BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003122
(846 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/821 (67%), Positives = 671/821 (81%), Gaps = 10/821 (1%)
Query: 20 THSNTLKPPLKIHCNAKRKPKP---DPSSPFKGRRSGLVDYDKGQHEVSTQVSGLRKSDI 76
T+ + PP + R KP S F+ ++S V+YD+G+HEVS + GLRK+DI
Sbjct: 5 TNFKLVTPP-----ESSRADKPGATKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADI 59
Query: 77 PRRHRLAVEGNRFQKDWSVSEVVERVLELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQ 136
PRR+R+ VE +RFQKDWSVSEVV+R++ L +E+V+GVLN WVGRFARKNFP LI+E+++
Sbjct: 60 PRRYRIRVENDRFQKDWSVSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSR 119
Query: 137 RGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAE 196
RG I VF WMK QKNYCARNDIYNMMIRLHARHN +D+ARGLFFEMQKW CKPDAE
Sbjct: 120 RGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAE 179
Query: 197 TYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKM 256
TY+ALI+AHGRAGQWRWAMN+ DDMLRAA+APSRSTYNNLINACGS+GNWREAL+VCKKM
Sbjct: 180 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 239
Query: 257 TENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQY 316
T+NGVGPDLVTHNIVLSAYK+G QYSKALSYFELMKG +RPDTTT NI+IYCL KLGQ
Sbjct: 240 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 299
Query: 317 DKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYN 376
+A+DLF+SMREKR+EC PD+VTFTSI+HLYSV G+IENC+ VF M+AEGLKPNIVSYN
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 377 ALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRIN 436
ALM AYA HGMS ALSV +IK+NG+ PD+VSYT LLN+YGRS+QP KA+EVF MMR
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 437 NLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNI 496
KPN+V+Y+ALIDAYGSNG LAEAVE+FR+MEQDGI+PN+VS+CTLLAAC R +KVN+
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 497 DAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISS 556
D VL AA+ R I LNT AYNSAIGSY+N E EKAIALY+ M+K+KV DSVT+T+LIS
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Query: 557 CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
CR+S+Y EA+ +L EM DL IPLT +VYSSV+ AYSKQG + EAES+FN MKM+GC PD
Sbjct: 540 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 599
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAE 676
VI YT+MLHAYN +E W KAC LFLEME N IEPDSIACSALMRAFNKGGQPS V ++ +
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 677 FMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSG 736
MRE++I F+ ++FFE+ AC+ L++WK IDLI+ M+P +SIGL NQ+LHL GKSG
Sbjct: 660 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG 719
Query: 737 RIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFR 796
++E+MMKLF+KI++SG N TY+ILL++LLA GNWRKYIEVL+WM AGIQPS M+R
Sbjct: 720 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 779
Query: 797 DIVSFAQTRGGAEYAAIIQERIESLRMKSGD--PSFDQQST 835
DI+SF + G E+ +I++++ESLR K P+F + T
Sbjct: 780 DIISFGERSAGIEFEPLIRQKLESLRNKGEGLIPTFRHEGT 820
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/632 (25%), Positives = 312/632 (49%), Gaps = 3/632 (0%)
Query: 169 LHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAP 228
H + + +A F + + ++ D +IS G+ G+ A N+F+ + +
Sbjct: 147 FHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSL 206
Query: 229 SRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAY-KNGAQYSKALSY 287
+Y +LI+A ++G +REA+ V KKM E+G P L+T+N++L+ + K G ++K S
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 288 FELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLY 347
E MK I PD T+N +I C + + +A +F M K + D VT+ +++ +Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM--KAAGFSYDKVTYNALLDVY 324
Query: 348 SVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDI 407
+ + + V N M+ G P+IV+YN+L++AYA GM EA+ + N++ + G PD+
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 408 VSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFRE 467
+YT+LL+ + R+ + A +F MR KPN+ +++A I YG+ G E +++F E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 468 MEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGE 527
+ G+ P+IV+ TLLA G+ G + V + +N+ I +Y G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 528 YEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSS 587
+E+A+ +Y+ M V PD TY ++++ R + ++ L EM D + Y S
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 588 VISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNN 647
++ AY+ I S+ + P + ++ + + +A F E++
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 648 IEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTI 707
PD ++++ + + +K V ++M+E+ T S + + ++ S D+ +
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 708 DLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNL 767
++++++ I N +++ ++ R+ ++F ++ +SG + TY+ + +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 768 LAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV 799
A + + I V+++M G +P+ + IV
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 269/558 (48%), Gaps = 44/558 (7%)
Query: 145 QVFNWMKNQKNYCA--RNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALI 202
+ F+W QK+Y + N + ++I + + ++ A +F +Q+ D +Y +LI
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 203 SAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGN-WREALKVCKKMTENGV 261
SA +G++R A+N+F M P+ TYN ++N G G W + + +KM +G+
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 262 GPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT--------------------------- 294
PD T+N +++ K G+ + +A FE MK
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 295 --------NIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHL 346
P T+N +I + G D+A++L + M EK ++ PD+ T+T+++
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK--PDVFTYTTLLSG 393
Query: 347 YSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPD 406
+ G++E+ +F M G KPNI ++NA + Y + G E + +F+EI GL PD
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 407 IVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFR 466
IV++ +LL +G++ + VF M+ P +++ LI AY G +A+ V+R
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 467 EMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRD--IKLNTVAYNSAIGSYMN 524
M G+ P++ + T+LAA R G + VL AEM D K N + Y S + +Y N
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL--AEMEDGRCKPNELTYCSLLHAYAN 571
Query: 525 VGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQV 584
E +L + + + P +V L+ C + EA E+ +
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 585 YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEME 644
+S++S Y ++ ++A+A + + MK G +P + TY ++++ ++ + D+ K+ + E+
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 645 TNNIEPDSIACSALMRAF 662
I+PD I+ + ++ A+
Sbjct: 692 AKGIKPDIISYNTVIYAY 709
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/590 (25%), Positives = 263/590 (44%), Gaps = 41/590 (6%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDI-YNMMIRLHARHNQI-DKARGLFFEMQ 187
LI G + VF M +++ C I YN+++ + + +K L +M+
Sbjct: 214 LISAFANSGRYREAVNVFKKM--EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 188 KWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWR 247
PDA TYN LI+ R + A +F++M A + + TYN L++ G + +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 248 EALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVI 307
EA+KV +M NG P +VT+N ++SAY +A+ M +PD T+ ++
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 308 YCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEG 367
+ G+ + A+ +F MR + C P+I TF + I +Y G+ +F+ + G
Sbjct: 392 SGFERAGKVESAMSIFEEMRN--AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 368 LKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAR 427
L P+IV++N L+A + +GM E VF E+K+ G P+ ++ +L++AY R +A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 428 EVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAA- 486
V+ M + P+L +Y+ ++ A G+ ++ +V EME +PN ++ C+LL A
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 487 ----------------------------------CGRCGRKVNIDAVLLAAEMRDIKLNT 512
C +C + + R +
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 513 VAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDE 572
NS + Y KA + MK+R P TY L+ R + + ++ L E
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 573 MMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAED 632
++ I Y++VI AY + + +A +F+ M+ SG PDVITY + +Y
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 633 WEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQD 682
+E+A + M + P+ ++++ + K + + L E +R D
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 34/397 (8%)
Query: 420 SQQPVKAREVFNMMRINNLK---PNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPN 476
S+QP+ ++ N R K PNL + +GL + +V R + IEPN
Sbjct: 61 SRQPISSQTSRNRNRTRIGKSRDPNLGK------PWSYHGLSPQGQQVLRSL----IEPN 110
Query: 477 IVSICTLLAACGRCGRKVNIDAVL--LAAEMRDIKLNT----VAYNSAIGSYMNVGEYEK 530
S +D+VL L +D +T +A+ +G + +
Sbjct: 111 FDS--------------GQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALR 156
Query: 531 AIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVIS 590
A + K + M D+ ++IS + R S A + + + L Y+S+IS
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 591 AYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNT-AEDWEKACALFLEMETNNIE 649
A++ G EA ++F M+ GC P +ITY +L+ + W K +L +M+++ I
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276
Query: 650 PDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDL 709
PD+ + L+ +G + V E M+ ++ + ++ K + +
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 710 IKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLA 769
+ +M + SI N L+ + G ++ M+L ++ G + + TY+ LL
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 770 AGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRG 806
AG + + + M +AG +P+ F + RG
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 562 RYSEALGFLDEMM---DLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVI 618
++ AL D M D + L N V + +IS K+G ++ A +MFN ++ G S DV
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 619 TYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQP-SKVLLVAEF 677
+YT+++ A+ + + +A +F +ME + +P I + ++ F K G P +K+ + E
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 678 MREQDITFSDSIFFEMVLAC----SLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLG 733
M+ I D+ + ++ C SL ++ + +K S+ V+ N LL + G
Sbjct: 270 MKSDGIA-PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVT---YNALLDVYG 325
Query: 734 KSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYG 793
KS R + MK+ ++V +G + TY+ L+ G + +E+ M + G +P
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 794 MFRDIVSFAQTRGGAEYAAIIQERI 818
+ ++S + G E A I E +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEM 410
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 240 bits (612), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 274/559 (49%), Gaps = 27/559 (4%)
Query: 106 KHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNM 165
K+ DVE ++N+ + + RG+I +F KN + ND + +
Sbjct: 71 KYSYDVESLINK-------------LSSLPPRGSIARCLDIF------KNKLSLND-FAL 110
Query: 166 MIRLHARHNQIDKARGLFFEMQK--WRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLR 223
+ + A ++ LF MQ+ W CKP+ Y +IS GR G + +FD+M
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIW-CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPS 169
Query: 224 AAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSA-YKNGAQYS 282
V+ S +Y LINA G G + +L++ +M + P ++T+N V++A + G +
Sbjct: 170 QGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWE 229
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
L F M+ I+PD T+N ++ G D+A +F +M + +PD+ T++
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND--GGIVPDLTTYSH 287
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
++ + ++E + M + G P+I SYN L+ AYA G KEA+ VF++++ G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
P+ +Y+ LLN +G+S + R++F M+ +N P+ +Y+ LI+ +G G E V
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
+F +M ++ IEP++ + ++ ACG+ G + +L DI ++ AY I ++
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
YE+A+ + M + P T+ L+ S R E+ L ++D IP
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
+++ I AY + G EA + M+ S C PD T A+L Y+ A ++ F E
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 643 METNNIEPDSIACSALMRA 661
M+ ++I P SI C +M A
Sbjct: 588 MKASDILP-SIMCYCMMLA 605
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/604 (26%), Positives = 268/604 (44%), Gaps = 77/604 (12%)
Query: 82 LAVEGNRFQKDWSVSEVVERVLELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAIN 141
++VE ++ D V ++ ++ L + L+ + + + +F + KE RG
Sbjct: 65 VSVEKGKYSYD--VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQ 122
Query: 142 HSNQVFNWMKNQKNYCARND-IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNA 200
S ++F +M+ Q +C N+ IY +MI L R +DK +F EM +Y A
Sbjct: 123 RSLRLFKYMQRQI-WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTA 181
Query: 201 LISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG-NWREALKVCKKMTEN 259
LI+A+GR G++ ++ + D M ++PS TYN +INAC G +W L + +M
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 260 GVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKA 319
G+ PD+VT+N +LSA +A F M I PD TT++ ++ KL + +K
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 320 IDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPN-------- 371
DL M S LPDI ++ ++ Y+ +G I+ GVF+ M A G PN
Sbjct: 302 CDLLGEMASGGS--LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 372 ---------------------------IVSYNALMAAYASHGMSKEALSVFNEIKKNGLC 404
+YN L+ + G KE +++F+++ + +
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 405 PDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEV 464
PD+ +Y ++ A G+ AR++ M N++ P+ +Y+ +I+A+G L EA+
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVA 479
Query: 465 FREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMN 524
F M + G P+I + +LL + R G +A+L I N +N+ I +Y
Sbjct: 480 FNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQ 539
Query: 525 VGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQV 584
G++E+A+ Y M+K + PD T
Sbjct: 540 GGKFEEAVKTYVDMEKSRCDPDERT----------------------------------- 564
Query: 585 YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEME 644
+V+S YS L+ E F MK S P ++ Y ML Y E W+ L EM
Sbjct: 565 LEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
Query: 645 TNNI 648
+N +
Sbjct: 625 SNRV 628
Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 249/511 (48%), Gaps = 6/511 (1%)
Query: 244 GNWREALKVCKKMTEN-GVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTT 302
G+W+ +L++ K M P+ + I++S K L F+ M + +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 303 HNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNG-QIENCKGVFN 361
+ +I + G+Y+ +++L M+ ++ P I+T+ ++I+ + G E G+F
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKIS--PSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 362 TMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQ 421
M EG++P+IV+YN L++A A G+ EA VF + G+ PD+ +Y+ L+ +G+ +
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 422 QPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSIC 481
+ K ++ M P++ SY+ L++AY +G + EA+ VF +M+ G PN +
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 482 TLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKR 541
LL G+ GR ++ + L + + + YN I + G +++ + L+ M +
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 542 KVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEA 601
+ PD TY +I +C + + +A L M I +++ Y+ VI A+ + L EA
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 602 ESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRA 661
FN M G +P + T+ ++L+++ +++ A+ + + I + +A + A
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Query: 662 FNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLAC-SLLRDWKTTIDLIKQMEPSFHVV 720
+ +GG+ + + M E+ D E VL+ S R + ++M+ S +
Sbjct: 537 YKQGGKFEEAVKTYVDM-EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Query: 721 SIGLLNQLLHLLGKSGRIESMMKLFFKIVSS 751
SI +L + GK+ R + + +L +++S+
Sbjct: 596 SIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 159/371 (42%), Gaps = 74/371 (19%)
Query: 439 KPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDA 498
KPN Y+ +I G GLL + +EVF EM G+ ++ S L+ A GR GR
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGR------ 191
Query: 499 VLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCC 558
YE ++ L MK K+ P +TY +I++C
Sbjct: 192 -----------------------------YETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 559 RLSRYSEAL-GFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDV 617
R E L G EM I Y++++SA + +GL EAE +F M G PD+
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 618 ITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEF 677
TY+ ++ + EK C L EM + PD + + L+ A+ K G + +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM----- 337
Query: 678 MREQDITFSDSIFFEMVLA-CSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSG 736
+F +M A C+ P+ + S+ LL+L G+SG
Sbjct: 338 ----------GVFHQMQAAGCT----------------PNANTYSV-----LLNLFGQSG 366
Query: 737 RIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFR 796
R + + +LF ++ SS + + TY+IL++ G +++ + + M + I+P +
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 797 DIVSFAQTRGG 807
I+ FA +GG
Sbjct: 427 GII-FACGKGG 436
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 162/389 (41%), Gaps = 41/389 (10%)
Query: 126 NFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARN-DIYNMMIRLHARHNQIDKARGLFF 184
++ L++ + G+I + VF+ M Q C N + Y++++ L + + D R LF
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQM--QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 185 EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
EM+ PDA TYN LI G G ++ + +F DM+ + P TY +I ACG G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHN 304
+A K+ + MT N + P + V+ A+ A Y +AL F M P T +
Sbjct: 437 LHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 305 IVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTML 364
++Y + G ++ + + + S + TF + I Y G+ E + M
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVD--SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPV 424
P+ + A+++ Y+ + E F E+K + + P I+ Y +L YG++++
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614
Query: 425 KAREVFNMM---RINNLKP---------------------------------NLVSYSAL 448
E+ M R++N+ + Y+AL
Sbjct: 615 DVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNAL 674
Query: 449 IDAYGSNGLLAEAVEVFREMEQDGIEPNI 477
+DA G A V E + G+ P +
Sbjct: 675 LDALWWLGQKERAARVLNEATKRGLFPEL 703
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 2/276 (0%)
Query: 526 GEYEKAIALYKCMKKRK-VMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQV 584
G++++++ L+K M+++ P+ YT++IS R + L DEM + +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 585 YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA-YNTAEDWEKACALFLEM 643
Y+++I+AY + G + + + MK SP ++TY +++A DWE LF EM
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 644 ETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDW 703
I+PD + + L+ A G + +V M + I + + +V LR
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 704 KTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSIL 763
+ DL+ +M + I N LL KSG I+ M +F ++ ++G N NTYS+L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 764 LKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV 799
L +G + ++ M+ + P + ++
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 7/265 (2%)
Query: 156 YCARNDI------YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAG 209
Y NDI Y +I + ++A F M + P ET+++L+ + R G
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 506
Query: 210 QWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHN 269
+ + I ++ + + +R T+N I A G + EA+K M ++ PD T
Sbjct: 507 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 566
Query: 270 IVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREK 329
VLS Y + FE MK ++I P + +++ K ++D +L M
Sbjct: 567 AVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
Query: 330 RSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389
R + ++ I Y + + + V + + +EG I YNAL+ A G +
Sbjct: 627 RVSNIHQVIG-QMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKE 685
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLL 414
A V NE K GL P++ L+
Sbjct: 686 RAARVLNEATKRGLFPELFRKNKLV 710
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 37/150 (24%)
Query: 702 DWKTTIDLIKQME------PSFHVVSI--------GLLNQLLHLL--------------- 732
DW+ ++ L K M+ P+ H+ +I GLL++ L +
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSY 179
Query: 733 -------GKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAG-NWRKYIEVLQWME 784
G++GR E+ ++L ++ + + TY+ ++ G +W + + M
Sbjct: 180 TALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239
Query: 785 DAGIQPSYGMFRDIVSFAQTRGGAEYAAII 814
GIQP + ++S RG + A ++
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 175/689 (25%), Positives = 317/689 (46%), Gaps = 53/689 (7%)
Query: 193 PDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALK- 251
PD TY LI RAG+ ++++ + L+ + +A+
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 252 VCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELM---KGTNIRPDTTTHNIVIY 308
V ++MTE G P++ ++NI+L + + +AL +M +G PD ++ VI
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 309 CLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGL 368
K G DKA +H M ++ LPD+VT+ SII ++ V NTM+ G+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDR--GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 369 KPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKARE 428
P+ ++YN+++ Y S G KEA+ +++ +G+ PD+V+Y+ L++ ++ + ++AR+
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 429 VFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACG 488
+F+ M LKP + +Y L+ Y + G L E + M ++GI P+ L+ A
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 489 RCGRKVNIDAVLLAAEMRDIKL--NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPD 546
+ G KV+ A+L+ ++MR L N V Y + IG G E A+ ++ M + P
Sbjct: 383 KQG-KVD-QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 547 SVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFN 606
++ Y LI C +++ A + EM+D I L ++S+I ++ K+G + E+E +F
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 607 MMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGG 666
+M G P+VITY +++ Y A ++A L M + ++P+++ S L+ + K
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 667 QPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTI--DLIKQMEPSFHVVSIGL 724
+ L++ + M ++ D I + ++L L + +T +L ++ S + +
Sbjct: 561 RMEDALVLFKEMESSGVS-PDIITYNIILQ-GLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 725 LNQLLHLLGKS-----------------------------------GRIESMMKLFFKIV 749
N +LH L K+ GR + LF
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678
Query: 750 SSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRG--- 806
S+G N+ TY ++ +N++ G + ++ MED G GM IV RG
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 738
Query: 807 -GAEYAAIIQERIESLRMKSGDPSFDQQS 834
Y ++I E+ SL + D S
Sbjct: 739 RAGTYLSMIDEKHFSLEASTASLFIDLLS 767
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 250/537 (46%), Gaps = 9/537 (1%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN +I + +DKA + M K PD TYN+++ + +GQ + A+ M
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
V P TY+ L++ G EA K+ MT+ G+ P++ T+ +L Y
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+ +LM I PD +I+I K G+ D+A+ +F MR++ P+ VT+ +
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN--PNAVTYGA 411
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I + +G++E+ F M+ EGL P + YN+L+ + + A + E+ G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+C + + + S+++++ + + +++ ++F +M +KPN+++Y+ LI+ Y G + EA+
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRD--IKLNTVAYNSAIG 520
++ M G++PN V+ TL+ G C DA++L EM + + + YN +
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLIN--GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
A LY + + + TY +++ C+ +AL + + + L
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 649
Query: 581 TNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALF 640
+ ++ +I A K G EA+ +F +G P+ TY M E+ LF
Sbjct: 650 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Query: 641 LEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITF---SDSIFFEMV 694
L ME N DS + ++R + G+ ++ + E+ + + S+F +++
Sbjct: 710 LSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 222/500 (44%), Gaps = 41/500 (8%)
Query: 296 IRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIEN 355
+ PD T+ I+I C + G+ D ++ +K D + FT ++ + + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV--DAIAFTPLLKGLCADKRTSD 140
Query: 356 CKG-VFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEI---KKNGLCPDIVSYT 411
V M G PN+ SYN L+ S+EAL + + + + G PD+VSYT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 412 SLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQD 471
+++N + + KA ++ M + P++V+Y+++I A + +A+EV M ++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 472 GIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKA 531
G+ P+ ++ YNS + Y + G+ ++A
Sbjct: 261 GVMPDCMT-----------------------------------YNSILHGYCSSGQPKEA 285
Query: 532 IALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISA 591
I K M+ V PD VTY++L+ C+ R EA D M + Y +++
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 592 YSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPD 651
Y+ +G + E + ++M +G PD ++ ++ AY ++A +F +M + P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 652 SIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIK 711
++ A++ K G+ +L E M ++ ++ + ++ ++ W+ +LI
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 712 QMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAG 771
+M ++ N ++ K GR+ KLF +V G + N TY+ L+ AG
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 772 NWRKYIEVLQWMEDAGIQPS 791
+ +++L M G++P+
Sbjct: 526 KMDEAMKLLSGMVSVGLKPN 545
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 10/257 (3%)
Query: 154 KNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRW 213
+ C +N +I H + ++ ++ LF M + KP+ TYN LI+ + AG+
Sbjct: 470 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 529
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
AM + M+ + P+ TY+ LIN +AL + K+M +GV PD++T+NI+L
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
+ + A + + + + + +T+NI+++ L K D A+ +F ++ C
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL------C 643
Query: 334 LPDIV----TFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389
L D+ TF +I G+ + K +F + GL PN +Y + G+ +
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Query: 390 EALSVFNEIKKNGLCPD 406
E +F ++ NG D
Sbjct: 704 ELDQLFLSMEDNGCTVD 720
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 232 bits (592), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 303/659 (45%), Gaps = 39/659 (5%)
Query: 143 SNQVFNWMKNQKNYCARN-DIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNAL 201
S+ VF + C N +Y+++IR++ R I + +F M + P T NA+
Sbjct: 105 SSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 202 ISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGV 261
+ + ++G+ + +ML+ + P +T+N LIN + G++ ++ + +KM ++G
Sbjct: 165 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 224
Query: 262 GPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAID 321
P +VT+N VL Y ++ A+ + MK + D T+N++I+ L + + K
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 322 LFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAA 381
L MR++ P+ VT+ ++I+ +S G++ + N ML+ GL PN V++NAL+
Sbjct: 285 LLRDMRKRMIH--PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 342
Query: 382 YASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPN 441
+ S G KEAL +F ++ GL P VSY LL+ ++ + AR + M+ N +
Sbjct: 343 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 402
Query: 442 LVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLL 501
++Y+ +ID NG L EAV + EM +DGI+P+IV+ L+ + GR ++
Sbjct: 403 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 462
Query: 502 AAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLS 561
+ N + Y++ I + +G ++AI +Y+ M D T+ VL++S C+
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Query: 562 RYSEALGFL-----------------------------------DEMMDLKIPLTNQVYS 586
+ +EA F+ DEM + T Y
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582
Query: 587 SVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETN 646
S++ K G + EAE + + D + Y +L A + + KA +LF EM
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 647 NIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFE-MVLACSLLRDWKT 705
+I PDS ++L+ + G+ +L A+ + + + + V WK
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 706 TIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILL 764
I +QM+ H I N ++ + G+IE L ++ + N TY+ILL
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/654 (25%), Positives = 298/654 (45%), Gaps = 39/654 (5%)
Query: 136 QRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDA 195
++G + ++ + MK+ K A YNM+I R N+I K L +M+K P+
Sbjct: 240 KKGRFKAAIELLDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 196 ETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKK 255
TYN LI+ G+ A + ++ML ++P+ T+N LI+ S GN++EALK+
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 256 MTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQ 315
M G+ P V++ ++L A++ A ++ MK + T+ +I L K G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 316 YDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSY 375
D+A+ L + M + + PDIVT++++I+ + G+ + K + + GL PN + Y
Sbjct: 419 LDEAVVLLNEMSKDGID--PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 376 NALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRI 435
+ L+ G KEA+ ++ + G D ++ L+ + ++ + +A E M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 436 NNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVN 495
+ + PN VS+ LI+ YG++G +A VF EM + G P + +LL + G
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596
Query: 496 IDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLIS 555
+ L + ++TV YN+ + + G KA++L+ M +R ++PDS TYT LIS
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Query: 556 SCCRLSRYSEALGFLDEMMDLKIPLTNQV-YSSVISAYSKQGLIAEAESMFNMMKMSGCS 614
CR + A+ F E L N+V Y+ + K G M G +
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716
Query: 615 PDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLV 674
PD++T AM+ Y+ EK L EM N P+ + L+ ++K
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK---------- 766
Query: 675 AEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGK 734
+D++ S ++ ++L +L D T H + +G+ +
Sbjct: 767 -----RKDVSTSFLLYRSIILN-GILPDKLTC-----------HSLVLGIC--------E 801
Query: 735 SGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGI 788
S +E +K+ + G E + T+++L+ A G ++++ M GI
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 145/653 (22%), Positives = 274/653 (41%), Gaps = 4/653 (0%)
Query: 149 WMKNQKN-YCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGR 207
+M+ ++N C Y MI ++ +D+A L EM K PD TY+ALI+ +
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 450
Query: 208 AGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVT 267
G+++ A I + R ++P+ Y+ LI C G +EA+++ + M G D T
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510
Query: 268 HNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMR 327
N+++++ + ++A + M I P+T + + +I G+ KA +F M
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 328 EKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGM 387
+ P T+ S++ G + + ++ A + V YN L+ A G
Sbjct: 571 KVGHH--PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 388 SKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRI-NNLKPNLVSYS 446
+A+S+F E+ + + PD +YTSL++ R + V A N+ PN V Y+
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 447 ALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMR 506
+D G + +M+ G P+IV+ ++ R G+ + +L +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 507 DIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEA 566
+ N YN + Y + + LY+ + ++PD +T L+ C +
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808
Query: 567 LGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA 626
L L + + + ++ +IS G I A + +M G S D T AM+
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Query: 627 YNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFS 686
N ++++ + EM I P+S L+ + G +V E M I
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 928
Query: 687 DSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFF 746
+ MV A + L++ M V +I L+HL K+G + ++L
Sbjct: 929 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 988
Query: 747 KIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV 799
+ + G + + +Y++L+ L A G+ E+ + M+ G + ++ ++
Sbjct: 989 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/593 (22%), Positives = 251/593 (42%), Gaps = 43/593 (7%)
Query: 231 STYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFEL 290
S Y+ LI G +++L++ + M G P + T N +L + + S+ +
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 291 MKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVN 350
M I PD T NI+I L G ++K+ L M ++S P IVT+ +++H Y
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM--EKSGYAPTIVTYNTVLHWYCKK 241
Query: 351 GQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSY 410
G+ + + + M ++G+ ++ +YN L+ + + +++K + P+ V+Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 411 TSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQ 470
+L+N + + + A ++ N M L PN V+++ALID + S G EA+++F ME
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNID---AVLLAAEMRDIKLNTVAYNSAIGSYMNVGE 527
G+ P+ VS LL G C + D + + + + + Y I G
Sbjct: 362 KGLTPSEVSYGVLLD--GLC-KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 528 YEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSS 587
++A+ L M K + PD VTY+ LI+ C++ R+ A + + + + +YS+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 588 VISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNN 647
+I + G + EA ++ M + G + D T+ ++ + A +A M ++
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 648 IEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTI 707
I P++++ L+ + G+ K S+F EM
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAF---------------SVFDEMTKV----------- 572
Query: 708 DLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNL 767
P+F LL L K G + K + + A + Y+ LL +
Sbjct: 573 ----GHHPTFFTYG-----SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 768 LAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIES 820
+GN K + + M I P + ++S +G A + + E+
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 101/248 (40%), Gaps = 35/248 (14%)
Query: 584 VYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEM 643
VY +I Y ++G+I ++ +F +M + G +P V T A+L + + + + EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 644 ETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDW 703
I PD + L+ G +F S +
Sbjct: 185 LKRKICPDVATFNILINVLCAEG-----------------SFEKSSY------------- 214
Query: 704 KTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSIL 763
L+++ME S + +I N +LH K GR ++ ++L + S G +A+ TY++L
Sbjct: 215 -----LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 269
Query: 764 LKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRM 823
+ +L + K +L+ M I P+ + +++ G A+ + + S +
Sbjct: 270 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 824 KSGDPSFD 831
+F+
Sbjct: 330 SPNHVTFN 337
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/733 (22%), Positives = 333/733 (45%), Gaps = 45/733 (6%)
Query: 94 SVSEVVERVLELKHYEDVEGVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWM 150
++S ++ +++ +H+ + N V R + + +I+ + + ++ + ++ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 151 KNQKNYCARNDI-YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAG 209
+ C N + YN++I + ++ +A G+ ++ KPD TY L+ +
Sbjct: 254 --EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 210 QWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHN 269
++ + + D+ML +PS + ++L+ G EAL + K++ + GV P+L +N
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 270 IVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREK 329
++ + G ++ +A F+ M +RP+ T++I+I + G+ D A+ M +
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 330 RSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389
+ + + S+I+ + G I +G M+ + L+P +V+Y +LM Y S G
Sbjct: 432 GLKL--SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449
+AL +++E+ G+ P I ++T+LL+ R+ A ++FN M N+KPN V+Y+ +I
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 450 DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIK 509
+ Y G +++A E +EM + GI P+ S L+ G+ + + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 510 LNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGF 569
LN + Y + + G+ E+A+++ + M +R V D V Y VLI + G
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 570 LDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNT 629
L EM D + + +Y+S+I A SK G EA ++++M GC P+ +TYTA+++
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 630 AEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSI 689
A +A L +M+ + P+ + + KG ++ ++
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG----------------EVDMQKAV 773
Query: 690 FFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIV 749
+ LL + T N L+ + GRIE +L +++
Sbjct: 774 ELHNAILKGLLANTAT-------------------YNMLIRGFCRQGRIEEASELITRMI 814
Query: 750 SSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAE 809
G + TY+ ++ L + +K IE+ M + GI+P + ++ G E
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG--E 872
Query: 810 YAAIIQERIESLR 822
+ R E LR
Sbjct: 873 MGKATELRNEMLR 885
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 245/545 (44%), Gaps = 14/545 (2%)
Query: 269 NIVLSAYKNGAQYSKALSYFELM-KGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMR 327
++++ Y + + F++M ++ P+ T + +++ LVK + A++LF+ M
Sbjct: 160 DLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV 219
Query: 328 EKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGM 387
PD+ +T +I + K + M A G NIV YN L+
Sbjct: 220 SVGIR--PDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 388 SKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSA 447
EA+ + ++ L PD+V+Y +L+ + Q+ E+ + M P+ + S+
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 448 LIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRD 507
L++ G + EA+ + + + G+ PN+ L+ + + GRK + +A LL M
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK-GRKFH-EAELLFDRMGK 395
Query: 508 IKL--NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSE 565
I L N V Y+ I + G+ + A++ M + Y LI+ C+ S
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 566 ALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLH 625
A GF+ EM++ K+ T Y+S++ Y +G I +A +++ M G +P + T+T +L
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 626 AYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDI-- 683
A A LF EM N++P+ + + ++ + + G SK + M E+ I
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 684 -TFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMM 742
T+S + + K +D + + + + LLH + G++E +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC---YTGLLHGFCREGKLEEAL 632
Query: 743 KLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFA 802
+ ++V G + + Y +L+ L + + + +L+ M D G++P ++ ++ A
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID-A 691
Query: 803 QTRGG 807
+++ G
Sbjct: 692 KSKTG 696
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 178/440 (40%), Gaps = 36/440 (8%)
Query: 410 YTSLLNAYGRSQQPVKAREVFNMMRIN-NLKPNLVSYSALIDAYGSNGLLAEAVEVFREM 468
+ L+ Y RS++ + VF MM +L P + + SAL+ A+E+F +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 469 EQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEY 528
GI P++ ++ + ++ E +N V YN I +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+A+ + K + + + PD VTY L+ C++ + L +DEM+ L+ + SS+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
+ K+G I EA ++ + G SP++ Y A++ + + +A LF M +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 649 EPDSIACSALMRAFNKGGQPSKVL--------------------LVAEFMREQDITFSDS 688
P+ + S L+ F + G+ L L+ + DI+ ++
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 689 IFFEM---------VLACSLLRDW------KTTIDLIKQMEPSFHVVSIGLLNQLLHLLG 733
EM V SL+ + + L +M SI LL L
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 734 KSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYG 793
++G I +KLF ++ + N TY+++++ G+ K E L+ M + GI P
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 794 MFRDIVSFAQTRGGAEYAAI 813
+R ++ G A A +
Sbjct: 579 SYRPLIHGLCLTGQASEAKV 598
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%)
Query: 133 EITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCK 192
+I +G ++ V K A YNM+IR R +I++A L M
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Query: 193 PDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKV 252
PD TY +I+ R + A+ +++ M + P R YN LI+ C G +A ++
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Query: 253 CKKMTENGVGPD 264
+M G+ P+
Sbjct: 880 RNEMLRQGLIPN 891
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 268/553 (48%), Gaps = 5/553 (0%)
Query: 145 QVFNWMKNQKNYCARND-IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALIS 203
++ N + + + C ND +++++IR + + ++ +A F ++ + NALI
Sbjct: 149 EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208
Query: 204 AHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGP 263
+ R G A ++ ++ R+ V + T N ++NA G + ++ E GV P
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 264 DLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLF 323
D+VT+N ++SAY + +A M G P T+N VI L K G+Y++A ++F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 324 HSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYA 383
M RS PD T+ S++ G + + VF+ M + + P++V ++++M+ +
Sbjct: 329 AEML--RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 384 SHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLV 443
G +AL FN +K+ GL PD V YT L+ Y R A + N M ++V
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 444 SYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAA 503
+Y+ ++ +L EA ++F EM + + P+ ++ L+ + G N +
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 504 EMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRY 563
+ + I+L+ V YN+ + + VG+ + A ++ M ++++P ++Y++L+++ C
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 564 SEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAM 623
+EA DEM+ I T + +S+I Y + G ++ ES M G PD I+Y +
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 624 LHAYNTAEDWEKACALF--LEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQ 681
++ + E+ KA L +E E + PD ++++ F + Q + +V M E+
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 682 DITFSDSIFFEMV 694
+ S + M+
Sbjct: 687 GVNPDRSTYTCMI 699
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 234/493 (47%), Gaps = 10/493 (2%)
Query: 164 NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLR 223
N+M+ + +++K ++Q+ PD TYN LISA+ G A + + M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 224 AAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTH-NIVLSAYKNGAQYS 282
+P TYN +IN G + A +V +M +G+ PD T+ ++++ A K G
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG-DVV 357
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+ F M+ ++ PD + ++ + G DKA+ F+S++E + +PD V +T
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE--AGLIPDNVIYTI 415
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I Y G I + N ML +G ++V+YN ++ M EA +FNE+ +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
L PD + T L++ + + A E+F M+ ++ ++V+Y+ L+D +G G + A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIG 520
E++ +M I P +S L+ A C + +A + EM ++IK + NS I
Sbjct: 536 EIWADMVSKEILPTPISYSILVNAL--CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
Y G + + M +PD ++Y LI R S+A G + +M + + L
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 581 TNQV--YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACA 638
V Y+S++ + +Q + EAE + M G +PD TYT M++ + + ++ +A
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 639 LFLEMETNNIEPD 651
+ EM PD
Sbjct: 714 IHDEMLQRGFSPD 726
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 145/631 (22%), Positives = 279/631 (44%), Gaps = 30/631 (4%)
Query: 166 MIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAA 225
MI + R ++ A+ M + E N+L S G ++FD ++R
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND---SVFDLLIRTY 175
Query: 226 VAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKAL 285
V + REA + + G + N ++ + A
Sbjct: 176 VQARK---------------LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 286 SYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIH 345
++ + + + + T NI++ L K G+ +K ++EK PDIVT+ ++I
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK--GVYPDIVTYNTLIS 278
Query: 346 LYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCP 405
YS G +E + N M +G P + +YN ++ HG + A VF E+ ++GL P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 406 DIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVF 465
D +Y SLL + V+ +VF+ MR ++ P+LV +S+++ + +G L +A+ F
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 466 REMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIGSYM 523
+++ G+ P+ V I T+L G C + + A+ L EM + ++ V YN+ +
Sbjct: 399 NSVKEAGLIPDNV-IYTILIQ-GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 524 NVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQ 583
+A L+ M +R + PDS T T+LI C+L A+ +M + +I L
