Query 003112
Match_columns 846
No_of_seqs 302 out of 1107
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 13:43:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003112.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003112hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mvha_ b.85.7.1 (A:) SET doma 99.9 4.8E-22 3.5E-26 205.9 12.8 83 764-846 124-211 (269)
2 d1ml9a_ b.85.7.1 (A:) Dim-5 {F 99.8 1.3E-20 9.7E-25 195.3 8.6 141 687-846 53-211 (284)
3 d2f69a2 b.85.7.1 (A:194-364) H 98.9 3.4E-10 2.5E-14 108.7 6.3 65 775-843 20-86 (171)
4 d2g46a1 b.85.7.2 (A:1-119) Vir 98.2 2.6E-07 1.9E-11 82.6 4.1 59 775-840 3-61 (119)
5 d1ug2a_ a.4.1.3 (A:) 2610100b2 96.1 0.0013 9.6E-08 57.7 3.1 49 204-252 33-82 (95)
6 d2cqra1 a.4.1.3 (A:7-66) DnaJ 95.7 0.0038 2.8E-07 49.7 4.0 49 202-250 10-60 (60)
7 d1guua_ a.4.1.3 (A:) c-Myb, DN 95.3 0.0052 3.8E-07 47.3 3.5 45 204-250 1-46 (50)
8 d1gv2a2 a.4.1.3 (A:144-190) c- 95.0 0.0093 6.7E-07 45.6 4.0 45 204-251 1-46 (47)
9 d2crga1 a.4.1.3 (A:8-64) Metas 95.0 0.013 9.4E-07 46.4 4.9 43 555-598 2-44 (57)
10 d1w0ua_ a.4.1.4 (A:) Telomeric 94.8 0.0098 7.2E-07 46.6 3.7 48 204-253 2-52 (55)
11 d2iw5b1 a.4.1.3 (B:376-440) RE 93.7 0.047 3.4E-06 43.6 5.6 44 554-599 5-48 (65)
12 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 93.1 0.035 2.5E-06 44.2 4.0 43 206-251 4-47 (65)
13 d2cjja1 a.4.1.3 (A:8-70) Radia 93.1 0.031 2.2E-06 44.7 3.5 48 206-253 3-52 (63)
14 d1gvda_ a.4.1.3 (A:) c-Myb, DN 92.8 0.033 2.4E-06 43.2 3.3 45 204-250 3-48 (52)
15 d1xc5a1 a.4.1.3 (A:413-480) Nu 92.1 0.064 4.7E-06 43.2 4.3 43 554-598 17-59 (68)
16 d1x41a1 a.4.1.1 (A:8-54) Trans 91.5 0.064 4.7E-06 40.6 3.4 41 207-249 4-45 (47)
17 d1w0ta_ a.4.1.4 (A:) DNA-bindi 90.7 0.098 7.1E-06 40.3 3.9 47 204-252 2-51 (52)
18 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 89.3 0.27 2E-05 38.8 5.6 37 555-593 3-39 (65)
19 d1igna1 a.4.1.6 (A:360-445) DN 88.4 0.11 8.3E-06 44.1 2.8 48 204-251 1-52 (86)
20 d2iw5b1 a.4.1.3 (B:376-440) RE 87.9 0.2 1.5E-05 39.8 3.9 44 206-252 7-51 (65)
21 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 87.6 0.21 1.5E-05 39.9 3.7 48 206-253 3-51 (59)
22 d1xc5a1 a.4.1.3 (A:413-480) Nu 83.3 0.33 2.4E-05 38.9 3.0 46 205-253 18-64 (68)
23 d1x41a1 a.4.1.1 (A:8-54) Trans 82.3 1.2 8.6E-05 33.4 5.7 42 555-598 2-44 (47)
24 d1gvda_ a.4.1.3 (A:) c-Myb, DN 74.5 2 0.00015 32.7 4.9 43 554-598 3-46 (52)
25 d2ckxa1 a.4.1.3 (A:578-660) Te 65.3 2.6 0.00019 34.9 4.0 47 206-252 2-51 (83)
26 d1guua_ a.4.1.3 (A:) c-Myb, DN 61.6 5.9 0.00043 29.5 5.1 40 555-596 2-42 (50)
27 d1ml9a_ b.85.7.1 (A:) Dim-5 {F 60.4 1.4 0.00011 43.5 1.7 17 788-804 241-257 (284)
28 d2h2ja2 b.85.7.3 (A:50-310) Ru 58.4 2.4 0.00017 39.8 2.8 33 782-814 27-60 (261)
29 d1w0ta_ a.4.1.4 (A:) DNA-bindi 55.6 8.9 0.00065 28.8 5.2 43 555-597 3-49 (52)
30 d1ofcx2 a.4.1.13 (X:851-978) S 52.8 5.7 0.00042 35.7 4.3 48 204-251 49-110 (128)
31 d1gv2a2 a.4.1.3 (A:144-190) c- 52.2 8.7 0.00063 28.4 4.6 38 555-594 2-39 (47)
32 d2cqra1 a.4.1.3 (A:7-66) DnaJ 52.1 8.5 0.00062 29.5 4.7 42 552-595 10-55 (60)
33 d2cjja1 a.4.1.3 (A:8-70) Radia 52.1 10 0.00075 29.3 5.2 39 555-595 2-44 (63)
34 d1irza_ a.4.1.11 (A:) Arr10-B 38.5 27 0.0019 27.6 5.7 48 555-602 8-58 (64)
35 d1mvha_ b.85.7.1 (A:) SET doma 35.3 21 0.0016 34.7 5.8 23 727-751 106-128 (269)
36 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 34.8 35 0.0026 26.5 5.8 44 555-601 2-49 (59)
37 d1w0ua_ a.4.1.4 (A:) Telomeric 33.6 32 0.0024 25.8 5.3 29 555-583 3-32 (55)
38 d1rjuv_ g.46.1.1 (V:) Metallot 30.9 17 0.0012 25.3 2.9 10 696-705 14-23 (36)
39 d2ckxa1 a.4.1.3 (A:578-660) Te 28.7 38 0.0028 27.4 5.3 43 555-597 1-46 (83)
40 d4mt2a_ g.46.1.1 (A:) Metallot 26.9 63 0.0046 25.1 5.9 43 673-719 7-52 (61)
41 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 23.6 29 0.0021 27.0 3.4 47 205-251 3-58 (59)
42 d1ofcx1 a.4.1.3 (X:799-850) SA 20.8 41 0.003 25.6 3.7 41 556-598 1-42 (52)
