Query 003112
Match_columns 846
No_of_seqs 302 out of 1107
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 13:43:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bo5_A Histone-lysine N-methyl 99.9 9.5E-25 3.2E-29 231.1 10.8 147 672-846 36-204 (290)
2 1mvh_A Cryptic LOCI regulator 99.9 5.3E-22 1.8E-26 210.9 10.8 83 764-846 125-212 (299)
3 3ooi_A Histone-lysine N-methyl 99.8 1.8E-21 6E-26 199.9 9.5 102 727-846 61-164 (232)
4 3ope_A Probable histone-lysine 99.8 4.3E-21 1.5E-25 195.5 10.2 103 726-846 41-145 (222)
5 3hna_A Histone-lysine N-methyl 99.8 4.3E-21 1.5E-25 203.0 8.1 118 711-846 79-215 (287)
6 1ml9_A Histone H3 methyltransf 99.8 6.3E-21 2.2E-25 202.5 9.0 83 764-846 121-219 (302)
7 3h6l_A Histone-lysine N-methyl 99.8 9.8E-21 3.3E-25 199.6 9.4 102 726-846 86-189 (278)
8 2r3a_A Histone-lysine N-methyl 99.8 6.3E-20 2.2E-24 195.2 7.1 83 764-846 128-214 (300)
9 2w5y_A Histone-lysine N-methyl 99.6 2.1E-16 7E-21 158.7 3.7 84 763-846 39-123 (192)
10 3f9x_A Histone-lysine N-methyl 99.5 1.2E-14 4.3E-19 140.3 7.2 84 763-846 17-106 (166)
11 2f69_A Histone-lysine N-methyl 99.3 1.6E-12 5.5E-17 136.1 6.4 65 775-843 108-174 (261)
12 1h3i_A Histone H3 lysine 4 spe 99.1 4.9E-11 1.7E-15 125.3 6.9 65 775-843 162-228 (293)
13 2qpw_A PR domain zinc finger p 99.1 2.2E-11 7.7E-16 117.9 3.8 73 764-846 18-98 (149)
14 1n3j_A A612L, histone H3 lysin 99.0 1.6E-10 5.5E-15 106.7 4.4 61 775-846 3-63 (119)
15 3ep0_A PR domain zinc finger p 98.7 1E-08 3.5E-13 101.6 5.2 68 773-846 24-100 (170)
16 3dal_A PR domain zinc finger p 98.4 5.3E-08 1.8E-12 98.5 2.3 75 765-846 48-130 (196)
17 3db5_A PR domain zinc finger p 98.4 1.9E-07 6.7E-12 90.4 5.3 76 766-846 14-96 (151)
18 3s8p_A Histone-lysine N-methyl 98.2 2.9E-07 9.9E-12 97.3 1.6 37 783-819 143-179 (273)
19 3rq4_A Histone-lysine N-methyl 97.7 7.9E-06 2.7E-10 85.3 0.6 36 784-819 116-151 (247)
20 3ray_A PR domain-containing pr 97.6 5.5E-05 1.9E-09 78.7 6.6 65 772-846 68-139 (237)
21 3ihx_A PR domain zinc finger p 97.3 4.8E-05 1.6E-09 74.1 0.8 38 775-815 22-59 (152)
22 2llk_A Cyclin-D-binding MYB-li 96.2 0.0036 1.2E-07 54.3 4.0 48 204-254 23-70 (73)
23 2cqr_A RSGI RUH-043, DNAJ homo 95.5 0.015 5E-07 50.5 5.1 53 201-253 15-69 (73)
24 2lr8_A CAsp8-associated protei 94.1 0.0037 1.3E-07 53.8 0.0 45 207-251 17-61 (70)
25 2yum_A ZZZ3 protein, zinc fing 94.4 0.039 1.3E-06 47.1 4.7 50 204-253 8-62 (75)
26 1x41_A Transcriptional adaptor 94.2 0.04 1.4E-06 45.4 4.1 48 204-253 8-56 (60)
27 2yqk_A Arginine-glutamic acid 93.9 0.076 2.6E-06 44.5 5.2 44 554-598 9-52 (63)
28 2eqr_A N-COR1, N-COR, nuclear 93.9 0.093 3.2E-06 43.5 5.7 44 553-598 11-54 (61)
29 2crg_A Metastasis associated p 93.8 0.07 2.4E-06 45.7 5.1 44 554-598 8-51 (70)
30 3sjm_A Telomeric repeat-bindin 93.6 0.054 1.9E-06 45.5 3.9 49 203-253 10-61 (64)
31 2d9a_A B-MYB, MYB-related prot 93.5 0.061 2.1E-06 44.0 4.0 48 204-253 8-56 (60)
32 1guu_A C-MYB, MYB proto-oncoge 93.4 0.07 2.4E-06 42.3 4.1 46 204-251 3-49 (52)
33 2din_A Cell division cycle 5-l 93.4 0.054 1.8E-06 45.2 3.5 47 204-253 9-55 (66)
34 2elk_A SPCC24B10.08C protein; 93.2 0.062 2.1E-06 44.1 3.6 45 204-250 9-55 (58)
35 1ug2_A 2610100B20RIK gene prod 92.8 0.06 2.1E-06 48.8 3.1 45 207-251 36-81 (95)
36 2cu7_A KIAA1915 protein; nucle 92.7 0.076 2.6E-06 45.1 3.5 47 204-253 9-56 (72)
37 1w0t_A Telomeric repeat bindin 92.5 0.1 3.5E-06 41.7 3.8 47 204-252 2-51 (53)
38 2cqq_A RSGI RUH-037, DNAJ homo 91.7 0.12 4.1E-06 44.6 3.5 49 205-253 9-58 (72)
39 2iw5_B Protein corest, REST co 91.7 0.19 6.5E-06 52.2 5.6 44 554-599 133-176 (235)
40 2cjj_A Radialis; plant develop 91.2 0.15 5E-06 46.2 3.8 50 204-253 8-59 (93)
41 1gvd_A MYB proto-oncogene prot 91.1 0.16 5.5E-06 40.3 3.5 46 204-251 3-49 (52)
42 1gv2_A C-MYB, MYB proto-oncoge 90.1 0.22 7.5E-06 44.7 4.0 47 204-253 56-103 (105)
43 4a69_C Nuclear receptor corepr 89.8 0.35 1.2E-05 43.6 5.0 44 553-598 42-85 (94)
44 2k9n_A MYB24; R2R3 domain, DNA 89.7 0.28 9.7E-06 44.4 4.3 47 204-253 53-100 (107)
45 2yus_A SWI/SNF-related matrix- 89.6 0.12 4E-06 45.3 1.6 46 203-251 17-63 (79)
46 3osg_A MYB21; transcription-DN 89.5 0.25 8.4E-06 46.1 3.9 47 204-253 62-109 (126)
47 2dim_A Cell division cycle 5-l 89.1 0.3 1E-05 41.1 3.7 46 204-251 9-55 (70)
48 1ity_A TRF1; helix-turn-helix, 88.9 0.47 1.6E-05 39.8 4.8 49 203-253 9-60 (69)
49 1h8a_C AMV V-MYB, MYB transfor 87.3 0.38 1.3E-05 44.7 3.6 47 204-253 79-126 (128)
50 2k9n_A MYB24; R2R3 domain, DNA 85.6 0.54 1.9E-05 42.5 3.5 46 204-251 1-47 (107)
51 1gv2_A C-MYB, MYB proto-oncoge 85.6 0.5 1.7E-05 42.3 3.3 46 204-251 4-50 (105)
52 2ltp_A Nuclear receptor corepr 85.4 0.17 5.8E-06 44.9 0.0 47 204-253 16-63 (89)
53 2xag_B REST corepressor 1; ami 82.9 1.2 4.1E-05 50.7 5.5 44 554-599 380-423 (482)
54 3osg_A MYB21; transcription-DN 82.0 0.87 3E-05 42.4 3.4 46 203-251 10-56 (126)
55 3zqc_A MYB3; transcription-DNA 81.7 0.99 3.4E-05 42.2 3.7 47 204-253 54-101 (131)
56 2cu7_A KIAA1915 protein; nucle 81.4 2.6 8.8E-05 35.7 5.8 43 553-597 8-50 (72)
57 1h8a_C AMV V-MYB, MYB transfor 81.2 1 3.6E-05 41.7 3.7 47 203-251 26-73 (128)
58 1h89_C C-MYB, MYB proto-oncoge 81.0 0.96 3.3E-05 43.4 3.4 47 204-253 110-157 (159)
59 2yus_A SWI/SNF-related matrix- 80.5 2.4 8.2E-05 37.0 5.5 45 553-599 17-61 (79)
60 2yum_A ZZZ3 protein, zinc fing 79.1 2.3 7.8E-05 36.1 4.8 43 553-597 7-55 (75)
61 1x41_A Transcriptional adaptor 77.2 4.6 0.00016 33.0 5.9 43 553-597 7-50 (60)
62 1x58_A Hypothetical protein 49 77.0 2 6.8E-05 36.4 3.7 49 204-254 8-59 (62)
63 1ign_A Protein (RAP1); RAP1,ye 75.7 1.3 4.6E-05 46.3 2.8 48 204-251 8-59 (246)
64 2elk_A SPCC24B10.08C protein; 75.2 4.8 0.00016 32.8 5.5 40 554-595 9-50 (58)
65 1wgx_A KIAA1903 protein; MYB D 74.5 2 6.9E-05 37.4 3.2 46 206-251 10-57 (73)
66 3zqc_A MYB3; transcription-DNA 71.2 1.3 4.3E-05 41.5 1.2 46 204-251 2-48 (131)
67 3h6l_A Histone-lysine N-methyl 70.7 2 6.7E-05 45.5 2.7 29 684-712 82-110 (278)
68 1guu_A C-MYB, MYB proto-oncoge 70.4 6.9 0.00024 30.7 5.2 40 554-595 3-43 (52)
69 1h89_C C-MYB, MYB proto-oncoge 70.2 2.7 9.4E-05 40.2 3.4 46 204-251 58-104 (159)
70 2eqr_A N-COR1, N-COR, nuclear 69.2 3.4 0.00011 34.1 3.2 48 203-253 11-59 (61)
71 2d9a_A B-MYB, MYB-related prot 67.1 9.8 0.00033 30.8 5.6 43 553-597 7-50 (60)
72 2din_A Cell division cycle 5-l 66.3 9.7 0.00033 31.4 5.5 38 554-594 9-46 (66)
73 2lua_A Protein MALE-specific l 65.9 3.1 0.0001 34.2 2.2 26 713-738 5-37 (52)
74 2ltp_A Nuclear receptor corepr 69.4 1.3 4.3E-05 39.4 0.0 42 553-596 15-56 (89)
75 2llk_A Cyclin-D-binding MYB-li 64.7 5.5 0.00019 34.4 3.8 43 554-597 23-66 (73)
76 2l9z_A PR domain zinc finger p 64.5 2.1 7.3E-05 33.2 1.0 25 281-308 6-33 (39)
77 3ope_A Probable histone-lysine 63.8 5.3 0.00018 40.5 4.1 29 684-712 37-66 (222)
78 2cqr_A RSGI RUH-043, DNAJ homo 61.9 6.4 0.00022 34.0 3.7 45 552-598 16-64 (73)
79 1w0t_A Telomeric repeat bindin 61.8 9.7 0.00033 30.1 4.5 43 555-597 3-49 (53)
80 1gvd_A MYB proto-oncogene prot 61.7 12 0.0004 29.5 4.9 41 554-596 3-44 (52)
81 2dim_A Cell division cycle 5-l 58.5 17 0.00058 30.3 5.7 42 553-596 8-50 (70)
82 2ckx_A NGTRF1, telomere bindin 56.0 8.1 0.00028 34.1 3.4 46 206-253 2-52 (83)
83 2aje_A Telomere repeat-binding 55.6 17 0.00057 33.6 5.5 49 203-253 12-65 (105)
84 1ity_A TRF1; helix-turn-helix, 52.3 22 0.00074 29.6 5.3 45 553-597 9-57 (69)
85 1mvh_A Cryptic LOCI regulator 52.2 8.4 0.00029 40.9 3.4 22 786-807 240-262 (299)
86 2cjj_A Radialis; plant develop 52.1 18 0.0006 32.6 5.0 45 553-599 7-55 (93)
87 2roh_A RTBP1, telomere binding 51.1 10 0.00035 35.9 3.4 50 204-253 31-83 (122)
88 3sjm_A Telomeric repeat-bindin 51.1 24 0.00084 29.3 5.4 45 554-598 11-59 (64)
89 2y9y_A Imitation switch protei 46.8 14 0.00047 41.0 4.1 48 204-251 228-289 (374)
90 3hna_A Histone-lysine N-methyl 46.5 8.4 0.00029 40.7 2.3 21 787-807 244-264 (287)
91 3hm5_A DNA methyltransferase 1 46.3 20 0.00068 32.5 4.4 44 205-251 31-80 (93)
92 2juh_A Telomere binding protei 46.3 11 0.00037 35.6 2.8 49 203-253 16-69 (121)
93 1wgx_A KIAA1903 protein; MYB D 44.1 36 0.0012 29.6 5.5 46 552-599 6-55 (73)
94 2xag_B REST corepressor 1; ami 43.7 4.9 0.00017 45.8 0.0 43 554-598 189-231 (482)
95 4a69_C Nuclear receptor corepr 43.3 30 0.001 31.0 5.1 69 176-251 19-88 (94)
96 2cqq_A RSGI RUH-037, DNAJ homo 42.1 37 0.0013 29.1 5.3 44 554-600 8-55 (72)
97 3qww_A SET and MYND domain-con 39.0 19 0.00066 39.7 3.8 31 775-805 6-36 (433)
98 3n71_A Histone lysine methyltr 38.9 20 0.0007 40.2 4.0 33 774-806 5-37 (490)
99 1ofc_X ISWI protein; nuclear p 37.5 25 0.00086 37.9 4.3 48 204-251 212-273 (304)
100 3bo5_A Histone-lysine N-methyl 36.2 30 0.001 36.6 4.5 21 675-695 58-80 (290)
101 4mt2_A Metallothionein isoform 35.5 76 0.0026 26.8 5.9 44 673-720 8-54 (62)
102 3qwp_A SET and MYND domain-con 35.0 27 0.00091 38.4 4.1 30 775-804 4-33 (429)
103 1rju_V Metallothionein; Cu(I)- 30.9 36 0.0012 25.3 2.9 10 696-705 14-23 (36)
104 2iw5_B Protein corest, REST co 29.0 41 0.0014 35.1 4.0 45 205-252 134-179 (235)
105 1x58_A Hypothetical protein 49 27.4 50 0.0017 28.0 3.5 29 553-581 7-35 (62)
106 2xus_A Breast cancer metastasi 27.1 60 0.0021 26.4 3.8 29 33-61 15-44 (49)
107 3smt_A Histone-lysine N-methyl 27.1 38 0.0013 38.4 3.7 39 777-815 94-133 (497)
108 1fex_A TRF2-interacting telome 26.3 60 0.0021 26.7 3.8 46 204-249 2-55 (59)
109 1ml9_A Histone H3 methyltransf 26.1 29 0.00098 36.7 2.3 19 787-805 248-267 (302)
110 3ooi_A Histone-lysine N-methyl 23.2 34 0.0012 34.8 2.2 18 786-803 188-205 (232)
111 3qxy_A N-lysine methyltransfer 21.6 51 0.0017 36.6 3.3 33 776-808 38-71 (449)
No 1
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=99.91 E-value=9.5e-25 Score=231.07 Aligned_cols=147 Identities=20% Similarity=0.429 Sum_probs=124.2
Q ss_pred CCCCCCCCCCCCCCCCCCcccCCCcccccCCCCCccccccCCCcccCCCCccCCCCccccccCccCCCCCcC--------
Q 003112 672 PCRQYNPCGCQTACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRN-------- 743 (846)
Q Consensus 672 ~~~~y~PC~h~gpC~~~C~C~~~g~~CEk~C~C~~~C~nRF~GC~C~~~qC~t~~CpC~~a~rECDPdlC~~-------- 743 (846)
+.+.|+|..+.++.. .. + ...++|+||.|..+.|.+..|+|+..+++|+++.|..