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 584 VYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEM 643
Y++++ + K G I A+ ++ M P I+Y+ +++A + +A ++ EM
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 644 ETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRD- 702
+ NI+P + C+++++ + + G S E M + D I + L +R+
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYN-TLIYGFVREE 634
Query: 703 -WKTTIDLIKQMEPSFH--VVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNT 759
L+K+ME V + N +LH + +++ + K++ G + +T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 760 YSILLKNLLAAGNWRKYIEVLQWMEDAGIQP 790
Y+ ++ ++ N + + M G P
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 206/472 (43%), Gaps = 35/472 (7%)
Query: 320 IDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALM 379
+++ +S+ S C + F +I Y ++ F + ++G +I + NAL+
Sbjct: 148 LEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALI 207
Query: 380 AAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLK 439
+ G + A V+ EI ++G+ ++ + ++NA + + K + ++ +
Sbjct: 208 GSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY 267
Query: 440 PNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAV 499
P++V+Y+ LI AY S GL+ EA E+ M G P + + T++ + G+ V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 500 LLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCR 559
+ ++ Y S + G+ + ++ M+ R V+PD V ++ ++S R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 560 LSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVIT 619
+AL + + + + + N +Y+ +I Y ++G+I+ A ++ N M GC+ DV+T
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 620 YTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMR 679
Y +LH + +A LF EM + PDS + L+ K G + + + M+
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 680 EQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIE 739
E+ I +D++ N LL GK G I+
Sbjct: 508 EKRIR----------------------LDVVT-------------YNTLLDGFGKVGDID 532
Query: 740 SMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
+ +++ +VS +YSIL+ L + G+ + V M I+P+
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 40/384 (10%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
L+ E ++G + + +VF+ M++ ++ ++ M+ L R +DKA F +++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
PD Y LI + R G AMN+ ++ML+ A TYN +++ EA
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
K+ +MTE + PD T I++ + A+ F+ MK IR D T+N ++
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 310 LVKLGQYDKAIDLFHSMREKRSECLPDIVTFT---------------------------- 341
K+G D A +++ M K E LP ++++
Sbjct: 525 FGKVGDIDTAKEIWADMVSK--EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 342 -------SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSV 394
S+I Y +G + + M++EG P+ +SYN L+ + +A +
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 395 FNEIK--KNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAY 452
+++ + GL PD+ +Y S+L+ + R Q +A V M + P+ +Y+ +I+ +
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 453 GSNGLLAEAVEVFREMEQDGIEPN 476
S L EA + EM Q G P+
Sbjct: 703 VSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 199/455 (43%), Gaps = 20/455 (4%)
Query: 338 VTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNE 397
++ +++IH+ +G++ + + M+ + N+L + +++ G + SVF+
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND---SVFD- 169
Query: 398 IKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGL 457
L+ Y ++++ +A E F ++R ++ + +ALI + G
Sbjct: 170 --------------LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGW 215
Query: 458 LAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNS 517
+ A V++E+ + G+ N+ ++ ++ A + G+ + L + + + + V YN+
Sbjct: 216 VELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275
Query: 518 AIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLK 577
I +Y + G E+A L M + P TY +I+ C+ +Y A EM+
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 578 IPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKAC 637
+ + Y S++ K+G + E E +F+ M+ PD++ +++M+ + + + +KA
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 638 ALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLAC 697
F ++ + PD++ + L++ + + G S + + M +Q D + + +L
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM-DVVTYNTILHG 454
Query: 698 SLLRDWKTTID-LIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEAN 756
R D L +M L L+ K G +++ M+LF K+ +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 757 FNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
TY+ LL G+ E+ M I P+
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Score = 37.7 bits (86), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 652 SIACSALMRAFNKGGQPSKVLLVAEFMREQDITFS-----DSIFFEMVLACSLLRDWKTT 706
S A S L+R + G E + D TFS DS+F ++ R +
Sbjct: 130 SDAQSCLLRMIRRSGVSR-----LEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREA 184
Query: 707 IDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKN 766
+ + VSI N L+ L + G +E ++ +I SG N T +I++
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244
Query: 767 LLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYA 811
L G K L +++ G+ P + ++S ++G E A
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/618 (27%), Positives = 285/618 (46%), Gaps = 53/618 (8%)
Query: 37 RKPKPDPSSPFKGRRSGLVDYDKGQHEVSTQVSGLRKSDIPRRHRLAVEGNRFQK--DWS 94
+ PK D SS F GRRS VS G +K+ + RH A E + Q D+S
Sbjct: 126 QTPKSDLSSDFSGRRS--------TRFVSKMHFGRQKTTMATRHSSAAE-DALQNAIDFS 176
Query: 95 VSEVVERVLELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNW-MKNQ 153
+ + L L + G + ++I+E+ R + + + + +K +
Sbjct: 177 GDDEMFHSLMLSFESKLCG----------SDDCTYIIRELGNRNECDKAVGFYEFAVKRE 226
Query: 154 KNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRW 213
+ + + + MI R+ ++ A+ +F ++ALISA+GR+G
Sbjct: 227 RRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEE 286
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTG-NWREALKVCKKMTENGVGPDLVTHNIVL 272
A+++F+ M + P+ TYN +I+ACG G +++ K +M NGV PD +T N +L
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 273 SAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSE 332
+ G + A + F+ M I D ++N ++ + K GQ D A ++ M KR
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR-- 404
Query: 333 CLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEAL 392
+P++V+++++I ++ G+ + +F M G+ + VSYN L++ Y G S+EAL
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 393 SVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAY 452
+ E+ G+ D+V+Y +LL YG+ + + ++VF M+ ++ PNL++YS LID Y
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 453 GSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKL 510
GL EA+E+FRE + G+ ++V L+ A C + AV L EM I
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL--CKNGLVGSAVSLIDEMTKEGISP 582
Query: 511 NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYT---VLISSCCRLSRYSEAL 567
N V YNS I ++ + M S Y+ L S LS +E
Sbjct: 583 NVVTYNSIIDAF----------------GRSATMDRSADYSNGGSLPFSSSALSALTETE 626
Query: 568 G--FLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLH 625
G + L N+ + I E +F M P+V+T++A+L+
Sbjct: 627 GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILE---VFRKMHQLEIKPNVVTFSAILN 683
Query: 626 AYNTAEDWEKACALFLEM 643
A + +E A L E+
Sbjct: 684 ACSRCNSFEDASMLLEEL 701
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 218/461 (47%), Gaps = 70/461 (15%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDI--YNMMIRLHARHNQIDKARGLFF 184
F LI + G + VFN MK Y R ++ YN +I + K FF
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKE---YGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 185 -EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGST 243
EMQ+ +PD T+N+L++ R G W A N+FD+M + +YN L++A
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 244 GNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTH 303
G A ++ +M + P++V+++ V+ + ++ +AL+ F M+ I D ++
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 304 NIVIYCLVKLGQYDKAIDLFHSMREKRSECLP-DIVTFTSIIHLYSVNGQIENCKGVFNT 362
N ++ K+G+ ++A+D+ +RE S + D+VT+ +++ Y G+ + K VF
Sbjct: 448 NTLLSIYTKVGRSEEALDI---LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 363 MLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQ 422
M E + PN+++Y+ L+ Y+ G+ KEA+ +F E K GL D+V Y++L++A ++
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 423 PVKAREVFNMMRINNLKPNLVSYSALIDAYG-----------SNG--------------- 456
A + + M + PN+V+Y+++IDA+G SNG
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTE 624
Query: 457 ------------LLAEA------------------VEVFREMEQDGIEPNIVSICTLLAA 486
L E+ +EVFR+M Q I+PN+V+ +L A
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Query: 487 CGRCGRKVNIDAVLLAAEMR--DIKLNTVAYNSAIGSYMNV 525
C RC DA +L E+R D K+ V + +G NV
Sbjct: 685 CSRCNSFE--DASMLLEELRLFDNKVYGVVHGLLMGQRENV 723
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 198/380 (52%), Gaps = 9/380 (2%)
Query: 308 YCLVKLG---QYDKAIDL--FHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNT 362
Y + +LG + DKA+ F RE+R + + ++I G++ K +F T
Sbjct: 201 YIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLAS--AMISTLGRYGKVTIAKRIFET 258
Query: 363 MLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQ 422
A G + +++AL++AY G+ +EA+SVFN +K+ GL P++V+Y ++++A G+
Sbjct: 259 AFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 423 PVK-AREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSIC 481
K + F+ M+ N ++P+ +++++L+ GL A +F EM IE ++ S
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 482 TLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKR 541
TLL A + G+ +L ++ I N V+Y++ I + G +++A+ L+ M+
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 542 KVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEA 601
+ D V+Y L+S ++ R EAL L EM + I Y++++ Y KQG E
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 602 ESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRA 661
+ +F MK P+++TY+ ++ Y+ +++A +F E ++ + D + SAL+ A
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 662 FNKGGQ-PSKVLLVAEFMRE 680
K G S V L+ E +E
Sbjct: 559 LCKNGLVGSAVSLIDEMTKE 578
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 171/355 (48%), Gaps = 1/355 (0%)
Query: 411 TSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQ 470
+++++ GR + A+ +F + ++SALI AYG +GL EA+ VF M++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRD-IKLNTVAYNSAIGSYMNVGEYE 529
G+ PN+V+ ++ ACG+ G + A R+ ++ + + +NS + G +E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 530 KAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVI 589
A L+ M R++ D +Y L+ + C+ + A L +M +I YS+VI
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 590 SAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIE 649
++K G EA ++F M+ G + D ++Y +L Y E+A + EM + I+
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 650 PDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDL 709
D + +AL+ + K G+ +V V M+ + + + + ++ S +K +++
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 710 IKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILL 764
++ + + + L + L+ L K+G + S + L ++ G N TY+ ++
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 150/355 (42%), Gaps = 36/355 (10%)
Query: 446 SALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM 505
SA+I G G + A +F G + + L++A GR G +V + +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 506 RDIKLNTVAYNSAIGSYMNVG-EYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYS 564
++ N V YN+ I + G E+++ + M++ V PD +T+ L++ C R +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 565 EALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAML 624
A DEM + +I Y++++ A K G + A + M + P+V++Y+ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 625 HAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDIT 684
+ A +++A LF EM I D ++ + L+ + K G+ + L
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL------------ 464
Query: 685 FSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKL 744
D++++M + N LL GK G+ + + K+
Sbjct: 465 -----------------------DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 745 FFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV 799
F ++ N TYS L+ G +++ +E+ + + AG++ ++ ++
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 124/304 (40%), Gaps = 38/304 (12%)
Query: 524 NVGEYEKAIALYK--CMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLT 581
N E +KA+ Y+ ++R+ + +IS+ R + + A + T
Sbjct: 208 NRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNT 267
Query: 582 NQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAE-DWEKACALF 640
+S++ISAY + GL EA S+FN MK G P+++TY A++ A ++++ F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 641 LEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLL 700
EM+ N ++PD I ++L+ ++GG
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGL--------------------------------- 354
Query: 701 RDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTY 760
W+ +L +M + N LL + K G+++ ++ ++ N +Y
Sbjct: 355 --WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 761 SILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIES 820
S ++ AG + + + + M GI + ++S G +E A I + S
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 821 LRMK 824
+ +K
Sbjct: 473 VGIK 476
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 158/672 (23%), Positives = 311/672 (46%), Gaps = 64/672 (9%)
Query: 142 HSNQVFNWMKNQKNYC-ARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNA 200
+++ VF ++ + C + + +++++++ ++R + IDKA + Q P +YNA
Sbjct: 115 YASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNA 174
Query: 201 LISAHGRAGQ-WRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTEN 259
++ A R+ + +A N+F K+M E+
Sbjct: 175 VLDATIRSKRNISFAENVF-----------------------------------KEMLES 199
Query: 260 GVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKA 319
V P++ T+NI++ + AL+ F+ M+ P+ T+N +I KL + D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 320 IDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALM 379
L SM K E P+++++ +I+ G+++ V M G + V+YN L+
Sbjct: 260 FKLLRSMALKGLE--PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 380 AAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLK 439
Y G +AL + E+ ++GL P +++YTSL+++ ++ +A E + MR+ L
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 440 PNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAV 499
PN +Y+ L+D + G + EA V REM +G P++V+ L+ G C DA+
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN--GHCVTGKMEDAI 435
Query: 500 LLAAEMRDIKL--NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSC 557
+ +M++ L + V+Y++ + + + ++A+ + + M ++ + PD++TY+ LI
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 558 CRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDV 617
C R EA +EM+ + +P Y+++I+AY +G + +A + N M G PDV
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 618 ITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEF 677
+TY+ +++ N +A L L++ P + L+ + S V L+ F
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 678 MREQDITFSDSIFFEMV--------LACSLL-------RDWKTTIDLIKQMEPS---FHV 719
+ +T +D +F M+ A +++ D + L K+M S H
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 720 VSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEV 779
V++ L + LH K G++ + + ++ S + +L++ GN ++V
Sbjct: 676 VTVIALVKALH---KEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDV 732
Query: 780 LQWMEDAGIQPS 791
L M G P+
Sbjct: 733 LAEMAKDGFLPN 744
Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 200/440 (45%), Gaps = 23/440 (5%)
Query: 126 NFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFE 185
++ +I + + G + + V M N++ Y YN +I+ + + +A + E
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEM-NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 186 MQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGN 245
M + P TY +LI + +AG AM D M + P+ TY L++ G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 246 WREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNI 305
EA +V ++M +NG P +VT+N +++ + + A++ E MK + PD +++
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 306 VIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLA 365
V+ + D+A+ + M EK + PD +T++S+I + + + ++ ML
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIK--PDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 366 EGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVK 425
GL P+ +Y AL+ AY G ++AL + NE+ + G+ PD+V+Y+ L+N + + +
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 426 AREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLA 485
A+ + + P+ V+Y LI+ IE S+ +L+
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIE------------------NCSNIE--FKSVVSLIK 613
Query: 486 ACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMP 545
G D V + ++ K + AYN I + G+ KA LYK M K +
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Query: 546 DSVTYTVLISSCCRLSRYSE 565
+VT L+ + + + +E
Sbjct: 674 HTVTVIALVKALHKEGKVNE 693
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 134/323 (41%), Gaps = 4/323 (1%)
Query: 514 AYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSR-YSEALGFLDE 572
++ + SY + +KA+++ + MP ++Y ++ + R R S A E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 573 MMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAED 632
M++ ++ Y+ +I + G I A ++F+ M+ GC P+V+TY ++ Y
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 633 WEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFE 692
+ L M +EP+ I+ + ++ + G+ +V V M + + + +
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 693 MVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSG 752
++ ++ + + +M S+ L+H + K+G + M+ ++ G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 753 AEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAA 812
N TY+ L+ G + VL+ M D G PS + +++ G E A
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 813 IIQERIESLRMKSGDPSFDQQST 835
+ +E ++ K P ST
Sbjct: 436 AV---LEDMKEKGLSPDVVSYST 455
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
LIK +G + ++QVF M KN+ YN+MI H R I KA L+ EM K
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLG-KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
T AL+ A + G+ ++ +LR+ L+ GN
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVV 729
Query: 250 LKVCKKMTENGVGPD 264
L V +M ++G P+
Sbjct: 730 LDVLAEMAKDGFLPN 744
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 243/509 (47%), Gaps = 4/509 (0%)
Query: 146 VFNWMKNQKNYCARNDIYNM--MIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALIS 203
V + K + +D+Y M MI + R ++ A + K +PD T++ L++
Sbjct: 89 VLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148
Query: 204 AHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGP 263
G+ A+ + D M+ P T + LIN G EAL + +M E G P
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP 208
Query: 264 DLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLF 323
D VT+ VL+ + AL F M+ NI+ ++IVI L K G +D A+ LF
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 324 HSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYA 383
+ M K + D+VT++S+I +G+ ++ + M+ + P++V+++AL+ +
Sbjct: 269 NEMEMKGIK--ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 384 SHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLV 443
G EA ++NE+ G+ PD ++Y SL++ + + +A ++F++M +P++V
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 444 SYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAA 503
+YS LI++Y + + + +FRE+ G+ PN ++ TL+ + G+ +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 504 EMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRY 563
R + + V Y + + GE KA+ +++ M+K ++ Y ++I C S+
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 564 SEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAM 623
+A + D + Y+ +I K+G ++EA+ +F MK GC+PD TY +
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 624 LHAYNTAEDWEKACALFLEMETNNIEPDS 652
+ A+ + L EM+ DS
Sbjct: 567 IRAHLGGSGLISSVELIEEMKVCGFSADS 595
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 252/543 (46%), Gaps = 37/543 (6%)
Query: 248 EALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVI 307
+A+ + + M ++ P + N + SA QY L + + M+ I D T I+I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 308 YCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEG 367
C + + A + + E PD +TF+++++ + + G++ + + M+
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYE--PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 368 LKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAR 427
+P++V+ + L+ G EAL + + + + G PD V+Y +LN +S A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 428 EVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAAC 487
++F M N+K ++V YS +ID+ +G +A+ +F EME
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME------------------ 272
Query: 488 GRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDS 547
M+ IK + V Y+S IG N G+++ + + M R ++PD
Sbjct: 273 -----------------MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 548 VTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNM 607
VT++ LI + + EA +EM+ I Y+S+I + K+ + EA MF++
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 608 MKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQ 667
M GC PD++TY+ ++++Y A+ + LF E+ + + P++I + L+ F + G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 668 PSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQ 727
+ + + M + + S + ++ + +++ ++M+ S + IG+ N
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 728 LLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAG 787
++H + + +++ LF + G + + TY++++ L G+ + + + M++ G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 788 IQP 790
P
Sbjct: 556 CTP 558
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/552 (21%), Positives = 248/552 (44%), Gaps = 37/552 (6%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
+N + AR Q D G M+ + D T +I+ + R + +A ++
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ P T++ L+N G EA+ + +M E PDLVT + +++ + S
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+AL + M +PD T+ V+ L K G A+DLF M E+ + +V ++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK--ASVVQYSI 250
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I +G ++ +FN M +G+K ++V+Y++L+ + G + + E+
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PD+V++++L++ + + + ++A+E++N M + P+ ++Y++LID + L EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
++F M G EP+IV+ Y+ I SY
Sbjct: 371 QMFDLMVSKGCEPDIVT-----------------------------------YSILINSY 395
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
+ + L++ + + ++P+++TY L+ C+ + + A EM+ +P +
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
Y ++ G + +A +F M+ S + + Y ++H A + A +LF
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 643 METNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRD 702
+ ++PD + + ++ K G S+ ++ M+E T D + ++ A
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 703 WKTTIDLIKQME 714
++++LI++M+
Sbjct: 576 LISSVELIEEMK 587
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 210/487 (43%), Gaps = 53/487 (10%)
Query: 349 VNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIV 408
V+ ++ + +F +M+ P + +N L +A A L ++ NG+ D+
Sbjct: 47 VDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 409 SYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREM 468
+ T ++N Y R ++ + A V +P+ +++S L++ + G ++EAV + M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 469 EQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEY 528
+ P++V++ TL+ G C + G
Sbjct: 167 VEMKQRPDLVTVSTLIN--GLCLK---------------------------------GRV 191
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+A+ L M + PD VTY +++ C+ + AL +M + I + YS V
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I + K G +A S+FN M+M G DV+TY++++ W+ + EM NI
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFS---DSIFFEMVLA--C--SLLR 701
PD + SAL+ F K G+ LL A+ + + IT D+I + ++ C + L
Sbjct: 312 IPDVVTFSALIDVFVKEGK----LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 702 DWKTTIDLI--KQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNT 759
+ DL+ K EP SI L++ K+ R++ M+LF +I S G N T
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSI-----LINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 760 YSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIE 819
Y+ L+ +G E+ Q M G+ PS + ++ G A I E+++
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 820 SLRMKSG 826
RM G
Sbjct: 483 KSRMTLG 489
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
++ +I + + ++ +A+ L+ EM PD TYN+LI + A +FD M+
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
P TY+ LIN+ + +++ ++++ G+ P+ +T+N ++ + + +
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A F+ M + P T+ I++ L G+ +KA+++F M++ R I +
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL--GIGIYNI 495
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
IIH ++++ +F ++ +G+KP++V+YN ++ G EA +F ++K++G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALID 450
PD +Y L+ A+ + + E+ M++ + + +ID
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 141/302 (46%), Gaps = 6/302 (1%)
Query: 108 YEDVEGVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYN 164
++D +L +GR + F LI + G + + +++N M + YN
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT-RGIAPDTITYN 354
Query: 165 MMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRA 224
+I + N + +A +F M C+PD TY+ LI+++ +A + M +F ++
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 225 AVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKA 284
+ P+ TYN L+ +G A ++ ++M GV P +VT+ I+L + + +KA
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 285 LSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSII 344
L FE M+ + + +NI+I+ + + D A LF S+ +K + PD+VT+ +I
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK--PDVVTYNVMI 532
Query: 345 HLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLC 404
G + +F M +G P+ +YN L+ A+ ++ + E+K G
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Query: 405 PD 406
D
Sbjct: 593 AD 594
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
L+ Q G +N + ++F M + + Y +++ + +++KA +F +MQK
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
R YN +I A + A ++F + V P TYN +I G+ EA
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVI 307
+ +KM E+G PD T+NI++ A+ G+ ++ E MK D++T +VI
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 159/718 (22%), Positives = 315/718 (43%), Gaps = 52/718 (7%)
Query: 124 RKNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCA---RNDIYNMMIRLHARHNQIDKAR 180
R + L+K + G + +F W+ N A + + + +R+ R +Q A
Sbjct: 136 RTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAA 195
Query: 181 GLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINAC 240
L ++ D Y ++ A+ R G++ A+++F+ M +P+ TYN +++
Sbjct: 196 KLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF 255
Query: 241 GSTG-NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPD 299
G G +WR+ L V +M G+ D T + VLSA +A +F +K P
Sbjct: 256 GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG 315
Query: 300 TTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGV 359
T T+N ++ K G Y +A+ + M E + C D VT+ ++ Y G + GV
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEE--NSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 360 FNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGR 419
M +G+ PN ++Y ++ AY G EAL +F +K+ G P+ +Y ++L+ G+
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 420 SQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVS 479
+ + ++ M+ N PN +++ ++ G+ G+ VFREM+ G EP+ +
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 480 ICTLLAACGRCGRKVNIDAVLLAAEMRDIKLN--TVAYNSAIGSYMNVGEYEKAIALYKC 537
TL++A GRCG +V DA + EM N YN+ + + G++ +
Sbjct: 494 FNTLISAYGRCGSEV--DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 538 MKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGL 597
MK + P +Y++++ + Y + + + +I + + +++ A K
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 598 IAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSA 657
+A +E F + K G PD++ + +ML + +++A + + + + PD + ++
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 658 LMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSF 717
LM + + G+ C WK +++K +E S
Sbjct: 672 LMDMYVRRGE-----------------------------C-----WKAE-EILKTLEKSQ 696
Query: 718 HVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYI 777
+ N ++ + G ++ +++ ++ G TY+ + A G + +
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 778 EVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESL-RMKSGDPSFDQQS 834
+V++ M +P+ F+ +V G A E ++ + ++K+ DP FD QS
Sbjct: 757 DVIECMAKNDCRPNELTFKMVVD------GYCRAGKYSEAMDFVSKIKTFDPCFDDQS 808
Score = 183 bits (464), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 255/574 (44%), Gaps = 26/574 (4%)
Query: 163 YNMMIRLHARHNQI-DKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
YN+++ + + + K G+ EM+ K D T + ++SA R G R A F ++
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
P TYN L+ G G + EAL V K+M EN D VT+N +++AY
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
+A E+M + P+ T+ VI K G+ D+A+ LF+SM+E + C+P+ T+
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE--AGCVPNTCTYN 425
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKN 401
+++ L + + M + G PN ++N ++A + GM K VF E+K
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 402 GLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEA 461
G PD ++ +L++AYGR V A +++ M + +Y+AL++A G
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAV--------LLAAEM--RDIKLN 511
V +M+ G +P S +L + G + I+ + + + M R + L
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 512 TVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLD 571
+ GS E+A L+ KK PD V + ++S R + Y +A G L+
Sbjct: 606 NFKCRALAGS-------ERAFTLF---KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 572 EMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAE 631
+ + + Y+S++ Y ++G +AE + ++ S PD+++Y ++ +
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 632 DWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFF 691
++A + EM I P + + + G +++ V E M + D ++ F
Sbjct: 716 LMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFK 775
Query: 692 EMVLACSLLRDWKTTIDL---IKQMEPSFHVVSI 722
+V + +D IK +P F SI
Sbjct: 776 MVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSI 809
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 251/512 (49%), Gaps = 9/512 (1%)
Query: 171 ARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSR 230
A+ N+ D L +MQ + TY+ LI+ R Q A+ + M++ P
Sbjct: 92 AKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDI 151
Query: 231 STYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFEL 290
T N+L+N +A+ + +M E G PD T N ++ + S+A++ +
Sbjct: 152 VTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDR 211
Query: 291 MKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVN 350
M +PD T+ IV+ L K G D A+ L M + + E P +V + +II
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE--PGVVIYNTIIDALCNY 269
Query: 351 GQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSY 410
+ + +F M +G++PN+V+YN+L+ ++G +A + +++ + + P++V++
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 411 TSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQ 470
++L++A+ + + V+A ++++ M ++ P++ +YS+LI+ + + L EA +F M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIGSYMNVGEY 528
PN+V+ TL+ G C K + + L EM R + NTV Y + I + E
Sbjct: 390 KDCFPNVVTYNTLIK--GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+ A ++K M V+PD +TY++L+ C + AL + + K+ Y+ +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I K G + + +F + + G P+V+TYT M+ + E+A ALF EM+
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMRE 680
PDS + L+RA + G + AE +RE
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAA---SAELIRE 596
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 210/397 (52%), Gaps = 2/397 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
+N +I RHN+ +A L M C+PD TY +++ + G A+++ M
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ + P YN +I+A + N +AL + +M G+ P++VT+N ++ N ++S
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A M I P+ T + +I VK G+ +A L+ M ++ + PDI T++S
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSS 366
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I+ + ++ +++ K +F M+++ PN+V+YN L+ + E + +F E+ + G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
L + V+YT+L++ + ++++ A+ VF M + + P++++YS L+D +NG + A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
VF +++ +EP+I + ++ + G+ + + + ++ +K N V Y + + +
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCR 559
G E+A AL++ MK+ +PDS TY LI + R
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/572 (23%), Positives = 259/572 (45%), Gaps = 42/572 (7%)
Query: 248 EALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVI 307
+A+ + M ++ P +V + +LSA ++ +S E M+ I + T++I+I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 308 YCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEG 367
C + Q A+ + M + E PDIVT S+++ + +I + + M+ G
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYE--PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 368 LKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAR 427
+P+ ++N L+ H + EA+++ + + G PD+V+Y ++N + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 428 EVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAAC 487
+ M ++P +V Y+ +IDA + + +A+ +F EM+ GI PN+V+ +L+
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 488 GRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDS 547
GR + +L R I N V +++ I +++ G+ +A LY M KR + PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 548 VTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQV-YSSVISAYSKQGLIAEAESMFN 606
TY+ LI+ C R EA E+M K N V Y+++I + K + E +F
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 607 MMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGG 666
M G + +TYT ++H + A + + A +F +M ++ + PD + S L+ G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 667 QPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLN 726
+ L+V E+++ +MEP + +I
Sbjct: 481 KVETALVVFEYLQRS------------------------------KMEPDIYTYNI---- 506
Query: 727 QLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDA 786
++ + K+G++E LF + G + N TY+ ++ G + + + M++
Sbjct: 507 -MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 787 GIQPSYGMFRDIVSFAQTRGG--AEYAAIIQE 816
G P G + ++ A R G A A +I+E
Sbjct: 566 GPLPDSGTYNTLIR-AHLRDGDKAASAELIRE 596
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 192/364 (52%), Gaps = 6/364 (1%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
IYN +I + ++ A LF EM +P+ TYN+LI G+W A + DM
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
+ + P+ T++ LI+A G EA K+ +M + + PD+ T++ +++ + +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
+A FELM + P+ T+N +I K + D+ ++LF M ++ + + VT+T
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR--GLVGNTVTYT 435
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKN 401
++IH + + +N + VF M+++G+ P+I++Y+ L+ ++G + AL VF ++++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 402 GLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEA 461
+ PDI +Y ++ ++ + ++F + + +KPN+V+Y+ ++ + GL EA
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGS 521
+FREM+++G P+ + TL+ A R G K + L EMR + V S IG
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA--SAELIREMRSCRF--VGDASTIGL 611
Query: 522 YMNV 525
N+
Sbjct: 612 VTNM 615
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 191/387 (49%), Gaps = 2/387 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y +++ + ID A L +M++ + +P YN +I A A+N+F +M
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ P+ TYN+LI + G W +A ++ M E + P++VT + ++ A+ +
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+A ++ M +I PD T++ +I + D+A +F M K +C P++VT+ +
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK--DCFPNVVTYNT 401
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I + +++ +F M GL N V+Y L+ + A VF ++ +G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PDI++Y+ LL+ + + A VF ++ + ++P++ +Y+ +I+ G + +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
++F + G++PN+V+ T+++ R G K DA+ + ++ YN+ I ++
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVT 549
+ G+ + L + M+ + + D+ T
Sbjct: 582 LRDGDKAASAELIREMRSCRFVGDAST 608
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/509 (23%), Positives = 239/509 (46%), Gaps = 9/509 (1%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
+ D A++LF M + R P IV F+ ++ + + + + M G+ N+ +
Sbjct: 61 KLDDAVNLFGDMVKSRP--FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
Y+ L+ + AL+V ++ K G PDIV+ SLLN + + A + M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
+P+ +++ LI + +EAV + M G +P++V+ ++ G C R
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN--GLCKRG- 235
Query: 495 NID---AVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYT 551
+ID ++L E I+ V YN+ I + N A+ L+ M + + P+ VTY
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 552 VLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMS 611
LI C R+S+A L +M++ KI +S++I A+ K+G + EAE +++ M
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 612 GCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKV 671
PD+ TY+++++ + + ++A +F M + + P+ + + L++ F K + +
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 672 LLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHL 731
+ + M ++ + + + ++ R+ + KQM + I + LL
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 732 LGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
L +G++E+ + +F + S E + TY+I+++ + AG ++ + G++P+
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 792 YGMFRDIVSFAQTRGGAEYA-AIIQERIE 819
+ ++S +G E A A+ +E E
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKE 564
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 204/441 (46%), Gaps = 12/441 (2%)
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449
+A+++F ++ K+ P IV ++ LL+A + + + M+ + NL +YS LI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 450 DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC-GRKVNIDAVLLAAEMRDI 508
+ + L+ A+ V +M + G EP+IV++ +LL G C G +++ DAV L +M ++
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN--GFCHGNRIS-DAVSLVGQMVEM 180
Query: 509 --KLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEA 566
+ ++ +N+ I +A+AL M + PD VTY ++++ C+ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 567 LGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA 626
L L +M KI +Y+++I A + +A ++F M G P+V+TY +++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 627 YNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDI--- 683
W A L +M I P+ + SAL+ AF K G+ + + + M ++ I
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 684 TFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMK 743
F+ S L + K +L+ + +VV+ N L+ K+ R++ M+
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT---YNTLIKGFCKAKRVDEGME 417
Query: 744 LFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQ 803
LF ++ G N TY+ L+ A V + M G+ P + ++
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 804 TRGGAEYAAIIQERIESLRMK 824
G E A ++ E ++ +M+
Sbjct: 478 NNGKVETALVVFEYLQRSKME 498
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 138/308 (44%), Gaps = 7/308 (2%)
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
+N + + A+ L+ M K + P V ++ L+S+ +++++ + ++M +L I
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
YS +I+ + ++ ++ A ++ M G PD++T ++L+ + A +L +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 643 METNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLR- 701
M +PDS + L+ + + S+ + + + M + D + + +V+ R
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ-PDLVTYGIVVNGLCKRG 235
Query: 702 DWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYS 761
D + L+K+ME + + N ++ L + + LF ++ + G N TY+
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 762 ILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV-SFAQTRGGAEYAAIIQERIES 820
L++ L G W +L M + I P+ F ++ +F + E + E I+
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK- 354
Query: 821 LRMKSGDP 828
+S DP
Sbjct: 355 ---RSIDP 359
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
LIK + ++ ++F M +Q+ Y +I + + D A+ +F +M
Sbjct: 402 LIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
PD TY+ L+ G+ A+ +F+ + R+ + P TYN +I G +
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
+ ++ GV P++VT+ ++S + +A + F MK PD+ T+N +I
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 310 LVKLGQYDKAIDLFHSMREKR 330
++ G + +L MR R
Sbjct: 581 HLRDGDKAASAELIREMRSCR 601
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIY--NMMIRLHARHNQIDKARGLFF 184
+ L+ + G + + VF +++ K DIY N+MI + +++ LF
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSK---MEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 185 EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
+ KP+ TY ++S R G A +F +M P TYN LI A G
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNG 278
+ + ++ ++M D T +V + +G
Sbjct: 586 DKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 157/595 (26%), Positives = 275/595 (46%), Gaps = 11/595 (1%)
Query: 145 QVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISA 204
++FN MK+ + Y + IYN++I + +++ A LF EM R P TYN LI
Sbjct: 200 ELFNRMKHDRIYPSVF-IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 205 HGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPD 264
+ +AG + + + M + PS T+N L+ G +A V K+M + G PD
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 265 LVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFH 324
T +I+ Y + + AL +E + ++ + T +I++ L K G+ +KA ++
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 325 SMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYAS 384
RE +P+ V + ++I Y G + + M +G+KP+ ++YN L+ +
Sbjct: 379 --REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 385 HGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVS 444
G + A N++K G+ P + +Y L+ YGR + K ++ M N PN+VS
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 445 YSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAE 504
Y LI+ L EA V R+ME G+ P + L+ C C + DA + E
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC--CSKGKIEDAFRFSKE 554
Query: 505 M--RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSR 562
M + I+LN V YN+ I G+ +A L + ++ + PD TY LIS
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 563 YSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTA 622
+ +EM I T + Y +IS +K+G I E +F M + PD++ Y
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSL---KPDLLVYNG 670
Query: 623 MLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQD 682
+LH Y D EKA L +M +I D ++L+ K G+ +V + + M ++
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730
Query: 683 ITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGR 737
+ + +V ++D+ + ++M+ ++ + + N+L+ L + R
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 162/718 (22%), Positives = 305/718 (42%), Gaps = 59/718 (8%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y ++ L I +A LFF ++ P +++ L+ + Q+R +N+F ++L
Sbjct: 112 YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ PS+ Y I A + + L++ +M + + P + +N+++ G + +
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A F+ M + P T+N +I K G +K+ + M+ E P ++TF +
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE--PSLITFNT 289
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
++ G +E+ + V M G P+ +++ L Y+S+ ++ AL V+ +G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ + + + LLNA + + KA E+ L PN V Y+ +ID Y G L A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
ME+ G++P+ ++ L+ G N + + +++ + + YN IG Y
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVT--------------------------------- 549
E++K + K M+ MP+ V+
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 550 --YTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNM 607
Y +LI CC + +A F EM+ I L Y+++I S G ++EAE +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 608 MKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQ 667
+ G PDV TY +++ Y A + ++ AL+ EM+ + I+P L+ K G
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 668 PSKVLLVAEFMREQDITFSDSIFFEMVLACSLLR-DWKTTIDLIKQMEPSFHVVSIGL-- 724
L E + D+ + + VL C + D + +L KQM SIGL
Sbjct: 650 ELTERLFGEMSLKPDL-----LVYNGVLHCYAVHGDMEKAFNLQKQMIEK----SIGLDK 700
Query: 725 --LNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQW 782
N L+ K G++ + L ++ + E +TY+I++K + Y+ W
Sbjct: 701 TTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK---GHCEVKDYMSAYVW 757
Query: 783 ---MEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMKSGDPSFDQQSTSS 837
M++ G + ++VS + ++ A I+ + RM GD + D+ +++
Sbjct: 758 YREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG-RM-LGDVTVDEDLSAT 813
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 200/518 (38%), Gaps = 82/518 (15%)
Query: 374 SYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMM 433
SY L M EA +F ++ G+ P S T LL+ +++Q VF +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 434 RINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC-GR 492
++ +P+ Y I A + + +E+F M+ D I P++ L+ G C G+
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID--GLCKGK 228
Query: 493 KVNIDAVLLAAEM--RDIKLNTVAYNSAIGSYMNVGEYEKAI------------------ 532
++N DA L EM R + + + YN+ I Y G EK+
Sbjct: 229 RMN-DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 533 -----ALYKC------------MKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMD 575
L+K MK +PD+ T+++L + ALG + +D
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 576 LKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEK 635
+ + S +++A K+G I +AE + G P+ + Y M+ Y D
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 636 ACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVL 695