43 d2ev0a2 a.76.1.1 (A:63-136) Ma 20.8 24 0.0018 28.1 2.5 32 221-252 40-73 (74)
No 1
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.86 E-value=4.8e-22 Score=205.88 Aligned_cols=83 Identities=29% Similarity=0.444 Sum_probs=80.0
Q ss_pred cccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcC-----CccE
Q 003112 764 ECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLN-----DQAT 838 (846)
Q Consensus 764 ~C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln-----~~~V 838 (846)
.|.||++|+|...+|+|++|..+||||||.++|++|+||+||+||||+.+|+++|.+.|+..+.+|+|.|. ..++
T Consensus 124 ~C~Nr~~q~g~~~~leV~~t~~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~~~~~~~~~~l~~~~~~~~~~ 203 (269)
T d1mvha_ 124 ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYT 203 (269)
T ss_dssp TCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCEE
T ss_pred CCCCeecCCCCccCEEEEEcCCCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHhhcCCcchhheecccccccce
Confidence 79999999999999999999999999999999999999999999999999999999999999999999985 4799
Q ss_pred EccccCCC
Q 003112 839 YIAHLYFD 846 (846)
Q Consensus 839 IDATrKGN 846 (846)
|||++.||
T Consensus 204 iDa~~~GN 211 (269)
T d1mvha_ 204 VDAQNYGD 211 (269)
T ss_dssp EECSSEEC
T ss_pred eeeeecCc
Confidence 99999998
No 2
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}
Probab=99.80 E-value=1.3e-20 Score=195.34 Aligned_cols=141 Identities=21% Similarity=0.309 Sum_probs=99.1
Q ss_pred CCCcccCCCcccccCCCCCccccccCCCcccCC-CCccC-CCCccccccCccCCCCCcCCcccCCCCCCCCCCCCCCccc
Q 003112 687 KQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAK-SQCRS-RQCPCFAADRECDPDVCRNCWISCGDGSLGVPDQKGDNYE 764 (846)
Q Consensus 687 ~~C~C~~~g~~CEk~C~C~~~C~nRF~GC~C~~-~qC~t-~~CpC~~a~rECDPdlC~~C~~sCgd~~~~~P~~~~~~~~ 764 (846)
..|+|+.....+...|.|......+|+...... ..+.. ....+.....||.+ .|. |+ ..
T Consensus 53 ~~C~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~EC~~-~C~-C~-----------------~~ 113 (284)
T d1ml9a_ 53 STCQCLDEMAPDSDEEADPYTRKKRFAYYSQGAKKGLLRDRVLQSQEPIYECHQ-GCA-CS-----------------KD 113 (284)
T ss_dssp TTSGGGTTSCCC-----------CCSSBBCSSTTBTSBCHHHHHHCCCEECCCT-TCS-SC-----------------TT
T ss_pred CCCcChhhcCccccccccccccccccccccccccccccccccccCCCceeCCCC-CCC-cC-----------------CC
Confidence 567887766556666666655555554322211 11211 12333444678986 565 52 27
Q ss_pred ccchHHhhcccceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccC--CCeEEEEcCC-------
Q 003112 765 CRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRE--NSSFLFNLND------- 835 (846)
Q Consensus 765 C~Nr~lQrg~~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~--~~sYLF~Ln~------- 835 (846)
|.||++|+|...+|+|+++..+||||||.++|+||+||+||+||||+.+||++|...|... .+.|+|.|+.
T Consensus 114 C~Nr~~q~g~~~~lev~kt~~kG~Gv~a~~~I~kGt~I~eY~Gevi~~~ea~~~~~~~~~~~~~~~y~~~l~~~~~~~~~ 193 (284)
T d1ml9a_ 114 CPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPDSL 193 (284)
T ss_dssp CTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSSS
T ss_pred CCCeeccCCCccCEEEEEcCCCceEEeeCCCcCCCCEEEEecCcccCHHHHHHHHHHHHhhccCCccceecccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999777544 4679999863
Q ss_pred -------ccEEccccCCC
Q 003112 836 -------QATYIAHLYFD 846 (846)
Q Consensus 836 -------~~VIDATrKGN 846 (846)
.++|||+++||
T Consensus 194 ~~~~~~~~~~iDa~~~GN 211 (284)
T d1ml9a_ 194 DPLLAGQPLEVDGEYMSG 211 (284)
T ss_dssp CHHHHSCCCEEECSSEEC
T ss_pred cccccCCceeEeeeeccc
Confidence 46999999997
No 3
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94 E-value=3.4e-10 Score=108.65 Aligned_cols=65 Identities=26% Similarity=0.381 Sum_probs=57.1
Q ss_pred cceEEEEEecc--cCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcCCccEEcccc
Q 003112 775 QQRVLLGRSDV--SGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQATYIAHL 843 (846)
Q Consensus 775 ~kkL~V~kS~i--kGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln~~~VIDATr 843 (846)
..+|.|++|.+ +||||||+++|++|++|+||.|++|+..|+++|...+ ..|+|.|++.+++|+..