T Consensus 36 ~~f~Y~~~~~~~~~~---~~-------------~-~~~~~~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~~~~~~ 98 (290)
T 3bo5_A 36 APFQYTPDHVVGPGA---DI-------------D-PTQITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKY 98 (290)
T ss_dssp CCCEECSSCEECTTC---SS-------------C-TTSCCCCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC-----CC
T ss_pred CCcEEeeceecCCCC---cC-------------C-cccccCCCCCCCCCCcCCCCCcchhhcCccCcccccccccccccc
Confidence 568899988765442 11 1 1356799999987899999999999999999988853
Q ss_pred ------CcccCCCCCCCCCCCCCCcccccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHH
Q 003112 744 ------CWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADK 817 (846)
Q Consensus 744 ------C~~sCgd~~~~~P~~~~~~~~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdR 817 (846)
|+..|++ +..|+||++|+|...+|+|+++..+||||||.++|++|+||+||+||||+.+|+++
T Consensus 99 ~~~~~EC~~~C~C-----------~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~ 167 (290)
T 3bo5_A 99 AEPVFECNVLCRC-----------SDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQR 167 (290)
T ss_dssp CCCEECCCTTCCS-----------CTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHH
T ss_pred CCceEeCCCCCCC-----------CCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHH
Confidence 3333433 24999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccCCCeEEEEcCC--------ccEEccccCCC
Q 003112 818 RGKIYDRENSSFLFNLND--------QATYIAHLYFD 846 (846)
Q Consensus 818 Rgk~Yd~~~~sYLF~Ln~--------~~VIDATrKGN 846 (846)
|...|+....+|+|.|++ .++|||+++||
T Consensus 168 R~~~~~~~~~~Y~~~l~~~~~~~~~~~~~IDa~~~GN 204 (290)
T 3bo5_A 168 RIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGN 204 (290)
T ss_dssp HHTTCCSSCCCCCEEEEECC-----EEEEEEEEEEEC
T ss_pred HHHhhcccCCcceeeecccccCCccceeEEeeeecCC
Confidence 999888778899999853 37999999998
No 2
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=99.86 E-value=5.3e-22 Score=210.88 Aligned_cols=83 Identities=29% Similarity=0.430 Sum_probs=80.0
Q ss_pred cccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcCC-----ccE
Q 003112 764 ECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLND-----QAT 838 (846)
Q Consensus 764 ~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln~-----~~V 838 (846)
.|+||++|+|...+|+|+++..+||||||.++|++|+||+||+||||+.+||++|...|+..+.+|+|.|+. .++
T Consensus 125 ~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~~~ 204 (299)
T 1mvh_A 125 ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYT 204 (299)
T ss_dssp TCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCEE
T ss_pred CcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccCceEEEEecCCCCCccEE
Confidence 899999999999999999999999999999999999999999999999999999999999888999999974 689
Q ss_pred EccccCCC
Q 003112 839 YIAHLYFD 846 (846)
Q Consensus 839 IDATrKGN 846 (846)
|||+++||
T Consensus 205 IDa~~~GN 212 (299)
T 1mvh_A 205 VDAQNYGD 212 (299)
T ss_dssp EECSSEEC
T ss_pred EeCcccCC
Confidence 99999998
No 3
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=99.84 E-value=1.8e-21 Score=199.92 Aligned_cols=102 Identities=26% Similarity=0.396 Sum_probs=91.1
Q ss_pred CccccccCccCCCCCcCCcccCCCCCCCCCCCCCCcccccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeee
Q 003112 727 CPCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYT 806 (846)
Q Consensus 727 CpC~~a~rECDPdlC~~C~~sCgd~~~~~P~~~~~~~~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYv 806 (846)
|+|+.+..||+|..|. |+ ..|+|+++|++...+++|+++..+||||||.++|++|+||+||+
T Consensus 61 C~nr~~~~EC~~~~C~-c~-----------------~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~ 122 (232)
T 3ooi_A 61 CINRMLLYECHPTVCP-AG-----------------GRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYV 122 (232)
T ss_dssp CHHHHTTBCCCTTTCT-TG-----------------GGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECC
T ss_pred CcCcCceeEeCCCCCC-CC-----------------CCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEee
Confidence 4444578999988886 53 28999999999999999999999999999999999999999999
Q ss_pred eeeeCHHHHHHHhhhcccC--CCeEEEEcCCccEEccccCCC
Q 003112 807 GELISHREADKRGKIYDRE--NSSFLFNLNDQATYIAHLYFD 846 (846)
Q Consensus 807 GEVIS~eEAdRRgk~Yd~~--~~sYLF~Ln~~~VIDATrKGN 846 (846)
||||+.+|+++|...|... ...|+|.|+.+++|||+++||
T Consensus 123 Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn 164 (232)
T 3ooi_A 123 GELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGN 164 (232)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEEC
T ss_pred eeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEecccccc
Confidence 9999999999998766544 468999999999999999997
No 4
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.84 E-value=4.3e-21 Score=195.54 Aligned_cols=103 Identities=22% Similarity=0.405 Sum_probs=92.1
Q ss_pred CCccccccCccCCCCCcCCcccCCCCCCCCCCCCCCcccccchHHhhcccc-eEEEEEecccCceeeeccccCCCceeEe
Q 003112 726 QCPCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQ-RVLLGRSDVSGWGAFLKNSVGKHEYLGE 804 (846)
Q Consensus 726 ~CpC~~a~rECDPdlC~~C~~sCgd~~~~~P~~~~~~~~C~Nr~lQrg~~k-kL~V~kS~ikGwGLFA~EdIkKGeFI~E 804 (846)
.|+|++...||+|+.|. |+ ..|.|+++|++..+ .|+|+++..+||||||.++|++|+||+|
T Consensus 41 ~C~nr~~~~EC~~~~C~-C~-----------------~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~e 102 (222)
T 3ope_A 41 DCLNRMIFAECSPNTCP-CG-----------------EQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIE 102 (222)
T ss_dssp CCTTGGGTBCCCTTTCT-TT-----------------TSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEE
T ss_pred cCcCcCeEeEeCCCCCc-CC-----------------CCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEE
Confidence 57778889999998897 63 28999999999765 5999999999999999999999999999
Q ss_pred eeeeeeCHHHHHHHh-hhcccCCCeEEEEcCCccEEccccCCC
Q 003112 805 YTGELISHREADKRG-KIYDRENSSFLFNLNDQATYIAHLYFD 846 (846)
Q Consensus 805 YvGEVIS~eEAdRRg-k~Yd~~~~sYLF~Ln~~~VIDATrKGN 846 (846)
|+||||+.+|+++|. ..|.....+|+|.|+.+++|||+++||
T Consensus 103 y~Gevi~~~e~~~r~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn 145 (222)
T 3ope_A 103 YLGEVVSEQEFRNRMIEQYHNHSDHYCLNLDSGMVIDSYRMGN 145 (222)
T ss_dssp CCSEEECHHHHHHHHHHTSTTCCSCCEEEEETTEEEECSSEEC
T ss_pred ecceecCHHHHHHHHHHHhcccCCeEEEecCCCEEEeCccccc
Confidence 999999999999886 455556679999999999999999997
No 5
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=99.83 E-value=4.3e-21 Score=202.97 Aligned_cols=118 Identities=31% Similarity=0.573 Sum_probs=95.8
Q ss_pred cCCCcccCCCCccCCCCccccccCcc---------------CCCCCcCCcccCCCCCCCCCCCCCCcccccchHHhhccc
Q 003112 711 RFRGCHCAKSQCRSRQCPCFAADREC---------------DPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQ 775 (846)
Q Consensus 711 RF~GC~C~~~qC~t~~CpC~~a~rEC---------------DPdlC~~C~~sCgd~~~~~P~~~~~~~~C~Nr~lQrg~~ 775 (846)
.+.||.|. +.|.+..|+|..+..+| .|.+-.+|+..|+++ ..|+||++|+|..
T Consensus 79 ~~~gC~C~-~~C~~~~C~C~~~~~~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~-----------~~C~Nr~~q~g~~ 146 (287)
T 3hna_A 79 HLQYCVCI-DDCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCW-----------RNCRNRVVQNGLR 146 (287)
T ss_dssp GCCCCCCS-SSSCSTTCHHHHHTSSCCBCTTSCBCTTCCSSSCCCEECCCTTSSSC-----------TTCSSCSGGGCCC
T ss_pred CCCCCcCc-CCCCCCCCcCcccCcccccCCCCcccccccccCCceEEecCCCCCCC-----------CCCCCcccCcCCc
Confidence 46778884 66777778887543322 233344565555553 3899999999999
Q ss_pred ceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcCCc----cEEccccCCC
Q 003112 776 QRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQ----ATYIAHLYFD 846 (846)
Q Consensus 776 kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln~~----~VIDATrKGN 846 (846)
.+|+|+++..+||||||.++|++|+||+||+||||+.+|+++|. ..+|+|.|+.. ++|||+++||
T Consensus 147 ~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~------~~~Y~f~l~~~~~~~~~IDa~~~GN 215 (287)
T 3hna_A 147 ARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVRE------EDSYLFDLDNKDGEVYCIDARFYGN 215 (287)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCS------CCTTEEESCCSSSSCEEEEEEEEEC
T ss_pred ccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhc------ccceEEEeccCCCceEEEeccccCC
Confidence 99999999999999999999999999999999999999998874 46899999754 6999999998
No 6
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=99.83 E-value=6.3e-21 Score=202.47 Aligned_cols=83 Identities=20% Similarity=0.374 Sum_probs=77.2
Q ss_pred cccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhccc--CCCeEEEEcCC------
Q 003112 764 ECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDR--ENSSFLFNLND------ 835 (846)
Q Consensus 764 ~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~--~~~sYLF~Ln~------ 835 (846)
.|+||++|+|...+|+|+++..+||||||.++|++|+||+||+||||+.+||++|...|.. .+.+|+|.|+.