A ME ++PD +A + L+R F + G+ M+ + ++ S + ++
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 696 ACSLLRDWKTTIDLIKQMEPSF---HVVSIGLL--------------------------- 725
++ D++K+ME + +VVS G L
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 726 -----NQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVL 780
N L+ G+IE + +++ G E N TY+ L+ L G + ++L
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 781 QWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERI 818
+ G++P D+ ++ G +A +Q I
Sbjct: 588 LEISRKGLKP------DVFTYNSLISGYGFAGNVQRCI 619
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 125 KNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFF 184
K + LI T+ G I + ++F M + + +YN ++ +A H ++KA L
Sbjct: 635 KTYHLLISLCTKEG-IELTERLFGEMSLKPDLL----VYNGVLHCYAVHGDMEKAFNLQK 689
Query: 185 EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
+M + D TYN+LI + G+ ++ D+M + P TYN ++
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVK 749
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYK 276
++ A ++M E G D+ N ++S K
Sbjct: 750 DYMSAYVWYREMQEKGFLLDVCIGNELVSGLK 781
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 7/248 (2%)
Query: 577 KIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDV---ITYTAMLHAYNTAEDW 633
+I V SS++ + S A + +F+ +S SP + +Y + N ++
Sbjct: 70 RIETARGVLSSLLRSDSTP--FASPKELFSAFSLS--SPSLKHDFSYLLLSVLLNESKMI 125
Query: 634 EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEM 693
+A LF + I P S + + L+ K Q + V + E D S ++ +
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 694 VLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGA 753
+ A L D ++L +M+ S+ + N L+ L K R+ +LF ++++
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 754 EANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAI 813
+ TY+ L+ AGN K +V + M+ I+PS F ++ G E A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 814 IQERIESL 821
+ + ++ L
Sbjct: 306 VLKEMKDL 313
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 234/490 (47%), Gaps = 2/490 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN+MI R +Q+ A + +M K P T N+L++ + A+ + D M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
P T+ L++ EA+ + ++M G PDLVT+ V++ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
AL+ M+ I D ++ VI L K D A++LF M K PD+ T++S
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR--PDVFTYSS 280
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I G+ + + + ML + PN+V++N+L+ A+A G EA +F+E+ +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ P+IV+Y SL+N + + +A+++F +M + P++V+Y+ LI+ + + + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
E+FR+M + G+ N V+ TL+ + N V + N + YN+ +
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
G+ EKA+ +++ ++K K+ PD TY ++ C+ + + + +
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
Y+++IS + K+GL EA ++F MK G PD TY ++ A+ D + L E
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 643 METNNIEPDS 652
M + D+
Sbjct: 581 MRSCRFAGDA 590
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/585 (25%), Positives = 280/585 (47%), Gaps = 20/585 (3%)
Query: 173 HNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRST 232
H ++D+A LF EM K R P ++ L+SA + ++ ++ + M V+ + T
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 233 YNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMK 292
YN +IN AL + KM + G GP +VT N +L+ + +G + S+A++ + M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 293 GTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQ 352
+PDT T +++ L + + +A+ L M K C PD+VT+ ++I+ G+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK--GCQPDLVTYGAVINGLCKRGE 220
Query: 353 IENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTS 412
+ + N M ++ ++V Y+ ++ + + +AL++F E+ G+ PD+ +Y+S
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 413 LLNA---YGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREME 469
L++ YGR A + + M + PN+V++++LIDA+ G L EA ++F EM
Sbjct: 281 LISCLCNYGRWSD---ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 470 QDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYE 529
Q I+PNIV+ +L+ R + +D + V YN+ I + +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 530 KAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVI 589
+ L++ M +R ++ ++VTYT LI + S A +M+ + Y++++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 590 SAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIE 649
K G + +A +F ++ S PD+ TY M A E LF + ++
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 650 PDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLR-DWKTTID 708
PD IA + ++ F K G + + M+E D DS + ++ L D + +
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKE-DGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 709 LIKQMEP---SFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVS 750
LIK+M + + GL+ +LH GR++ K F +++S
Sbjct: 577 LIKEMRSCRFAGDASTYGLVTDMLH----DGRLD---KGFLEVLS 614
Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 264/560 (47%), Gaps = 15/560 (2%)
Query: 248 EALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVI 307
EA+ + +M ++ P +V + +LSA ++ +S+ E M+ + + T+NI+I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 308 YCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEG 367
CL + Q A+ + M + P IVT S+++ + +I + + M+ G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYG--PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 368 LKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAR 427
+P+ V++ L+ H + EA+++ + G PD+V+Y +++N + +P A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 428 EVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAAC 487
+ N M ++ ++V YS +ID+ + +A+ +F EM+ GI P++ + +L++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 488 GRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDS 547
GR + +L R I N V +NS I ++ G+ +A L+ M +R + P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 548 VTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNM 607
VTY LI+ C R EA M+ Y+++I+ + K + + +F
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 608 MKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQ 667
M G + +TYT ++H + A D + A +F +M ++ + P+ + + L+ K G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 668 PSKVLLVAEFMR----EQDITFSDSIFFEMVLACSLLRDWKTTIDL-IKQMEPSFHVVSI 722
K ++V E+++ E DI + + M A + W L +K ++P V++
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD--VIA- 522
Query: 723 GLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQW 782
N ++ K G E LF K+ G + TY+ L++ L G+ E+++
Sbjct: 523 --YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 783 MED---AGIQPSYGMFRDIV 799
M AG +YG+ D++
Sbjct: 581 MRSCRFAGDASTYGLVTDML 600
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 197/381 (51%), Gaps = 5/381 (1%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
+I + +RG + + + N M+ K A IY+ +I ++ +D A LF EM
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIE-ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
+PD TY++LIS G+W A + DML + P+ T+N+LI+A G EA
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
K+ +M + + P++VT+N +++ + + +A F LM + PD T+N +I
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 310 LVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLK 369
K + ++LF M R + + VT+T++IH + +N + VF M+++G+
Sbjct: 390 FCKAKKVVDGMELFRDM--SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREV 429
PNI++YN L+ +G ++A+ VF ++K+ + PDI +Y + ++ + ++
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 430 FNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGR 489
F + + +KP++++Y+ +I + GL EA +F +M++DG P+ + TL+ A R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 490 CGRKVNIDAVLLAAEMRDIKL 510
G K + L EMR +
Sbjct: 568 DGDKAA--SAELIKEMRSCRF 586
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 236/516 (45%), Gaps = 11/516 (2%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
+ D+A+DLF M + R P IV F+ ++ + + + M G+ N+ +
Sbjct: 45 KLDEAVDLFGEMVKSRP--FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
YN ++ AL++ ++ K G P IV+ SLLN + + +A + + M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
+P+ V+++ L+ + +EAV + M G +P++V+ ++ G C R
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN--GLCKRGE 220
Query: 495 NIDAVLLAAEMRD--IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTV 552
A+ L +M I+ + V Y++ I S + A+ L+ M + + PD TY+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 553 LISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSG 612
LIS C R+S+A L +M++ KI ++S+I A++K+G + EAE +F+ M
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 613 CSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVL 672
P+++TY ++++ + + ++A +F M + + PD + + L+ F K + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 673 LVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLL 732
+ M + + + + ++ D + KQM +I N LL L
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 733 GKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSY 792
K+G++E M +F + S E + TY+I+ + + AG ++ + G++P
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 793 GMFRDIVSFAQTRGGAEYAAIIQERIESLRMKSGDP 828
+ ++S +G E A + ++MK P
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTL-----FIKMKEDGP 551
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 215/462 (46%), Gaps = 25/462 (5%)
Query: 373 VSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNM 432
+S NAL+ H EA+ +F E+ K+ P IV ++ LL+A + ++
Sbjct: 36 LSRNALL-----HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEK 90
Query: 433 MRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC-G 491
M I + NL +Y+ +I+ L+ A+ + +M + G P+IV++ +LL G C G
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN--GFCHG 148
Query: 492 RKVNIDAVLLAAEMRDI--KLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVT 549
+++ +AV L +M ++ + +TV + + + + +A+AL + M + PD VT
Sbjct: 149 NRIS-EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 550 YTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMK 609
Y +I+ C+ AL L++M KI +YS+VI + K + +A ++F M
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 610 MSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPS 669
G PDV TY++++ W A L +M I P+ + ++L+ AF K G+
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK-- 325
Query: 670 KVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVV-------SI 722
L+ AE + ++ I SI +V SL+ + D + + + F ++ +
Sbjct: 326 --LIEAEKLFDEMI--QRSIDPNIVTYNSLINGF-CMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 723 GLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQW 782
N L++ K+ ++ M+LF + G N TY+ L+ A + V +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 783 MEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMK 824
M G+ P+ + ++ G E A ++ E ++ +M+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 6/321 (1%)
Query: 93 WSVSEVVERVLELKHYEDVEGVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNW 149
++ S ++ + + D +L+ + R N F LI + G + + ++F+
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 150 MKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAG 209
M Q++ YN +I H+++D+A+ +F M C PD TYN LI+ +A
Sbjct: 336 MI-QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 210 QWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHN 269
+ M +F DM R + + TY LI+ + A V K+M +GV P+++T+N
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 270 IVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREK 329
+L + KA+ FE ++ + + PD T+NI+ + K G+ + DLF S+ K
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 330 RSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389
+ PD++ + ++I + G E +F M +G P+ +YN L+ A+ G
Sbjct: 515 GVK--PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 390 EALSVFNEIKKNGLCPDIVSY 410
+ + E++ D +Y
Sbjct: 573 ASAELIKEMRSCRFAGDASTY 593
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN ++ ++ +++KA +F +QK + +PD TYN + +AG+ ++F +
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
V P YN +I+ G EA + KM E+G PD T+N ++ A+ +
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 283 KALSYFELMKGTNIRPDTTTHNIV 306
+ + M+ D +T+ +V
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLV 596
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 5/151 (3%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIY--NMMIRLHARHNQIDKARGLFFEMQ 187
L+ + + G + + VF +++ K DIY N+M + +++ LF +
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSK---MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 188 KWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWR 247
KPD YN +IS + G A +F M P TYN LI A G+
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 248 EALKVCKKMTENGVGPDLVTHNIVLSAYKNG 278
+ ++ K+M D T+ +V +G
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 239/518 (46%), Gaps = 40/518 (7%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN++I R +QI A L +M K +P T ++L++ + + A+ + D M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
P T+ LI+ EA+ + +M + G P+LVT+ +V++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
AL+ M+ I D N +I L K D A++LF M K P++VT++S
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR--PNVVTYSS 300
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I G+ + + + M+ + + PN+V++NAL+ A+ G EA +++++ K
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PDI +Y SL+N + + KA+++F M + P++V+Y+ LI + + + +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
E+FREM G+ +TV Y + I
Sbjct: 421 ELFREMSHRGLVG-----------------------------------DTVTYTTLIQGL 445
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
+ G+ + A ++K M V PD +TY++L+ C + +AL D M +I L
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
+Y+++I K G + + +F + + G P+V+TY M+ + ++A AL +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 643 METNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMRE 680
M+ + P+S + L+RA + G + AE +RE
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAA---SAELIRE 600
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 214/415 (51%), Gaps = 10/415 (2%)
Query: 114 VLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLH 170
+++R V R + N + ++ + +RG + + + N M+ K A I+N +I
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSL 270
Query: 171 ARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSR 230
++ +D A LF EM+ +P+ TY++LIS G+W A + DM+ + P+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 231 STYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFEL 290
T+N LI+A G + EA K+ M + + PD+ T+N +++ + + KA FE
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 291 MKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVN 350
M + PD T+N +I K + + +LF M + + D VT+T++I +
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR--GLVGDTVTYTTLIQGLFHD 448
Query: 351 GQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSY 410
G +N + VF M+++G+ P+I++Y+ L+ ++G ++AL VF+ ++K+ + DI Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 411 TSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQ 470
T+++ ++ + ++F + + +KPN+V+Y+ +I S LL EA + ++M++
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNV 525
DG PN + TL+ A R G K + L EMR + V S IG N+
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAA--SAELIREMRSCRF--VGDASTIGLVANM 619
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 141/656 (21%), Positives = 273/656 (41%), Gaps = 110/656 (16%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y ++R ++D A GLF M K R P +N L+SA + ++ +++ + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
R + TYN LIN AL + KM + G P +VT + +L+ Y +G + S
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A++ + M RPDT +TFT+
Sbjct: 173 DAVALVDQMVEMGYRPDT-------------------------------------ITFTT 195
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+IH ++ + + + M+ G +PN+V+Y ++ G + AL++ N+++
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ D+V + +++++ + + A +F M ++PN+V+YS+LI S G ++A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
++ +M + I PN+V+ +N+ I ++
Sbjct: 316 QLLSDMIEKKINPNLVT-----------------------------------FNALIDAF 340
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
+ G++ +A LY M KR + PD TY L++ C R +A + M+
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
Y+++I + K + + +F M G D +TYT ++ D + A +F +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 643 METNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRD 702
M ++ + PD + S L+ G+ K L V ++M++ +I I+ M+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG------ 514
Query: 703 WKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSI 762
+ K+G+++ LF + G + N TY+
Sbjct: 515 -----------------------------MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 763 LLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGG--AEYAAIIQE 816
++ L + ++ +L+ M++ G P+ G + ++ A R G A A +I+E
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR-AHLRDGDKAASAELIRE 600
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 251/540 (46%), Gaps = 8/540 (1%)
Query: 146 VFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAH 205
VF + N+ + ++ N+++ R N+ K F + K PD + I+A
Sbjct: 226 VFPVLANKGMFPSKTTC-NILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAF 283
Query: 206 GRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDL 265
+ G+ A+ +F M A VAP+ T+N +I+ G G + EA +KM E G+ P L
Sbjct: 284 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 343
Query: 266 VTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHS 325
+T++I++ + A + M P+ +N +I ++ G +KAI++
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 403
Query: 326 MREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASH 385
M K T+ ++I Y NGQ +N + + ML+ G N S+ +++ SH
Sbjct: 404 MVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461
Query: 386 GMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSY 445
M AL E+ + P T+L++ + + KA E++ + +
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 446 SALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM 505
+AL+ G L EA + +E+ G + VS TL++ C CG+K +A + EM
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC--CGKKKLDEAFMFLDEM 579
Query: 506 --RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRY 563
R +K + Y+ I N+ + E+AI + K+ ++PD TY+V+I CC+ R
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Query: 564 SEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAM 623
E F DEMM + VY+ +I AY + G ++ A + MK G SP+ TYT++
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 624 LHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDI 683
+ + E+A LF EM +EP+ +AL+ + K GQ KV + M +++
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 759
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 217/474 (45%), Gaps = 37/474 (7%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y+++++ R +I A + EM K P+ YN LI + AG A+ I D M+
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
++ + STYN LI G A ++ K+M G + + V+ + +
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDL-------------------F 323
AL + M N+ P +I L K G++ KA++L
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 324 HSMRE--KRSE------------CLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLK 369
H + E K E C+ D V++ ++I +++ + M+ GLK
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREV 429
P+ +Y+ L+ + +EA+ +++ K+NG+ PD+ +Y+ +++ ++++ + +E
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 430 FNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGR 489
F+ M N++PN V Y+ LI AY +G L+ A+E+ +M+ GI PN + +L+
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 705
Query: 490 CGRKVNIDAVLLAAEMR--DIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDS 547
R +A LL EMR ++ N Y + I Y +G+ K L + M + V P+
Sbjct: 706 ISRVE--EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 763
Query: 548 VTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEA 601
+TYTV+I R +EA L+EM + I + Y I Y KQG + EA
Sbjct: 764 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 134/618 (21%), Positives = 257/618 (41%), Gaps = 95/618 (15%)
Query: 284 ALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSI 343
AL F ++ + P TT NI++ LV+ ++ K + F + + S PD+ FT+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS---PDVYLFTTA 279
Query: 344 IHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGL 403
I+ + G++E +F+ M G+ PN+V++N ++ G EA ++ + G+
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 404 CPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVE 463
P +++Y+ L+ R+++ A V M PN++ Y+ LID++ G L +A+E
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 464 VFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYM 523
+ M G+ + TL+ + G+ N + +L +N ++ S I
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 524 NVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEAL---------------- 567
+ ++ A+ M R + P T LIS C+ ++S+AL
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519
Query: 568 ------------GFLDEMMDLKIPLTNQ-------VYSSVISAYSKQGLIAEAESMFNMM 608
G LDE ++ + + Y+++IS + + EA + M
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 579
Query: 609 KMSGCSPD-----------------------------------VITYTAMLHAYNTAEDW 633
G PD V TY+ M+ AE
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Query: 634 EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEM 693
E+ F EM + N++P+++ + L+RA+ + G+ S L + E M+ + I+ + + + +
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 694 VLACSLLRDWKTTIDLIKQM-----EPS-FHVVSIGLLNQLLHLLGKSGRIESMMKLFFK 747
+ S++ + L ++M EP+ FH + L+ GK G++ + L +
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA------LIDGYGKLGQMVKVECLLRE 753
Query: 748 IVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGG 807
+ S N TY++++ GN + +L M + GI P +++ + +GG
Sbjct: 754 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 813
Query: 808 A----------EYAAIIQ 815
YAAII+
Sbjct: 814 VLEAFKGSDEENYAAIIE 831
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 83/219 (37%), Gaps = 35/219 (15%)
Query: 612 GCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKV 671
G SPDV +T ++A+ E+A LF +ME + P+ + + ++ G+ +
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 672 LLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHL 731
+ E M E + MEP+ SI L+
Sbjct: 328 FMFKEKMVE------------------------------RGMEPTLITYSI-----LVKG 352
Query: 732 LGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
L ++ RI + ++ G N Y+ L+ + + AG+ K IE+ M G+ +
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 792 YGMFRDIVSFAQTRGGAEYAAIIQERIESLRMKSGDPSF 830
+ ++ G A+ A + + + S+ SF
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 200 bits (508), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 256/520 (49%), Gaps = 9/520 (1%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
+N ++ A+ N+ D L MQ R D +YN LI+ R Q A+ + M+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ P T ++L+N EA+ + +M P+ VT N ++ + S
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+A++ + M +PD T+ V+ L K G D A+ L M + + E D+V +T+
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE--ADVVIYTT 260
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
II + + +F M +G++PN+V+YN+L+ ++G +A + +++ +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ P++V++++L++A+ + + V+A ++++ M ++ P++ +YS+LI+ + + L EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIG 520
+F M PN+V+ TL+ G C K + + L EM R + NTV YN+ I
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIK--GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
G+ + A ++K M V PD +TY++L+ C+ + +AL + + K+
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 581 TNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALF 640
Y+ +I K G + + +F + + G P+VI YT M+ + E+A ALF
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 641 LEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMRE 680
EM+ + P+S + L+RA + G + AE ++E
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAA---SAELIKE 595
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 220/493 (44%), Gaps = 37/493 (7%)
Query: 175 QIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYN 234
++D A LF EM + R P +N L+SA + ++ +++ + M ++ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 235 NLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT 294
LIN AL V KM + G PD+VT + +L+ Y +G + S+A++ + M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 295 NIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIE 354
+P+T VTF ++IH ++ +
Sbjct: 180 EYQPNT-------------------------------------VTFNTLIHGLFLHNKAS 202
Query: 355 NCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLL 414
+ + M+A G +P++ +Y ++ G ALS+ +++K + D+V YT+++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 415 NAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIE 474
+A + A +F M ++PN+V+Y++LI + G ++A + +M + I
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 475 PNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIAL 534
PN+V+ L+ A + G+ V + + R I + Y+S I + ++A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 535 YKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSK 594
++ M + P+ VTY LI C+ R E + EM + Y+++I +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 595 QGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIA 654
G A+ +F M G PD+ITY+ +L EKA +F ++ + +EPD
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 655 CSALMRAFNKGGQ 667
+ ++ K G+
Sbjct: 503 YNIMIEGMCKAGK 515
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 202/397 (50%), Gaps = 8/397 (2%)
Query: 113 GVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRL 169
+++R V R + + + ++ + +RG I+ + + M+ K A IY +I
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYTTIIDA 264
Query: 170 HARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPS 229
+ ++ A LF EM +P+ TYN+LI G+W A + DM+ + P+
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 230 RSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFE 289
T++ LI+A G EA K+ +M + + PD+ T++ +++ + + +A FE
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 290 LMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSV 349
LM + P+ T+N +I K + ++ ++LF M ++ + + VT+ ++I
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR--GLVGNTVTYNTLIQGLFQ 442
Query: 350 NGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVS 409
G + + +F M+++G+ P+I++Y+ L+ +G ++AL VF ++K+ + PDI +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 410 YTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREME 469
Y ++ ++ + ++F + + +KPN++ Y+ +I + GL EA +FREM+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 470 QDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMR 506
+DG PN + TL+ A R G K + L EMR
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAA--SAELIKEMR 597
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 223/479 (46%), Gaps = 43/479 (8%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
+ D A+DLF M + R LP IV F ++ + + + + M + ++ S
Sbjct: 60 KLDDAVDLFGEMVQSRP--LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
YN L+ + AL+V ++ K G PDIV+ +SLLN Y ++ +A + + M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
+ +PN V+++ LI + +EAV + M G +P++ + T++ G C R
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN--GLCKRG- 234
Query: 495 NID---AVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYT 551
+ID ++L E I+ + V Y + I + N A+ L+ M + + P+ VTY
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 552 VLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMS 611
LI C R+S+A L +M++ KI +S++I A+ K+G + EAE +++ M
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 612 GCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKV 671
PD+ TY+++++ + + ++A +F M + + P+ + + L++ F K +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR---- 410
Query: 672 LLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHL 731
V E M +L ++M V + N L+
Sbjct: 411 --VEEGM-----------------------------ELFREMSQRGLVGNTVTYNTLIQG 439
Query: 732 LGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQP 790
L ++G + K+F K+VS G + TYSILL L G K + V ++++ + ++P
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 143/291 (49%), Gaps = 7/291 (2%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDI--YNMMIRLHARHNQIDKARGLFF 184
F LI + G + + ++++ M + DI Y+ +I H+++D+A+ +F
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 185 EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
M C P+ TYN LI +A + M +F +M + + + TYN LI G
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHN 304
+ A K+ KKM +GV PD++T++I+L + KAL FE ++ + + PD T+N
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 305 IVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTML 364
I+I + K G+ + DLF S+ K + P+++ +T++I + G E +F M
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVK--PNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLN 415
+G PN +YN L+ A G + + E++ G D + + ++N
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 207/447 (46%), Gaps = 24/447 (5%)
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMM-----RINNLKP--NL 442
+A+ +F E+ ++ P IV + LL+A + + F+++ R+ NL+ +L
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK-------FDLVISLGERMQNLRISYDL 115
Query: 443 VSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLA 502
SY+ LI+ + L A+ V +M + G EP+IV++ +LL G C K +AV L
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN--GYCHGKRISEAVALV 173
Query: 503 AEM--RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRL 560
+M + + NTV +N+ I + +A+AL M R PD TY +++ C+
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 561 SRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITY 620
AL L +M KI +Y+++I A + +A ++F M G P+V+TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 621 TAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMRE 680
+++ W A L +M I P+ + SAL+ AF K G+ + + + M +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 681 QDI---TFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGR 737
+ I F+ S L + K +L+ + +VV+ N L+ K+ R
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT---YNTLIKGFCKAKR 410
Query: 738 IESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRD 797
+E M+LF ++ G N TY+ L++ L AG+ ++ + M G+ P +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 798 IVSFAQTRGGAEYAAIIQERIESLRMK 824
++ G E A ++ E ++ +M+
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKME 497
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/610 (22%), Positives = 298/610 (48%), Gaps = 16/610 (2%)
Query: 78 RRHRLAVEGNRFQKDWSVSEVVERVLELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQR 137
R+HR + + E++ + + ++ +++ +L+ + R + + F++ +++
Sbjct: 75 RKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDR--QLSIRFMVSLLSRE 132
Query: 138 GAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAET 197
S + +W+ + Y YN+++R R Q D A GLF EM++ PD T
Sbjct: 133 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYT 192
Query: 198 YNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMT 257
Y+ LI++ G+ G + A++ M + V+ Y+NLI ++ +A+ + ++
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 258 ENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYD 317
+G+ PDLV +N +++ Y + +A + M + P+T +++ ++ V+ ++
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 318 KAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNA 377
+A+ +F M+E C D+ T +I +Y ++ +F ++ ++PN+VSYN
Sbjct: 313 EALSVFAEMKE--VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 378 LMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINN 437
++ Y + EA+ +F +++ + ++V+Y +++ YG++ + KA + M+
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 438 LKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNID 497
++PN ++YS +I +G G L A +F+++ G+E + V T++ A R G +
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 498 AVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSC 557
+L ++ D + +AI G E+A +++ + + D + +I+
Sbjct: 491 RLLHELKLPD----NIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLY 546
Query: 558 CRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCS-PD 616
R RY + ++M + V + V++AY KQ +A++++ M+ GC PD
Sbjct: 547 SRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPD 606
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETN---NIEPDSIACSALMRAFNKGGQPSKVLL 673
+ + ML Y++ +D+E +LF +E++ N + + +AL +K S+V+
Sbjct: 607 EVHF-QMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVM- 664
Query: 674 VAEFMREQDI 683
MRE+ I
Sbjct: 665 --NRMRERGI 672
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 248/515 (48%), Gaps = 7/515 (1%)
Query: 201 LISAHGRAGQWRWAMNIFDDMLR-AAVAPSRSTYNNLINACGSTGNWREALKVCKKMTEN 259
++S R W+ ++ + D + A PS YN ++ + A + +M +
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 260 GVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKA 319
+ PD T++ +++++ + ALS+ + M+ + D ++ +I +L Y KA
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 320 IDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALM 379
I +F R KRS PD+V + S+I++Y + + M G+ PN VSY+ L+
Sbjct: 245 ISIFS--RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 380 AAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLK 439
+ Y + EALSVF E+K+ D+ + +++ YG+ +A +F +R +++
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIE 362
Query: 440 PNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAV 499
PN+VSY+ ++ YG L EA+ +FR M++ IE N+V+ T++ G+ +
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 500 LLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCR 559
+ + R I+ N + Y++ I + G+ ++A L++ ++ V D V Y +I + R
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Query: 560 LSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVIT 619
+ A L E LK+P N + I+ +K G EA +F SG D+
Sbjct: 483 VGLMGHAKRLLHE---LKLP-DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISV 538
Query: 620 YTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMR 679
+ M++ Y+ + + +F +M T PDS + ++ A+ K + K V M+
Sbjct: 539 FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQ 598
Query: 680 EQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQME 714
E+ F D + F+M+ S +D++ L +++E
Sbjct: 599 EEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 633
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 153/317 (48%), Gaps = 20/317 (6%)
Query: 514 AYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEM 573
AYN + + + +++ A L+ M++R + PD TY+ LI+S + + AL +L +M
Sbjct: 157 AYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM 216
Query: 574 MDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDW 633
++ +YS++I + ++A S+F+ +K SG +PD++ Y +M++ Y A+ +
Sbjct: 217 EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 634 EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEM 693
+A L EM + P++++ S L+ + + + + L V M+E +
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD------- 329
Query: 694 VLACSLLRDWKTTIDLIKQMEPSF----------HVVSIGLLNQLLHLLGKSGRIESMMK 743
+ C+++ D +D++K+ + F +VVS N +L + G++ +
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS---YNTILRVYGEAELFGEAIH 386
Query: 744 LFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQ 803
LF + E N TY+ ++K K ++Q M+ GI+P+ + I+S
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 804 TRGGAEYAAIIQERIES 820
G + AA + +++ S
Sbjct: 447 KAGKLDRAATLFQKLRS 463
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 157/364 (43%), Gaps = 43/364 (11%)
Query: 440 PNLVSYSALIDAYGSNGLLAEAVEV----FREMEQDGIEPNIVSICTLLAACGRCGRKVN 495
P++ +Y+ ++ N L A+ ++ F EM Q + P+ + TL+ + G+ G +
Sbjct: 153 PSVFAYNVVL----RNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208
Query: 496 IDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLIS 555
+ L E + + V Y++ I + +Y KAI+++ +K+ + PD V Y +I+
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 556 SCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSP 615
+ + EA + EM + + YS+++S Y + EA S+F MK C+
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 616 DVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVA 675
D+ T M+ Y + ++A LF + +IEP+ ++ + ++R + + + + +
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 676 EFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKS 735
M+ +DI ++ N ++ + GK+
Sbjct: 389 RLMQRKDIE-----------------------------------QNVVTYNTMIKIYGKT 413
Query: 736 GRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMF 795
E L ++ S G E N TYS ++ AG + + Q + +G++ ++
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 796 RDIV 799
+ ++
Sbjct: 474 QTMI 477
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 614 SPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLL 673
+P V Y +L A+ ++ A LF EM + PD S L+ +F K G L
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 674 VAEFMREQDITFSDSIFFEMVLACS-LLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLL 732
+ M EQD D + + ++ S L D+ I + +++ S + N ++++
Sbjct: 212 WLQKM-EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 733 GKSGRIESMMKLFFKIVSSGAEANFNTYSILL 764
GK+ L ++ +G N +YS LL
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/691 (23%), Positives = 302/691 (43%), Gaps = 58/691 (8%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
L+ + + G ++ QV+ M K C YN M+ + + +++A ++ +
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDK-VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
PD TY +LI + + A +F++M + Y +LI+ EA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
+ + KM ++ P + T+ +++ + + S+AL+ + M+ T I+P+ T+ ++I
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 310 LVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLK 369
L +++KA +L M EK +P+++T+ ++I+ Y G IE+ V M + L
Sbjct: 368 LCSQCKFEKARELLGQMLEKG--LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREV 429
PN +YN L+ Y + K A+ V N++ + + PD+V+Y SL++ RS A +
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 430 FNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGR 489
++M L P+ +Y+++ID+ + + EA ++F +EQ G+ PN+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV------------ 532
Query: 490 CGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVT 549
V Y + I Y G+ ++A + + M + +P+S+T
Sbjct: 533 -----------------------VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 550 YTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMK 609
+ LI C + EA ++M+ + + T + +I K G A S F M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 610 MSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPS 669
SG PD TYT + Y A + +M N + PD S+L++ + GQ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 670 KVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLL 729
V + MR+ S F ++ ++ K K EP +S N +
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ-----KGSEPELCAMS----NMM- 739
Query: 730 HLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWME-DAGI 788
+++++L K+V N +Y L+ + GN R +V M+ + GI
Sbjct: 740 -------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 789 QPSYGMFRDIVS-FAQTRGGAEYAAIIQERI 818
PS +F ++S + + E A ++ + I
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 148/573 (25%), Positives = 262/573 (45%), Gaps = 16/573 (2%)
Query: 236 LINACGSTGNWREALKVCKKMTEN---GVGPDLV--THNIVLSAYKNGAQYSKALSYFEL 290
+I +C S G+ L +C+KM ++ + L+ +N +L++ + +
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 291 MKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVN 350
M + P+ T+N ++ KLG ++A + E + PD T+TS+I Y
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLD--PDFFTYTSLIMGYCQR 266
Query: 351 GQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSY 410
+++ VFN M +G + N V+Y L+ EA+ +F ++K + P + +Y
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 411 TSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQ 470
T L+ + S++ +A + M +KPN+ +Y+ LID+ S +A E+ +M +
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKL--NTVAYNSAIGSYMNVGEY 528
G+ PN+++ L+ G C R + DAV + M KL NT YN I Y
Sbjct: 387 KGLMPNVITYNALIN--GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNV 443
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
KA+ + M +RKV+PD VTY LI CR + A L M D + Y+S+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I + K + EA +F+ ++ G +P+V+ YTA++ Y A ++A + +M + N
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLR--DWKTT 706
P+S+ +AL+ G+ + L+ E M + I ++ + +L LL+ D+
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVK--IGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 707 IDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKN 766
+QM S + + GR+ + K+ +G + TYS L+K
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 767 LLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV 799
G +VL+ M D G +PS F ++
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/594 (23%), Positives = 252/594 (42%), Gaps = 99/594 (16%)
Query: 125 KNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDI--YNMMIRLHARHNQIDKARGL 182
+ + LIK + ++ N +K + + +I Y ++I + +KAR L
Sbjct: 324 RTYTVLIKSLC---GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 183 FFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINA-CG 241
+M + P+ TYNALI+ + + G A+++ + M ++P+ TYN LI C
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 242 STGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTT 301
S N +A+ V KM E V PD+VT+N ++ + A LM + PD
Sbjct: 441 S--NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 302 THNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFN 361
T+ +I L K + ++A DLF S+ +K P++V +T++I Y G+++ +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVN--PNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 362 TMLAEGLKPNIVSYNALMAAYASHGMSKEA------------------------------ 391
ML++ PN +++NAL+ + G KEA
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 392 -----LSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYS 446
S F ++ +G PD +YT+ + Y R + + A ++ MR N + P+L +YS
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 447 ALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAAC--GRCGRK----------- 493
+LI YG G A +V + M G EP+ + +L+ + G++
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 494 --VNIDAVLLAAEM---RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRK-VMPDS 547
+ D V+ E + N +Y I VG A ++ M++ + + P
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 548 VTYTVLISSCCRLSRYSEALGFLDEMMDL-KIP-------LTNQVYSS------------ 587
+ + L+S CC+L +++EA +D+M+ + +P L +Y
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 588 ---------------VISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA 626
+I KQGL+ +FN+M+ +GC TY+ ++
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 165/402 (41%), Gaps = 25/402 (6%)
Query: 93 WSVSEVVERVLELKHYEDVEGVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNW 149
W+ + +++ + + K E+ + + + N + LI + G ++ ++ +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 150 MKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAG 209
M + KN + +N +I ++ +A L +M K +P T LI + G
Sbjct: 558 MLS-KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 210 QWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHN 269
+ A + F ML + P TY I G +A + KM ENGV PDL T++
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 270 IVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLG--------------- 314
++ Y + Q + A + M+ T P T +I L+++
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 315 ---QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLA-EGLKP 370
++D ++L M E P+ ++ +I G + + VF+ M EG+ P
Sbjct: 737 NMMEFDTVVELLEKMVEH--SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 371 NIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVF 430
+ + +NAL++ EA V +++ G P + S L+ + + + VF
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 431 NMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDG 472
+ + +++ +ID G GL+ E+F ME++G
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 165/373 (44%), Gaps = 20/373 (5%)
Query: 439 KPNLVSYSALIDAYGSNGLLAEAVEV----FREMEQDGIEPNIVSICTLLAACGRCGRKV 494
K ++ SY++L+ +NG + ++ + + G ++ +C RK+
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLC----------RKM 169
Query: 495 NIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLI 554
N D E++ KL YN+ + S G ++ +Y M + KV P+ TY ++
Sbjct: 170 NKDERF---ELK-YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 555 SSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCS 614
+ C+L EA ++ ++++ + Y+S+I Y ++ + A +FN M + GC
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285
Query: 615 PDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLV 674
+ + YT ++H A ++A LF++M+ + P + L+++ + S+ L +
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 675 AEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGK 734
+ M E I + + ++ + ++ +L+ QM + ++ N L++ K
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 735 SGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGM 794
G IE + + + S N TY+ L+K + N K + VL M + + P
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVT 464
Query: 795 FRDIVSFAQTRGG 807
+ ++ Q R G
Sbjct: 465 YNSLID-GQCRSG 476
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 236/518 (45%), Gaps = 40/518 (7%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN++I R +QI A L +M K +P T ++L++ + + A+ + D M+
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
P T+ LI+ EA+ + +M + G P+LVT+ +V++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A + M+ I D N +I L K D A++LF M K P++VT++S
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR--PNVVTYSS 225
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I G+ + + + M+ + + PN+V++NAL+ A+ G EA + +++ K
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PDI +Y SL+N + + KA+++F M + P+L +Y+ LI + + + +
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
E+FREM G+ +TV Y + I
Sbjct: 346 ELFREMSHRGLVG-----------------------------------DTVTYTTLIQGL 370
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
+ G+ + A ++K M V PD +TY++L+ C + +AL D M +I L