T Consensus 20 ~~~v~v~~S~Ip~~G~GlFA~~~I~kG~~I~~Y~G~~i~~~e~~~~~~~~----~~y~~~l~~~~~~d~~~ 86 (171)
T d2f69a2 20 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWAL----NGNTLSLDEETVIDVPE 86 (171)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGG----CSSCEECSSSCEEECCT
T ss_pred cceEEEEeeccCCCceehccCcccCCCCEEEEeeeEEECHHHHhhhhhhc----cccEEEeccceeecCCc
Confidence 35699999987 5999999999999999999999999999999987654 46899998888888764
No 4
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]}
Probab=98.24 E-value=2.6e-07 Score=82.59 Aligned_cols=59 Identities=20% Similarity=0.368 Sum_probs=49.9
Q ss_pred cceEEEEEecccCceeeeccccCCCceeEeeeeeeeCHHHHHHHhhhcccCCCeEEEEcCCccEEc
Q 003112 775 QQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQATYI 840 (846)
Q Consensus 775 ~kkL~V~kS~ikGwGLFA~EdIkKGeFI~EYvGEVIS~eEAdRRgk~Yd~~~~sYLF~Ln~~~VID 840 (846)
.++|.|.+|.++||||||.++|++|++|++|.|++++..+...+.. .|+|.+++..+++
T Consensus 3 ~~~v~v~~s~~~G~GvfA~~~i~~g~~i~~~~g~~~~~~~~~~~~~-------~y~~~~~~~~~~~ 61 (119)
T d2g46a1 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALE-------DYLFSRKNMSAMA 61 (119)
T ss_dssp CSSCEECCCSSCSSCEEECSCBCTTCCCEEEECEEECSTHHHHHTC-------SSEEEETTEEEEC
T ss_pred cCcEEEEEcCCCceEEEECchhhCCCEEecccEEEecHHHHhhhhh-------ceeeeccccccee
Confidence 3578999999999999999999999999999999999988877643 4677777655554
No 5
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.11 E-value=0.0013 Score=57.71 Aligned_cols=49 Identities=20% Similarity=0.322 Sum_probs=44.1
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSK 252 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~ 252 (846)
.--.+..||++|-...|++|..++.|..|+++|+ +++.+|++||..|.+
T Consensus 33 ~~~WTrEEDriIL~~~q~~G~~~~tw~~Ia~~L~~Rs~~qvr~Rf~~Lm~ 82 (95)
T d1ug2a_ 33 VVLWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQ 82 (95)
T ss_dssp CSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHHHHHcCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3446777999999999999999999999999995 999999999999984
No 6
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.72 E-value=0.0038 Score=49.68 Aligned_cols=49 Identities=16% Similarity=0.476 Sum_probs=42.6
Q ss_pred hhhcccccchhhhhHhhhhhcCCcHH-HHHHHHhhcC-CChhHHHHHHHHh
Q 003112 202 EEKKDFVDSEDYILRMTIKEVGLSDA-TLESLAQCFS-RSPSEVKARYEIL 250 (846)
Q Consensus 202 e~k~~f~e~eD~~~~~~~~e~g~sd~-vl~~l~~~~~-~~~sei~eRy~~L 250 (846)
..+..++..||.+|..++++||..+. --..||++|+ +|+.++.+||+.|
T Consensus 10 ~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~~Rt~~qc~~R~~~L 60 (60)
T d2cqra1 10 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLL 60 (60)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 44567999999999999999998754 3789999995 9999999999987
No 7
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.35 E-value=0.0052 Score=47.33 Aligned_cols=45 Identities=20% Similarity=0.392 Sum_probs=39.7
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEIL 250 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L 250 (846)
|..|+..||.+|...+++||... ...||++|+ +|+.++++||...
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~ 46 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNGTDD--WKVIANYLPNRTDVQCQHRWQKV 46 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSC--HHHHHHTSTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHCCCCHHHHHHHHHhh
Confidence 45699999999999999999754 888999995 9999999999874
No 8
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.01 E-value=0.0093 Score=45.60 Aligned_cols=45 Identities=20% Similarity=0.361 Sum_probs=39.9
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
|..|++.||.+|-...++||.. ...||++|+ +|..+|+.||..+.
T Consensus 1 K~~WT~eED~~L~~~v~~~G~~---W~~Ia~~~~gRt~~~~knr~~~~l 46 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTM 46 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSC---HHHHHTTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHhhH---HHHHHhHcCCCCHHHHHHHHHHHc
Confidence 4568999999999999999974 788999995 99999999998874
No 9
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.98 E-value=0.013 Score=46.42 Aligned_cols=43 Identities=23% Similarity=0.502 Sum_probs=38.5
Q ss_pred CCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
..||+-|..+|..++..||+|.-.||+.++ ++||..||-+|-.
T Consensus 2 d~WT~eE~~~F~~~~~~yGKdf~~I~~~~v-~~Ks~~~~v~fYY 44 (57)
T d2crga1 2 EEWSASEACLFEEALEKYGKDFNDIRQDFL-PWKSLTSIIEYYY 44 (57)
T ss_dssp CCCCHHHHHHHHHHHHHTCSCHHHHHHTTC-SSSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcccHHHHHHHHc-CCCCHHHHHHHHH
Confidence 479999999999999999999999998654 6899999988765
No 10
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.80 E-value=0.0098 Score=46.64 Aligned_cols=48 Identities=13% Similarity=0.324 Sum_probs=39.4
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHh---hcCCChhHHHHHHHHhhhc
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQ---CFSRSPSEVKARYEILSKE 253 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~---~~~~~~sei~eRy~~L~~~ 253 (846)
|+.|++.||..|...+++||... -..|++ +.++++.+|++||++|.+.