T Consensus 121 ~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~~ 200 (302)
T 1ml9_A 121 DCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPDS 200 (302)
T ss_dssp TCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSS
T ss_pred CCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEeccccCccc
Confidence 8999999999999999999999999999999999999999999999999999999987743 35689999974
Q ss_pred --------ccEEccccCCC
Q 003112 836 --------QATYIAHLYFD 846 (846)
Q Consensus 836 --------~~VIDATrKGN 846 (846)
.++|||+++||
T Consensus 201 ~d~~~~~~~~~IDa~~~GN 219 (302)
T 1ml9_A 201 LDPLLAGQPLEVDGEYMSG 219 (302)
T ss_dssp SCHHHHSCCCEEECSSEEC
T ss_pred ccccccCCcEEEeCcccCC
Confidence 68999999998
No 7
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=99.82 E-value=9.8e-21 Score=199.63 Aligned_cols=102 Identities=24% Similarity=0.359 Sum_probs=92.5
Q ss_pred CCccccccCccCCCCCcCCcccCCCCCCCCCCCCCCcccccchHHhhcccceEEEEEecccCceeeeccccCCCceeEee
Q 003112 726 QCPCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEY 805 (846)
Q Consensus 726 ~CpC~~a~rECDPdlC~~C~~sCgd~~~~~P~~~~~~~~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EY 805 (846)
.|+|+++..||.+ .|. |+ ..|+||++|++..++|+|+++..+||||||.++|++|+||+||
T Consensus 86 ~C~nr~~~~EC~~-~C~-C~-----------------~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY 146 (278)
T 3h6l_A 86 DCLNRLLMIECSS-RCP-NG-----------------DYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEY 146 (278)
T ss_dssp TCTTGGGTBCCCT-TCT-TG-----------------GGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEEC
T ss_pred CCCCcceEeccCC-CCC-cC-----------------CCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEe
Confidence 4788889999985 675 53 3899999999999999999999999999999999999999999
Q ss_pred eeeeeCHHHHHHHhhhcccC--CCeEEEEcCCccEEccccCCC
Q 003112 806 TGELISHREADKRGKIYDRE--NSSFLFNLNDQATYIAHLYFD 846 (846)
Q Consensus 806 vGEVIS~eEAdRRgk~Yd~~--~~sYLF~Ln~~~VIDATrKGN 846 (846)
+||||+.+|+++|...|... .+.|+|.|+++++|||+++||
T Consensus 147 ~Gevi~~~e~~~R~~~y~~~~~~~~y~~~l~~~~~IDa~~~GN 189 (278)
T 3h6l_A 147 CGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKGN 189 (278)
T ss_dssp CCEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEECSSEEC
T ss_pred eeeecCHHHHHHHHHHHHhccCccceeecccCCeEEeCcccCC
Confidence 99999999999999988754 457888999999999999997
No 8
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=99.79 E-value=6.3e-20 Score=195.24 Aligned_cols=83 Identities=30% Similarity=0.550 Sum_probs=78.6
Q ss_pred cccchHHhhcccceEEEEEec-ccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcC---CccEE
Q 003112 764 ECRNMKLLLKQQQRVLLGRSD-VSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLN---DQATY 839 (846)
Q Consensus 764 ~C~Nr~lQrg~~kkL~V~kS~-ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln---~~~VI 839 (846)
.|+||++|+|...+|.|+++. .+||||||.++|++|+||+||+||||+.+||++|...|+..+.+|+|.|+ +.++|
T Consensus 128 ~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~I 207 (300)
T 2r3a_A 128 DCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDYESDEFTV 207 (300)
T ss_dssp TCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTEEECCSSCSSEEE
T ss_pred cCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEEEEeecCCceEEE
Confidence 899999999999999999976 69999999999999999999999999999999999999887889999997 57899
Q ss_pred ccccCCC
Q 003112 840 IAHLYFD 846 (846)
Q Consensus 840 DATrKGN 846 (846)
||+++||
T Consensus 208 Da~~~GN 214 (300)
T 2r3a_A 208 DAARYGN 214 (300)
T ss_dssp ECSSEEC
T ss_pred ecccccC
Confidence 9999998
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.60 E-value=2.1e-16 Score=158.74 Aligned_cols=84 Identities=27% Similarity=0.411 Sum_probs=78.8
Q ss_pred ccccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCC-CeEEEEcCCccEEcc
Q 003112 763 YECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDREN-SSFLFNLNDQATYIA 841 (846)
Q Consensus 763 ~~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~-~sYLF~Ln~~~VIDA 841 (846)
..|+++++|++....|.|++|.++||||||.++|++|+||+||+||||+..++++|...|+..+ .+|+|.|++.++|||
T Consensus 39 ~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l~~~~~IDa 118 (192)
T 2w5y_A 39 MPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDA 118 (192)
T ss_dssp HHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEECSSSEEEEC
T ss_pred cchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeeecCceEEEC
Confidence 3788999999999999999999999999999999999999999999999999999998887654 589999999999999
Q ss_pred ccCCC
Q 003112 842 HLYFD 846 (846)
Q Consensus 842 TrKGN 846 (846)
++.||
T Consensus 119 ~~~Gn 123 (192)
T 2w5y_A 119 TMHGN 123 (192)
T ss_dssp TTTCC
T ss_pred ccccC
Confidence 99998
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.51 E-value=1.2e-14 Score=140.32 Aligned_cols=84 Identities=17% Similarity=0.285 Sum_probs=74.7
Q ss_pred ccccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccC--CCeEEEE---cCCcc
Q 003112 763 YECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRE--NSSFLFN---LNDQA 837 (846)
Q Consensus 763 ~~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~--~~sYLF~---Ln~~~ 837 (846)
....++.+|+|...++.|+++..+||||||.++|++|+||+||+||||+..|+++|...|+.. ...|+|. +++.+
T Consensus 17 ~~~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~ 96 (166)
T 3f9x_A 17 RKRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTY 96 (166)
T ss_dssp HHHHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEEE
T ss_pred HHHHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCCe
Confidence 356789999999999999999999999999999999999999999999999999999988764 3345544 67899
Q ss_pred EEccccC-CC
Q 003112 838 TYIAHLY-FD 846 (846)
Q Consensus 838 VIDATrK-GN 846 (846)
+|||+++ ||
T Consensus 97 ~iDa~~~~Gn 106 (166)
T 3f9x_A 97 CVDATRETNR 106 (166)
T ss_dssp EEECCSCCSC
T ss_pred EEechhcCCC
Confidence 9999997 87
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.30 E-value=1.6e-12 Score=136.06 Aligned_cols=65 Identities=28% Similarity=0.393 Sum_probs=59.6
Q ss_pred cceEEEEEeccc--CceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcCCccEEcccc
Q 003112 775 QQRVLLGRSDVS--GWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQATYIAHL 843 (846)
Q Consensus 775 ~kkL~V~kS~ik--GwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln~~~VIDATr 843 (846)
...+.|++|.++ ||||||.++|++|+||+||+||||+.+|+++|...|+ .|+|.|++.++|||+.
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~----~~~f~l~~~~~IDa~~ 174 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPE 174 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGC----SSCEECSSSCEEECCT
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhc----cceeeecCCeEEEccc
Confidence 467999999987 9999999999999999999999999999999988774 5679999999999965
No 12
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.12 E-value=4.9e-11 Score=125.34 Aligned_cols=65 Identities=26% Similarity=0.361 Sum_probs=58.8
Q ss_pred cceEEEEEecccC--ceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcCCccEEcccc
Q 003112 775 QQRVLLGRSDVSG--WGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQATYIAHL 843 (846)
Q Consensus 775 ~kkL~V~kS~ikG--wGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln~~~VIDATr 843 (846)
.+.+.|++|.++| |||||.++|++|+||+||+||||+.+|+++|...|+ .|+|.|++.++|||+.
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~----~~~~~l~~~~~iDa~~ 228 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPE 228 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGC----TTEEECSSSCEEECCT
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcc----cCEEecCCCEEEeCcc
Confidence 4689999999977 999999999999999999999999999999987773 5689999999999933
No 13
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.11 E-value=2.2e-11 Score=117.93 Aligned_cols=73 Identities=16% Similarity=0.168 Sum_probs=60.8
Q ss_pred cccchHHhhcccceEEEEEecc--cCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcC---C-cc
Q 003112 764 ECRNMKLLLKQQQRVLLGRSDV--SGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLN---D-QA 837 (846)
Q Consensus 764 ~C~Nr~lQrg~~kkL~V~kS~i--kGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln---~-~~ 837 (846)
.+.|+ .+++....|.|++|.+ +||||||.++|++|+||+||+||+|+.+|++ ...|||.|. . .+
T Consensus 18 ~~~~~-~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~---------~~~Y~f~i~~~~~~~~ 87 (149)
T 2qpw_A 18 EVPEH-VLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK---------NNVYMWEVYYPNLGWM 87 (149)
T ss_dssp GSCHH-HHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC---------CSSSEEEEEETTTEEE
T ss_pred hhhHH-HHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc---------cCceEEEEecCCCeeE
Confidence 56666 4566789999999986 5999999999999999999999999987652 467999983 3 36
Q ss_pred EEcccc--CCC
Q 003112 838 TYIAHL--YFD 846 (846)
Q Consensus 838 VIDATr--KGN 846 (846)
+|||+. +||
T Consensus 88 ~IDa~~~~~gn 98 (149)
T 2qpw_A 88 CIDATDPEKGN 98 (149)
T ss_dssp EEECSSGGGSC
T ss_pred EEeCCCCCCCc
Confidence 899998 887
No 14
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.00 E-value=1.6e-10 Score=106.67 Aligned_cols=61 Identities=20% Similarity=0.390 Sum_probs=53.1
Q ss_pred cceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcCCccEEccccCCC
Q 003112 775 QQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQATYIAHLYFD 846 (846)
Q Consensus 775 ~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln~~~VIDATrKGN 846 (846)
.+++.|++|.++||||||.++|++|+||+||+|++|+.+|++.+ ...|+|.+++ ||+..||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~-------~~~y~f~~~~----d~~~~~~ 63 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTA-------LEDYLFSRKN----MSAMALG 63 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHH-------SCSEEEEETT----EEEEESS
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhc-------cCCeEEEeCC----ccccccC
Confidence 46899999999999999999999999999999999999999762 3569999876 6666554
No 15
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=98.69 E-value=1e-08 Score=101.59 Aligned_cols=68 Identities=21% Similarity=0.316 Sum_probs=47.5
Q ss_pred cccceEEEEEeccc--CceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcC--Cc---cEEcccc--
Q 003112 773 KQQQRVLLGRSDVS--GWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLN--DQ---ATYIAHL-- 843 (846)
Q Consensus 773 g~~kkL~V~kS~ik--GwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln--~~---~VIDATr-- 843 (846)
.....|.|++|.+. ||||||.++|++|++|++|+||+|+.+|++.. .+..|+|.+. ++ ++|||+.
T Consensus 24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~------~~~~y~w~i~~~~G~~~~~IDa~~e~ 97 (170)
T 3ep0_A 24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC------KNNNLMWEVFNEDGTVRYFIDASQED 97 (170)
T ss_dssp SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC----------------CEEEEECTTSSEEEEEECC---
T ss_pred CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc------cCCceEEEEecCCCcEEEEEECCCCC
Confidence 35678999999885 89999999999999999999999999998642 2467888873 23 7999997
Q ss_pred CCC
Q 003112 844 YFD 846 (846)
Q Consensus 844 KGN 846 (846)
.||
T Consensus 98 ~~N 100 (170)
T 3ep0_A 98 HRS 100 (170)
T ss_dssp ---
T ss_pred Ccc
Confidence 676
No 16
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=98.43 E-value=5.3e-08 Score=98.53 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=57.2
Q ss_pred ccchHHhhcccceEEEEEecc--cCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcC--C--ccE
Q 003112 765 CRNMKLLLKQQQRVLLGRSDV--SGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLN--D--QAT 838 (846)
Q Consensus 765 C~Nr~lQrg~~kkL~V~kS~i--kGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln--~--~~V 838 (846)
-.||.. .-....|.|..|.+ +|+||||.++|+||+++++|+||+|+.+++.++ .+..|+|.+. . .++
T Consensus 48 ~~~RA~-~SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~------~~~~y~w~i~~~g~~~~~ 120 (196)
T 3dal_A 48 TSVQAE-ASLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKN------ANRKYFWRIYSRGELHHF 120 (196)
T ss_dssp --CHHH-HTCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC---------CCTTEEEEEETTEEEEE
T ss_pred CCChHH-hcCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhc------cCCcceeeeccCCCEEEE
Confidence 334443 44567889999988 899999999999999999999999998876422 2457888873 2 379
Q ss_pred Ecccc--CCC
Q 003112 839 YIAHL--YFD 846 (846)
Q Consensus 839 IDATr--KGN 846 (846)
|||+. .||
T Consensus 121 IDas~e~~gN 130 (196)
T 3dal_A 121 IDGFNEEKSN 130 (196)
T ss_dssp EECCCTTSSC
T ss_pred EECCCCCCCc
Confidence 99987 777
No 17
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=98.40 E-value=1.9e-07 Score=90.37 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=49.1
Q ss_pred cchHHhhcccceEEEEEecc-cCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEc--CC--ccEEc
Q 003112 766 RNMKLLLKQQQRVLLGRSDV-SGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNL--ND--QATYI 840 (846)
Q Consensus 766 ~Nr~lQrg~~kkL~V~kS~i-kGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~L--n~--~~VID 840 (846)
.||.. .-....|.|..|.. +|+||||.++|++|+++++|+||+++.+|+.+|. + .+..|+|.+ ++ .++||
T Consensus 14 ~~ra~-~slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~---~-~~~~y~w~i~~~~~~~~~iD 88 (151)
T 3db5_A 14 ESRAR-LSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT---D-KAVNHIWKIYHNGVLEFCII 88 (151)
T ss_dssp CCHHH-HTCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC---------------CCSEEEEEETTEEEEEEE
T ss_pred CChHH-hcCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc---c-cCCCceEEEEeCCCEEEEEE
Confidence 34443 44567788888743 8999999999999999999999999999998773 1 234577765 22 36899
Q ss_pred ccc--CCC
Q 003112 841 AHL--YFD 846 (846)
Q Consensus 841 ATr--KGN 846 (846)
|+. +||
T Consensus 89 ~~~~~~~N 96 (151)
T 3db5_A 89 TTDENECN 96 (151)
T ss_dssp CCCTTTSC
T ss_pred CcCCCCCc
Confidence 997 476
No 18
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=98.20 E-value=2.9e-07 Score=97.35 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=32.3
Q ss_pred ecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHh
Q 003112 783 SDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRG 819 (846)
Q Consensus 783 S~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRg 819 (846)
+..+||||||.++|++|+||+||+||||...+++++.
