BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003111
(846 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22243|C3H31_ARATH Zinc finger CCCH domain-containing protein 31 OS=Arabidopsis thaliana
GN=At2g47680 PE=2 SV=2
Length = 1015
Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/852 (62%), Positives = 664/852 (77%), Gaps = 17/852 (1%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSE 60
MSATADIT+YRDYF++LGRGERVEV+AIPS +QRTIFQRRV YLEQV LLGV +S+
Sbjct: 175 MSATADITRYRDYFKELGRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGV----SSD 230
Query: 61 LSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWH 120
LS+ YC GPSPS A+ EIKPE+ LIHDL+L+IH+ E DIEKSILVFLPTYY+LEQQ+H
Sbjct: 231 LSA--YCPGPSPSSADTEIKPELQNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYH 288
Query: 121 LMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCR 180
++P + F+VHILH S+DTEQAL AMKIC+S RKVILATNIAESSVTIPKVAYVIDSCR
Sbjct: 289 QLEPFFASFEVHILHRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCR 348
Query: 181 SLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
SLQVFWD +RK D+ +LVWVS+SQAEQRRGRTGRTCDG+VYRLV +FF LE+HE P+I
Sbjct: 349 SLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSI 408
Query: 241 LRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR 300
L+LSLR QVL ICC ES+AI+D LL KA+DPP P+VV DAL +L +AL+K SPRGR
Sbjct: 409 LKLSLRQQVLHICCTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRK-SPRGR 467
Query: 301 YEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFA 360
YEPTFYGRLLASF LSFDAS+LV+KFGE+GMLR+GILLG+LMDT PLPI HPFGDD+LF
Sbjct: 468 YEPTFYGRLLASFPLSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGDDSLFL 527
Query: 361 EYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKVTA 420
EY YFGG + GR+EMV+M N CAFQFWQ VFKDK RL++L+Q+L ++ K
Sbjct: 528 EYVDHYFGGSKT--ISGGRREMVLMANFCAFQFWQRVFKDKHRLENLKQLLSKEKDKDLK 585
Query: 421 SLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEFEH 480
+ P+IE+EWC H + QSS +HVSELYED L++ HRFRP+F+ +S+ PTYY+PYEF+H
Sbjct: 586 LMFPEIEKEWCDFHNIAQSSFYHVSELYEDTLSSFHRFRPQFISSSDSQPTYYNPYEFDH 645
Query: 481 TCLLNCDPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRV 540
TC + C P D + D ++ P E +KCV+VPFV PN FQ+N +AE +ASIIKEIR
Sbjct: 646 TCYIECQPSEDKYLHSEDVDNNQPPPEVRKCVSVPFVPPNAFQANAIAENMASIIKEIRT 705
Query: 541 QYVEDVSGNQDKAVNGSE--TPGEAPLCVYFINGSCNRGTGCPFSHSLQAKRPACKFFYS 598
Q S N A+ + GEAP+CVYF+NG CNRG C F+H+LQ+ RPACKFF S
Sbjct: 706 QCTPSESDNGHGALEPEDYVEYGEAPVCVYFLNGYCNRGGQCTFTHTLQSTRPACKFFAS 765
Query: 599 LQGCRNGDSCIFSHDLGQPV---LPSSSFTCLPEDGVANAASLLRLFPTSSDGSILLLDD 655
QGCRNG+SC+FSH + + LP CLPE+ ++ + LL LFPTSS+G IL+ DD
Sbjct: 766 SQGCRNGESCLFSHAMRRRTTSYLPPPQ--CLPEEDGSSTSPLLDLFPTSSEGCILVFDD 823
Query: 656 TDMHFSANLACLYDPSRIISTTCLSDSAICDTSLAGIRILWGLCHSLKTVISEAG-DNPI 714
+DMHF++++A Y RI+ST+ S++ CD+SLA RI WGL H +T+IS+AG +NPI
Sbjct: 824 SDMHFTSSIANRYPSWRILSTSSSSETLFCDSSLADTRIFWGLNHPYQTIISKAGRENPI 883
Query: 715 PWKEVKCVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTRVIITMNNIKFAQ 774
PW EVKCVLW+ + +SY++ E QKT++QNFFEH+AIR+L D LY RV++TMNN++F+
Sbjct: 884 PWNEVKCVLWFLNPDSYADTPEKQKTILQNFFEHMAIRLLGDKLYKIRVVLTMNNVRFSL 943
Query: 775 LQVEKLARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTDFQFGD 834
LQVEKLAR+SFFFL ESFP D SFG DT+ ++PMLVSR ISYVF+LHPP+D QFG+
Sbjct: 944 LQVEKLARESFFFLGESFPHDSESFGAFQDTLTIQKPMLVSRPISYVFNLHPPSDIQFGN 1003
Query: 835 YAAVLHRCLRDN 846
Y ++L + L +
Sbjct: 1004 YTSLLRKSLHNK 1015
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/852 (53%), Positives = 590/852 (69%), Gaps = 20/852 (2%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSE 60
MSATADIT+Y+DYFRDLGRGERVEV+AIPS+ + +IFQR+V YLEQ+ ++L +D SE
Sbjct: 170 MSATADITRYKDYFRDLGRGERVEVIAIPSSPRSSIFQRKVLYLEQIVDILKMD----SE 225
Query: 61 LSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWH 120
S +YCSGP+ + A+A +KP+V++LIH L+LHIH+NE DI KSILVFLPTYYALEQQW
Sbjct: 226 SLSTKYCSGPN-TAADAGLKPDVYELIHRLLLHIHQNEPDIGKSILVFLPTYYALEQQWI 284
Query: 121 LMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCR 180
+ SS FKVHILH S+DT++AL MK+ KS RKVILATNIAESSVTIP VAYVIDSCR
Sbjct: 285 RLLSASSMFKVHILHRSIDTDEALQTMKVSKSCRKVILATNIAESSVTIPGVAYVIDSCR 344
Query: 181 SLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAI 240
SLQV+WD RK DSAELVWVS+SQAEQR+GRTGRTCDGQ+YRLVT F+ +L DHE PAI
Sbjct: 345 SLQVYWDPIRKTDSAELVWVSKSQAEQRKGRTGRTCDGQIYRLVTGPFYNSLTDHEYPAI 404
Query: 241 LRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK-ISPRG 299
LRLSLR QVL+ICCAES+A++DP VLLQK LDPP +VV DAL+ L RAL K SPRG
Sbjct: 405 LRLSLREQVLMICCAESRAMNDPHVLLQKVLDPPDSDVVEDALESLVQIRALDKPTSPRG 464
Query: 300 RYEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALF 359
R+EPTFYG LL S LSFDASVL LKFG+ G + EGIL+ I++D QPLPI+ PFG L
Sbjct: 465 RHEPTFYGCLLNSLPLSFDASVLALKFGDTGSICEGILISIMLDIQPLPIVQPFGHQQLC 524
Query: 360 AEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKVT 419
Y YF +G L TG+KE ++GNLCAFQFWQ +FKDK RLD L V+ E K +
Sbjct: 525 KMYRNNYFEEEG-IDLQTGKKEAALVGNLCAFQFWQRMFKDKYRLDCLINVVNTHEPKAS 583
Query: 420 ASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEFE 479
+ K E+EWC+ H LV ++L+++SE+Y+DI+ +HRFRP FL N P Y P EF
Sbjct: 584 NGFVAKPEDEWCAFHNLVPTALNYISEIYDDIMGTLHRFRPSFLVKINP-PMYLQPSEFH 642
Query: 480 HTCL----LNCDPPRDMDPLAADNEHLGPSFEAKKCVAVPFVAPNQFQSNNVAEKLASII 535
H CL L + + PL A+N HL ++C A P+V+P F + V + L ++I
Sbjct: 643 HMCLRHEVLELENVNSL-PLEAENSHLD---SHRRCAATPYVSPADFGTTTVVKTLKTLI 698
Query: 536 KEIRVQYVEDVSGNQDKAVNGSETPG-EAPLCVYFINGSCNRGTGCPFSHSLQAKRPACK 594
KE++ Q D ++ V+G P E +CV+F+NGSCNRG C FSHS +A RP CK
Sbjct: 699 KEMKTQSAADRVTYRE-LVHGYVQPALENEMCVFFLNGSCNRGDTCHFSHSSRAPRPICK 757
Query: 595 FFYSLQGCRNGDSCIFSHDLGQPVLPSSSFTCLPEDGVANAASLLRLFPTSSDGSILLLD 654
FF +LQGCRNG+SC FSHD G V S + ++ A + RL P + DG IL+++
Sbjct: 758 FFLTLQGCRNGNSCSFSHDSGSLVSSSITSGICSQENRATSVCCKRLLPAAGDGHILVMN 817
Query: 655 DTDMHFSANLACLYDPSRIISTTCLSDSAICDTSLAGIRILWGLCHSLKTVISEAGDNPI 714
D + F+ L YDP++II+ T S D+ G++IL L I +
Sbjct: 818 DKSLQFACKLCNYYDPTKIIACTPGPHSFESDSVTKGLKILQNLADPSYLFIGGEHKLSV 877
Query: 715 PWKEVKCVLWYPSLESYSENLESQKTLMQNFFEHLAIRMLADALYDTRVIITMNNIKFAQ 774
PW ++ V W+ ++S +E++ S++ ++Q FF+H+AI+ L++ + D +VI+ MNN KF Q
Sbjct: 878 PWTKLSRVFWFADIDS-NESI-SEQVVLQKFFQHIAIKTLSEKMSDLQVIVIMNNAKFVQ 935
Query: 775 LQVEKLARDSFFFLSESFPFDEMSFGELSDTVNTKRPMLVSRAISYVFDLHPPTDFQFGD 834
LQVE+LAR+ F FL ESF FDE + G SDT N R M VS ++Y+F +HPPT QFGD
Sbjct: 936 LQVERLARECFLFLGESFMFDEATLGWFSDTPNYPRGMQVSAPVAYIFSMHPPTGIQFGD 995
Query: 835 YAAVLHRCLRDN 846
YA+ L + L N
Sbjct: 996 YASELRKVLYSN 1007
>sp|Q3MHU3|TDRD9_RAT Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus
GN=Tdrd9 PE=2 SV=3
Length = 1384
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 164/363 (45%), Gaps = 40/363 (11%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV EQ + + +RK+IL+TN
