+ + +VIDS C+ L+VF N +I D+ ++ +
Sbjct: 791 IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK-LKVF---NPRIGMDALQIYPI 846
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIXXXXXXXXXXXICCAESKA 259
SQ+ A QR GR GRT GQ +RL T+S + L P I + +S
Sbjct: 847 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANV---VLLLKSLG 903
Query: 260 ISDPKVLLQ-KALDPPYPE 277
+ D LLQ +DPP PE
Sbjct: 904 VQD---LLQFHFMDPP-PE 918
Score = 37 (18.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 430 WCSLHYLVQSSLHHVSEL 447
WC+ H++ ++ V E+
Sbjct: 1028 WCNDHFIHAKAMRKVREV 1045
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 158 (60.7 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 773 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 830
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 831 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 890
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 891 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 927
Score = 49 (22.3 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1037 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1095
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1096 RAQDIRKQMLGIMDRHK 1112
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 50 LLGVDHGMTSELSSLRYCS 68
L+G + G EL+ L Y S
Sbjct: 11 LMGSEPGPAEELAKLEYLS 29
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 739 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 769
Score = 38 (18.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1160 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1209
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 158 (60.7 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 80 KPEVHKLIHDL--VLHIHKNESDIEKSILVFLPTYY----ALEQQWHLMKPLSSFFKVHI 133
+PE L L V+ IH E + ILVFL A E + MK L I
Sbjct: 775 EPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELI 832
Query: 134 L---HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 189
+ +S++ +E Q + RKV++ATNIAE+S+TI + YV+D Q ++
Sbjct: 833 ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK 892
Query: 190 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK 226
ID + +SQ+QA+QR GR GRT G+ YRL T+
Sbjct: 893 TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 929
Score = 49 (22.3 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 395 QHVF---KDKQRLDHLQQVLKFDETKVT-ASLLP--------KIEEEWCSLHYLVQSSLH 442
Q+VF KDKQ L Q+ KF +T+ +LL K WC +++ SL
Sbjct: 1039 QNVFYRPKDKQALAD-QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1097
Query: 443 HVSELYEDILNAVHRFR 459
++ + +L + R +
Sbjct: 1098 RAQDIRKQMLGIMDRHK 1114
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 50 LLGVDHGMTSELSSLRYCS 68
L+G + G EL+ L Y S
Sbjct: 11 LMGSEPGPAEELAKLEYLS 29
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 SATADITKYRDYFRDL------GRGERVEVL 26
SAT D K+ YF + GR VE+L
Sbjct: 741 SATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 771
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPT 471
+S L + EW H LV ++ ++ E+ + F P F S+ PT
Sbjct: 1162 SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD--PT 1211
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 146 (56.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 53/167 (31%), Positives = 84/167 (50%)
Query: 79 IKPE---VHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQW----HLMKPLSSFFKV 131
++PE +H I + IH +S + ILVFL +E+ +M L S K
Sbjct: 411 LQPEANYIHAAI-TTIFQIHTTQS-LPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQ 468
Query: 132 HIL---HSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
I+ ++++ EQ L + + RKV+LATNIAE+S+TI + YVID + +
Sbjct: 469 MIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYV 528
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLE 233
+ + V S++ +QR GR GR G+ +R+ TK S+ LE
Sbjct: 529 PSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELE 575
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 164 (62.8 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 52/156 (33%), Positives = 80/156 (51%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+LATNIAE+S+TI + YVID + ++ ++S + S++ A QR GR G
Sbjct: 750 RKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAG 809
Query: 214 RTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
R G+ +RL TK +++ LE+ P I + K++ ++L +D