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
+Y+++I K G + + +F + + G P+V+TY M+ + ++A AL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 643 METNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMRE 680
M+ + PDS + L+RA + G + AE +RE
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAA---SAELIRE 525
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 215/416 (51%), Gaps = 10/416 (2%)
Query: 113 GVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRL 169
+++R V R + N + ++ + +RG I+ + + N M+ K A I+N +I
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ADVVIFNTIIDS 194
Query: 170 HARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPS 229
++ +D A LF EM+ +P+ TY++LIS G+W A + DM+ + P+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 230 RSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFE 289
T+N LI+A G + EA K+ M + + PD+ T+N +++ + + KA FE
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 290 LMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSV 349
M + PD T+N +I K + + +LF M + + D VT+T++I
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR--GLVGDTVTYTTLIQGLFH 372
Query: 350 NGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVS 409
+G +N + VF M+++G+ P+I++Y+ L+ ++G ++AL VF+ ++K+ + DI
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 410 YTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREME 469
YT+++ ++ + ++F + + +KPN+V+Y+ +I S LL EA + ++M+
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 470 QDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNV 525
+DG P+ + TL+ A R G K + L EMR + V S IG N+
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAA--SAELIREMRSCRF--VGDASTIGLVANM 544
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 250/556 (44%), Gaps = 40/556 (7%)
Query: 263 PDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDL 322
P + N +LSA ++ +S E M+ I + T+NI+I C + Q A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 323 FHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAY 382
M + E P IVT +S+++ Y +I + + + M+ G +P+ +++ L+
Sbjct: 68 LGKMMKLGYE--PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 383 ASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNL 442
H + EA+++ + + + G P++V+Y ++N + A + N M ++ ++
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 443 VSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLA 502
V ++ +ID+ + +A+ +F+EME GI PN+V+ +L++ GR + +L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 503 AEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSR 562
+ I N V +N+ I +++ G++ +A L+ M KR + PD TY LI+ C R
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 563 YSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTA 622
+A + M+ Y+++I + K + + +F M G D +TYT
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 623 MLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQD 682
++ D + A +F +M ++ + PD + S L+ G+ K L V ++M++ +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 683 ITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMM 742
I I+ M+ + K+G+++
Sbjct: 426 IKLDIYIYTTMIEG-----------------------------------MCKAGKVDDGW 450
Query: 743 KLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFA 802
LF + G + N TY+ ++ L + ++ +L+ M++ G P G + ++ A
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR-A 509
Query: 803 QTRGG--AEYAAIIQE 816
R G A A +I+E
Sbjct: 510 HLRDGDKAASAELIRE 525
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 231/490 (47%), Gaps = 2/490 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y++ I R +Q+ A + +M K +PD T ++L++ + + + A+ + D M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
P T+ LI+ EA+ + +M + G PDLVT+ V++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
ALS + M+ I D +N +I L K D A++LF M K PD+ T++S
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR--PDVFTYSS 298
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I G+ + + + M+ + PN+V+++AL+ A+ G EA +++E+ K
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PDI +Y+SL+N + + +A+ +F +M + PN+V+YS LI + + E +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
E+FREM Q G+ N V+ TL+ + N V + N + YN +
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
G+ KA+ +++ +++ + PD TY ++I C+ + + + +
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
Y+++IS + ++G EA+S+ MK G P+ TY ++ A D E + L E
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 643 METNNIEPDS 652
M + D+
Sbjct: 599 MRSCGFAGDA 608
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/573 (24%), Positives = 272/573 (47%), Gaps = 19/573 (3%)
Query: 175 QIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYN 234
++D A LF +M K R P +N L+SA + ++ +++ + M ++ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 235 NLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT 294
IN AL V KM + G PD+VT + +L+ Y + + S A++ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 295 NIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIE 354
+PDT T +I+ L + +A+ L M ++ C PD+VT+ ++++ G I+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDID 240
Query: 355 NCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLL 414
+ M ++ ++V YN ++ + +AL++F E+ G+ PD+ +Y+SL+
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 415 NA---YGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQD 471
+ YGR A + + M + PN+V++SALIDA+ G L EA +++ EM +
Sbjct: 301 SCLCNYGRWSD---ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 472 GIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIGSYMNVGEYE 529
I+P+I + +L+ G C +A + M +D N V Y++ I + E
Sbjct: 358 SIDPDIFTYSSLIN--GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 530 KAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVI 589
+ + L++ M +R ++ ++VTYT LI + A +M+ + + Y+ ++
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 590 SAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIE 649
K G +A+A +F ++ S PD+ TY M+ A E LF + +
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 650 PDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDL 709
P+ IA + ++ F + G + + + M+E + + ++ A D + + +L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 710 IKQMEP---SFHVVSIGLLNQLLHLLGKSGRIE 739
IK+M + +IGL+ +LH GR++
Sbjct: 596 IKEMRSCGFAGDASTIGLVTNMLH----DGRLD 624
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/616 (23%), Positives = 277/616 (44%), Gaps = 66/616 (10%)
Query: 232 TYNNLINACGS----------TGNWREALK--------------VCKKMTENGVGPDLVT 267
T + N CGS +G++RE L+ + M ++ P +V
Sbjct: 26 TVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE 85
Query: 268 HNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMR 327
N +LSA ++ +S E M+ I D T++I I C + Q A+ + M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 328 EKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGM 387
+ E PDIVT +S+++ Y + +I + + + M+ G KP+ ++ L+ H
Sbjct: 146 KLGYE--PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 388 SKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSA 447
+ EA+++ +++ + G PD+V+Y +++N + A + M ++ ++V Y+
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 448 LIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRD 507
+ID + +A+ +F EM+ GI P++ + +L++ GR + +L R
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 508 IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEAL 567
I N V +++ I +++ G+ +A LY M KR + PD TY+ LI+ C R EA
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 568 GFLDEMMDLKIPLTNQV-YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA 626
E+M K N V YS++I + K + E +F M G + +TYT ++H
Sbjct: 384 HMF-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 627 YNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFS 686
+ A D + A +F +M + + P+ + + L+ K G+ +K ++V E+++
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS----- 497
Query: 687 DSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFF 746
MEP + +I ++ + K+G++E +LF
Sbjct: 498 -------------------------TMEPDIYTYNI-----MIEGMCKAGKVEDGWELFC 527
Query: 747 KIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRG 806
+ G N Y+ ++ G+ + +L+ M++ G P+ G + ++ A+ R
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR-ARLRD 586
Query: 807 GAEYAAIIQERIESLR 822
G A+ E I+ +R
Sbjct: 587 GDREAS--AELIKEMR 600
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 251/517 (48%), Gaps = 7/517 (1%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
+N ++ A+ N+ + L +MQ D TY+ I+ R Q A+ + M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ P T ++L+N + +A+ + +M E G PD T ++ + S
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+A++ + M +PD T+ V+ L K G D A+ L M + + E D+V + +
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE--ADVVIYNT 263
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
II +++ +F M +G++P++ +Y++L++ ++G +A + +++ +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ P++V++++L++A+ + + V+A ++++ M ++ P++ +YS+LI+ + + L EA
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIG 520
+F M PN+V+ TL+ G C K + + L EM R + NTV Y + I
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIK--GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
+ + + A ++K M V P+ +TY +L+ C+ + ++A+ + + +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 581 TNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALF 640
Y+ +I K G + + +F + + G SP+VI Y M+ + E+A +L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 641 LEMETNNIEPDSIACSALMRA-FNKGGQPSKVLLVAE 676
+M+ + P+S + L+RA G + + L+ E
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 190/364 (52%), Gaps = 3/364 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
++ + +RG I+ + + M+ K A IYN +I ++ +D A LF EM
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
+PD TY++LIS G+W A + DM+ + P+ T++ LI+A G EA
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
K+ +M + + PD+ T++ +++ + + +A FELM + P+ T++ +I
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 310 LVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLK 369
K + ++ ++LF M ++ + + VT+T++IH + +N + VF M++ G+
Sbjct: 408 FCKAKRVEEGMELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREV 429
PNI++YN L+ +G +A+ VF ++++ + PDI +Y ++ ++ + E+
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 430 FNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGR 489
F + + + PN+++Y+ +I + G EA + ++M++DG PN + TL+ A R
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 490 CGRK 493
G +
Sbjct: 586 DGDR 589
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 1/198 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
LIK + + ++F M +Q+ Y +I + D A+ +F +M
Sbjct: 404 LIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
P+ TYN L+ + G+ AM +F+ + R+ + P TYN +I G +
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
++ ++ GV P+++ +N ++S + +A S + MK P++ T+N +I
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 310 LVKLGQYDKAIDLFHSMR 327
++ G + + +L MR
Sbjct: 583 RLRDGDREASAELIKEMR 600
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 196 bits (497), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 244/555 (43%), Gaps = 40/555 (7%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
+Y+ I + ++ ++KA+ LF M P A+ Y +LI + R R + +M
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
+ + S TY ++ S+G+ A + K+M +G P++V + ++ + +++
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
A+ + MK I PD +N +I L K + D+A M E + P+ T+
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK--PNAFTYG 526
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKN 401
+ I Y + + M G+ PN V L+ Y G EA S + +
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 402 GLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEA 461
G+ D +YT L+N ++ + A E+F MR + P++ SY LI+ + G + +A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGS 521
+F EM ++G+ PN++ LL R G +L ++ + N V Y + I
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 522 YMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDE--------- 572
Y G+ +A L+ MK + ++PDS YT L+ CCRL+ A+
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASST 766
Query: 573 --------------MMDLKIPLTNQV---------------YSSVISAYSKQGLIAEAES 603
+LK + N++ Y+ +I K+G + A+
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 604 MFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFN 663
+F+ M+ + P VITYT++L+ Y+ + +F E IEPD I S ++ AF
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886
Query: 664 KGGQPSKVLLVAEFM 678
K G +K L++ + M
Sbjct: 887 KEGMTTKALVLVDQM 901
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 155/680 (22%), Positives = 284/680 (41%), Gaps = 98/680 (14%)
Query: 172 RHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRW------------------ 213
R N++D ++ M + D +TY+ LI AH RAG +
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN 257
Query: 214 ---AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNI 270
A+ + + M+ + P + TY+ LI+ +A + +M GV D T+++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 271 VLSAYKNG--AQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSM-- 326
++ G A +K L + + G NI+P ++ I + K G +KA LF M
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 327 ------------------REKRS----ECLPDI---------VTFTSIIHLYSVNGQIEN 355
REK E L ++ T+ +++ +G ++
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 356 CKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLN 415
+ M+A G +PN+V Y L+ + + +A+ V E+K+ G+ PDI Y SL+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 416 AYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEP 475
++++ +AR M N LKPN +Y A I Y A A + +EM + G+ P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 476 NIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALY 535
N V +CT L I Y G+ +A + Y
Sbjct: 556 NKV-LCTGL----------------------------------INEYCKKGKVIEACSAY 580
Query: 536 KCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQ 595
+ M + ++ D+ TYTVL++ + + +A EM I Y +I+ +SK
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 596 GLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIAC 655
G + +A S+F+ M G +P+VI Y +L + + + EKA L EM + P+++
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 656 SALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEP 715
++ + K G ++ + + M+ + + ++ +V C L D + I + +
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Query: 716 SFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSG----AEANFNTYSILLKNLLAAG 771
S N L++ + K G+ E ++ +++ + N TY+I++ L G
Sbjct: 761 G-CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 772 NWRKYIEVLQWMEDAGIQPS 791
N E+ M++A + P+
Sbjct: 820 NLEAAKELFHQMQNANLMPT 839
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 204/511 (39%), Gaps = 89/511 (17%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQ----KNYCARNDIYNMMIRLHARHNQIDKARGLFFE 185
LIK Q + +V MK Q +C YN +I ++ ++D+AR E
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC-----YNSLIIGLSKAKRMDEARSFLVE 512
Query: 186 MQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGN 245
M + KP+A TY A IS + A ++ A +M V P++ LIN G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 246 WREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNI 305
EA + M + G+ D T+ ++++ + A F M+G I PD ++ +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 306 VIYCLVKLGQYDKAIDLFHSMRE------------------------KRSECL------- 334
+I KLG KA +F M E K E L
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 335 --PDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEAL 392
P+ VT+ +II Y +G + +F+ M +GL P+ Y L+ + A+
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 393 SVFNEIKK---------NGLC-----------------------------PDIVSYTSLL 414
++F KK N L P+ V+Y ++
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 415 NAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIE 474
+ + A+E+F+ M+ NL P +++Y++L++ Y G AE VF E GIE
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Query: 475 PNIVSICTLLAACGRCGRKVNIDAVLLAAEM-------RDIKLNTVAYNSAIGSYMNVGE 527
P+ + ++ A + G + A++L +M KL+ + + + VGE
Sbjct: 873 PDHIMYSVIINAFLKEG--MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 528 YEKAIALYKCMKKRKVMPDSVTYTVLISSCC 558
E A + + M + + +PDS T LI+ C
Sbjct: 931 MEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 137/628 (21%), Positives = 238/628 (37%), Gaps = 71/628 (11%)
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNI-RPDTTTH 303
NWR+ L E + P++V VL + K SK LS+F + + +
Sbjct: 46 NWRDTLVSSNLSIE--INPEVVLS--VLRS-KRVDDPSKLLSFFNWVDSQKVTEQKLDSF 100
Query: 304 NIVIYCLVKLGQYDKAIDLFHSMREKR---SECLPDIV--------------TFTSIIHL 346
+ + L G ++KA+ + M E+ +E IV F +
Sbjct: 101 SFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDG 160
Query: 347 YSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPD 406
Y G IE VF++ + L P + L+ A V+ + + + D
Sbjct: 161 YIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD 220
Query: 407 IVSYTSLLNAYGRSQQPVKAREV-------FNMMRIN--------------NLKPNLVSY 445
+ +Y L+ A+ R+ ++V F +N L P +Y
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTY 280
Query: 446 SALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVL-LAAE 504
LID L +A + EM+ G+ + + L+ + GR N DA L E
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GR--NADAAKGLVHE 337
Query: 505 M--RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSR 562
M I + Y+ I G EKA AL+ M ++P + Y LI CR
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 563 YSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTA 622
+ L EM I ++ Y +V+ G + A ++ M SGC P+V+ YT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 623 MLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQD 682
++ + + A + EM+ I PD ++L+ +K + + M E
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 683 I---TFSDSIFFEMVLACSLLRDWKTTIDLIKQME-----PSFHVVSIGLLNQLLHLLGK 734
+ F+ F + S ++ + +K+M P+ V+ GL+N+ K
Sbjct: 518 LKPNAFTYGAFISGYIEAS---EFASADKYVKEMRECGVLPN-KVLCTGLINEYC----K 569
Query: 735 SGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQP---S 791
G++ + +V G + TY++L+ L E+ + M GI P S
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 792 YGMFRDIVSFAQTRGGAEYAAIIQERIE 819
YG+ I F++ + ++I E +E
Sbjct: 630 YGVL--INGFSKLGNMQKASSIFDEMVE 655
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/613 (24%), Positives = 286/613 (46%), Gaps = 29/613 (4%)
Query: 193 PDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKV 252
P+ TYN LI R + A+ +F +M V P+ TY I+ G +G+ AL+
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 253 CKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVK 312
+KM G+ P++V N L + + +A F +K + PD+ T+N+++ C K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 313 LGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNI 372
+G+ D+AI L M E + C PD++ S+I+ +++ +F M LKP +
Sbjct: 516 VGEIDEAIKLLSEMME--NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 373 VSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKA-REVFN 431
V+YN L+A +G +EA+ +F + + G P+ +++ +L + ++ + A + +F
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 432 MMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCG 491
MM + + P++ +Y+ +I NG + EA+ F +M++ + P+ V++CTLL
Sbjct: 634 MMDMGCV-PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGV---- 687
Query: 492 RKVNIDAVLLAAEMRDIKLNTVAYNSA-----------IGSYMNVGEYEKAIALYKCMKK 540
+ A L+ + I YN A IGS + + A++ + +
Sbjct: 688 ----VKASLIEDAYKII--TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 541 RKVMPDSVTYTV-LISSCCRLSRYSEALGFLDEMM-DLKIPLTNQVYSSVISAYSKQGLI 598
+ D + V +I C+ + S A ++ DL + Y+ +I + +I
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 599 AEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSAL 658
A+ +F +K +GC PDV TY +L AY + ++ L+ EM T+ E ++I + +
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 659 MRAFNKGGQPSKVL-LVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSF 717
+ K G L L + M ++D + + + ++ S L + M
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 718 HVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYI 777
+ + N L++ GK+G ++ LF ++V G + TYS+L+ L G + +
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 778 EVLQWMEDAGIQP 790
+ ++++G+ P
Sbjct: 982 HYFKELKESGLNP 994
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/622 (23%), Positives = 278/622 (44%), Gaps = 27/622 (4%)
Query: 90 QKDWSVSEVVERVLE--------LKHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAIN 141
+ D S SE V R L+ +++ V G LN + ++++ + G +
Sbjct: 79 KPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLV---HTTETCNYMLEALRVDGKLE 135
Query: 142 HSNQVFNWMKNQKNYCARN-DIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNA 200
VF+ M QK R+ + Y + + + + +A +M+++ +A +YN
Sbjct: 136 EMAYVFDLM--QKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 201 LISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENG 260
LI ++ AM ++ M+ PS TY++L+ G + + + K+M G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 261 VGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAI 320
+ P++ T I + + ++A + M PD T+ ++I L + D A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 321 DLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMA 380
++F M+ R + PD VT+ +++ +S N +++ K ++ M +G P++V++ L+
Sbjct: 314 EVFEKMKTGRHK--PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 381 AYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKP 440
A G EA + ++ G+ P++ +Y +L+ R + A E+F M +KP
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 441 NLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVL 500
+Y ID YG +G A+E F +M+ GI PNIV+ L + + GR +
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 501 LAAEMRDIKL--NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCC 558
++DI L ++V YN + Y VGE ++AI L M + PD + LI++
Sbjct: 492 YG--LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 559 RLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVI 618
+ R EA M ++K+ T Y+++++ K G I EA +F M GC P+ I
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609
Query: 619 TYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFM 678
T+ + ++ A + +M PD + ++ K GQ + + M
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Query: 679 REQDITFSDSIFFEMVLACSLL 700
++ ++ + V C+LL
Sbjct: 670 KKL-------VYPDFVTLCTLL 684
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 159/672 (23%), Positives = 291/672 (43%), Gaps = 48/672 (7%)
Query: 134 ITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKP 193
+ + G + Q+F +K+ + YNMM++ +++ +ID+A L EM + C+P
Sbjct: 478 LAKAGRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 194 DAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVC 253
D N+LI+ +A + A +F M + P+ TYN L+ G G +EA+++
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 254 KKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKL 313
+ M + G P+ +T N + + + AL M PD T+N +I+ LVK
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 314 GQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENC-KGVFNTMLAEGLKPNI 372
GQ +A+ FH M++ PD VT +++ IE+ K + N + +P
Sbjct: 657 GQVKEAMCFFHQMKKL---VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713
Query: 373 VSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVK-AREVFN 431
+ + L+ + + A+S + NG+C D S + Y V AR +F
Sbjct: 714 LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFE 773
Query: 432 MMRIN-NLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC 490
+ ++P L +Y+ LI ++ A +VF +++ G P++ + LL A G+
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833
Query: 491 GRKVNIDAVL-LAAEM--RDIKLNTVAYNSAIGSYMNVGEYEKAIALY-KCMKKRKVMPD 546
G+ ID + L EM + + NT+ +N I + G + A+ LY M R P
Sbjct: 834 GK---IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 547 SVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFN 606
+ TY LI + R EA + M+D +Y+ +I+ + K G A ++F
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 607 MMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGG 666
M G PD+ TY+ ++ ++ F E++ + + PD + + ++ K
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 667 QPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLN 726
+ + L+ L + KT+ + + P + + +LN
Sbjct: 1011 RLEEALV-------------------------LFNEMKTS----RGITPDLYTYNSLILN 1041
Query: 727 QLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDA 786
LG +G +E K++ +I +G E N T++ L++ +G V Q M
Sbjct: 1042 -----LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 787 GIQPSYGMFRDI 798
G P+ G + +
Sbjct: 1097 GFSPNTGTYEQL 1108
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 237/532 (44%), Gaps = 7/532 (1%)
Query: 263 PDLVTHNIVLSAYKNGAQYSKALSYFELMKGT-NIRPDTTTHNIVIYCLVKLGQYDKAID 321
PDL + V K+ + SYF+ + G N+ T T N ++ L G+ ++
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139
Query: 322 LFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAA 381
+F M+++ + D T+ +I SV G ++ M G N SYN L+
Sbjct: 140 VFDLMQKRIIK--RDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHL 197
Query: 382 YASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPN 441
EA+ V+ + G P + +Y+SL+ G+ + + M LKPN
Sbjct: 198 LLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPN 257
Query: 442 LVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLL 501
+ +++ I G G + EA E+ + M+ +G P++V+ L+ A + V
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 502 AAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLS 561
+ K + V Y + + + + + + + M+K +PD VT+T+L+ + C+
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 562 RYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYT 621
+ EA LD M D I Y+++I + + +A +F M+ G P TY
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 622 AMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQ 681
+ Y + D A F +M+T I P+ +AC+A + + K G+ + + F +
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI--FYGLK 495
Query: 682 DITF-SDSIFFEMVLAC-SLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIE 739
DI DS+ + M++ C S + + I L+ +M + + ++N L++ L K+ R++
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 740 SMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
K+F ++ + TY+ LL L G ++ IE+ + M G P+
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 148/291 (50%), Gaps = 5/291 (1%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDI-YNMMIRLHARHNQIDKARGLFFE 185
+ FL+ + G I+ +++ M + C N I +N++I + +D A L+++
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHE--CEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 186 MQKWR-CKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
+ R P A TY LI ++G+ A +F+ ML P+ + YN LIN G G
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHN 304
A + K+M + GV PDL T+++++ + + L YF+ +K + + PD +N
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 305 IVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTML 364
++I L K + ++A+ LF+ M+ R PD+ T+ S+I + G +E ++N +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRG-ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLN 415
GL+PN+ ++NAL+ Y+ G + A +V+ + G P+ +Y L N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 90/206 (43%), Gaps = 1/206 (0%)
Query: 615 PDVITYTAMLHAYNTAEDWEKACALFLEMETN-NIEPDSIACSALMRAFNKGGQPSKVLL 673
PD+ + + + D + + + F + N N+ + C+ ++ A G+ ++
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139
Query: 674 VAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLG 733
V + M+++ I + + + + S+ K +++M V++ N L+HLL
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 734 KSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYG 793
KS M+++ +++ G + TYS L+ L + + +L+ ME G++P+
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 794 MFRDIVSFAQTRGGAEYAAIIQERIE 819
F + G A I +R++
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMD 285
Score = 39.7 bits (91), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 709 LIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLL 768
+++ PS S L+ LGK I+S+M L ++ + G + N T++I ++ L
Sbjct: 215 ILEGFRPSLQTYS-----SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 769 AAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMK 824
AG + E+L+ M+D G P + ++ T + A + E++++ R K
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 254/512 (49%), Gaps = 16/512 (3%)
Query: 175 QIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYN 234
++D A GLF +M K R P ++ L+SA + ++ +++ + M ++ + TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 235 NLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT 294
IN AL + KM + G GP +VT N +L+ + +G + S+A++ + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 295 NIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIE 354
+PDT T +++ L + + +A+ L M K C PD+VT+ ++I+ G+ +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPD 232
Query: 355 NCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLL 414
+ N M ++ ++V YN ++ + +A +FN+++ G+ PD+ +Y L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 415 NA---YGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREM-EQ 470
+ YGR A + + M N+ P+LV ++ALIDA+ G L EA +++ EM +
Sbjct: 293 SCLCNYGRWSD---ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIGSYMNVGEY 528
P++V+ TL+ G C K + + + EM R + NTV Y + I + +
Sbjct: 350 KHCFPDVVAYNTLIK--GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+ A ++K M V PD +TY +L+ C AL + M + L Y+++
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I A K G + + +F + + G P+V+TYT M+ + E+A ALF+EM+ +
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMRE 680
P+S + L+RA + G + AE ++E
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAA---SAELIKE 556
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 261/572 (45%), Gaps = 34/572 (5%)
Query: 79 RHRLAVEGN-RFQKDWSVS-----------EVVERVLELKHYEDVEGVLNRWVGRFARKN 126
RH + ++GN R W S + +VL+ +D G+ V +
Sbjct: 15 RHTVLLKGNPRTTLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMV---KSRP 71
Query: 127 FPFLI---KEITQRGAINHSNQVFNWMKNQKNYCARNDIY--NMMIRLHARHNQIDKARG 181
FP ++ K ++ +N + V + + +N +++Y ++ I R +Q+ A
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 182 LFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACG 241
+ +M K P T N+L++ + A+ + D M+ P T+ L++
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 242 STGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTT 301
EA+ + ++M G PDLVT+ V++ + AL+ M+ I D
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 302 THNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFN 361
+N +I L K D A DLF+ M K + PD+ T+ +I G+ + + +
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIK--PDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 362 TMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLC-PDIVSYTSLLNAYGRS 420
ML + + P++V +NAL+ A+ G EA +++E+ K+ C PD+V+Y +L+ + +
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 421 QQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSI 480
++ + EVF M L N V+Y+ LI + A VF++M DG+ P+I++
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 481 CTLLAACGRCGRKVNIDAVLLAAEM---RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKC 537
LL G C N++ L+ E RD+KL+ V Y + I + G+ E L+
Sbjct: 430 NILLD--GLCNNG-NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 538 MKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQ-VYSSVISAYSKQG 596
+ + V P+ VTYT ++S CR EA EM + PL N Y+++I A + G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE-DGPLPNSGTYNTLIRARLRDG 545
Query: 597 LIAEAESMFNMMKMSGCSPDVITY---TAMLH 625
A + + M+ G + D T+ T MLH
Sbjct: 546 DEAASAELIKEMRSCGFAGDASTFGLVTNMLH 577
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 190/438 (43%), Gaps = 40/438 (9%)
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449
+A+ +F ++ K+ P IV ++ LL+A + + + M+ + NL +YS I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 450 DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC-GRKVNIDAVLLAAEMRDI 508
+ + L+ A+ + +M + G P+IV++ +LL G C G +++ +AV L +M ++
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN--GFCHGNRIS-EAVALVDQMVEM 174
Query: 509 --KLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEA 566
+ +TV + + + + +A+AL + M + PD VTY +I+ C+ A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 567 LGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA 626
L L++M KI +Y+++I K + +A +FN M+ G PDV TY ++
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 627 YNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFS 686
W A L +M NI PD + +AL+ AF K G+ + + + M + F
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 687 DSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFF 746
D + + N L+ K R+E M++F
Sbjct: 355 DVVAY----------------------------------NTLIKGFCKYKRVEEGMEVFR 380
Query: 747 KIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRG 806
++ G N TY+ L+ A + V + M G+ P + ++ G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 807 GAEYAAIIQERIESLRMK 824
E A ++ E ++ MK
Sbjct: 441 NVETALVVFEYMQKRDMK 458
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/507 (20%), Positives = 222/507 (43%), Gaps = 39/507 (7%)
Query: 352 QIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYT 411
++++ G+F M+ P+IV ++ L++A A +S+ +++ G+ ++ +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 412 SLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQD 471
+N + R Q A + M P++V+ ++L++ + ++EAV + +M +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 472 GIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKA 531
G +P+ V+ TL+ + + A++ ++ + + V Y + I GE + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 532 IALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISA 591
+ L M+K K+ D V Y +I C+ +A ++M I Y+ +IS
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 592 YSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEM-ETNNIEP 650
G ++A + + M +PD++ + A++ A+ +A L+ EM ++ + P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 651 DSIACSALMRAFNK--------------------GGQPSKVLLVAEFMREQDITFSDSIF 690
D +A + L++ F K G + L+ F + +D + +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 691 FEMV--------LACSLLRDW-------KTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKS 735
+MV + ++L D +T + + + M+ + I ++ L K+
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 736 GRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMF 795
G++E LF + G + N TY+ ++ G + + M++ G P+ G +
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 796 RDIVSFAQTRGGAEYAAIIQERIESLR 822
++ A+ R G E A+ E I+ +R
Sbjct: 535 NTLIR-ARLRDGDEAAS--AELIKEMR 558
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 5/154 (3%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDI--YNMMIRLHARHNQIDKARGLFF 184
+ L+ + G + + VF +M+ + + DI Y MI + +++ LF
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRD---MKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 185 EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
+ KP+ TY ++S R G A +F +M P+ TYN LI A G
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNG 278
+ + ++ K+M G D T +V + +G
Sbjct: 546 DEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/577 (23%), Positives = 246/577 (42%), Gaps = 7/577 (1%)
Query: 97 EVVERVLELKHYEDVEGVLNRWVG---RFARKNFPFLIKEITQRGAINHSNQVFNWMKNQ 153
E++ R+ ++D++ +L F LI+ Q + V +WM ++
Sbjct: 88 EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147
Query: 154 KNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRW 213
YN M+ L N + +M W KPD T+N LI A RA Q R
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A+ + +DM + P T+ ++ G+ AL++ ++M E G V+ N+++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 274 AYKNGAQYSKALSYFELMKGTN-IRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSE 332
+ + AL++ + M + PD T N ++ L K G AI++ M ++ +
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 333 CLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEAL 392
PD+ T+ S+I G+++ V + M+ PN V+YN L++ +EA
Sbjct: 328 --PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 393 SVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAY 452
+ + G+ PD+ ++ SL+ ++ A E+F MR +P+ +Y+ LID+
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 453 GSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNT 512
S G L EA+ + ++ME G ++++ TL+ + + + + E+ + N+
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 513 VAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDE 572
V YN+ I E A L M PD TY L++ CR +A +
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 573 MMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAED 632
M Y ++IS K G + A + ++M G + Y ++
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Query: 633 WEKACALFLEM-ETNNIEPDSIACSALMRAFNKGGQP 668
+A LF EM E N PD+++ + R GG P
Sbjct: 626 TTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 149/642 (23%), Positives = 260/642 (40%), Gaps = 44/642 (6%)
Query: 193 PDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKV 252
P+ Y ++ GR+G + I +DM + ST+ LI + E L V
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 253 CKKMT-ENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLV 311
M E G+ PD +N +L+ +G M I+PD +T N++I L
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 312 KLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPN 371
+ Q AI + M +PD TFT+++ Y G ++ + M+ G +
Sbjct: 201 RAHQLRPAILMLEDM--PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 372 IVSYNALMAAYASHGMSKEALSVFNEIK-KNGLCPDIVSYTSLLNAYGRSQQPVKAREVF 430
VS N ++ + G ++AL+ E+ ++G PD ++ +L+N ++ A E+
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 431 NMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC 490
++M P++ +Y+++I G + EAVEV +M PN V+ TL++ C
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL--C 376
Query: 491 GRKVNIDAVLLAAEM--RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSV 548
+A LA + + I + +NS I + A+ L++ M+ + PD
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 549 TYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMM 608
TY +LI S C + EAL L +M + Y+++I + K EAE +F+ M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 609 KMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQP 668
++ G S + +TY ++ + E A L +M +PD ++L+ F +GG
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG-- 554
Query: 669 SKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQL 728
D K D+++ M + I L
Sbjct: 555 ---------------------------------DIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 729 LHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGI 788
+ L K+GR+E KL I G + Y+ +++ L + I + + M +
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 789 QPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMKSGDPSF 830
P + IV GG + +E L K P F
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE-KGFVPEF 682
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 225/547 (41%), Gaps = 49/547 (8%)
Query: 319 AIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNAL 378
A+ LF+ + K+ P+ + I+ +G ++ K + M + + ++ L
Sbjct: 66 ALRLFN-LASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124
Query: 379 MAAYASHGMSKEALSVFN-EIKKNGLCPDIVSYTSLLNAY--GRSQQPVKAREVFNMMRI 435
+ +YA + E LSV + I + GL PD Y +LN G S + V+ M +
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA--KMSV 182
Query: 436 NNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLA---------- 485
+KP++ +++ LI A L A+ + +M G+ P+ + T++
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 486 -----------ACGRCGRKVNI------------DAVLLAAEMRD---IKLNTVAYNSAI 519
C VN+ DA+ EM + + +N+ +
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 520 GSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIP 579
G + AI + M + PD TY +IS C+L EA+ LD+M+
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 580 LTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACAL 639
Y+++IS K+ + EA + ++ G PDV T+ +++ + A L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 640 FLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSL 699
F EM + EPD + L+ + G+ + L + + M S + ++
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 700 LRDWKTTIDLIKQMEPSFHVVSIGLL--NQLLHLLGKSGRIESMMKLFFKIVSSGAEANF 757
+ ++ +ME H VS + N L+ L KS R+E +L +++ G + +
Sbjct: 483 ANKTREAEEIFDEME--VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 758 NTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQER 817
TY+ LL + G+ +K +++Q M G +P + ++S G E A+ +
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL--- 597
Query: 818 IESLRMK 824
+ S++MK
Sbjct: 598 LRSIQMK 604
>sp|Q9C9U0|PP118_ARATH Pentatricopeptide repeat-containing protein At1g73710
OS=Arabidopsis thaliana GN=At1g73710 PE=2 SV=1
Length = 991
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 248/520 (47%), Gaps = 23/520 (4%)
Query: 197 TYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKM 256
T+N LI +G+AG+ A N+F +ML++ V T+N +I+ CG+ G+ EA + KKM
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 257 TENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQY 316
E G+ PD T+NI+LS + + AL Y+ ++ + PDT TH V++ L +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 317 DKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYN 376
+ + M R+ D + I+ +Y G + K +F + + + +
Sbjct: 427 AEVEAVIAEM--DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLA 483
Query: 377 ALMAAYASHGMSKEALSVF-NEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRI 435
A++ YA G+ EA +VF + +G D++ Y ++ AYG+++ KA +F M+
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 436 NNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVN 495
P+ +Y++L L+ EA + EM G +P + ++A+ R G +
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 496 IDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLIS 555
+ A E +K N V Y S I + G E+AI ++ M++ V + + T LI
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 556 SCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSP 615
+ ++ EA D+M D + +S++S + G+++EAES+FN ++ G +
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TC 722
Query: 616 DVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVA 675
DVI++ M++ Y ++A + EM + + D + + +M + GQ S+
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECC--- 779
Query: 676 EFMREQDITFSDSIFFEMVLACSLLRDW---KTTIDLIKQ 712
+F EM++ LL DW KT L+K+
Sbjct: 780 ------------ELFHEMLVERKLLLDWGTFKTLFTLLKK 807
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 158/680 (23%), Positives = 287/680 (42%), Gaps = 21/680 (3%)
Query: 129 FLIKEITQRGAINHSNQVFNWMKNQKNYCAR---NDIYNMMIRLHARHNQIDKARGLFFE 185
FL E+ + GA N + ++ + + +N +I L+ + +++ A LF E
Sbjct: 271 FLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSE 330
Query: 186 MQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGN 245
M K D T+N +I G G A ++ M ++P TYN L++ G+
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
Query: 246 WREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNI 305
AL+ +K+ + G+ PD VTH VL ++ + M +IR D + +
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 306 VIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVF-NTML 364
++ V G +A LF + +C+ T ++I +Y+ G + VF
Sbjct: 451 IMQMYVNEGLVVQAKALFERF---QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRN 507
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPV 424
G + +++ YN ++ AY + ++ALS+F +K G PD +Y SL
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 425 KAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLL 484
+A+ + M + KP +Y+A+I +Y GLL++AV+++ ME+ G++PN V +L+
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 485 AACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVM 544
G E ++ N + S I +Y VG E+A +Y MK +
Sbjct: 628 NGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 545 PDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESM 604
PD ++S C L SEA + + + K +++++ Y G++ EA +
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALRE-KGTCDVISFATMMYLYKGMGMLDEAIEV 746
Query: 605 FNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETN-NIEPDSIACSALMRAFN 663
M+ SG D ++ ++ Y + C LF EM + D L
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 664 KGGQPSKVL--LVAEFMREQDI---TFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFH 718
KGG PS+ + L + + + + ++F M L L + +L P H
Sbjct: 807 KGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQ---ELTSGEIPREH 863
Query: 719 VVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIE 778
N +++ SG I+ +K + ++ G E + T + L+ AG
Sbjct: 864 FA----YNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKR 919
Query: 779 VLQWMEDAGIQPSYGMFRDI 798
V + ++PS +F+ +
Sbjct: 920 VHSRLTFGELEPSQSLFKAV 939
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 159/735 (21%), Positives = 334/735 (45%), Gaps = 44/735 (5%)
Query: 110 DVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRL 169
D+E L + K L+KE T+ + +VF + ++ ++Y YN+++R
Sbjct: 98 DIETTLASLCLNLSPKEQTVLLKEQTRWERVL---RVFRFFQSHQSYVPNVIHYNIVLRA 154
Query: 170 HARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPS 229
R + D+ R + EM P TY L+ +G+AG + A+ M + P
Sbjct: 155 LGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPD 214
Query: 230 RSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS----KAL 285
T ++ ++G + A + K V DL + + KNG+ S K
Sbjct: 215 EVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDL---DSIDDFPKNGSAQSPVNLKQF 271
Query: 286 SYFELMK---------------GTNIRPD----TTTHNIVIYCLVKLGQYDKAIDLFHSM 326
EL K G++ P T+T N +I K G+ + A +LF M
Sbjct: 272 LSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEM 331
Query: 327 REKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHG 386
+S D VTF ++IH +G + + + M +G+ P+ +YN L++ +A G
Sbjct: 332 L--KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAG 389
Query: 387 MSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYS 446
+ AL + +I+K GL PD V++ ++L+ + + + V M N+++ + S
Sbjct: 390 DIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVP 449
Query: 447 ALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAE-M 505
++ Y + GL+ +A +F + D + + ++ ++ G V + V M
Sbjct: 450 VIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLAAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 506 RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSE 565