T Consensus 143 ~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~ 179 (273)
T 3s8p_A 143 SEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM 179 (273)
T ss_dssp TCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHH
T ss_pred ecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHH
Confidence 3459999999999999999999999999877776653
No 19
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=97.65 E-value=7.9e-06 Score=85.31 Aligned_cols=36 Identities=25% Similarity=0.205 Sum_probs=31.1
Q ss_pred cccCceeeeccccCCCceeEeeeeeeeCHHHHHHHh
Q 003112 784 DVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRG 819 (846)
Q Consensus 784 ~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRg 819 (846)
..+||||||.++|++|+||+||+|+|+...+++.+.
T Consensus 116 ~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~ 151 (247)
T 3rq4_A 116 ETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGL 151 (247)
T ss_dssp CSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGG
T ss_pred cCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHh
Confidence 358999999999999999999999999766666543
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=97.64 E-value=5.5e-05 Score=78.68 Aligned_cols=65 Identities=11% Similarity=0.115 Sum_probs=49.0
Q ss_pred hcccceEEEEEecccCceeeec-cccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEc--CC--ccEEcccc--C
Q 003112 772 LKQQQRVLLGRSDVSGWGAFLK-NSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNL--ND--QATYIAHL--Y 844 (846)
Q Consensus 772 rg~~kkL~V~kS~ikGwGLFA~-EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~L--n~--~~VIDATr--K 844 (846)
.-....|.|.+|.++|+|||+. +.|++|+++++|+||+++.++++. .|+|.+ ++ .++|||+. .
T Consensus 68 lSLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~~----------~y~wei~~~~g~~~~IDgsde~~ 137 (237)
T 3ray_A 68 LTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAG----------FFSWLIVDKNNRYKSIDGSDETK 137 (237)
T ss_dssp HTCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC---------------CCEEEEECTTSCEEEEECCCTTT
T ss_pred hcCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHccc----------cceEEEEcCCCcEEEEecCCCCC
Confidence 3356678999999999999987 899999999999999999888742 255554 22 35899997 6
Q ss_pred CC
Q 003112 845 FD 846 (846)
Q Consensus 845 GN 846 (846)
||
T Consensus 138 gN 139 (237)
T 3ray_A 138 AN 139 (237)
T ss_dssp SC
T ss_pred Cc
Confidence 76
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=97.29 E-value=4.8e-05 Score=74.05 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=32.7
Q ss_pred cceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHH
Q 003112 775 QQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREA 815 (846)
Q Consensus 775 ~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEA 815 (846)
...|.|.+ .|+||||+++|++|+.+++|+||+++.+|+
T Consensus 22 P~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~ 59 (152)
T 3ihx_A 22 PLVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSEL 59 (152)
T ss_dssp CTTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTC
T ss_pred CcceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHh
Confidence 44566653 589999999999999999999999999876
No 22
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=96.16 E-value=0.0036 Score=54.29 Aligned_cols=48 Identities=19% Similarity=0.210 Sum_probs=43.0
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcCCChhHHHHHHHHhhhcc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFSRSPSEVKARYEILSKEE 254 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~~~~sei~eRy~~L~~~~ 254 (846)
|..|++.||.+|....+++|.. -..||++|++|+-+|++||..|++..
T Consensus 23 k~~wT~EED~~L~~l~~~~G~k---W~~IA~~lgRt~~q~knRw~~L~~~~ 70 (73)
T 2llk_A 23 VGKYTPEEIEKLKELRIKHGND---WATIGAALGRSASSVKDRCRLMKDTC 70 (73)
T ss_dssp CCSSCHHHHHHHHHHHHHHSSC---HHHHHHHHTSCHHHHHHHHHHCSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCC---HHHHHHHhCCCHHHHHHHHHHHHHHc
Confidence 5679999999999999999987 78888888999999999999998553
No 23
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=95.54 E-value=0.015 Score=50.49 Aligned_cols=53 Identities=15% Similarity=0.423 Sum_probs=45.1
Q ss_pred hhhhcccccchhhhhHhhhhhcCCc-HHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 201 EEEKKDFVDSEDYILRMTIKEVGLS-DATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 201 ee~k~~f~e~eD~~~~~~~~e~g~s-d~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
+-.+..|+..||.+|..+++.||.. ..=...||.+|+ +|..|+++||+.|.++
T Consensus 15 ~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~d 69 (73)
T 2cqr_A 15 RSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVSG 69 (73)
T ss_dssp TCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHSS
T ss_pred ccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHc
Confidence 4445779999999999999999853 455789999996 9999999999999855
No 24
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=94.10 E-value=0.0037 Score=53.82 Aligned_cols=45 Identities=22% Similarity=0.448 Sum_probs=42.4
Q ss_pred cccchhhhhHhhhhhcCCcHHHHHHHHhhcCCChhHHHHHHHHhh
Q 003112 207 FVDSEDYILRMTIKEVGLSDATLESLAQCFSRSPSEVKARYEILS 251 (846)
Q Consensus 207 f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~~~~sei~eRy~~L~ 251 (846)
.+..+|++|=.+.|+-|.+++.|..||+.|++++.||.+||..|.
T Consensus 17 WTReeDR~IL~~cq~~G~s~~tfa~iA~~Lnks~~QV~~RF~~Lm 61 (70)
T 2lr8_A 17 WTRNDDRVILLECQKRGPSSKTFAYLAAKLDKNPNQVSERFQQLM 61 (70)
Confidence 566699999999999999999999999999999999999999997
No 25
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.44 E-value=0.039 Score=47.11 Aligned_cols=50 Identities=12% Similarity=0.143 Sum_probs=42.4
Q ss_pred hcccccchhhhhHhhhhhcCCcH---HHHHHHHhhcC-CChhHHHHHH-HHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSD---ATLESLAQCFS-RSPSEVKARY-EILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd---~vl~~l~~~~~-~~~sei~eRy-~~L~~~ 253 (846)
|..|++.||.+|...+++||... .-...||++|+ +|..|+.+|| +.|.+.
T Consensus 8 ~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~~ 62 (75)
T 2yum_A 8 NQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIKL 62 (75)
T ss_dssp SSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGGG
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 56799999999999999999744 56788999997 9999999999 666643
No 26
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=94.18 E-value=0.04 Score=45.38 Aligned_cols=48 Identities=13% Similarity=0.279 Sum_probs=40.5
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
+..|+..||.+|-.+++.||... -..||++|+ +|+.++++||...-..
T Consensus 8 ~~~WT~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~r~~~~l~~ 56 (60)
T 1x41_A 8 DPSWTAQEEMALLEAVMDCGFGN--WQDVANQMCTKTKEECEKHYMKYFSG 56 (60)
T ss_dssp CSSSCHHHHHHHHHHHHHTCTTC--HHHHHHHHTTSCHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHCcCc--HHHHHHHhCCCCHHHHHHHHHHHccC
Confidence 56799999999999999999743 567888887 9999999999877643
No 27
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.85 E-value=0.076 Score=44.46 Aligned_cols=44 Identities=32% Similarity=0.462 Sum_probs=39.1
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
...||+.|..+|+.++..||+|.-.||+.++ ++||-.||-+|..
T Consensus 9 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 52 (63)
T 2yqk_A 9 EKCWTEDEVKRFVKGLRQYGKNFFRIRKELL-PNKETGELITFYY 52 (63)
T ss_dssp CCSCCHHHHHHHHHHHHHTCSCHHHHHHHSC-TTSCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCcHHHHHHHHh
Confidence 4689999999999999999999999999533 6899999988775
No 28
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.85 E-value=0.093 Score=43.50 Aligned_cols=44 Identities=25% Similarity=0.252 Sum_probs=38.7
Q ss_pred CCCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
....||+-|..+|..++..||++.-.||..| +.||-.||-+|..
T Consensus 11 ~~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l--~~rt~~~~v~~Yy 54 (61)
T 2eqr_A 11 FMNVWTDHEKEIFKDKFIQHPKNFGLIASYL--ERKSVPDCVLYYY 54 (61)
T ss_dssp CCCSCCHHHHHHHHHHHHHSTTCHHHHHHHC--TTSCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHH
Confidence 4578999999999999999999999999766 6799999877764
No 29
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=93.85 E-value=0.07 Score=45.65 Aligned_cols=44 Identities=23% Similarity=0.475 Sum_probs=39.5
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
...||+.|..+|+.++..||+|.-.||+.++ ++||-.||-+|..
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 51 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFNDIRQDFL-PWKSLTSIIEYYY 51 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHHHHHHTTC-SSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCCHHHHHHHHH
Confidence 6789999999999999999999999999533 7899999988876
No 30
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=93.64 E-value=0.054 Score=45.54 Aligned_cols=49 Identities=12% Similarity=0.352 Sum_probs=40.7
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHhhc---CCChhHHHHHHHHhhhc
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQCF---SRSPSEVKARYEILSKE 253 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~---~~~~sei~eRy~~L~~~ 253 (846)
.|..|++.||.+|...+++||... -..|++.+ ++|+.++++||.+|.+.
T Consensus 10 kk~~WT~eED~~L~~~V~~~G~~~--W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~ 61 (64)
T 3sjm_A 10 KKQKWTVEESEWVKAGVQKYGEGN--WAAISKNYPFVNRTAVMIKDRWRTMKRL 61 (64)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTC--HHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHccCCCc--hHHHHhhcCCCCCCHHHHHHHHHHHhcc
Confidence 467899999999999999999743 55666654 59999999999999854
No 31
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=93.49 E-value=0.061 Score=43.98 Aligned_cols=48 Identities=25% Similarity=0.375 Sum_probs=40.4
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
|..|+..||.+|..++++||... -..||++|+ ++..++++||..+-..
T Consensus 8 k~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~l~p 56 (60)
T 2d9a_A 8 KVKWTHEEDEQLRALVRQFGQQD--WKFLASHFPNRTDQQCQYRWLRVLSG 56 (60)
T ss_dssp CSCCCHHHHHHHHHHHHHTCTTC--HHHHHHHCSSSCHHHHHHHHHHTSCS
T ss_pred CCCCCHHHHHHHHHHHHHhCCCC--HHHHHHHccCCCHHHHHHHHHHHcCC
Confidence 56799999999999999999632 567888886 9999999999987643
No 32
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=93.41 E-value=0.07 Score=42.33 Aligned_cols=46 Identities=20% Similarity=0.372 Sum_probs=39.1
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~ 251 (846)
|..|+..||.+|...+++||... -..||++| ++++.++++||..+-
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDD--WKVIANYLPNRTDVQCQHRWQKVL 49 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSC--HHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCC--HHHHHHHcCCCCHHHHHHHHHHHc
Confidence 45799999999999999999732 67788888 599999999998765
No 33
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.36 E-value=0.054 Score=45.19 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=40.9
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcCCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFSRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~~~~sei~eRy~~L~~~ 253 (846)
|..|+..||.+|-...+++|. --..||++.++|+.++++||..+...
T Consensus 9 k~~WT~eED~~L~~~~~~~g~---~W~~Ia~~~gRt~~qcr~Rw~~~l~~ 55 (66)
T 2din_A 9 KTEWSREEEEKLLHLAKLMPT---QWRTIAPIIGRTAAQCLEHYEFLLDK 55 (66)
T ss_dssp CCCCCHHHHHHHHHHHHHCTT---CHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCC---CHHHHhcccCcCHHHHHHHHHHHhCh
Confidence 567999999999999999997 36778888999999999999988733
No 34
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=93.23 E-value=0.062 Score=44.07 Aligned_cols=45 Identities=18% Similarity=0.354 Sum_probs=38.9
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC--CChhHHHHHHHHh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS--RSPSEVKARYEIL 250 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~--~~~sei~eRy~~L 250 (846)
+..|+..||.+|..++++||... -..||++|+ +|+.++++||..+
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~--W~~IA~~~~~~Rt~~qcr~r~~~~ 55 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGN--WADIADYVGNARTKEECRDHYLKT 55 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTC--HHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHHCCCCCHHHHHHHHHHH
Confidence 45699999999999999999643 667888887 8999999999875
No 35
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=92.82 E-value=0.06 Score=48.80 Aligned_cols=45 Identities=22% Similarity=0.394 Sum_probs=41.5
Q ss_pred cccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 207 FVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 207 f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
.+..+|++|=...|+.|.+.+.|..||+.|+ +++.||++||..|.
T Consensus 36 WTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~Lm 81 (95)
T 1ug2_A 36 WTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELM 81 (95)
T ss_dssp SCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 4455899999999999999999999999996 99999999999998
No 36
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=92.66 E-value=0.076 Score=45.14 Aligned_cols=47 Identities=13% Similarity=0.168 Sum_probs=40.4
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|...+++||. -...||++|+ +|..+|+.||..+...
