BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003120
(846 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2 OS=Arabidopsis thaliana
GN=APC2 PE=1 SV=1
Length = 865
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/842 (66%), Positives = 663/842 (78%), Gaps = 38/842 (4%)
Query: 1 MEESTSMYCNLGILEKLNDESVQEIIESYNGFCATTNSLLNGGRDIAVGKEFVTHVRSLC 60
ME S CNL ILE L+D+++QEI ESY+GF T SL+ G D V EFV+HV LC
Sbjct: 1 MEALGSSDCNLEILETLSDDAIQEITESYDGFFTTVESLIAGTGDSLVEDEFVSHVYCLC 60
Query: 61 KHGLQSLAHGHFLRSLEETFERTFVSKFWRHFDVYSKVAVLEKNKPLIYDDEVHEVLCKA 120
K+GL SL HFLRSLE+ FE+ S FW+HFD YS+ K Y +E+ VLCKA
Sbjct: 61 KYGLDSLVRDHFLRSLEQAFEKGGASSFWQHFDAYSE------KKHHNYGEEIQIVLCKA 114
Query: 121 LEEICMEIQYQEKCLFMLVHAIESPRDCSLEGKPILDSE-VHLFAKYQLMVSSVLMASLP 179
LEEI +E QY EKCL ++VHA++S ++ S + + D+E VHLF+++Q M+SS LM +LP
Sbjct: 115 LEEISIEKQYHEKCLSIVVHALQSFKEQSSDDRQNSDTERVHLFSRFQSMLSSTLMTTLP 174
Query: 180 PHFPEMLYWYFKGRLEELSTIMDGELEDGNDSQDKDDMDLDEKGKQRTGEMDIDQSNNHG 239
HFPE+L+WYFK RLEELS IMDG DG + Q+ D MDLDEK + + GEMD+D+ + G
Sbjct: 175 QHFPEILHWYFKERLEELSAIMDG---DGIEEQEDDCMDLDEKLRYKNGEMDVDEGCSQG 231
Query: 240 KFSEKSKLVKHIGKVVHDLRTLGFTSMTENAYASAIFSLLKAKVHNLAGEDYRSSVLEPI 299
K KLVK+IGKVV DLR++GFTSM ENAYASAIF LLKAKVH+LAG+DYR+SVLE I
Sbjct: 232 KRLGHDKLVKNIGKVVRDLRSIGFTSMAENAYASAIFLLLKAKVHDLAGDDYRTSVLESI 291
Query: 300 KAWIQFVSQAVPLQFLNALLAYLGESESYDSPTAGLKSPLASRPLCCPGTH-----NPSE 354
K WIQ VPLQFLNALL+YLG+S SY + ++GL SPLA CCP PSE
Sbjct: 292 KEWIQ----TVPLQFLNALLSYLGDSVSYGTTSSGLTSPLA----CCPSPSFSRVVTPSE 343
Query: 355 GLVRWRLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFI 414
G+VRW+LRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFI
Sbjct: 344 GIVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFI 403
Query: 415 SALKYRLLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIV 474
S+LKYRLLTAGASTNDILHQYVSTIKALR IDP GVFLEAVGEPIRDYLRGRKDTIKCIV
Sbjct: 404 SSLKYRLLTAGASTNDILHQYVSTIKALRAIDPAGVFLEAVGEPIRDYLRGRKDTIKCIV 463
Query: 475 TMLTDGTGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPV 534
TMLTDG+GGN NGSGN GDSLLEEL RDEE+QEN+G DD F+ DDKQAWINA WEPDPV
Sbjct: 464 TMLTDGSGGNANGSGNPGDSLLEELMRDEESQENVGFDDDFHTDDKQAWINASRWEPDPV 523
Query: 535 EADPLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELL 594
EADPLKGS ++RKVDILGM+V IIGSK+QLVNEYRVMLA+KLLNK+DY+ID+EIRT+ELL
Sbjct: 524 EADPLKGSLSQRKVDILGMLVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELL 583
Query: 595 KIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISS 654
KIHFGE+SMQRCEIMLNDLIDSKR N NIK K S G+EL E +S+ L +TI+S+
Sbjct: 584 KIHFGEASMQRCEIMLNDLIDSKRVNTNIK----KASQTGAELRENELSVDTLTSTILST 639
Query: 655 NFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFT 714
NFWPP+QDE L +PG +D+LL+DYA R++EIKTPRKLLWKKNLGTVKLELQF+DRAMQFT
Sbjct: 640 NFWPPIQDEPLELPGPVDKLLSDYANRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFT 699
Query: 715 VAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGSNDHLY 774
V+P HAAIIMQFQ++ SWT K+LA +G+P+D L+RR+NFWISKG+++ES G SN +
Sbjct: 700 VSPTHAAIIMQFQEKKSWTYKDLAEVIGIPIDALNRRVNFWISKGVLRESTGANSNSSVL 759
Query: 775 NLVEGMVDSSKNGDNTGSCEELLGGDEDGERSVASVEDQIRNEMTVYEPTLFLVRYVANI 834
LVE + DS KN E GE S+ASVEDQ+R EMT+YE +++ +
Sbjct: 760 TLVESITDSGKNEGEELLTGEEE-----GETSIASVEDQLRKEMTIYE------KFIMGM 808
Query: 835 LT 836
LT
Sbjct: 809 LT 810
>sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1
SV=1
Length = 822
Score = 342 bits (876), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 212/594 (35%), Positives = 319/594 (53%), Gaps = 67/594 (11%)
Query: 250 HIGKVVHDLRTLGFTSMTENAYASAIFSLLKAKVHNLAGEDYRSSVLEPIKAWIQFVSQA 309
+ +V+H L L ++ A + + + + ++ + +Y S L WI+ V
Sbjct: 242 QLSQVLHRLSLL--ERVSAEAVTTTLHQVTRERMEDRCRGEYERSFLREFHKWIERV--- 296
Query: 310 VPLQFLNALLAYLGESESYDSPTAGLKSPLASRPLCCPGTHNPSEGLVRWRLRLEYFAYE 369
+ +LG+ D P P + L RWR ++ F Y
Sbjct: 297 ---------VGWLGKVFLQDGPAR-------------PASPEAGNTLRRWRCHVQRFFYR 334
Query: 370 TLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALKYRLLTAGASTN 429
LRI +LF I+ D+P+S PAIEDLK CLE T Q +L+ S +AL+ RLL G +T
Sbjct: 335 IYASLRIEELFSIVRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKAALETRLLHPGVNTC 394
Query: 430 DILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTGGNPNGSG 489
DI+ Y+S IKALR +DP+ V LE EPIR YLR R+DT++ IV LT G+ +G+G
Sbjct: 395 DIITLYISAIKALRVLDPSMVILEVACEPIRRYLRTREDTVRQIVAGLT----GDSDGTG 450
Query: 490 NAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADPLKGSRNRRKVD 549
+ L EL++ + G D + + + W+ PDPV+ADP K S RR D
Sbjct: 451 D----LAVELSKTDPASLETGQDSEDDSGEPEDWV------PDPVDADPGKSSSKRRSSD 500
Query: 550 ILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIM 609
I+ ++V I GSKD +NEYR +LAD+LL++ + + EIR +ELLK+ FGE+ M CE+M
Sbjct: 501 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 560
Query: 610 LNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPG 669
L D+ DS+R NANI+ EK+ EE G+ A I+SS FWPP +DE L VP
Sbjct: 561 LKDMADSRRINANIREEDEKRP------AEEQPPFGVY-AVILSSEFWPPFKDEKLEVPE 613
Query: 670 HIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQ 729
I L Y K++ ++K R L WK LG V ++++ DR + V P+ A I++ FQDQ
Sbjct: 614 DIRAALEAYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQDQ 673
Query: 730 TSWTSKNLAAAVGVPVDVLSRRINFWISKGIIK-ESVGTGSNDHLYNLVEGMVDSSKNGD 788
SWT + L+ AV +PV +L RR++ W+ +G+++ E GT ++++E + ++ D
Sbjct: 674 ASWTLEELSKAVKMPVALLRRRMSVWLQQGVLREEPPGT------FSVIEE--ERPQDRD 725
Query: 789 NTGSCEELLGGDEDGERSVASVEDQIRNEMTVYEPTLFLVRYVANILTQKSLLS 842