Sbjct: 389 SVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 448
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ +QR+GR GR G Y
Sbjct: 449 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCY 508
Query: 222 RLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVG 280
RL+ + F+ + + DH P +LR L VL + + + +P+ LL AL PP +
Sbjct: 509 RLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 565
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREG 335
+ LL AL R P TF GR+LA +S L++ G L E
Sbjct: 566 RTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDEC 625
Query: 336 ILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQ 395
+++ + + PF + G N +G + + AF+ WQ
Sbjct: 626 LIIAAALSLKNF-FTMPFRQ----------HLDGYRNKVHFSGSSRSDCLALVEAFRAWQ 674
Query: 396 HVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAV 455
+ + L H PK E +W L+Y+ + V+ELYE++ N +
Sbjct: 675 -ACRQRGELRH-----------------PKDELDWGRLNYIQIKRIREVAELYEELKNRI 716
Query: 456 HRF 458
+F
Sbjct: 717 SQF 719
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 173/382 (45%), Gaps = 41/382 (10%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATN 161
S+LVFLP + L+ + +V+ LHSSV EQ + + +RK+IL+TN
Sbjct: 388 SVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 447
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ +QR+GR GR G Y
Sbjct: 448 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCY 507
Query: 222 RLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVG 280
RL+ + F+ + + DH P +LR L +L + + + +P+ LL AL PP +
Sbjct: 508 RLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPSLSDIE 564
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREG 335
+ LL AL R P TF GR+LA +S LV+ G L E
Sbjct: 565 RTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDEC 624
Query: 336 ILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQ 395
+++ + + PF + G N +G + + AF+ WQ
Sbjct: 625 LIIAAALSLKNF-FTMPFRQ----------HLDGYRNKVHFSGSSRSDCLALVEAFRAWQ 673
Query: 396 HVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAV 455
+QR + + PK E +W L+Y+ + V+ELYE++ N +
Sbjct: 674 AC---RQRGELRR---------------PKDELDWGRLNYIQIKRIREVAELYEELKNRI 715
Query: 456 HRFRPKFLGTSNGLPTYYDPYE 477
+F F+G + + PY+
Sbjct: 716 SQFN-MFVGPHHPVLDQEYPYK 736
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 193/404 (47%), Gaps = 54/404 (13%)
Query: 1 MSATADITKYRDYF------RDLGRGERVEVLAIPSTNQRTIF---------QRRVSYLE 45
MSAT D K+ YF R GR VEV + + T F Q+ + E
Sbjct: 732 MSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEE 791
Query: 46 QVT--------------ELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLV 91
++T E + V G + EL+ A + P HK+ DL+
Sbjct: 792 EITINVTSKAGGVKKYQEYIPVQSGASPELNPFYQKYSSRTQHAILYMNP--HKINLDLI 849
Query: 92 LH--IHKNES----DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTE 141
L ++ ++S +IE ++L+FLP ++Q + L+ F+ +V LHS + T+
Sbjct: 850 LELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQ 909
Query: 142 -QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
QA M RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +V
Sbjct: 910 DQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFV 969
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAI 260
S++ A QR+GR GR DG +RL T+ F D+ P ILR+ L L I + +
Sbjct: 970 SKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCD---L 1026
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDAS 320
P+ L KALDPP +V+ +A++LL A + P+ T G+ LA+ ++
Sbjct: 1027 GSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPK----LTPLGQHLAALPVNVKIG 1082
Query: 321 VLVLKFGEI-GMLREGILLGILMDTQPLPILHPFG--DDALFAE 361
+++ FG I G L L +M T+ P + P G D+A A+
Sbjct: 1083 KMLI-FGAIFGCLEPVATLAAVM-TEKSPFITPIGRKDEADLAK 1124
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 163/363 (44%), Gaps = 40/363 (11%)
Query: 104 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATN 161
S+LVFLP + L+ L +V+ LHSSV EQ + + +RK+IL+TN
Sbjct: 387 SVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTN 446
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C + + D + S L W S++ QR+GR GR G Y
Sbjct: 447 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCY 506
Query: 222 RLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLV K F+ ++ DH P +LR L +L + + + +P+ LL AL PP +
Sbjct: 507 RLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPGLSDIE 563
Query: 281 DALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREG 335
+ LL AL R P TF GR+LA ++ L++ G L E
Sbjct: 564 RTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDEC 623
Query: 336 ILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQ 395
+++ + + FA + G N +G + + + AF+ W+
Sbjct: 624 LIIAAALSLK-----------NFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWK 672
Query: 396 HVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAV 455
+ + L++ PK E W L+Y+ + V+ELYE++ +
Sbjct: 673 ACRQTGE--------LRY----------PKDELNWGRLNYIQIKRIREVAELYEELKTRI 714
Query: 456 HRF 458
+F
Sbjct: 715 SQF 717
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 194/402 (48%), Gaps = 50/402 (12%)
Query: 1 MSATADITKYRDYF------RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELL 51
MSAT D K+ YF R GR VEV + + T + ++ Y ++ + E
Sbjct: 733 MSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEE 792
Query: 52 GVDHGMTSELSSLRYCSG--PSPSMANAEIKP----------------EVHKLIHDLVLH 93
V +TS+ ++ P + A+A++ P HK+ DL+L
Sbjct: 793 EVTINVTSKAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILE 852
Query: 94 I--HKNES----DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQA 143
+ + ++S +IE ++L+FLP ++Q + L+ F+ KV LHS + T+
Sbjct: 853 LLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQ 912
Query: 144 LMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQ 202
A + RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS+
Sbjct: 913 AAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Query: 203 SQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISD 262
+ A QR+GR GR DG +R+ T+ F D+ P ILR+ L L I +
Sbjct: 973 ASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCN---LGS 1029
Query: 263 PKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVL 322
P+ L KALDPP +V+ +A++LL A + P+ T G+ LA+ ++ +
Sbjct: 1030 PEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPK----LTPLGQHLAALPVNVKIGKM 1085
Query: 323 VLKFGEI-GMLREGILLGILMDTQPLPILHPFG--DDALFAE 361
++ FG I G L L +M T+ P P G D+A A+
Sbjct: 1086 LI-FGAIFGCLDPVATLAAVM-TEKSPFTTPIGRKDEADLAK 1125
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 37/303 (12%)
Query: 97 NESDIEKSILVFLPTYYALEQQWHLMKPLSS--------FFKVHILHSSVDTEQALMAMK 148
N+S E SIL+FLP + ++K +++ + H L SS D +
Sbjct: 360 NQSLREGSILIFLPGVGEINNMSDMLKDMANHDSIMKFNMVRCHSLMSSDDQREIFQPSP 419