T Consensus 2 r~~WT~eEd~~L~~~V~~~G~~~--W~~I~~~~~~~~Rt~~q~k~Rwrn~~k~ 52 (55)
T d1w0ua_ 2 KQKWTVEESEWVKAGVQKYGEGN--WAAISKNYPFVNRTAVMIKDRWRTMKRL 52 (55)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTC--HHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCh--HHHHHhhcCCCCcCHHHHHHHHHHHhcC
Confidence 57899999999999999999753 445554 3369999999999999854
No 11
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.67 E-value=0.047 Score=43.63 Aligned_cols=44 Identities=23% Similarity=0.365 Sum_probs=39.8
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHHh
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMTC 599 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~~ 599 (846)
...||+.|..+|..++..||.+.=.||..| ++||..+|-.|...
T Consensus 5 ~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~--~~kt~~q~~~~y~~ 48 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 48 (65)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCchHHHHHHHc--CCCCHHHHHHHHHH
Confidence 356999999999999999999999999987 78999999887764
No 12
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.13 E-value=0.035 Score=44.22 Aligned_cols=43 Identities=12% Similarity=0.164 Sum_probs=38.3
Q ss_pred ccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 206 DFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 206 ~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
.|+..||.+|..+++.||. -+..||++|+ +|+.+|+.||..+.
T Consensus 4 ~WT~eEd~~l~~~~~~~G~---~W~~Ia~~~~~Rt~~q~k~ry~~~~ 47 (65)
T d2cu7a1 4 KWTIEEKELFEQGLAKFGR---RWTKISKLIGSRTVLQVKSYARQYF 47 (65)
T ss_dssp CCCHHHHHHHHHHHHHTCS---CHHHHHHHHSSSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcc---hHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 4788899999999999995 3889999996 99999999998765
No 13
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=93.05 E-value=0.031 Score=44.67 Aligned_cols=48 Identities=23% Similarity=0.395 Sum_probs=40.5
Q ss_pred ccccchhhhhHhhhhhcCCcH-HHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 206 DFVDSEDYILRMTIKEVGLSD-ATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 206 ~f~e~eD~~~~~~~~e~g~sd-~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
..+..||.+|..+++.||... .-...||++|+ +|+.|+++||+.|.++
T Consensus 3 ~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~gRt~~qc~~r~~~L~~d 52 (63)
T d2cjja1 3 PWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 52 (63)
T ss_dssp SCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 356779999999999998753 34789999996 9999999999999743
No 14
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.84 E-value=0.033 Score=43.17 Aligned_cols=45 Identities=18% Similarity=0.253 Sum_probs=39.2
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEIL 250 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L 250 (846)
|.-|+..||.+|...+++||... -..||++|+ +|+.++++||...
T Consensus 3 rg~WT~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qc~~Rw~~~ 48 (52)
T d1gvda_ 3 KGPWTKEEDQRLIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNH 48 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTC--HHHHHTTSTTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHCCCCHHHHHHHHHhh
Confidence 45689999999999999999754 788999995 9999999999863
No 15
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.07 E-value=0.064 Score=43.22 Aligned_cols=43 Identities=30% Similarity=0.276 Sum_probs=38.6
Q ss_pred CCCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
...||+-|..+|..++..||.|.=.||+.| +.+|..||-+|..
T Consensus 17 ~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~--~~rt~~q~~~~yy 59 (68)
T d1xc5a1 17 MNMWSEQEKETFREKFMQHPKNFGLIASFL--ERKTVAECVLYYY 59 (68)
T ss_dssp TTCCCTTTHHHHHHHHHHTTSCSSSHHHHT--TTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCcHHHHHHHc--CCCCHHHHHHHHH
Confidence 467999999999999999999999999966 7799999987765
No 16
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.49 E-value=0.064 Score=40.63 Aligned_cols=41 Identities=15% Similarity=0.351 Sum_probs=36.1
Q ss_pred cccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHH
Q 003112 207 FVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEI 249 (846)
Q Consensus 207 f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~ 249 (846)
+++.||.+|-.+++.||..+ ...||++|+ +|+.++++||..