N L+ D++ + +AS DQ E+ L Y+ +LT LS
Sbjct: 726 NMV----LIDSDDESDSGMASQADQKEEEL------LLFWTYIQAMLTNLESLS 769
>sp|Q8BZQ7|ANC2_MOUSE Anaphase-promoting complex subunit 2 OS=Mus musculus GN=Anapc2 PE=1
SV=2
Length = 837
Score = 341 bits (874), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 250/798 (31%), Positives = 389/798 (48%), Gaps = 86/798 (10%)
Query: 50 KEFVTHVRSLCKHGLQSLAHGHFLRSLEETFERTFVSKFWRHFDVYSKVAVLEKNKPLIY 109
+E V L HGL S+ F+ L+ + ++FW N +
Sbjct: 68 EELRAAVEVLRGHGLHSVLEEWFVEVLQNDLQGNIATEFW--------------NAIALR 113
Query: 110 DDEVHEVLCKALEEICMEIQYQEKCLFMLVHAIESPRDCSLEGKPILDSEVHLFAKYQLM 169
++ V E C L + E L +H++E + G + L K M
Sbjct: 114 ENSVDEPQCLGL--LLDAFGLLESRLDPYLHSLELLEKWTRLGLLMGAGAQGLREKVHTM 171
Query: 170 VSSVLMASLPPHFPEMLYWYFKGRLEELSTIMDGELEDGNDSQDKDDMDLDEKGKQRTGE 229
+ VL S P F EM+ + GR + + E G D + + ++D ++
Sbjct: 172 LRGVLFFSTPRTFQEMVQRLY-GRFLRVYMQSKRKGEGGTDPELEGELDSRYARRRYYRL 230
Query: 230 MDIDQSNNHGKFSEKSKLVKHIGKVVHDLRTLGFTSMTENAYASAIFSLL----KAKVHN 285
+ G ++ + + + + L S+ E A A+ + L + ++ +
Sbjct: 231 LQSPLCAGCGSDKQQCWCRQALEQFNQLSQVLHRLSLLERVCAEAVTTTLHQVTRERMED 290
Query: 286 LAGEDYRSSVLEPIKAWIQFVSQAVPLQFLNALLAYLGESESYDSPTAGLKSPLASRPLC 345
+Y S L WI+ V + +LG+ D+PT
Sbjct: 291 RCRGEYERSFLREFHKWIERV------------VGWLGKVFLQDNPTR------------ 326
Query: 346 CPGTHNPSEGLVRWRLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQ 405
P + L RWR ++ F Y LRI +LF II D+P+S PAIEDLK CLE T Q
Sbjct: 327 -PTSPEAGNTLRRWRCHVQRFFYRIYATLRIEELFSIIRDFPDSRPAIEDLKYCLERTDQ 385
Query: 406 HSKLVESFISALKYRLLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRG 465
+L+ S AL+ RLL G +T DI+ Y+S IKALR +DP+ V LE EPIR YLR
Sbjct: 386 RQQLLVSLKVALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVACEPIRRYLRT 445
Query: 466 RKDTIKCIVTMLTDGTGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWIN 525
R+DT++ IV LT G+ +G+G+ L EL++ + G D + + + W+
Sbjct: 446 REDTVRQIVAGLT----GDSDGTGD----LAVELSKTDPACLETGQDSEDDSGEPEDWV- 496
Query: 526 AVCWEPDPVEADPLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEID 585
PDPV+ADP+K S RR DI+ ++V I GSKD +NEYR +LAD+LL++ + +
Sbjct: 497 -----PDPVDADPVKSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPE 551
Query: 586 SEIRTLELLKIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLG 645
EIR +ELLK+ FGE+ M CE+ML D+ DS+R NANI+ EK+ + EE G
Sbjct: 552 REIRNVELLKLRFGEAPMHFCEVMLKDMADSRRINANIREEDEKRPV------EEQPPFG 605
Query: 646 LLDATIISSNFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQ 705
+ A I+SS FWPP +DE L VP I L Y K++ ++K R L WK LG V ++++
Sbjct: 606 VY-AVILSSEFWPPFKDEKLEVPEDIRAALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVE 664
Query: 706 FDDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIK-ES 764
DR + V P+ A +++ FQ+Q SWT + L+ V +PV +L RR++ W+ +G+++ E
Sbjct: 665 LADRTLSVAVTPVQAVVLLYFQNQASWTLEELSKVVKMPVALLRRRMSVWLQQGVLREEP 724
Query: 765 VGTGSNDHLYNLVEGMVDSSKNGDNTGSCEELLGGDEDGERSVASVEDQIRNEMTVYEPT 824
GT ++++E + ++ DN L+ D++ + +AS DQ E+
Sbjct: 725 PGT------FSVIEE--ERPQDRDNMV----LIDSDDESDSGMASQADQKEEEL------ 766
Query: 825 LFLVRYVANILTQKSLLS 842
L Y+ +LT LS
Sbjct: 767 LLFWAYIQAMLTNLESLS 784
>sp|Q551S9|APC2_DICDI Anaphase-promoting complex subunit 2 OS=Dictyostelium discoideum
GN=anapc2 PE=3 SV=1
Length = 907
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 246/438 (56%), Gaps = 44/438 (10%)
Query: 358 RWRLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISAL 417
+W+ RLE+ YE RI++LF++IV YP+S P++EDL C + ++ + L
Sbjct: 357 QWKKRLEFSIYENYSQQRISELFDMIVQYPDSLPSLEDLSICFQKIPIEKTMITNLKRVL 416
Query: 418 KYRLLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTML 477
RLL GA+T+DI+ QY+STI A+ IDP+G+ +E VG+PIR+YL R+DTI+CI++
Sbjct: 417 HNRLLHPGANTSDIITQYISTIHAMDIIDPSGMVMEKVGKPIREYLSQREDTIRCIISSF 476
Query: 478 TDGTGG------NPNGSGNAGD-----SLLEELNRDEENQENIGVDDGFN---IDDKQAW 523
T+ + N + N GD SLL N D + VD+G N IDD + W
Sbjct: 477 TEESNEIYQELCNYDPQDNGGDDDSNNSLLAFGNCD------LYVDEGDNFSSIDDFKFW 530
Query: 524 INAVCWEPDPVEADPLKGS----------RNRRKVDILGMIVGIIGSKDQLVNEYRVMLA 573
I P+ ++ S + ++K D + +V I D +NEYR ML+
Sbjct: 531 I------PNKIDGSSTTISIGNAKANNNNKKKKKKDTISHLVNIYDGIDLFINEYRSMLS 584
Query: 574 DKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLA 633
D+LL+ D+++D EI+ +ELLK+ FG+S + CEIM+ D++DSKR N IK + + +
Sbjct: 585 DRLLSVVDFDLDKEIKNIELLKLRFGDSVLFNCEIMIKDMVDSKRLNLQIKNS-QGVNNN 643
Query: 634 GSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLW 693
+ L + I+S FWP ++ + P I++ + Y+K + IKTPR+L+W
Sbjct: 644 NNNNNNNNNELKEFETLILSQLFWPTLKGDEFKYPKSIEKKMQIYSKEYERIKTPRQLIW 703
Query: 694 KKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD-------QTSWTSKNLAAAVGVPVD 746
K++LG V L+L+ + F V+PIHA +IM F+ + T + L+ + + D
Sbjct: 704 KQHLGLVDLDLEIGNNIQSFQVSPIHATLIMLFESDDGDDDDEKELTLEYLSKQLEISKD 763
Query: 747 VLSRRINFWISKGIIKES 764
++ +++ FW++ IIKE+
Sbjct: 764 LVKKKLIFWLNNQIIKET 781
>sp|Q874R3|APC2_SCHPO Anaphase-promoting complex subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=apc2 PE=1 SV=1
Length = 681
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 211/405 (52%), Gaps = 40/405 (9%)
Query: 361 LRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALKYR 420
++L++ + L LR + +I++ YP S AIEDL+ Q L E+F+
Sbjct: 208 VQLDHLVSQILAHLRSDNILDIVLHYPNSLGAIEDLRLVARQKQQRQYLTETFVKDCTSS 267
Query: 421 LLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTML-TD 479
+LTA + ++ IL YVSTI+ +DP GV L+ +PIR +L R+D KC+V++L D
Sbjct: 268 ILTASSDSSYILLFYVSTIRCFVALDPPGVLLDKAAKPIRSFLNEREDAYKCLVSLLFVD 327
