BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003117
(846 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93422|SYH_ORYSJ Histidine--tRNA ligase OS=Oryza sativa subsp. japonica
GN=Os05g0150900 PE=2 SV=2
Length = 788
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/755 (53%), Positives = 516/755 (68%), Gaps = 54/755 (7%)
Query: 139 LDHKSSALSAIIDAVAALSCEASGADVAAFNSIDSGDGFTAKEEIGVAGDLKVLLNGSKL 198
+D +S L + DAVAALSCEA+ DVAAF+ SGDG +AK+E VA D+K+LL GSKL
Sbjct: 36 IDCCASPLVRVADAVAALSCEAARGDVAAFDVPTSGDGLSAKDEADVAADVKMLLFGSKL 95
Query: 199 VGKMKSE---DILEIPKINGKLREVVKSVHSSTRVELNSSVKVGI-------SGTAKAVG 248
VG ++P +NG RE V+++H+ R+ELN+ VK+G G +A+
Sbjct: 96 VGAAGGADAASFTKVPTVNGIFREAVRALHARVRIELNAPVKLGKRDAVQTGEGKEEALV 155
Query: 249 ANALALAAAIHNLGESSLYRAKMNLNSINSDGLRSLFEKDCSSGDNLRKTYKLVLDANFE 308
A A LA + + + S+ RA++ + I+ LR K + G + ++ +
Sbjct: 156 ALATQLARPVQAMLKLSVARARLCVARIDDAELR----KKLTDGVEIDDLKGMLGKVTID 211
Query: 309 EDYVKFLHEANVLLGMVWKIVTWEAVLAFVALEGGELL-----GEKVNGGDVVVDKKSEK 363
D V L L I+ WEA +A +E + E+ G + +
Sbjct: 212 SDAVSVLRGVYNSLLKFRDILAWEAAVAMAVIEMDSSIEKPQACEENEAGSSTENPHASG 271
Query: 364 KKKKAVLGKG--------TGVIVQLIKD------RLQSKSLGILEKWSEDLFSFFDPRDP 409
+K K T ++ L++D + S + +L +W +L FDP+ P
Sbjct: 272 EKPKGDKKSKKKKTLGKGTSAVLMLLRDLVTNGKEVLSVNSALLAEWGTELSLLFDPKCP 331
Query: 410 EFDGLLTKIREIVESNESRRLPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDT 469
L+ K++EIVE+NE RRLPK+PKGTRDF KEQMA+RE AFSIIT VFK HGA++LDT
Sbjct: 332 RLVSLVDKVKEIVETNEVRRLPKIPKGTRDFGKEQMAIREHAFSIITGVFKMHGAVSLDT 391
Query: 470 PVFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAK 529
PVFE+RETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMN ++S KR+QIAK
Sbjct: 392 PVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNNISSLKRYQIAK 451
Query: 530 VYRRDNPSKGRYREFYQCDFDIA--------DFEVVKILTELLNELDIGDYEIKLNHRLL 581
VYRRDNPSKGRYREFYQCDFDIA DFEV+K+LTELL++LDIG YEIKLNHR L
Sbjct: 452 VYRRDNPSKGRYREFYQCDFDIAGVYETMEPDFEVIKVLTELLDQLDIGTYEIKLNHRKL 511
Query: 582 LDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGS 641
LDGMLEICGVP EKFRT+CSSIDKLDKQ+FEQ+KKE+V+EKG+S ETAD+IG VK RG
Sbjct: 512 LDGMLEICGVPPEKFRTVCSSIDKLDKQTFEQVKKELVDEKGISNETADKIGDLVKTRGP 571
Query: 642 PLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG- 700
PL +L +LR+EGS F+ N+ + AL++LEILF+AL+K+ I K+VFDLSLARGLDYYTG
Sbjct: 572 PLEVLLELRKEGSKFMGNAGSVTALNELEILFKALDKANAIGKIVFDLSLARGLDYYTGV 631
Query: 701 -----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQII 749
VGSIAAGGRYDNL+GMF KQVPAVGVSLGIERVF IMEQ + E+NQ I
Sbjct: 632 IYEAVFKGTTQVGSIAAGGRYDNLVGMFSGKQVPAVGVSLGIERVFAIMEQQEMEKNQ-I 690
Query: 750 RATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVG 809
RATET+VLV ++G L LAAELVSELWNA +KAE+ + ++ + A +S IPWMV+VG
Sbjct: 691 RATETEVLVSIIGKDLILAAELVSELWNAGIKAEFKLTTRIQNHLKYATQSGIPWMVLVG 750
Query: 810 ERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 844
E E++ G VKLKN+ +QEE + R+ F + ++++L
Sbjct: 751 ESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQKL 785
Score = 38.1 bits (87), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 10 ITVGGKGSSLNSSSVYAISNGLAQVRVDSSA 40
+T+GGKG++L ++VYA+S+GLA +D A
Sbjct: 10 VTLGGKGAALTPAAVYALSHGLADPAIDCCA 40
>sp|Q2KI84|SYHC_BOVIN Histidine--tRNA ligase, cytoplasmic OS=Bos taurus GN=HARS PE=2 SV=1
Length = 509
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/455 (54%), Positives = 322/455 (70%), Gaps = 47/455 (10%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGTRD++ QMAVREK F +I FKRHGA +DTPVFE++ETL GKYGEDSKLIYD
Sbjct: 57 KTPKGTRDYSPRQMAVREKVFDVIISCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYD 116
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDF 549
L DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYRRDNP ++GRYREFYQCDF
Sbjct: 117 LKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDF 176
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E +KI+ E+L+ L IGD+ +K+N R +LDGM ICGVP KFRTICS
Sbjct: 177 DIAGQFDPMLPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVPDSKFRTICS 236
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
S+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G + L+ +L Q+ L +N
Sbjct: 237 SVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG-VSLVEQLLQDPKLS-QNKQ 294
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYT--------------------GV 701
A L DL++LF+ L DK+ FDLSLARGLDYYT GV
Sbjct: 295 ALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQPPARAGEEPLGV 354
Query: 702 GSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVG 759
GS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV
Sbjct: 355 GSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVA 414
Query: 760 -----LLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDR---ARESKIPWMVIVGER 811
LL ++L +L+SELW+A +KAE +++KK KL+++ E+ IP + I+GE+
Sbjct: 415 SAQKKLLEERL----KLISELWDAGIKAE-LLYKKNPKLLNQLQYCEETGIPLVAIIGEQ 469
Query: 812 ELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
EL +G++KL+++ + +E + R + VEEI+RR +Q
Sbjct: 470 ELKDGVIKLRSVASREEVDVRREDLVEEIKRRTSQ 504
>sp|Q61035|SYHC_MOUSE Histidine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Hars PE=2
SV=2
Length = 509
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/455 (54%), Positives = 322/455 (70%), Gaps = 47/455 (10%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGTRD++ QMAVREK F +I FKRHGA +DTPVFE++ETL GKYGEDSKLIYD
Sbjct: 57 KTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYD 116
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDF 549
L DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYRRDNP ++GRYREFYQCDF
Sbjct: 117 LKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDF 176
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E +KI+ E+L+ L IG++ +K+N R +LDGM +CGVP KFRTICS
Sbjct: 177 DIAGQFDPMIPDAECLKIMCEILSSLQIGNFLVKVNDRRILDGMFAVCGVPDSKFRTICS 236
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
S+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G + L+ +L Q+ L +N
Sbjct: 237 SVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG-VSLVEQLLQDPKLS-QNKQ 294
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYT--------------------GV 701
A L DL++LF+ L DK+ FDLSLARGLDYYT GV
Sbjct: 295 AVEGLGDLKLLFEYLILFGIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGV 354
Query: 702 GSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVG 759
GSIAAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV
Sbjct: 355 GSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEASEEKVRTTETQVLVA 414
Query: 760 -----LLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDR---ARESKIPWMVIVGER 811
LL ++L +LVSELW+A +KAE +++KK KL+++ E+ IP + I+GE+
Sbjct: 415 SAQKKLLEERL----KLVSELWDAGIKAE-LLYKKNPKLLNQLQYCEEAGIPLVAIIGEQ 469
Query: 812 ELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
EL +G++KL+++ + +E + R + VEEI+RR NQ
Sbjct: 470 ELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 504
>sp|P12081|SYHC_HUMAN Histidine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=HARS PE=1
SV=2
Length = 509
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/474 (53%), Positives = 332/474 (70%), Gaps = 49/474 (10%)
Query: 415 LTKIREIVESNESRR--LPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVF 472
L K++ + +ES++ + K PKGTRD++ QMAVREK F +I FKRHGA +DTPVF
Sbjct: 38 LLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVF 97
Query: 473 EMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYR 532
E++ETLMGKYGEDSKLIYDL DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYR
Sbjct: 98 ELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYR 157
Query: 533 RDNP--SKGRYREFYQCDFDIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLL 582
RDNP ++GRYREFYQCDFDIA D E +KI+ E+L+ L IGD+ +K+N R +L
Sbjct: 158 RDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRIL 217
Query: 583 DGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSP 642
DGM ICGV KFRTICSS+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G
Sbjct: 218 DGMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG- 276
Query: 643 LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYT--- 699
+ L+ +L Q+ L +N A L DL++LF+ L DK+ FDLSLARGLDYYT
Sbjct: 277 VSLVEQLLQDPKLS-QNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVI 335
Query: 700 -----------------GVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQ 740
GVGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ
Sbjct: 336 YEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 395
Query: 741 IQKERNQIIRATETQVLVG-----LLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLID 795
+ + IR TETQVLV LL ++L +LVSELW+A +KAE +++KK KL++
Sbjct: 396 RLEALEEKIRTTETQVLVASAQKKLLEERL----KLVSELWDAGIKAE-LLYKKNPKLLN 450
Query: 796 R---ARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
+ E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR Q
Sbjct: 451 QLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504
>sp|Q5R4R2|SYHC_PONAB Histidine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=HARS PE=2
SV=1
Length = 509
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/474 (52%), Positives = 332/474 (70%), Gaps = 49/474 (10%)
Query: 415 LTKIREIVESNESRR--LPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVF 472
L K++ + +ES++ + K PKGTRD++ QMAVREK F +I FKRHGA +DTPVF
Sbjct: 38 LLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVF 97
Query: 473 EMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYR 532
E++ETLMGKYGEDSKLIYDL DQGGEL SLRYDLTVPFARY+AMN LT+ KR+ IAKVYR
Sbjct: 98 ELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYR 157
Query: 533 RDNP--SKGRYREFYQCDFDIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLL 582
RDNP ++GRYREFYQCDFDIA D E +KI+ E+L+ L IGD+ +K+N R +L
Sbjct: 158 RDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRIL 217
Query: 583 DGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSP 642
DGM ICGV KFRTICSS+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G
Sbjct: 218 DGMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGG- 276
Query: 643 LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYT--- 699
+ L+ +L Q+ L ++ A L DL++LF+ L DK+ FDLSLARGLDYYT
Sbjct: 277 VSLVEQLLQDPKLS-QSKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVI 335
Query: 700 -----------------GVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQ 740
GVGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ
Sbjct: 336 YEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQ 395
Query: 741 IQKERNQIIRATETQVLVG-----LLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLID 795
+ + +R TETQVLV LL ++L +LVSELW+A +KAE +++KK KL++
Sbjct: 396 RLEALEEKVRTTETQVLVASAQKKLLEERL----KLVSELWDAGIKAE-LLYKKNPKLLN 450
Query: 796 R---ARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
+ E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR Q
Sbjct: 451 QLQYCEEAGIPLVAIIGEQELEDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504
>sp|P70076|SYHC_TAKRU Histidine--tRNA ligase, cytoplasmic OS=Takifugu rubripes GN=hars
PE=3 SV=1
Length = 519
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/461 (52%), Positives = 311/461 (67%), Gaps = 55/461 (11%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K KGTRD+ +QMA+REK F+ I FKRHGA +DTPVFE++ETL GKYGEDSKLIYD