T Consensus 4 Wt~eEd~~L~~~v~~~G~~n--W~~Ia~~~~~Rt~~Qcr~r~~~ 45 (47)
T d1x41a1 4 WTAQEEMALLEAVMDCGFGN--WQDVANQMCTKTKEECEKHYMK 45 (47)
T ss_dssp SCHHHHHHHHHHHHHTCTTC--HHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCcc--HHHHHHHcCCCCHHHHHHHHHH
Confidence 67789999999999999764 778888997 999999999975
No 17
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.73 E-value=0.098 Score=40.33 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=37.3
Q ss_pred hcccccchhhhhHhhhhhcCCcHHHHHHHHhh---cCCChhHHHHHHHHhhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLSDATLESLAQC---FSRSPSEVKARYEILSK 252 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~---~~~~~sei~eRy~~L~~ 252 (846)
+..|++.||..|...+++||... -..|+.. .++|+.+++.||.+|++
T Consensus 2 r~~WT~eED~~L~~~v~~~G~~~--W~~I~~~~~~~~Rt~~q~r~Rw~nl~K 51 (52)
T d1w0ta_ 2 RQAWLWEEDKNLRSGVRKYGEGN--WSKILLHYKFNNRTSVMLKDRWRTMKK 51 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTC--HHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC--HHHHHhhcCCCCCCHHHHHHHHHHHHC
Confidence 45689999999999999999853 2334443 36999999999999974
No 18
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.33 E-value=0.27 Score=38.81 Aligned_cols=37 Identities=35% Similarity=0.643 Sum_probs=32.5
Q ss_pred CCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEV 593 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV 593 (846)
..||+-|-.+|+.++..||.|...||..| +.+|=.+|
T Consensus 3 ~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~--~~Rt~~q~ 39 (65)
T d2cu7a1 3 VKWTIEEKELFEQGLAKFGRRWTKISKLI--GSRTVLQV 39 (65)
T ss_dssp CCCCHHHHHHHHHHHHHTCSCHHHHHHHH--SSSCHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcchHHHHHHHc--CCCCHHHH
Confidence 56999999999999999999999999976 67885555
No 19
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.44 E-value=0.11 Score=44.08 Aligned_cols=48 Identities=13% Similarity=0.337 Sum_probs=41.1
Q ss_pred hcccccchhhhhHhhhhhcCC---cHHHHHHHHhhcC-CChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGL---SDATLESLAQCFS-RSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~---sd~vl~~l~~~~~-~~~sei~eRy~~L~ 251 (846)
|.-|+..||.+|...++.||. +..-...||++|+ +|.-++++||...-
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lpgRt~~qcr~Rw~~~L 52 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYL 52 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcCCCCHHHHHHHHHHHc
Confidence 456899999999999999986 3567889999996 99999999998644
No 20
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.93 E-value=0.2 Score=39.75 Aligned_cols=44 Identities=14% Similarity=0.302 Sum_probs=39.5
Q ss_pred ccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhh
Q 003112 206 DFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSK 252 (846)
Q Consensus 206 ~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~ 252 (846)
.+++.||.++-..+..||-+ +..||++|+ .|+.+|..||..+++
T Consensus 7 ~WT~eE~~~f~~~~~~~G~~---w~~Ia~~~~~kt~~q~~~~y~~~~k 51 (65)
T d2iw5b1 7 RWTTEEQLLAVQAIRKYGRD---FQAISDVIGNKSVVQVKNFFVNYRR 51 (65)
T ss_dssp SCCHHHHHHHHHHHHHHSSC---HHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHhCch---HHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 47888999999999999965 999999997 999999999998873
No 21
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.58 E-value=0.21 Score=39.88 Aligned_cols=48 Identities=15% Similarity=0.222 Sum_probs=39.9
Q ss_pred ccccchhhhhHhhhhhcCC-cHHHHHHHHhhcCCChhHHHHHHHHhhhc
Q 003112 206 DFVDSEDYILRMTIKEVGL-SDATLESLAQCFSRSPSEVKARYEILSKE 253 (846)
Q Consensus 206 ~f~e~eD~~~~~~~~e~g~-sd~vl~~l~~~~~~~~sei~eRy~~L~~~ 253 (846)
+.++.|+.+|-.++..|-. +..=.+.||++||+++.|+..||+.|++.
T Consensus 3 eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~vgkt~~ev~~~~k~l~e~ 51 (59)
T d2cqqa1 3 EWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDS 51 (59)
T ss_dssp CCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 4677789999999998822 23568899999999999999999999955
No 22
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.26 E-value=0.33 Score=38.86 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=40.1
Q ss_pred cccccchhhhhHhhhhhcCCcHHHHHHHHhhcC-CChhHHHHHHHHhhhc
Q 003112 205 KDFVDSEDYILRMTIKEVGLSDATLESLAQCFS-RSPSEVKARYEILSKE 253 (846)
Q Consensus 205 ~~f~e~eD~~~~~~~~e~g~sd~vl~~l~~~~~-~~~sei~eRy~~L~~~ 253 (846)
..+++.||.++-.+++.||-. +..||++|+ +|..+|.++|-..++.
T Consensus 18 ~~WT~eE~~~f~~~~~~~G~~---w~~Ia~~~~~rt~~q~~~~yy~~kk~ 64 (68)
T d1xc5a1 18 NMWSEQEKETFREKFMQHPKN---FGLIASFLERKTVAECVLYYYLTKKN 64 (68)
T ss_dssp TCCCTTTHHHHHHHHHHTTSC---SSSHHHHTTTSCHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHCCc---HHHHHHHcCCCCHHHHHHHHHHHHCc
Confidence 458999999999999999954 889999996 9999999999877643
No 23
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.33 E-value=1.2 Score=33.35 Aligned_cols=42 Identities=24% Similarity=0.094 Sum_probs=35.6
Q ss_pred CCcchhhHHHHHHHHHhhCC-cchHHHHHhhCCCCcHHHHHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFGR-NSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~-NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
.+||..|-.+|+.++..||. |-=.||..| +.||=.|+-.+..
T Consensus 2 ~~Wt~eEd~~L~~~v~~~G~~nW~~Ia~~~--~~Rt~~Qcr~r~~ 44 (47)
T d1x41a1 2 PSWTAQEEMALLEAVMDCGFGNWQDVANQM--CTKTKEECEKHYM 44 (47)
T ss_dssp SSSCHHHHHHHHHHHHHTCTTCHHHHHHHH--TTSCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCccHHHHHHHc--CCCCHHHHHHHHH
Confidence 46999999999999999995 789999977 7799888875543
No 24
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.49 E-value=2 Score=32.65 Aligned_cols=43 Identities=19% Similarity=0.226 Sum_probs=37.0
Q ss_pred CCCcchhhHHHHHHHHHhhC-CcchHHHHHhhCCCCcHHHHHHHHH
Q 003112 554 EKSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 554 ~~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
...||+.|-.++..++..|| .|--.||..| +.+|-.|+..+..