Query: 480 GTGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADP- 538
G G L EL++ NID + W PDP++A P
Sbjct: 328 GEKG-----------LRSELSQIPTE----------NIDSTTDRFDNYHWMPDPIDAAPD 366
Query: 539 LKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHF 598
K +R D++G ++ I SK+ LV E +++LAD+LL +DY + E + +E LK F
Sbjct: 367 FKKPTDR---DVVGSLISIFKSKEPLVKELQLLLADRLLQLTDYHYEVEAKNIEFLKYRF 423
Query: 599 GESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP 658
GE+ +Q C +MLND+ +S+ + +I E VS G L TI+S FWP
Sbjct: 424 GETVLQMCSVMLNDIENSRFIDQSIHM-------------ENYVSKG-LHVTILSRLFWP 469
Query: 659 PMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPI 718
+ +PG + + L YA+ + E K R+L++ NLG+V+LE++ +DR + TV P
Sbjct: 470 TLSVRYFHLPGPLKKELDAYAEEYRERKRKRELVFLPNLGSVELEIELEDRTLTLTVTPE 529
Query: 719 HAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKE 763
AA I F++ ++ + A + P +++ R + FW+ ++ +
Sbjct: 530 QAAFISLFEETSTLHIEKAAELLDQPKEIVERHLKFWLHHRVLTD 574
>sp|P34514|APC2_CAEEL Anaphase-promoting complex subunit 2 OS=Caenorhabditis elegans
GN=apc-2 PE=1 SV=3
Length = 731
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 199/386 (51%), Gaps = 17/386 (4%)
Query: 382 IIVDYPESSPAIEDLKQCLEYTGQHSKL--VESFISALKYRLLTAGASTNDILHQYVSTI 439
I VD+P ++ +K CL T H ++ I + +LL A T DIL Y + +
Sbjct: 234 IAVDFPVKFRSLITMKYCLLRTNNHGRVDFTNYLIDQVNTKLLVASVDTKDILKAYAACV 293
Query: 440 KALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTGGNPNGSGNAGDSLLEEL 499
++LR +D + V + V IR+YL+ R DT++ I++ +T + +
Sbjct: 294 ESLREMDNSCVVMHKVCGVIREYLKRRPDTVQQIISYITSNKKNELEKDMSLQSKTVRSA 353
Query: 500 NRDEENQENIGVDDGFNIDDKQA--WINAVCWEPDPVEADPLKGSRNRRKVDILGMIVGI 557
DEE E GV+D F ++ + W N W P+P +A G+ + VD+ M+V +
Sbjct: 354 MMDEE--ELKGVNDDFLPENMETLGWEN---WMPNPTDATVGDGAPGHQGVDVFNMLVSV 408
Query: 558 IGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSK 617
GSK+ V EYR +LA++L + + + + E R L+LLK+ F S +Q CE+ML D+I S
Sbjct: 409 YGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDVIHSL 468
Query: 618 RTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEAL--IVPGHIDQLL 675
+ + E+ + G V + + A IISS++WP ++ E ++P + +
Sbjct: 469 DIDKKFEDMSERSA------GNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAM 522
Query: 676 ADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSWTSK 735
Y + + ++K RKL W +++G V++ + D + T+ ++A ++ F ++ +WT+
Sbjct: 523 DVYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTA 582
Query: 736 NLAAAVGVPVDVLSRRINFWISKGII 761
+ +G+ V V +R+ + + +G I
Sbjct: 583 EVVEKMGMSVVVTRKRLEWLVKQGFI 608
>sp|Q12440|APC2_YEAST Anaphase-promoting complex subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APC2 PE=1 SV=1
Length = 853
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 206/459 (44%), Gaps = 66/459 (14%)
Query: 374 LRIAKLFEI-IVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALKYRLLTAGASTNDIL 432
+R ++F+I ++ YP+S + +L++ ++ ++ +V +F+S K +L +T D L
Sbjct: 282 IRTNEIFDICVLAYPDSKVTLLELRKIMKDFKDYTNIVTTFLSDFKKYILNPSVTTVDAL 341
Query: 433 HQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTD------GTGGNPN 486
+YV TIKA +DPTG L ++ ++ Y + RK + ++ + D N N
Sbjct: 342 LRYVKTIKAFLVLDPTGRCLHSITTFVKPYFQERKHLVNVLLYAMLDLPEEELKEKINFN 401
Query: 487 GSGNAGDSLLEELNRDEENQE-NIGVDDGFNIDDKQAW---------INA---------- 526
A SL++ L+ + NQ+ NI D N W +N
Sbjct: 402 VDMKALLSLVDTLHDSDINQDTNITKRDK-NKKSPFLWNLKVKGKRELNKDLPIRHAMLY 460
Query: 527 -------VCWEPDPVEADPLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNK 579
+ W P+P + P + K ++ +++ + S++ ++E+R +L D+L
Sbjct: 461 EHILNYYIAWVPEPNDMIPGNIKSSYIKTNLFEVLLDLFESREFFISEFRNLLTDRLFTL 520
Query: 580 SDYEIDSE-IRTLELLK---IHFGESSMQRCEIMLNDLI----------DSKRTNANIKA 625
Y +D + R L+L++ + F E+S + N ++ D+ ++N N
Sbjct: 521 KFYTLDEKWTRCLKLIREKIVKFTETS--HSNYITNGILGLLETTAPAADADQSNLNSID 578
Query: 626 TIEKQSLAGSELGEEGVSLGLLDATI----ISSNFWP------PMQDEALIVPGHIDQLL 675
+ EL + + LD I IS +W D A +P +++ L
Sbjct: 579 VMLWDIKCSEELCRKMHEVAGLDPIIFPKFISLLYWKYNCDTQGSNDLAFHLPIDLEREL 638
Query: 676 ADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDD-RAMQFTVAPIHAAIIMQF----QDQT 730
Y+ ++++K RKL K+ G V+++L F D R + V+ ++I QF +
Sbjct: 639 QKYSDIYSQLKPGRKLQLCKDKGKVEIQLAFKDGRKLVLDVSLEQCSVINQFDSPNDEPI 698
Query: 731 SWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGS 769
+ + L+ ++ + L+ ++FWI KG++ + GT S
Sbjct: 699 CLSLEQLSESLNIAPPRLTHLLDFWIQKGVLLKENGTYS 737
>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul3 PE=1 SV=2
Length = 785
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 557 IIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDS 616
I KD Y+ LA +LLN D+E+ + LK G Q+ E M ND+
Sbjct: 458 FISEKDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDM--- 514
Query: 617 KRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP----PMQDEA---LIVPG 669
N+ + ++ S L +L L + +I++S FWP P + + ++
Sbjct: 515 -----NLSQELLQEYKHNSALQSAKPALDL-NVSILASTFWPIDLSPHKIKCNFPKVLLA 568
Query: 670 HIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 728
IDQ Y + T RKLLW ++G+ + + F DR V+ I + I++ FQD
Sbjct: 569 QIDQFTDFYLSK----HTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQD 623
>sp|Q54NZ5|CUL3_DICDI Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1
Length = 769
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D + M+ +I KD Y+ LA +LL D+E + LK G + E
Sbjct: 407 LDKILMLFRLIQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLE 466
Query: 608 IMLNDLIDSKRTNANIKATIE--KQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEAL 665