Query: 149 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 208
+RK+I+ATN+AESS+T+P V+Y+ID C +F D S LVW S++ QR
Sbjct: 420 --PGYRKIIMATNVAESSITVPDVSYIIDFCLEKVLFTDTFTNFSSLRLVWASKTNCRQR 477
Query: 209 RGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLL 267
GR GR +G+VYR+VTKSF+ L ++ P +LR L+ VL A+ + P +L
Sbjct: 478 AGRVGRLRNGRVYRMVTKSFYQRELSEYSVPEMLRSPLQNCVL---KAKELKMGTPVEML 534
Query: 268 QKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVL 322
AL PP + + + LL AL + G Y+P T++G +++ L S L
Sbjct: 535 ALALSPPNLSDICNTILLLKEVGALFP-TVDGTYDPCDGDITYWGTIMSKLPLDTRLSRL 593
Query: 323 VLKFGEIGMLREGILL-------GILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRL 375
++ +L E I++ GI +D+ L G D Y Y DG+
Sbjct: 594 IILGYIFNLLDEAIIIAAGLTVRGIFVDSTRL------GSD----NYWMHYVFADGSGSD 643
Query: 376 LTG 378
L G
Sbjct: 644 LVG 646
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 166/379 (43%), Gaps = 46/379 (12%)
Query: 104 SILVFLPTYYALE-QQWHLMKPLSSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATN 161
S+LVFLP ++ + L K + +V+ LHS+V EQ + + +RK+IL+TN
Sbjct: 346 SVLVFLPGLAEIQYMKEALSKLVRKRLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILSTN 405
Query: 162 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 221
IAESSVT+P V YVID C Q+ D + W S++ QRRGR GR G Y
Sbjct: 406 IAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCY 465
Query: 222 RLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVG 280
RLVT+ F+ + + P +LR L +L + + + DP+ +L AL PP ++G
Sbjct: 466 RLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLD---MGDPRSVLSTALTPP---ILG 519
Query: 281 DALDLLDHKRALQKISPRGRYEP------TFYGRLLASFSLSFDASVLVLKFGEIGMLRE 334
D + + + +S + + TF GR+LA + L++ G L E
Sbjct: 520 DIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEE 579
Query: 335 GILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFW 394
+++ + + + FA + G + + + AF+ W
Sbjct: 580 CLIIAASLSLK-----------SFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAW 628
Query: 395 QHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNA 454
+ + K L H PK E EW + + + V+EL+ED+
Sbjct: 629 -YTSRAKGELRH-----------------PKDELEWGKENCIQIKRIREVAELFEDLKKR 670
Query: 455 VHRFRPKFLGTSNGLPTYY 473
V RF +SN PT Y
Sbjct: 671 VSRFNMHISSSSN--PTDY 687
>sp|Q16JS8|SPNE_AEDAE Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti
GN=spn-E PE=3 SV=1
Length = 1374
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 171/367 (46%), Gaps = 37/367 (10%)
Query: 1 MSATADITKYRDYFRDLGRGERVEVLAIP--STNQRTIFQRRVSYLEQVTELLGVDHGMT 58
MSAT D + +YF+ ++V L P S ++ +++ + Y + + +L +D +
Sbjct: 190 MSATIDSKAFAEYFKT---PKKVGYLTAPIISVDRPRLYEVKEFYYDDLDKL-RLDFAID 245
Query: 59 SELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNES-DIEKSILVFLPTYYALEQ 117
E P S + ++ + L+ ++H E + + ++L+FLP +++
Sbjct: 246 YE--------NPGISSHMYTVAAKLVLVCDRLIENMHGEERMEYKPTVLIFLPGINEIDR 297
Query: 118 QWHLMKPLSSF---------FKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSV 167
H+++ + +H LHS + EQ + K RKVIL+TNIAESS+
Sbjct: 298 MDHVLRETLTRIVNPKEKPNLDIHRLHSILPADEQVKVFRKPAPGQRKVILSTNIAESSI 357
Query: 168 TIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS 227
T+P V ++ID C +F D + W SQ+ QR+GR GR DG+VYRLV +
Sbjct: 358 TVPDVKFIIDFCLQRVLFTDTTTNFSTLRTEWASQANCIQRQGRAGRVMDGRVYRLVDRR 417
Query: 228 FF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPP-YPEVVGDALDL 285
F+ + P ILR L +L E + P +L A++PP ++ L L
Sbjct: 418 FYENQMRFSTSPEILRCPLENVILKAKLLE---MGPPHSILALAMNPPDLSDIRNTVLQL 474
Query: 286 LDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGI 340
+ +Q + +G YE T+ GR++A L S L++ +L E I++
Sbjct: 475 KELGALVQTV--KGNYEQLDGDLTYMGRIMAKLPLDLRISKLIILGYIFSVLEESIIIAA 532
Query: 341 LMDTQPL 347
M+ + +
Sbjct: 533 GMNEKNI 539
>sp|B4GEU5|SPNE_DROPE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
persimilis GN=spn-E PE=3 SV=1
Length = 1434
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 135/272 (49%), Gaps = 27/272 (9%)
Query: 97 NESDIEKSILVFLPTYYALEQQWHLMK------PLSSF--FKVHILHSSVDTEQALMAMK 148
N+S E SIL+FLP + ++K P+ F + H L +S D +
Sbjct: 361 NQSLREGSILIFLPGVGEINNMSDMLKDMANHDPIMKFNMVRCHSLMTSEDQREIFQPSP 420
Query: 149 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 208
+RK+I+ATN+AESS+T+P V+Y+ID C + D + S L W S++ QR
Sbjct: 421 --PGYRKIIMATNVAESSITVPDVSYIIDFCLEKVLVTDTSTNFSSLRLAWASKTNCRQR 478
Query: 209 RGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLL 267
GR GR +G+VYR+VTKSF+ L ++ P +LR L+ VL A+ + P +L
Sbjct: 479 AGRVGRLRNGRVYRMVTKSFYQRELSEYSVPEMLRSPLQNCVL---KAKELKMGTPVEML 535
Query: 268 QKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVL 322
AL PP + + + +L AL + G Y+P T++G +++ L S L
Sbjct: 536 ALALSPPNLSDICNTILMLKEVGALFP-TMDGTYDPRDGDITYWGTIMSKLPLDTHLSRL 594
Query: 323 VLKFGEIGMLREGILL-------GILMDTQPL 347
++ ++ E I++ GI +D+ L
Sbjct: 595 IILGYVFNLVDEAIIIAAGLTVRGIYIDSARL 626
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 185/399 (46%), Gaps = 57/399 (14%)
Query: 1 MSATADITKYRDYF------RDLGRGERVEVLAIPSTNQRTIF---------QRRVSYLE 45
MSAT D K+ YF R GR VEV + + T F Q+ + E
Sbjct: 727 MSATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLEDVVEATGFVLEQDSEYCQKFLEDEE 786
Query: 46 QVT--------------ELLGVDHGMTSELSSL--RYCSGPSPSMANAEIKPEVHKLIHD 89
++T E + G +L + RY S +A + +K+ D
Sbjct: 787 EITLSVTGKGGSSKKYQEFIPAQSGTGLDLGARYQRYSS----QTRHAVLYMNPNKINLD 842
Query: 90 LVLH------IHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSSV 138
L+L I ++E ++L+FLP ++Q + ++ F +K+ LHS +
Sbjct: 843 LILELLVFLDISPEYRNVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIALHSIL 902
Query: 139 DTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAEL 197
++ QA + RK++LATNIAE+ +TIP V +VID+ R+ + + + ++ S
Sbjct: 903 SSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVE 962
Query: 198 VWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAES 257
++S++ A QR+GR GR +G +RL T+ F + ++ P ILR+ L L I +
Sbjct: 963 TFISKASALQRQGRAGRVRNGYCFRLYTRERFESFMEYSVPEILRVPLEELCLHIMKCD- 1021
Query: 258 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSF 317
+ P+ L KALDPP +V+ +A+ LL A + P+ T G+ LA+ ++
Sbjct: 1022 --LGSPEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPK----LTPLGQHLAALPVNV 1075
Query: 318 DASVLVLKFGEI-GMLREGILLGILMDTQPLPILHPFGD 355
+++ FG I G L L M T+ P + P G+
Sbjct: 1076 KIGKMLI-FGAIFGCLDAVATLAATM-TEKSPFVTPIGE 1112
>sp|B4K5R2|SPNE_DROMO Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
mojavensis GN=spn-E PE=3 SV=1
Length = 1431
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 146/308 (47%), Gaps = 25/308 (8%)
Query: 98 ESDIEKSILVFLPTYYALEQQW-HLMKPLS-------SFFKVHILHSSVDTEQALMAMKI 149
E+ ++L+FLP + ++ H+ + + S + H L S E+ + +
Sbjct: 361 EAKRTGAVLIFLPGIHEIDTMAEHIGRIVDENPNFKISIVRCHSLMSPDSQEEVFLPPPL 420
Query: 150 CKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 209