+ + + YN I +Y +EKA++L+K MK + PD TY L + E
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 566 ALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLH 625
A L EM+D + Y+++I++Y + GL+++A ++ M+ +G P+ + Y ++++
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 626 AYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQ---- 681
+ + E+A F ME + ++ + I ++L++A++K G + V + M++
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 682 DITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESM 741
D+ S+S+ + ++ + ++ + +++ + + V+S +++L G ++
Sbjct: 689 DVAASNSM-LSLCADLGIVSEAESIFNALRE-KGTCDVISFA---TMMYLYKGMGMLDEA 743
Query: 742 MKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWM-EDAGIQPSYGMFRDIVS 800
+++ ++ SG ++ +++ ++ A G + E+ M + + +G F+ + +
Sbjct: 744 IEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFT 803
Query: 801 FAQTRGGAEYAAIIQ 815
+ +GG A+ Q
Sbjct: 804 LLK-KGGVPSEAVSQ 817
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 217/498 (43%), Gaps = 49/498 (9%)
Query: 98 VVERVLELKHYEDVEGV---LNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNWMKNQK 154
V+ + + K +VE V ++R R + P +++ G + + +F + Q
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE--RFQL 473
Query: 155 NYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRC-KPDAETYNALISAHGRAGQWRW 213
+ + +I ++A +A +F+ + + D YN +I A+G+A
Sbjct: 474 DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A+++F M P TYN+L EA ++ +M ++G P T+ +++
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
+Y S A+ +E M+ T ++P+ + +I + G ++AI F M E +
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ- 652
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
+ + TS+I YS G +E + V++ M P++ + N++++ A G+ EA S
Sbjct: 653 -SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYG 453
+FN +++ G C D++S+ +++ Y +A EV MR + L + S++ ++ Y
Sbjct: 712 IFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYA 770
Query: 454 SNGLLAEAVEVFREM--------------------EQDGIEPNIVS-------------- 479
++G L+E E+F EM ++ G+ VS
Sbjct: 771 ADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLAT 830
Query: 480 ---ICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYK 536
TL +A G + L + E I AYN+ I +Y G+ + A+ Y
Sbjct: 831 PAITATLFSAMGLYAYALESCQELTSGE---IPREHFAYNAVIYTYSASGDIDMALKAYM 887
Query: 537 CMKKRKVMPDSVTYTVLI 554
M+++ + PD VT L+
Sbjct: 888 RMQEKGLEPDIVTQAYLV 905
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 192 bits (489), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 236/517 (45%), Gaps = 38/517 (7%)
Query: 164 NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLR 223
++MI R ++ A ++ K +PD T++ LI+ G+ A+ + D M+
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 224 AAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSK 283
P+ T N L+N G +A+ + +M E G P+ VT+ VL Q +
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 284 ALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSI 343
A+ M+ I+ D ++I+I L K G D A +LF+ M K + DI+ +T++
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADIIIYTTL 288
Query: 344 IHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGL 403
I + G+ ++ + M+ + P++V+++AL+ + G +EA + E+ + G+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 404 CPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVE 463
PD V+YTSL++ + + Q KA + ++M PN+ +++ LI+ Y L+ + +E
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 464 VFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYM 523
+FR+M +R + +TV YN+ I +
Sbjct: 409 LFRKMS-----------------------------------LRGVVADTVTYNTLIQGFC 433
Query: 524 NVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQ 583
+G+ E A L++ M R+V PD V+Y +L+ C +AL +++ K+ L
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 584 VYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEM 643
+Y+ +I + +A +F + + G PDV TY M+ +A LF +M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 644 ETNNIEPDSIACSALMRA-FNKGGQPSKVLLVAEFMR 679
E + P+ + L+RA +G L+ E R
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 260/579 (44%), Gaps = 47/579 (8%)
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A+++F +M R+ P ++ L + T + L +CK+M G+ +L T +I+++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
+ S A S + ++KLG Y+
Sbjct: 116 CCCRCRKLSLAFS-------------------AMGKIIKLG-YE---------------- 139
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
PD VTF+++I+ + G++ + + M+ G KP +++ NAL+ +G +A+
Sbjct: 140 -PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYG 453
+ + + + G P+ V+Y +L +S Q A E+ M +K + V YS +ID
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 454 SNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTV 513
+G L A +F EME G + +I+ TL+ GR + +L R I + V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 514 AYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEM 573
A+++ I ++ G+ +A L+K M +R + PD+VTYT LI C+ ++ +A LD M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 574 MDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDW 633
+ + ++ +I+ Y K LI + +F M + G D +TY ++ +
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 634 EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMR----EQDITFSDSI 689
E A LF EM + + PD ++ L+ G+P K L + E + E DI + I
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 690 FFEMVLACSLLRDWKTTIDL-IKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKI 748
M A + W L +K ++P +I ++ L K G + LF K+
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI-----MIGGLCKKGSLSEADLLFRKM 553
Query: 749 VSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAG 787
G N TY+IL++ L G+ K ++++ ++ G
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 221/511 (43%), Gaps = 14/511 (2%)
Query: 177 DKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNL 236
D A LF EM + R +P ++ L S R Q+ +++ M +A + T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 237 INACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNI 296
IN C A K+ + G PD VT + +++ + S+AL + M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 297 RPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENC 356
+P T N ++ L G+ A+ L M E + P+ VT+ ++ + +GQ
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ--PNEVTYGPVLKVMCKSGQTALA 231
Query: 357 KGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNA 416
+ M +K + V Y+ ++ G A ++FNE++ G DI+ YT+L+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 417 YGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPN 476
+ + + ++ M + P++V++SALID + G L EA E+ +EM Q GI P+
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 477 IVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKL------NTVAYNSAIGSYMNVGEYEK 530
V+ +L+ G C ++ +D A M D+ + N +N I Y +
Sbjct: 352 TVTYTSLID--GFC-KENQLDK---ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 531 AIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVIS 590
+ L++ M R V+ D+VTY LI C L + A EM+ ++ Y ++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 591 AYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEP 650
G +A +F ++ S D+ Y ++H A + A LF + ++P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 651 DSIACSALMRAFNKGGQPSKVLLVAEFMREQ 681
D + ++ K G S+ L+ M E
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 159/314 (50%), Gaps = 2/314 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y+++I + +D A LF EM+ K D Y LI AG+W + DM+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ + P ++ LI+ G REA ++ K+M + G+ PD VT+ ++ + Q
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
KA +LM P+ T NI+I K D ++LF M + + D VT+ +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR--GVVADTVTYNT 427
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I + G++E K +F M++ ++P+IVSY L+ +G ++AL +F +I+K+
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ DI Y +++ + + A ++F + + +KP++ +Y+ +I G L+EA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 463 EVFREMEQDGIEPN 476
+FR+ME+DG PN
Sbjct: 548 LLFRKMEEDGHSPN 561
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 176/392 (44%), Gaps = 2/392 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y ++++ + Q A L +M++ + K DA Y+ +I + G A N+F++M
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
Y LI G W + K+ + M + + PD+V + ++ + +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+A + M I PDT T+ +I K Q DKA + M K C P+I TF
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK--GCGPNIRTFNI 392
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I+ Y I++ +F M G+ + V+YN L+ + G + A +F E+
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PDIVSY LL+ + +P KA E+F + + ++ ++ Y+ +I + + +A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
++F + G++P++ + ++ + G D + E N YN I ++
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLI 554
+ G+ K+ L + +K+ D+ T +++
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 207/464 (44%), Gaps = 24/464 (5%)
Query: 373 VSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNM 432
VSY + + +A+ +F E+ ++ P ++ ++ L + R++Q ++
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 433 MRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGR 492
M + + NL + S +I+ L+ A ++ + G EP+ V+ TL+ G C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN--GLCLE 155
Query: 493 KVNIDAVLLAAEMRDI--KLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTY 550
+A+ L M ++ K + N+ + G+ A+ L M + P+ VTY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 551 TVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKM 610
++ C+ + + A+ L +M + KI L YS +I K G + A ++FN M++
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 611 SGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSK 670
G D+I YT ++ + A W+ L +M I PD +A SAL+ F K G+ +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 671 VLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVV---------- 720
+ + M ++ I+ D++ + SL+ + Q++ + H++
Sbjct: 336 AEELHKEMIQRGIS-PDTVTYT-----SLIDGFCKE----NQLDKANHMLDLMVSKGCGP 385
Query: 721 SIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVL 780
+I N L++ K+ I+ ++LF K+ G A+ TY+ L++ G E+
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 781 QWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMK 824
Q M ++P ++ ++ G E A I E+IE +M+
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 254/509 (49%), Gaps = 7/509 (1%)
Query: 171 ARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSR 230
A+ N+ D L +MQ + TY+ LI+ R Q A+ + M++ P+
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 231 STYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFEL 290
T ++L+N + EA+ + +M G P+ VT N ++ + S+A++ +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 291 MKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVN 350
M +PD T+ +V+ L K G D A +L + M + + E P ++ + +II
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE--PGVLIYNTIIDGLCKY 269
Query: 351 GQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSY 410
+++ +F M +G++PN+V+Y++L++ ++G +A + +++ + + PD+ ++
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 411 TSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQ 470
++L++A+ + + V+A ++++ M ++ P++V+YS+LI+ + + L EA ++F M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIGSYMNVGEY 528
P++V+ TL+ G C K + + + EM R + NTV YN I G+
Sbjct: 390 KHCFPDVVTYNTLIK--GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+ A ++K M V P+ +TY L+ C+ + +A+ + + K+ T Y+ +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I K G + + +F + + G PDV+ Y M+ + E+A ALF EM+ +
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 649 EPDSIACSALMRA-FNKGGQPSKVLLVAE 676
P+S + L+RA G + + L+ E
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 146/578 (25%), Positives = 280/578 (48%), Gaps = 29/578 (5%)
Query: 175 QIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYN 234
++D A LF EM K R P ++ L+SA + ++ +++ + M + + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 235 NLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT 294
LIN AL V KM + G P++VT + +L+ Y + + S+A++ + M T
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 295 NIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIE 354
+P+T T N +I+ L + +A+ L M K C PD+VT+ +++ G +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK--GCQPDLVTYGVVVNGLCKRGDTD 238
Query: 355 NCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLL 414
+ N M L+P ++ YN ++ + +AL++F E++ G+ P++V+Y+SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 415 NA---YGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQD 471
+ YGR A + + M + P++ ++SALIDA+ G L EA +++ EM +
Sbjct: 299 SCLCNYGRWSD---ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 472 GIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKL------NTVAYNSAIGSYMNV 525
I+P+IV+ +L+ G C D + A +M + + + V YN+ I +
Sbjct: 356 SIDPSIVTYSSLIN--GFCMH----DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 526 GEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVY 585
E+ + +++ M +R ++ ++VTY +LI + A EM+ +P Y
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 586 SSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMET 645
++++ K G + +A +F ++ S P + TY M+ A E LF +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 646 NNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLR-DWK 704
++PD +A + ++ F + G + + + M+E D T +S + ++ L D +
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNTLIRARLRDGDRE 588
Query: 705 TTIDLIKQMEP---SFHVVSIGLLNQLLHLLGKSGRIE 739
+ +LIK+M + +IGL+ +LH GR++
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNMLH----DGRLD 622
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 173/332 (52%), Gaps = 2/332 (0%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
IYN +I ++ +D A LF EM+ +P+ TY++LIS G+W A + DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
+ + P T++ LI+A G EA K+ +M + + P +VT++ +++ + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
+A FE M + PD T+N +I K + ++ +++F M ++ + + VT+
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR--GLVGNTVTYN 435
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKN 401
+I G + + +F M+++G+ PNI++YN L+ +G ++A+ VF ++++
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 402 GLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEA 461
+ P I +Y ++ ++ + ++F + + +KP++V+Y+ +I + G EA
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRK 493
+F+EM++DG PN TL+ A R G +
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 209/443 (47%), Gaps = 16/443 (3%)
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449
+A+++F E+ K+ P I+ ++ LL+A + + + M+ + N +YS LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 450 DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RD 507
+ + L A+ V +M + G EPNIV++ +LL G C K +AV L +M
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN--GYCHSKRISEAVALVDQMFVTG 181
Query: 508 IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEAL 567
+ NTV +N+ I + +A+AL M + PD VTY V+++ C+ A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 568 GFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAY 627
L++M K+ +Y+++I K + +A ++F M+ G P+V+TY++++
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 628 NTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSD 687
W A L +M I PD SAL+ AF K G+ L+ AE + ++ +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK----LVEAEKLYDEMV--KR 355
Query: 688 SIFFEMVLACSLLRDW--KTTIDLIKQMEP---SFHVV-SIGLLNQLLHLLGKSGRIESM 741
SI +V SL+ + +D KQM S H + N L+ K R+E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 742 MKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSF 801
M++F ++ G N TY+IL++ L AG+ E+ + M G+ P+ + ++
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 802 AQTRGGAEYAAIIQERIESLRMK 824
G E A ++ E ++ +M+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKME 498
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+ A+AL+ M K + P + ++ L+S+ +++++ + ++M +L IP + YS +
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I+ + ++ + A ++ M G P+++T +++L+ Y ++ +A AL +M
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLR-DWKTTI 707
+P+++ + L+ + S+ + + + M + D + + +V+ R D
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ-PDLVTYGVVVNGLCKRGDTDLAF 241
Query: 708 DLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNL 767
+L+ +ME + + N ++ L K ++ + LF ++ + G N TYS L+ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 768 LAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV-SFAQTRGGAEYAAIIQERIESLRMKSG 826
G W +L M + I P F ++ +F + E + E ++ +S
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK----RSI 357
Query: 827 DPS 829
DPS
Sbjct: 358 DPS 360
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
LIK + + +VF M +Q+ YN++I+ + D A+ +F EM
Sbjct: 402 LIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
P+ TYN L+ + G+ AM +F+ + R+ + P+ TYN +I G +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
+ ++ GV PD+V +N ++S + +A + F+ MK P++ +N +I
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 310 LVKLGQYDKAIDLFHSMR 327
++ G + + +L MR
Sbjct: 581 RLRDGDREASAELIKEMR 598
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEM 186
+ LI+ + Q G + + ++F M + YN ++ ++ +++KA +F +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 187 QKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNW 246
Q+ + +P TYN +I +AG+ ++F ++ V P YN +I+ G+
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 247 REALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIV 306
EA + K+M E+G P+ +N ++ A + + M+ D +T +V
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Query: 307 IYCLVKLGQYDKAI 320
L G+ DK+
Sbjct: 613 TNMLHD-GRLDKSF 625
>sp|Q9LS88|PP250_ARATH Pentatricopeptide repeat-containing protein At3g23020
OS=Arabidopsis thaliana GN=At3g23020 PE=2 SV=1
Length = 842
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 192/781 (24%), Positives = 324/781 (41%), Gaps = 179/781 (22%)
Query: 91 KDWSVSEVVERVLE-LKHYEDVEGVLNRWVGRFARKNFPFLIKE-ITQRGAINHSNQVFN 148
K S + +LE L EDVE L+ W R + K ++KE I A+ ++F
Sbjct: 120 KRLSYGGCIPAILEALDSIEDVEDALSPWAERLSNKERTIILKEQIHWERAV----EIFE 175
Query: 149 WMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRA 208
W K++ Y YN+M+R+ G+A
Sbjct: 176 WFKSKGCYELNVIHYNIMLRIL-----------------------------------GKA 200
Query: 209 GQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTH 268
+WR+ +++D+M+R + P STY LI+ G AL KM++ G+ PD VT
Sbjct: 201 CKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTT 260
Query: 269 NIVLSAYKNGAQYSKALSYFELMKGTNIRPD------TTTHNIVIYCLVKLGQYDKAIDL 322
IVL YK ++ KA +F+ + D + T+N +I K GQ +A +
Sbjct: 261 GIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASET 320
Query: 323 FHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAY 382
F M E+ +P VTF ++IH+Y NGQ+ + TM P+ +YN L++ +
Sbjct: 321 FKRMLEEG--IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLH 377
Query: 383 ASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLK--- 439
+ + A + F E+K +GL PD VSY +LL A+ +A + M +N++
Sbjct: 378 TKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE 437
Query: 440 -----------------------------PNLVS--YSALIDAYGSNGLLAE-------- 460
N+ S YSA IDAYG G L+E
Sbjct: 438 YTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICC 497
Query: 461 --------------------------AVEVFREMEQDGIEPNIVSICTL---LAAC---- 487
A E+F M G+ P+ + TL LA+
Sbjct: 498 QEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPH 557
Query: 488 -GRCGRKVNIDAVLLAAEMRDIKL--NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVM 544
GRC +MR+ + + Y + I S++ +G+ A +YK M + +
Sbjct: 558 KGRC----------YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE 607
Query: 545 PDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESM 604
PD V Y VLI++ +A+ +++ M + IP + +Y+S+I Y+K G + EAE++
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Query: 605 FNMMKMSGCS----PDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMR 660
+ + + C+ PDV T M++ Y+ KA A+F M+ E + + ++
Sbjct: 668 YRKL-LQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLC 725
Query: 661 AFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVV 720
+ K G+ + +A+ MRE I +D + +
Sbjct: 726 MYKKNGRFEEATQIAKQMREMKI-LTDPLSY----------------------------- 755
Query: 721 SIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVL 780
N +L L GR + ++ F ++VSSG + + +T+ L L+ G +K + +
Sbjct: 756 -----NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKI 810
Query: 781 Q 781
+
Sbjct: 811 E 811
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/566 (24%), Positives = 240/566 (42%), Gaps = 56/566 (9%)
Query: 165 MMIRLHARHNQIDKARGLFFEMQKWRC---KPDAE------TYNALISAHGRAGQWRWAM 215
++++++ + + KA F +KW C K D+ TYN +I +G++GQ + A
Sbjct: 262 IVLQMYKKAREFQKAEEFF---KKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEAS 318
Query: 216 NIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAY 275
F ML + P+ T+N +I+ G+ G E + K M + PD T+NI++S +
Sbjct: 319 ETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLH 377
Query: 276 KNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLP 335
+A +YF+ MK ++PD ++ ++Y ++A L M + E
Sbjct: 378 TKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEI-- 435
Query: 336 DIVTFTSIIHLYSVNGQIENCKGVF------NTMLAEGLKPNI----------------- 372
D T +++ +Y +E F M +EG NI
Sbjct: 436 DEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFI 495
Query: 373 ----------VSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQ 422
+ YN ++ AY ++A +F + G+ PD +Y +L+ +
Sbjct: 496 CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADM 555
Query: 423 PVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICT 482
P K R MR + + Y A+I ++ G L A EV++EM + IEP++V
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 483 LLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYK-----C 537
L+ A G + + A + I N+V YNS I Y VG ++A A+Y+ C
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 538 MKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGL 597
K + PD T +I+ S +A D M + ++ ++ Y K G
Sbjct: 676 NKTQ--YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ-RGEANEFTFAMMLCMYKKNGR 732
Query: 598 IAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSA 657
EA + M+ D ++Y ++L + +++A F EM ++ I+PD +
Sbjct: 733 FEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS 792
Query: 658 LMRAFNKGGQPSKVLLVAEFMREQDI 683
L K G K + E +R+++I
Sbjct: 793 LGTILMKLGMSKKAVRKIEEIRKKEI 818
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 225/492 (45%), Gaps = 56/492 (11%)
Query: 145 QVFNWMKNQKNYCARND-IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALIS 203
+V + MK K +CA + YN++I LH ++N I++A F EM+ KPD +Y L+
Sbjct: 351 EVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLY 410
Query: 204 AHGRAGQWRWAMNIFDDM--------------------------------LRAAVAPSRS 231
A A + +M R VA + S
Sbjct: 411 AFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMS 470
Query: 232 T--YNNLINACGSTGNWREALKV---CKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALS 286
+ Y+ I+A G G EA +V C+++ + V + +N+++ AY KA
Sbjct: 471 SEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV----IEYNVMIKAYGISKSCEKACE 526
Query: 287 YFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKR--SECLPDIVTFTSII 344
FE M + PD T+N ++ L K MRE S+C+P +S +
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV 586
Query: 345 HLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLC 404
L GQ+ + V+ M+ ++P++V Y L+ A+A G ++A+S +K+ G+
Sbjct: 587 KL----GQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 405 PDIVSYTSLLNAYGRSQQPVKAREVFN--MMRINNLK-PNLVSYSALIDAYGSNGLLAEA 461
+ V Y SL+ Y + +A ++ + N + P++ + + +I+ Y ++ +A
Sbjct: 643 GNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNT--VAYNSAI 519
+F M+Q G E N + +L + GR +A +A +MR++K+ T ++YNS +
Sbjct: 703 EAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFE--EATQIAKQMREMKILTDPLSYNSVL 759
Query: 520 GSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIP 579
G + G +++A+ +K M + PD T+ L + +L +A+ ++E+ +I
Sbjct: 760 GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Query: 580 LTNQVYSSVISA 591
+++ S +S+
Sbjct: 820 RGLELWISTLSS 831
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 149/323 (46%), Gaps = 13/323 (4%)
Query: 81 RLAVEGNRFQKDWSVSEVVERVLELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAI 140
R +E N K + +S+ E+ EL E +++ G K + +I +
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACEL-----FESMMS--YGVTPDKCTYNTLVQILASADM 555
Query: 141 NHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNA 200
H + + + Y + Y +I + Q++ A ++ EM ++ +PD Y
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 201 LISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTEN- 259
LI+A G + AM+ + M A + + YN+LI G EA + +K+ ++
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 260 --GVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYD 317
PD+ T N +++ Y + KA + F+ MK + T +++ K G+++
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFE 734
Query: 318 KAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNA 377
+A + MRE + L D +++ S++ L++++G+ + F M++ G++P+ ++ +
Sbjct: 735 EATQIAKQMREMK--ILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS 792
Query: 378 LMAAYASHGMSKEALSVFNEIKK 400
L GMSK+A+ EI+K
Sbjct: 793 LGTILMKLGMSKKAVRKIEEIRK 815
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 248/503 (49%), Gaps = 29/503 (5%)
Query: 120 GRFARKNFPFLIKEITQRGAINHSNQV---------FNWMKNQKNYCARNDIY--NMMIR 168
G ++ N F ++++ NH Q+ F +++N + DI +IR
Sbjct: 89 GHYSSVNSSFALEDVESN---NHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIR 145
Query: 169 LHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAP 228
R + KA + ++ PD TYN +IS + +AG+ A+++ D R +V+P
Sbjct: 146 GFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSP 202
Query: 229 SRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYF 288
TYN ++ + +G ++A++V +M + PD++T+ I++ A + A+
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 289 ELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYS 348
+ M+ PD T+N+++ + K G+ D+AI + M S C P+++T I+
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMC 320
Query: 349 VNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIV 408
G+ + + + ML +G P++V++N L+ G+ A+ + ++ ++G P+ +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 409 SYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREM 468
SY LL+ + + ++ +A E M P++V+Y+ ++ A +G + +AVE+ ++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 469 EQDGIEPNIVSICTL---LAACGRCGRKVNIDAVLLAAEMR--DIKLNTVAYNSAIGSYM 523
G P +++ T+ LA G+ G+ A+ L EMR D+K +T+ Y+S +G
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGK-----AIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 524 NVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQ 583
G+ ++AI + ++ + P++VT+ ++ C+ + A+ FL M++
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 584 VYSSVISAYSKQGLIAEAESMFN 606
Y+ +I + +G+ EA + N
Sbjct: 556 SYTILIEGLAYEGMAKEALELLN 578
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 217/468 (46%), Gaps = 9/468 (1%)
Query: 207 RAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLV 266
R G+ ++M+ P LI G R+A K+ + + +G PD++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 267 THNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSM 326
T+N+++S Y + + ALS + M ++ PD T+N ++ L G+ +A+++ M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 327 REKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHG 386
++ +C PD++T+T +I + + + + + M G P++V+YN L+ G
Sbjct: 231 LQR--DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 387 MSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYS 446
EA+ N++ +G P+++++ +L + + + + A ++ M P++V+++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 447 ALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM- 505
LI+ GLL A+++ +M Q G +PN +S LL G C K A+ M
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH--GFCKEKKMDRAIEYLERMV 406
Query: 506 -RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYS 564
R + V YN+ + + G+ E A+ + + + P +TY +I + +
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 565 EALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAML 624
+A+ LDEM + YSS++ S++G + EA F+ + G P+ +T+ +++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 625 HAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVL 672
+ ++A + M +P+ + + L+ G + L
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 196/434 (45%), Gaps = 5/434 (1%)
Query: 193 PDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKV 252
PD LI R G+ R A I + + + P TYN +I+ G AL V
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 253 CKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVK 312
+M+ V PD+VT+N +L + + + +A+ + M + PD T+ I+I +
Sbjct: 195 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 313 LGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNI 372
A+ L MR++ C PD+VT+ +++ G+++ N M + G +PN+
Sbjct: 252 DSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 373 VSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNM 432
+++N ++ + S G +A + ++ + G P +V++ L+N R +A ++
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 433 MRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGR 492
M + +PN +SY+ L+ + + A+E M G P+IV+ T+L A + G+
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 493 KVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTV 552
+ +L + + YN+ I G+ KAI L M+ + + PD++TY+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 553 LISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSG 612
L+ R + EA+ F E + I ++S++ K A M G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 613 CSPDVITYTAMLHA 626
C P+ +YT ++
Sbjct: 550 CKPNETSYTILIEG 563
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 191/378 (50%), Gaps = 18/378 (4%)
Query: 97 EVVERVLELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNWMKNQKNY 156
EV++R+L+ Y DV + LI+ + + H+ ++ + M+++
Sbjct: 225 EVLDRMLQRDCYPDV-------------ITYTILIEATCRDSGVGHAMKLLDEMRDRG-- 269
Query: 157 CARNDI-YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAM 215
C + + YN+++ + ++D+A +M C+P+ T+N ++ + G+W A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 216 NIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAY 275
+ DMLR +PS T+N LIN G A+ + +KM ++G P+ +++N +L +
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 276 KNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLP 335
+ +A+ Y E M PD T+N ++ L K G+ + A+++ + + K C P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK--GCSP 447
Query: 336 DIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVF 395
++T+ ++I + G+ + + M A+ LKP+ ++Y++L+ + G EA+ F
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 396 NEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSN 455
+E ++ G+ P+ V++ S++ +S+Q +A + M KPN SY+ LI+
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 456 GLLAEAVEVFREMEQDGI 473
G+ EA+E+ E+ G+
Sbjct: 568 GMAKEALELLNELCNKGL 585
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 228/491 (46%), Gaps = 40/491 (8%)
Query: 298 PDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCK 357
PD +I +LG+ KA + + + S +PD++T+ +I Y G+I N
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEIL--EGSGAVPDVITYNVMISGYCKAGEINNAL 192
Query: 358 GVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAY 417
V + M + P++V+YN ++ + G K+A+ V + + + PD+++YT L+ A
Sbjct: 193 SVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 418 GRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNI 477
R A ++ + MR P++V+Y+ L++ G L EA++ +M G +PN+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 478 VSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKC 537
++ +L + GR ++ + +L + + V +N I G +AI + +
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 538 MKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGL 597
M + P+S++Y L+ C+ + A+ +L+ M+ Y+++++A K G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 598 IAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSA 657
+ +A + N + GCSP +ITY ++ A KA L EM +++PD+I S+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 658 LMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSF 717
L+ ++ G+ + + +F E FE + I+ +F
Sbjct: 490 LVGGLSREGKVDEAI---KFFHE----------FERM--------------GIRPNAVTF 522
Query: 718 HVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYI 777
+ + +GL KS + + + +++ G + N +Y+IL++ L G ++ +
Sbjct: 523 NSIMLGLC--------KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 778 EVLQWMEDAGI 788
E+L + + G+
Sbjct: 575 ELLNELCNKGL 585
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/512 (20%), Positives = 218/512 (42%), Gaps = 46/512 (8%)
Query: 310 LVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLK 369
+V+ G+ ++ +M + +PDI+ T++I + G+ + + G
Sbjct: 112 MVRTGELEEGFKFLENMVYHGN--VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREV 429
P++++YN +++ Y G ALSV + + + PD+V+Y ++L + S + +A EV
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 430 FNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGR 489
+ M + P++++Y+ LI+A + + A+++ EM G P++V+ L+ +
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 490 CGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVT 549
GR L + N + +N + S + G + A L M ++ P VT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 550 YTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMK 609
+ +LI+ CR A+ L++M + Y+ ++ + K+ + A M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 610 MSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPS 669
GC PD++TY ML A E A + ++ + P I + ++ K G+
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 670 KVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLL 729
K + + + MR +D+ D+I + + L+
Sbjct: 467 KAIKLLDEMRAKDLK-PDTITY----------------------------------SSLV 491
Query: 730 HLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQ 789
L + G+++ +K F + G N T++ ++ L + + I+ L +M + G +
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 790 PSYGMFRDIVSFAQTRGGAEYAAIIQERIESL 821
P+ + ++ G Y + +E +E L
Sbjct: 552 PNETSYTILIE------GLAYEGMAKEALELL 577
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 252/521 (48%), Gaps = 6/521 (1%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y ++R ++D A GLF M K R P +N L+SA + ++ +++ + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
R ++ + TYN LIN AL + KM + G P +VT + +L+ Y +G + S
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A++ + M RPDT T +I+ L + +A+ L M ++ C P++VT+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR--GCQPNLVTYGV 230
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+++ G I+ + N M A ++ N+V Y+ ++ + + +AL++F E++ G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ P++++Y+SL++ ++ A + + M + PN+V+++ALIDA+ G L EA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIG 520
+++ EM + I+P+I + +L+ G C +A + M +D N V YN+ I
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
+ ++ + L++ M +R ++ ++VTYT LI + A +M+ +
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 581 TNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALF 640
Y++++ K G + +A +F ++ S P + TY M+ A E LF
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 641 LEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQ 681
+ ++PD I + ++ F + G + + MRE
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 222/490 (45%), Gaps = 37/490 (7%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN++I R +QI A L +M K +P T ++L++ + + A+ + D M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
P T+ LI+ EA+ + +M + G P+LVT+ +V++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A + M+ I + ++ VI L K D A++LF M K P+++T++S
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR--PNVITYSS 300
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I + + + + M+ + PN+V++NAL+ A+ G EA +++E+ K
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PDI +Y+SL+N + + +A+ +F +M + PN+V+Y+ LI+ + + E V
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
E+FREM Q R + NTV Y + I +
Sbjct: 421 ELFREMSQ-----------------------------------RGLVGNTVTYTTLIHGF 445
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
+ + A ++K M V P+ +TY L+ C+ + +A+ + + K+ T
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLE 642
Y+ +I K G + + +F + + G PDVI Y M+ + E+A ALF +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 643 METNNIEPDS 652
M + PDS
Sbjct: 566 MREDGPLPDS 575
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 200/377 (53%), Gaps = 2/377 (0%)
Query: 173 HNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRST 232
HN+ +A L M + C+P+ TY +++ + G A N+ + M A + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 233 YNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMK 292
Y+ +I++ + +AL + +M GV P+++T++ ++S N ++S A M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 293 GTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQ 352
I P+ T N +I VK G+ +A L+ M ++ + PDI T++S+I+ + ++ +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDR 380
Query: 353 IENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTS 412
++ K +F M+++ PN+V+YN L+ + E + +F E+ + GL + V+YT+
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 413 LLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDG 472
L++ + +++ A+ VF M + + PN+++Y+ L+D NG L +A+ VF +++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 473 IEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAI 532
+EP I + ++ + G+ + + + ++ +K + + YN+ I + G E+A
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 533 ALYKCMKKRKVMPDSVT 549
AL++ M++ +PDS T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 237/500 (47%), Gaps = 8/500 (1%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
+ D AI LF M + R LP I F ++ + + + + M G+ N+ +
Sbjct: 65 KLDDAIGLFGGMVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
YN L+ + AL++ ++ K G P IV+ +SLLN Y ++ A + + M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
+P+ ++++ LI + +EAV + M Q G +PN+V+ ++ G C R
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRG- 239
Query: 495 NIDA---VLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYT 551
+ID +L E I+ N V Y++ I S + A+ L+ M+ + V P+ +TY+
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 552 VLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMS 611
LIS C R+S+A L +M++ KI ++++I A+ K+G + EAE +++ M
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 612 GCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKV 671
PD+ TY+++++ + + ++A +F M + + P+ + + L+ F K + +
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 672 LLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHL 731
+ + M ++ + + + ++ RD + KQM +I N LL
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 732 LGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
L K+G++E M +F + S E TY+I+++ + AG ++ + G++P
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 792 YGMFRDIVSFAQTRGGAEYA 811
++ ++S +G E A
Sbjct: 540 VIIYNTMISGFCRKGLKEEA 559
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 206/440 (46%), Gaps = 10/440 (2%)
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449
+A+ +F + K+ P I + LL+A + ++ + M+ + NL +Y+ LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 450 DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDI- 508
+ + ++ A+ + +M + G EP+IV++ +LL G C K DAV L +M ++
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN--GYCHGKRISDAVALVDQMVEMG 185
Query: 509 -KLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEAL 567
+ +T+ + + I + +A+AL M +R P+ VTY V+++ C+ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 568 GFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAY 627
L++M KI +YS+VI + K +A ++F M+ G P+VITY++++
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 628 NTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDI---T 684
E W A L +M I P+ + +AL+ AF K G+ + + + M ++ I
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 685 FSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKL 744
F+ S L + K +L+ + +VV+ N L++ K+ RI+ ++L
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT---YNTLINGFCKAKRIDEGVEL 422
Query: 745 FFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQT 804
F ++ G N TY+ L+ A + V + M G+ P+ + ++
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 805 RGGAEYAAIIQERIESLRMK 824
G E A ++ E ++ +M+
Sbjct: 483 NGKLEKAMVVFEYLQRSKME 502
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
LI + I+ ++F M +Q+ Y +I + D A+ +F +M
Sbjct: 406 LINGFCKAKRIDEGVELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
P+ TYN L+ + G+ AM +F+ + R+ + P+ TYN +I G +
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTT 302
+ ++ GV PD++ +N ++S + +A + F M+ PD+ T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 245/541 (45%), Gaps = 38/541 (7%)
Query: 119 VGRFARKNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDK 178
+ + +R F ++K +RG ++ + + F M+ + + IY +I +A +D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMR-ARGITPTSRIYTSLIHAYAVGRDMDE 362
Query: 179 ARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLIN 238
A +M++ + TY+ ++ +AG A FD+ R + S Y +I
Sbjct: 363 ALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIY 422
Query: 239 ACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRP 298
A T N A + ++M E G+ + ++ ++ Y A K L F+ +K P
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 299 DTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKG 358
T+ +I K+G+ KA+++ M+E+ + ++ T++ +I+ + N
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVK--HNLKTYSMMINGFVKLKDWANAFA 540
Query: 359 VFNTMLAEGLKPNIVSYNALMAA-----------------------------------YA 383
VF M+ EG+KP+++ YN +++A YA
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 384 SHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLV 443
G + +L VF+ +++ G P + ++ L+N +Q KA E+ + M + + N
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 444 SYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAA 503
+Y+ ++ Y S G +A E F ++ +G++ +I + LL AC + GR + AV
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 504 EMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRY 563
R+I N+ YN I + G+ +A L + MKK V PD TYT IS+C +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 564 SEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAM 623
+ A ++EM L + + Y+++I +++ L +A S + MK G PD Y +
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 624 L 624
L
Sbjct: 841 L 841
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 195/444 (43%), Gaps = 39/444 (8%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
IY +I H + +++A L EM++ Y+ ++ + + + +F +
Sbjct: 416 IYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL 475
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
P+ TY LIN G +AL+V + M E GV +L T++++++ + +
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
+ A + FE M ++PD +N +I +G D+AI M++ R P TF
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR--PTTRTFM 593
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNAL----------------------- 378
IIH Y+ +G + VF+ M G P + ++N L
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 379 ------------MAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKA 426
M YAS G + +A F ++ GL DI +Y +LL A +S + A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 427 REVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAA 486
V M N+ N Y+ LID + G + EA ++ ++M+++G++P+I + + ++A
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 487 CGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPD 546
C + G + E +K N Y + I + EKA++ Y+ MK + PD
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 547 SVTYTVLISSCCRLSRYSEALGFL 570
Y L++S LSR S A ++
Sbjct: 834 KAVYHCLLTSL--LSRASIAEAYI 855
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/585 (20%), Positives = 252/585 (43%), Gaps = 8/585 (1%)
Query: 229 SRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYF 288
SR + +++ G NW+ + +K+++ P +++ Y +A F
Sbjct: 279 SRKSLQRILDTNGD--NWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETF 332
Query: 289 ELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYS 348
E M+ I P + + +I+ D+A+ M+E+ E +VT++ I+ +S
Sbjct: 333 ERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEM--SLVTYSVIVGGFS 390
Query: 349 VNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIV 408
G E F+ N Y ++ A+ + A ++ E+++ G+ I
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA 450
Query: 409 SYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREM 468
Y ++++ Y K VF ++ P +V+Y LI+ Y G +++A+EV R M
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 469 EQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEY 528
+++G++ N+ + ++ + N AV +K + + YN+ I ++ +G
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
++AI K M+K + P + T+ +I + +L D M T ++ +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I+ ++ + +A + + M ++G S + TYT ++ Y + D KA F ++ +
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTID 708
+ D AL++A K G+ L V + M ++I + ++ ++ + D D
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 709 LIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLL 768
LI+QM+ I + K+G + + ++ + G + N TY+ L+K
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 769 AAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAI 813
A K + + M+ GI+P ++ +++ +R A I
Sbjct: 811 RASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYI 855
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 150/328 (45%), Gaps = 14/328 (4%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
+YN +I +D+A EMQK R +P T+ +I + ++G R ++ +FD M
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
R P+ T+N LIN +A+++ +MT GV + T+ ++ Y +
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLP-DIVTF 340
KA YF ++ + D T+ ++ K G+ A+ + +E + +P + +
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV---TKEMSARNIPRNSFVY 732
Query: 341 TSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKK 400