M D+ S+ T + K I+ K++L L+ ++++ FWP
Sbjct: 467 GMFTDMRLSQDTMSGFKTYIQNLKKALPID-----------LNVHVLTTGFWPTQNTANC 515
Query: 666 IVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQ 725
+P I + + R LLW+ N+GT +++ F ++ + V+ I++
Sbjct: 516 NLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLL 575
Query: 726 FQDQTSWTSKNLAAAVGVPVDVLSRRI 752
F DQ+ T K +A G+P L R +
Sbjct: 576 FNDQSKLTFKEIADQTGIPTIDLKRNL 602
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 554 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 613
++ I KD YR LA +LL D E L LK G + E M+ DL
Sbjct: 419 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 478
Query: 614 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHIDQ 673
++ + + L + G+ L + T++++ FWP + + +P + +
Sbjct: 479 TLARENQNSFE-----DYLGSNPAANPGIDLTV---TVLTTGFWPSYKSFDINLPSEMIK 530
Query: 674 LLADYAKRFNEIKTP-RKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQ--DQT 730
+ + K F E KT RKL W +LGT + +FD +A++ V+ AA+++ F D+
Sbjct: 531 CVEVF-KGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKL 589
Query: 731 SWT 733
S+T
Sbjct: 590 SYT 592
>sp|Q3TCH7|CUL4A_MOUSE Cullin-4A OS=Mus musculus GN=Cul4a PE=1 SV=1
Length = 759
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 13/210 (6%)
Query: 546 RKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQR 605
R +D + ++ I KD Y+ LA +LL +D+E L LK G + +
Sbjct: 431 RILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK 490
Query: 606 CEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDE 663
E M D+ SK + K ++ QS G +D T I++ +WP
Sbjct: 491 LEGMFKDMELSKDIMVHFKQHMQNQSAPGP-----------IDLTVNILTMGYWPTYTPM 539
Query: 664 ALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAII 723
+ +P + +L + + + RKL W+ LG L+ F + +F V+ ++
Sbjct: 540 EVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVL 599
Query: 724 MQFQDQTSWTSKNLAAAVGVPVDVLSRRIN 753
+ F + ++ + + A G+ L R +
Sbjct: 600 LMFNEGDGFSFEEIKMATGIEDSELRRTLQ 629
>sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3
Length = 759
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 21/214 (9%)
Query: 546 RKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQR 605
R +D + ++ I KD Y+ LA +LL +D+E L LK G + +
Sbjct: 431 RTLDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK 490
Query: 606 CEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWP---PM 660
E M D+ SK + K ++ QS +G +D T I++ +WP PM
Sbjct: 491 LEGMFKDMELSKDIMVHFKQHMQNQSDSGP-----------IDLTVNILTMGYWPTYTPM 539
Query: 661 QDEALIVPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIH 719
E + P I L + K F K + RKL W+ LG L+ +F + +F V+
Sbjct: 540 --EVHLTPEMIK--LQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQ 595
Query: 720 AAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRIN 753
+++ F + ++ + + A G+ L R +
Sbjct: 596 TLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQ 629
>sp|Q17389|CUL1_CAEEL Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1
Length = 780
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 531 PDPVEADPLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRT 590
PD E + L+ + ++ I KD Y M + +L+++ ++E
Sbjct: 441 PDEAELEELQTK--------IMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANF 492
Query: 591 LELLKIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT 650
+ LK G R M+ND SK A+ K EK++ LG++ V +L
Sbjct: 493 ITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFK---EKKA---DMLGQKSVEFNVL--- 543
Query: 651 IISSNFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRA 710
++SS WP + +P + + + + + +NE R+L W + ++ +
Sbjct: 544 VLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKK 603
Query: 711 MQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGV 743
FT ++ F +Q S+T + +AAA +
Sbjct: 604 YVFTATTAQMCTMLLFNEQDSYTVEQIAAATKM 636
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 19/231 (8%)
Query: 540 KGSRNRRKVDI---LGMIVGI---IGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLEL 593
KG++ ++++ LG I+ + + KD Y ML+ +L+N + D E +
Sbjct: 395 KGNKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITG 454
Query: 594 LKIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATI-- 651
LK G + + M ND+ S TN K + K SL S+G +D +I
Sbjct: 455 LKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLIKNSL----------SIGKIDFSILV 504
Query: 652 ISSNFWP-PMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRA 710
++S W Q + IVP + ++ + + ++ RKL W +L + + F ++
Sbjct: 505 LTSGSWSLHSQTSSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKS 564
Query: 711 MQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGII 761
F V I++ F Q S + + + + + LSR + I I+
Sbjct: 565 YDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLIEAKIL 615
>sp|Q5R4G6|CUL1_PONAB Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1
Length = 776
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 553 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 612
++ I KD Y MLA +L++++ D+E + LK G + + M D
Sbjct: 451 VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD 510
Query: 613 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 672
+ SK N K + L SE + S+ ++SS WP Q +P ++
Sbjct: 511 IGVSKDLNEQFK-----KHLTNSEPLDLDFSI-----QVLSSGSWPFQQSCTFALPSELE 560
Query: 673 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSW 732
+ + + + RKL W L +L + AI++Q+ + ++
Sbjct: 561 RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAY 620
Query: 733 TSKNLAAAVGVPVDVLSRRINFWISKGII 761
T + L + + +D+L++ + + ++
Sbjct: 621 TVQQLTDSTQIKMDILAQVLQILLKSKLL 649