Sbjct: 62 KTAKGTRDYNPKQMAIREKVFNTIVSCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYD 121
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDF 549
L DQGGEL SLRYDLTVPFARY+AMN +T+ KR+ IAKVYRRDNP ++GRYREFYQCDF
Sbjct: 122 LKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDF 181
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E +KI+ E+L+ELD+GD+ IK+N R +LDGM +CGVP FRTICS
Sbjct: 182 DIAGQYDAMIPDAECLKIVHEILSELDLGDFRIKVNDRRILDGMFAVCGVPDNMFRTICS 241
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
++DKLDK +E +K EMV EKGLS E AD+IG +V +G + L +L Q+ + +++
Sbjct: 242 TVDKLDKLPWEAVKNEMVNEKGLSEEAADQIGVYVGMQGG-MDLAERLLQDQKM-CQSTQ 299
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG--------------------- 700
A L D+++LF L+ + DKVVFDLSLARGLDYYTG
Sbjct: 300 ACAGLTDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEAILTQAGVAPVAPETSN 359
Query: 701 ---------VGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQII 749
VGS+A GGRYD L+GMF K +VP VGVS+GIER+F+IMEQ + + I
Sbjct: 360 EAPTEECVTVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASTEKI 419
Query: 750 RATETQVLVG-----LLGDKLPLAAELVSELWNAKVKAEYMVHK--KVMKLIDRARESKI 802
R TE QV+V LL ++L L++ELWNA +KAE M K K++ + ES I
Sbjct: 420 RTTEVQVMVAAAQKNLLEERL----RLITELWNAGIKAELMYKKSPKLLSQLQHCEESGI 475
Query: 803 PWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRR 843
P + I+GE+EL G+VKL+N+ T E ISR++ + EI++R
Sbjct: 476 PLVAILGEQELKNGVVKLRNVATRDEVDISRADLIAEIKKR 516
>sp|Q86AS6|SYHC_DICDI Histidine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=hisS PE=3 SV=1
Length = 481
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/439 (52%), Positives = 299/439 (68%), Gaps = 26/439 (5%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGT+D+ QM +RE+ F I +VFKRHGA+ ++TPVFE++ETL GKYGEDSKLIYD
Sbjct: 40 KTPKGTQDYNPRQMTIREQVFDGIKQVFKRHGAVTIETPVFELKETLTGKYGEDSKLIYD 99
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDF 549
L DQGGE+CSLRYDLTVPFARYVAMNG+ + KR+ IA+VYRRDNP +KGR+REFYQCDF
Sbjct: 100 LQDQGGEICSLRYDLTVPFARYVAMNGVLNIKRYHIARVYRRDNPIMTKGRFREFYQCDF 159
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E + ++ E+L ++ +GD++IKLNHR LLD + ICGVP++KFR ICS
Sbjct: 160 DIAGTYDLMVPDAECLVMICEILEQVKVGDFQIKLNHRKLLDAIFAICGVPADKFRAICS 219
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
++DKLDK +E+++KEMVE K L AD+I FV + P+ LL LR G + N
Sbjct: 220 AVDKLDKSPWEEVRKEMVEVKALDGAVADKIEKFVSLKDEPIKLLQHLRATG-MCDGNKD 278
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------VGSIAAGGR 709
A AL LE LF LE ++FDLSLARGLDYYTG VGSIAAGGR
Sbjct: 279 ATEALSQLETLFGYLECFGVTQHILFDLSLARGLDYYTGIIYEAVLTGQDRVGSIAAGGR 338
Query: 710 YDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQV-LVGLLGDKLPLA 768
YD L+GM+G K VPAVG S+GIER+FTI+E K+ N+ IR TQV +V + D +
Sbjct: 339 YDGLVGMYGKKDVPAVGFSIGIERIFTILEDEYKKENKKIRENATQVFVVQMEKDLIKER 398
Query: 769 AELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTT 826
+VSELW A + AE Y V+ K+ ++ A ES IP ++I+G+ E+ + +K +
Sbjct: 399 LAIVSELWKAGINAEFSYKVNPKLPAQLNTADESNIPLIIIIGKSEVETNSLSVKTMHDR 458
Query: 827 QEEVISRSNFVEEIQRRLN 845
++ I RSNF +I+ L+
Sbjct: 459 KQVSIERSNFTVKIKEILS 477
>sp|P07178|SYHC_MESAU Histidine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus GN=HARS
PE=2 SV=1
Length = 508
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/469 (49%), Positives = 313/469 (66%), Gaps = 40/469 (8%)
Query: 415 LTKIREIVESNESRR--LPKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVF 472
L K++ + +ES++ + K PKGTRD++ QMAVREK F +I FKRHGA +DTPVF
Sbjct: 38 LLKLKAQLGHDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIICCFKRHGAEVIDTPVF 97
Query: 473 EMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYR 532
E++ETLMGKYG+D KLIYDL DQGGEL SLRYDLTVPF RY+AMN LT+ KR+ IAKVYR
Sbjct: 98 ELKETLMGKYGQDCKLIYDLKDQGGELLSLRYDLTVPFGRYLAMNNLTNIKRYHIAKVYR 157
Query: 533 RDNP--SKGRYREFYQCDFDIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLL 582
RDNP ++GRY DFDIA D E +KI+ E+L+ L IG + +K+N R +L
Sbjct: 158 RDNPAMTRGRYLNSITVDFDIAGQFDPMIPDAECLKIMCEILSSLQIGKFLVKVNDRRIL 217
Query: 583 DGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSP 642
DGM +CGVP KFRTICSS+DKLDK S+E++K EMV EKGL+ E ADRIG +V++ G
Sbjct: 218 DGMFAVCGVPDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGE- 276
Query: 643 LVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGV- 701
+ L+ +L Q+ L +N A L DL++LF+ L DK+ FDLSLARGLDYYTGV
Sbjct: 277 VCLVEQLLQDPKLS-QNKQAVEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVI 335
Query: 702 ------------------GSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQI 741
G RYD L+GMF K +VP VG+S+G+ER+F+I+EQ
Sbjct: 336 YVAVLLQMPTGAGEEPWCGQCGCWRRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQR 395
Query: 742 QKERNQIIRATETQVLVGLLGDKLPLA-AELVSELWNAKVKAEYMVHKKVMKLIDR---A 797
+ + +R TETQVLV KL + +LW+A +KAE +++KK KL+++
Sbjct: 396 LEALEEKVRTTETQVLVASAQKKLAGGETKACLQLWDAGIKAE-LLYKKNPKLLNQLQYC 454
Query: 798 RESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR NQ
Sbjct: 455 EETGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 503
>sp|P49590|SYHM_HUMAN Probable histidine--tRNA ligase, mitochondrial OS=Homo sapiens
GN=HARS2 PE=1 SV=1
Length = 506
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/454 (48%), Positives = 304/454 (66%), Gaps = 45/454 (9%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGTRD + + M VREK ++ FKRHGA +DTP FE++ETL KYGEDS L+YD
Sbjct: 58 KTPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGEDSGLMYD 117
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDF 549
L DQGGEL SLRYDLTVPFARY+AMN + KR+ + KV+RR++P+ +GRYREF QCDF
Sbjct: 118 LKDQGGELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPTIVQGRYREFCQCDF 177
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E +KI+ E+L+ L +GD+ IK+N R ++DGM +CGVP KFR ICS
Sbjct: 178 DIAGQFDPMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPESKFRAICS 237
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
SIDKLDK +++ ++ EMV +KGL+ E ADRIG +V+ G + L+ ++ Q+ L +N
Sbjct: 238 SIDKLDKMAWKDVRHEMVVKKGLAPEVADRIGDYVQCHGG-VSLVEQMFQDPRLS-QNKQ 295
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG--------------------V 701
A L DL++LF+ L DK+ FDLSLARGLDYYTG V
Sbjct: 296 ALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNV 355
Query: 702 GSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVG 759
GS+AAGGRYD L+GMF K +VP VG+S+G+ER+F I+EQ K + + +R TETQV V
Sbjct: 356 GSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVA 415
Query: 760 -----LLGDKLPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERE 812
L ++L +L++ELW++ +KAE Y + K++ + + IP +VI+GE+E
Sbjct: 416 TPQKNFLQERL----KLIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQE 471
Query: 813 LNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
L EG++K++++ + +E I R NFV EIQ+RL++
Sbjct: 472 LKEGVIKIRSVASREEVAIKRENFVAEIQKRLSE 505
>sp|Q5R5E5|SYHM_PONAB Probable histidine--tRNA ligase, mitochondrial OS=Pongo abelii
GN=HARS2 PE=2 SV=1
Length = 506
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/454 (48%), Positives = 303/454 (66%), Gaps = 45/454 (9%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGTRD + + M VREK ++ FKRHGA +DTP FE++ETL KYGEDS L+YD
Sbjct: 58 KTPKGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGEDSGLMYD 117
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDF 549
L DQGGEL SLRYDLTVPFARY+AMN + KR+ + KV+RR++P+ +GRYREF QCDF
Sbjct: 118 LKDQGGELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPTIVQGRYREFCQCDF 177
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E +KI+ E+L+ L +GD+ IK+N R ++DGM +CGVP KFR ICS
Sbjct: 178 DIAGQFDPMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPESKFRAICS 237
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
SIDKLDK +++ ++ EMV +KGL+ E ADRIG +V+ G + L+ ++ Q+ L +N
Sbjct: 238 SIDKLDKMAWKDVRHEMVVKKGLAPEVADRIGDYVQCHGG-VSLVEQMFQDPRLS-QNKQ 295
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG--------------------V 701
A L DL++LF+ L DK+ FDLSLARGLDYYTG V
Sbjct: 296 ALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNV 355
Query: 702 GSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVG 759
GS+AAGGRYD L+GMF K +VP VG+S+G+ER+F I+EQ K + + +R TETQV V
Sbjct: 356 GSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVA 415
Query: 760 -----LLGDKLPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERE 812
L ++L +L++ELWN+ +KAE Y + K++ + + IP +VI+GE+E
Sbjct: 416 TPQKNFLQERL----KLIAELWNSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQE 471
Query: 813 LNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
L EG++K++++ + +E I R N V EIQ+RL++
Sbjct: 472 LKEGVIKIRSVASREEVAIKRENLVAEIQKRLSE 505
>sp|A5D7V9|SYHM_BOVIN Probable histidine--tRNA ligase, mitochondrial OS=Bos taurus
GN=HARS2 PE=2 SV=1
Length = 506
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/454 (48%), Positives = 302/454 (66%), Gaps = 45/454 (9%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGTRD + +QM VREK ++ FKRHGA LDTP FE++E L KYGEDS LIYD
Sbjct: 58 KTPKGTRDLSPQQMVVREKILDVVVSCFKRHGAKGLDTPAFELKEILTEKYGEDSGLIYD 117
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDF 549
L DQGGEL SLRYDLTVPFARY+AMN + KR+ + KV+RR++P+ +GRYREFYQCDF
Sbjct: 118 LKDQGGELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPTIVQGRYREFYQCDF 177
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E +KI+ E+L+ L +GD+ IK++ R +LDG+ +CGVP KF ICS
Sbjct: 178 DIAGQFDPMIPDAECLKIMCEILSGLHLGDFLIKVSDRRILDGIFAVCGVPESKFHAICS 237
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
S+DKLDK S++ ++ EMV +KGL+ E ADRIG +V+ G + L+ ++ Q+ L +N
Sbjct: 238 SVDKLDKISWKDVRHEMVVKKGLAPEVADRIGDYVQCHGG-ISLVEQMFQDPRLS-QNKQ 295
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGV-------------------- 701
A L DL++LF+ L +KV FDLSLARGLDYYTGV
Sbjct: 296 ALEGLGDLKLLFEYLTLFGVAEKVSFDLSLARGLDYYTGVIYEAVLLQTPVHAEEEPLNM 355
Query: 702 GSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVG 759
GS+AAGGRYD L+GMF + +VP VG+S+G+ER+F+I+EQ K + IR TETQV V
Sbjct: 356 GSVAAGGRYDGLVGMFDPRGHKVPCVGLSIGVERIFSIVEQRIKTFGEKIRTTETQVFVA 415
Query: 760 -----LLGDKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERE 812
L ++L +L++ELW+A +KAE M + K++ + IP +VI+GE+E
Sbjct: 416 TPQKNFLQERL----KLIAELWDAGIKAELMYKNNPKLLPQLHYCENMGIPLVVIIGEQE 471
Query: 813 LNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
L EG++KL+++ + +E I R N V EIQ+RL++
Sbjct: 472 LKEGVIKLRSVASREEVAIKRENLVAEIQKRLSE 505
>sp|Q99KK9|SYHM_MOUSE Probable histidine--tRNA ligase, mitochondrial OS=Mus musculus
GN=Hars2 PE=2 SV=1
Length = 505
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/457 (47%), Positives = 301/457 (65%), Gaps = 51/457 (11%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K+PKGTRD + +QM VREK I FKRHGA LDTP FE++E L KY ++ L+YD
Sbjct: 57 KVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDNFGLMYD 116
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDF 549
L DQGGEL SLRYDLTVPFARY+AMN L KR+Q+ KV+RR++P ++GRYREF QCDF
Sbjct: 117 LKDQGGELLSLRYDLTVPFARYLAMNKLKKMKRYQVGKVWRRESPAIAQGRYREFCQCDF 176
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DIA D E ++I+ E+L+ L +GD+ IK+N R ++DG+ +CGVP K RTICS