HRKVIL TNI+ESS+T+P V+YVID C + + D S L W S+ QR
Sbjct: 421 --GHRKVILTTNISESSITVPDVSYVIDFCLTKVLHTDTASNFSSLRLEWASKVNCRQRA 478
Query: 210 GRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQ 268
GR GR G+VYR+VTK F+ + + P +LR L+ VL A+ + +P +L
Sbjct: 479 GRVGRLRSGRVYRMVTKDFYMNHMNEFGIPEMLRSPLQNSVL---KAKELEMGNPSEILA 535
Query: 269 KALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLV 323
A+ PP + + + LL AL + G YE +F+G++++ F L S L+
Sbjct: 536 LAMSPPNLSDIQNTVLLLKEVGALY-TTVDGVYEELDGDLSFWGKIMSKFPLDVRLSRLI 594
Query: 324 LKFGEIGMLREGILLGILMDTQPLPILHPFG--DDALFAEYTGCYFGGDGNTRLLTGRKE 381
+ L E I++ M + L + G ++A + Y + G G+ + R
Sbjct: 595 ILGYVFNCLDEAIVIAAGMTVRSLYVTGSRGQMNEAFWMHY--IFADGSGSDMIGIWRVY 652
Query: 382 MVIMGNLC 389
+ + N+C
Sbjct: 653 RIYL-NMC 659
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle
PE=2 SV=2
Length = 1293
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 194/443 (43%), Gaps = 72/443 (16%)
Query: 1 MSATADITKYRDYF------RDLGRGERVEVLAIPSTNQRTIF------QRRVSYLEQVT 48
MSAT D TK+ YF GR V+ + Q T F +R+ +E
Sbjct: 538 MSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEE 597
Query: 49 ELLGVDHGMT----SELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKS 104
+LL D +++ +Y +MA +L+ L++HI +I +
Sbjct: 598 QLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKS--KNIPGA 655
Query: 105 ILVFLPTYYALEQQWHLMKPL--------SSFFKVHILHSSV-DTEQALMAMKICKSHRK 155
ILVFLP + + + LMK L +S +++ HS + EQ + + + K
Sbjct: 656 ILVFLPGWNLI---FALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTK 712
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+IL+TNIAE+S+TI + +VID C++ + + + S VW S++ EQR+GR GR
Sbjct: 713 IILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRV 772
Query: 216 CDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPY 275
G + L +++ F LED+ P + R L L I +I L KAL+PP
Sbjct: 773 RPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHH---FLSKALEPPP 829
Query: 276 PEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREG 335
+ V +A LL R L E T GRLLA + + G++
Sbjct: 830 VDAVIEAEVLLREMRCLD-----ANDELTPLGRLLARLPIE-------PRLGKM------ 871
Query: 336 ILLGILMDTQPLPILHPFGDDALFAEYTGCY---FGGD-GNTRL------LTGRKEMVIM 385
++LG + L A+ A Y+ + F D G RL L+G K +
Sbjct: 872 MVLGAVFGCADLM--------AIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHV 923
Query: 386 GNLCAFQFWQHVFKDKQRLDHLQ 408
+ A Q W+ ++KQR +H++
Sbjct: 924 AMIVASQMWR---REKQRGEHME 943
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 148/349 (42%), Gaps = 58/349 (16%)
Query: 1 MSATADITKYRDYFRDLG------RGERVEVLAIPS-TNQRTIFQRRVSYLEQVTELLGV 53
MSATAD + Y D G R VE++ PS T + ++ R SY V ++
Sbjct: 455 MSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKM--- 511
Query: 54 DHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYY 113
+ IHK E E +IL FL +
Sbjct: 512 -------------------------------------AVEIHKTEK--EGTILAFLTSQA 532
Query: 114 ALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVA 173
+E W + ++ LH + E+ M + RKVI ATNIAE+S+TIP V
Sbjct: 533 EVE--WACERFVAPSAIALPLHGKLSFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVK 590
Query: 174 YVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLE 233
YVIDS + ++ + ++ VSQS A QR GR GRT G+ YRL +K+ F ++
Sbjct: 591 YVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMN 650
Query: 234 DHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ 293
++ P I R+ L + +L + A+ + + +D P PE + A+ L A+
Sbjct: 651 LNQEPEIRRVHLGVALLRML-----ALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAV- 704
Query: 294 KISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILM 342
+ G E T G L L L+L M +EGI+L +M
Sbjct: 705 -VEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVM 752
>sp|B4HLH4|SPNE_DROSE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
sechellia GN=spn-E PE=3 SV=1
Length = 1434
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK+ILATNIAESS+T+P V+YVID C + D S L W S++ QR GR G
Sbjct: 423 RKIILATNIAESSITVPDVSYVIDFCLTKVKVTDTASSFSSLRLTWASKANCRQRAGRVG 482
Query: 214 RTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
R G+VYR+V K F+ + + P +LRL L+ VL A+ + P +L AL
Sbjct: 483 RLRSGRVYRMVNKHFYQREMAEFGIPEMLRLPLQNSVLK---AKVLNMGSPMEILALALS 539
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFG 327
PP + + + LL AL ++ G Y+ T++G ++A L S L++
Sbjct: 540 PPNLSDIQNTILLLKEVGALY-LTVDGVYDALDGDLTYWGTIMARLPLDTRQSRLIILGY 598
Query: 328 EIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGN 372
ML E I++ + T L H G L + Y DG+
Sbjct: 599 IFNMLEEAIIIAAGLSTNGL-FAHDGGRTQLGDSFWMHYIFADGS 642
>sp|Q9VF26|SPNE_DROME Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
melanogaster GN=spn-E PE=2 SV=1
Length = 1434
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK+IL TNIAESS+T+P V+YVID C + D S L W S++ QR GR G
Sbjct: 423 RKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVG 482
Query: 214 RTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
R G+VYR+V K F+ + + P +LRL L+ VL A+ + P +L AL
Sbjct: 483 RLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLK---AKVLNMGSPVEILALALS 539
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFG 327
PP + + + LL AL ++ G Y+P T++G +++ L S L++
Sbjct: 540 PPNLSDIHNTILLLKEVGALY-LTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGY 598
Query: 328 EIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGN 372
ML E I++ + T P H G L + Y DG+
Sbjct: 599 IFNMLEEAIIIAAGLST-PGLFAHEGGRSQLGDSFWMHYIFSDGS 642
>sp|B0XDC4|SPNE_CULQU Probable ATP-dependent RNA helicase spindle-E OS=Culex
quinquefasciatus GN=spn-E PE=3 SV=1
Length = 1396
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 143/313 (45%), Gaps = 30/313 (9%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK---------VHILHSSVDTE-QALMAMKICKSH 153
SI++FLP +E+ ++ L + + + LHS++ + Q + K +
Sbjct: 305 SIIIFLPGINEIEKMEGALEKLIASIQNAAQRPNLLIMKLHSTLPADDQTAVFRKPGPNQ 364
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKVIL+TNIAESS+T+P + +VID C + D + W S+S QR GR G
Sbjct: 365 RKVILSTNIAESSITVPDIKFVIDFCLQRILVTDTLTNFSTLRTEWASKSNCIQRAGRAG 424
Query: 214 RTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
R G+VYRLV + FF ++ P ILR L VL E + P +L A+
Sbjct: 425 RLMSGRVYRLVDRRFFENNMDVSTSPEILRCPLETVVLKAKLLE---MGTPPSILALAMA 481
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFG 327
PP + + + + LL A+ + + +G Y+ T+ GR+++ L S L++
Sbjct: 482 PPNLDDIRNTILLLKEVGAMLR-TVKGNYDQLDGDLTYLGRIMSKLPLDIRISKLIMLGY 540
Query: 328 EIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGN 387
++ E + +G M+ + + F + Y+ + DG +G + I+
Sbjct: 541 IFSVMEEAVTIGAGMNVKNI-----FLNQNSVKTYSQKMYWADG-----SGSDAIAILNA 590
Query: 388 LCAFQFWQHVFKD 400
A++ Q D
Sbjct: 591 YTAWKSRQEQAGD 603
>sp|Q7QCW2|SPNE_ANOGA Probable ATP-dependent RNA helicase spindle-E OS=Anopheles gambiae
GN=spn-E PE=3 SV=5