T Consensus 9 ~~~WT~eEd~~l~~~~~~~G~---~W~~Ia~~~~~Rt~~q~k~r~~~~l~~ 56 (72)
T 2cu7_A 9 SVKWTIEEKELFEQGLAKFGR---RWTKISKLIGSRTVLQVKSYARQYFKN 56 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHTCS---CHHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCc---CHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 567999999999999999998 4677888886 9999999999887633
No 37
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=92.45 E-value=0.1 Score=41.74 Aligned_cols=47 Identities=19% Similarity=0.375 Sum_probs=39.2
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC---CChhHHHHHHHHhhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS---RSPSEVKARYEILSK 252 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~---~~~sei~eRy~~L~~ 252 (846)
|.-|++.||.+|...+++||... -..|+++|+ +++.++++||.+|.+
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~~~--W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGEGN--WSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTC--HHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 46789999999999999999642 456777776 999999999999874
No 38
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=91.66 E-value=0.12 Score=44.61 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=41.8
Q ss_pred cccccchhhhhHhhhhhcCCc-HHHHHHHHhhcCCChhHHHHHHHHhhhc
Q 003112 205 KDFVDSEDYILRMTIKEVGLS-DATLESLAQCFSRSPSEVKARYEILSKE 253 (846)
Q Consensus 205 ~~f~e~eD~~~~~~~~e~g~s-d~vl~~l~~~~~~~~sei~eRy~~L~~~ 253 (846)
..++..||.+|-.++..|+.. ..=.+.||++|++|..||++||+.|.+.
T Consensus 9 ~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~lgRt~~eV~~~y~~L~~d 58 (72)
T 2cqq_A 9 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDS 58 (72)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 468889999999999998632 2447899999999999999999999865
No 39
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=91.66 E-value=0.19 Score=52.17 Aligned_cols=44 Identities=23% Similarity=0.365 Sum_probs=39.9
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHHh
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMTC 599 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~~ 599 (846)
...||.-|..+|+.++..||++...||+.| ++||-.||=.|...
T Consensus 133 s~~WTeEE~~lFleAl~kYGKDW~~IAk~V--gTKT~~QcKnfY~~ 176 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 176 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHHHHH
Confidence 467999999999999999999999999987 88999999777654
No 40
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=91.21 E-value=0.15 Score=46.17 Aligned_cols=50 Identities=22% Similarity=0.385 Sum_probs=42.1
Q ss_pred hcccccchhhhhHhhhhhcCCc-HHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLS-DATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~s-d~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
+..|+..||.+|..+++.||.. ..=.+.||.+|+ +|..||++||+.|.++
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~d 59 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 59 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999853 245788999996 9999999999999743
No 41
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=91.05 E-value=0.16 Score=40.31 Aligned_cols=46 Identities=17% Similarity=0.233 Sum_probs=38.8
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
|..|++.||.+|...+++||.. --..||++|+ ++..++++||...-
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~--~W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPK--RWSVIAKHLKGRIGKQCRERWHNHL 49 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTT--CHHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC--hHHHHHHHcCCCCHHHHHHHHHHHc
Confidence 5679999999999999999962 2677888885 99999999998764
No 42
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=90.15 E-value=0.22 Score=44.65 Aligned_cols=47 Identities=19% Similarity=0.368 Sum_probs=40.7
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|-...++||.. -..||++| ++|+.+|+.||..|.+.
T Consensus 56 ~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~~~~ 103 (105)
T 1gv2_A 56 KTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 103 (105)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSC---HHHHHTTCTTCCHHHHHHHHHHHTC-
T ss_pred ccCCCHHHHHHHHHHHHHhCCC---HHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 5679999999999999999974 77899999 59999999999988643
No 43
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=89.82 E-value=0.35 Score=43.58 Aligned_cols=44 Identities=30% Similarity=0.248 Sum_probs=39.3
Q ss_pred CCCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
....||+.|..+|..++..||+++-.||..| +.||-.|+-.|..
T Consensus 42 ~~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l--~~Kt~~~cV~~YY 85 (94)
T 4a69_C 42 VMNMWSEQEKETFREKFMQHPKNFGLIASFL--ERKTVAECVLYYY 85 (94)
T ss_dssp HTCCCCHHHHHHHHHHHHHSTTCHHHHHHTC--TTCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCHHHHHHHc--CCCCHHHHHHHHh
Confidence 3577999999999999999999999999866 7899999987765
No 44
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=89.70 E-value=0.28 Score=44.37 Aligned_cols=47 Identities=17% Similarity=0.420 Sum_probs=41.1
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|-...++||.. -..||++| ++|..+|+.||..|...
T Consensus 53 ~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~r~ 100 (107)
T 2k9n_A 53 TDPWSPEEDMLLDQKYAEYGPK---WNKISKFLKNRSDNNIRNRWMMIARH 100 (107)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSC---HHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHhCcC---HHHHHHHCCCCCHHHHHHHHHHHHhh
Confidence 4579999999999999999974 67888888 59999999999998843
No 45
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=89.56 E-value=0.12 Score=45.30 Aligned_cols=46 Identities=11% Similarity=0.240 Sum_probs=40.4
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
.+..|++.||.+|-.+++.|| .-...||++|+ +|+.|+++||..|-
T Consensus 17 ~~~~WT~eEd~~Ll~~v~~~G---~~W~~IA~~v~~RT~~qcr~r~~~~~ 63 (79)
T 2yus_A 17 AGREWTEQETLLLLEALEMYK---DDWNKVSEHVGSRTQDECILHFLRLP 63 (79)
T ss_dssp CSCCCCHHHHHHHHHHHHHSS---SCHHHHHHHHSSCCHHHHHHHHTTSC
T ss_pred cCCCcCHHHHHHHHHHHHHhC---CCHHHHHHHcCCCCHHHHHHHHHHhc
Confidence 356799999999999999999 34778899997 99999999999884
No 46
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=89.53 E-value=0.25 Score=46.10 Aligned_cols=47 Identities=26% Similarity=0.429 Sum_probs=41.5
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|....++||.. -..||++| ++|..+|+.||..|.+.
T Consensus 62 ~~~WT~eEd~~L~~~v~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~~k 109 (126)
T 3osg_A 62 HTPWTAEEDALLVQKIQEYGRQ---WAIIAKFFPGRTDIHIKNRWVTISNK 109 (126)
T ss_dssp CSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 4469999999999999999976 77899999 59999999999999854
No 47
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.12 E-value=0.3 Score=41.12 Aligned_cols=46 Identities=22% Similarity=0.311 Sum_probs=39.4
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
+.-|+..||.+|...+++||... -..||++|+ ++..++++||...-
T Consensus 9 ~~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~L 55 (70)
T 2dim_A 9 GGVWRNTEDEILKAAVMKYGKNQ--WSRIASLLHRKSAKQCKARWYEWL 55 (70)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSSC--HHHHHHHSTTCCHHHHHHHHHHTS
T ss_pred CCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHhcCCCHHHHHHHHHHHc
Confidence 46799999999999999999532 567888887 99999999998865
No 48
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=88.89 E-value=0.47 Score=39.85 Aligned_cols=49 Identities=18% Similarity=0.349 Sum_probs=40.2
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC---CChhHHHHHHHHhhhc
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS---RSPSEVKARYEILSKE 253 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~---~~~sei~eRy~~L~~~ 253 (846)
.+.-|++.||.+|...+++||... -..||++|+ ++..++++||..+...
T Consensus 9 ~r~~WT~eED~~L~~~v~~~G~~~--W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p 60 (69)
T 1ity_A 9 KRQAWLWEEDKNLRSGVRKYGEGN--WSKILLHYKFNNRTSVMLKDRWRTMKKL 60 (69)
T ss_dssp SCCCCCHHHHHHHHHHHHHHCSSC--HHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCc--HHHHHHHcCcCCCCHHHHHHHHHHHcCC
Confidence 356799999999999999999642 456677775 9999999999998744
No 49
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=87.30 E-value=0.38 Score=44.70 Aligned_cols=47 Identities=21% Similarity=0.370 Sum_probs=40.9
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|-...++||.. -..||++| ++|..+|+.||..|.+.
T Consensus 79 ~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~r~~~~~~~ 126 (128)
T 1h8a_C 79 KTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAVKNHWNSTMRR 126 (128)
T ss_dssp CSCCCHHHHHHHHHHHHHHCSC---HHHHGGGSTTCCHHHHHHHHHTTTTC
T ss_pred cccCCHHHHHHHHHHHHHHCcC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 4579999999999999999974 67889999 59999999999988643
No 50
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=85.57 E-value=0.54 Score=42.51 Aligned_cols=46 Identities=24% Similarity=0.409 Sum_probs=38.4
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
|..|+..||.+|..+++.||..+ -..||++|+ +++.++.+||...-
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~L 47 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKD--WIRISQLMITRNPRQCRERWNNYI 47 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSC--HHHHHHHTTTSCHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC--HHHHhhhcCCCCHHHHHHHHHHHH
Confidence 56799999999999999999632 567888885 99999999998754
No 51
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=85.56 E-value=0.5 Score=42.32 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=39.9
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~ 251 (846)
|..|+..||.+|..+++.||... -..||++| ++++.++.+||...-
T Consensus 4 k~~WT~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l 50 (105)
T 1gv2_A 4 KGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHL 50 (105)
T ss_dssp CSCCCHHHHHHHHHHHHHHCTTC--HHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCc--HHHHhhhhcCCCHHHHHHHHHhcc
Confidence 56799999999999999999742 66889999 599999999998865
No 52
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=85.38 E-value=0.17 Score=44.94 Aligned_cols=47 Identities=17% Similarity=0.180 Sum_probs=41.0
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|-..+++||.. ...||++|+ +|..+|++||..+...
T Consensus 16 ~~~WT~eEd~~l~~~~~~~G~~---W~~IA~~l~gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 16 FQGWTEEEMGTAKKGLLEHGRN---WSAIARMVGSKTVSQCKNFYFNYKKR 63 (89)
Confidence 4569999999999999999984 888999987 9999999999877744
No 53
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=82.93 E-value=1.2 Score=50.74 Aligned_cols=44 Identities=23% Similarity=0.365 Sum_probs=40.6
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHHh
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMTC 599 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~~ 599 (846)
...||.-|..+|+.++..||+|.-.||+.| |+||-.||-.|...
T Consensus 380 ~~~WT~eE~~~f~~al~~yGkdw~~IA~~V--gTKT~~Qvk~fy~~ 423 (482)
T 2xag_B 380 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 423 (482)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHh--CCCCHHHHHHHHHH
Confidence 567999999999999999999999999987 89999999888764
No 54
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=82.03 E-value=0.87 Score=42.37 Aligned_cols=46 Identities=22% Similarity=0.435 Sum_probs=40.0
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhh
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILS 251 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~ 251 (846)
-|..|+..||.+|...++.||. --..||++| ++++.++.+||...-
T Consensus 10 kk~~WT~eED~~L~~~v~~~G~---~W~~Ia~~~~~Rt~~qcr~Rw~~~l 56 (126)
T 3osg_A 10 KKQKFTPEEDEMLKRAVAQHGS---DWKMIAATFPNRNARQCRDRWKNYL 56 (126)
T ss_dssp SSCCCCHHHHHHHHHHHHHHTT---CHHHHHHTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHhhhc
Confidence 3577999999999999999997 377888888 699999999998755
No 55
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=81.69 E-value=0.99 Score=42.20 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=40.8
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|-...++||.. -..||++| ++|..+|+.||..+...
T Consensus 54 ~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~l~~ 101 (131)
T 3zqc_A 54 KHAWTPEEDETIFRNYLKLGSK---WSVIAKLIPGRTDNAIKNRWNSSISK 101 (131)
T ss_dssp CSCCCHHHHHHHHHHHHHSCSC---HHHHTTTSTTCCHHHHHHHHHHTTGG
T ss_pred CCCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4569999999999999999976 67889999 69999999999887744
No 56
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=81.38 E-value=2.6 Score=35.65 Aligned_cols=43 Identities=33% Similarity=0.564 Sum_probs=36.1
Q ss_pred CCCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYM 597 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m 597 (846)
....||.-|-.+|+.++..||.+--.||..| +.+|=.+|-.+.
T Consensus 8 ~~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~--~~Rt~~q~k~r~ 50 (72)
T 2cu7_A 8 YSVKWTIEEKELFEQGLAKFGRRWTKISKLI--GSRTVLQVKSYA 50 (72)
T ss_dssp CCCCCCHHHHHHHHHHHHHTCSCHHHHHHHH--SSSCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHHH
Confidence 4568999999999999999999999999976 568877765443
No 57
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=81.24 E-value=1 Score=41.75 Aligned_cols=47 Identities=15% Similarity=0.234 Sum_probs=40.0
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhh
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILS 251 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~ 251 (846)
.|..|++.||.+|...+++||... -..||++| +++..++.+||...-
T Consensus 26 ~k~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l 73 (128)
T 1h8a_C 26 NKGPWTKEEDQRVIEHVQKYGPKR--WSDIAKHLKGRIGKQCRERWHNHL 73 (128)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCSCC--HHHHHHHSSSCCHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHhcCCcHHHHHHHHHHhc
Confidence 356799999999999999999742 56788888 499999999998865
No 58
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=81.03 E-value=0.96 Score=43.44 Aligned_cols=47 Identities=19% Similarity=0.368 Sum_probs=40.6
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
+..|++.||.+|-...++||.. -..||++|+ +|..+|+.||..|.+.
T Consensus 110 ~~~WT~eEd~~L~~~~~~~g~~---W~~Ia~~l~gRt~~~~knr~~~~~r~ 157 (159)
T 1h89_C 110 KTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 157 (159)
T ss_dssp CSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHTTTCC
T ss_pred ccCCChHHHHHHHHHHHHHCCC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 5679999999999999999974 678888885 9999999999988643
No 59
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=80.49 E-value=2.4 Score=36.97 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=38.9
Q ss_pred CCCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHHh
Q 003112 553 DEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMTC 599 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~~ 599 (846)
....||.-|-.+|+.+++.||.|--.||+.| ++||=.|+-.+...