Sbjct: 177 DIAGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGIFAVCGVPESKLRTICS 236
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
S+DKLDK S+E ++ EMV +KGL+ E ADRIG FV+ G + L+ L ++ L S
Sbjct: 237 SMDKLDKMSWEGVRHEMVAKKGLAPEVADRIGDFVQYHGG-ISLVEDLFKDPRL----SQ 291
Query: 662 AKLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------------ 700
++LAL DL++LF+ L DK+ DLSLARGLDYYTG
Sbjct: 292 SQLALQGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKET 351
Query: 701 --VGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQV 756
VGS+AAGGRYDNL+ F K VP VG+S+G+ER+F ++EQ K + +R TETQV
Sbjct: 352 LSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVERIFYLVEQKMKMSGEKVRTTETQV 411
Query: 757 LVG-----LLGDKLPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVG 809
V L ++L ++++ELW+A +KAE Y + K++ + ++ IP MVI+G
Sbjct: 412 FVATPQKNFLQERL----KIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVIIG 467
Query: 810 ERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
E+E NEG++KL+++ + +E I+R + V EIQ+RL++
Sbjct: 468 EQERNEGVIKLRSVASREEVTINRESLVAEIQKRLSE 504
>sp|O43011|SYH_SCHPO Histidine--tRNA ligase, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hts1 PE=1 SV=2
Length = 563
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/476 (46%), Positives = 293/476 (61%), Gaps = 67/476 (14%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGT+D+ + + +RE FS +TE+FKRHG + LDTPVFE++E L GKYGEDSKLIYD
Sbjct: 89 KTPKGTKDWCDKDVVLREHIFSTVTEIFKRHGGVTLDTPVFELKEILSGKYGEDSKLIYD 148
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNG-LTSFKRHQIAKVYRRDNP--SKGRYREFYQCD 548
L DQGGELCSLRYDLTVPFAR++AMN +TS KR IAKVYRRD P +KGR REFYQCD
Sbjct: 149 LKDQGGELCSLRYDLTVPFARWLAMNPKVTSIKRFHIAKVYRRDQPAMTKGRMREFYQCD 208
Query: 549 FDIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTIC 600
FDIA D E +K+L E L+ L++G+Y IKLNHR +LDG+ +CGVP +K RTI
Sbjct: 209 FDIAGNYDPMIPDSEALKVLVEALDALEVGNYTIKLNHRKILDGIFTVCGVPDDKIRTIS 268
Query: 601 SSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENS 660
S++DKLDK +E +++EMV EKGL E AD+I +V +G LL KL + SL NS
Sbjct: 269 SAVDKLDKLPWEDVRREMVVEKGLKEEVADKIKEYVLLKGD-RSLLDKLEAD-SLLSSNS 326
Query: 661 SAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG-------------------- 700
SA A +D+ +LF LE +D+ FD+SLARGLDYYTG
Sbjct: 327 SAVAAFNDMRLLFDYLEAFGVLDRFSFDMSLARGLDYYTGIIYEAVTEASAPKIKSSAEK 386
Query: 701 -----------------VGSIAAGGRYDNLIGMFGTK---QVPAVGVSLGIERVFTIMEQ 740
VGSIAAGGRYDNL+GMF K ++P VG+SLG+ER+F+I+
Sbjct: 387 KKSADPEADRSNDDSIGVGSIAAGGRYDNLVGMFAAKKNAKIPCVGISLGLERIFSILR- 445
Query: 741 IQKERNQIIRATETQVLVGLLGDK------LPLAAELVSELWNAKVKAE--YMVHKKVMK 792
K ++ IRA + V V G L + +LW +KAE Y V K +
Sbjct: 446 -SKIPDEDIRANDVDVFVMAFGGGKEWTGFLKERMSVCKDLWANGIKAEFLYKVKPKPRQ 504
Query: 793 LIDRARESKIPWMVIVGERELNEGIVKLKNI----DTTQEEVISRSNFVEEIQRRL 844
D A + +P+ VI+G+ E +G V++K + ++ + +++ R V +++ L
Sbjct: 505 QFDAADKFDVPFAVILGQDEFAKGSVRIKQMGLKENSDEGQLVPREEMVSVLKKLL 560
>sp|P07263|SYH_YEAST Histidine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HTS1 PE=1 SV=2
Length = 546
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/479 (45%), Positives = 288/479 (60%), Gaps = 68/479 (14%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGT+D+A M +RE FS ++ +FK+HG + +DTPVFE+RE L GKYGEDSKLIY+
Sbjct: 56 KTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKYGEDSKLIYN 115
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDF 549
L DQGGELCSLRYDLTVPFARYVAMN + S KR+ IAKVYRRD P +KGR REFYQCDF
Sbjct: 116 LEDQGGELCSLRYDLTVPFARYVAMNNIQSIKRYHIAKVYRRDQPAMTKGRMREFYQCDF 175
Query: 550 DIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
D+A D E + IL E L L I D++IKLNHR +LDG+ +I GV E R I S
Sbjct: 176 DVAGTFESMVPDSECLSILVEGLTSLGIKDFKIKLNHRKILDGIFQIAGVKDEDVRKISS 235
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
++DKLDK +E +KKEM EEKG S ETAD+IG +VK GS + + L + ++ N
Sbjct: 236 AVDKLDKSPWEAVKKEMTEEKGQSEETADKIGEYVKLNGSLKEIHAVLSADANI-TSNEK 294
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYT---------------------- 699
AK LDD+ L + E + FDLSLARGLDYYT
Sbjct: 295 AKQGLDDIATLMKYTEAFDIDSFISFDLSLARGLDYYTGLIYEVVTSASAPPENASELKK 354
Query: 700 ------------GVGSIAAGGRYDNLIGMFG------TKQVPAVGVSLGIERVFTIMEQI 741
GVGSIAAGGRYDNL+ MF + Q+P VG+S G+ER+F++++Q
Sbjct: 355 KAKSAEDASEFVGVGSIAAGGRYDNLVNMFSEASGKKSTQIPCVGISFGVERIFSLIKQ- 413
Query: 742 QKERNQIIRATETQVLVGLLG------DKLPLAAELVSELWNAKVKAEYMVHKKV--MKL 793
+ + I+ T TQV V G LP ++ +LW+A ++AEY+ K K
Sbjct: 414 RINSSTTIKPTATQVFVMAFGGGKDWTGYLPERMKVTKQLWDAGIEAEYVYKAKANPRKQ 473
Query: 794 IDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE------EVISRSNFVEEIQRRLNQ 846
D A ++ VI+G+ E EG +++K + QE E++S ++ V +Q +L+Q
Sbjct: 474 FDAAEKAGCHIAVILGKEEYLEGKLRVKRL--GQEFADDDGELVSAADIVPIVQEKLSQ 530
>sp|P34183|SYH_CAEEL Histidine--tRNA ligase OS=Caenorhabditis elegans GN=hrs-1 PE=2 SV=3
Length = 521
Score = 360 bits (923), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 206/462 (44%), Positives = 283/462 (61%), Gaps = 61/462 (13%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLIY 490
K KGTRD+ Q A+R +TE F R+GA +DTPVFE+R+ LMGKYGE+ KL+Y
Sbjct: 63 KTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEEGGKLVY 122
Query: 491 DLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCD 548
DL DQGGEL SLRYDLTVPFARY+AMN +T+ R+QIAKVYRRD P S+GRYREFYQCD
Sbjct: 123 DLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYREFYQCD 182
Query: 549 FDIA--------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTIC 600
FDIA + E + I+ ELL +L+IG++ I LNHRL+L+GM + G+P++ F+TIC
Sbjct: 183 FDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFINLNHRLILEGMFAVSGIPAKDFKTIC 242
Query: 601 SSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERG-----SPLVLLSKLRQEGSL 655
SS+DKLDK +E +++EM+ EK L+ E ++G V+ R + L LL K+ Q L
Sbjct: 243 SSVDKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFRELNSDLNNLELLEKMSQLPDL 302
Query: 656 FLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYT---------------- 699
+N K ++L++L + L + V ++ SLARGLDYYT
Sbjct: 303 G-QNDKFKKGAEELKVLIEYL-NVDGVTTVRYEPSLARGLDYYTGAIYEAVAPKALEGTA 360
Query: 700 ------------GVGSIAAGGRYDNLIGMFGTK-QVPAVGVSLGIERVFTIMEQIQKERN 746
GVGS+AAGGRYD L+ MF +K VP GVS GIER+F IME QK
Sbjct: 361 VENSEDTAGQPVGVGSVAAGGRYDGLVKMFDSKANVPCCGVSFGIERLFAIMEARQK--- 417
Query: 747 QIIRATETQVLVG-----LLGDKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARE 799
IR T+T+V V L+ D+ +LV L +A +K E + + K++ A E
Sbjct: 418 VAIRTTQTEVYVASAQKNLVRDR----KKLVKMLRSAGIKTEMALKANPKLLTQFQYAEE 473
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 841
+IP +++GE+EL +G+VKL+N+ T E+ I + ++
Sbjct: 474 RRIPLAIVIGEQELKDGVVKLRNVVTRDEQTIKLDQLITAVR 515
>sp|C4V9J0|SYHC_NOSCE Probable histidine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_101238 PE=3 SV=1
Length = 430
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 254/444 (57%), Gaps = 51/444 (11%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGT D + V E +FK HGA+ +DTPVFE++ L+ KYGED+KLIYD
Sbjct: 4 KTPKGTTDLNPDDALVYEDLIDRTKNIFKLHGAVPIDTPVFELKSILLNKYGEDTKLIYD 63
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDF 549
L + GGE C+LRYDLTVPF+RY++MN L KR+QI KVYRRD PS +GR+REF Q DF
Sbjct: 64 LKNNGGEECALRYDLTVPFSRYMSMNKLKKIKRYQIGKVYRRDQPSVVQGRWREFLQADF 123
Query: 550 DI--------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DI AD E+V + LL +IGD+ I+++ + +L G+ E+C +P+ F T+ S
Sbjct: 124 DIAGESLPMMADSELVCCMNRLLKTYNIGDFVIRVSDKRILYGIFEVCEIPNNLFATVSS 183
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
SIDKLDK + I KE+ + KGL+ + + ++++ G+ VL +E ++ + S
Sbjct: 184 SIDKLDKIAVNDINKEL-KLKGLTDKQIINLNIYIQKSGTVDVL--DFLRENDVYKKCSE 240
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG-----------VGSIAAGGRY 710
A+DDL L++ + KC D ++ DLSLARGLDYYTG +GS+A GGRY
Sbjct: 241 ---AVDDLCKLYEYCKIMKCSDHLIIDLSLARGLDYYTGMIIEGKYLNKNIGSVAGGGRY 297
Query: 711 DNLIGMF------GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK 764
DNLIG T VP G S+G+ R+F+ +++ + N + + + L LL ++
Sbjct: 298 DNLIGSLENSSYTNTYNVPCAGFSIGLSRIFSCIQKPKVNTNVKVFISASGKL--LLEER 355
Query: 765 LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESK-------IPWMVIVGERELNEGI 817
L + S LW A + E +K+ + E K I ++++V E + N+G
Sbjct: 356 LKIQ----SILWEANISLETFYNKR-----NNPGEHKKYCVKHGIKYLIVVKEEQYNKGF 406
Query: 818 VKLKNIDTTQEEVISRSNFVEEIQ 841
V + ++T E VI N +Q
Sbjct: 407 VTVIEVNTNLENVIMIDNLPSHLQ 430
>sp|Q6E6B4|SYHC_ANTLO Probable histidine--tRNA ligase, cytoplasmic OS=Antonospora
locustae PE=3 SV=1
Length = 445
Score = 286 bits (733), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/418 (41%), Positives = 246/418 (58%), Gaps = 39/418 (9%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
+ PKGT D+ + + + +TEVF+ HGA +DTP FE+RE L KYG++S+LI+D
Sbjct: 4 RTPKGTHDYGPRECYLLNRFLRAVTEVFETHGAACIDTPTFELRELLCNKYGDESRLIFD 63
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNP--SKGRYREFYQCDF 549
LADQGG++CSLRYDLTV FAR++A + + KR QI KV+RRD P SKGR REF QCD
Sbjct: 64 LADQGGDICSLRYDLTVSFARFLAKHRVQRLKRFQIGKVFRRDQPSVSKGRLREFVQCDL 123
Query: 550 DI--------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DI AD E + I++E L+ + Y+I+++ R +L+ ++E G+ F T+CS
Sbjct: 124 DIAGAYMEMVADAEAICIMSECLDRVG-HRYQIRISSRKILNALMEHSGIGRNNFATVCS 182
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
+IDK+D+ + I E+ KGL + +V G + ++ LR G L+L S
Sbjct: 183 TIDKMDRLPWADIAAEL-RTKGLVDGQVAVLKRYVCVSGG-IEVIDTLRS-GELYL-YSD 238
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------VGSIAAGGR 709
K +DDL +LF+ L D+ V DLSLARGLDYYTG VGS+A GGR
Sbjct: 239 GKKGIDDLALLFKYLGIYGVGDRAVVDLSLARGLDYYTGVIFEAALVDFKDVGSVAGGGR 298
Query: 710 YDNLI-GMFGTK---QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-K 764
YDNL+ + G K VP VG SLG+ R+ ++M ++ + R TET+V VG G
Sbjct: 299 YDNLVSSVLGKKSEWSVPCVGFSLGVTRILSVMLKVDRRRT-----TETEVFVGSSGGLL 353
Query: 765 LPLAAELVSELWNAKVKAEYMVHKK--VMKLIDRARESKIPWMVIVGERELNEGIVKL 820
L ++S LW A V AE +K L++ R++ IP+ ++VGE+E+ E +L
Sbjct: 354 LEERMGVLSRLWRAGVAAETFYTRKYGYASLMEHVRKTDIPFFLLVGEKEIAENRFRL 411
>sp|Q8SRR3|SYHC_ENCCU Probable histidine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0620 PE=3 SV=1
Length = 435
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 251/444 (56%), Gaps = 42/444 (9%)
Query: 432 KLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDSKLIYD 491
K PKGT D + Q + E+ I VF +GA+ + TP FEM+ L KYGED+KLIYD
Sbjct: 5 KTPKGTMDESPRQCFLHEEIIERIRRVFVLYGAVPISTPTFEMKSILTNKYGEDTKLIYD 64
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNGLTSFKRHQIAKVYRRDNPS--KGRYREFYQCDF 549
L DQGGE+C+LRYDLTVPFARY+A N + KR+QI +VYRRD PS +GR REF Q DF
Sbjct: 65 LKDQGGEICALRYDLTVPFARYLASNKIRRMKRYQIGRVYRRDQPSIARGRLREFVQADF 124
Query: 550 DI--------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
DI AD EVV + +L+ IG+Y IK+N R +L +LE+ GV E + T+CS
Sbjct: 125 DIAGECIQMMADAEVVSCVDRILSMFGIGEYRIKVNDRRILTSILEVVGVSCESYGTVCS 184
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSS 661
+IDK++K S+E I +E+V KGLS E ++ G V L L+ + +E
Sbjct: 185 TIDKIEKMSWEDIGRELV-LKGLSEEQVRTTKKYMTMGGKEDV-LGLLKADPVYGIERCK 242
Query: 662 AKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG-----------VGSIAAGGRY 710
A A+ D+E LF+ C +V D+SLARGLDYYTG VGS+ GGRY
Sbjct: 243 A--AVHDMEELFRLCRILGCSGSLVMDISLARGLDYYTGMILEAEYVGKSVGSVIGGGRY 300