T Consensus 3 rg~WT~eED~~L~~~v~~~g~~~W~~Ia~~l--~~Rt~~qc~~Rw~ 46 (52)
T d1gvda_ 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL--KGRIGKQCRERWH 46 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS--TTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH--CCCCHHHHHHHHH
Confidence 35799999999999999999 5899999977 7799988876544
No 25
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=65.35 E-value=2.6 Score=34.86 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=34.9
Q ss_pred ccccchhhhhHhhhhhcCCc--HHHHHHHH-hhcCCChhHHHHHHHHhhh
Q 003112 206 DFVDSEDYILRMTIKEVGLS--DATLESLA-QCFSRSPSEVKARYEILSK 252 (846)
Q Consensus 206 ~f~e~eD~~~~~~~~e~g~s--d~vl~~l~-~~~~~~~sei~eRy~~L~~ 252 (846)
-|+..||.+|...+++||.. .+|..... .+-++|+.+++.||.+|.+
T Consensus 2 ~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~ 51 (83)
T d2ckxa1 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVH 51 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHHHHHhh
Confidence 47888999999999999974 23322211 1335999999999999774
No 26
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.59 E-value=5.9 Score=29.54 Aligned_cols=40 Identities=25% Similarity=0.190 Sum_probs=32.7
Q ss_pred CCcchhhHHHHHHHHHhhC-CcchHHHHHhhCCCCcHHHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFG-RNSCLIARNLLNGLKTCWEVFQY 596 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg-~NsClIAr~Ll~g~KtC~EV~~~ 596 (846)
..||..|-.+++.++..|| .|--.||..| +.+|=.|+-..
T Consensus 2 ~~WT~eED~~L~~~v~~~g~~~W~~Ia~~~--~~Rt~~qcr~R 42 (50)
T d1guua_ 2 TRWTREEDEKLKKLVEQNGTDDWKVIANYL--PNRTDVQCQHR 42 (50)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHTS--TTCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHH--CCCCHHHHHHH
Confidence 4699999999999999999 5899999966 55776666533
No 27
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}
Probab=60.43 E-value=1.4 Score=43.55 Aligned_cols=17 Identities=18% Similarity=0.063 Sum_probs=14.4
Q ss_pred ceeeeccccCCCceeEe
Q 003112 788 WGAFLKNSVGKHEYLGE 804 (846)
Q Consensus 788 wGLFA~EdIkKGeFI~E 804 (846)
.++||..+|++||-|.-
T Consensus 241 i~~~A~rdI~~GEELt~ 257 (284)
T d1ml9a_ 241 LALFAIKDIPKGTELTF 257 (284)
T ss_dssp EEEEESSCBCTTCEEEE
T ss_pred EEEEECCccCCCCEEEE
Confidence 57899999999997763
No 28
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=58.38 E-value=2.4 Score=39.83 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=23.8
Q ss_pred EecccCceeeeccccCCCceeEee-eeeeeCHHH
Q 003112 782 RSDVSGWGAFLKNSVGKHEYLGEY-TGELISHRE 814 (846)
Q Consensus 782 kS~ikGwGLFA~EdIkKGeFI~EY-vGEVIS~eE 814 (846)
...++|.||||.++|++|+.|+.= ..-+|+.+.
T Consensus 27 ~~~~~GrGl~AtrdI~~Ge~il~vP~~~~lt~~~ 60 (261)
T d2h2ja2 27 SVVTEGLGLVALKDISRNDVILQVPKRLWINPDA 60 (261)
T ss_dssp EEETTEEEEECSSCCCTTCEEEEEEGGGCCSHHH
T ss_pred cCCCceeEEEECCcCCCCCEEEEeChHHhccHHH
Confidence 345689999999999999999862 122455543
No 29
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.57 E-value=8.9 Score=28.81 Aligned_cols=43 Identities=21% Similarity=0.247 Sum_probs=32.3
Q ss_pred CCcchhhHHHHHHHHHhhCC-cchHHHHHhhCCCCc---HHHHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFGR-NSCLIARNLLNGLKT---CWEVFQYM 597 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~-NsClIAr~Ll~g~Kt---C~EV~~~m 597 (846)
.+||+.|-.++..++..||. +=..||..+-...+| |.+=|.-|
T Consensus 3 ~~WT~eED~~L~~~v~~~G~~~W~~I~~~~~~~~Rt~~q~r~Rw~nl 49 (52)
T d1w0ta_ 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTM 49 (52)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHhhcCCCCCCHHHHHHHHHHH
Confidence 57999999999999999996 889999865223355 55544433
No 30
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=52.77 E-value=5.7 Score=35.70 Aligned_cols=48 Identities=21% Similarity=0.358 Sum_probs=36.4
Q ss_pred hcccccchhhhhHhhhhhcCCc-----HHHHHHHHh---------hcCCChhHHHHHHHHhh
Q 003112 204 KKDFVDSEDYILRMTIKEVGLS-----DATLESLAQ---------CFSRSPSEVKARYEILS 251 (846)
Q Consensus 204 k~~f~e~eD~~~~~~~~e~g~s-----d~vl~~l~~---------~~~~~~sei~eRy~~L~ 251 (846)
++.|++.||++|=..+-++|+. |+|-..|.. |-++|+.||+.|...|-
T Consensus 49 ~k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~~Ir~~p~FrFDwf~kSRt~~el~rR~~tLi 110 (128)
T d1ofcx2 49 GKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLI 110 (128)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhcCCCccHHHHHHHHHHhCcchhhhhHhccCCHHHHHHHHHHHH
Confidence 4568999999999888889984 344443432 23499999999999886
No 31
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.22 E-value=8.7 Score=28.44 Aligned_cols=38 Identities=21% Similarity=0.200 Sum_probs=31.8
Q ss_pred CCcchhhHHHHHHHHHhhCCcchHHHHHhhCCCCcHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFGRNSCLIARNLLNGLKTCWEVF 594 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~NsClIAr~Ll~g~KtC~EV~ 594 (846)
.+||.-|-.++..++..||.+=-.||..| ..+|=.+|=
T Consensus 2 ~~WT~eED~~L~~~v~~~G~~W~~Ia~~~--~gRt~~~~k 39 (47)
T d1gv2a2 2 TSWTEEEDRIIYQAHKRLGNRWAEIAKLL--PGRTDNAIK 39 (47)
T ss_dssp CCCCHHHHHHHHHHHHHHSSCHHHHHTTC--TTCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhhHHHHHHhHc--CCCCHHHHH
Confidence 57999999999999999999999999865 447655553
No 32
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.14 E-value=8.5 Score=29.51 Aligned_cols=42 Identities=21% Similarity=0.302 Sum_probs=33.1
Q ss_pred CCCCCcchhhHHHHHHHHHhhCCc----chHHHHHhhCCCCcHHHHHH
Q 003112 552 SDEKSWKTIEKGLFDKGVEIFGRN----SCLIARNLLNGLKTCWEVFQ 595 (846)
Q Consensus 552 ~~~~~Wt~~E~~L~~k~~eifg~N----sClIAr~Ll~g~KtC~EV~~ 595 (846)
.....||.-|-.+|+.++..||.+ --.||..| +.+|=.|+..