>sp|Q13616|CUL1_HUMAN Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2
Length = 776
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 553 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 612
++ I KD Y MLA +L++++ D+E + LK G + + M D
Sbjct: 451 VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD 510
Query: 613 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 672
+ SK N K + L SE + S+ ++SS WP Q +P ++
Sbjct: 511 IGVSKDLNEQFK-----KHLTNSEPLDLDFSI-----QVLSSGSWPFQQSCTFALPSELE 560
Query: 673 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSW 732
+ + + + RKL W L +L + AI++Q+ + ++
Sbjct: 561 RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAY 620
Query: 733 TSKNLAAAVGVPVDVLSRRINFWISKGII 761
T + L + + +D+L++ + + ++
Sbjct: 621 TVQQLTDSTQIKMDILAQVLQILLKSKLL 649
>sp|Q9WTX6|CUL1_MOUSE Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1
Length = 776
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 553 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 612
++ I KD Y MLA +L++++ D+E + LK G + + M D
Sbjct: 451 VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD 510
Query: 613 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 672
+ SK N K + L SE + S+ ++SS WP Q +P ++
Sbjct: 511 IGVSKDLNEQFK-----KHLTNSEPLDLDFSI-----QVLSSGSWPFQQSCTFALPSELE 560
Query: 673 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSW 732
+ + + + RKL W L +L + AI++Q+ + ++
Sbjct: 561 RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAY 620
Query: 733 TSKNLAAAVGVPVDVLSRRINFWISKGII 761
T + L + + +D+L++ + + ++
Sbjct: 621 TVQQLTDSTQIKMDILAQVLQILLKSKLL 649
>sp|Q9SRZ0|CUL2_ARATH Cullin-2 OS=Arabidopsis thaliana GN=CUL2 PE=1 SV=1
Length = 742
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 558 IGSKDQLVNEYRVMLADKLL---NKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLI 614
I KD +R A +LL N +DY E L K G + E ML D+
Sbjct: 427 ISDKDLFAEFFRKKQARRLLFDRNGNDYH---ERSLLTKFKELLGAQFTSKMEGMLTDMT 483
Query: 615 DSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQDEALIVPGHIDQ 673
+K N +E S+ ++ LG+ T++++ FWP + L +P +
Sbjct: 484 LAKEHQTNF---VEFLSVNKTK------KLGMDFTVTVLTTGFWPSYKTTDLNLPIEMVN 534
Query: 674 LLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 728
+ + + R+L W +LGT +L +FD + ++ V AA+++ F +
Sbjct: 535 CVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNN 589
>sp|Q8LGH4|CUL4_ARATH Cullin-4 OS=Arabidopsis thaliana GN=CUL4 PE=1 SV=1
Length = 792
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 553 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 612
++ I KD Y+ LA +LL ID+E + LK G + E M D
Sbjct: 470 VLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKD 529
Query: 613 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 672
+ SK N + K + + ++ S G+ + + ++++ +WP + +P ++
Sbjct: 530 IELSKEINESFKQSSQARTKLPS-----GIEMSV---HVLTTGYWPTYPPMDVKLPHELN 581
Query: 673 QLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTS 731
+ D K F K + R+L+W+ +LG L+ F + V+ A ++M F D
Sbjct: 582 -VYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMK 640
Query: 732 WTSKNLAAAVGVPVDVLSRRIN 753
+ +++ + + L R +
Sbjct: 641 LSFEDIKDSTSIEDKELRRTLQ 662
>sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4
Length = 913
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 546 RKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQR 605
+ +D + +I I KD Y+ LA +LL +D+E L LK G + +
Sbjct: 585 KMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK 644
Query: 606 CEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEAL 665
E M D+ SK K ++ Q++ G+ L I++ +WP +
Sbjct: 645 LEGMFKDMELSKDIMIQFKQYMQNQNVPGN---------IELTVNILTMGYWPTYVPMEV 695
Query: 666 IVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQ 725
+P + +L + + + RKL W+ LG L+ +F + + V+ +++
Sbjct: 696 HLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLM 755
Query: 726 FQDQTSWTSKNLAAAVGVPVDVLSRRI 752
F + ++ + + A G+ L R +
Sbjct: 756 FNEGEEFSLEEIKQATGIEDGELRRTL 782
>sp|A2A432|CUL4B_MOUSE Cullin-4B OS=Mus musculus GN=Cul4b PE=1 SV=1
Length = 970
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 9/205 (4%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D + +I I KD Y+ LA +LL +D+E L LK G + + E
Sbjct: 644 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE 703
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIV 667
M D+ SK K ++ Q++ G+ L I++ +WP + +
Sbjct: 704 GMFKDMELSKDIMIQFKQYMQNQNVPGN---------IELTVNILTMGYWPTYVPMEVHL 754
Query: 668 PGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQ 727
P + +L + + + RKL W+ LG L+ +F + + V+ +++ F
Sbjct: 755 PPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMFN 814
Query: 728 DQTSWTSKNLAAAVGVPVDVLSRRI 752
+ ++ + + A G+ L R +
Sbjct: 815 EGEEFSLEEIKHATGIEDGELRRTL 839
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 553 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 612
++ I KD Y MLA +L+N + D+E + LK G + + M D
Sbjct: 450 VVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQD 509
Query: 613 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 672
+ SK N+ KQ LA L E + G+ ++SS WP ++P ++
Sbjct: 510 IGVSKDLNSYF-----KQYLAEKNLTME-IDFGI---EVLSSGSWPFQLSNNFLLPSELE 560
Query: 673 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFD-DRAMQFTV--APIHAAIIMQFQDQ 729
+ + + + + + RKL W + +L + + + + +T+ + ++++QF DQ
Sbjct: 561 RSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQ 620
Query: 730 TSWTSKNL 737
S+T + L
Sbjct: 621 LSFTVQQL 628
>sp|Q9ZVH4|CUL3A_ARATH Cullin-3A OS=Arabidopsis thaliana GN=CUL3A PE=1 SV=1
Length = 732