Query: 711 DNLIGMFGTKQV--PAVGVSLGIERVFTIM-EQIQKERNQIIRATETQVLVGLLGDKLPL 767
DNL G + V P VG S+G+ R+F+++ E+ KE + ++ + L L ++L +
Sbjct: 301 DNLTENLGERCVSTPCVGFSVGVSRIFSLLYEEYDKESSTMVYVGASGGL--FLDERLSV 358
Query: 768 A-----AELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKN 822
A + SE + + + K V K KIP++V+VGE E+ G V++ N
Sbjct: 359 LRILQDANICSETFYTRRSSFESQQKYVAK-------KKIPFIVVVGESEIAAGSVQVIN 411
Query: 823 IDTTQEEVISRSNFVEEIQRRLNQ 846
T ++E++ V + NQ
Sbjct: 412 ALTRKKEIVKVEQMVSYLLDPENQ 435
>sp|Q8A6N7|SYH_BACTN Histidine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=hisS
PE=3 SV=1
Length = 454
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 250/461 (54%), Gaps = 68/461 (14%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKLI 489
P +PKGTRDF+ +MA R F+ I +V+ +G ++TP EM TLMGKYG E KL+
Sbjct: 5 PSIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGDKLL 64
Query: 490 YDLADQG--------------------GELC--SLRYDLTVPFARYVAMNG---LTSFKR 524
+ + + G + C LRYDLTVPFARYV M+ FKR
Sbjct: 65 FKIQNSGDYFSGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKR 124
Query: 525 HQIAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLN 577
+QI V+R D P KGRYREFYQCD D+ + E+++I+ + + +I IK+N
Sbjct: 125 YQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNI-RVCIKIN 183
Query: 578 HRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVK 637
+R +L G+ EI G ++K I +IDKLDK E + E+ +EKG+S E ++
Sbjct: 184 NRKILSGIAEIIG-EADKIVDITVAIDKLDKIGLENVNAEL-KEKGISDEAIAKL----- 236
Query: 638 ERGSPLVLLS-----KLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLA 692
P++LLS KL S+ + + +++ E + LE +++ DL+LA
Sbjct: 237 ---QPIILLSGTNTEKLATLKSVLAASETGMKGVEESEFILGTLETMGLKNEIELDLTLA 293
Query: 693 RGLDYYTG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 741
RGL+YYTG +GSI GGRYDNL G+FG V VG+S G +R+F ++ Q+
Sbjct: 294 RGLNYYTGAIFEVKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQL 353
Query: 742 QKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARE 799
+ + + TE + GDK + +++++ A ++AE + K+ K + A
Sbjct: 354 ELYPKEAVNGTELMFVN--FGDKEAAFSMSMLAKVRAAGIRAEIFPDAAKMKKQMSYANA 411
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 840
+P++ IVGE E+NEG LKN++T ++ ++S VEE+
Sbjct: 412 KSVPFVAIVGENEMNEGKAMLKNMETGEQNLVS----VEEL 448
>sp|Q5LAE0|SYH_BACFN Histidine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 /
NCTC 9343) GN=hisS PE=3 SV=1
Length = 454
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 249/458 (54%), Gaps = 64/458 (13%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLI 489
P +PKGTRDF+ +MA R F+ I +V+ +G ++TP EM TLMGKYGE+ KL+
Sbjct: 5 PGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLL 64
Query: 490 YDLADQGG--------ELCS--------------LRYDLTVPFARYVAMNG---LTSFKR 524
+ + + G EL S LRYDLTVPFARYV M+ FKR
Sbjct: 65 FKIQNSGNYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKR 124
Query: 525 HQIAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLN 577
+QI V+R D P KGRYREFYQCD D+ + E+++I+ + I IK+N
Sbjct: 125 YQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI-RVCIKIN 183
Query: 578 HRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVK 637
+R +L G+ EI G ++K I +IDKLDK + + KE+ EKG+S E ++
Sbjct: 184 NRKILTGIAEIIG-EADKIVDITVAIDKLDKIGLDNVNKELA-EKGISGEAIAKL----- 236
Query: 638 ERGSPLVLLS-----KLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLA 692
P++LLS KL ++ ++ + +++ E + L+ +++ DL+LA
Sbjct: 237 ---QPIILLSGTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLA 293
Query: 693 RGLDYYTG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 741
RGL+YYTG +GSI GGRYDNL G+FG V VG+S G +R+F ++ Q+
Sbjct: 294 RGLNYYTGAIFEVKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQL 353
Query: 742 QKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARE 799
+ + + TQ+L G+K + ++S+ A ++AE + K+ K + A
Sbjct: 354 ELYPKEAVNG--TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANV 411
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFV 837
IP++ IVGE E+NEG LKN+++ ++++++ +
Sbjct: 412 KNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEELI 449
>sp|Q64QS2|SYH_BACFR Histidine--tRNA ligase OS=Bacteroides fragilis (strain YCH46)
GN=hisS PE=3 SV=1
Length = 454
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 248/458 (54%), Gaps = 64/458 (13%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLI 489
P +PKGTRDF+ +MA R F+ I +V+ +G ++TP EM TLMGKYGE+ KL+
Sbjct: 5 PGIPKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLL 64
Query: 490 YDLADQG--------------------GELC--SLRYDLTVPFARYVAMNG---LTSFKR 524
+ + + G + C LRYDLTVPFARYV M+ FKR
Sbjct: 65 FKIQNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKR 124
Query: 525 HQIAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLN 577
+QI V+R D P KGRYREFYQCD D+ + E+++I+ + I IK+N
Sbjct: 125 YQIQPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGI-RVCIKIN 183
Query: 578 HRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVK 637
+R +L G+ EI G ++K I +IDKLDK + + KE+ EKG+S E ++
Sbjct: 184 NRKILTGIAEIIG-EADKIVDITVAIDKLDKIGLDNVNKELA-EKGISEEAIAKL----- 236
Query: 638 ERGSPLVLLS-----KLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLA 692
P++LLS KL ++ ++ + +++ E + L+ +++ DL+LA
Sbjct: 237 ---QPIILLSGTNTEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLA 293
Query: 693 RGLDYYTG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 741
RGL+YYTG +GSI GGRYDNL G+FG V VG+S G +R+F ++ Q+
Sbjct: 294 RGLNYYTGAIFEVKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQL 353
Query: 742 QKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARE 799
+ + + TQ+L G+K + ++S+ A ++AE + K+ K + A
Sbjct: 354 ELYPKEAVNG--TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANV 411
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFV 837
IP++ IVGE E+NEG LKN+++ ++++++ +
Sbjct: 412 KNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEELI 449
>sp|A6KXA6|SYH_BACV8 Histidine--tRNA ligase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=hisS PE=3 SV=1
Length = 454
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 242/453 (53%), Gaps = 64/453 (14%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKLI 489
P +PKGTRDF+ +MA R F+ I +VF G ++TP E TLMGKYG E KL+
Sbjct: 5 PGIPKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLMGKYGDEGDKLL 64
Query: 490 YDLADQG--------------------GELC--SLRYDLTVPFARYVAMNG---LTSFKR 524
+ + + G + C LRYDLTVPFARYV M+ FKR
Sbjct: 65 FKIQNSGDYFNGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEISFPFKR 124
Query: 525 HQIAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLN 577
+QI V+R D P KGRYREFYQCD D+ + E+V+++ + + + IK+N
Sbjct: 125 YQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRVFGKFGV-RVSIKIN 183
Query: 578 HRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVK 637
+R +L G+ EI G ++K I +IDKLDK E + E+ KG+ E D++
Sbjct: 184 NRKILTGIAEIIG-EADKIVDITVAIDKLDKIGLENVNAELA-SKGIPQEAIDKL----- 236
Query: 638 ERGSPLVLLSKLRQEG----SLFLENSSAKL-ALDDLEILFQALEKSKCIDKVVFDLSLA 692
P++LLS +E L S A L +++ E + + + +V DL+LA
Sbjct: 237 ---QPIILLSGSNEEKLETLKTVLATSEAGLKGVEESEFILKTVSALGVKSEVELDLTLA 293
Query: 693 RGLDYYTG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 741
RGL+YYTG +GSI+ GGRYDNL G+FG + VG+S G +R+F ++ Q+
Sbjct: 294 RGLNYYTGAIFEVKALDVQIGSISGGGRYDNLTGVFGMDGMSGVGISFGADRIFDVLNQL 353
Query: 742 QKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARE 799
+ + TE +L GDK +++++ A V+AE Y K+ K + A +
Sbjct: 354 DLYPKEAVNGTE--LLFVNFGDKEAAYCLPILTKVREAGVRAEIYPDASKMKKQMGYAND 411
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVIS 832
+IP++ IVGE E+NEG + LKN+ T ++ +++
Sbjct: 412 KQIPFVAIVGENEMNEGKLTLKNMTTGEQSLVT 444
>sp|A6LIF7|SYH_PARD8 Histidine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=hisS PE=3 SV=1
Length = 451
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 247/459 (53%), Gaps = 64/459 (13%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLI 489
P +PKGTRDF+ E+MA R F+ I EVF +G ++TP E TLMGKYGE+ KL+
Sbjct: 4 PSIPKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGDKLL 63
Query: 490 YDLADQG--------------------GELC--SLRYDLTVPFARYVAM--NGLT-SFKR 524
+ + + G + C LRYDLTVPFARYV N ++ FKR
Sbjct: 64 FKILNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISFPFKR 123
Query: 525 HQIAKVYRRDNPSKGRYREFYQCDFD-------IADFEVVKILTELLNELDIGDYEIKLN 577
+QI V+R D P KGRYREFYQCD D I + E+++I+ E+ + I IK+N
Sbjct: 124 YQIQPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGI-RVCIKMN 182
Query: 578 HRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVK 637
+R +L G+ EI G ++K I +IDKLDK + + +E+ KGL E +R+ +
Sbjct: 183 NRKILSGIAEIIG-EADKIVDITVAIDKLDKIGLDNVNEEL-RSKGLPEEAIERLQPIIM 240
Query: 638 ERGSPLVLLSKLRQEGSLFLENSSAKL-ALDDLEILFQALEKSKCIDKVVFDLSLARGLD 696
+GS ++ L++ L S L + +L+ + + + + ++ DL+LARGL+
Sbjct: 241 LQGSNQEKIATLKK----VLSASETGLKGVAELDFILERISHTSIRAELELDLTLARGLN 296
Query: 697 YYTG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKER 745
YYTG +GSI GGRYDNL G+FG + V VG S G +R+F ++ Q+
Sbjct: 297 YYTGAIFEVKALDVQIGSITGGGRYDNLTGVFGMEGVSGVGFSFGADRIFDVLNQLDLYP 356
Query: 746 NQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARE 799
++ TQ+L G K LP L++++ A ++ E Y K+ K + A
Sbjct: 357 EGSLKT--TQLLFVNFGQKEEIHLLP----LIAKVRKAGIRTELYPESTKMKKQMGYADA 410
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVE 838
KIP++ IVGE E+ E + LKN+ T ++ +++ +E
Sbjct: 411 KKIPFVAIVGENEMAENKINLKNMLTGEQTLVTIEELIE 449
>sp|B6YS23|SYH_AZOPC Histidine--tRNA ligase OS=Azobacteroides pseudotrichonymphae
genomovar. CFP2 GN=hisS PE=3 SV=1
Length = 458
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 239/456 (52%), Gaps = 56/456 (12%)
Query: 433 LPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLIYD 491
+PKGTRDF +M R F I VF +G ++TP E TL+GKYGE++ KL++
Sbjct: 6 IPKGTRDFTPCEMDKRNYIFDTIRSVFYLYGFKQIETPALENLSTLLGKYGEENDKLLFK 65
Query: 492 LADQGGELC----------------------SLRYDLTVPFARYVAM--NGLT-SFKRHQ 526
+ + G + LRYDLT+P AR+V M N +T FKR Q
Sbjct: 66 ILNSGDFISKVNPIDWNNHQLSKLTKQISKKGLRYDLTLPLARFVVMHRNEITFPFKRFQ 125
Query: 527 IAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLNHR 579
I V+R D P KGRYREF QCD DI + E+++I+ E+ + L I IK+N+R
Sbjct: 126 IQPVWRSDRPQKGRYREFVQCDADIVGSDSLLNEVELIQIIDEVFHRLSIS-ISIKINNR 184
Query: 580 LLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKER 639
+L+G+ EI +K I +++DKLDK ++ +E++ +KG+S++ D++ F +
Sbjct: 185 KILNGIAEIIS-EEKKITDITTAMDKLDKVGLTKVNEELL-QKGISIQAIDQLQPFFLLK 242
Query: 640 GSPLVLLSKLRQEGSLFLENSSAKL-ALDDLEILFQALEKSKCIDKVVFDLSLARGLDYY 698
GS +S L+ L S + L ++E +F L + + FDL+LARGL+YY
Sbjct: 243 GSNQNKISTLKN----ILSTSPIGIKGLQEIETIFNKLNLIPTRNTIKFDLTLARGLNYY 298
Query: 699 TG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQ 747
TG +GS+ GGRYDNL +FG + VG+S G +R+F I+ Q+ N
Sbjct: 299 TGTIFEVKCLNVPIGSVLGGGRYDNLTNIFGLSNLSGVGISFGADRIFDILNQLNLYPNT 358
Query: 748 IIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVHK-KVMKLIDRARESKIPWM 805
A+ TQ+L LG+K + ++ L + AE H K+ K + A ++IP++
Sbjct: 359 --NASHTQILFVNLGEKGVDFILPVLFSLRKVGINAELYPHNTKIKKQLSYAHNNQIPFV 416
Query: 806 VIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 841
IVG E+ E + +K++ + + I+ + Q
Sbjct: 417 AIVGSTEIAENKITIKDMRSCSQFSIALDKLINFFQ 452