T Consensus 17 ~~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v--~~RT~~qcr~r~~~ 61 (79)
T 2yus_A 17 AGREWTEQETLLLLEALEMYKDDWNKVSEHV--GSRTQDECILHFLR 61 (79)
T ss_dssp CSCCCCHHHHHHHHHHHHHSSSCHHHHHHHH--SSCCHHHHHHHHTT
T ss_pred cCCCcCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHHH
Confidence 3568999999999999999999999999977 77998888766553
No 60
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.05 E-value=2.3 Score=36.05 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=35.6
Q ss_pred CCCCcchhhHHHHHHHHHhhC------CcchHHHHHhhCCCCcHHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFG------RNSCLIARNLLNGLKTCWEVFQYM 597 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg------~NsClIAr~Ll~g~KtC~EV~~~m 597 (846)
....||.-|-.+|+.++..|| .+--.||..| +.+|=.||-.+.
T Consensus 7 ~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~--~~Rt~~qcr~r~ 55 (75)
T 2yum_A 7 GNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADEL--GNRTAKQVASQV 55 (75)
T ss_dssp CSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHH--SSSCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHh--CCCCHHHHHHHH
Confidence 346899999999999999999 6889999987 668866765444
No 61
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=77.16 E-value=4.6 Score=32.97 Aligned_cols=43 Identities=23% Similarity=0.135 Sum_probs=35.3
Q ss_pred CCCCcchhhHHHHHHHHHhhC-CcchHHHHHhhCCCCcHHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNGLKTCWEVFQYM 597 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g~KtC~EV~~~m 597 (846)
....||+-|-.+++.+++.|| .|=-.||..| +.+|=.|+-.+.
T Consensus 7 ~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~r~ 50 (60)
T 1x41_A 7 GDPSWTAQEEMALLEAVMDCGFGNWQDVANQM--CTKTKEECEKHY 50 (60)
T ss_dssp CCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHH--TTSCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHh--CCCCHHHHHHHH
Confidence 346799999999999999999 6899999988 567766665433
No 62
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=76.97 E-value=2 Score=36.44 Aligned_cols=49 Identities=22% Similarity=0.221 Sum_probs=39.6
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHH--hhc-CCChhHHHHHHHHhhhcc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLA--QCF-SRSPSEVKARYEILSKEE 254 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~--~~~-~~~~sei~eRy~~L~~~~ 254 (846)
++.|++.||..|..-.++||.. =-.|+. .|| ++|.-+|+.||..|.+..
T Consensus 8 r~~WT~EE~~~L~~gV~k~G~~--W~~I~~~y~f~~~RT~VdLKdk~r~L~k~~ 59 (62)
T 1x58_A 8 RKDFTKEEVNYLFHGVKTMGNH--WNSILWSFPFQKGRRAVDLAHKYHRLISGP 59 (62)
T ss_dssp SSSCCHHHHHHHHHHHHHHCSC--HHHHHHHSCCCTTCCHHHHHHHHHHHHTCS
T ss_pred CCCCCHHHHHHHHHHHHHHhHh--HHHHHHhCCCccCcccchHHHHHHHHHhcc
Confidence 5789999999999999999983 333443 466 699999999999999653
No 63
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=75.74 E-value=1.3 Score=46.27 Aligned_cols=48 Identities=13% Similarity=0.337 Sum_probs=42.3
Q ss_pred hcccccchhhhhHhhhhhcCC---cHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGL---SDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~---sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
|..|++.||.+|-...+++|- +..-...||++|+ +|.-+|++||+.+-
T Consensus 8 k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L 59 (246)
T 1ign_A 8 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYL 59 (246)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 568999999999999999988 3466889999998 89999999999855
No 64
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=75.17 E-value=4.8 Score=32.76 Aligned_cols=40 Identities=28% Similarity=0.312 Sum_probs=33.4
Q ss_pred CCCcchhhHHHHHHHHHhhC-CcchHHHHHhhCC-CCcHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNG-LKTCWEVFQ 595 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g-~KtC~EV~~ 595 (846)
...||+-|-.+++.+++.|| .|=-.||+.| + .+|=.|+-.
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~--~~~Rt~~qcr~ 50 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGNWADIADYV--GNARTKEECRD 50 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTCHHHHHHHH--CSSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHH--CCCCCHHHHHH
Confidence 35799999999999999999 7999999977 5 677666543
No 65
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=74.45 E-value=2 Score=37.35 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=38.2
Q ss_pred ccccchhhhhHhhhhhcCC-cHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 206 DFVDSEDYILRMTIKEVGL-SDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 206 ~f~e~eD~~~~~~~~e~g~-sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
..++.||.+|..+|..|.. +..-.+.||.+|+ .|..|++.||++|.
T Consensus 10 ~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~ 57 (73)
T 1wgx_A 10 EWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENP 57 (73)
T ss_dssp CCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 3667788999999988864 3345788999998 99999999999996
No 66
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=71.22 E-value=1.3 Score=41.49 Aligned_cols=46 Identities=26% Similarity=0.435 Sum_probs=35.5
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~ 251 (846)
|.-|+..||.+|..++++||..+ -..||++| ++++.++.+||...-
T Consensus 2 Kg~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~l 48 (131)
T 3zqc_A 2 KGPFTEAEDDLIREYVKENGPQN--WPRITSFLPNRSPKQCRERWFNHL 48 (131)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSCC--GGGGTTSCTTSCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCcCC--HHHHHHHHCCCCHHHHHHHHhhcc
Confidence 55688888999988888888642 55777878 588889999986554
No 67
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=70.73 E-value=2 Score=45.45 Aligned_cols=29 Identities=34% Similarity=0.618 Sum_probs=26.4
Q ss_pred CCCCCCcccCCCcccccCCCCCccccccC
Q 003112 684 ACGKQCPCLLNGTCCEKYCGCPKSCKNRF 712 (846)
Q Consensus 684 pC~~~C~C~~~g~~CEk~C~C~~~C~nRF 712 (846)
+|+.+|.+......|...|.|+..|.||.
T Consensus 82 ~C~~~C~nr~~~~EC~~~C~C~~~C~Nr~ 110 (278)
T 3h6l_A 82 ACGEDCLNRLLMIECSSRCPNGDYCSNRR 110 (278)
T ss_dssp SSCTTCTTGGGTBCCCTTCTTGGGCSSCT
T ss_pred CCCCCCCCcceEeccCCCCCcCCCCCCcc
Confidence 78889999999999999999999999985
No 68
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=70.44 E-value=6.9 Score=30.70 Aligned_cols=40 Identities=25% Similarity=0.216 Sum_probs=32.9
Q ss_pred CCCcchhhHHHHHHHHHhhCC-cchHHHHHhhCCCCcHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGR-NSCLIARNLLNGLKTCWEVFQ 595 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~-NsClIAr~Ll~g~KtC~EV~~ 595 (846)
...||+-|-.++..++..||. +--.||..| +.+|=.|+-.
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 43 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDDWKVIANYL--PNRTDVQCQH 43 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--CCCCHHHHHH
Confidence 467999999999999999998 899999977 4466555543
No 69
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=70.20 E-value=2.7 Score=40.25 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=39.2
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhc-CCChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCF-SRSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~-~~~~sei~eRy~~L~ 251 (846)
|..|++.||.+|....++||... -..||++| +++..++.+||..+-
T Consensus 58 ~~~Wt~eEd~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l 104 (159)
T 1h89_C 58 KGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHL 104 (159)
T ss_dssp CSCCCHHHHHHHHHHHHHHCSCC--HHHHHHTSTTCCHHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHHHHhCccc--HHHHHHHcCCCCHHHHHHHHHHHh
Confidence 56799999999999999999742 45678888 599999999998865
No 70
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.21 E-value=3.4 Score=34.07 Aligned_cols=48 Identities=15% Similarity=0.153 Sum_probs=40.3
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
....|++.||.++...+..||- -+..||.+|+ +|+.++.++|-.-++.
T Consensus 11 ~~~~WT~eE~~~F~~~~~~~gk---~w~~Ia~~l~~rt~~~~v~~Yy~~Kk~ 59 (61)
T 2eqr_A 11 FMNVWTDHEKEIFKDKFIQHPK---NFGLIASYLERKSVPDCVLYYYLTKKN 59 (61)
T ss_dssp CCCSCCHHHHHHHHHHHHHSTT---CHHHHHHHCTTSCHHHHHHHHHHHTCC
T ss_pred cCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHHHhcCC
Confidence 3466899999999999999993 4888999998 8999999999776643
No 71
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=67.13 E-value=9.8 Score=30.76 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=34.5
Q ss_pred CCCCcchhhHHHHHHHHHhhC-CcchHHHHHhhCCCCcHHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNGLKTCWEVFQYM 597 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g~KtC~EV~~~m 597 (846)
....||+-|-.++..++..|| .+--.||..| ..+|=.|+-.+.
T Consensus 7 ~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~Rw 50 (60)
T 2d9a_A 7 GKVKWTHEEDEQLRALVRQFGQQDWKFLASHF--PNRTDQQCQYRW 50 (60)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHC--SSSCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--cCCCHHHHHHHH
Confidence 346799999999999999999 5999999987 446666665433
No 72
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.30 E-value=9.7 Score=31.42 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=31.4
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVF 594 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~ 594 (846)
...||.-|-.++..+++.||.+-..||. |. | +|=.|+-
T Consensus 9 k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~-g-Rt~~qcr 46 (66)
T 2din_A 9 KTEWSREEEEKLLHLAKLMPTQWRTIAP-II-G-RTAAQCL 46 (66)
T ss_dssp CCCCCHHHHHHHHHHHHHCTTCHHHHHH-HH-S-SCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHhc-cc-C-cCHHHHH
Confidence 4679999999999999999999999999 53 4 6655553
No 73
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=65.86 E-value=3.1 Score=34.17 Aligned_cols=26 Identities=31% Similarity=1.071 Sum_probs=20.6
Q ss_pred CCcccCC-------CCccCCCCccccccCccCC
Q 003112 713 RGCHCAK-------SQCRSRQCPCFAADRECDP 738 (846)
Q Consensus 713 ~GC~C~~-------~qC~t~~CpC~~a~rECDP 738 (846)
++|+|.. -.|....||||..+.-|.-
T Consensus 5 ~~CrCG~~~~~~~~~TC~~~RCpCY~~~~sC~~ 37 (52)
T 2lua_A 5 PKCRCGISGSSNTLTTCRNSRCPCYKSYNSCAG 37 (52)
T ss_dssp CCCCBTTBSCCCSSSTTTSTTCHHHHTTCCCSS
T ss_pred cccccCcccCCCCceeEcCCccceecCCCccCC
Confidence 5677732 2699999999999999974
No 74
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=69.37 E-value=1.3 Score=39.36 Aligned_cols=42 Identities=33% Similarity=0.405 Sum_probs=35.0
Q ss_pred CCCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQY 596 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~ 596 (846)
....||.-|-.+|..++..||.+-..||..| +.+|=.+|-.+
T Consensus 15 ~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l--~gRt~~q~k~r 56 (89)
T 2ltp_A 15 YFQGWTEEEMGTAKKGLLEHGRNWSAIARMV--GSKTVSQCKNF 56 (89)
Confidence 3567999999999999999999999999977 55776666443
No 75
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=64.68 E-value=5.5 Score=34.42 Aligned_cols=43 Identities=12% Similarity=0.029 Sum_probs=33.4
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCC-CcHHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGL-KTCWEVFQYM 597 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~-KtC~EV~~~m 597 (846)
...||+-|-.++..++..||..-..||..| +-+ ..|++=|..|
T Consensus 23 k~~wT~EED~~L~~l~~~~G~kW~~IA~~l-gRt~~q~knRw~~L 66 (73)
T 2llk_A 23 VGKYTPEEIEKLKELRIKHGNDWATIGAAL-GRSASSVKDRCRLM 66 (73)
T ss_dssp CCSSCHHHHHHHHHHHHHHSSCHHHHHHHH-TSCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCHHHHHHHh-CCCHHHHHHHHHHH
Confidence 468999999999999999999999999988 322 3344445443
No 76
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=64.50 E-value=2.1 Score=33.23 Aligned_cols=25 Identities=28% Similarity=0.719 Sum_probs=20.2
Q ss_pred hhhcccccccccccc---cccCcCCCCCccc
Q 003112 281 LDSFDNLFCRRCLVF---DCRLHGCSQDLVF 308 (846)
Q Consensus 281 LdSfdnlfCRRClvf---DC~lHgcsQ~Li~ 308 (846)
++..+.|||--|--| +|+.|| |++|
T Consensus 6 ~~~~~yl~CE~C~~~~~~~Cp~HG---P~~f 33 (39)
T 2l9z_A 6 MATLFTIWCTLCDRAYPSDCPEHG---PVTF 33 (39)
T ss_dssp SCCSCSEEEGGGTEEESSSBTTTB---SCSC
T ss_pred chhhhhhHHHHHhhhchhhchhcC---CCcc
Confidence 356689999999877 899999 5555
No 77
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=63.83 E-value=5.3 Score=40.46 Aligned_cols=29 Identities=24% Similarity=0.563 Sum_probs=22.7
Q ss_pred CCCCCCcccCCCccccc-CCCCCccccccC
Q 003112 684 ACGKQCPCLLNGTCCEK-YCGCPKSCKNRF 712 (846)
Q Consensus 684 pC~~~C~C~~~g~~CEk-~C~C~~~C~nRF 712 (846)
.|+.+|.+......|.. .|.|+..|.||.