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 16/206 (7%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D + M+ + KD Y+ LA +LL+ D+E + LK G + E
Sbjct: 403 LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGS--ELGEEGVSLGLLDATIISSNFWPPMQDEAL 665
M D+ S+ T + GS EL E G +L + ++++ WP
Sbjct: 463 GMFTDMKTSEDT---------MRGFYGSHPELSE-GPTLIV---QVLTTGSWPTQPAVPC 509
Query: 666 IVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQF-DDRAMQFTVAPIHAAIIM 724
+P + L + + T R+L W+ N+GT ++ F + + V+ ++M
Sbjct: 510 NLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLM 569
Query: 725 QFQDQTSWTSKNLAAAVGVPVDVLSR 750
F + + K + A +P L R
Sbjct: 570 LFNNSDRLSYKEIEQATEIPAADLKR 595
>sp|Q9C9L0|CUL3B_ARATH Cullin-3B OS=Arabidopsis thaliana GN=CUL3B PE=1 SV=1
Length = 732
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D + M+ + KD Y+ LA +LL+ D+E + LK G + E
Sbjct: 403 LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLG-LLDATIISSNFWPPMQDEALI 666
M D+ S T L G +S G L ++++ WP
Sbjct: 463 GMFTDMKTSHDT------------LLGFYNSHPELSEGPTLVVQVLTTGSWPTQPTIQCN 510
Query: 667 VPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQF-DDRAMQFTVAPIHAAIIMQ 725
+P + L + + T R+L W+ N+GT ++ F + + V+ ++M
Sbjct: 511 LPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLML 570
Query: 726 FQDQTSWTSKNLAAAVGVPVDVLSR 750
F + + K + A +P L R
Sbjct: 571 FNNSDRLSYKEIEQATEIPTPDLKR 595
>sp|O14122|CUL4_SCHPO Cullin-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul4 PE=1 SV=1
Length = 734
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 558 IGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSK 617
I SKD Y++ +A +LL +E+ L++LK G E M D+ SK
Sbjct: 417 IASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVNISK 476
Query: 618 RTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHIDQLLAD 677
++ + S A L + L ++S +WP + + +P + Q L
Sbjct: 477 EFTSSFR-----HSKAAHNLHRD------LYVNVLSQAYWPSYPESHIRLPDDMQQDLDC 525
Query: 678 YAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 728
+ K + + +K+ W +LG ++ +F + +++ A +++QF +
Sbjct: 526 FEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNN 576
>sp|P53202|CUL3_YEAST Cullin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CUL3 PE=1 SV=1
Length = 744
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 554 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 613
++G++ KD Y+ L+ +LL + ++ E ++++K G + EIML D+
Sbjct: 419 LIGLLTEKDIFEKIYKKQLSRRLLQQRSL-VEIEKWMVQMIKKVLGTFFTSKLEIMLRDI 477
Query: 614 -IDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP-----PMQDEALIV 667
+ S+ A +TI E +S +++ WP P+ DE + +
Sbjct: 478 SLSSEMYQAFQHSTIN---------SIEYLSFA---PQVLTRTSWPFQSTNPI-DEGISL 524
Query: 668 PGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQ 727
P + Q+LA + ++ R L W +L +++ QF+ + + + I + F+
Sbjct: 525 PPRMSQILAGFEGYYSLKYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFE 584
Query: 728 DQTSWTSKNLAAAVGVPVD 746
D T + +P+D
Sbjct: 585 DYEELTLGEIYELTHIPID 603
>sp|P0CH31|CLL1_ARATH Putative cullin-like protein 1 OS=Arabidopsis thaliana GN=At1g43140
PE=3 SV=1
Length = 721
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 649 ATIISSNFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDD 708
T++++ FWP + L +P + + + + R+L W +LGT + +F+
Sbjct: 489 VTVLTTGFWPSYKTTDLNLPTEMVNCVEAFKVFYGTKTNSRRLSWIYSLGTCHILGKFEK 548
Query: 709 RAMQFTVAPIHAAIIMQFQD 728
+ M+ V+ AA+++ F +
Sbjct: 549 KTMELVVSTYQAAVLLLFNN 568
>sp|O13790|CUL1_SCHPO Cullin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul1 PE=1 SV=1
Length = 767
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 19/225 (8%)
Query: 553 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 612
+I + KD N Y +LA +L+N + D+E L LK G + + M D
Sbjct: 446 IIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQD 505
Query: 613 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEA-LIVPGHI 671
+ S+ + T L S G S A ++ ++FWP + +P +
Sbjct: 506 ISLSQ------EITEAFWQLPQSRAGNIDFS-----ALVLGTSFWPLSPNNVNFHLPEEL 554
Query: 672 DQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDR---AMQFTVAPIHAAIIMQFQD 728
L + + RKL W +L +++ + + + F V+ +++ +
Sbjct: 555 VPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNH 614
Query: 729 QTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGSNDHL 773
+ S+T + LA G+ D L+ +N ++ ++ G ND L
Sbjct: 615 RDSYTYEELAKITGLSTDFLTGILNIFLKAKVL----LLGDNDKL 655
>sp|Q17392|CUL4_CAEEL Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3
Length = 840
Score = 37.4 bits (85), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 11/187 (5%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
VD ++ + KD Y+ LA +L + +D+E L LK G + + E
Sbjct: 504 VDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLE 563
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIV 667
M D+ S+ +E + +E + A +I+ +WP + +
Sbjct: 564 GMFKDMDASENYGRLFNQYLE-------HMNKEKANFT---ARVITPEYWPTYDTYEINI 613
Query: 668 PGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAII-MQF 726
P + L DY + R + W L + + F + +A ++ +I + F
Sbjct: 614 PKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLF 673
Query: 727 QDQTSWT 733
+WT
Sbjct: 674 NKCETWT 680
>sp|Q9D4H8|CUL2_MOUSE Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2
Length = 745
Score = 37.0 bits (84), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 22/208 (10%)
Query: 554 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 613
+ I KD Y MLA +L++ +DSE + LK G + M D+
Sbjct: 421 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDM 480