>sp|Q11RN9|SYH_CYTH3 Histidine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406
/ NCIMB 9469) GN=hisS PE=3 SV=1
Length = 453
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 233/442 (52%), Gaps = 59/442 (13%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKLI 489
P LPKGTRDF QM R+ I E+F ++G + ++TP E L GKYG E +LI
Sbjct: 4 PSLPKGTRDFGPAQMLKRQYLLQTIREIFTKYGFLPIETPAMENLSVLTGKYGDEGDQLI 63
Query: 490 YDLADQGGELC---------------------SLRYDLTVPFARYVAMNG---LTSFKRH 525
Y + + G + +LRYDLTVPFAR+V MN FKR+
Sbjct: 64 YKILNSGDFIQGVEQNHLQEGYKKLIPKISKKALRYDLTVPFARHVVMNRNDITFPFKRY 123
Query: 526 QIAKVYRRDNPSKGRYREFYQCDFDI-------ADFEVVKILTELLNELDIGDYEIKLNH 578
QI V+R D P KGRY EF QCD D+ + E+V ++ E L I D+ +K+N+
Sbjct: 124 QIQPVWRADRPQKGRYCEFMQCDADVVGTDSLLCEAEIVLMIHEAFAALGITDFVVKINN 183
Query: 579 RLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKE 638
R +L G+ + G + +C +IDKLDK E + +E+ + KG + R+
Sbjct: 184 RKILSGIADAIGKEGSE-AELCVAIDKLDKIGKEAVLEEL-KTKGFTDSQLTRLLPVFDL 241
Query: 639 RGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVV-FDLSLARGLDY 697
+G+ + LR ++ ++S +D+LE +F +EKS + + DL+LARGL Y
Sbjct: 242 KGNNAEIFPLLR---TILAQSSVGLKGIDELEKVFTLIEKSGLGNASIETDLTLARGLSY 298
Query: 698 YTG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERN 746
YTG +GS+ GGRYDNL G+FG V VG+S GI+R++ +M ++ +
Sbjct: 299 YTGAIFEVKILNVQMGSVCGGGRYDNLTGVFGLPNVSGVGISFGIDRIYDVMNELNLFPS 358
Query: 747 QIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESK 801
Q + T++L+ + LP+ +L ++ N ++ Y K+ K + A + K
Sbjct: 359 Q--ESNSTRLLICAFDENTFMHALPMVTKLRAQGINTEL---YPDPVKIKKQLSYADDKK 413
Query: 802 IPWMVIVGERELNEGIVKLKNI 823
IP+ +++GE E+N+G+ LKN+
Sbjct: 414 IPFALLIGEDEMNQGLYSLKNL 435
>sp|Q7MTB3|SYH_PORGI Histidine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=hisS PE=3 SV=1
Length = 454
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 240/447 (53%), Gaps = 54/447 (12%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLI 489
P +PKG RDF+ +M+ R F I EV++ G ++TP EM TLMGKYGE+ +L+
Sbjct: 4 PSIPKGMRDFSPVEMSRRNYIFDTIREVYELFGFNQIETPTMEMLSTLMGKYGEEGDRLL 63
Query: 490 YDLADQG---GELCS-------------------LRYDLTVPFARYVAM--NGLT-SFKR 524
+ + + G + C+ LRYDLTVPFARYV M N + FKR
Sbjct: 64 FKVLNSGDVLADFCAEELAEKNSLRFAAKACEKGLRYDLTVPFARYVVMHRNEINFPFKR 123
Query: 525 HQIAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLN 577
+QI V+R D P KGRYREFYQCD D+ + E+++I++E+ L I I LN
Sbjct: 124 YQIQPVWRADRPQKGRYREFYQCDGDVIGSDSLMNEVELIQIISEVFRRLGI-RTRILLN 182
Query: 578 HRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVK 637
+R +L G+ E+ +++ I +IDKLDK +++ E+ KG E +R+ F++
Sbjct: 183 NRKILSGIAEVVD-EADRLTDITVAIDKLDKIGLDKVNDEL-RTKGFGEEAIERLRPFIE 240
Query: 638 ERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDY 697
+G L +L+ S + + +++L + +E+ + +++ D+SLARGL Y
Sbjct: 241 MKGDNREKLDRLK---SALASSETGLKGIEELTYILDKVERVQLHSELMVDISLARGLSY 297
Query: 698 YTG-----------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERN 746
YTG +GSI GGRYDNL G+FG + + VG+S G +R++ +M Q+
Sbjct: 298 YTGAILEVKALDAEMGSITGGGRYDNLTGIFGLEGMSGVGISFGADRIYDVMMQLDLFPA 357
Query: 747 QIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPW 804
+ + T TQ+L V + L+ +L ++ E Y K+ K + A + IP+
Sbjct: 358 E--KLTGTQLLFVNFSEEDADSLLPLIQKLREQGLRTELYPEPAKIKKQMSYANAANIPY 415
Query: 805 MVIVGERELNEGIVKLKNIDTTQEEVI 831
+ +VGE E G V LKN+ T +++++
Sbjct: 416 VALVGENERAAGQVNLKNMLTGEQQML 442
>sp|A0M0E2|SYH_GRAFK Histidine--tRNA ligase OS=Gramella forsetii (strain KT0803) GN=hisS
PE=3 SV=1
Length = 456
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 239/449 (53%), Gaps = 61/449 (13%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKLI 489
P +PKGTRDF+ E++A R F+ I FK G ++TP FE TLMGKYG E +LI
Sbjct: 5 PSIPKGTRDFSPEEVAKRNYIFNTIQTEFKGFGFQPIETPSFENSSTLMGKYGDEGDRLI 64
Query: 490 YDLADQGGEL----------------------CSLRYDLTVPFARYVAMNGLT---SFKR 524
+ + + G L +LRYDLTVPFARYV + FKR
Sbjct: 65 FKILNSGDFLKKADKDALANSDSLKLTSSISEKALRYDLTVPFARYVVQHQNEIEFPFKR 124
Query: 525 HQIAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLN 577
+QI V+R D P KGR+REF+QCD D+ + E V++ + N+L + IK+N
Sbjct: 125 YQIQPVWRADRPQKGRFREFFQCDADVVGSNSLWQEVEFVQLYDAVFNKLGLEGVTIKIN 184
Query: 578 HRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVK 637
+R +L G E+ G +K ++DKLDK E +KKEM EKG+S E ++I
Sbjct: 185 NRKVLSGFAEVIG-EQDKLIDFTVALDKLDKIGEEGVKKEM-REKGISEEALNKIQPIFN 242
Query: 638 ERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSK-CIDKVVFDLSLARGLD 696
G+ K+ ++ + + + +++L+ + A+E+ + K+ D++LARGL+
Sbjct: 243 LNGN---FAEKIEGLKTILEGSETGQKGIEELQFIQNAIEEMPLSVAKLDLDVTLARGLN 299
Query: 697 YYTG------------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKE 744
YYTG +GSI GGRYD+L G+FG K + +G+S G++R++ ++E++
Sbjct: 300 YYTGAIFEVAAPENVKMGSIGGGGRYDDLTGIFGLKDMSGIGISFGLDRIYLVLEEL--- 356
Query: 745 RNQIIRAT---ETQVLVGLLGDKLPL-AAELVSELWNAKVKAE-YMVHKKVMKLIDRARE 799
+ AT T+VL G+K L A + V L + AE Y K+ K + A +
Sbjct: 357 --GLFPATVTENTKVLFINFGEKEALYAMKAVKRLREENIIAELYPDSAKMGKQMKYADK 414
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQE 828
IP++V+ GE E+N+ LK++ + ++
Sbjct: 415 RSIPYVVLAGEEEINDKKFTLKHMKSGEQ 443
>sp|Q9YEB2|SYH_AERPE Histidine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=hisS PE=3
SV=2
Length = 435
Score = 225 bits (574), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 188/327 (57%), Gaps = 32/327 (9%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGE--DSKL 488
P+ P+G RDF E M +R++ S + VF+ +G LDTP E ETL GKYGE +S+L
Sbjct: 6 PRPPRGFRDFPPEVMILRKRLLSRLERVFESYGFDPLDTPAVEYWETLSGKYGEEAESRL 65
Query: 489 IYDLADQ-GGELCSLRYDLTVPFARYVAMN-GLT-SFKRHQIAKVYRRDNPSKGRYREFY 545
I+ D G +LRYDLTVP AR+VA N GL FKR+ I KV+R + P KGRYREF
Sbjct: 66 IWRFQDPWSGRWYALRYDLTVPLARFVASNPGLPMPFKRYHIGKVWRHEEPQKGRYREFV 125
Query: 546 QCDFDI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRT 598
QCD DI AD E+V + + ++ L + + +++N R LL G+ E + +
Sbjct: 126 QCDADIVGSPYPEADAEIVSLAVDSIDALGLPGFRVRVNDRRLLAGVFE-EELGFDNPLP 184
Query: 599 ICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLE 658
I +IDKLDK E +++E+ E GL T +RI + RG P +L +R+ +
Sbjct: 185 IYRAIDKLDKIGVEGVRREL-ERLGLPGSTVERIMEIISWRGRPGEVLESVRRG---YGS 240
Query: 659 NSSAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG-----------VGSIAAG 707
N + ALD LE + + +V D+SL RGLDYYTG +GS+A G
Sbjct: 241 NEKVREALDHLEEMLSLADDK----RVELDMSLVRGLDYYTGPILEVVLDEPRIGSVAGG 296
Query: 708 GRYDNLIGMFGTKQVPAVGVSLGIERV 734
GRYD L+GMF + +PA GVS+GIER+
Sbjct: 297 GRYDGLVGMFAGRDIPATGVSIGIERI 323
>sp|Q7NHH9|SYH_GLOVI Histidine--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421)
GN=hisS PE=3 SV=1
Length = 467
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 237/466 (50%), Gaps = 64/466 (13%)
Query: 436 GTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLIYDLAD 494
GTRDF ++M RE + +F+++G L+TP E ETL GKYGE+ KLIY +
Sbjct: 9 GTRDFLPDEMIRREYVIDTLKTIFRKYGFEPLETPAIERWETLAGKYGEEGEKLIYHVVS 68
Query: 495 QG-------GELC--SLRYDLTVPFARYVAMNG-----------------LTSFKRHQIA 528
G GE +LRYDLTVP AR V M G FKR+QI
Sbjct: 69 SGSLGTLKAGERTEHALRYDLTVPLARVVGMYGDQMVADPADPKKQTRRLPRPFKRYQIQ 128
Query: 529 KVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKILTELLNELDIGDYEIKLNHRLL 581
V+R D P +GRYREF+QCD D+ + E++ + E L D+ +K+NHR L
Sbjct: 129 PVWRGDRPGEGRYREFHQCDADVVGSTSPLVETELIALTVEAFKALGFADFTVKINHRQL 188
Query: 582 LDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGS 641
L G++E G+ K T+ +SIDKLDK E+++ E+ KGL+ + D + + G+
Sbjct: 189 LKGLIEQAGIAPTKEATVLTSIDKLDKLPPEKVRLELA-GKGLNADQLDALFQVIALEGT 247
Query: 642 PLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCIDKVVF--DLSLARGLDYYT 699
+L R SL + +A+ + +L L LE + +D + DL+LARGLDYYT
Sbjct: 248 SEQVLEGAR---SLLAGSEAAQRGIGELTKLLHYLE-ALGVDSAYYRIDLALARGLDYYT 303
Query: 700 G----------VGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQ 747
G VGS+ AGGRYD LI G +PA G S G++R+ M+Q+ +
Sbjct: 304 GTIFETVSAAKVGSVGAGGRYDRLIYDLSGGKADLPACGTSFGLDRILAAMDQLGLFAS- 362
Query: 748 IIRATETQVLVGLLGDK--LPLAAELVSELWNAKVKAEYMVHKK------VMKLIDRARE 799
+ RA E VLV GD + ELV L A V+AE H++ + + + A E
Sbjct: 363 LRRAGE--VLVLHFGDPGVSQVCFELVRGLREAGVRAELGYHEEPFTPNGMRQQLGYANE 420
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLN 845
+ VIVG E+ +G L+++ T ++E I + + I RL
Sbjct: 421 KGFAYAVIVGPDEMAQGQAALRDLTTRRQEKIPLATAGQLIAGRLR 466
>sp|A5F9R5|SYH_FLAJ1 Histidine--tRNA ligase OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=hisS PE=3 SV=1
Length = 475
Score = 219 bits (558), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 240/464 (51%), Gaps = 73/464 (15%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLI 489
P +PKGTRDF+ +++ R+ I F++ G ++TP FE +TLMGKYGE+ +LI
Sbjct: 5 PSIPKGTRDFSPAEVSKRQYIIQTIKANFEKFGFQPIETPSFENSDTLMGKYGEEGDRLI 64
Query: 490 YDLADQG--------------------------------------GELC--SLRYDLTVP 509
+ + + G G++ +LRYDLTVP
Sbjct: 65 FKILNSGNFFYNKSKIELPESIEELQLNSAEKITLEQRIELNKFTGKISEKALRYDLTVP 124
Query: 510 FARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQCDFDIA-------DFEVVKI 559
FARYV + FKR+QI V+R DNP KGR+REF+QCD D+ + E+V++
Sbjct: 125 FARYVVQHQSEIEFPFKRYQIQPVWRADNPQKGRFREFFQCDADVVGSKSLWQEVELVQL 184
Query: 560 LTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSSIDKLDKQSFEQIKKEMV 619
+ L + IK+N+R +L G+ E+ G S+K ++DKLDK + +KKEM+
Sbjct: 185 YDTVFTSLGLEGVTIKINNRKILSGIAEVIGA-SDKLIDFTVALDKLDKIGEDGVKKEMI 243
Query: 620 EEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKS 679
E KG+S + ++ G+ K+ Q L + +++L+ + +
Sbjct: 244 E-KGISEDALVKVQPLFNFSGT---FADKIAQLSDLLSSSEEGMKGVEELKFICDNVADL 299
Query: 680 KCIDKVV-FDLSLARGLDYYTG------------VGSIAAGGRYDNLIGMFGTKQVPAVG 726
V+ D++LARGL+YYTG +GSI GGRYD+L G+FG K + VG
Sbjct: 300 GLSTAVLDLDVTLARGLNYYTGAIFEVAAPKTVAMGSIGGGGRYDDLTGIFGLKNMSGVG 359
Query: 727 VSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAE-Y 784
+S G++R++ ++E++Q + + AT + + GDK L A++ + +L +K E Y
Sbjct: 360 ISFGLDRIYLVLEELQL-FPETVAATSKAIFLN-FGDKEALYASKAIQKLRQENIKVELY 417
Query: 785 MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 828
+ KV K A + IP+ V+VG++E+N LKN+ T ++
Sbjct: 418 PDNVKVGKQFQYADKRLIPFAVLVGDQEINSNSYALKNLVTGEQ 461
>sp|Q7UZ20|SYH_RHOBA Histidine--tRNA ligase OS=Rhodopirellula baltica (strain SH1)
GN=hisS PE=3 SV=1
Length = 442
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 229/446 (51%), Gaps = 46/446 (10%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS-KLI 489
P+ KG RD+ M RE+ EVF+ G +DTP E E L GK +++ + +
Sbjct: 4 PRTLKGFRDYLPAAMIPREQLMQTAREVFRSFGFAPIDTPTLEHLEILTGKGSDETDRQL 63
Query: 490 YDLADQGGELCSLRYDLTVPFARYVAMN-GL--TSFKRHQIAKVYRRDNPSKGRYREFYQ 546
Y D GG +R+DLTVP AR+ A + G T FKR+ IA V+R + P +GRYREF Q
Sbjct: 64 YSFEDNGGRPVGMRFDLTVPLARFAAQHIGTLGTPFKRYHIAPVWRGEKPQEGRYREFVQ 123
Query: 547 CDFD-------IADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTI 599
CDFD +AD E V ++ LL + I + I +N+R +L G+LE G+ ++K +
Sbjct: 124 CDFDTIGTTSELADIEAVCVIDALLRAIGIDAFTISINNRAILTGLLESLGL-ADKTTPV 182
Query: 600 CSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLEN 659
S+DKL K E+ EMVE G++ E AD + + G +L+ L + + N
Sbjct: 183 LRSLDKLGKIGREKTANEMVESAGVTAEQADAVLRLAECDGDAESILASLPE---ITGGN 239
Query: 660 SSAKLALDDLEILFQ-ALEKSKCIDKVVFDLSLARGLDYYTGV------------GSIAA 706
+A ++ L +++ AL D++ D+S+ARGLDYYTGV GS+ +