+I ++ G + + M EG+KP+I +Y + ++A + G A E++
Sbjct: 733 NILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA 792
Query: 401 NGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAE 460
G+ P+I +YT+L+ + R+ P KA + M+ +KP+ Y L+ + S +AE
Sbjct: 793 LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 852
Query: 461 AVEVFREMEQDGIEPNIVSICTLLAACG 488
A I +++IC + G
Sbjct: 853 AY----------IYSGVMTICKEMVEAG 870
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 585 YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEME 644
+ ++ Y ++G + A F M+ G +P YT+++HAY D ++A + +M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 645 TNNIEPDSIACSALMRAFNKGGQP----------------------SKVL---------- 672
IE + S ++ F+K G K++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 673 ----LVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQL 728
LV E M E+ I +I+ M+ +++ D K + + K+++ ++ L
Sbjct: 432 RAEALVRE-MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 729 LHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGI 788
++L K G+I +++ + G + N TYS+++ + +W V + M G+
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 789 QPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMKSGDPSF 830
+P ++ +I+S G + A + ++ LR + +F
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/590 (24%), Positives = 265/590 (44%), Gaps = 47/590 (7%)
Query: 130 LIKEITQRGAINHSNQVFNWM-KNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQK 188
+I + + ++ + ++F + KN++ C YN MI + + D+A L +
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTY--AYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 189 WRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWRE 248
P YN +++ + G+ A+ +F++M + A AP+ STYN LI+ G
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDT 395
Query: 249 ALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIY 308
A ++ M + G+ P++ T NI++ + +A + FE M PD T +I
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 309 CLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGL 368
L K+G+ D A ++ M + S+C + + +TS+I + +G+ E+ ++ M+ +
Sbjct: 456 GLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 369 KPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNA------------ 416
P++ N M G ++ ++F EIK PD SY+ L++
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 417 --YGRSQQPV---------------------KAREVFNMMRINNLKPNLVSYSALIDAYG 453
Y +Q KA ++ M+ +P +V+Y ++ID
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 454 SNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAE---MRDIKL 510
L EA +F E + IE N+V +L+ G+ GR ID L E + +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR---IDEAYLILEELMQKGLTP 690
Query: 511 NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFL 570
N +NS + + + E +A+ ++ MK+ K P+ VTY +LI+ C++ ++++A F
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 571 DEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTA 630
EM + + Y+++IS +K G IAEA ++F+ K +G PD Y AM+ +
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 631 EDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMRE 680
A +LF E + + C L+ +K + +V +RE
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 154/735 (20%), Positives = 311/735 (42%), Gaps = 84/735 (11%)
Query: 94 SVSEVVERVL------ELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVF 147
SV+ +E VL +L+ DV ++ ++ R A + LI + A+NHS+ +
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS---AVNHSDMML 188
Query: 148 NWMKNQK--NYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAH 205
+ + Y ++ +IR A+ ++D A L EM+ D YN I +
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 206 GRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDL 265
G+ G+ A F ++ + P TY ++I EA+++ + + +N P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 266 VTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHS 325
+N ++ Y + ++ +A S E + P +N ++ CL K+G+ D+A+ +F
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 326 MREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASH 385
M++ + P++ T+ +I + G+++ + ++M GL PN+ + N ++
Sbjct: 369 MKKDAA---PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 386 GMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSY 445
EA ++F E+ PD +++ SL++ G+ + A +V+ M ++ + N + Y
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 446 SALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM 505
++LI + ++G + +++++M P
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSP------------------------------ 515
Query: 506 RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSE 565
D++L N+ + GE EK A+++ +K R+ +PD+ +Y++LI + +E
Sbjct: 516 -DLQL----LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 566 ALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLH 625
M + L + Y+ VI + K G + +A + MK G P V+TY +++
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 626 AYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITF 685
+ ++A LF E ++ IE + + S+L+ F K G+ + L+ E + ++ +T
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT- 689
Query: 686 SDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLF 745
P+ + N LL L K+ I + F
Sbjct: 690 -----------------------------PNLYT-----WNSLLDALVKAEEINEALVCF 715
Query: 746 FKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTR 805
+ N TY IL+ L + K Q M+ G++PS + ++S
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 806 GGAEYAAIIQERIES 820
G A + +R ++
Sbjct: 776 GNIAEAGALFDRFKA 790
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/625 (22%), Positives = 267/625 (42%), Gaps = 70/625 (11%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEM 186
F LI+ + G ++ + + + MK+ + A +YN+ I + ++D A F E+
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSS-SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 187 QKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNW 246
+ KPD TY ++I +A + A+ +F+ + + P YN +I GS G +
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 247 REALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIV 306
EA + ++ G P ++ +N +L+ + + +AL FE MK + P+ +T+NI+
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNIL 383
Query: 307 IYCLVKLGQYDKAIDLFHSMR---------------------EKRSE------------C 333
I L + G+ D A +L SM+ +K E C
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
PD +TF S+I G++++ V+ ML + N + Y +L+ + +HG ++
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI---- 449
++ ++ PD+ + ++ ++ +P K R +F ++ P+ SYS LI
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 450 -------------------------------DAYGSNGLLAEAVEVFREMEQDGIEPNIV 478
D + G + +A ++ EM+ G EP +V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 479 SICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCM 538
+ +++ + R + A+ + I+LN V Y+S I + VG ++A + + +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 539 KKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLI 598
++ + P+ T+ L+ + + +EAL M +LK Y +I+ K
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 599 AEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSAL 658
+A + M+ G P I+YT M+ A + +A ALF + N PDS +A+
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 659 MRAFNKGGQPSKVLLVAEFMREQDI 683
+ + G + + E R + +
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/580 (22%), Positives = 248/580 (42%), Gaps = 44/580 (7%)
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTH-NIVLSAYKNGAQY 281
R + +YN+L+ N+ ++ +M+ G GP + T +VL K +
Sbjct: 91 RTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVK-ANKL 149
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
+ ++M+ RP + + +I + D + LF M+E E P + FT
Sbjct: 150 REGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYE--PTVHLFT 207
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKN 401
++I ++ G++++ + + M + L +IV YN + ++ G A F+EI+ N
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 402 GLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEA 461
GL PD V+YTS++ ++ + +A E+F + N P +Y+ +I YGS G EA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMR-DIKLNTVAYNSAIG 520
+ G P++++ +L C R KV+ +A+ + EM+ D N YN I
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILT-CLRKMGKVD-EALKVFEEMKKDAAPNLSTYNILID 385
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
G+ + A L M+K + P+ T +++ C+ + EA +EM D K+
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCT 444
Query: 581 TNQV-YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACAL 639
+++ + S+I K G + +A ++ M S C + I YT+++ + E +
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 640 FLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSL 699
+ +M N PD + M K G+P K FE + A
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEK----------------GRAMFEEIKA--- 545
Query: 700 LRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNT 759
++ P SI L+H L K+G +LF+ + G +
Sbjct: 546 -----------RRFVPDARSYSI-----LIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 760 YSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV 799
Y+I++ G K ++L+ M+ G +P+ + ++
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 212/452 (46%), Gaps = 8/452 (1%)
Query: 164 NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLR 223
N+M+ + ++D+A +F EM C PD T+ +LI G+ G+ A +++ ML
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 224 AAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSK 283
+ + Y +LI + G + K+ K M PDL N + + K
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 284 ALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSI 343
+ FE +K PD +++I+I+ L+K G ++ +LF+SM+E+ C+ D + +
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG--CVLDTRAYNIV 593
Query: 344 IHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGL 403
I + G++ + M +G +P +V+Y +++ A EA +F E K +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 404 CPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVE 463
++V Y+SL++ +G+ + +A + + L PNL ++++L+DA + EA+
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 464 VFREMEQDGIEPNIVSICTLLAACGRCG-RKVNIDAVLLAAEMRD--IKLNTVAYNSAIG 520
F+ M++ PN V+ L+ G C RK N A + EM+ +K +T++Y + I
Sbjct: 714 CFQSMKELKCTPNQVTYGILIN--GLCKVRKFN-KAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
G +A AL+ K +PDS Y +I +R +A +E +P+
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Query: 581 TNQVYSSVISAYSKQGLIAEAESMFNMMKMSG 612
N+ ++ K + +A + +++ +G
Sbjct: 831 HNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 151/349 (43%), Gaps = 40/349 (11%)
Query: 125 KNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARND-IYNMMIRLHARHNQIDKARGLF 183
+++ LI + + G N + ++F MK Q C + YN++I + +++KA L
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQG--CVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 184 FEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGST 243
EM+ +P TY ++I + + A +F++ + + Y++LI+ G
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 244 GNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTH 303
G EA + +++ + G+ P+L T N +L A + ++AL F+ MK P+ T+
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 304 NIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTM 363
I+I L K+ +++KA + M++
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQK----------------------------------- 755
Query: 364 LAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQP 423
+G+KP+ +SY +++ A G EA ++F+ K NG PD Y +++ +
Sbjct: 756 --QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 424 VKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDG 472
+ A +F R L + + L+D N L +A V + + G
Sbjct: 814 MDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 207/454 (45%), Gaps = 2/454 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN++I + +I +A L M+ PD +Y+ +++ + R G+ + + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
R + P+ Y ++I EA + +M G+ PD V + ++ +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A +F M +I PD T+ +I ++G +A LFH M K E PD VTFT
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE--PDSVTFTE 426
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I+ Y G +++ V N M+ G PN+V+Y L+ G A + +E+ K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
L P+I +Y S++N +S +A ++ L + V+Y+ L+DAY +G + +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
E+ +EM G++P IV+ L+ G + + +L + I N +NS + Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
+ A A+YK M R V PD TY L+ C+ EA EM ++
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 583 QVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
YS +I + K+ EA +F+ M+ G + D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 265/569 (46%), Gaps = 13/569 (2%)
Query: 130 LIKEITQRGAINHSN---QVFNWM-KNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFE 185
LI +R +N ++ Q F+ + K++ + ++++ ++ + +AR +F +
Sbjct: 141 LISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEK 200
Query: 186 MQKWRCKPDAETYNALISAHGR-AGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
M + ++ N ++ + + A+ +F + V + ++YN +I+ G
Sbjct: 201 MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHN 304
+EA + M G PD+++++ V++ Y + K E+MK ++P++ +
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 305 IVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTML 364
+I L ++ + +A + F M R LPD V +T++I + G I F M
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEM--IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPV 424
+ + P++++Y A+++ + G EA +F+E+ GL PD V++T L+N Y ++
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 425 KAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLL 484
A V N M PN+V+Y+ LID G L A E+ EM + G++PNI + +++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 485 AACGRCGRKVNI-DAVLLAAEMRDIKLN--TVAYNSAIGSYMNVGEYEKAIALYKCMKKR 541
+ G NI +AV L E LN TV Y + + +Y GE +KA + K M +
Sbjct: 499 NGLCKSG---NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 542 KVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEA 601
+ P VT+ VL++ C + L+ M+ I ++S++ Y + + A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 602 ESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRA 661
+++ M G PD TY ++ + A + ++A LF EM+ S L++
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 662 FNKGGQPSKVLLVAEFMREQDITFSDSIF 690
F K + + V + MR + + IF
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 243/564 (43%), Gaps = 39/564 (6%)
Query: 244 GNWREALKVCKKMTENGVGPDLVTHNIVLSAY-KNGAQYSKALSYFELMKGTNIRPDTTT 302
G REA +V +KM G+ + + N+ L+ K+ + + A+ F + + +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 303 HNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNT 362
+NIVI+ + +LG+ +A L M K PD+++++++++ Y G+++ +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYT--PDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 363 MLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQ 422
M +GLKPN Y +++ EA F+E+ + G+ PD V YT+L++ + +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 423 PVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICT 482
A + F M ++ P++++Y+A+I + G + EA ++F EM G+EP+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD------ 420
Query: 483 LLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRK 542
+V + I Y G + A ++ M +
Sbjct: 421 -----------------------------SVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 543 VMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAE 602
P+ VTYT LI C+ A L EM + + Y+S+++ K G I EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 603 SMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAF 662
+ + +G + D +TYT ++ AY + + +KA + EM ++P + + LM F
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 663 NKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSI 722
G + +M + I + + F +V + + K + K M
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 723 GLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQW 782
L+ K+ ++ LF ++ G + +TYS+L+K L + + EV
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 783 MEDAGIQPSYGMFRDIVSFAQTRG 806
M G+ +F D S + +G
Sbjct: 692 MRREGLAADKEIF-DFFSDTKYKG 714
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 220/501 (43%), Gaps = 37/501 (7%)
Query: 306 VIYCLVKLG-QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTML 364
+I+ L+K+ Y +D F R +R L + +IHL + ++ + + ++
Sbjct: 90 LIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCI---VIHLAVASKDLKVAQSLISSFW 146
Query: 365 AEGLKPNIVS-----YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGR 419
E K N+ ++ L+ Y G VF ++ L +G
Sbjct: 147 -ERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV---------------LVDFGL 190
Query: 420 SQQPVKAREVFNMMRINNLKPNLVSYSALI-----DAYGSNGLLAEAVEVFREMEQDGIE 474
++ AR VF M L ++ S + + D Y + A A+ VFRE + G+
Sbjct: 191 LRE---ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT----ATAIIVFREFPEVGVC 243
Query: 475 PNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIAL 534
N+ S ++ + GR +LL E++ + ++Y++ + Y GE +K L
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 535 YKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSK 594
+ MK++ + P+S Y +I CR+ + +EA EM+ I VY+++I + K
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 595 QGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIA 654
+G I A F M +PDV+TYTA++ + D +A LF EM +EPDS+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 655 CSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQME 714
+ L+ + K G V M + + + + ++ D + +L+ +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 715 PSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWR 774
+I N +++ L KSG IE +KL + ++G A+ TY+ L+ +G
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 775 KYIEVLQWMEDAGIQPSYGMF 795
K E+L+ M G+QP+ F
Sbjct: 544 KAQEILKEMLGKGLQPTIVTF 564
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 178/416 (42%), Gaps = 6/416 (1%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
IY +I L R ++ +A F EM + PD Y LI + G R A F +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
+ P TY +I+ G+ EA K+ +M G+ PD VT +++ Y
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
A M P+ T+ +I L K G D A +L H M + + P+I T+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ--PNIFTYN 495
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKN 401
SI++ +G IE + A GL + V+Y LM AY G +A + E+
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 402 GLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEA 461
GL P IV++ L+N + ++ N M + PN ++++L+ Y L A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAI 519
++++M G+ P+ + L+ G C + +A L EM + ++ Y+ I
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVK--GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 520 GSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMD 575
++ ++ +A ++ M++ + D + + + R + +DE+++
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 248/525 (47%), Gaps = 46/525 (8%)
Query: 175 QIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYN 234
++D A LF +M K R P +N L+SA + ++ +++ + M ++ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 235 NLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT 294
IN AL V KM + G PD+VT + +L+ Y + + S A++ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 295 NIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIE 354
+PDT T +I+ L + +A+ L M ++ C PD+VT+ ++++ G I+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDID 240
Query: 355 NCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLL 414
+ N M A +K N+V +N ++ + + + A+ +F E++ G+ P++V+Y SL+
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 415 NA---YGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQD 471
N YGR +R + NM+ + PN+V+++ALIDA+ G L EA ++ EM Q
Sbjct: 301 NCLCNYGRWSDA--SRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 472 GIEPNIVSICTLLAA-C--------------------------------GRCGRKVNIDA 498
I+P+ ++ L+ C G C K D
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 499 VLLAAEM--RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISS 556
V L EM R + NTV Y + I + G+ + A ++K M +V D +TY++L+
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 557 CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
C + AL + ++ L +Y+++I K G + EA +F + + PD
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---KPD 534
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRA 661
V+TY M+ + ++A LF +M+ + P+S + L+RA
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/580 (23%), Positives = 265/580 (45%), Gaps = 29/580 (5%)
Query: 232 TYNNLINACGS----------TGNWREALK--------------VCKKMTENGVGPDLVT 267
T + N CGS +G++RE L+ + M ++ P +V
Sbjct: 26 TVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE 85
Query: 268 HNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMR 327
N +LSA ++ +S E M+ I D T++I I C + Q A+ + M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 328 EKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGM 387
+ E PDIVT +S+++ Y + +I + + + M+ G KP+ ++ L+ H
Sbjct: 146 KLGYE--PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 388 SKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSA 447
+ EA+++ +++ + G PD+V+Y +++N + A + N M +K N+V ++
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 448 LIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRD 507
+ID+ + AV++F EME GI PN+V+ +L+ GR + +L +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 508 IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEAL 567
I N V +N+ I ++ G+ +A L++ M +R + PD++TY +LI+ C +R EA
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 568 GFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAY 627
M+ Q Y+++I+ + K + + +F M G + +TYT ++ +
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 628 NTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSD 687
A D + A +F +M +N + D + S L+ G+ L++ +++++ ++ +
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 688 SIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFK 747
I+ M+ DL + VV+ N ++ L ++ LF K
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT---YNTMISGLCSKRLLQEADDLFRK 560
Query: 748 IVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAG 787
+ G N TY+ L++ L + E+++ M +G
Sbjct: 561 MKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 200/378 (52%), Gaps = 10/378 (2%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
++ + +RG I+ + + N M+ + A I+N +I ++ ++ A LF EM+
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
+P+ TYN+LI+ G+W A + +ML + P+ T+N LI+A G EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
K+ ++M + + PD +T+N++++ + + +A F+ M + P+ T+N +I
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 310 LVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLK 369
K + + ++LF M ++ + + VT+T+II + G ++ + VF M++ +
Sbjct: 408 FCKCKRVEDGVELFREMSQR--GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREV 429
+I++Y+ L+ S+G AL +F ++K+ + +I Y +++ ++ + +A ++
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 430 FNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGR 489
F + I KP++V+Y+ +I S LL EA ++FR+M++DG PN + TL+ A R
Sbjct: 526 FCSLSI---KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 490 -CGRKVNIDAVLLAAEMR 506
C R + + L EMR
Sbjct: 583 DCDRAASAE---LIKEMR 597
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 214/478 (44%), Gaps = 43/478 (8%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
+ D A+DLF M + R P IV F ++ + + E + M G+ ++ +
Sbjct: 63 KVDDAVDLFGDMVKSRP--FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
Y+ + + AL+V ++ K G PDIV+ +SLLN Y S++ A + + M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
KP+ +++ LI + +EAV + +M Q G +P++V+ T++ G C R
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN--GLCKRG- 237
Query: 495 NIDA---VLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYT 551
+ID +L E IK N V +N+ I S E A+ L+ M+ + + P+ VTY
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 552 VLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMS 611
LI+ C R+S+A L M++ KI ++++I A+ K+G + EAE + M
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 612 GCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKV 671
PD ITY +++ + ++A +F M + + P+ + L+ F K
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK------- 410
Query: 672 LLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHL 731
C + D ++L ++M V + ++
Sbjct: 411 -------------------------CKRVEDG---VELFREMSQRGLVGNTVTYTTIIQG 442
Query: 732 LGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQ 789
++G +S +F ++VS+ + TYSILL L + G + + ++++ + ++
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 130/317 (41%), Gaps = 40/317 (12%)
Query: 513 VAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDE 572
V +N + + + ++E I+L + M+ + D TY++ I+ CR S+ S AL L +
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 573 MMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAED 632
MM L SS+++ Y I++A ++ + M G PD T+T ++H
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 633 WEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFE 692
+A AL +M +PD + ++ K G
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG-------------------------- 237
Query: 693 MVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSG 752
D ++L+ +ME + ++ + N ++ L K +E + LF ++ + G
Sbjct: 238 ---------DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 753 AEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV-SFAQTRGGAEYA 811
N TY+ L+ L G W +L M + I P+ F ++ +F + E
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 812 AIIQERIESLRMKSGDP 828
+ +E I+ +S DP
Sbjct: 349 KLHEEMIQ----RSIDP 361
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 35/228 (15%)
Query: 598 IAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSA 657
+ +A +F M S P ++ + +L A +E +L +M+T I D S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 658 LMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSF 717
+ F + Q S L V M M L EP
Sbjct: 124 FINCFCRRSQLSLALAVLAKM--------------MKLG----------------YEPDI 153
Query: 718 HVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYI 777
+S LLN H S RI + L ++V G + + T++ L+ L + +
Sbjct: 154 VTLS-SLLNGYCH----SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 778 EVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMKS 825
++ M G QP + +V+ RG + A + ++E+ R+K+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 255/530 (48%), Gaps = 8/530 (1%)
Query: 145 QVFNWMKNQKNYCARN-DIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALIS 203
VF+ + + +N C +++ + + +++A F +M+++R P + N L+
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 204 AHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGP 263
+ G+ F DM+ A P+ TYN +I+ G+ A + ++M G+ P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 264 DLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLF 323
D VT+N ++ + + + +FE MK PD T+N +I C K G+ ++ +
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355
Query: 324 HSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYA 383
M+ + P++V++++++ + G ++ + M GL PN +Y +L+ A
Sbjct: 356 REMKGNGLK--PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 413
Query: 384 SHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLV 443
G +A + NE+ + G+ ++V+YT+L++ +++ +A E+F M + PNL
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 444 SYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAA 503
SY+ALI + + A+E+ E++ GI+P+++ T + G C + A ++
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW--GLCSLEKIEAAKVVMN 531
Query: 504 EMRD--IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLS 561
EM++ IK N++ Y + + +Y G + + L MK+ + VT+ VLI C+
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 562 RYSEALGFLDEMM-DLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITY 620
S+A+ + + + D + +++++I K + A ++F M G PD Y
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 621 TAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSK 670
T+++ + +A AL +M ++ D +A ++L+ + Q K
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQK 701
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 234/493 (47%), Gaps = 9/493 (1%)
Query: 140 INHSNQVFNWMKNQKNYCARNDI--YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAET 197
+ ++ V + K+ AR + YN+MI + ++ ARGLF EM+ PD T
Sbjct: 240 LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVT 299
Query: 198 YNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMT 257
YN++I G+ G+ + F++M P TYN LIN G L+ ++M
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 258 ENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYD 317
NG+ P++V+++ ++ A+ +A+ ++ M+ + P+ T+ +I K+G
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 318 KAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNA 377
A L + M + E ++VT+T++I +++ + +F M G+ PN+ SYNA
Sbjct: 420 DAFRLGNEMLQVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 378 LMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINN 437
L+ + AL + NE+K G+ PD++ Y + + ++ A+ V N M+
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 438 LKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNID 497
+K N + Y+ L+DAY +G E + + EM++ IE +V+ C L+ G C K+
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID--GLCKNKLVSK 595
Query: 498 AVLLAAEMRD---IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLI 554
AV + + ++ N + + I + E A L++ M ++ ++PD YT L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 555 SSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCS 614
+ EAL D+M ++ + L Y+S++ S + +A S M G
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 615 PDVITYTAMLHAY 627
PD + ++L +
Sbjct: 716 PDEVLCISVLKKH 728
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 227/534 (42%), Gaps = 38/534 (7%)
Query: 257 TENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQY 316
T N P + + S + +A+ F MK + P T + N +++ KLG+
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 317 DKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYN 376
D F M + P + T+ +I G +E +G+F M GL P+ V+YN
Sbjct: 244 DDVKRFFKDMIGAGAR--PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 377 ALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRIN 436
+++ + G + + F E+K PD+++Y +L+N + + + E + M+ N
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 437 NLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNI 496
LKPN+VSYS L+DA+ G++ +A++ + +M + G+ P
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP--------------------- 400
Query: 497 DAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISS 556
N Y S I + +G A L M + V + VTYT LI
Sbjct: 401 --------------NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 557 CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
C R EA +M + Y+++I + K + A + N +K G PD
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAE 676
++ Y + + E E A + EM+ I+ +S+ + LM A+ K G P++ L + +
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 677 FMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHV-VSIGLLNQLLHLLGKS 735
M+E DI + F ++ + +D ++ F + + + ++ L K
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 736 GRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQ 789
++E+ LF ++V G + Y+ L+ GN + + + M + G++
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 1/302 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y +I ++ +A LF +M P+ +YNALI +A A+ + +++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ P Y I S A V +M E G+ + + + ++ AY +
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+ L + MK +I T ++I L K KA+D F+ + + FT+
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG-LQANAAIFTA 618
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I + Q+E +F M+ +GL P+ +Y +LM G EAL++ +++ + G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ D+++YTSL+ Q KAR M + P+ V +++ + G + EAV
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
Query: 463 EV 464
E+
Sbjct: 739 EL 740
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 238/491 (48%), Gaps = 6/491 (1%)
Query: 164 NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLR 223
++MI R ++ A ++ K +P+ T++ LI+ G+ A+ + D M+
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 224 AAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSK 283
P T N L+N +G EA+ + KM E G P+ VT+ VL+ Q +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 284 ALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSI 343
A+ M+ NI+ D ++I+I L K G D A +LF+ M K +I+T+ +
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT--TNIITYNIL 304
Query: 344 IHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGL 403
I + G+ ++ + M+ + PN+V+++ L+ ++ G +EA + E+ G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 404 CPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVE 463
PD ++YTSL++ + + KA ++ ++M PN+ +++ LI+ Y + + +E
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 464 VFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIGS 521
+FR+M G+ + V+ TL+ G K+N+ A L EM R + N V Y +
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELG-KLNV-AKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 522 YMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLT 581
+ GE EKA+ +++ ++K K+ D Y ++I C S+ +A + +
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 582 NQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFL 641
+ Y+ +I K+G ++EAE +F M+ G +PD TY ++ A+ D K+ L
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 642 EMETNNIEPDS 652
E++ D+
Sbjct: 603 ELKRCGFSVDA 613
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/579 (24%), Positives = 258/579 (44%), Gaps = 47/579 (8%)
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A+++F DM+ + P+ ++ L +A T + L +CK+M G+ +L T +I+++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
+ + A S + ++KLG Y+
Sbjct: 132 CFCRCRKLCLAFS-------------------AMGKIIKLG-YE---------------- 155
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
P+ +TF+++I+ + G++ + + M+ G KP++++ N L+ G EA+
Sbjct: 156 -PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYG 453
+ +++ + G P+ V+Y +LN +S Q A E+ M N+K + V YS +ID
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 454 SNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTV 513
+G L A +F EME GI NI++ L+ GR + +L R I N V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 514 AYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEM 573
++ I S++ G+ +A L+K M R + PD++TYT LI C+ + +A +D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 574 MDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDW 633
+ + ++ +I+ Y K I + +F M + G D +TY ++ +
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 634 EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMR----EQDITFSDSI 689
A LF EM + + P+ + L+ G+ K L + E + E DI + I
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 690 FFEMVLACSLLRDWKTTIDL-IKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKI 748
M A + W L +K ++P +I ++ L K G + LF K+
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI-----MIGGLCKKGPLSEAELLFRKM 569
Query: 749 VSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAG 787
G + TY+IL++ L G+ K +++++ ++ G
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 161/314 (51%), Gaps = 2/314 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y+++I +H +D A LF EM+ + TYN LI AG+W + DM+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ + P+ T++ LI++ G REA ++ K+M G+ PD +T+ ++ +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
KA +LM P+ T NI+I K + D ++LF M + + D VT+ +
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR--GVVADTVTYNT 443
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I + G++ K +F M++ + PNIV+Y L+ +G S++AL +F +I+K+
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ DI Y +++ + + A ++F + + +KP + +Y+ +I G L+EA
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 463 EVFREMEQDGIEPN 476
+FR+ME+DG P+
Sbjct: 564 LLFRKMEEDGHAPD 577
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 213/483 (44%), Gaps = 37/483 (7%)
Query: 317 DKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYN 376
D AIDLF M R LP ++ F+ + + Q + + M +G+ N+ + +
Sbjct: 70 DDAIDLFRDMIHSRP--LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 377 ALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRIN 436
++ + A S +I K G P+ +++++L+N + +A E+ + M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 437 NLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNI 496
KP+L++ + L++ +G AEA+ + +M + G +PN V+ +L + G+
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 497 DAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISS 556
+L E R+IKL+ V Y+ I G + A L+ M+ + + + +TY +LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 557 CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
C R+ + L +M+ KI +S +I ++ K+G + EAE + M G +PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAE 676
ITYT+++ + +KA + M + +P+ +R FN +L+
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN-------IRTFN--------ILING 412
Query: 677 FMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSG 736
+ + I ++L ++M V N L+ + G
Sbjct: 413 YCKANRI--------------------DDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 737 RIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFR 796
++ +LF ++VS N TY ILL L G K +E+ + +E + ++ G++
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 797 DIV 799
I+
Sbjct: 513 III 515
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 213/472 (45%), Gaps = 47/472 (9%)
Query: 359 VFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYG 418
+F M+ P ++ ++ L +A A L++ +++ G+ ++ + + ++N +
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 419 RSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIV 478
R ++ A + +PN +++S LI+ G ++EA+E+ M + G +P+++
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 479 SICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCM 538
+I TL+ G C +A+LL +M + Y C
Sbjct: 195 TINTLVN--GLCLSGKEAEAMLLIDKMVE---------------------------YGCQ 225
Query: 539 KKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLI 598
P++VTY +++ C+ + + A+ L +M + I L YS +I K G +
Sbjct: 226 ------PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 599 AEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSAL 658
A ++FN M+M G + ++ITY ++ + A W+ L +M I P+ + S L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 659 MRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLA--C--SLLRDWKTTIDLI--KQ 712
+ +F K G+ + + + M + I D+I + ++ C + L +DL+ K
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIA-PDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 713 MEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGN 772
+P+ +I L++ K+ RI+ ++LF K+ G A+ TY+ L++ G
Sbjct: 399 CDPNIRTFNI-----LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 773 WRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMK 824
E+ Q M + P+ ++ ++ G +E A I E+IE +M+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 121/278 (43%), Gaps = 5/278 (1%)
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+ AI L++ M + +P + ++ L S+ + +Y L +M I S +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I+ + + + A S + G P+ IT++ +++ +A L M
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTI- 707
+PD I + L+ G+ ++ +L+ + M E +++ + VL + + +T +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQ-PNAVTYGPVLN-VMCKSGQTALA 247
Query: 708 -DLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKN 766
+L+++ME + + ++ L K G +++ LF ++ G N TY+IL+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 767 LLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIV-SFAQ 803
AG W ++L+ M I P+ F ++ SF +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
IYN++I +++D A LF + KP +TYN +I + G A +F M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNG 278
AP TYN LI A G+ +++K+ +++ G D T +V+ +G
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 228/475 (48%), Gaps = 4/475 (0%)
Query: 144 NQVFNWMKNQKNYCARNDIY--NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNAL 201
N V ++ K + ++IY N+MI R + A + ++ K +PD T+N L
Sbjct: 105 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 164
Query: 202 ISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGV 261
I G+ A+ + D M+ P TYN+++N +G+ AL + +KM E V
Sbjct: 165 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 262 GPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAID 321
D+ T++ ++ + A+S F+ M+ I+ T+N ++ L K G+++
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 322 LFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAA 381
L M + E +P+++TF ++ ++ G+++ ++ M+ G+ PNI++YN LM
Sbjct: 285 LLKDMVSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 382 YASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPN 441
Y EA ++ + + +N PDIV++TSL+ Y ++ +VF + L N
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Query: 442 LVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLL 501
V+YS L+ + +G + A E+F+EM G+ P++++ LL G+ +
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 502 AAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLS 561
+ + L V Y + I G+ E A L+ + + V P+ +TYTV+IS C+
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 562 RYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
SEA L +M + + Y+++I A+ + G + + + MK G S D
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 219/471 (46%), Gaps = 37/471 (7%)
Query: 197 TYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKM 256
T N +I+ R + +A ++ +++ P +T+N LI G EA+ + +M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 257 TENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQY 316
ENG PD+VT+N +++ S AL M+ N++ D T++ +I L + G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 317 DKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYN 376
D AI LF M K + +VT+ S++ G+ + + M++ + PN++++N
Sbjct: 245 DAAISLFKEMETKGIK--SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 377 ALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRIN 436
L+ + G +EA ++ E+ G+ P+I++Y +L++ Y + +A + ++M N
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 437 NLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNI 496
P++V++++LI Y + + ++VFR + + G+ N V+
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT----------------- 405
Query: 497 DAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISS 556
Y+ + + G+ + A L++ M V+PD +TY +L+
Sbjct: 406 ------------------YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 557 CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
C + +AL +++ K+ L +Y+++I K G + +A ++F + G P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQ 667
V+TYT M+ +A L +ME + P+ + L+RA + G
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 143/625 (22%), Positives = 260/625 (41%), Gaps = 120/625 (19%)
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A+ +F +M+R+ PS ++ +A T + L CK++ NG+ HNI
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA-----HNIY-- 124
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
T NI+I C + + C
Sbjct: 125 ----------------------------TLNIMINCFCRCCK----------------TC 140
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
YSV G++ + G +P+ ++N L+ G EA+
Sbjct: 141 FA-----------YSVLGKV----------MKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYG 453
+ + + +NG PD+V+Y S++N RS A ++ M N+K ++ +YS +ID+
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 454 SNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLN 511
+G + A+ +F+EME GI+ ++V+ +L+ + G K N D LL +M R+I N
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG-KWN-DGALLLKDMVSREIVPN 297
Query: 512 TVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLD 571
+ +N + ++ G+ ++A LYK M R + P+ +TY L+ C +R SEA LD
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 572 EMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAE 631
M+ K ++S+I Y + + +F + G + +TY+ ++ + +
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 632 DWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFF 691
+ A LF EM ++ + PD + L+ G+ K L + E ++
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ------------ 465
Query: 692 EMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSS 751
K+ +DL I + ++ + K G++E LF +
Sbjct: 466 ------------KSKMDL-----------GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 752 GAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGG--AE 809
G + N TY++++ L G+ + +L+ ME+ G P+ + ++ A R G
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR-AHLRDGDLTA 561
Query: 810 YAAIIQERIESLRMKSGDPSFDQQS 834
A +I+E MKS S D S
Sbjct: 562 SAKLIEE------MKSCGFSADASS 580
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDI--YNMMIRLHARHNQIDKARGLFF 184
+ L++ Q G I + ++F M + D+ Y +++ + +++KA +F
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHG---VLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 185 EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
++QK + Y +I + G+ A N+F + V P+ TY +I+ G
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHN 304
+ EA + +KM E+G P+ T+N ++ A+ + + E MK D ++
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582
Query: 305 IVIYCLVKLGQYDKA 319
+VI L+ G+ DK+
Sbjct: 583 MVIDMLLS-GELDKS 596
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 110/283 (38%), Gaps = 35/283 (12%)
Query: 529 EKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSV 588
+ AIAL++ M + + +P V ++ S+ R +++ L F ++ I + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 589 ISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
I+ + + A S+ + G PD T+ ++ +A L M N
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 649 EPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTID 708
+PD + ++++ + G S L D
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLAL-----------------------------------D 214
Query: 709 LIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLL 768
L+++ME + + ++ L + G I++ + LF ++ + G +++ TY+ L++ L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 769 AAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYA 811