Length = 1463
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 171/376 (45%), Gaps = 59/376 (15%)
Query: 1 MSATADITKYRDYFRDLGRGER-VEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTS 59
MSAT + +++ YF+ G LA+ + Q + V YLE + E L VD +
Sbjct: 274 MSATIESSEFAQYFKIPGPNSLFAPQLAVSNVTQHDV---SVYYLEDL-EKLRVDFTIKY 329
Query: 60 ELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--------IHKNES----DIEKSILV 107
E +P+VH+ ++ L I + ES D + SI++
Sbjct: 330 E-------------------QPDVHEKMYFLAAKVAVVCDRFIDEFESASTIDYKPSIIM 370
Query: 108 FLPTYYALEQQWHLMKPL----------SSFFKVHILHSSVDTE-QALMAMKICKSHRKV 156
FLP +E+ +++ + F + LHS + +E QAL+ K +RKV
Sbjct: 371 FLPGINEIERMAEVLRNFLGDSNVNSQEQTKFTILKLHSMLPSEEQALVFTKPSPGYRKV 430
Query: 157 ILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTC 216
IL+TNIAESS+TIP V +VID C + D + W S++ QR GR GR
Sbjct: 431 ILSTNIAESSITIPDVKFVIDFCLHRVLVADTLNNFTTLRTQWASRNNCIQRAGRCGRVM 490
Query: 217 DGQVYRLVTKSFF--GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPP 274
+G+VYRLV K FF G + E P ++R L VL + + P +L A+ PP
Sbjct: 491 NGRVYRLVNKHFFEHGMAQSIE-PEMVRCPLSNVVLKTKLLD---MGPPHTILALAMSPP 546
Query: 275 YPEVVGDALDLLDHKRALQKISPRGRY-----EPTFYGRLLASFSLSFDASVLVLKFGEI 329
V + + L AL + + +G Y + T+ G ++++ L + LV+
Sbjct: 547 NLSDVSNTVLQLKELGALLR-TAKGVYDLQDGDITYLGNIMSTLPLDIHLAKLVVLGYVF 605
Query: 330 GMLREGILLGILMDTQ 345
+L E I++ M+ +
Sbjct: 606 SVLEEAIVIAAGMNVK 621
>sp|B3M383|SPNE_DROAN Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
ananassae GN=spn-E PE=3 SV=1
Length = 1429
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 97 NESDIEKSILVFLPTYYALEQQWHLM------KPLSSFFKVHILHSSVDTEQALMAMKIC 150
+++ + ++L+FLP Y ++ + +P F V Q +
Sbjct: 355 DDAKSQGAVLIFLPGIYEIDNMAESLGNMTKEEPSMKLFIVRCFSLMTPDAQRDVFSPPP 414
Query: 151 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRG 210
RK+ILATNIAESS+T+P V+YVID C + + D S L W S++ QR G
Sbjct: 415 SGFRKIILATNIAESSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAG 474
Query: 211 RTGRTCDGQVYRLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQK 269
R GR G+VYR+V K F+ T + + P +LRL L+ VL A+ I+ P +L
Sbjct: 475 RVGRLRSGRVYRMVHKLFYKTNMTEFGVPEMLRLPLQNSVL---KAKLLDIAPPIEMLAL 531
Query: 270 ALDPPYPEVVGDALDLLDHKRALQKISPRGRY-----EPTFYGRLLASFSLSFDASVLVL 324
AL PP + + + LL AL + G Y + TF+G +++ L S L++
Sbjct: 532 ALSPPNLSDIQNTILLLKEVGALFP-TVDGEYCEVDGDITFWGIIMSRLPLDTRLSRLII 590
Query: 325 KFGEIGMLREGILLG 339
+L E I++
Sbjct: 591 LGYVFNLLEEAIVIA 605
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 20/252 (7%)
Query: 73 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSF 128
SMA K +LI L+L+I ++ ++LVFLP + + Q HL M P S
Sbjct: 620 SMAQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHR 677
Query: 129 FKVHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+++ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 678 YQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFT 737
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRL 247
+ + + VW S++ EQR+GR GR G + L +++ F LE H P + R L
Sbjct: 738 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 797
Query: 248 QVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR---- 300
L I I L KA++PP + V +A L LD A +++P GR
Sbjct: 798 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 854
Query: 301 --YEPTFYGRLL 310
EP F G+++
Sbjct: 855 LPIEPRF-GKMM 865
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 20/264 (7%)
Query: 98 ESDIEKSILVFLPTYYAL----EQQWHLMKPLSSFFKVHIL--HS--SVDTEQALMAMKI 149
E+ S+L+FLP + E H+M S K+ I+ HS S D+++ + +
Sbjct: 361 EAKRTGSVLIFLPGVNEIDTMAEHIEHVMNE-SPNIKITIVRCHSLMSSDSQEDVFQPPL 419
Query: 150 CKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRR 209
HRKVIL TNIAESS+T+ V+YVID C + + D L W S+ QR
Sbjct: 420 S-GHRKVILTTNIAESSITVTDVSYVIDFCLAKVMHIDTASNFSCLCLEWASKVNCRQRA 478
Query: 210 GRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQ 268
GR GRT G+VYR+VTK+F+ +++ P +LR L+ VL A+ + P +L
Sbjct: 479 GRVGRTRSGRVYRMVTKAFYMEEMQEFGIPEMLRSPLQSSVLK---AKELDMGGPSEILA 535
Query: 269 KALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLV 323
A+ PP + + + LL AL + G YE T++G +++ F L S L+
Sbjct: 536 LAMSPPNLTDIHNTVLLLKEVGALY-TTVDGVYEQLDGDLTYWGTIMSRFPLDVRLSRLI 594
Query: 324 LKFGEIGMLREGILLGILMDTQPL 347
+ L E I++ M + L
Sbjct: 595 ILGYIFNCLDEAIIIAAGMSVRSL 618
>sp|B4PRJ9|SPNE_DROYA Probable ATP-dependent RNA helicase spindle-E OS=Drosophila yakuba
GN=spn-E PE=3 SV=1
Length = 1436
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK+IL TNIAESS+T+P V+YVID C + + D S L W S++ QR GR G
Sbjct: 421 RKIILTTNIAESSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAGRVG 480
Query: 214 RTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
R G+VYR+V KSF+ + + P +LRL L+ VL A+ + P +L AL
Sbjct: 481 RLRSGRVYRMVNKSFYQREMSEFGIPEMLRLPLQNSVLR---AKELEMGSPVEILALALS 537
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRY-----EPTFYGRLLASFSLSFDASVLVLKFG 327
PP + + + LL AL ++ G Y + T++G +++ L S L++
Sbjct: 538 PPNLSDIQNTILLLKEVGAL-FLTVDGVYNAMDGDVTYWGTIMSRLPLDPRLSRLIILGY 596
Query: 328 EIGMLREGILLG 339
+L E I++
Sbjct: 597 VFNLLEEAIIMA 608
>sp|B3P3W1|SPNE_DROER Probable ATP-dependent RNA helicase spindle-E OS=Drosophila erecta
GN=spn-E PE=3 SV=1
Length = 1432
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK+IL TNIAESS+T+P V+YVID C + + D S L W S++ QR GR G
Sbjct: 421 RKIILTTNIAESSITVPDVSYVIDFCLTKVLVTDTATSFSSLRLTWASKANCRQRAGRVG 480
Query: 214 RTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
R G+VYR+V KSF+ + + P +LR+ L+ VL A+ + P +L AL
Sbjct: 481 RLRSGRVYRMVNKSFYQREMAEFGIPEMLRMPLQNSVLR---AKELEMGSPIEILALALS 537
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFG 327
PP + + + LL AL ++ G Y T++G +++ L S L++
Sbjct: 538 PPNLSDIQNTILLLKEVGAL-FLTVDGVYNAMDGDITYWGTIMSRLPLDTRLSRLIILGY 596
Query: 328 EIGMLREGILLG 339
+L E I++
Sbjct: 597 VFNLLEEAIIIA 608
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 123/252 (48%), Gaps = 20/252 (7%)
Query: 73 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSF 128
SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M P S
Sbjct: 623 SMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHR 680
Query: 129 FKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 681 YQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFT 740
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRL 247
+ + + VW S++ EQR+GR GR G + L +++ F LE H P + R L
Sbjct: 741 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 800
Query: 248 QVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR---- 300
L I I L KA++PP + V +A L LD A +++P GR
Sbjct: 801 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 857
Query: 301 --YEPTFYGRLL 310
EP F G+++
Sbjct: 858 LPIEPRF-GKMM 868
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 123/252 (48%), Gaps = 20/252 (7%)