Sbjct: 240 ETAAAGIERLTQIYRGALASGVSPDRLKIDVSIARGLDYYTGVIFETTLDELPGIGSVCS 299
Query: 707 GGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV-----GLL 761
GGRYDNL G++ + +P +G SLG++R+ +E + + + V V G
Sbjct: 300 GGRYDNLAGLYTKQHLPGIGASLGLDRLLAALESLGRLSGV---SKPCAVFVPFFDKGHR 356
Query: 762 GDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKL 820
D L LA S+L +A + E Y KK+ + + A +I G E G V++
Sbjct: 357 DDYLKLA----SQLRDAGIGVEVYPEPKKLGQQLKYADSQGFAVAIIAGGNEWEAGAVQV 412
Query: 821 KNIDTTQEEVISRSN-----FVEEIQ 841
K + T + + ++ S+ +E IQ
Sbjct: 413 KTLATKESQDVAYSHESPDALIEAIQ 438
>sp|B1L6B4|SYH_KORCO Histidine--tRNA ligase OS=Korarchaeum cryptofilum (strain OPF8)
GN=hisS PE=3 SV=1
Length = 428
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 184/325 (56%), Gaps = 34/325 (10%)
Query: 433 LPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGEDS--KLIY 490
+P+G RDF M +R++ S I E+F+R+G ++TP E ET+ GK GE++ KL++
Sbjct: 4 IPRGFRDFPPPMMILRKRVLSKIEEIFRRYGFDPIETPSLEYWETVKGKLGEEAENKLMF 63
Query: 491 DLADQ-GGELCSLRYDLTVPFARYVAMNGLTS--FKRHQIAKVYRRDNPSKGRYREFYQC 547
D E +LRY+LT P ARYVAM+ T FKR+ I V+R + P KGRYREF QC
Sbjct: 64 IFPDFFSKEWYTLRYELTFPLARYVAMHPETPLPFKRYHIGNVWRHEEPQKGRYREFLQC 123
Query: 548 DFDI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTIC 600
D DI AD EV+ + + + D ++ ++LN R LL G+ E + F I
Sbjct: 124 DADIVGSPYPEADAEVISVNIDAMKSFDFENFRVRLNDRRLLTGVFEEELGINNPF-PIY 182
Query: 601 SSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENS 660
+IDKLDK + +K E+ G RI + RGS + + R+ +EN
Sbjct: 183 RAIDKLDKIGVDGVKGELAR-LGAHESLIGRIMELISTRGSFNEISNTFRR-----IEND 236
Query: 661 SAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG-----------VGSIAAGGR 709
K+ALD LE +F + D++VFDLSL RGLDYYTG +GS+A GGR
Sbjct: 237 KVKVALDHLEEIFSIVSD----DRLVFDLSLVRGLDYYTGPVFETSVSEPRIGSLAGGGR 292
Query: 710 YDNLIGMFGTKQVPAVGVSLGIERV 734
YD LIG++ K VPA GVSLG+ER+
Sbjct: 293 YDRLIGLYSGKDVPATGVSLGVERL 317
>sp|Q892X7|SYH_CLOTE Histidine--tRNA ligase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=hisS PE=3 SV=1
Length = 439
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 232/429 (54%), Gaps = 35/429 (8%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKLI 489
P + G + V K I +++ G + LDTP E E L+ K G E K I
Sbjct: 8 PSILPGFMELLPADQIVFNKMKDTIRHNYEKFGFIPLDTPTIEKSEILLAKGGGETEKQI 67
Query: 490 YDLADQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQ 546
Y ++G SLR+DLTVP ARYV+ + F+R+ I+KV+R + KGR+REFYQ
Sbjct: 68 YRF-NKGNTDLSLRFDLTVPLARYVSQHFSDLNFPFRRYHISKVFRGERNQKGRFREFYQ 126
Query: 547 CDFD---------IADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR 597
CD D I D E+ I+ + EL D+ I++N+R +L+G E G E +
Sbjct: 127 CDIDIIGNGSLSIINDAEIPSIIYQTFKELGFEDFTIRINNRKVLNGFFE--GTDVEDRK 184
Query: 598 TICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFL 657
+ +IDK++K + ++KE+ +E GL D+I F+ +G+ ++ L++ L +
Sbjct: 185 GVLRAIDKIEKIGEDGVRKEL-QELGLEDSKIDKIINFINIKGTKSEVIKSLKE---LDI 240
Query: 658 ENSSAKLALDDLEILFQALEKSKCIDK-VVFDLSLARGLDYYTG------------VGSI 704
EN K + +LE + ++ DK DL++ARGLDYYTG +GS+
Sbjct: 241 ENDVFKEGVYELEKVVHYIKSFNVPDKNYKIDLTIARGLDYYTGTVYETVLNNYPQIGSV 300
Query: 705 AAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK 764
+GGRYDNL + +++P VG+S+G+ R+F + + K + +T +Q LV +GD
Sbjct: 301 CSGGRYDNLAEHYTNQKLPGVGISIGLTRLFYQLRE-AKIIGENASSTLSQALVIPVGDT 359
Query: 765 LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 823
+ + ++ ++L ++ +E Y+ K+ K A + KIP+++++GE EL E V +KN+
Sbjct: 360 MEYSIKVANKLRENEIISELYLEDAKIGKKFAYADKLKIPYVILIGEDELKEEKVSVKNM 419
Query: 824 DTTQEEVIS 832
+T +E +S
Sbjct: 420 ETGNQESMS 428
>sp|P62367|SYH1_BACC1 Histidine--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 10987)
GN=hisS1 PE=3 SV=1
Length = 436
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 225/420 (53%), Gaps = 49/420 (11%)
Query: 435 KGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG---EDSKLIYD 491
KGT+D+ E+ +R K + F+R+G L+TP M E + KYG E K IY
Sbjct: 7 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 66
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDF 549
L DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD
Sbjct: 67 LQDQGKRNLALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDV 126
Query: 550 DI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSS 602
DI A+ E++ + EL L++ + I+ N+R LL+G+LE +P+E+ + S
Sbjct: 127 DIVGVESVMAEAELMSMAFELFRTLNL-EVTIQYNNRKLLNGILESINIPTERTSDVILS 185
Query: 603 IDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSA 662
+DK++K + ++K+++ E+G+S E AD I V LS L+ + F E +
Sbjct: 186 LDKIEKIGIDGVRKDVL-ERGISEEMADTICNTV---------LSCLKLTIADFKEAFNN 235
Query: 663 KLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------VGSIAAG 707
L D +L+ L Q L + +F+ LARGL YTG SI +G
Sbjct: 236 PLVADGVNELQQLQQYLIALGINENAIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSG 295
Query: 708 GRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL 765
GRYDN+IG F P VG+S G++ ++T + Q + I +T V + LG +L
Sbjct: 296 GRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETISST-ADVFIIPLGTEL 349
Query: 766 PL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 823
A+ + + KV+ E + +K+ + ++ A + IP+++I+GE EL+ V L+N+
Sbjct: 350 QCLQIAQQLRSTTSLKVELE-LAGRKLKRALNYANKENIPYVLIIGEDELSTETVVLRNM 408
>sp|B2FPL6|SYH_STRMK Histidine--tRNA ligase OS=Stenotrophomonas maltophilia (strain
K279a) GN=hisS PE=3 SV=1
Length = 464
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 243/469 (51%), Gaps = 65/469 (13%)
Query: 431 PKLPKGTRDF-AKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKL 488
P+ P GT + +EQ+A ++ +I ++R G + ++TPVFE+ + L+ K G E +
Sbjct: 4 PRTPPGTLELLPREQIAF-QRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQ 62
Query: 489 IYDLADQGG------------ELCSLRYDLTVPFARYVAMNG--LT-SFKRHQIAKVYRR 533
+Y + G +LR+DLTVP ARYVA + LT F+R+Q+ +VYR
Sbjct: 63 VYFVQSTGALANAAESGDRSLPEMALRFDLTVPLARYVAEHEHELTFPFRRYQMQRVYRG 122
Query: 534 DNPSKGRYREFYQCDFDI---------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDG 584
+ +GR+REFYQCD D+ D EV+ ++ + +EL IGD+ I+LN+R L+ G
Sbjct: 123 ERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRKLMRG 182
Query: 585 MLEICGVP-SEKFRTICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKER--- 639
E GV E+ + +DKLDK+ + +++ +V E + E ++I FV R
Sbjct: 183 FFESLGVAEGERQLAVLREVDKLDKRGADYVRETLVGEGFEIPAEQVEKILAFVAVRSQG 242
Query: 640 -GSPLVLLSKLRQEG--SLFLENSSAKLALDDLEILFQAL---EKSKCIDKVVFDLSLAR 693
L L+ L + S L A+ L ++ L QAL E + C+ + S+AR
Sbjct: 243 HADALAQLATLEADAGSSEILRTGVAE--LREVLQLVQALGVPETAYCL-----NFSIAR 295
Query: 694 GLDYYTG------------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI 741
GLDYYTG +GSI +GGRY++L + ++P VG+S+G+ R+F +
Sbjct: 296 GLDYYTGTVYETTLTDHPQIGSICSGGRYEDLASHYSKSKLPGVGISIGLSRLFWQL--- 352
Query: 742 QKERNQI--IRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRA 797
+E I I + Q LV L+ ++ +P + ++ L + E M KK+ K A
Sbjct: 353 -REAGLIDGIEGSSVQALVALMDEQGMPQSLDIARRLRAGGINTEVQMEPKKIGKQFQYA 411
Query: 798 RESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
++ I ++V+ GE EL G+V +K++ Q+ +SR +Q L Q
Sbjct: 412 AKAGIRFVVLAGEDELARGVVAVKDLLREQQFEVSRDGLASTLQVELEQ 460
>sp|Q81B71|SYH1_BACCR Histidine--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=hisS-1 PE=3 SV=1
Length = 426
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 224/420 (53%), Gaps = 49/420 (11%)
Query: 435 KGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG---EDSKLIYD 491
KGT+D+ E+ +R K + F+R+G L+TP M E + KYG E K IY
Sbjct: 8 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 67
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDF 549
L DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD
Sbjct: 68 LQDQGKRELALRYDLTIPFAKVVAMNPNLRLPFKRYEIGKVFRDGPIKQGRFREFIQCDV 127
Query: 550 DI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSS 602
DI A+ E++ + EL L++ + I+ N+R LL+G+LE +P+E + S
Sbjct: 128 DIVGVESVMAEAELMAMAFELFRTLNL-EITIQYNNRKLLNGILESINIPTELTSDVILS 186
Query: 603 IDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSA 662
+DK++K + ++K+++ E+G+S E AD I V LS L+ + F E +
Sbjct: 187 LDKIEKIGIDGVRKDVL-ERGISEEMADTICNTV---------LSCLKLTIADFKEAFNN 236
Query: 663 KLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------VGSIAAG 707
L D +L+ L Q L + +F+ LARGL YTG SI +G
Sbjct: 237 PLVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYEIFLKDRSITSSIGSG 296
Query: 708 GRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL 765
GRYDN+IG F P VG+S G++ ++T + Q + I +T V + LG +L
Sbjct: 297 GRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETISST-ADVFIIPLGTEL 350
Query: 766 PL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 823
A+ + + KV+ E + +K+ + ++ A + IP+++I+GE EL+ V L+N+
Sbjct: 351 QCLQIAQQLRSTTSLKVELE-LAGRKLKRALNYANKENIPYVLIIGEDELSTNTVVLRNM 409
>sp|Q638Q6|SYH1_BACCZ Histidine--tRNA ligase 1 OS=Bacillus cereus (strain ZK / E33L)
GN=hisS1 PE=3 SV=1
Length = 425
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 225/420 (53%), Gaps = 49/420 (11%)
Query: 435 KGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG---EDSKLIYD 491
KGT+D+ E+ +R K + F+R+G +L+TP M E + KYG E K IY
Sbjct: 7 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKSLETPTLNMYELMSYKYGGGDEILKEIYT 66
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDF 549
L DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD
Sbjct: 67 LRDQGKRELALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDV 126
Query: 550 DI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSS 602
DI A+ E++ + EL L++ + I+ N+R LL+G+LE +P+E+ + S
Sbjct: 127 DIVGVESVMAEAELMSMAFELFRTLNL-EVTIQYNNRKLLNGILESINIPTERTSDVILS 185
Query: 603 IDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSA 662
+DK++K + ++K+++ E+G+S E AD I V LS L+ F + +
Sbjct: 186 LDKIEKIGIDGVRKDVL-ERGISEEMADTICNTV---------LSCLKLSIDDFKDAFNT 235
Query: 663 KL---ALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------VGSIAAG 707
L +++L+ L Q L + +F+ LARGL YTG SI +G
Sbjct: 236 PLVAEGVNELQQLQQYLIALGINENAIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSG 295
Query: 708 GRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL 765
GRYDN+IG F P VG+S G++ ++T + Q + I +T + + +G +L
Sbjct: 296 GRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETISST-ADIFIIPIGTEL 349
Query: 766 PL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 823
A+ + + KV+ E + +K+ + ++ A + IP+++I+GE EL+ L+N+
Sbjct: 350 QCLQIAQQLRSTTSLKVELE-LTGRKLKRALNYANKENIPYVLIIGEEELSTETAMLRNM 408
>sp|Q81N41|SYH1_BACAN Histidine--tRNA ligase 1 OS=Bacillus anthracis GN=hisS-1 PE=3 SV=1
Length = 425
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 224/420 (53%), Gaps = 49/420 (11%)
Query: 435 KGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG---EDSKLIYD 491
KGT+D+ E+ +R K + F+R+G L+TP M E + KYG E K IY
Sbjct: 7 KGTKDYLPEEQVLRSKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 66
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDF 549
L DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD
Sbjct: 67 LQDQGKRDLALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDV 126
Query: 550 DI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSS 602
DI A+ E++ + EL L++ + I+ N+R LL+G+L+ +P+E + S
Sbjct: 127 DIVGVESVMAEAELMSMAFELFQTLNL-EVTIQYNNRKLLNGILQAINIPTELTSDVILS 185