T Consensus 10 ~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l--~~Rt~~qc~~ 55 (60)
T d2cqra1 10 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCV--PSKSKEDCIA 55 (60)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGC--SSSCHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHc--CCCCHHHHHH
Confidence 345679999999999999999974 57899866 5677555543
No 33
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=52.10 E-value=10 Score=29.33 Aligned_cols=39 Identities=21% Similarity=0.425 Sum_probs=31.0
Q ss_pred CCcchhhHHHHHHHHHhhCCc----chHHHHHhhCCCCcHHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFGRN----SCLIARNLLNGLKTCWEVFQ 595 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~N----sClIAr~Ll~g~KtC~EV~~ 595 (846)
+.||+-|-.+|..++..||.+ -=.||..| +.||=.|+-.
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l--~gRt~~qc~~ 44 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAV--EGRTPEEVKK 44 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHS--TTCCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHc--CCCCHHHHHH
Confidence 579999999999999999985 36788866 5677555543
No 34
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=38.55 E-value=27 Score=27.65 Aligned_cols=48 Identities=15% Similarity=-0.015 Sum_probs=39.2
Q ss_pred CCcchhhHHHHHHHHHhhCCcc---hHHHHHhhCCCCcHHHHHHHHHhhhh
Q 003112 555 KSWKTIEKGLFDKGVEIFGRNS---CLIARNLLNGLKTCWEVFQYMTCSEN 602 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~Ns---ClIAr~Ll~g~KtC~EV~~~m~~~~~ 602 (846)
--||+-|-..|..+++.||..- -.|...+-....|-.+|-.++++...
T Consensus 8 ~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKYrl 58 (64)
T d1irza_ 8 VLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRV 58 (64)
T ss_dssp CSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHHHH
Confidence 4599999999999999999864 67877764455799999999987654
No 35
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=35.33 E-value=21 Score=34.74 Aligned_cols=23 Identities=26% Similarity=0.610 Sum_probs=15.6
Q ss_pred CccccccCccCCCCCcCCcccCCCC
Q 003112 727 CPCFAADRECDPDVCRNCWISCGDG 751 (846)
Q Consensus 727 CpC~~a~rECDPdlC~~C~~sCgd~ 751 (846)
|......+||++ .|. |+..|...
T Consensus 106 ~~~~~~i~EC~~-~C~-C~~~C~Nr 128 (269)
T d1mvha_ 106 ADTGAVIYECNS-FCS-CSMECPNR 128 (269)
T ss_dssp TTCCSEEECCCT-TSC-SCTTCTTC
T ss_pred cCcCCeEEECCC-CCC-CCCCCCCe
Confidence 333446689986 686 88888654
No 36
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.83 E-value=35 Score=26.49 Aligned_cols=44 Identities=16% Similarity=0.204 Sum_probs=35.6
Q ss_pred CCcchhhHHHHHHHHHhhCCc----chHHHHHhhCCCCcHHHHHHHHHhhh
Q 003112 555 KSWKTIEKGLFDKGVEIFGRN----SCLIARNLLNGLKTCWEVFQYMTCSE 601 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~N----sClIAr~Ll~g~KtC~EV~~~m~~~~ 601 (846)
.+||..|..+|.+++..|... -=.||..| | ||=.||..+.....