Query: 73 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL-EQQWHL-MKPL--SSF 128
SM+ K +LI L+ +I ++ ++LVFLP + + Q HL M P S
Sbjct: 623 SMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHR 680
Query: 129 FKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 681 YQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFT 740
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRL 247
+ + + VW S++ EQR+GR GR G + L +++ F LE H P + R L
Sbjct: 741 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHE 800
Query: 248 QVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR---- 300
L I I L KA++PP + V +A L LD A +++P GR
Sbjct: 801 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAK 857
Query: 301 --YEPTFYGRLL 310
EP F G+++
Sbjct: 858 LPIEPRF-GKMM 868
>sp|B4NBB0|SPNE_DROWI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
willistoni GN=spn-E PE=3 SV=1
Length = 1432
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 136/287 (47%), Gaps = 28/287 (9%)
Query: 104 SILVFLPTYYALEQQW----HLMKPLSSFFKVHIL--HS--SVDTEQALMAMKICKSHRK 155
S+L+FLP ++ H+M+ + KV I+ HS + D+++ + A +RK
Sbjct: 366 SVLIFLPGINEIDNMAESIDHVMQE-NPALKVSIIRCHSLMTPDSQRDVFASPPV-GYRK 423
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+IL TNIAESS+T+P V+YVID C + + D S LVW S+S QR GR GR
Sbjct: 424 IILTTNIAESSITVPDVSYVIDFCLAKVLVTDTATNFSSLRLVWASKSNCRQRAGRVGRL 483
Query: 216 CDGQVYRLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPP 274
G+VYR+V KSF+ + + P +LR L VL A+ + P +L AL PP
Sbjct: 484 RSGRVYRMVPKSFYMKHMLEFGVPEMLRSPLESSVL---KAKELNMGPPIEMLALALSPP 540
Query: 275 YPEVVGDALDLLDHKRALQKISPRGRY-----EPTFYGRLLASFSLSFDASVLVLKFGEI 329
+ + + LL AL + G Y + T +G ++ L S LVL
Sbjct: 541 KLSDIRNTILLLKEVGALYP-TVDGNYVELDGDLTPWGSIMTRLPLDIRLSRLVLLGYVF 599
Query: 330 GMLREGILLGILMDTQPLPILHPFGDDALFAEYTGC---YFGGDGNT 373
L E I++ + + L + +A F Y Y DG++
Sbjct: 600 NCLDEAIVMAAGLSVRGL-----YLQEAGFQSYEAYWMHYVFADGSS 641
>sp|B4LX81|SPNE_DROVI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila virilis
GN=spn-E PE=3 SV=1
Length = 1433
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 153 HRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRT 212
HRK+IL TNIAESS+T+P V+YVID C + + D L W S+ QR GR
Sbjct: 422 HRKIILTTNIAESSITVPDVSYVIDFCLTKVLHTDTATNYSCLRLEWASKVNCRQRAGRV 481
Query: 213 GRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKAL 271
GR G+VYR+V+K+F+ +++ P +LR L+ VL A+ + P +L A+
Sbjct: 482 GRLRSGRVYRMVSKAFYLEEMKEFGIPEMLRSPLQNSVL---KAKELEMGRPSEILALAM 538
Query: 272 DPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKF 326
PP + + + LL AL + G YE T++G +++ F L S L++
Sbjct: 539 SPPNLSDIQNTVLLLKEVGALY-TTVDGVYEELDGDLTYWGTIMSRFPLDVRLSRLIILG 597
Query: 327 GEIGMLREGILLGILMDTQPL 347
L E I++ M + L
Sbjct: 598 YVFNCLEEVIVIAAGMTVRSL 618
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 20/252 (7%)
Query: 73 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF---- 128
SM+ K +LI L+ +I ++ ++LVFLP + + ++ S F
Sbjct: 625 SMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLENNSHFGSHR 682
Query: 129 FKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 683 YQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFT 742
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRL 247
+ + + VW S++ EQR+GR GR G + L +++ F LE H P + R L
Sbjct: 743 AHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHE 802
Query: 248 QVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR---- 300
L I I L KA++PP + + +A L LD A +++P GR
Sbjct: 803 IALSIKLLRLGGIGQ---FLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAK 859
Query: 301 --YEPTFYGRLL 310
EP F G+++
Sbjct: 860 LPIEPRF-GKMM 870
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 73 SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSF- 128
SM+ K +LI L+ +I ++ ++LVFLP + YA+++ + S
Sbjct: 625 SMSQLSEKETPLELIEALLKYIET--LNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHS 682
Query: 129 FKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 187
+ + LHS + EQ + + KVIL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 683 YCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFT 742
Query: 188 VNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRL 247
+ + + VW S++ EQR+GR GR G + L +K+ F LE H P I R L
Sbjct: 743 SHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHE 802
Query: 248 QVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR 300
L I I L KA++PP + V +A L LD + +++P GR
Sbjct: 803 VALSIKLLRLGGIGH---FLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGR 855
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 175/427 (40%), Gaps = 64/427 (14%)
Query: 72 PSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPL-SSFFK 130
P E + + H LI LV I SILVFLP + + +K S F+
Sbjct: 784 PRRKKKEYEIDYH-LISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFE 842
Query: 131 VHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 190
V LH+S++T + K + RK+I ATNIAE+S+TI V VIDS R Q+ +DV R
Sbjct: 843 VLPLHASLNTSEQRRCFKTY-TKRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVER 901
Query: 191 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSF--FGTLEDHECPAILRLSLRLQ 248
+ + + W S++ +QRRGR GR G Y+L T+ F G L P +LR +L Q
Sbjct: 902 DLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGML-GQTPPEVLRTALS-Q 959
Query: 249 VLLICCAESKAISDP---------KVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRG 299
V L K S K + +DPP V AL K+ +Q +
Sbjct: 960 VCLNVVPLVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLAL-----KKLIQVGALTV 1014
Query: 300 RYEPTFYGRLLASFSLSFDASVLVLKFGEI-GMLREGILLGILMDTQPLPILHPFGDDAL 358
+ T G L S + L++ FG I G L + + ++ T+ P L
Sbjct: 1015 SEDLTGLGEYLVSLPIDLKLGKLLV-FGSIFGYLEPALTITAILSTKS-PFL-------- 1064
Query: 359 FAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDETKV 418
GD R + ++ Q W V D + + ++L+ K
Sbjct: 1065 ----------GDDEAREIRSKQS----------QGWGDVLADARVYHNWLEILETRGVKK 1104
Query: 419 TASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYDPYEF 478
T +WC +L ++L + + ++ A T+ L +D Y
Sbjct: 1105 TV--------QWCEEMHLHYTTLQQIRQNRNELSEAAQLLEL----TTKKLTGNFDWYST 1152
Query: 479 EHTCLLN 485
E+ +L+
Sbjct: 1153 ENLTVLS 1159
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 114/226 (50%), Gaps = 19/226 (8%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL---SSFFKVHILHSSVDT- 140
LI DLVL I + IL FLP + ++ Q L++ L +S + V +HS++
Sbjct: 697 LITDLVLQIDAHGE--PGGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMM 754
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 755 DQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWV 814
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLL--ICCAESK 258
S+S QRRGR GR G Y L +S + ++ P ILR L V+ I E
Sbjct: 815 SKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKT 874