AG W +L+ M I P+ F ++ G + A
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 153/655 (23%), Positives = 284/655 (43%), Gaps = 47/655 (7%)
Query: 140 INHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYN 199
++ S ++F+W +Q Y D+Y ++I + + L +M+ +
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150
Query: 200 ALISAHGRAGQWRWAMNIFDDMLRA-AVAPSRSTYNNLINACGSTGNWREALKVCKKMTE 258
+++ + +AG + +M + P+ +YN ++ S + A V M
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 259 NGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDK 318
+ P L T +V+ A+ + ALS M P++ + +I+ L K + ++
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 319 AIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNAL 378
A+ L M C+PD TF +I +I + N ML G P+ ++Y L
Sbjct: 271 ALQLLEEMF--LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 379 MAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVF-NMMRINN 437
M G A +F I K P+IV + +L++ + + A+ V +M+
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 438 LKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNID 497
+ P++ +Y++LI Y GL+ A+EV +M G +PN+ S L+ + G+
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 498 AVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSC 557
VL +K NTV +N I ++ +A+ +++ M ++ PD T+ LIS
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 558 CRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDV 617
C + AL L +M+ + Y+++I+A+ ++G I EA + N M G D
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 618 ITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEF 677
ITY +++ A + +KA +LF +M + P +I+C+ L+ + G
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG----------- 613
Query: 678 MREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGR 737
M E+ + F EMVL S T D++ N L++ L ++GR
Sbjct: 614 MVEEAVEFQK----EMVLRGS-------TPDIVT-------------FNSLINGLCRAGR 649
Query: 738 IESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSY 792
IE + +F K+ + G + T++ L+ L G ++ + D GI+ +
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG----FVYDACLLLDEGIEDGF 700
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 173/453 (38%), Gaps = 77/453 (16%)
Query: 367 GLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKA 426
G + + Y L+ ++G K + ++K G+ + S++ Y ++ P +
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 427 -REVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLA 485
R + M + + +P SY+ +++ S A VF +M I P + + ++
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 486 ACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMP 545
A + V E + A++L + M K +P
Sbjct: 226 A-----------------------------------FCAVNEIDSALSLLRDMTKHGCVP 250
Query: 546 DSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMF 605
+SV Y LI S + +R +EAL L+EM + + ++ VI K I EA M
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 606 NMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKG 665
N M + G +PD ITY +++ + A LF + +P+ + + L+ F
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTH 366
Query: 666 GQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVV-SIGL 724
G+ L D K ++ M S+ +V +
Sbjct: 367 GR--------------------------------LDDAKA---VLSDMVTSYGIVPDVCT 391
Query: 725 LNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWME 784
N L++ K G + +++ + + G + N +Y+IL+ G + VL M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 785 DAGIQPSYGMFRDIVS-FAQTRGGAEYAAIIQE 816
G++P+ F ++S F + E I +E
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/592 (22%), Positives = 274/592 (46%), Gaps = 47/592 (7%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEM 186
+ +++ +++ +NH +++ +++Q+ C D+ +I+ + +++ D+A +F M
Sbjct: 46 YHHILRRLSETRMVNHVSRIVELIRSQECKCDE-DVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 187 QK-WRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLI-------- 237
++ + C+P +YN L++A A QW ++F A VAP+ TYN LI
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 238 ---------------------------NACGSTGNWREALKVCKKMTENGVGPDLVTHNI 270
N G +AL++ +M+E GV PD+ +NI
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNI 224
Query: 271 VLSAYKNGAQYSKALSYFE-LMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREK 329
++ + + A+ ++ L++ +++ P+ THNI+I L K G+ D + ++ M++
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 330 RSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389
E D+ T++S+IH G ++ + VFN + ++V+YN ++ + G K
Sbjct: 285 ERE--KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342
Query: 390 EALSVFNEIK-KNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSAL 448
E+L ++ ++ KN + +IVSY L+ + + +A ++ +M + +Y
Sbjct: 343 ESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 449 IDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--R 506
I NG + +A+ V +E+E G ++ + +++ C +K +A L EM
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL--CKKKRLEEASNLVKEMSKH 458
Query: 507 DIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEA 566
++LN+ N+ IG + +A + M K P V+Y +LI C+ ++ EA
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 567 LGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA 626
F+ EM++ + YS ++ + I A +++ SG DV+ + ++H
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 627 YNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFM 678
+ + A + ME N + + + LM F K G ++ ++ +M
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/564 (21%), Positives = 255/564 (45%), Gaps = 15/564 (2%)
Query: 248 EALKVCKKMTE-NGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIV 306
+AL V K+M E G P + ++N +L+A+ Q+ K S F + + P+ T+N++
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 307 IYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAE 366
I K +++KA M ++ + PD+ +++++I+ + G++++ +F+ M
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFK--PDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 367 GLKPNIVSYNALMAAYASHGMSKEALSVFNEI-KKNGLCPDIVSYTSLLNAYGRSQQPVK 425
G+ P++ YN L+ + K A+ +++ + + + + P++ ++ +++ + +
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 426 AREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLA 485
+++ M+ N + +L +YS+LI G + +A VF E+++ ++V+ T+L
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 486 ACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMP 545
RCG+ + E ++ +N V+YN I + G+ ++A +++ M +
Sbjct: 334 GFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 546 DSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMF 605
D TY + I C ++ALG + E+ L Y+S+I K+ + EA ++
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 606 NMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKG 665
M G + A++ +A EM N P ++ + L+ K
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 666 GQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKT--TIDLIKQMEPSFHVVSIG 723
G+ + + M E + + +L C L RD K ++L Q S +
Sbjct: 513 GKFGEASAFVKEMLENG--WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 724 LLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWM 783
+ N L+H L G+++ M + + AN TY+ L++ G+ + + +M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Query: 784 EDAGIQPSYGMFRDIVSFAQTRGG 807
G+QP DI+S+ G
Sbjct: 631 YKMGLQP------DIISYNTIMKG 648
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 192/429 (44%), Gaps = 3/429 (0%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
+N+MI ++ ++D ++ M++ + D TY++LI AG A ++F+++
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ TYN ++ G +E+L++ + M E+ ++V++NI++ +
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKID 376
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+A + LM D TT+ I I+ L G +KA+ + + D+ + S
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL--DVYAYAS 434
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
II ++E + M G++ N NAL+ EA E+ KNG
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
P +VSY L+ ++ + +A M N KP+L +YS L+ + + A+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
E++ + Q G+E +++ L+ G+ + V+ E R+ N V YN+ + +
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTN 582
VG+ +A ++ M K + PD ++Y ++ C S A+ F D+ + I T
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674
Query: 583 QVYSSVISA 591
++ ++ A
Sbjct: 675 YTWNILVRA 683
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 150/326 (46%), Gaps = 3/326 (0%)
Query: 126 NFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFE 185
++ LIK + + G I+ + ++ M K Y A Y + I + ++KA G+ E
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMP-AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 186 MQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGN 245
++ D Y ++I + + A N+ +M + V + N LI
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 246 WREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNI 305
EA ++M +NG P +V++NI++ ++ +A ++ + M +PD T++I
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 306 VIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLA 365
++ L + + D A++L+H + E D++ +IH G++++ V M
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLE--TDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 366 EGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVK 425
N+V+YN LM + G S A ++ + K GL PDI+SY +++ +
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 426 AREVFNMMRINNLKPNLVSYSALIDA 451
A E F+ R + + P + +++ L+ A
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 178/421 (42%), Gaps = 4/421 (0%)
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKN-GLCPDIVSYTSLLNAYGRSQQPVKARE 428
P +S ++ S + A ++F+ ++ G V Y +L ++
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 429 VFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREM-EQDGIEPNIVSICTLLAAC 487
+ ++R K + ++I YG N + +A++VF+ M E G EP I S TLL A
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 488 GRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDS 547
+ V ++++ E + N YN I E+EKA M K PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 548 VTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFN- 606
+Y+ +I+ + + +AL DEM + + Y+ +I + K+ A +++
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 607 MMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGG 666
+++ S P+V T+ M+ + + ++ M+ N E D S+L+ G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 667 QPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLN 726
K V + E+ + + M+ K +++L + ME + V+I N
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK-NSVNIVSYN 363
Query: 727 QLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDA 786
L+ L ++G+I+ ++ + + G A+ TY I + L G K + V+Q +E +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 787 G 787
G
Sbjct: 424 G 424
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y++++ R +ID A L+ + + + D +N LI G+ AM + +M
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ TYN L+ G+ A + M + G+ PD++++N ++ S
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLV 311
A+ +F+ + I P T NI++ +V
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 37.4 bits (85), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 49/116 (42%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
++N++I ++D A + M+ C + TYN L+ + G A I+ M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKN 277
+ + P +YN ++ A++ +G+ P + T NI++ A N
Sbjct: 631 YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 219/437 (50%), Gaps = 6/437 (1%)
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A+++F DM+++ PS +N L++A + + + KKM G+ DL T NIV++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
+ Q S ALS M PD T ++ + + A+ L M E +
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK- 187
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
PDIV + +II ++ + F + +G++PN+V+Y AL+ + +A
Sbjct: 188 -PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYG 453
+ +++ K + P++++Y++LL+A+ ++ + ++A+E+F M ++ P++V+YS+LI+
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 454 SNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLN 511
+ + EA ++F M G ++VS TL+ G C K D + L EM R + N
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLIN--GFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 512 TVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLD 571
TV YN+ I + G+ +KA + M + PD TY +L+ C +AL +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 572 EMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAE 631
+M ++ L Y++VI K G + EA S+F + + G PD++TYT M+ T
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 632 DWEKACALFLEMETNNI 648
+ AL+ +M+ +
Sbjct: 485 LLHEVEALYTKMKQEGL 501
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 231/482 (47%), Gaps = 31/482 (6%)
Query: 248 EALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVI 307
+A+ + M ++ P +V N +LSA +Y +S + M+ IR D T NIVI
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 308 YCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEG 367
C Q A+ + M + E PD VT S+++ + ++ + + + M+ G
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYE--PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 368 LKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAR 427
KP+IV+YNA++ + +A F EI++ G+ P++V+YT+L+N S + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 428 EVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAAC 487
+ + M + PN+++YSAL+DA+ NG + EA E+F EM + I+P+IV+ +L+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN-- 303
Query: 488 GRCGRKVNIDAVLLAAEMRDIKL------NTVAYNSAIGSYMNVGEYEKAIALYKCMKKR 541
G C D + A +M D+ + + V+YN+ I + E + L++ M +R
Sbjct: 304 GLCLH----DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 542 KVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEA 601
++ ++VTY LI + +A F +M I Y+ ++ G + +A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 602 ESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRA 661
+F M+ D++TYT ++ E+A +LF + ++PD + + +M
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 662 FNKGGQPSKVLLVAEFMREQ------------DITFSDSIFFEMVLAC----SLLRDWKT 705
G +V + M+++ DIT S + +M L+C SLL+D K+
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKM-LSCGYAPSLLKDIKS 538
Query: 706 TI 707
+
Sbjct: 539 GV 540
Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 208/421 (49%), Gaps = 7/421 (1%)
Query: 140 INHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYN 199
+N + +F+ M + + + D +N ++ + + D L +M+ + D T+N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 200 ALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTEN 259
+I+ Q A++I ML+ P R T +L+N +A+ + KM E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 260 GVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKA 319
G PD+V +N ++ + + + A +F+ ++ IRP+ T+ ++ L ++ A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 320 IDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALM 379
L M +K+ P+++T+++++ + NG++ K +F M+ + P+IV+Y++L+
Sbjct: 245 ARLLSDMIKKKIT--PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 380 AAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLK 439
H EA +F+ + G D+VSY +L+N + ++++ ++F M L
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 440 PNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAV 499
N V+Y+ LI + G + +A E F +M+ GI P+I + LL G C A+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG--GLCDNGELEKAL 420
Query: 500 LLAAEM--RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSC 557
++ +M R++ L+ V Y + I G+ E+A +L+ + + + PD VTYT ++S
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 558 C 558
C
Sbjct: 481 C 481
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 201/395 (50%), Gaps = 4/395 (1%)
Query: 159 RNDIY--NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMN 216
RND+Y N++I Q+ A + +M K +PD T +L++ R + A++
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 217 IFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYK 276
+ D M+ P YN +I++ T +A K++ G+ P++VT+ +++
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 277 NGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPD 336
N +++S A M I P+ T++ ++ VK G+ +A +LF M R PD
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM--VRMSIDPD 294
Query: 337 IVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFN 396
IVT++S+I+ ++ +I+ +F+ M+++G ++VSYN L+ + ++ + +F
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 397 EIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNG 456
E+ + GL + V+Y +L+ + ++ KA+E F+ M + P++ +Y+ L+ NG
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 457 LLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYN 516
L +A+ +F +M++ ++ +IV+ T++ + G+ ++ + ++ +K + V Y
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 517 SAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYT 551
+ + G + ALY MK+ +M + T +
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 200/460 (43%), Gaps = 43/460 (9%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
+ + AIDLF M + R P IV F ++ + + + M G++ ++ +
Sbjct: 65 KLNDAIDLFSDMVKSRP--FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
+N ++ + ALS+ ++ K G PD V+ SL+N + R + A + + M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
KP++V+Y+A+ID+ + +A + F+E+E+ GI PN+V+
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT--------------- 227
Query: 495 NIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLI 554
Y + + N + A L M K+K+ P+ +TY+ L+
Sbjct: 228 --------------------YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 555 SSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCS 614
+ + + EA +EM+ + I YSS+I+ I EA MF++M GC
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 615 PDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLV 674
DV++Y +++ + A+ E LF EM + +++ + L++ F + G K
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK---A 384
Query: 675 AEFMREQD-ITFSDSIFFEMVLACSLLR--DWKTTIDLIKQMEPSFHVVSIGLLNQLLHL 731
EF + D S I+ +L L + + + + + M+ + I ++
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 732 LGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAG 771
+ K+G++E LF + G + + TY+ ++ L G
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 172/373 (46%), Gaps = 14/373 (3%)
Query: 458 LAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNS 517
L +A+++F +M + P+IV LL+A + + + ++ E+ I+ + +N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 518 AIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLK 577
I + + A+++ M K PD VT L++ CR +R S+A+ +D+M+++
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 578 IPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKAC 637
Y+++I + K + +A F ++ G P+V+TYTA+++ + W A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 638 ALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLAC 697
L +M I P+ I SAL+ AF K G KVL E E SI ++V
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNG---KVLEAKELFEEM---VRMSIDPDIVTYS 299
Query: 698 SLLRDWKTTIDLIKQMEPSFHV-VSIGLL------NQLLHLLGKSGRIESMMKLFFKIVS 750
SL+ D I + F + VS G L N L++ K+ R+E MKLF ++
Sbjct: 300 SLINGL-CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 751 SGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEY 810
G +N TY+ L++ AG+ K E M+ GI P + ++ G E
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 811 AAIIQERIESLRM 823
A +I E ++ M
Sbjct: 419 ALVIFEDMQKREM 431
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 229/475 (48%), Gaps = 15/475 (3%)
Query: 149 WMKNQKNY--CARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHG 206
W++ +Y RN ++N+ Q + A LF M R P + L+S
Sbjct: 44 WIRAFSSYRKILRNGLHNL---------QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIA 94
Query: 207 RAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINA-CGSTGNWREALKVCKKMTENGVGPDL 265
+ ++ +++F+ M + P T N +++ C S+ R + + KM + G PDL
Sbjct: 95 KMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL-GKMMKLGFEPDL 153
Query: 266 VTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHS 325
VT +L+ Y + + A++ F+ + G +P+ T+ +I CL K + A++LF+
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 326 MREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASH 385
M S P++VT+ +++ G+ + + M+ ++PN++++ AL+ A+
Sbjct: 214 MGTNGSR--PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 386 GMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSY 445
G EA ++N + + + PD+ +Y SL+N +AR++F +M N PN V Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 446 SALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM 505
+ LI + + + + +++F EM Q G+ N ++ L+ GR V
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 506 RDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSE 565
R + YN + G+ EKA+ +++ M+KR++ + VTYT++I C+L + +
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 566 ALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITY 620
A + + Y+++IS + ++GLI EA+S+F MK G P+ Y
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 218/444 (49%), Gaps = 6/444 (1%)
Query: 210 QWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHN 269
Q+ A+++F M+ + PS + L++ + + + ++M G+ P L T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 270 IVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREK 329
IV+ +Q +A + M PD T ++ + + AI LF +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 330 RSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389
+ P++VT+T++I N + + +FN M G +PN+V+YNAL+ G
Sbjct: 183 GFK--PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449
+A + ++ K + P+++++T+L++A+ + + ++A+E++N+M ++ P++ +Y +LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 450 DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RD 507
+ GLL EA ++F ME++G PN V TL+ G C K D + + EM +
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH--GFCKSKRVEDGMKIFYEMSQKG 358
Query: 508 IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEAL 567
+ NT+ Y I Y VG + A ++ M R+ PD TY VL+ C + +AL
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 568 GFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAY 627
+ M ++ + Y+ +I K G + +A +F + G P+VITYT M+ +
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 628 NTAEDWEKACALFLEMETNNIEPD 651
+A +LF +M+ + P+
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPN 502
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 214/460 (46%), Gaps = 2/460 (0%)
Query: 231 STYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFEL 290
S+Y ++ + +AL + +M + P ++ +LS +Y +S FE
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 291 MKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVN 350
M+ I P T NIV++C+ Q +A M + E PD+VTFTS+++ Y
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE--PDLVTFTSLLNGYCHW 166
Query: 351 GQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSY 410
+IE+ +F+ +L G KPN+V+Y L+ + A+ +FN++ NG P++V+Y
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 411 TSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQ 470
+L+ + A + M ++PN+++++ALIDA+ G L EA E++ M Q
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 471 DGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEK 530
+ P++ + +L+ G + E N V Y + I + E
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 531 AIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVIS 590
+ ++ M ++ V+ +++TYTVLI C + R A ++M + P + Y+ ++
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 591 AYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEP 650
G + +A +F M+ +++TYT ++ E A LF + + ++P
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 651 DSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIF 690
+ I + ++ F + G + + + M+E ++S++
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 216/486 (44%), Gaps = 45/486 (9%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
Q++ A+DLF M R LP I+ FT ++ + + + + +F M G+ P + +
Sbjct: 63 QFNDALDLFTRMVHSRP--LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
N +M A ++ K G PD+V++TSLLN Y + A +F+ +
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
KPN+V+Y+ LI N L AVE+F +M +G PN+V+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT--------------- 225
Query: 495 NIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLI 554
YN+ + +G + A L + M KR++ P+ +T+T LI
Sbjct: 226 --------------------YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 555 SSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCS 614
+ ++ + EA + M+ + + Y S+I+ GL+ EA MF +M+ +GC
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 615 PDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLV 674
P+ + YT ++H + ++ E +F EM + ++I + L++ + G+P V
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 675 AEFMREQ----DITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLH 730
M + DI + ++ + + + + +++ E ++V+ ++ Q +
Sbjct: 386 FNQMSSRRAPPDIR-TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 731 LLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQP 790
LGK +E LF + S G + N TY+ ++ G + + + M++ G P
Sbjct: 445 KLGK---VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 791 SYGMFR 796
+ +++
Sbjct: 502 NESVYK 507
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 204/468 (43%), Gaps = 37/468 (7%)
Query: 246 WREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNI 305
W A +K+ NG+ HN+ Q++ AL F M + P
Sbjct: 44 WIRAFSSYRKILRNGL------HNL---------QFNDALDLFTRMVHSRPLPSIIDFTR 88
Query: 306 VIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLA 365
++ + K+ +YD I LF M+ P + T ++H ++ Q M+
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIP--PLLCTCNIVMHCVCLSSQPCRASCFLGKMMK 146
Query: 366 EGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVK 425
G +P++V++ +L+ Y ++A+++F++I G P++V+YT+L+ +++
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 426 AREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLA 485
A E+FN M N +PN+V+Y+AL+ G +A + R+M + IEPN+++ L+
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 486 ACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMP 545
A + G+ + + + + Y S I G ++A ++ M++ P
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 546 DSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMF 605
+ V YT LI C+ R + + EM + Y+ +I Y G A+ +F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 606 NMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRA---- 661
N M PD+ TY +L EKA +F M ++ + + + +++
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 662 -------------FNKGGQPSKV---LLVAEFMREQDITFSDSIFFEM 693
F+KG +P+ + +++ F R I +DS+F +M
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 198/457 (43%), Gaps = 35/457 (7%)
Query: 350 NGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVS 409
N Q + +F M+ P+I+ + L++ A +S+F +++ G+ P + +
Sbjct: 61 NLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 410 YTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREME 469
+++ S QP +A M +P+LV++++L++ Y + +A+ +F ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 470 QDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYE 529
G +PN+V+ TL+ RC K ++N
Sbjct: 181 GMGFKPNVVTYTTLI----RCLCK--------------------------NRHLN----- 205
Query: 530 KAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVI 589
A+ L+ M P+ VTY L++ C + R+ +A L +MM +I ++++I
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 590 SAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIE 649
A+ K G + EA+ ++N+M PDV TY ++++ ++A +F ME N
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 650 PDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDL 709
P+ + + L+ F K + + + M ++ + + + ++ L+ ++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 710 IKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLA 769
QM I N LL L +G++E + +F + + N TY+I+++ +
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 770 AGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRG 806
G ++ + G++P+ + ++S RG
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 10/279 (3%)
Query: 98 VVERVLELKHYEDVEGVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWMKNQK 154
+V + E+ + D +L + R N F LI + G + + +++N M
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 155 NYCARNDI--YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWR 212
Y D+ Y +I + +D+AR +F+ M++ C P+ Y LI ++ +
Sbjct: 289 VY---PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 213 WAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVL 272
M IF +M + V + TY LI G A +V +M+ PD+ T+N++L
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 273 SAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSE 332
+ KAL FE M+ + + T+ I+I + KLG+ + A DLF S+ K +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 333 CLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPN 371
P+++T+T++I + G I +F M +G PN
Sbjct: 466 --PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 162/400 (40%), Gaps = 24/400 (6%)
Query: 441 NLVSYSALIDAYGS------NGL----LAEAVEVFREMEQDGIEPNIVSICTLLAACGRC 490
+L + I A+ S NGL +A+++F M P+I+ LL+ +
Sbjct: 37 SLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKM 96
Query: 491 GRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTY 550
R + ++ ++ I N + + +A M K PD VT+
Sbjct: 97 NRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTF 156
Query: 551 TVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKM 610
T L++ C +R +A+ D+++ + Y+++I K + A +FN M
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 611 SGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSK 670
+G P+V+TY A++ W A L +M IEP+ I +AL+ AF K G+
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK--- 273
Query: 671 VLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIG------- 723
+ E ++ S++ ++ SL+ L+ + F+++
Sbjct: 274 ---LMEAKELYNVMIQMSVYPDVFTYGSLINGL-CMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 724 LLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWM 783
+ L+H KS R+E MK+F+++ G AN TY++L++ G EV M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 784 EDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRM 823
P + ++ G E A +I E + M
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
>sp|Q9LMH5|PPR42_ARATH Putative pentatricopeptide repeat-containing protein At1g13800
OS=Arabidopsis thaliana GN=At1g13800 PE=3 SV=1
Length = 883
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/552 (24%), Positives = 243/552 (44%), Gaps = 48/552 (8%)
Query: 140 INHSNQVFNWM--KNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAET 197
I + VFN M K ++ C I + +++ + + +A LF E ++ D
Sbjct: 342 IPKAVDVFNKMLKKRKRINCV---IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC 398
Query: 198 YNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMT 257
YN A G+ G+ A+ +F +M +AP Y LI C G +A + +M
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 258 ENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYD 317
G PD+V +N++ +A ++M+ ++P THN+VI L+ G+ D
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 318 KAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNA 377
KA + S+ K E S++ + G +++ F + E P V +
Sbjct: 519 KAEAFYESLEHKSRE------NDASMVKGFCAAGCLDHAFERFIRL--EFPLPKSVYFTL 570
Query: 378 LMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINN 437
+ A +A + + + K G+ P+ Y L+ A+ R KARE F ++
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 438 LKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNID 497
+ P+L +Y+ +I+ Y +A +F +M++ ++P++V+ LL + K ++
Sbjct: 631 IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREME 690
Query: 498 AVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISS- 556
A D+ + V Y I Y ++ + +K AL+K MK+R+++PD VTYTVL+ +
Sbjct: 691 AF-------DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNK 743
Query: 557 ---------------------------CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVI 589
C++ EA D+M++ + Y+++I
Sbjct: 744 PERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 590 SAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIE 649
+ K G + EA+ +F+ M SG PDV+ YTA++ KA L EM I+
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Query: 650 PDSIACSALMRA 661
P + SA+ A
Sbjct: 864 PTKASLSAVHYA 875
Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 144/707 (20%), Positives = 278/707 (39%), Gaps = 106/707 (14%)
Query: 164 NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWR----------- 212
N +I + D G F+E+++ DA TY ++ A R
Sbjct: 186 NFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLI 245
Query: 213 ----------------WAMNIFDDMLRAAVAPSRS------------TYNNLINACGSTG 244
+N D+ + P R Y ++
Sbjct: 246 SETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEM 305
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHN 304
+A V M ++G+ PD+ ++ ++ ++ KA+ F M R + +
Sbjct: 306 RIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVS 365
Query: 305 IVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTML 364
++ C ++G + +A DLF RE D V + G++E +F M
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNISL--DRVCYNVAFDALGKLGKVEEAIELFREMT 423
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPV 424
+G+ P++++Y L+ G +A + E+ G PDIV Y L +
Sbjct: 424 GKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 425 KAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLL 484
+A E MM +KP V+++ +I+ G L +A + +E E N S+
Sbjct: 484 EAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE-NDASMVKGF 542
Query: 485 AACG---------------------------RCGRKVNIDAVLLAAEMRD------IKLN 511
A G C K D + A ++ D ++
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEK---DYISKAQDLLDRMWKLGVEPE 599
Query: 512 TVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLD 571
Y IG++ V KA ++ + +K++PD TYT++I++ CRL+ +A +
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 572 EMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAE 631
+M + YS ++++ + + E E+ F+++ PDV+ YT M++ Y
Sbjct: 660 DMKRRDVKPDVVTYSVLLNSDPELDMKREMEA-FDVI------PDVVYYTIMINRYCHLN 712
Query: 632 DWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFF 691
D +K ALF +M+ I PD + + L++ +P + L + M+ D+ +F+
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKPERNL--SREMKAFDV--KPDVFY 763
Query: 692 EMVLACSLLRDWKTTIDLIKQMEPSF-HVVSIGL------LNQLLHLLGKSGRIESMMKL 744
VL DW+ I + + + F ++ G+ L+ K G ++ +
Sbjct: 764 YTVLI-----DWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 745 FFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
F +++ SG + + Y+ L+ G K +++++ M + GI+P+
Sbjct: 819 FDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 155/745 (20%), Positives = 302/745 (40%), Gaps = 73/745 (9%)
Query: 125 KNFPFLIKEITQRGAINHSNQVFNWMKN----QKNYCARNDIYNMMIRLHARHNQIDKAR 180
K + E+ +RG V + +K +++ + +++ +A + D+A
Sbjct: 107 KKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAI 166
Query: 181 GLFFEMQKWRCK-PDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINA 239
+FF + PD + N LIS +G+ + F ++ R + TY ++ A
Sbjct: 167 DIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQA 226
Query: 240 CGSTGNWREALKVCKKM-TENGVGPDLVTHNIVLSAYKNGAQYSKALSYFEL--MKGTNI 296
+ E K+ ++ P + N + N ++YF L ++ NI
Sbjct: 227 LWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMT---DIAYFLLQPLRDANI 283
Query: 297 RPDTTTHNIVIYCLVKLGQYDKAIDLFHS--MREKRSECLPDIVTFTSIIHLYSVNGQIE 354
D + I +V+ Y+ I+ S + ++ PD+ +++II + N I
Sbjct: 284 LVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIP 343
Query: 355 NCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLL 414
VFN ML + + N V ++++ Y G EA +F E ++ + D V Y
Sbjct: 344 KAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAF 403
Query: 415 NAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIE 474
+A G+ + +A E+F M + P++++Y+ LI G ++A ++ EM+ G
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKT 463
Query: 475 PNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIAL 534
P+IV L G L E R +K V +N I ++ GE +KA A
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 535 YKCMKKRK-----------------------------VMPDSVTYTVLISSCCRLSRYSE 565
Y+ ++ + +P SV +T+ S C S+
Sbjct: 524 YESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 566 ALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLH 625
A LD M L + +Y +I A+ + + +A F ++ PD+ TYT M++
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 626 AYNTAEDWEKACALFLEMETNNIEPDSIACSAL------------MRAFNKGGQPSKV-- 671
Y + ++A ALF +M+ +++PD + S L M AF+ P V
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDV--IPDVVYY 701
Query: 672 -LLVAEFMREQDITFSDSIFFEM--------VLACSLLRDWKTTIDLIKQMEPSFHVVSI 722
+++ + D+ ++F +M V+ ++L K +L ++M+ +
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDV 761
Query: 723 GLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQW 782
L+ K G + ++F +++ SG + + Y+ L+ G ++ +
Sbjct: 762 FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDR 821
Query: 783 MEDAGIQPSYGMFRDIVSFAQTRGG 807
M ++G++P D+V + G
Sbjct: 822 MIESGVKP------DVVPYTALIAG 840
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 140 INHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYN 199
+N +V+ K+ K D+ + L + R L EM+ + KPD Y
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE-----RNLSREMKAFDVKPDVFYYT 765
Query: 200 ALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTEN 259
LI + G A IFD M+ + V P + Y LI C G +EA + +M E+
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 260 GVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVK 312
GV PD+V + +++ KA+ + M I+P + + V Y +K
Sbjct: 826 GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLK 878
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 167/428 (39%), Gaps = 19/428 (4%)
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREV 429
P++ +Y ++ G+ K+ + E+ + G S LL A G +Q +
Sbjct: 88 PSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVL--- 144
Query: 430 FNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVF-REMEQDGIEPNIVSICTLLAACG 488
++R++ +AL+ AY + + EA+++F R G P+I ++ L++
Sbjct: 145 --LIRVS---------TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMI 193
Query: 489 RCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSV 548
GR + E + + Y + + + E+ L + + V
Sbjct: 194 ASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCV 253
Query: 549 TYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQ----VYSSVISAYSKQGLIAEAESM 604
Y I C A L + D I + Y V+ + I +AES+
Sbjct: 254 FYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESV 313
Query: 605 FNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNK 664
M+ G PDV Y+A++ + + KA +F +M + + S++++ + +
Sbjct: 314 VLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ 373
Query: 665 GGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGL 724
G S+ + + RE +I+ + A L + I+L ++M +
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 725 LNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWME 784
L+ G+ L ++ +G + Y++L L G ++ E L+ ME
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 785 DAGIQPSY 792
+ G++P+Y
Sbjct: 494 NRGVKPTY 501
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 231/477 (48%), Gaps = 5/477 (1%)
Query: 175 QIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYN 234
Q ++A LF M + R P + L++ + ++ +N+ D + V+ T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 235 NLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT 294
L+N + A KM + G PD+VT +++ + G + +A+S M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 295 NIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIE 354
I+PD + +I L K G + A+ LF M PD+V +TS+++ +G+
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR--PDVVMYTSLVNGLCNSGRWR 229
Query: 355 NCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLL 414
+ + M +KP+++++NAL+ A+ G +A ++NE+ + + P+I +YTSL+
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 415 NAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIE 474
N + +AR++F +M P++V+Y++LI+ + + +A+++F EM Q G+
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 475 PNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIAL 534
N ++ TL+ G+ G+ V R + N YN + G+ +KA+ +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 535 YKCMKKRK---VMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISA 591
++ M+KR+ V P+ TY VL+ C + +AL ++M ++ + Y+ +I
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 592 YSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNI 648
K G + A ++F + G P+V+TYT M+ +A LF +M+ + +
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 224/460 (48%), Gaps = 42/460 (9%)
Query: 160 NDIY--NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNI 217
+D+Y N+++ + +Q A +M K +PD T+ +LI+ + AM++
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 218 FDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKN 277
+ M+ + P Y +I++ G+ AL + +M G+ PD+V + +++ N
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 278 GAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDI 337
++ A S M I+PD T N +I VK G++ A +L++ M R P+I
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM--IRMSIAPNI 282
Query: 338 VTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNE 397
T+TS+I+ + + G ++ + +F M +G P++V+Y +L+ + +A+ +F E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 398 IKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGL 457
+ + GL + ++YT+L+ +G+ +P A+EVF+ M + PN+ +Y+ L+ NG
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 458 LAEAVEVFREM---EQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVA 514
+ +A+ +F +M E DG+ PNI + ++ L+ +
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTY--------------------------NVLLHGLC 436
Query: 515 YNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMM 574
YN G+ EKA+ +++ M+KR++ +TYT++I C+ + A+ +
Sbjct: 437 YN---------GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 575 DLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCS 614
+ Y+++IS ++GL EA +F MK G S
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/507 (23%), Positives = 238/507 (46%), Gaps = 43/507 (8%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
Q+++A+DLF M E R LP I+ FT ++++ + + + + + + G+ ++ +
Sbjct: 52 QFNEALDLFTHMVESRP--LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
N LM + A S ++ K G PDIV++TSL+N + + +A + N M
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
+KP++V Y+ +ID+ NG + A+ +F +ME GI P++V
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV---------------- 213
Query: 495 NIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLI 554
Y S + N G + A +L + M KRK+ PD +T+ LI
Sbjct: 214 -------------------MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 555 SSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCS 614
+ + ++ +A +EM+ + I Y+S+I+ + +G + EA MF +M+ GC
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 615 PDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLV 674
PDV+ YT++++ + + + A +F EM + ++I + L++ F + G+P+ V
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 675 AEFMREQDITFSDSIFFEMVLAC----SLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLH 730
M + + + + ++L C ++ + +++ E +I N LLH
Sbjct: 375 FSHMVSRGVP-PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 731 LLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQP 790
L +G++E + +F + + TY+I+++ + AG + + + + G++P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 791 SYGMFRDIVSFAQTRGGAEYAAIIQER 817
+ + ++S R G ++ A + R
Sbjct: 494 NVVTYTTMIS-GLFREGLKHEAHVLFR 519
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 179/349 (51%), Gaps = 10/349 (2%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDI--YNMMIRLHARHNQIDKARGLFFEMQ 187
+I + + G +N++ +F+ M+N Y R D+ Y ++ + A L M
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMEN---YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 188 KWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWR 247
K + KPD T+NALI A + G++ A ++++M+R ++AP+ TY +LIN G
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 248 EALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVI 307
EA ++ M G PD+V + +++ + + A+ F M + +T T+ +I
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 308 YCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLA-- 365
++G+ + A ++F M + P+I T+ ++H NG+++ +F M
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVP--PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 366 -EGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPV 424
+G+ PNI +YN L+ +G ++AL VF +++K + I++YT ++ ++ +
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 425 KAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGI 473
A +F + +KPN+V+Y+ +I GL EA +FR+M++DG+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 166/376 (44%), Gaps = 12/376 (3%)
Query: 460 EAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAI 519
EA+++F M + P+I+ LL + + + + ++ + + N +
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 520 GSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIP 579
+ + A + M K PD VT+T LI+ C +R EA+ +++M+++ I
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 580 LTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACAL 639
+Y+++I + K G + A S+F+ M+ G PDV+ YT++++ + W A +L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 640 FLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSL 699
M I+PD I +AL+ AF K G+ L AE + + I S I + SL
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGK----FLDAEELYNEMIRMS--IAPNIFTYTSL 288
Query: 700 LRDW--KTTIDLIKQM----EPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGA 753
+ + + +D +QM E + L++ K +++ MK+F+++ G
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 754 EANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAI 813
N TY+ L++ G EV M G+ P+ + ++ G + A +
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 814 IQERIESLRMKSGDPS 829
I E ++ M P+
Sbjct: 409 IFEDMQKREMDGVAPN 424
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 235/482 (48%), Gaps = 8/482 (1%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y ++R ++D A GLF M + R P ++ L+SA + ++ ++ + M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
++ + TYN LIN AL + KM + G PD+VT N +L+ + +G + S
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A++ + M +PDT T +I+ L + +A+ L M ++ C PD+VT+ +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR--GCQPDLVTYGA 223