Sbjct: 810 RVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILML-----KSLGIDQLLEFDFMD 864
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGR 308
PP E + AL+ L AL ++ RG E T GR
Sbjct: 865 PPPAETIIRALEQL---YALGALNDRG--ELTKIGR 895
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 698 LCHSLKTVISEAGDNPI-PWKEVKCVLWYPSLESYSENLESQKTL 741
LC ++ +S G N I P ++ ++P+ +S +T+
Sbjct: 1004 LCDRVEVTVSSCGSNNIVPIQKAITAGFFPNAARLQRGGDSYRTI 1048
Score = 38 (18.4 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 2 SATADITKYRDYF 14
SAT D K++ YF
Sbjct: 634 SATMDAQKFQSYF 646
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 146 (56.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPL-----SSFFKVHIL--HSSVDTE-Q 142
VL IH +S + +LVFL +E L++ S ++ +L ++++ ++ Q
Sbjct: 612 VLQIHVTQSPGD--VLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQ 669
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + RKV++ATNIAE+S+TI + YVID Q ++ ++S + S+
Sbjct: 670 AKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSR 729
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR GR GR G+ +RL T +F +E+ P I + +S I+
Sbjct: 730 ASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNV---VLLLKSLGIN 786
Query: 262 DPKVLLQKALDPPYPEVVGDALDLL 286
D ++ +DPP E + AL+ L
Sbjct: 787 D--LIHFDFMDPPPHETLVLALEQL 809
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 141 (54.7 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 59/205 (28%), Positives = 98/205 (47%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP----LSSFFK---VHILHSSVDTE-Q 142
VL IH + + ILVFL +E +++ L S + V +++++ ++ Q
Sbjct: 118 VLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ 175
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + RKV++ATNIAE+S+TI + YV+D Q ++ ++S + S+
Sbjct: 176 ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR GR GR G+ +RL T ++ LE+ P I + +S I
Sbjct: 236 ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNV---VLLLKSLGIH 292
Query: 262 DPKVLLQKALDPPYPEVVGDALDLL 286
D ++ LDPP E + AL+ L
Sbjct: 293 D--LMHFDFLDPPPYETLLLALEQL 315
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 141 (54.7 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 59/205 (28%), Positives = 98/205 (47%)
Query: 91 VLHIHKNESDIEKSILVFLPTYYALEQQWHLMKP----LSSFFK---VHILHSSVDTE-Q 142
VL IH + + ILVFL +E +++ L S + V +++++ ++ Q
Sbjct: 118 VLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ 175
Query: 143 ALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + RKV++ATNIAE+S+TI + YV+D Q ++ ++S + S+
Sbjct: 176 ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK 235
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAIXXXXXXXXXXXICCAESKAIS 261
+ A QR GR GR G+ +RL T ++ LE+ P I + +S I
Sbjct: 236 ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNV---VLLLKSLGIH 292
Query: 262 DPKVLLQKALDPPYPEVVGDALDLL 286
D ++ LDPP E + AL+ L
Sbjct: 293 D--LMHFDFLDPPPYETLLLALEQL 315
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 163 (62.4 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 47/134 (35%), Positives = 71/134 (52%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV++ATNIAE+S+TI + YVID Q +D +DS + +SQ+QA+QR GR G
Sbjct: 845 RKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAG 904
Query: 214 RTCDGQVYRLVTKSFFGTLEDHECPA-IXXXXXXXXXXXICCAESKAISDPKVLLQKALD 272
RT G+ +RL T++ + + P I I ++ I+D +L +D
Sbjct: 905 RTGPGKCFRLYTEAAY---QSEMLPTTIPDIQRQNLSHTILMLKAMGIND--LLHFDFMD 959
Query: 273 PPYPEVVGDALDLL 286
PP + AL+ L
Sbjct: 960 PPPTNTMLTALEEL 973
Score = 40 (19.1 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 5/34 (14%), Positives = 16/34 (47%)
Query: 430 WCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFL 463
WC +++ + ++ + +L + R+ K +
Sbjct: 1073 WCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIV 1106
Score = 38 (18.4 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 2 SATADITKYRDYF 14
SAT D K+ +YF
Sbjct: 729 SATLDADKFSEYF 741
WARNING: HSPs involving 47 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 846 819 0.00078 122 3 11 22 0.36 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 297
No. of states in DFA: 626 (67 KB)
Total size of DFA: 436 KB (2208 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.16u 0.11s 65.27t Elapsed: 00:00:03
Total cpu time: 65.20u 0.12s 65.32t Elapsed: 00:00:03
Start: Tue May 21 20:46:54 2013 End: Tue May 21 20:46:57 2013
WARNINGS ISSUED: 2