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~v--g-kt~~ev~~~~k~l~ 49 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--G-RSVTDVTTKAKQLK 49 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--T-SCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHH--C-CCHHHHHHHHHHHH
Confidence 579999999999999999864 36788877 4 88888887766543
No 37
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.55 E-value=32 Score=25.77 Aligned_cols=29 Identities=28% Similarity=0.560 Sum_probs=26.0
Q ss_pred CCcchhhHHHHHHHHHhhCC-cchHHHHHh
Q 003112 555 KSWKTIEKGLFDKGVEIFGR-NSCLIARNL 583 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~-NsClIAr~L 583 (846)
..||+.|-.+++.++..||. +=-.||+.+
T Consensus 3 ~~WT~eEd~~L~~~V~~~G~~~W~~I~~~~ 32 (55)
T d1w0ua_ 3 QKWTVEESEWVKAGVQKYGEGNWAAISKNY 32 (55)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHhCCChHHHHHhhc
Confidence 57999999999999999995 889999863
No 38
>d1rjuv_ g.46.1.1 (V:) Metallothionein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.91 E-value=17 Score=25.34 Aligned_cols=10 Identities=50% Similarity=1.431 Sum_probs=5.1
Q ss_pred cccccCCCCC
Q 003112 696 TCCEKYCGCP 705 (846)
Q Consensus 696 ~~CEk~C~C~ 705 (846)
.-|.|.|.|+
T Consensus 14 eqcqkscscp 23 (36)
T d1rjuv_ 14 EQCQKSCSCP 23 (36)
T ss_dssp GGGTTSCCSC
T ss_pred HHHhhcCCCC
Confidence 3455555554
No 39
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=28.70 E-value=38 Score=27.39 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=32.6
Q ss_pred CCcchhhHHHHHHHHHhhCC-cchHHHHHhh--CCCCcHHHHHHHH
Q 003112 555 KSWKTIEKGLFDKGVEIFGR-NSCLIARNLL--NGLKTCWEVFQYM 597 (846)
Q Consensus 555 ~~Wt~~E~~L~~k~~eifg~-NsClIAr~Ll--~g~KtC~EV~~~m 597 (846)
.+||.-|-.++..+++.||. |-..||+.+. ...+|-.++....
T Consensus 1 r~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RW 46 (83)
T d2ckxa1 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKW 46 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHH
Confidence 37999999999999999996 8999998531 1236666665443
No 40
>d4mt2a_ g.46.1.1 (A:) Metallothionein {Rat (Rattus rattus) [TaxId: 10117]}
Probab=26.86 E-value=63 Score=25.14 Aligned_cols=43 Identities=40% Similarity=1.142 Sum_probs=26.9
Q ss_pred CCCCCCCCCCCCCC-CCCcccCCCcccccCCC--CCccccccCCCcccCC
Q 003112 673 CRQYNPCGCQTACG-KQCPCLLNGTCCEKYCG--CPKSCKNRFRGCHCAK 719 (846)
Q Consensus 673 ~~~y~PC~h~gpC~-~~C~C~~~g~~CEk~C~--C~~~C~nRF~GC~C~~ 719 (846)
|..-+-|.+.|.|. ++|.|. .|-|.|- |+..|..=-+||-|+.
T Consensus 7 C~~~gsC~C~~sCkCk~CkCt----scKKsccsccP~GCakCaqGcvCKg 52 (61)
T d4mt2a_ 7 CATDGSCSCAGSCKCKQCKCT----SCKKSCCSCCPVGCAKCSQGCICKE 52 (61)
T ss_dssp SCSSSCCCCTTCSCCSSCCCT----TCCCCSSTTSCTTCTTTTTSCCSCT
T ss_pred ccCCCcEecCCceeecccccc----ccccccccccccchHHHcCcceEcC
Confidence 44455666666664 566663 4556543 4566777778888853
No 41
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.58 E-value=29 Score=27.01 Aligned_cols=47 Identities=26% Similarity=0.328 Sum_probs=33.5
Q ss_pred cccccchhhhhHhhhhhcCCc------HHHHHHHHh--hcCCChhHHHHHH-HHhh
Q 003112 205 KDFVDSEDYILRMTIKEVGLS------DATLESLAQ--CFSRSPSEVKARY-EILS 251 (846)
Q Consensus 205 ~~f~e~eD~~~~~~~~e~g~s------d~vl~~l~~--~~~~~~sei~eRy-~~L~ 251 (846)
-.|++.||.+|+.-++++... ..|-..|++ .-.-|-.-+++|| +.|+
T Consensus 3 ~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 3 IAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc
Confidence 359999999999988887433 456666653 3457888889999 4443
No 42
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.84 E-value=41 Score=25.65 Aligned_cols=41 Identities=32% Similarity=0.409 Sum_probs=35.7
Q ss_pred CcchhhHHHHHHHHHhhCC-cchHHHHHhhCCCCcHHHHHHHHH
Q 003112 556 SWKTIEKGLFDKGVEIFGR-NSCLIARNLLNGLKTCWEVFQYMT 598 (846)
Q Consensus 556 ~Wt~~E~~L~~k~~eifg~-NsClIAr~Ll~g~KtC~EV~~~m~ 598 (846)
+|+-.|-.-|-++.+.||+ |.=.||.-+ ..||=-||-+|+.
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d~~~Ia~e~--~~Kt~eEV~~Y~~ 42 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDDIDNIAKDV--EGKTPEEVIEYNA 42 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHTTSS--TTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHh--cCCCHHHHHHHHH
Confidence 5999999999999999997 788888766 5699999998875
No 43
>d2ev0a2 a.76.1.1 (A:63-136) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=20.79 E-value=24 Score=28.10 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=23.4
Q ss_pred hcCCcHHHHHHHHhhcC--CChhHHHHHHHHhhh
Q 003112 221 EVGLSDATLESLAQCFS--RSPSEVKARYEILSK 252 (846)
Q Consensus 221 e~g~sd~vl~~l~~~~~--~~~sei~eRy~~L~~ 252 (846)
||.+|+++++.|..|++ -...+.++.++.+++
T Consensus 40 EH~is~~~~~~l~~~l~~~~~~P~~~~~~~~~~~ 73 (74)
T d2ev0a2 40 EHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQK 73 (74)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHCcchhChHHHHHHHHHhc
Confidence 78899999999988887 334456667766653
Done!