Query: 614 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQ--DEALIVPGH 670
S N I Q + LG+ ++ + WP Q +P
Sbjct: 481 SVSADLNNKFNNFIRNQDTV--------IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQE 532
Query: 671 IDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQF---- 726
+++ + + +++ + RKL W L T ++++ + + V A+++ F
Sbjct: 533 LEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSE 592
Query: 727 -------QDQTSWTSKNLAAAVGVPVDV 747
QD T K L + +DV
Sbjct: 593 TVSYKELQDSTQMNEKELTKTIKSLLDV 620
>sp|Q1XDD8|CH60_PORYE 60 kDa chaperonin, chloroplastic OS=Porphyra yezoensis GN=groL PE=3
SV=2
Length = 528
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 40 LNGGRDIAVGKEFVTHVRSLCKHGLQSLAHGHFLRSLEET-----FERTFVSKFWRHFDV 94
L+ G DI VGK + + + G+ SL G ++ E FE+ F+S ++
Sbjct: 149 LSSGNDIEVGKMIANAIEKVGREGVISLEEGKSTNTILEITEGMQFEKGFISPYF--VTD 206
Query: 95 YSKVAVLEKNKPLIYDDEVHEVLCKALEEICMEIQYQEKCLFMLVHAIESPRDCSLEGKP 154
++ VL++N +++ D+ ++ + L + +I + L ++ IE ++
Sbjct: 207 TERMEVLQENPFILFTDKKITLVQQELVPLLEQIAKTSRPLLIIAEDIEKEALATI---- 262
Query: 155 ILDSEVHLFAKYQLMVSSVLMASLPPHFPEMLYWYFKGRLEELSTIMDGELEDGNDSQDK 214
+ K + +++ V A P F + K LE++S + +G++ +
Sbjct: 263 -------VVNKLRGILNVV--AVRAPGFGD----RRKSLLEDMSILTNGQVITEDAGLSL 309
Query: 215 DDMDLDEKGKQR 226
D + LD GK R
Sbjct: 310 DTVQLDMLGKAR 321
>sp|Q5RCF3|CUL2_PONAB Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1
Length = 745
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 22/208 (10%)
Query: 554 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 613
+ I KD Y MLA +L++ +DSE + LK Q C
Sbjct: 421 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLK--------QACGYEFTSK 472
Query: 614 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQ--DEALIVPGH 670
+ T+ ++ A + + + + + LG+ ++ + WP Q +P
Sbjct: 473 LHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQE 532
Query: 671 IDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQF---- 726
+++ + + +++ + RKL W L T ++++ + + V A+++ F
Sbjct: 533 LEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSE 592
Query: 727 -------QDQTSWTSKNLAAAVGVPVDV 747
QD T K L + +DV
Sbjct: 593 TVSYKELQDSTQMNEKELTKTIKSLLDV 620
>sp|Q13617|CUL2_HUMAN Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2
Length = 745
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 22/208 (10%)
Query: 554 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 613
+ I KD Y MLA +L++ +DSE + LK Q C
Sbjct: 421 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLK--------QACGYEFTSK 472
Query: 614 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQ--DEALIVPGH 670
+ T+ ++ A + + + + + LG+ ++ + WP Q +P
Sbjct: 473 LHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQE 532
Query: 671 IDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQF---- 726
+++ + + +++ + RKL W L T ++++ + + V A+++ F
Sbjct: 533 LEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSE 592
Query: 727 -------QDQTSWTSKNLAAAVGVPVDV 747
QD T K L + +DV
Sbjct: 593 TVSYKELQDSTQMNEKELTKTIKSLLDV 620
>sp|Q17390|CUL2_CAEEL Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=3
Length = 850
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 84/220 (38%), Gaps = 19/220 (8%)
Query: 547 KVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRC 606
K+D +I I KD Y MLA++L+ + +D+E + LK G +
Sbjct: 507 KLDSAIVIFRYIEDKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKL 566
Query: 607 EIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP-------- 658
M D+ S+ + N I A + + V I+ + WP
Sbjct: 567 SRMFTDIGLSQELSNNFDKHI-----ADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLST 621
Query: 659 -----PMQDEA-LIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQ 712
QD A +P + ++ ++ K + RKL W N+ + L + D+
Sbjct: 622 NSNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYV 681
Query: 713 FTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRI 752
+ A ++ F+ + + K++ +GV D L + I
Sbjct: 682 AQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTI 721
>sp|P94427|GABT_BACSU Probable 4-aminobutyrate aminotransferase OS=Bacillus subtilis
(strain 168) GN=gabT PE=3 SV=1
Length = 436
Score = 35.0 bits (79), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 18/101 (17%)
Query: 17 LNDESVQE-IIESYNGF-----------CATTNSLLNGGRDIAVGKEFVTHVRSLCK-HG 63
++DES + +I+++N F C + G I K FV HV S CK HG
Sbjct: 187 MSDESYDDMVIQAFNDFFIASVAPETVACVVMEPVQGEGGFIIPSKRFVQHVASFCKEHG 246
Query: 64 LQSLAHGHFLRSLEETFERTFVSKFWRHFDVYSKVAVLEKN 104
+ +A ++ F RT HFDV + + K+
Sbjct: 247 IVFVAD-----EIQTGFARTGTYFAIEHFDVVPDLITVSKS 282
>sp|Q9JLV5|CUL3_MOUSE Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1
Length = 768
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 665
M D+ S T +Q L + GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEF-----RQHLQAT-----GVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 666 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 706
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 707 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 750
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|Q13618|CUL3_HUMAN Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2
Length = 768
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 665
M D+ S T +Q L + GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEF-----RQHLQAT-----GVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 666 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 706