Query: 259 AISDPKVLLQKALDPPYPEVVGDA------LDLLDHKRALQKISPR 298
A+ L KALD P + V +A + +LD + AL + R
Sbjct: 875 AVE----FLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKR 916
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 13/209 (6%)
Query: 103 KSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSSVDTEQALMAMKIC-KSHRKV 156
K +LVFLP + + L++ + F F +++LHS++ + Q I K RK+
Sbjct: 904 KCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKI 963
Query: 157 ILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTC 216
+L+TNIAE+ VTIP V VID+ ++ ++ R + +VS++ A+QR GR GR
Sbjct: 964 VLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQ 1023
Query: 217 DGQVYRLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPY 275
+G Y L +K T ++ P ILRL+L+ VL + + + D +L KALDPP
Sbjct: 1024 EGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQD---VLGKALDPPS 1080
Query: 276 PEVVGDALDLLDHKRAL---QKISPRGRY 301
+ AL+ L AL +K++ G++
Sbjct: 1081 STNIIRALEKLHQVGALSENEKLTKLGKF 1109
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 163
++L Y +L Q+W ++ PL S V D A + RK IL+TNIA
Sbjct: 395 TVLDAAQAYASLTQRWVVL-PLHSALSVSDQDKVFDVAPAGV--------RKCILSTNIA 445
Query: 164 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 223
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G YRL
Sbjct: 446 ETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRL 505
Query: 224 VTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDAL 283
+S + + P I R++L VL + +S ++ DP+ ++PP P V A+
Sbjct: 506 YAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF--PFIEPPPPASVETAI 560
Query: 284 DLLDHKRAL 292
L + AL
Sbjct: 561 LYLQEQGAL 569
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30
PE=2 SV=1
Length = 1220
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI + IL FLP + ++ Q L + L S + + +HS++
Sbjct: 680 LVTDLVLHI--DARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 737
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 738 DQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 797
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLL--ICCAESK 258
S++ QRRGR GR G Y L +S + + P ILR L VL I E
Sbjct: 798 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKT 857
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 858 AVE----FLSKAVDSPNIKAVDEAVILL 881
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 467 LIAALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 524
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + K RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 525 NQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 584
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P ILR L L I I
Sbjct: 585 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 644
Query: 261 SDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRG 299
+ L + +DPP E V ++ L AL K ++P G
Sbjct: 645 A---YFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLG 683
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI + IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHI--DARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLL--ICCAESK 258
S++ QRRGR GR G Y L +S + + P ILR L VL I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 118/235 (50%), Gaps = 15/235 (6%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
+ILVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 849 AILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTK 908
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D ++ ++S E +VSQ+ A QR+GR GR
Sbjct: 909 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRV 968
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPP 274
G + L T + L + P I R+ L L I E + + + + + ++PP
Sbjct: 969 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPP 1028
Query: 275 YPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEI 329
+ + + + L R L ++P R P Y LAS + L+L FG I
Sbjct: 1029 HTDSLRASKIRL---RDLGALTPDERLTPLGYH--LASLPVDVRIGKLML-FGSI 1077
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSF----FKVHILHSSVDT- 140
LI L+ +I E D +ILVFLP + + L+ F F + LHS + T
Sbjct: 474 LIVALIRYIVLEEED--GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTV 531
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
Q + + RK+++ATNIAE+S+TI V YVID + + +D I + WV
Sbjct: 532 NQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWV 591
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAI 260
S++ A+QR+GR GR G Y L L+D++ P ILR L L I I
Sbjct: 592 SKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGI 651
Query: 261 SDPKVLLQKALDPPYPEVV 279
+ L + +DPP E V
Sbjct: 652 A---YFLSRLMDPPSNEAV 667
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI + IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHI--DARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLL--ICCAESK 258
S++ QRRGR GR G Y L +S + + P ILR L VL I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI + IL FLP + ++ Q L + L S + + +HS++
Sbjct: 677 LVTDLVLHI--DARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 734
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S+T+ + +V+DS + +D+ K+ E VWV
Sbjct: 735 DQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWV 794
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLL--ICCAESK 258
S++ QRRGR GR G Y L +S + + P ILR L VL I E
Sbjct: 795 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 854
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 855 AVE----FLSKAVDSPNIKAVDEAVILL 878
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 86 LIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPLS---SFFKVHILHSSVDT- 140
L+ DLVLHI + IL FLP + ++ Q L + L S + + +HS++
Sbjct: 654 LVTDLVLHI--DARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMM 711
Query: 141 EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWV 200
+Q + + RK++LATNIAE+S TI + +V+DS + +D+ K+ E VWV
Sbjct: 712 DQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWV 771
Query: 201 SQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLL--ICCAESK 258
S++ QRRGR GR G Y L +S + + P ILR L VL I E
Sbjct: 772 SRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKT 831
Query: 259 AISDPKVLLQKALDPPYPEVVGDALDLL 286
A+ L KA+D P + V +A+ LL
Sbjct: 832 AVE----FLSKAVDSPNIKAVDEAVILL 855
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 101/178 (56%), Gaps = 11/178 (6%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RK +++TNIAE+S+TI V +VID S Q ++ +++S + +S++ A QR GR G
Sbjct: 359 RKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAG 418
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
RT G+ +RL T++ +G+ ++D P ILR +L VL + K + ++ +D
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQL-----KKLGTEDLVHFDFMD 473
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEIG 330