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+++ G + + N M A ++ N+V Y+ ++ + + +AL++F E++ G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 403 LCPDIVSYTSLLNA---YGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLA 459
+ P++++Y+SL++ YGR A + + M + PNLV++SALIDA+ G L
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSD---ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 460 EAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAI 519
+A +++ EM + I+PNI + +L+ R +L +D N V YN+ I
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 520 GSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIP 579
+ +K + L++ M +R ++ ++VTYT LI + A +M+ + +
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 580 LTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACAL 639
Y+ ++ K G +A+A +F ++ S PD+ TY M+ A W+
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIY 520
Query: 640 FL 641
F+
Sbjct: 521 FV 522
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 220/468 (47%), Gaps = 18/468 (3%)
Query: 315 QYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVS 374
+ D AI LF M + R P I+ F+ ++ + + + M G+ N+ +
Sbjct: 58 ELDDAIGLFGVMAQSRP--FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 375 YNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMR 434
YN L+ + AL++ ++ K G PDIV+ SLLN + + A + + M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 435 INNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKV 494
KP+ V+++ LI + +EAV + M Q G +P++V+ ++ G C R
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN--GLCKRGD 233
Query: 495 NIDAVLLAAEMRDIKL--NTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTV 552
A+ L +M K+ N V Y++ I S + A+ L+ M+ + V P+ +TY+
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 553 LISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSG 612
LIS C R+S+A L +M++ KI +S++I A+ K+G + +AE ++ M
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 613 CSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVL 672
P++ TY+++++ + + +A + M + P+ + + L+ F K + K +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 673 LVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGL------LN 726
+ M ++ + + + ++ RD + KQM VS+G+ N
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM------VSVGVHPNILTYN 467
Query: 727 QLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWR 774
LL L K+G++ M +F + S E + TY+I+++ + AG W+
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 150/287 (52%), Gaps = 3/287 (1%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
++ + +RG + + + N M+ K A IY+ +I ++ D A LF EM+
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIE-ANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
+P+ TY++LIS G+W A + DM+ + P+ T++ LI+A G +A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
K+ ++M + + P++ T++ +++ + + +A ELM + P+ T+N +I
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 310 LVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLK 369
K + DK ++LF M ++ + + VT+T++IH + +N + VF M++ G+
Sbjct: 403 FCKAKRVDKGMELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 370 PNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNA 416
PNI++YN L+ +G +A+ VF ++++ + PDI +Y ++
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 208/441 (47%), Gaps = 12/441 (2%)
Query: 390 EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449
+A+ +F + ++ P I+ ++ LL+A + + M I + NL +Y+ LI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 450 DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC-GRKVNIDAVLLAAEMRDI 508
+ + L+ A+ + +M + G EP+IV++ +LL G C G +++ DAV L +M ++
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLN--GFCHGNRIS-DAVALVDQMVEM 177
Query: 509 --KLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEA 566
K +TV + + I + +A+AL M +R PD VTY +++ C+ A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 567 LGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHA 626
L L++M KI +YS+VI + K +A ++F M+ G P+VITY++++
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 627 YNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDI--- 683
W A L +M I P+ + SAL+ AF K G+ K + E M ++ I
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 684 TFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMK 743
F+ S L + K ++L+ + + +VV+ N L++ K+ R++ M+
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT---YNTLINGFCKAKRVDKGME 414
Query: 744 LFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQ 803
LF ++ G N TY+ L+ A + V + M G+ P+ + ++
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 804 TRGGAEYAAIIQERIESLRMK 824
G A ++ E ++ M+
Sbjct: 475 KNGKLAKAMVVFEYLQRSTME 495
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEM 186
F LI ++G + + +++ M +++ Y+ +I +++ +A+ + M
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMI-KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 187 QKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNW 246
+ C P+ TYN LI+ +A + M +F +M + + + TY LI+ +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 247 REALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIV 306
A V K+M GV P+++T+NI+L + +KA+ FE ++ + + PD T+NI+
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 307 IYCLVKLGQY 316
I + K G++
Sbjct: 505 IEGMCKAGKW 514
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 134/303 (44%), Gaps = 3/303 (0%)
Query: 527 EYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYS 586
E + AI L+ M + + P + ++ L+S+ +++++ + F ++M L I Y+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 587 SVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETN 646
+I+ + + ++ A ++ M G PD++T ++L+ + A AL +M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 647 NIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTT 706
+PD++ + L+ + S+ + + + M ++ + +V D
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 707 IDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKN 766
++L+ +ME + ++ + + ++ L K + + LF ++ + G N TYS L+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 767 LLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMKSG 826
L G W +L M + I P+ F ++ +G A ++ E + +S
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA---EKLYEEMIKRSI 354
Query: 827 DPS 829
DP+
Sbjct: 355 DPN 357
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
LI + ++ ++F M +Q+ Y +I + D A+ +F +M
Sbjct: 399 LINGFCKAKRVDKGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWR 247
P+ TYN L+ + G+ AM +F+ + R+ + P TYN +I G W+
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 231/501 (46%), Gaps = 6/501 (1%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
+N + A+ Q + L +M+ T + +I+ R + +A + ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ P +N L+N EAL++ +M E G P L+T N +++ + S
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
A+ + M T +P+ T+ V+ + K GQ A++L M E+ + D V ++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL--DAVKYSI 268
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
II +G ++N +FN M +G K +I++YN L+ + + G + + ++ K
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ P++V+++ L++++ + + +A ++ M + PN ++Y++LID + L EA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEM--RDIKLNTVAYNSAIG 520
++ M G +P+I++ L+ G C D + L EM R + NTV YN+ +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILIN--GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
+ G+ E A L++ M R+V PD V+Y +L+ C +AL ++ K+ L
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 581 TNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALF 640
+Y +I + +A +F + + G D Y M+ + KA LF
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 641 LEMETNNIEPDSIACSALMRA 661
+M PD + + L+RA
Sbjct: 567 RKMTEEGHAPDELTYNILIRA 587
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 215/439 (48%), Gaps = 4/439 (0%)
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A+++F DM+++ P+ +N L +A T + L +CK+M G+ + T +I+++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
+ + S A S + PDT N ++ L + +A++L M E +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK- 190
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
P ++T ++++ +NG++ + + + M+ G +PN V+Y ++ G + A+
Sbjct: 191 -PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYG 453
+ ++++ + D V Y+ +++ + A +FN M I K ++++Y+ LI +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 454 SNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTV 513
+ G + ++ R+M + I PN+V+ L+ + + G+ D +L R I NT+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 514 AYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEM 573
YNS I + E+AI + M + PD +T+ +LI+ C+ +R + L E
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE- 428
Query: 574 MDLKIPLTNQV-YSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAED 632
M L+ + N V Y++++ + + G + A+ +F M PD+++Y +L +
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 633 WEKACALFLEMETNNIEPD 651
EKA +F ++E + +E D
Sbjct: 489 LEKALEIFGKIEKSKMELD 507
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 219/490 (44%), Gaps = 37/490 (7%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDM 221
I+N ++ ++ +A L M + KP T N L++ G+ A+ + D M
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQY 281
+ P+ TY ++N +G A+++ +KM E + D V ++I++
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 282 SKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFT 341
A + F M+ + D T+N +I G++D L M +++ P++VTF+
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS--PNVVTFS 337
Query: 342 SIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKN 401
+I + G++ + M+ G+ PN ++YN+L+ + +EA+ + + +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 402 GLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEA 461
G PDI+++ L+N Y ++ + E+F M + + N V+Y+ L+ + +G L A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 462 VEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGS 521
++F+EM + P+IVS LL G C
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLD--GLCDN----------------------------- 486
Query: 522 YMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLT 581
GE EKA+ ++ ++K K+ D Y ++I C S+ +A + + L
Sbjct: 487 ----GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 582 NQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFL 641
+ Y+ +IS ++ +++A+ +F M G +PD +TY ++ A+ +D A L
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 642 EMETNNIEPD 651
EM+++ D
Sbjct: 603 EMKSSGFPAD 612
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 207/483 (42%), Gaps = 37/483 (7%)
Query: 317 DKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYN 376
D A+DLF M + R LP ++ F + + Q E + M ++G+ +I + +
Sbjct: 70 DDAVDLFRDMIQSRP--LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 377 ALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRIN 436
++ + A S +I K G PD V + +LLN + +A E+ + M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 437 NLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNI 496
KP L++ + L++ NG +++AV + M + G +PN V+ +L + G+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 497 DAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISS 556
+L E R+IKL+ V Y+ I G + A L+ M+ + D +TY LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 557 CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
C R+ + L +M+ KI +S +I ++ K+G + EA+ + M G +P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAE 676
ITY +++ + E+A + M + +PD + + L+ + K + L
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL---- 423
Query: 677 FMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSG 736
+L ++M + + N L+ +SG
Sbjct: 424 -------------------------------ELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 737 RIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFR 796
++E KLF ++VS + +Y ILL L G K +E+ +E + ++ G++
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 797 DIV 799
I+
Sbjct: 513 III 515
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 184/433 (42%), Gaps = 41/433 (9%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
Y ++ + + Q A L +M++ K DA Y+ +I + G A N+F++M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
TYN LI + G W + K+ + M + + P++VT ++++ ++ +
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+A + M I P+T T+N +I K + ++AI + M K C PDI+TF
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK--GCDPDIMTFNI 408
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
+I+ Y +I++ +F M G+ N V+YN L+ + G + A +F E+
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
+ PDIVSY LL D NG L +A+
Sbjct: 469 VRPDIVSYKILL-----------------------------------DGLCDNGELEKAL 493
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDA--VLLAAEMRDIKLNTVAYNSAIG 520
E+F ++E+ +E +I ++ G C DA + + ++ +KL+ AYN I
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIH--GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 521 SYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL 580
KA L++ M + PD +TY +LI + + A ++EM P
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 581 TNQVYSSVISAYS 593
VI+ S
Sbjct: 612 DVSTVKMVINMLS 624
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 198/466 (42%), Gaps = 35/466 (7%)
Query: 359 VFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYG 418
+F M+ P ++ +N L +A A + L++ +++ G+ I + + ++N +
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 419 RSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIV 478
R ++ A + +P+ V ++ L++ ++EA+E+ M + G +P ++
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 479 SICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCM 538
++ TL+ N + N G+ A+ L M
Sbjct: 195 TLNTLV--------------------------NGLCLN---------GKVSDAVVLIDRM 219
Query: 539 KKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLI 598
+ P+ VTY +++ C+ + + A+ L +M + I L YS +I K G +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 599 AEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSAL 658
A ++FN M++ G D+ITY ++ + A W+ L +M I P+ + S L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 659 MRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFH 718
+ +F K G+ + + + M ++ I + + ++ + I ++ M
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 719 VVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIE 778
I N L++ K+ RI+ ++LF ++ G AN TY+ L++ +G +
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 779 VLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMK 824
+ Q M ++P ++ ++ G E A I +IE +M+
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 3/289 (1%)
Query: 127 FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEM 186
F LI + G + ++Q+ M Q+ YN +I + N++++A + M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 187 QKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNW 246
C PD T+N LI+ + +A + + +F +M V + TYN L+ +G
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 247 REALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIV 306
A K+ ++M V PD+V++ I+L + + KAL F ++ + + D + I+
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 307 IYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAE 366
I+ + + D A DLF S+ K + D + +I + +F M E
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKL--DARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 367 GLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLN 415
G P+ ++YN L+ A+ + A + E+K +G D+ + ++N
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 137/342 (40%), Gaps = 39/342 (11%)
Query: 454 SNGLLA----EAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIK 509
S+GL+ +AV++FR+M Q P ++ L +A + + + A+ E + I
Sbjct: 61 SSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 510 LNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGF 569
+ + I + + A + + K PD+V + L++ C R SEAL
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 570 LDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNT 629
+D M+++ T +++++ G +++A + + M +G P+ +TY +L+
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 630 AEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSI 689
+ A L +ME NI+ D++ S ++ K G
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS---------------------- 278
Query: 690 FFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIV 749
+L +ME I N L+ +GR + KL ++
Sbjct: 279 -------------LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 750 SSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
N T+S+L+ + + G R+ ++L+ M GI P+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/572 (22%), Positives = 261/572 (45%), Gaps = 25/572 (4%)
Query: 139 AINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETY 198
+++ + F++M + + D N +I + R N+ D A L+ +M+ R + ++
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 199 NALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACG----------------S 242
N LI + ++++ F + + P T+N L++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 243 TGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTT 302
TG + EA+ + +M E G+ P ++T N +++ + +A + M G + D T
Sbjct: 205 TG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 303 HNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNT 362
+ ++ + K+G A++L M E + PD+V +++II +G + + +F+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIK--PDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 363 MLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQ 422
ML +G+ PN+ +YN ++ + S G +A + ++ + + PD++++ +L++A + +
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 423 PVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICT 482
+A ++ + M + P+ V+Y+++I + + +A +F M P++V+ T
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 483 LLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRK 542
++ R R +L R + NT YN+ I + V A L++ M
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 543 VMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAE 602
V PD++T +L+ C + EAL + + KI L Y+ +I K + EA
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 603 SMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAF 662
+F + + G PDV TY M+ + A LF +M+ N EPD+ + L+R
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 663 NKGGQPSKVLLVAEFMREQDITFSDSIFFEMV 694
K G+ K + + MR + D+ +MV
Sbjct: 618 LKAGEIDKSIELISEMRSNGFS-GDAFTIKMV 648
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/580 (23%), Positives = 261/580 (45%), Gaps = 38/580 (6%)
Query: 214 AMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLS 273
A++ FD M+R+ + N +I A+ + +KM + ++ + NI++
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 274 AYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSEC 333
+ + + S +LS F + +PD T N +++ L + +A+ LF M E
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE----- 204
Query: 334 LPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALS 393
G +E +F+ M+ GL P ++++N L+ G EA +
Sbjct: 205 ----------------TGFLEAV-ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 394 VFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYG 453
+ N++ GL D+V+Y +++N + A + + M ++KP++V YSA+ID
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 454 SNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTV 513
+G ++A +F EM + GI PN+ + ++ GR + +L R+I + +
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 514 AYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEM 573
+N+ I + + G+ +A L M R + PD+VTY +I C+ +R+ +A M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHM 423
Query: 574 MDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDW 633
DL ++++I Y + + E + + G + TY ++H + ++
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 634 EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEM 693
A LF EM ++ + PD+I C+ L+ F + + + L + E ++ I D++ + +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL-DTVAYNI 542
Query: 694 VL-----ACSLLRDWKTTIDL-IKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFK 747
++ + W L I +EP ++ + GKS I LF K
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV----MISGFCGKSA-ISDANVLFHK 597
Query: 748 IVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAG 787
+ +G E + +TY+ L++ L AG K IE++ M G
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 41/288 (14%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN MI +HN+ D A+ +F M PD T+N +I + RA + M + ++
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
R + + +TYN LI+ N A + ++M +GV PD +T NI+L + +
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+AL FE+++ + I DT +NI+I+ + K + D+A DLF S LP
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS--------LP------- 564
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
IH G++P++ +YN +++ + +A +F+++K NG
Sbjct: 565 -IH---------------------GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALID 450
PD +Y +L+ ++ + K+ E+ + MR N + + + D
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 181/404 (44%), Gaps = 31/404 (7%)
Query: 408 VSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFRE 467
V ++ + R +P A ++ M I + N+ S++ LI + L+ ++ F +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 468 MEQDGIEPNIVSICTLLAACGRC------------GRKVN---IDAVLLAAEMRDIKLN- 511
+ + G +P++V+ TLL G C G V ++AV L +M +I L
Sbjct: 167 LTKLGFQPDVVTFNTLLH--GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 512 -TVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFL 570
+ +N+ I G +A AL M + + D VTY +++ C++ AL L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 571 DEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTA 630
+M + I +YS++I K G ++A+ +F+ M G +P+V TY M+ + +
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 631 EDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIF 690
W A L +M I PD + +AL+ A K G+ + + + M + I F D++
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI-FPDTVT 403
Query: 691 FEMVLA--CSLLR--DWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFF 746
+ ++ C R D K DL+ S VV+ N ++ + ++ R++ M+L
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT---FNTIIDVYCRAKRVDEGMQLLR 456
Query: 747 KIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQP 790
+I G AN TY+ L+ N ++ Q M G+ P
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 17/198 (8%)
Query: 130 LIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKW 189
L++EI++RG + A YN +I + ++ A+ LF EM
Sbjct: 454 LLREISRRGLV-----------------ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 190 RCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREA 249
PD T N L+ + A+ +F+ + + + YN +I+ EA
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 250 LKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYC 309
+ + +GV PD+ T+N+++S + + S A F MK PD +T+N +I
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 310 LVKLGQYDKAIDLFHSMR 327
+K G+ DK+I+L MR
Sbjct: 617 CLKAGEIDKSIELISEMR 634
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 124/300 (41%), Gaps = 21/300 (7%)
Query: 513 VAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDE 572
V N IG ++ + + AI+LY+ M+ R++ + ++ +LI C + S +L +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 573 MMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAED 632
+ L +++++ + I+EA ++F M +G
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG-------------------- 206
Query: 633 WEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFE 692
+ +A ALF +M + P I + L+ G+ + + M + + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 693 MVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSG 752
+V + D K+ ++L+ +ME + + + + ++ L K G LF +++ G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 753 AEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAA 812
N TY+ ++ + G W +L+ M + I P F ++S A + G + A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS-ASVKEGKLFEA 385
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN++I + +++D+A LF + +PD +TYN +IS A +F M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNG 278
P STYN LI C G +++++ +M NG D T +V +G
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDG 655
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 280/596 (46%), Gaps = 35/596 (5%)
Query: 110 DVEG---VLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIY 163
DVEG VL R +N + LIK ++G + + VF +K +K A +Y
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK-EKKLVADQHMY 334
Query: 164 NMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLR 223
+++ + R QI A + M + + + N+LI+ + ++GQ A IF M
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 224 AAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSK 283
++ P TYN L++ G EALK+C +M + V P ++T+NI+L Y +
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 284 ALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSI 343
LS +++M + D + + ++ L KLG +++A+ L+ ++ + L D +T +
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR--GLLTDTITLNVM 512
Query: 344 IHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGL 403
I ++ K + + + KP + +Y AL Y G KEA +V +++ G+
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 404 CPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVE 463
P I Y +L++ + + K ++ +R L P + +Y ALI + + G++ +A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 464 VFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYM 523
EM + GI N V+IC+ +A K++ +A LL ++ D L + Y
Sbjct: 633 TCFEMIEKGITLN-VNICSKIANSLFRLDKID-EACLLLQKIVDFDL-------LLPGYQ 683
Query: 524 NVGEYEKAIALYKCMKKRKV-------------MPDSVTYTVLISSCCRLSRYSEALGFL 570
++ E+ +A A C+K +K+ +P+++ Y V I+ C+ + +A
Sbjct: 684 SLKEFLEASAT-TCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF 742
Query: 571 DEMM--DLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYN 628
+++ D IP Y+ +I + G I +A ++ + M + G P+++TY A++
Sbjct: 743 SDLLSSDRFIP-DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC 801
Query: 629 TAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDIT 684
+ ++A L ++ I P++I + L+ K G ++ + + E M E+ +
Sbjct: 802 KLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/635 (22%), Positives = 279/635 (43%), Gaps = 42/635 (6%)
Query: 197 TYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKM 256
++ ++ + G + A+++FD+M PS + N+L++ G AL V +M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 257 TENGVGPDLVTHNIVLSAYKNGAQYSKALSYF-ELMKGTNIRPDTTTHNIVIYCLVKLGQ 315
V PD+ T +IV++AY KA+ + E + + T+N +I +G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 316 YDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSY 375
+ + M E+ ++VT+TS+I Y G +E + VF + + L + Y
Sbjct: 277 VEGMTRVLRLMSERGVS--RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 376 NALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRI 435
LM Y G ++A+ V + + + G+ + SL+N Y +S Q V+A ++F+ M
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 436 NNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVN 495
+LKP+ +Y+ L+D Y G + EA+++ +M Q + P +++ LL R G +
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 496 IDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLIS 555
+ ++ R + + ++ ++ + + +G++ +A+ L++ + R ++ D++T V+IS
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 556 SCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSP 615
C++ + +EA LD + + Q Y ++ Y K G + EA ++ M+ G P
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 616 DVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVA 675
+ Y ++ K L +E+ + P AL+ + G K
Sbjct: 575 TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC 634
Query: 676 EFMREQDITF--------SDSIF-----------------FEMVL-------------AC 697
M E+ IT ++S+F F+++L A
Sbjct: 635 FEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASAT 694
Query: 698 SLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGA-EAN 756
+ L+ K + V + + N + L K+G++E KLF ++SS +
Sbjct: 695 TCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPD 754
Query: 757 FNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
TY+IL+ AG+ K + M GI P+
Sbjct: 755 EYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN 789
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/561 (22%), Positives = 239/561 (42%), Gaps = 41/561 (7%)
Query: 163 YNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDML 222
YN +I +A ++ + M + + TY +LI + + G A ++F+ +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 223 RAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYS 282
+ + Y L++ TG R+A++V M E GV + N +++ Y Q
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 283 KALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTS 342
+A F M +++PD T+N ++ + G D+A+ L M +K E +P ++T+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK--EVVPTVMTYNI 441
Query: 343 IIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNG 402
++ YS G + ++ ML G+ + +S + L+ A G EA+ ++ + G
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 403 LCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAV 462
L D ++ +++ + ++ +A+E+ + + I KP + +Y AL Y G L EA
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 463 EVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSY 522
V ME+ GI P I TL++ + + +++ R + Y + I +
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGW 621
Query: 523 MNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPL-- 580
N+G +KA A M ++ + + + + +S RL + EA L +++D + L
Sbjct: 622 CNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPG 681
Query: 581 ------------------------------------TNQVYSSVISAYSKQGLIAEAESM 604
N VY+ I+ K G + +A +
Sbjct: 682 YQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741
Query: 605 F-NMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFN 663
F +++ PD TYT ++H A D KA L EM I P+ + +AL++
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC 801
Query: 664 KGGQPSKVLLVAEFMREQDIT 684
K G + + + ++ IT
Sbjct: 802 KLGNVDRAQRLLHKLPQKGIT 822
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 135/623 (21%), Positives = 259/623 (41%), Gaps = 31/623 (4%)
Query: 187 QKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNW 246
QK+R PD + Y ++ RA ++ + ++ VA + S + W
Sbjct: 98 QKFR--PDYKAYCKMVHILSRARNYQQTKSYLCEL----VALNHSGFVV----------W 141
Query: 247 REALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIV 306
E ++V K+ + P +++L Y AL F+ M P + N +
Sbjct: 142 GELVRVFKEFS---FSP--TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSL 196
Query: 307 IYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVF--NTML 364
+ LV+ G+ A+ ++ M E PD+ T + +++ Y +G ++ VF T
Sbjct: 197 LSNLVRKGENFVALHVYDQMIS--FEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETES 253
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPV 424
+ GL+ N+V+YN+L+ YA G + V + + G+ ++V+YTSL+ Y +
Sbjct: 254 SLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLME 313
Query: 425 KAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLL 484
+A VF +++ L + Y L+D Y G + +AV V M + G+ N +IC L
Sbjct: 314 EAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTN-TTICNSL 372
Query: 485 AACGRCGRKVNIDAVLLAAEMRD--IKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRK 542
G C ++A + + M D +K + YN+ + Y G ++A+ L M +++
Sbjct: 373 IN-GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 543 VMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAE 602
V+P +TY +L+ R+ + + L M+ + S+++ A K G EA
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 603 SMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAF 662
++ + G D IT M+ E +A + + +P AL +
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 663 NKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSI 722
K G + V E+M + I + ++ ++ R DL+ ++ ++
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV 611
Query: 723 GLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQW 782
L+ G I+ F+++ G N N S + +L + +LQ
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 671
Query: 783 MEDAG-IQPSYGMFRDIVSFAQT 804
+ D + P Y ++ + + T
Sbjct: 672 IVDFDLLLPGYQSLKEFLEASAT 694
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 252/549 (45%), Gaps = 41/549 (7%)
Query: 162 IYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGR---AGQWRWAMNIF 218
++++ + + + A +F +M + + KP+ T N L+ R + A +F
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 219 DDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKM-TENGVGPDLVTHNIVLSAYKN 277
DDM++ V+ + T+N L+N G +AL + ++M +E V PD VT+N +L A
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 278 GAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDI 337
+ S MK + P+ T+N ++Y KLG +A + M K++ LPD+
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM--KQTNVLPDL 310
Query: 338 VTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFNE 397
T+ +I+ G + + + M + L+P++V+YN L+ G+S EA + +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 398 IKKNGLCPDIVSYTSLLNAYGRSQQ-PVKAREVFNMMRINNLKPNLVSYSALIDAYGSNG 456
++ +G+ + V++ L + ++ R+V ++ ++ P++V+Y LI AY G
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 457 LLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYN 516
L+ A+E+ REM Q GI+ N +++ T+L A + + +L +A R ++ V Y
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 517 SAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDL 576
+ I + + EKA+ ++ MKK K+ P T+ LI C + A+ DE+ +
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 577 KIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSP--------------------- 615
+ + ++S+I Y K+G + +A +N P
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 616 -------------DVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAF 662
D +TY M+ A+ + ++A L EME +EPD ++ +
Sbjct: 611 LNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 663 NKGGQPSKV 671
+ G+ S+
Sbjct: 671 MEDGKLSET 679
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/570 (24%), Positives = 250/570 (43%), Gaps = 49/570 (8%)
Query: 222 LRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSA---YKNG 278
L + PS++ ++ ++A G AL++ +KM + P+L+T N +L Y +
Sbjct: 123 LHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSS 182
Query: 279 AQYSKALSYFELMKGTNIRPDTTTHNIVI--YCLVKLGQYDKAIDLFHSMREKRSECLPD 336
S A F+ M + + T N+++ YCL G+ + A+ + M + + PD
Sbjct: 183 FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLE--GKLEDALGMLERMVSE-FKVNPD 239
Query: 337 IVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSKEALSVFN 396
VT+ +I+ S G++ + K + M GL PN V+YN L+ Y G KEA +
Sbjct: 240 NVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 397 EIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNG 456
+K+ + PD+ +Y L+N + + E+ + M+ L+P++V+Y+ LID G
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 457 LLAEAVEVFREMEQDGIE------------------------------------PNIVSI 480
L EA ++ +ME DG++ P+IV+
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 481 CTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKK 540
TL+ A + G ++ + IK+NT+ N+ + + + ++A L K
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 541 RKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAE 600
R + D VTY LI R + +AL DEM +KI T ++S+I G
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 601 AESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMR 660
A F+ + SG PD T+ +++ Y EKA + E ++ +PD+ C+ L+
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 661 AFNKGGQPSKVL-LVAEFMREQDITFSDSIFFE-MVLACSLLRDWKTTIDLIKQMEPSFH 718
K G K L + E+++ D++ + M+ A + K DL+ +ME
Sbjct: 600 GLCKEGMTEKALNFFNTLIEEREV---DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 719 VVSIGLLNQLLHLLGKSGRIESMMKLFFKI 748
N + LL + G++ +L K
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 216/500 (43%), Gaps = 37/500 (7%)
Query: 125 KNFPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYNMMIRLHARHNQIDKARGLFF 184
+ F L+ G + + + M ++ N YN +++ ++ ++ + L
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 185 EMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTG 244
+M+K P+ TYN L+ + + G + A I + M + V P TYN LIN + G
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 245 NWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHN 304
+ RE L++ M + PD+VT+N ++ +A E M+ ++ + THN
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 305 IVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTML 364
I + L K + + + + PDIVT+ ++I Y G + + M
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFS-PDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 365 AEGLKPNIVSYNALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPV 424
+G+K N ++ N ++ A EA ++ N K G D V+Y +L+ + R ++
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 425 KAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLL 484
KA E+++ M+ + P + ++++LI +G A+E F E+ + G+ P
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP--------- 554
Query: 485 AACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVM 544
+ +NS I Y G EKA Y K
Sbjct: 555 --------------------------DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 545 PDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESM 604
PD+ T +L++ C+ +AL F + +++ + + Y+++ISA+ K + EA +
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDL 647
Query: 605 FNMMKMSGCSPDVITYTAML 624
+ M+ G PD TY + +
Sbjct: 648 LSEMEEKGLEPDRFTYNSFI 667
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/555 (23%), Positives = 257/555 (46%), Gaps = 20/555 (3%)
Query: 263 PDLVTHNIVLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDL 322
P +I LSAY + + AL F+ M ++P+ T N ++ LV+ Y + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR---YPSSFSI 185
Query: 323 FHSMREKRSECLP-----DIVTFTSIIHLYSVNGQIENCKGVFNTMLAE-GLKPNIVSYN 376
S RE + + ++ TF +++ Y + G++E+ G+ M++E + P+ V+YN
Sbjct: 186 -SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 377 ALMAAYASHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRIN 436
++ A + G + + ++KKNGL P+ V+Y +L+ Y + +A ++ +M+
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 437 NLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNI 496
N+ P+L +Y+ LI+ + G + E +E+ M+ ++P++V+ TL+ C G +
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 497 DAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVM----PDSVTYTV 552
++ E +K N V +N ++ + + EK A+ + +K+ M PD VTY
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKW---LCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 553 LISSCCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSG 612
LI + ++ S AL + EM I + ++++ A K+ + EA ++ N G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 613 CSPDVITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVL 672
D +TY ++ + E EKA ++ EM+ I P ++L+ G+ +
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 673 LVAEFMREQDITFSDSIFFEMVLA-CSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHL 731
+ + E + DS F ++L C R K + ++ SF + N LL+
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT-CNILLNG 600
Query: 732 LGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPS 791
L K G E + FF + E + TY+ ++ ++ ++L ME+ G++P
Sbjct: 601 LCKEGMTEKALN-FFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 792 YGMFRDIVSFAQTRG 806
+ +S G
Sbjct: 660 RFTYNSFISLLMEDG 674
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 122/307 (39%), Gaps = 68/307 (22%)
Query: 515 YNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMM 574
++ A+ +Y++ G+ A+ +++ M + K+ P+ +T L+ R
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR--------------- 178
Query: 575 DLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWE 634
Y S S I+ A +F+ M G S +V T+ +++ Y E
Sbjct: 179 ----------YPSSFS-------ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE 221
Query: 635 KACALFLEMETN-NIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEM 693
A + M + + PD++ + +++A +K G+
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGR-------------------------- 255
Query: 694 VLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGA 753
L D K +L+ M+ + V + N L++ K G ++ ++ + +
Sbjct: 256 ------LSDLK---ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 754 EANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAI 813
+ TY+IL+ L AG+ R+ +E++ M+ +QP + ++ G + A
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 814 IQERIES 820
+ E++E+
Sbjct: 367 LMEQMEN 373
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 159/720 (22%), Positives = 295/720 (40%), Gaps = 108/720 (15%)
Query: 166 MIRLHARHNQIDKARGLFFEMQKWRC-----KPDAETYNALISAHGRAGQWRWAMNIFDD 220
++ + A+ N IDKA F + Q R KP YN L+ + + + + ++ D
Sbjct: 81 VVSIFAKSNHIDKA---FPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKD 137
Query: 221 MLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQ 280
M+ +AP T+N LI A + A ++ +M E G P+ T I++ Y
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 281 YSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRSECLPDIVTF 340
K L M+ + P+ +N ++ + G+ D + + MRE+ +PDIVTF
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG--LVPDIVTF 255
Query: 341 TSIIHLYSVNGQIENCKGVFNTM-LAEGL---KPNIVSYNALMAAYASHGMSKEALSVFN 396
S I G++ + +F+ M L E L +PN ++YN ++ + G+ ++A ++F
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Query: 397 EIKKN-----------------------------------GLCPDIVSYTSLLNAYGRSQ 421
I++N G+ P I SY L++ +
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 422 QPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSIC 481
A+ + +M+ N + P+ V+Y L+ Y S G + A + +EM ++ PN +
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 482 TLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMK-- 539
LL + + GR + +L + L+TV N + GE +KAI + K M+
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495
Query: 540 ---------------------KRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMDLKI 578
+ +PD +TY+ L++ C+ R++EA EMM K+
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Query: 579 PLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDWEKACA 638
+ Y+ I + KQG I+ A + M+ GC + TY +++ +
Sbjct: 556 QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHG 615
Query: 639 LFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEMVLACS 698
L EM+ I P+ + ++ +G + + + M +++I + ++F
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI--APNVF-------- 665
Query: 699 LLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEANFN 758
+K I+ ++ P F M + F+ S
Sbjct: 666 ---SFKYLIEAFCKV-PDF----------------------DMAQEVFETAVSICGQKEG 699
Query: 759 TYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERI 818
YS++ LLAAG K E+L+ + D G + +++D+V + E A+ I ++
Sbjct: 700 LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 226/564 (40%), Gaps = 47/564 (8%)
Query: 108 YEDVEGVLNRWVGRFARKN---FPFLIKEITQRGAINHSNQVFNWMKNQKNYCARNDIYN 164
+ D+E L+ ++G R N + ++K + G + + +F ++ + + YN
Sbjct: 275 FSDME--LDEYLG-LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS-YN 330
Query: 165 MMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQWRWAMNIFDDMLRA 224
+ ++ RH + +A + +M P +YN L+ + G A I M R
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Query: 225 AVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKA 284
V P TY L++ S G A + ++M N P+ T NI+L + + S+A
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Query: 285 LSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMREKRS------------- 331
M DT T NI++ L G+ DKAI++ MR S
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 332 --------ECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYA 383
CLPD++T++++++ G+ K +F M+ E L+P+ V+YN + +
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 384 SHGMSKEALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLV 443
G A V +++K G + +Y SL+ G Q + + + M+ + PN+
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 444 SYSALIDAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRC-----GRKVNIDA 498
+Y+ I + +A + EM Q I PN+ S L+ A + ++V A
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA 690
Query: 499 VLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCC 558
V + + + Y+ + G+ KA L + + R + Y L+ S C
Sbjct: 691 VSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLC 744
Query: 559 RLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFN-MMKMSGCS--- 614
+ A G L +M+D VI K G EA S + MM+M+
Sbjct: 745 KKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVA 804
Query: 615 ----PDVITYTAMLHAYNTAEDWE 634
P+ H N +W+
Sbjct: 805 NKVDPNARDIHQKKHNKNGGNNWQ 828
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 133/304 (43%), Gaps = 18/304 (5%)
Query: 499 VLLAAEMRDIKLNTVAYNSAIGSYMNVGEYEKAIALYKCMKKR--KVMPDSVTYTVLISS 556
++L++ ++ KL+++ S + + +KA ++ ++ R + P Y +L+ S
Sbjct: 64 LILSSSIQKTKLSSLL--SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLES 121
Query: 557 CCRLSRYSEALGFLDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPD 616
C + R +M+ I ++ +I A + A +F+ M GC P+
Sbjct: 122 CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPN 181
Query: 617 VITYTAMLHAYNTAEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAE 676
T+ ++ Y A +K L ME+ + P+ + + ++ +F + G+ + E
Sbjct: 182 EFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE 241
Query: 677 FMREQDITFSDSIFFEMVLACSLLRDWKT--TIDLIKQMEPSFHVVSIGL-------LNQ 727
MRE+ + D + F ++ +L ++ K + ME + +GL N
Sbjct: 242 KMREEGLV-PDIVTFNSRIS-ALCKEGKVLDASRIFSDMELDEY---LGLPRPNSITYNL 296
Query: 728 LLHLLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYIEVLQWMEDAG 787
+L K G +E LF I + A+ +Y+I L+ L+ G + + VL+ M D G
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 788 IQPS 791
I PS
Sbjct: 357 IGPS 360
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 300,040,334
Number of Sequences: 539616
Number of extensions: 12282754
Number of successful extensions: 46737
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 29819
Number of HSP's gapped (non-prelim): 3764
length of query: 846
length of database: 191,569,459
effective HSP length: 126
effective length of query: 720
effective length of database: 123,577,843
effective search space: 88976046960
effective search space used: 88976046960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)