T Consensus 37 ~c~~~C~nr~~~~EC~~~~C~C~~~C~Nr~ 66 (222)
T 3ope_A 37 GCVDDCLNRMIFAECSPNTCPCGEQCCNQR 66 (222)
T ss_dssp SSCSCCTTGGGTBCCCTTTCTTTTSCSSCT
T ss_pred CCcccCcCcCeEeEeCCCCCcCCCCCCCce
Confidence 36678888888888885 788888888874
No 78
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=61.87 E-value=6.4 Score=33.95 Aligned_cols=45 Identities=18% Similarity=0.215 Sum_probs=35.6
Q ss_pred CCCCCcchhhHHHHHHHHHhhC----CcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 552 SDEKSWKTIEKGLFDKGVEIFG----RNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 552 ~~~~~Wt~~E~~L~~k~~eifg----~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
.....||.-|-.+|+.++.+|| ++-=.||..| +.||=.||-.+..
T Consensus 16 ~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~v--pGRT~~qcr~Ry~ 64 (73)
T 2cqr_A 16 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCV--PSKSKEDCIARYK 64 (73)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGC--SSSCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHHHHH
Confidence 4567899999999999999999 5678899876 5588777755443
No 79
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=61.81 E-value=9.7 Score=30.14 Aligned_cols=43 Identities=21% Similarity=0.236 Sum_probs=32.3
Q ss_pred CCcchhhHHHHHHHHHhhC-CcchHHHHHhhCCCCc---HHHHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNGLKT---CWEVFQYM 597 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g~Kt---C~EV~~~m 597 (846)
..||+-|-.++..+++.|| .|=-.||..+-...+| |.+=|..+
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~ 49 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTM 49 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 5799999999999999999 5899999977200344 55545433
No 80
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=61.72 E-value=12 Score=29.46 Aligned_cols=41 Identities=20% Similarity=0.218 Sum_probs=33.3
Q ss_pred CCCcchhhHHHHHHHHHhhCC-cchHHHHHhhCCCCcHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGR-NSCLIARNLLNGLKTCWEVFQY 596 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~-NsClIAr~Ll~g~KtC~EV~~~ 596 (846)
...||+-|-.++..++..||. |--.||..| +.+|=.++-.+
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~R 44 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL--KGRIGKQCRER 44 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS--TTCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcChHHHHHHHc--CCCCHHHHHHH
Confidence 467999999999999999997 799999977 45665555543
No 81
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.52 E-value=17 Score=30.28 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=34.3
Q ss_pred CCCCcchhhHHHHHHHHHhhC-CcchHHHHHhhCCCCcHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNGLKTCWEVFQY 596 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g~KtC~EV~~~ 596 (846)
....||+-|-.++..++..|| .|=-.||..| +.+|=.|+-.+
T Consensus 8 k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l--~~Rt~~qcr~R 50 (70)
T 2dim_A 8 KGGVWRNTEDEILKAAVMKYGKNQWSRIASLL--HRKSAKQCKAR 50 (70)
T ss_dssp TTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHS--TTCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHh--cCCCHHHHHHH
Confidence 346899999999999999999 6899999977 45776666543
No 82
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=55.97 E-value=8.1 Score=34.11 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=35.5
Q ss_pred ccccchhhhhHhhhhhcCCcHHHHHHHHh-----hcCCChhHHHHHHHHhhhc
Q 003112 206 DFVDSEDYILRMTIKEVGLSDATLESLAQ-----CFSRSPSEVKARYEILSKE 253 (846)
Q Consensus 206 ~f~e~eD~~~~~~~~e~g~sd~vl~~l~~-----~~~~~~sei~eRy~~L~~~ 253 (846)
.|++.||.+|...+++||... -..|+. |-++|.-+|+.||.+|.+.
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~--W~~I~~~~~~~~~~RT~~~lKdrWrnllk~ 52 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGR--WRDVKMRAFDNADHRTYVDLKDKWKTLVHT 52 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSC--HHHHHHHHCTTCTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCC--cHHHHHhhccccCCCCHHHHHHHHHHHHHh
Confidence 488899999999999999832 222332 3469999999999999843
No 83
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=55.59 E-value=17 Score=33.57 Aligned_cols=49 Identities=14% Similarity=0.232 Sum_probs=38.2
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHh-h----cCCChhHHHHHHHHhhhc
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQ-C----FSRSPSEVKARYEILSKE 253 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~-~----~~~~~sei~eRy~~L~~~ 253 (846)
-+.-|++.||.+|...+++||... -..|+. + -++|.-+|+.||.+|.+.
T Consensus 12 ~r~~WT~EEd~~L~~gV~k~G~g~--W~~I~~~~~~~f~~RT~v~lKdrWrnllk~ 65 (105)
T 2aje_A 12 IRRPFSVAEVEALVQAVEKLGTGR--WRDVKLCAFEDADHRTYVDLKDKWKTLVHT 65 (105)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCSSS--HHHHHSSSSSSTTCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCC--hHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 357799999999999999999832 223333 2 369999999999999954
No 84
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=52.34 E-value=22 Score=29.62 Aligned_cols=45 Identities=20% Similarity=0.232 Sum_probs=33.6
Q ss_pred CCCCcchhhHHHHHHHHHhhC-CcchHHHHHhhCCCCc---HHHHHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNGLKT---CWEVFQYM 597 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g~Kt---C~EV~~~m 597 (846)
....||+-|-.++..+++.|| .+=-.||..|-...+| |.+=|..+
T Consensus 9 ~r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~ 57 (69)
T 1ity_A 9 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTM 57 (69)
T ss_dssp SCCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHH
Confidence 357799999999999999999 5899999977200455 55545444
No 85
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=52.21 E-value=8.4 Score=40.94 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=16.4
Q ss_pred cCceeeeccccCCCcee-Eeeee
Q 003112 786 SGWGAFLKNSVGKHEYL-GEYTG 807 (846)
Q Consensus 786 kGwGLFA~EdIkKGeFI-~EYvG 807 (846)
...++||..+|++|+-| +-|..
T Consensus 240 ~~i~~~A~rdI~~GEELt~dY~~ 262 (299)
T 1mvh_A 240 YDLAFFAIKDIQPLEELTFDYAG 262 (299)
T ss_dssp CEEEEEESSCBCTTCBCEECCCT
T ss_pred eEEEEEEccCcCCCCEEEEEcCC
Confidence 35789999999999765 44543
No 86
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=52.06 E-value=18 Score=32.62 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=34.5
Q ss_pred CCCCcchhhHHHHHHHHHhhC----CcchHHHHHhhCCCCcHHHHHHHHHh
Q 003112 553 DEKSWKTIEKGLFDKGVEIFG----RNSCLIARNLLNGLKTCWEVFQYMTC 599 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg----~NsClIAr~Ll~g~KtC~EV~~~m~~ 599 (846)
....||.-|-.+|+.++..|| +.-=.||..| +.||=.||-.+...
T Consensus 7 ~~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~v--pGRT~~q~k~ry~~ 55 (93)
T 2cjj_A 7 SGRPWSAKENKAFERALAVYDKDTPDRWANVARAV--EGRTPEEVKKHYEI 55 (93)
T ss_dssp -CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHS--TTCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHHHHHH
Confidence 356899999999999999997 4567899977 45887777544443
No 87
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=51.13 E-value=10 Score=35.90 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=37.2
Q ss_pred hcccccchhhhhHhhhhhcCCc--HHHHHHHH-hhcCCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLS--DATLESLA-QCFSRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~s--d~vl~~l~-~~~~~~~sei~eRy~~L~~~ 253 (846)
+.-|++.||..|...+++||.. -.|+..+- .|-++|.-+|+.||.+|.+.
T Consensus 31 r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~ 83 (122)
T 2roh_A 31 RRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHT 83 (122)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 5678999999999999999973 12332211 12479999999999999854
No 88
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=51.09 E-value=24 Score=29.33 Aligned_cols=45 Identities=22% Similarity=0.350 Sum_probs=33.9
Q ss_pred CCCcchhhHHHHHHHHHhhCC-cchHHHHHhhCCCCc---HHHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGR-NSCLIARNLLNGLKT---CWEVFQYMT 598 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~-NsClIAr~Ll~g~Kt---C~EV~~~m~ 598 (846)
-..||+-|-.++..++..||. +-..||..+-...+| |.+=|.-|.
T Consensus 11 k~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~ 59 (64)
T 3sjm_A 11 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMK 59 (64)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHh
Confidence 467999999999999999995 899999875112345 666665444
No 89
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=46.83 E-value=14 Score=40.96 Aligned_cols=48 Identities=25% Similarity=0.469 Sum_probs=39.5
Q ss_pred hcccccchhhhhHhhhhhcCC-----cHHHHHHHHhh---------cCCChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGL-----SDATLESLAQC---------FSRSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~-----sd~vl~~l~~~---------~~~~~sei~eRy~~L~ 251 (846)
++.|++.||++|=..+-.||+ =++|-..|... -++|+.||+.|...|-
T Consensus 228 ~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwF~kSRT~~EL~rRc~tLi 289 (374)
T 2y9y_A 228 KRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLL 289 (374)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHCSGGGSCHHHHTCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 578999999999888888888 67776655543 3499999999999998
No 90
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=46.46 E-value=8.4 Score=40.74 Aligned_cols=21 Identities=24% Similarity=0.154 Sum_probs=15.7
Q ss_pred CceeeeccccCCCceeEeeee
Q 003112 787 GWGAFLKNSVGKHEYLGEYTG 807 (846)
Q Consensus 787 GwGLFA~EdIkKGeFI~EYvG 807 (846)
-.++||..+|++|+-|.---|
T Consensus 244 ~i~~~A~RdI~~GEELT~dYg 264 (287)
T 3hna_A 244 RIAFFSTRLIEAGEQLGFDYG 264 (287)
T ss_dssp EEEEEESSCBCTTCBCEECCC
T ss_pred eEEEEEcceeCCCCeEEEeCC
Confidence 478999999999987654434
No 91
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=46.27 E-value=20 Score=32.50 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=36.2
Q ss_pred cccccchhhhhHhhhhhcCCcHHHHHHHHhhc------CCChhHHHHHHHHhh
Q 003112 205 KDFVDSEDYILRMTIKEVGLSDATLESLAQCF------SRSPSEVKARYEILS 251 (846)
Q Consensus 205 ~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~------~~~~sei~eRy~~L~ 251 (846)
...+..|+..|--..+++||- +-+|+..+ ++|.++||+||-.+.
T Consensus 31 ~~WTkEETd~Lf~L~~~fdlR---W~vI~DRy~~~~~~~Rt~EdLK~RyY~v~ 80 (93)
T 3hm5_A 31 DAWTKAETDHLFDLSRRFDLR---FVVIHDRYDHQQFKKRSVEDLKERYYHIC 80 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTTC---HHHHHHHSCTTTSCCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCC---eeeehhhhccCCCCCCCHHHHHHHHHHHH
Confidence 357777889999899999987 55677777 599999999998776
No 92
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=46.26 E-value=11 Score=35.62 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=38.1
Q ss_pred hhcccccchhhhhHhhhhhcCCcHHHHHHHHhh-----cCCChhHHHHHHHHhhhc
Q 003112 203 EKKDFVDSEDYILRMTIKEVGLSDATLESLAQC-----FSRSPSEVKARYEILSKE 253 (846)
Q Consensus 203 ~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~-----~~~~~sei~eRy~~L~~~ 253 (846)
-+.-|++.||.+|....++||... -..|+.. -++|.-+|+.||.+|.+.
T Consensus 16 ~r~~WT~EEd~~L~~gV~k~G~G~--W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~ 69 (121)
T 2juh_A 16 IRRPFSVAEVEALVEAVEHLGTGR--WRDVKMRAFDNADHRTYVDLKDKWKTLVHT 69 (121)
T ss_dssp SSCCCCHHHHHHHHHHHHHHGGGC--HHHHHHHHCSCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 457799999999999999999621 2233333 479999999999999853
No 93
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=44.13 E-value=36 Score=29.57 Aligned_cols=46 Identities=15% Similarity=0.151 Sum_probs=36.8
Q ss_pred CCCCCcchhhHHHHHHHHHhhCCc----chHHHHHhhCCCCcHHHHHHHHHh
Q 003112 552 SDEKSWKTIEKGLFDKGVEIFGRN----SCLIARNLLNGLKTCWEVFQYMTC 599 (846)
Q Consensus 552 ~~~~~Wt~~E~~L~~k~~eifg~N----sClIAr~Ll~g~KtC~EV~~~m~~ 599 (846)
.....||..|..+|+.++.+|+.. -=.||..+ +.||=.||-++...
T Consensus 6 ~~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V--~gKT~eE~~~hY~~ 55 (73)
T 1wgx_A 6 SGDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAV--GSRSPEECQRKYME 55 (73)
T ss_dssp CSSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHT--TTSCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHc--CCCCHHHHHHHHHH
Confidence 456789999999999999999862 34699866 66998888766553
No 94
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=43.72 E-value=4.9 Score=45.82 Aligned_cols=43 Identities=19% Similarity=0.334 Sum_probs=0.0
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
...||..|+.+|..++..||+|+-.|+..| ..|+-.|+-+|..