PP PE + AL+LL++ LQ I+ G E T G L+A F L + +++ E+
Sbjct: 474 PPAPETLMRALELLNY---LQAINDDG--ELTELGSLMAEFPLDPQLAKMLITSTELN 526
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIA 163
++L TY + Q+W ++ PL S V D + RK IL+TNIA
Sbjct: 393 AVLEAAQTYASHTQRWVVL-PLHSALSVADQDKVFDVAPPGV--------RKCILSTNIA 443
Query: 164 ESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRL 223
E+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQR+GR GRT G +RL
Sbjct: 444 ETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRL 503
Query: 224 VTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDAL 283
+S + + P I R++L VL + +S ++ DP+ ++PP P + A+
Sbjct: 504 YAESDYDAFAPYPVPEIRRVALDSLVLQM---KSMSVGDPRTF--PFIEPPPPASLETAI 558
Query: 284 DLLDHKRAL 292
L + AL
Sbjct: 559 LYLRDQGAL 567
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 23/283 (8%)
Query: 81 PEVHKLIHDLVLHIHKNESDIEKSILVFLP--------TYYALEQQWHLMKP-LSSFFKV 131
P+ K + V+ IH+ E D IL FL +EQ L + + +V
Sbjct: 255 PDYIKSTVETVVKIHQTEGD--GDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRV 312
Query: 132 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 190
+++ + + EQ + ++ +S RKVI+ATN+AE+S+TI + YVID ++
Sbjct: 313 LPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRT 372
Query: 191 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVL 250
I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F L P + R +L +L
Sbjct: 373 AIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVIL 432
Query: 251 LICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRY-EPTFYGRL 309
+ KA+ VL + PP + + AL+LL AL + R EP G
Sbjct: 433 QL-----KALGIDNVLRFHFMSPPPAQSMVQALELL---YALGGLDKDCRLTEP--LGMR 482
Query: 310 LASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHP 352
+A F L+ + ++L+ G G +E + + +M Q + ++ P
Sbjct: 483 IAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPP 525
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 26/269 (9%)
Query: 84 HKLIHDLVLHIHK--NESDIEKSILVFLPTYYALEQQWHLM--KPLSSFFKVHILHSSVD 139
+ L+ +V ++HK ++ SI+VFLP + + +L+ K + F V LHS++
Sbjct: 843 YDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMVLPLHSALT 902
Query: 140 TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV- 198
E K RKV+++TNIAE+S+TI ID+ R+ +F+ N K ++ +L+
Sbjct: 903 PEDQKRVFKKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFY--NPKDNTTKLIE 960
Query: 199 -WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAE 256
++S+++ +QRRGR GR +G Y+L +K+ + + P I R+ L L +
Sbjct: 961 SFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLE---SLYLSVK 1017
Query: 257 SKAISDPKVLLQKALD-PPYP-----EVVGDALDLLDHK-RALQKISPRGRYEPTF---Y 306
+ I D K L ALD PP P E + + L+D ++L ++ P +
Sbjct: 1018 AMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKH 1077
Query: 307 GRLLASFSLSF---DASVLVLKFGEIGML 332
G+LL + + F D SVL++ IG+L
Sbjct: 1078 GKLLI-YGILFGCTDISVLLVSILGIGVL 1105
>sp|Q5UQ96|YL540_MIMIV Putative ATP-dependent RNA helicase L540 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_L540 PE=1 SV=1
Length = 695
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 85 KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQAL 144
+LI DL IH+ I+K +L F+ T Q ++P + +V+ + D ++ L
Sbjct: 246 ELIEDL---IHQQ---IKKDMLFFITTSNEALQLCRSIRP--QYPRVYCVEVYSDMDKNL 297
Query: 145 MA--------MKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 196
+++ +K+++ATN+AESS+TI + YVIDS L +D E
Sbjct: 298 KQYAESRDKYLELGNYDQKLVMATNVAESSLTIDGLVYVIDSGYELSSRFDPECYGQILE 357
Query: 197 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVL-LICCA 255
+VS++QA QRRGR GRT G Y L+TK F L D+ P ILR + + ++ +I +
Sbjct: 358 KKFVSKAQALQRRGRVGRTEPGVCYHLLTKQQFDGLADYPTPDILRQDITMDLIKIIQVS 417
Query: 256 ESKAISDPKVLLQKALDPPYPEVVGDALDLLD 287
+K ++ ++ + +DPP + +L D
Sbjct: 418 PNKTYAEGINMMNQLMDPPLRSHINATRNLFD 449
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 46/322 (14%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI + YV+D S Q ++ +++S + +S++ A+QR GR G
Sbjct: 370 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAG 429
Query: 214 RTCDGQVYRLVT-KSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
RT G+ +RL T ++F L + P ILR +L VL E K + ++ +D
Sbjct: 430 RTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVL-----ELKKLGIDDLVHFDFMD 484
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEIGML 332
PP PE + AL+ L++ L + G P GRL + F L +V+++ E
Sbjct: 485 PPAPETMMRALEELNY---LACLDDEGNLTP--LGRLASQFPLDPMLAVMLIGSFEFQCS 539
Query: 333 REGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQ 392
+E IL + M + P + P D + + DG+ + + N+
Sbjct: 540 QE-ILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGD---------HITLLNVY--- 586
Query: 393 FWQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDIL 452
H FK + ++ +WC HYL SL + +
Sbjct: 587 ---HAFKSDEAYEYGIH-------------------KWCRDHYLNYRSLSAADNIRSQLE 624
Query: 453 NAVHRFRPKFLGTSNGLPTYYD 474
++R+ + T P Y+D
Sbjct: 625 RLMNRYNLELNTTDYESPKYFD 646
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Query: 104 SILVFLPTYYALEQQWHLMKPLSSFFK-------VHILHSSVDTE-QALMAMKICKSHRK 155
++LVFLP ++ + ++ S F +H LHSS+ +E Q + +K K
Sbjct: 851 AVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTK 910
Query: 156 VILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRT 215
+I++TNIAE+S+TI V YVIDS + + +D + ++S E +VSQ+ A QR+GR GR
Sbjct: 911 IIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRV 970
Query: 216 CDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPP 274
G + L T + L + P I R+ L L I E + + + + + ++PP
Sbjct: 971 ASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPP 1030
Query: 275 Y 275
+
Sbjct: 1031 H 1031
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 154 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTG 213
RKV+++TNIAE+S+TI V +VID + Q ++ +++S + +S++ A+QR GR G
Sbjct: 415 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAG 474
Query: 214 RTCDGQVYRLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD 272
RT G+ +RL T+ + T ++D+ P ILR +L VL + K + ++ +D
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL-----KKLGIDDLVHFDFMD 529
Query: 273 PPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVL 324
PP PE + AL+LL++ AL + T G ++A F L + +V+
Sbjct: 530 PPAPETLMRALELLNYLAALNDDG-----DLTELGSMMAEFPLDPQLAKMVI 576
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 312,619,081
Number of Sequences: 539616
Number of extensions: 13224903
Number of successful extensions: 28723
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 28127
Number of HSP's gapped (non-prelim): 542
length of query: 846
length of database: 191,569,459
effective HSP length: 126
effective length of query: 720
effective length of database: 123,577,843
effective search space: 88976046960
effective search space used: 88976046960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)