Query: 603 IDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSA 662
+DK++K + ++K+++ E+G+S E AD I V LS L+ + F E +
Sbjct: 186 LDKIEKIGIDGVRKDVL-ERGISEEMADTICNTV---------LSCLQLSIADFKEAFNN 235
Query: 663 KLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------VGSIAAG 707
L D +L+ L Q L + +F+ LARGL YTG SI +G
Sbjct: 236 PLVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSG 295
Query: 708 GRYDNLIGMFGTKQV--PAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL 765
GRYDN+IG F + P VG+S G++ ++T + Q + I +T V + LG +L
Sbjct: 296 GRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ-----KETISST-ADVFIIPLGTEL 349
Query: 766 PL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 823
A+ + + K++ E + +K+ + ++ A + IP+++I+GE E+ V L+N+
Sbjct: 350 QCLQIAQQLRSTTSLKIELE-LAGRKLKRALNYANKENIPYVLIIGEEEICTETVMLRNM 408
>sp|Q6HG86|SYH1_BACHK Histidine--tRNA ligase 1 OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=hisS1 PE=3 SV=1
Length = 425
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 223/420 (53%), Gaps = 49/420 (11%)
Query: 435 KGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG---EDSKLIYD 491
KGT+D+ E+ +R K + F+R+G L+TP M E + KYG E K IY
Sbjct: 7 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 66
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSKGRYREFYQCDF 549
L DQG +LRYDLT+PFA+ VAMN FKR++I KV+R +GR+REF QCD
Sbjct: 67 LQDQGKRDLALRYDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDV 126
Query: 550 DI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICSS 602
DI A+ E++ + EL L++ + I+ N+R LL+G+L+ +P+E + S
Sbjct: 127 DIVGVESVMAEAELMSMAFELFQTLNL-EVTIQYNNRKLLNGILQAIHIPTELTSDVILS 185
Query: 603 IDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLENSSA 662
+DK++K + ++K+++ E+G+S E AD I V LS L+ + F E +
Sbjct: 186 LDKIEKIGIDGVRKDVL-ERGISEEMADTICNTV---------LSCLQLSIADFEEAFNN 235
Query: 663 KLALD---DLEILFQALEKSKCIDKVVFDLSLARGLDYYTG------------VGSIAAG 707
L D +L+ L Q L + +F+ LARGL YTG SI +G
Sbjct: 236 PLVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSG 295
Query: 708 GRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL 765
GRYDN+IG F P VG+S G++ ++T + Q + + +T V + LG +L
Sbjct: 296 GRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETVSST-ADVFIIPLGTEL 349
Query: 766 PL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 823
A+ + + K++ E + +K+ + ++ A + IP+++I+GE E+ V L+N+
Sbjct: 350 QCLQIAQQLRSTTSLKIELE-LAGRKLKRALNYANKENIPYVLIIGEEEICTETVMLRNM 408
>sp|B4STN3|SYH_STRM5 Histidine--tRNA ligase OS=Stenotrophomonas maltophilia (strain
R551-3) GN=hisS PE=3 SV=1
Length = 465
Score = 192 bits (489), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 242/467 (51%), Gaps = 61/467 (13%)
Query: 431 PKLPKGTRDF-AKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKL 488
P+ P GT + +EQ+A ++ +I ++R G + ++TPVFE+ + L+ K G E +
Sbjct: 4 PRTPPGTLELLPREQIAF-QRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQ 62
Query: 489 IYDLADQGG------------ELCSLRYDLTVPFARYVAMNG--LT-SFKRHQIAKVYRR 533
+Y + G +LR+DLTVP ARYVA + LT F+R+Q+ +VYR
Sbjct: 63 VYFVQSTGALANAAESGDRSLPEMALRFDLTVPLARYVAEHEHELTFPFRRYQMQRVYRG 122
Query: 534 DNPSKGRYREFYQCDFDI---------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDG 584
+ +GR+REFYQCD D+ D EV+ ++ + +EL IGD+ I+LN+R LL G
Sbjct: 123 ERAQRGRFREFYQCDIDVIGKDSLSVRYDAEVLAVIHAVFSELRIGDFSIQLNNRNLLRG 182
Query: 585 MLEICGVP-SEKFRTICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVKERG-- 640
E GV E+ + +DKLDK+ + +++ +V E G+ E ++I FV R
Sbjct: 183 YFESLGVAEGERQLAVLREVDKLDKRGADYVRETLVGEGFGIPAEQVEKILAFVAVRSKG 242
Query: 641 -SPLVLLSKLRQEGSLFLENSSAKLA-LDDLEILFQAL---EKSKCIDKVVFDLSLARGL 695
+ + + E A +A L ++ L QAL E + C+ + S+ARGL
Sbjct: 243 HDDALAQLAALEAAAESSETLRAGVAELREVLQLVQALGVPETAYCL-----NFSIARGL 297
Query: 696 DYYTG------------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK 743
DYYTG +GSI +GGRY++L + ++P VG+S+G+ R+F + +
Sbjct: 298 DYYTGTVYETTLTDHPQIGSICSGGRYEDLASHYSKSKLPGVGISIGLSRLFWQL----R 353
Query: 744 ERNQI--IRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARE 799
E I I A+ Q LV L+ ++ +P + ++ L + E M KK+ K A +
Sbjct: 354 EAGLIDGIEASSVQALVALMDEQGMPQSLDIARRLRAGGINTEVQMEPKKIGKQFQYAAK 413
Query: 800 SKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
+ I ++V+ GE EL G+V +K++ Q+ +SR + L Q
Sbjct: 414 AGIRFVVLAGEDELARGVVAVKDLLREQQFEVSRDELASTLLVELEQ 460
>sp|B0S168|SYH_FINM2 Histidine--tRNA ligase OS=Finegoldia magna (strain ATCC 29328)
GN=hisS PE=3 SV=1
Length = 431
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 237/441 (53%), Gaps = 43/441 (9%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKLI 489
P G + E V + I +VF ++ ++DTP E + L+ K G E SK +
Sbjct: 4 PSTLPGMMELLPEDQLVFDTIKRKIEDVFIKNAFFSIDTPAIEKLDVLLSKGGGETSKQV 63
Query: 490 YDLADQGGELCSLRYDLTVPFARYVAM---NGLTSFKRHQIAKVYRRDNPSKGRYREFYQ 546
+ + D + LR+DLTVP A+YV+M + F+R+QIAKVYR + KGRY+EFYQ
Sbjct: 64 FRI-DNSKKNQGLRFDLTVPLAKYVSMYMQDLAFPFRRYQIAKVYRGERNQKGRYKEFYQ 122
Query: 547 CDFDI---------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR 597
CD DI D E+VK + E L +D+ ++E + N+R +L+G G+ + F
Sbjct: 123 CDIDIIGNEKLSLYNDAEIVKCMYEALKSIDVPEFEFQFNNRKILNGYFSYLGI--DDFE 180
Query: 598 TICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFL 657
+ IDKLDK + +K+E+ + L D + F++ G+ ++ KL SL +
Sbjct: 181 SCLRVIDKLDKIGIDNVKEEL-SKINLDASKIDTLLKFLEIDGTNQEIIEKLE---SLNI 236
Query: 658 ENSSAKLALDDLEILFQ-ALEKSKCIDKVVFDLSLARGLDYYTG------------VGSI 704
+N +++L+ ++Q L + + +LS+ RGLDYYTG +GSI
Sbjct: 237 DNELFTCGVNELKFVYQDILSLGVNPENIKINLSITRGLDYYTGSVFETFFKDYREIGSI 296
Query: 705 AAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQ---VLVGLL 761
+GGRYD+L F ++P VG+S+G+ R+F ++++ +++ +T +++ +
Sbjct: 297 CSGGRYDSLANNFTKSKLPGVGMSIGLTRLFYQLQEL-----NLVKGKQTNFDCIIIPMK 351
Query: 762 GDKLPLAAELVSELWNAKVKA-EYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKL 820
G + A +L+++L N+ VK Y+ K+ K + A + + +++I+G+ E+ + L
Sbjct: 352 GYE-KNAVKLMNDLRNSSVKCMSYLEDDKLKKKFNYADKLSVKYVIIIGQDEVEQNKFTL 410
Query: 821 KNIDTTQEEVISRSNFVEEIQ 841
+N++ +E++ + +E+++
Sbjct: 411 RNMENGNQELLELNEIIEKLK 431
>sp|Q5WCR7|SYH2_BACSK Histidine--tRNA ligase 2 OS=Bacillus clausii (strain KSM-K16)
GN=hisS2 PE=3 SV=1
Length = 425
Score = 189 bits (480), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 232/428 (54%), Gaps = 41/428 (9%)
Query: 435 KGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG---EDSKLIYD 491
+GT+D+ E +VR + EVF+++G ++TP+ + L KYG E K +Y
Sbjct: 10 RGTQDYLPEDESVRVWLRRELEEVFQQYGCKPMETPMINYTDLLASKYGGGAEIKKEMYT 69
Query: 492 LADQGGELCSLRYDLTVPFARYVAMNG--LTSFKRHQIAKVYRRDNPSK-GRYREFYQCD 548
L D+G +LRYDLT+PFA+ +AMN FKR++I KV+R D P K GR+REF QCD
Sbjct: 70 LTDRGKRALALRYDLTIPFAKVMAMNPDIRKPFKRYEIGKVFR-DGPIKAGRFREFTQCD 128
Query: 549 FDIA-------DFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTICS 601
D+A + E++++ TE+ + + + I+ N+R LL GML+ICGV ++ +
Sbjct: 129 VDVAGVDSPLAEAELLEMATEVFRRIGL-NMTIQYNNRKLLTGMLDICGVSKDQHSAVIL 187
Query: 602 SIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERG-SPLVLLSKLRQEGSLFLENS 660
+DK +K +Q+ E+ +E G+ + +I ++K+ S +V + R + E
Sbjct: 188 ILDKREKIGDKQVVNEL-KEMGVDGKAISKIAQWLKQMSQSGIVDFATDRPTTPIMAE-- 244
Query: 661 SAKLALDDLEILFQALEKSKCIDKVVFDLSLARGLDYYTGV------------GSIAAGG 708
+ +L+ L +AL + F+ LARGL+ YTG S+ +GG
Sbjct: 245 ----GIAELQELEEALRYLNIDSQCTFNPFLARGLEIYTGTVYELFLTEGAIQSSVGSGG 300
Query: 709 RYDNLI-GMFGTKQ-VPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLP 766
RYD I G+ G +Q +P VG+S GI+ ++T + +++ NQ + ++ L K
Sbjct: 301 RYDQAISGLTGEEQPMPTVGISFGIDVIYTAL-KMEGRINQ--KPLLDYYVIPLQKQKEA 357
Query: 767 LAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTT 826
LA +V E+ +KK+ K +DRA + KIP+++++GE E+ G KLKN++T
Sbjct: 358 LAVASSLRKQGFRVDVEFK-NKKLTKALDRANKEKIPFVILIGEEEVASGRYKLKNMETG 416
Query: 827 QEEVISRS 834
E+ + S
Sbjct: 417 AEQHVPFS 424
>sp|Q8PLH2|SYH_XANAC Histidine--tRNA ligase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=hisS PE=3 SV=1
Length = 478
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/472 (30%), Positives = 233/472 (49%), Gaps = 66/472 (13%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKLI 489
P+ P G + + ++ +I ++R G + ++TPVFE+ + L+ K G E + +
Sbjct: 4 PRTPPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQV 63
Query: 490 YDLAD----------------QGG--ELCSLRYDLTVPFARYVAMNGLT---SFKRHQIA 528
Y + GG EL +LR+DLTVP ARYVA + F+R+Q+
Sbjct: 64 YFVQSTGALANAAAAADEGAENGGLPEL-ALRFDLTVPLARYVAEHEHDLSFPFRRYQMQ 122
Query: 529 KVYRRDNPSKGRYREFYQCDFDI---------ADFEVVKILTELLNELDIGDYEIKLNHR 579
+VYR + +GR+REFYQCD D+ D EV+ ++ + EL IGD++++LN+R
Sbjct: 123 RVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNR 182
Query: 580 LLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVK 637
LL G E GV + + + +DK+DK+ + ++ +V E G+ E RI FV
Sbjct: 183 KLLRGFFESLGVAEGELQLAVLREVDKIDKRGADYVRDTLVGEGFGIPAEQVARILAFVA 242
Query: 638 ER--GSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCI----DKVVFDLSL 691
R G L EGS+ +SA L + + L + LE K + + S+
Sbjct: 243 VRSNGHADALAQLQALEGSV---GASATLG-EGIAELREVLELVKALGVPESAYCLNFSI 298
Query: 692 ARGLDYYTG------------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 739
ARGLDYYTG +GSI +GGRYD+L + ++P VG+S+G+ R+F +
Sbjct: 299 ARGLDYYTGTVYETTLTDHPQIGSICSGGRYDSLASHYTKSKLPGVGISIGLTRLFWQLR 358
Query: 740 QIQKERNQIIRATETQVLVGL-----LGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLI 794
+ Q I + Q +V L L D L +A L N +V+ E KK+ K
Sbjct: 359 --EAGLIQGIAESSVQAMVALMDETRLDDALDIARRLRIGGINTEVQME---PKKIGKQF 413
Query: 795 DRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
A + I ++V+ G+ EL G+V +K++ Q+ ++R +Q L Q
Sbjct: 414 QYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVELEQ 465
>sp|Q4UU37|SYH_XANC8 Histidine--tRNA ligase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=hisS PE=3 SV=1
Length = 477
Score = 186 bits (473), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 236/474 (49%), Gaps = 70/474 (14%)
Query: 431 PKLPKGTRDF-AKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKL 488
P+ P G + +EQ+A ++ +I ++R G + ++TPVFE+ + L+ K G E +
Sbjct: 4 PRTPPGIMELLPREQIAF-QRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQ 62
Query: 489 IYDLADQG---------------GEL--CSLRYDLTVPFARYVAMNGLT---SFKRHQIA 528
+Y + G G L +LR+DLTVP ARYVA + F+R+Q+
Sbjct: 63 VYFVQSTGALANAAAAADEGAESGGLPELALRFDLTVPLARYVAEHEHELSFPFRRYQMQ 122
Query: 529 KVYRRDNPSKGRYREFYQCDFDI---------ADFEVVKILTELLNELDIGDYEIKLNHR 579
+VYR + +GR+REFYQCD D+ D EV+ ++ + EL IGD++++LN+R
Sbjct: 123 RVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNR 182
Query: 580 LLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVK 637
LL G E GV + + + +DK+DK+ E ++ + E G++ D+I FV
Sbjct: 183 KLLRGFFESLGVAEGELQLAVLREVDKIDKRGAEYVRDTLTGEGFGIATAQVDKILAFVA 242
Query: 638 ER--GSPLVLLSKLRQEGSLFLENSSAKLALDDLEILFQALEKSKCI----DKVVFDLSL 691
R G L E S+ +SA L + + L + LE K + + S+
Sbjct: 243 VRSNGHADALAQLQALEASV---GASATLG-EGIAELREVLELVKALGVPETAYCLNFSI 298
Query: 692 ARGLDYYTG------------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 739
ARGLDYYTG +GSI +GGRY+NL + ++P VG+S+G+ R+F +
Sbjct: 299 ARGLDYYTGTVYETTLTDHPQIGSICSGGRYENLASHYTKSKLPGVGISIGLTRLFWQL- 357
Query: 740 QIQKERNQIIRATETQV--LVGL-----LGDKLPLAAELVSELWNAKVKAEYMVHKKVMK 792