T Consensus 189 ~d~WT~eE~~lFe~al~~yGKdF~~I~~~l--p~Ksv~e~V~yYY 231 (482)
T 2xag_B 189 PDEWTVEDKVLFEQAFSFHGKTFHRIQQML--PDKSIASLVKFYY 231 (482)
T ss_dssp ---------------------------------------------
T ss_pred ccccCHHHHHHHHHHHHHcCccHHHHHHHc--CCCCHHHHHHHhc
Confidence 357999999999999999999999999866 7899999877765
No 95
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=43.30 E-value=30 Score=30.97 Aligned_cols=69 Identities=13% Similarity=0.204 Sum_probs=45.6
Q ss_pred cccceecCCCCeeeecCCchhhchhhhhhcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 176 RRRIYYDQNGGEALICSDSEEEVIEEEEKKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 176 rR~IyYD~~g~EalicSdseee~~eee~k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
||..|+|-|| ++.|-...-.+-..-..|++.|-.+....+..||=+ |..|+++|+ .|+.|+-+=|=.-|
T Consensus 19 ~~~~f~d~n~----lv~dp~~~~~~r~~~~~WT~eE~~~F~~~~~~~gK~---F~~Ia~~l~~Kt~~~cV~~YY~~K 88 (94)
T 4a69_C 19 QRIKFINMNG----LMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKN---FGLIASFLERKTVAECVLYYYLTK 88 (94)
T ss_dssp ---CCBCTTS----BBSCHHHHHHHHHHTCCCCHHHHHHHHHHHHHSTTC---HHHHHHTCTTCCHHHHHHHHHHHS
T ss_pred HhheecccCC----cccCHHHHHhccCCCCCCCHHHHHHHHHHHHHcCCC---HHHHHHHcCCCCHHHHHHHHhccc
Confidence 3456777777 344432211123345668888888888888888854 788899999 88999988775554
No 96
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=42.14 E-value=37 Score=29.06 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=35.4
Q ss_pred CCCcchhhHHHHHHHHHhhCC----cchHHHHHhhCCCCcHHHHHHHHHhh
Q 003112 554 EKSWKTIEKGLFDKGVEIFGR----NSCLIARNLLNGLKTCWEVFQYMTCS 600 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~----NsClIAr~Ll~g~KtC~EV~~~m~~~ 600 (846)
...||.-|..+|.+++.+|+. .-=.||..| | ||=.||-++....
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l--g-Rt~~eV~~~y~~L 55 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--G-RSVTDVTTKAKQL 55 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--T-SCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh--C-CCHHHHHHHHHHH
Confidence 467999999999999999984 345799876 4 8988887766544
No 97
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=38.97 E-value=19 Score=39.75 Aligned_cols=31 Identities=13% Similarity=-0.115 Sum_probs=27.6
Q ss_pred cceEEEEEecccCceeeeccccCCCceeEee
Q 003112 775 QQRVLLGRSDVSGWGAFLKNSVGKHEYLGEY 805 (846)
Q Consensus 775 ~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EY 805 (846)
...|+++.+..+|.||+|..+|+.|+.|..=
T Consensus 6 ~~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e 36 (433)
T 3qww_A 6 RGGLERFCSAGKGRGLRALRPFHVGDLLFSC 36 (433)
T ss_dssp STTEEEEECTTSCEEEEESSCBCTTCEEEEE
T ss_pred CCcEEEeecCCCcCeEEECCCCCCCCEEEec
Confidence 3678999999999999999999999988653
No 98
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=38.89 E-value=20 Score=40.22 Aligned_cols=33 Identities=12% Similarity=-0.017 Sum_probs=29.0
Q ss_pred ccceEEEEEecccCceeeeccccCCCceeEeee
Q 003112 774 QQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYT 806 (846)
Q Consensus 774 ~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYv 806 (846)
....|.++.+..+|.||+|..+|+.|+.|..=.
T Consensus 5 ~~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~ 37 (490)
T 3n71_A 5 SMENVEVFTSEGKGRGLKATKEFWAADVIFAER 37 (490)
T ss_dssp CCTTEEEEECSSSCEEEEESSCBCTTCEEEEEC
T ss_pred CCCceEEEecCCCCceEEeccCCCCCCEEEecC
Confidence 356799999999999999999999999997643
No 99
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=37.50 E-value=25 Score=37.88 Aligned_cols=48 Identities=25% Similarity=0.390 Sum_probs=37.0
Q ss_pred hcccccchhhhhHhhhhhcCCc-HHHHHHH----H---------hhcCCChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLS-DATLESL----A---------QCFSRSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~s-d~vl~~l----~---------~~~~~~~sei~eRy~~L~ 251 (846)
++.|++.||++|=..+..||+. +.+.+.| . =+.++||.||+.|...|-
T Consensus 212 ~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwf~kSRTp~el~rRc~tLi 273 (304)
T 1ofc_X 212 GKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLI 273 (304)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 4789999999999889999983 2344433 3 234599999999998886
No 100
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=36.24 E-value=30 Score=36.60 Aligned_cols=21 Identities=38% Similarity=0.974 Sum_probs=14.8
Q ss_pred CCCCCCCC-CCCC-CCCcccCCC
Q 003112 675 QYNPCGCQ-TACG-KQCPCLLNG 695 (846)
Q Consensus 675 ~y~PC~h~-gpC~-~~C~C~~~g 695 (846)
.+.-|+|. +.|. ..|+|...+
T Consensus 58 ~~~gC~C~~~~C~~~~C~C~~~~ 80 (290)
T 3bo5_A 58 TFPGCICVKTPCLPGTCSCLRHG 80 (290)
T ss_dssp CCCCCCCCSSCCCTTTCGGGTTS
T ss_pred cCCCCCCCCCCcCCCCCcchhhc
Confidence 35678886 5786 578887754
No 101
>4mt2_A Metallothionein isoform II; 2.00A {Rattus rattus} SCOP: g.46.1.1 PDB: 2mrt_A 1mrt_A 1mhu_A 1dfs_A 2mhu_A 1dft_A 2mrb_A
Probab=35.52 E-value=76 Score=26.81 Aligned_cols=44 Identities=39% Similarity=1.143 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCCCC-CCCcccCCCcccccC-CC-CCccccccCCCcccCCC
Q 003112 673 CRQYNPCGCQTACG-KQCPCLLNGTCCEKY-CG-CPKSCKNRFRGCHCAKS 720 (846)
Q Consensus 673 ~~~y~PC~h~gpC~-~~C~C~~~g~~CEk~-C~-C~~~C~nRF~GC~C~~~ 720 (846)
+.--++|.+.+.|. ++|.|. .|.|. |. |+..|.+=-+||-|+..
T Consensus 8 C~~ggsC~C~~sCkCk~CkCt----sCKKscCsCCP~gCakCAqgCvCKg~ 54 (62)
T 4mt2_A 8 CATDGSCSCAGSCKCKQCKCT----SCKKSCCSCCPVGCAKCSQGCICKEA 54 (62)
T ss_dssp SCSSSCCCCTTCSCCSSCCCT----TCCCCSSTTSCTTCTTTTTSCCSCTT
T ss_pred cCCCCcccCCCccccCCcccC----ccccccccccccchhHhhccceecCC
Confidence 44556777776665 677774 46665 34 57788888899999643
No 102
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=35.02 E-value=27 Score=38.40 Aligned_cols=30 Identities=17% Similarity=-0.028 Sum_probs=26.9
Q ss_pred cceEEEEEecccCceeeeccccCCCceeEe
Q 003112 775 QQRVLLGRSDVSGWGAFLKNSVGKHEYLGE 804 (846)
Q Consensus 775 ~kkL~V~kS~ikGwGLFA~EdIkKGeFI~E 804 (846)
...|..+.+..+|.||+|..+|+.|+.|..
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~ 33 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFR 33 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEe
Confidence 456788889999999999999999999886
No 103
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=30.91 E-value=36 Score=25.34 Aligned_cols=10 Identities=50% Similarity=1.431 Sum_probs=5.1
Q ss_pred cccccCCCCC
Q 003112 696 TCCEKYCGCP 705 (846)
Q Consensus 696 ~~CEk~C~C~ 705 (846)
.-|.|.|.|+
T Consensus 14 eqcqkscscp 23 (36)
T 1rju_V 14 EQCQKSCSCP 23 (36)
T ss_dssp GGGTTSCCSC
T ss_pred HHHhhcCCCC
Confidence 3455555554
No 104
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=28.95 E-value=41 Score=35.10 Aligned_cols=45 Identities=13% Similarity=0.293 Sum_probs=38.3
Q ss_pred cccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhh
Q 003112 205 KDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSK 252 (846)
Q Consensus 205 ~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~ 252 (846)
..|++.|+.++-.+++.||=. +..||++|+ .|..+|+..|-.-++
T Consensus 134 ~~WTeEE~~lFleAl~kYGKD---W~~IAk~VgTKT~~QcKnfY~~~kK 179 (235)
T 2iw5_B 134 ARWTTEEQLLAVQAIRKYGRD---FQAISDVIGNKSVVQVKNFFVNYRR 179 (235)
T ss_dssp SSCCHHHHHHHHHHHHHHSSC---HHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 347777888888999999965 999999999 899999999976663
No 105
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=27.42 E-value=50 Score=27.99 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=26.2
Q ss_pred CCCCcchhhHHHHHHHHHhhCCcchHHHH
Q 003112 553 DEKSWKTIEKGLFDKGVEIFGRNSCLIAR 581 (846)
Q Consensus 553 ~~~~Wt~~E~~L~~k~~eifg~NsClIAr 581 (846)
+...||.-|..+++.|++.||.+=-.|+.
T Consensus 7 ~r~~WT~EE~~~L~~gV~k~G~~W~~I~~ 35 (62)
T 1x58_A 7 GRKDFTKEEVNYLFHGVKTMGNHWNSILW 35 (62)
T ss_dssp CSSSCCHHHHHHHHHHHHHHCSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhHhHHHHHH
Confidence 46789999999999999999998888875
No 106
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=27.13 E-value=60 Score=26.41 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=23.3
Q ss_pred hhhhhH-HHHHHHHHHHHHHHHHHHHHHHh
Q 003112 33 KEILSV-IDCLKNQVAADHFVSVQRRVEKN 61 (846)
Q Consensus 33 ~~~l~~-i~~LKkqi~~eR~~~Ik~k~e~n 61 (846)
...|.. ...||.|+=.+|+..|+.++++=
T Consensus 15 l~~LEkqF~~LkEqlY~ERl~ql~~~Leel 44 (49)
T 2xus_A 15 MLDLEKQFSELKEKLFRERLSQLRLRLEEV 44 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344454 77899999999999999988763
No 107
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=27.07 E-value=38 Score=38.36 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=29.7
Q ss_pred eEEEEEecccCceeeeccccCCCceeEeeeee-eeCHHHH
Q 003112 777 RVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGE-LISHREA 815 (846)
Q Consensus 777 kL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGE-VIS~eEA 815 (846)
.|.+......|+||+|.++|++|+.|+.-=-. +||.+.+
T Consensus 94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~lllt~~~a 133 (497)
T 3smt_A 94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPRKLLMTVESA 133 (497)
T ss_dssp TEEEEEETTTEEEEEESSCBCTTCEEEEEEGGGCEEHHHH
T ss_pred ceEEEEcCCCccEEEEcccCCCCCEEEEcCHHHhCcHHhh
Confidence 47777778899999999999999998765433 3455544
No 108
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=26.26 E-value=60 Score=26.70 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=35.9
Q ss_pred hcccccchhhhhHhhhhhcCC------cHHHHHHHHh--hcCCChhHHHHHHHH
Q 003112 204 KKDFVDSEDYILRMTIKEVGL------SDATLESLAQ--CFSRSPSEVKARYEI 249 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~------sd~vl~~l~~--~~~~~~sei~eRy~~ 249 (846)
+-.|++.||.+|...+.++.. ...+...|++ +-..|-....+||..
T Consensus 2 R~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k 55 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLK 55 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHH
Confidence 346999999999999888843 3577887777 444888889999954
No 109
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=26.07 E-value=29 Score=36.74 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=15.0
Q ss_pred CceeeeccccCCCceeE-ee
Q 003112 787 GWGAFLKNSVGKHEYLG-EY 805 (846)
Q Consensus 787 GwGLFA~EdIkKGeFI~-EY 805 (846)
-.++||..+|++|+-|. -|
T Consensus 248 ~i~~~A~rdI~~GeELt~dY 267 (302)
T 1ml9_A 248 DLALFAIKDIPKGTELTFDY 267 (302)
T ss_dssp EEEEEESSCBCTTCEEEECT
T ss_pred EEEEEECCCcCCCCEEEEEE
Confidence 37899999999997654 44
No 110
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=23.15 E-value=34 Score=34.83 Aligned_cols=18 Identities=17% Similarity=0.163 Sum_probs=14.4
Q ss_pred cCceeeeccccCCCceeE
Q 003112 786 SGWGAFLKNSVGKHEYLG 803 (846)
Q Consensus 786 kGwGLFA~EdIkKGeFI~ 803 (846)
.-.++||..+|++|+-|.
T Consensus 188 ~~i~~~A~RdI~~GEELT 205 (232)
T 3ooi_A 188 TRVGLFALSDIKAGTELT 205 (232)
T ss_dssp EEEEEEESSCBCTTCBCE
T ss_pred eEEEEEECCccCCCCEEE
Confidence 457899999999998654
No 111
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=21.56 E-value=51 Score=36.65 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=25.6
Q ss_pred ceEEEEEe-cccCceeeeccccCCCceeEeeeee
Q 003112 776 QRVLLGRS-DVSGWGAFLKNSVGKHEYLGEYTGE 808 (846)
Q Consensus 776 kkL~V~kS-~ikGwGLFA~EdIkKGeFI~EYvGE 808 (846)
.+|.|... ...|+||+|.++|++|+.|+.-=-.
T Consensus 38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~ 71 (449)
T 3qxy_A 38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVPRA 71 (449)
T ss_dssp TTEEEESSSCSSSSEEEESSCBCTTCEEEEEEGG
T ss_pred CceEEEecCCCceEEEEECCCCCCCCEEEEeCcH
Confidence 45777653 4689999999999999988765443
Done!