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 707 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 750
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|B5DF89|CUL3_RAT Cullin-3 OS=Rattus norvegicus GN=Cul3 PE=1 SV=2
Length = 768
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 43/232 (18%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 665
M D+ S T + L GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEFR----------QHLQATGVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 666 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 706
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 707 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 750
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|A4IHP4|CUL3_XENTR Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1
Length = 768
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 43/232 (18%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 665
M D+ S T + L GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEFR----------QHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 666 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 706
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 707 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 750
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|Q6DE95|CUL3A_XENLA Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1
Length = 768
Score = 34.3 bits (77), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 43/232 (18%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 665
M D+ S T + L GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEFR----------QHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 666 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 706
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 707 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 750
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVR 629
>sp|A1SY74|GCSP_PSYIN Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii
(strain 37) GN=gcvP PE=3 SV=1
Length = 966
Score = 34.3 bits (77), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 360 RLRLEYFAYE----TLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFIS 415
R R E+F YE +++DL LF ++ YP ++ I+DL +E LV
Sbjct: 189 RTRAEFFGYEIISGSMEDLDNHDLFGALLQYPSTTGNIQDLTAIIEKAHAKKTLVSVASD 248
Query: 416 ALKYRLLTA 424
L LL A
Sbjct: 249 LLALTLLKA 257
>sp|Q5UQT0|YR337_MIMIV Uncharacterized cullin-like protein R337 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R337 PE=3 SV=1
Length = 281
Score = 34.3 bits (77), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 8/166 (4%)
Query: 613 LIDSKRTNANI-KATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIV--PG 669
+I ++ N +I AT+E +G+ +S +L+ II W + + V P
Sbjct: 1 MISNRNNNTSIHNATVENVEGKYKSIGD--ISTEMLNPVIIDKTVWTIFNNLNIDVQYPL 58
Query: 670 HIDQLLADYAKRFNEIKTPR-KLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 728
++ L K +N I + + W +GT D+ + T + A II F D
Sbjct: 59 ELECYLNIVEKSYNIIYENKFSINWLPTMGTACFRAILGDKNVTITCNILQAIIISLFND 118
Query: 729 QTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGSNDHLY 774
+ ++ ++ G+ D+ + + I+ SND +Y
Sbjct: 119 TNNLSASSVYNKTGIQYDLSEKILESLFEANIVTRKY--SSNDTVY 162
>sp|Q6GPF3|CUL3B_XENLA Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1
Length = 768
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 79/228 (34%), Gaps = 35/228 (15%)
Query: 548 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 607
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 608 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 665
M D+ S T + L GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEFR----------QHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 666 I-VPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQF------------------ 706
+P + + + + R+L + ++G+ L F
Sbjct: 522 CNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQ 581
Query: 707 ----DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 750
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 582 VTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|Q9QXW2|FBXW5_MOUSE F-box/WD repeat-containing protein 5 OS=Mus musculus GN=Fbxw5 PE=1
SV=1
Length = 573
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 481 TGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADPLK 540
T G G G D+ + L+ + +I + G + D++ ++N+ W P V ADP++
Sbjct: 380 TAGPVLGEGRGSDAFFDALDHVIDVHGHI-IGMGLSPDNRYLYVNSRAWPPGSVVADPMQ 438
Query: 541 GSRNRRKVDIL 551
++D+L
Sbjct: 439 PPPIAEEIDLL 449
>sp|Q4KLI9|FBXW5_RAT F-box/WD repeat-containing protein 5 OS=Rattus norvegicus GN=Fbxw5
PE=2 SV=1
Length = 569
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 481 TGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADPLK 540
T G G G D+ + L+ + +I + G + D++ ++N+ W P V ADP++
Sbjct: 380 TAGPVLGEGRGSDAFFDALDHVIDVHGHI-IGMGLSPDNRYLYVNSRAWPPGSVVADPMQ 438
Query: 541 GSRNRRKVDIL 551
++D+L
Sbjct: 439 PPPIAEEIDLL 449
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 320,389,973
Number of Sequences: 539616
Number of extensions: 14281084
Number of successful extensions: 41003
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 40923
Number of HSP's gapped (non-prelim): 68
length of query: 846
length of database: 191,569,459
effective HSP length: 126
effective length of query: 720
effective length of database: 123,577,843
effective search space: 88976046960
effective search space used: 88976046960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)