+E I E+ V +V L L D L +A L N +V+ E KKV K
Sbjct: 358 ---REAGLIAGIAESSVHAMVALMDESRLDDALDIARRLRIGGINTEVQME---PKKVGK 411
Query: 793 LIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
A + I ++V+ G+ EL G+V +K++ Q+ ++R +Q L Q
Sbjct: 412 QFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVELEQ 465
>sp|Q8P9P5|SYH_XANCP Histidine--tRNA ligase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=hisS PE=3
SV=1
Length = 477
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 235/475 (49%), Gaps = 72/475 (15%)
Query: 431 PKLPKGTRDF-AKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYG-EDSKL 488
P+ P G + +EQ+A ++ +I ++R G + ++TPVFE+ + L+ K G E +
Sbjct: 4 PRTPPGIMELLPREQIAF-QRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQ 62
Query: 489 IYDLADQG---------------GEL--CSLRYDLTVPFARYVAMNGLT---SFKRHQIA 528
+Y + G G L +LR+DLTVP ARYVA + F+R+Q+
Sbjct: 63 VYFVQSTGALANAAAAADEGAESGGLPELALRFDLTVPLARYVAEHEHELSFPFRRYQMQ 122
Query: 529 KVYRRDNPSKGRYREFYQCDFDI---------ADFEVVKILTELLNELDIGDYEIKLNHR 579
+VYR + +GR+REFYQCD D+ D EV+ ++ + EL IGD++++LN+R
Sbjct: 123 RVYRGERAQRGRFREFYQCDIDVIGKDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNR 182
Query: 580 LLLDGMLEICGVPSEKFR-TICSSIDKLDKQSFEQIKKEMVEEK-GLSVETADRIGTFVK 637
LL G E GV + + + +DK+DK+ E ++ + E G++ D+I FV
Sbjct: 183 KLLRGFFESLGVAEGELQLAVLREVDKIDKRGAEYVRDTLAGEGFGIAAAQVDKILAFVA 242
Query: 638 ERGS----PLVLLSKLRQEGSLFLENSSAKLALDDLEILFQAL---EKSKCIDKVVFDLS 690
R + L L L + L ++ L +AL E + C+ + S
Sbjct: 243 VRSNGHADALAQLQALETSVGASVTLGEGIAELREVLELVKALGVPETAYCL-----NFS 297
Query: 691 LARGLDYYTG------------VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM 738
+ARGLDYYTG +GSI +GGRY+NL + ++P VG+S+G+ R+F +
Sbjct: 298 IARGLDYYTGTVYETTLTDHPQIGSICSGGRYENLASHYTKSKLPGVGISIGLTRLFWQL 357
Query: 739 EQIQKERNQIIRATETQV--LVGL-----LGDKLPLAAELVSELWNAKVKAEYMVHKKVM 791
+E I E+ V +V L L D L +A L N +V+ E KKV
Sbjct: 358 ----REAGLIAGIAESSVHAMVALMDESRLDDALDIARRLRIGGINTEVQME---PKKVG 410
Query: 792 KLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 846
K A + I ++V+ G+ EL G+V +K++ Q+ ++R +Q L Q
Sbjct: 411 KQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVELEQ 465
>sp|Q7M8S6|SYH_WOLSU Histidine--tRNA ligase OS=Wolinella succinogenes (strain ATCC 29543
/ DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=hisS
PE=3 SV=1
Length = 442
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 222/425 (52%), Gaps = 43/425 (10%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGED--SKL 488
P+ G +D ++ + + ++EVF+ G + ++TP E E L+ K G D K
Sbjct: 9 PRTLSGFKDRLPQEAMAKSRLLRTVSEVFEGFGFVPIETPHLEYAEILV-KQGSDEIQKE 67
Query: 489 IYDLADQGGELCSLRYDLTVPFARYVAMN----GLTSFKRHQIAKVYRRDNPSKGRYREF 544
+Y D GG +LR+D TVP AR+++ + GL FKR+ I V+R + +GRYREF
Sbjct: 68 LYRFFDHGGRDVALRFDQTVPLARFISQHRNALGL-PFKRYAIGNVFRGERAQRGRYREF 126
Query: 545 YQCDFDI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFR 597
QCDFD +D E+++++ L L I + I +N+R +L+G+ + GV E+
Sbjct: 127 TQCDFDFIGSESIGSDAEIIQVIYASLKALGIERFTISMNNRKILNGICDYFGV-KEQTS 185
Query: 598 TICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFV---KERGSPLVLLSKLRQEGS 654
+ IDKLDK E + KE+VEE GLS E+A I F +ER S EG
Sbjct: 186 DVLRIIDKLDKIGEESVIKELVEELGLSQESARGILGFTSLKQERSSEEFFAKVASYEGL 245
Query: 655 LFLENSSAKLALDDLEILFQALEKSKCIDKVVF--DLSLARGLDYYTGV----------- 701
+ S + + ++ L+ L+ + +D+ + + S+ARGL YYTG+
Sbjct: 246 ----SDSLREGMGEMRALYAILDTLE-MDRACYKINFSIARGLGYYTGIVYETTLDALPS 300
Query: 702 -GSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGL 760
GS+ +GGRYDNL F +++ VG S+G++R+ + +++ R T QVLV
Sbjct: 301 IGSVCSGGRYDNLTQSFSKERMSGVGASIGVDRL---LAALEELGLLEGRGTSAQVLVAC 357
Query: 761 LGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIV 818
+ + +L + ++ L +K+E Y K + + A P++ ++GE EL +G+V
Sbjct: 358 MEESQLAYSYKVAERLRTLGIKSEVYPEAVKPKRSLAYANSKGHPYVAVIGEDELKQGVV 417
Query: 819 KLKNI 823
LK++
Sbjct: 418 TLKDM 422
>sp|P56455|SYH_HELPY Histidine--tRNA ligase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=hisS PE=3 SV=1
Length = 442
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 218/425 (51%), Gaps = 39/425 (9%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGED-SKLI 489
PK+ G +D + + + + ++ VF+ G + ++TP E +TL+ D K I
Sbjct: 4 PKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAQTLLPDASSDIQKEI 63
Query: 490 YDLADQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQ 546
Y D G +LR+DLTVP AR+V+++ T FKR+ I V+R + KGRYREF Q
Sbjct: 64 YRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYREFTQ 123
Query: 547 CDFD-------IADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVP--SEKFR 597
CDFD + D E+++++ L LD+ D+ + +NHR +L+G+ E G+ +E R
Sbjct: 124 CDFDFIGSESLVCDAEIIQVIVASLKALDLEDFCVSINHRKILNGICEYFGISQVNEALR 183
Query: 598 TICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFL 657
+DKL+K +++E+ +E GL+ T + ++ + + L + L
Sbjct: 184 I----VDKLEKIGLNGVEEELKKECGLNSNTIKELLELIQIKQNDLSHAEFFEKIAYLKD 239
Query: 658 ENSSAKLALDDLEILFQA---LEKSKCIDKVVFDLSLARGLDYYTGV------------G 702
N + K + DLE L+Q L+ S+ + K+ D S+ARGL YYTG+ G
Sbjct: 240 YNENLKKGIQDLERLYQLLGDLQISQNLYKI--DFSIARGLGYYTGIVYETTLNEMKSLG 297
Query: 703 SIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG 762
S+ +GGRYD+L F + + VG S+GI+R+ + ++Q R+T+ +VL+ +
Sbjct: 298 SVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVALSEMQLLDE---RSTQAKVLIACMH 354
Query: 763 DK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKL 820
++ A L L + + +E Y +K+ K A ++ ++GE E + L
Sbjct: 355 EEYFSYANRLAESLRQSGIFSEVYPEAQKIKKPFSYANHKGHEFVAVIGEEEFKSETLSL 414
Query: 821 KNIDT 825
KN+ +
Sbjct: 415 KNMHS 419
>sp|B2UUV2|SYH_HELPS Histidine--tRNA ligase OS=Helicobacter pylori (strain Shi470)
GN=hisS PE=3 SV=1
Length = 442
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 216/425 (50%), Gaps = 39/425 (9%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGED-SKLI 489
PK+ G +D + + + S ++ VF+ G + ++TP E E L+ D K I
Sbjct: 4 PKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAEVLLPDASSDIQKEI 63
Query: 490 YDLADQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQ 546
Y D G +LR+DLTVP AR+V+++ T FKR+ I V+R + KGRYREF Q
Sbjct: 64 YRFKDHGDRDVALRFDLTVPLARFVSLHHQTLGMPFKRYAIGNVFRGERAQKGRYREFTQ 123
Query: 547 CDFD-------IADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVP--SEKFR 597
CDFD + D E+++++ L LD+ D+ I +NHR +L+G+ E GV +E R
Sbjct: 124 CDFDFIGSESLVCDAEIIQVIVASLKALDLEDFCISINHRKILNGICEYFGVSQVNEALR 183
Query: 598 TICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFL 657
+DKL+K +++E+ +E L + T + V+ + + L + L
Sbjct: 184 I----VDKLEKIGLNGVEEELKKECDLDLNTIKELLEMVQIKQNDLSHAEFFEKIAYLKD 239
Query: 658 ENSSAKLALDDLEILFQA---LEKSKCIDKVVFDLSLARGLDYYTGV------------G 702
N + K + DLE L+Q L+ S+ + K+ D S+ARGL YYTG+ G
Sbjct: 240 YNENLKKGIQDLERLYQLLGDLQISQNLYKI--DFSIARGLGYYTGIVYETTLNGMKSLG 297
Query: 703 SIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG 762
S+ +GGRYD+L F + + VG S+GI+R+ + ++Q R+T+ +VL+ +
Sbjct: 298 SVCSGGRYDHLTQNFSKENLQGVGASIGIDRLIVALSEMQLLDE---RSTQAKVLIACMH 354
Query: 763 DK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKL 820
++ A L L + + +E Y +K+ K A ++ ++GE E + L
Sbjct: 355 EEYFSYANRLAESLRQSGIFSEVYPEAQKIKKPFSYANHKGHEFVAVIGEEEFKSETLSL 414
Query: 821 KNIDT 825
KN+ +
Sbjct: 415 KNMHS 419
>sp|Q7VF68|SYH_HELHP Histidine--tRNA ligase OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=hisS PE=3 SV=1
Length = 442
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 228/430 (53%), Gaps = 47/430 (10%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGED--SKL 488
P+ G +D ++ + + ++ VF G + ++TP E + L+ K G D K
Sbjct: 6 PRTLSGFKDRLPKEALAKAHLLNKVSNVFMNFGFVPIETPHLEYADVLI-KQGSDEIQKE 64
Query: 489 IYDLADQGGELCSLRYDLTVPFARYVAMN----GLTSFKRHQIAKVYRRDNPSKGRYREF 544
+Y D GG +LR+DLTVP AR+V+ GL FKR+ I V+R + +GRYREF
Sbjct: 65 LYRFKDHGGRDVALRFDLTVPLARFVSQYKNEVGL-PFKRYAIGNVFRGERAQRGRYREF 123
Query: 545 YQCDFDI-------ADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEK-F 596
QCDFD D E+++++ L +L I ++ I LNHR +L+G+ E CG+ EK
Sbjct: 124 TQCDFDFIGSDSISCDAEILQVIYASLMKLGIEEFTIWLNHRSILNGICEYCGITQEKDI 183
Query: 597 RTICSSIDKLDKQSFEQIKKEMVEEKGLSVETADRI--GTFVKERGSPLVLLSKLRQEGS 654
IDKLDK E++ +E+ +E GL+ + + T +K++G ++
Sbjct: 184 NVALRIIDKLDKIGKERVSEELQKELGLNNNQVENLLEYTSIKQQGESESFFRQIS---- 239
Query: 655 LFLE--NSSAKLALDDLEILFQALEKSKCIDKVVF--DLSLARGLDYYTGV--------- 701
F+E N S K ++DL++L++ L S +D+ + + S+ARGL YYTG+
Sbjct: 240 -FMEEWNDSIKKGIEDLKMLYEVL-SSLQMDRDTYRVNFSIARGLGYYTGIVYETTLNAL 297
Query: 702 ---GSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV 758
GS+ +GGRYDNL F +++ VG S+GI+R+ +E+++ + RAT + L+
Sbjct: 298 KSIGSVCSGGRYDNLTRTFSKEKMSGVGASIGIDRLLAALEELELLQK---RATSARALI 354
Query: 759 GLLGDKLPLA-AELVSELWN-AKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNE 815
+ D+L A L++E + +++ E Y K+ K A ++V++GE E N
Sbjct: 355 VCM-DRLYFGYAHLLAESFRCSEIPIEVYPEASKLKKQFTYAHLKGYEFVVVIGENEFNT 413
Query: 816 GIVKLKNIDT 825
+ LKN+ +
Sbjct: 414 KTLTLKNMTS 423
>sp|Q17VP5|SYH_HELAH Histidine--tRNA ligase OS=Helicobacter acinonychis (strain Sheeba)
GN=hisS PE=3 SV=1
Length = 442
Score = 183 bits (464), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 214/423 (50%), Gaps = 35/423 (8%)
Query: 431 PKLPKGTRDFAKEQMAVREKAFSIITEVFKRHGAMALDTPVFEMRETLMGKYGED-SKLI 489
PK+ G +D + + + S ++ VF+ G + ++TP E ETL+ D K I
Sbjct: 4 PKVLSGFKDRLPKDAIQKAQLLSKVSVVFQSFGFVPIETPHLEYAETLLPDASSDIQKEI 63
Query: 490 YDLADQGGELCSLRYDLTVPFARYVAMNGLT---SFKRHQIAKVYRRDNPSKGRYREFYQ 546
Y D GG +LR+DLTVP AR+V++ T FKR+ I V+R + KGRYREF Q
Sbjct: 64 YRFKDHGGRDVALRFDLTVPLARFVSLYHQTLGMPFKRYAIGNVFRGERAQKGRYREFTQ 123
Query: 547 CDFD-------IADFEVVKILTELLNELDIGDYEIKLNHRLLLDGMLEICGVPSEKFRTI 599
CDFD + D E+++++ L LD+ D+ + +NHR +L+G+ E G+ + +
Sbjct: 124 CDFDFIGSESLVCDAEIIQVVIASLKALDLEDFCVSINHRKILNGICEYFGIS--QVTGV 181
Query: 600 CSSIDKLDKQSFEQIKKEMVEEKGLSVETADRIGTFVKERGSPLVLLSKLRQEGSLFLEN 659
+DKL+K +++E+ +E L+ T + V+ + L + L N
Sbjct: 182 LRIVDKLEKIGLNGVEEELKKECDLNPNTIKGLLEMVQIKQDDLSHAEFFEKIAYLKDCN 241
Query: 660 SSAKLALDDLEILFQA---LEKSKCIDKVVFDLSLARGLDYYTGV------------GSI 704
+ K + DLE L+Q L+ S+ + K+ D S+ARGL YYTG+ GS+
Sbjct: 242 ENLKKGIQDLEKLYQLLGDLQISQNLYKI--DFSIARGLGYYTGIVYETTLNDMKSLGSV 299
Query: 705 AAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK 764
+GGRYD+L F + + VG S+GI+R+ + +Q R+T+ +VL+ + ++
Sbjct: 300 CSGGRYDHLTKNFSKEDLQGVGASIGIDRLIVALSGMQLLDE---RSTQAKVLIACMNEE 356
Query: 765 -LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKN 822
A L L + + +E Y +K+ K A ++ I+GE E + LKN
Sbjct: 357 YFSYANRLAESLRQSGIFSEVYPEAQKIKKPFSYANHKGHEFVAIIGEEEFKSETLSLKN 416
Query: 823 IDT 825
+ +
Sbjct: 417 MHS 419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,562,091
Number of Sequences: 539616
Number of extensions: 12748062
Number of successful extensions: 46893
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 363
Number of HSP's that attempted gapping in prelim test: 43319
Number of HSP's gapped (non-prelim): 1598
length of query: 846
length of database: 191,569,459
effective HSP length: 126
effective length of query: 720
effective length of database: 123,577,843
effective search space: 88976046960
effective search space used: 88976046960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)